locus-tag class description DJY80_00005 PF11638 DnaA N-terminal domain DJY80_00005 PF00308 Bacterial dnaA protein DJY80_00005 PF08299 Bacterial dnaA protein helix-turn-helix DJY80_00010 PF02767 DNA polymerase III beta subunit, central domain DJY80_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DJY80_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DJY80_00015 PF02463 RecF/RecN/SMC N terminal domain DJY80_00020 PF00204 DNA gyrase B DJY80_00020 PF00986 DNA gyrase B subunit, carboxyl terminus DJY80_00020 PF01751 Toprim domain DJY80_00020 PF18053 DNA gyrase B subunit insert domain DJY80_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_00045 PF02423 Ornithine cyclodeaminase/mu-crystallin family DJY80_00050 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_00050 PF13291 ACT domain DJY80_00065 PF07119 Protein of unknown function (DUF1375) DJY80_00070 PF00011 Hsp20/alpha crystallin family DJY80_00075 PF00011 Hsp20/alpha crystallin family DJY80_00080 PF02080 TrkA-C domain DJY80_00080 PF06826 Predicted Permease Membrane Region DJY80_00085 PF00155 Aminotransferase class I and II DJY80_00105 PF00128 Alpha amylase, catalytic domain DJY80_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_00125 PF00691 OmpA family DJY80_00125 PF13488 Glycine zipper DJY80_00135 PF03352 Methyladenine glycosylase DJY80_00140 PF02091 Glycyl-tRNA synthetase alpha subunit DJY80_00145 PF02092 Glycyl-tRNA synthetase beta subunit DJY80_00145 PF05746 DALR anticodon binding domain DJY80_00155 PF11254 Protein of unknown function (DUF3053) DJY80_00160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJY80_00160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJY80_00160 PF02378 Phosphotransferase system, EIIC DJY80_00165 PF01232 Mannitol dehydrogenase Rossmann domain DJY80_00165 PF08125 Mannitol dehydrogenase C-terminal domain DJY80_00170 PF05068 Mannitol repressor DJY80_00175 PF10928 Protein of unknown function (DUF2810) DJY80_00190 PF02203 Tar ligand binding domain homologue DJY80_00190 PF00672 HAMP domain DJY80_00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_00195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJY80_00195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJY80_00200 PF02634 FdhD/NarQ family DJY80_00210 PF13247 4Fe-4S dicluster domain DJY80_00210 PF09163 Formate dehydrogenase N, transmembrane DJY80_00215 PF01292 Prokaryotic cytochrome b561 DJY80_00220 PF04216 Protein involved in formate dehydrogenase formation DJY80_00225 PF03841 L-seryl-tRNA selenium transferase DJY80_00225 PF12390 Selenocysteine synthase N terminal DJY80_00230 PF09107 Elongation factor SelB, winged helix DJY80_00230 PF03144 Elongation factor Tu domain 2 DJY80_00230 PF09106 Elongation factor SelB, winged helix DJY80_00230 PF00009 Elongation factor Tu GTP binding domain DJY80_00255 PF07690 Major Facilitator Superfamily DJY80_00300 PF17871 AAA lid domain DJY80_00300 PF07724 AAA domain (Cdc48 subfamily) DJY80_00300 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_00300 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_00335 PF04717 Type VI secretion system, phage-baseplate injector DJY80_00350 PF14220 Domain of unknown function (DUF4329) DJY80_00350 PF05593 RHS Repeat DJY80_00350 PF03527 RHS protein DJY80_00380 PF04717 Type VI secretion system, phage-baseplate injector DJY80_00415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJY80_00415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJY80_00420 PF02311 AraC-like ligand binding domain DJY80_00420 PF12833 Helix-turn-helix domain DJY80_00425 PF05025 RbsD / FucU transport protein family DJY80_00430 PF00294 pfkB family carbohydrate kinase DJY80_00440 PF03358 NADPH-dependent FMN reductase DJY80_00445 PF09084 NMT1/THI5 like DJY80_00450 PF00296 Luciferase-like monooxygenase DJY80_00455 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_00460 PF00005 ABC transporter DJY80_00470 PF04221 RelB antitoxin DJY80_00475 PF00860 Permease family DJY80_00480 PF00999 Sodium/hydrogen exchanger family DJY80_00490 PF03279 Bacterial lipid A biosynthesis acyltransferase DJY80_00500 PF00005 ABC transporter DJY80_00505 PF02653 Branched-chain amino acid transport system / permease component DJY80_00515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_00515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_00520 PF00571 CBS domain DJY80_00520 PF01380 SIS domain DJY80_00525 PF02798 Glutathione S-transferase, N-terminal domain DJY80_00540 PF01797 Transposase IS200 like DJY80_00545 PF00313 'Cold-shock' DNA-binding domain DJY80_00550 PF00313 'Cold-shock' DNA-binding domain DJY80_00560 PF05433 Glycine zipper 2TM domain DJY80_00565 PF00753 Metallo-beta-lactamase superfamily DJY80_00570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJY80_00570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJY80_00575 PF02627 Carboxymuconolactone decarboxylase family DJY80_00580 PF07690 Major Facilitator Superfamily DJY80_00605 PF02954 Bacterial regulatory protein, Fis family DJY80_00610 PF01207 Dihydrouridine synthase (Dus) DJY80_00620 PF00474 Sodium:solute symporter family DJY80_00625 PF06196 Protein of unknown function (DUF997) DJY80_00630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJY80_00630 PF00289 Biotin carboxylase, N-terminal domain DJY80_00630 PF02785 Biotin carboxylase C-terminal domain DJY80_00635 PF00364 Biotin-requiring enzyme DJY80_00640 PF01220 Dehydroquinase class II DJY80_00645 PF01794 Ferric reductase like transmembrane component DJY80_00650 PF00174 Oxidoreductase molybdopterin binding domain DJY80_00655 PF00107 Zinc-binding dehydrogenase DJY80_00655 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_00660 PF00990 Diguanylate cyclase, GGDEF domain DJY80_00660 PF17157 Gammaproteobacterial periplasmic sensor domain DJY80_00660 PF00563 EAL domain DJY80_00670 PF04085 rod shape-determining protein MreC DJY80_00675 PF04093 rod shape-determining protein MreD DJY80_00680 PF02545 Maf-like protein DJY80_00685 PF00575 S1 RNA binding domain DJY80_00685 PF10150 Ribonuclease E/G family DJY80_00690 PF13116 Protein of unknown function DJY80_00690 PF13502 AsmA-like C-terminal region DJY80_00695 PF00795 Carbon-nitrogen hydrolase DJY80_00700 PF01523 Putative modulator of DNA gyrase DJY80_00710 PF14431 YwqJ-like deaminase DJY80_00710 PF18807 Tripartite Tc toxins repeat DJY80_00715 PF18807 Tripartite Tc toxins repeat DJY80_00715 PF05785 Rho-activating domain of cytotoxic necrotizing factor DJY80_00735 PF12256 Insecticide toxin TcdB middle/N-terminal region DJY80_00735 PF12255 Insecticide toxin TcdB middle/C-terminal region DJY80_00735 PF03534 Salmonella virulence plasmid 65kDa B protein DJY80_00745 PF01695 IstB-like ATP binding protein DJY80_00750 PF02796 Helix-turn-helix domain of resolvase DJY80_00750 PF00665 Integrase core domain DJY80_00755 PF18413 Neuraminidase-like domain DJY80_00755 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DJY80_00765 PF03466 LysR substrate binding domain DJY80_00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_00770 PF03466 LysR substrate binding domain DJY80_00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_00775 PF07869 Protein of unknown function (DUF1656) DJY80_00780 PF13533 Biotin-lipoyl like DJY80_00785 PF04632 Fusaric acid resistance protein family DJY80_00800 PF01337 Barstar (barnase inhibitor) DJY80_00805 PF04751 Protein of unknown function (DUF615) DJY80_00810 PF01523 Putative modulator of DNA gyrase DJY80_00820 PF07361 Cytochrome b562 DJY80_00825 PF14760 Rnk N-terminus DJY80_00825 PF01272 Transcription elongation factor, GreA/GreB, C-term DJY80_00830 PF00128 Alpha amylase, catalytic domain DJY80_00830 PF11941 Domain of unknown function (DUF3459) DJY80_00835 PF00367 phosphotransferase system, EIIB DJY80_00835 PF02378 Phosphotransferase system, EIIC DJY80_00840 PF00356 Bacterial regulatory proteins, lacI family DJY80_00850 PF01042 Endoribonuclease L-PSP DJY80_00855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DJY80_00855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DJY80_00860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJY80_00860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJY80_00870 PF00381 PTS HPr component phosphorylation site DJY80_00875 PF03668 P-loop ATPase protein family DJY80_00885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJY80_00895 PF04552 Sigma-54, DNA binding domain DJY80_00895 PF04963 Sigma-54 factor, core binding domain DJY80_00895 PF00309 Sigma-54 factor, Activator interacting domain (AID) DJY80_00900 PF00005 ABC transporter DJY80_00900 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJY80_00905 PF03968 OstA-like protein DJY80_00910 PF06835 Lipopolysaccharide-assembly, LptC-related DJY80_00920 PF01380 SIS domain DJY80_00920 PF00571 CBS domain DJY80_00925 PF01699 Sodium/calcium exchanger protein DJY80_00930 PF00005 ABC transporter DJY80_00935 PF02405 Permease MlaE DJY80_00940 PF02470 MlaD protein DJY80_00945 PF05494 MlaC protein DJY80_00950 PF13466 STAS domain DJY80_00955 PF01722 BolA-like protein DJY80_00960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJY80_00965 PF13180 PDZ domain DJY80_00970 PF01797 Transposase IS200 like DJY80_00975 PF13180 PDZ domain DJY80_00975 PF00595 PDZ domain DJY80_00980 PF06295 Protein of unknown function (DUF1043) DJY80_00985 PF03969 AFG1-like ATPase DJY80_00990 PF00572 Ribosomal protein L13 DJY80_00995 PF00380 Ribosomal protein S9/S16 DJY80_01005 PF02798 Glutathione S-transferase, N-terminal domain DJY80_01005 PF00043 Glutathione S-transferase, C-terminal domain DJY80_01010 PF04386 Stringent starvation protein B DJY80_01020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DJY80_01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_01025 PF01645 Conserved region in glutamate synthase DJY80_01025 PF04898 Glutamate synthase central domain DJY80_01025 PF00310 Glutamine amidotransferases class-II DJY80_01025 PF01493 GXGXG motif DJY80_01030 PF16199 Radical_SAM C-terminal domain DJY80_01030 PF04055 Radical SAM superfamily DJY80_01040 PF00512 His Kinase A (phospho-acceptor) domain DJY80_01040 PF00989 PAS fold DJY80_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_01040 PF01627 Hpt domain DJY80_01040 PF18415 Histidine kinase receptor ArcB trans-membrane domain DJY80_01040 PF00072 Response regulator receiver domain DJY80_01055 PF00912 Transglycosylase DJY80_01060 PF04972 BON domain DJY80_01065 PF13580 SIS domain DJY80_01070 PF02021 Uncharacterised protein family UPF0102 DJY80_01080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJY80_01090 PF02678 Pirin DJY80_01090 PF17954 Quercetinase C-terminal cupin domain DJY80_01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_01095 PF03466 LysR substrate binding domain DJY80_01105 PF01695 IstB-like ATP binding protein DJY80_01110 PF02796 Helix-turn-helix domain of resolvase DJY80_01110 PF00665 Integrase core domain DJY80_01155 PF13407 Periplasmic binding protein domain DJY80_01160 PF00005 ABC transporter DJY80_01165 PF02653 Branched-chain amino acid transport system / permease component DJY80_01170 PF02653 Branched-chain amino acid transport system / permease component DJY80_01175 PF03466 LysR substrate binding domain DJY80_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_01180 PF04219 Protein of unknown function, DUF DJY80_01185 PF01078 Magnesium chelatase, subunit ChlI DJY80_01185 PF13335 Magnesium chelatase, subunit ChlI C-terminal DJY80_01195 PF08046 IlvGEDA operon leader peptide DJY80_01200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_01200 PF00205 Thiamine pyrophosphate enzyme, central domain DJY80_01200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_01210 PF01063 Amino-transferase class IV DJY80_01215 PF00920 Dehydratase family DJY80_01220 PF00585 C-terminal regulatory domain of Threonine dehydratase DJY80_01220 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_01250 PF03466 LysR substrate binding domain DJY80_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_01255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJY80_01255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJY80_01285 PF01320 Colicin immunity protein / pyocin immunity protein DJY80_01290 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_01290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_01300 PF00577 Outer membrane usher protein DJY80_01300 PF13953 PapC C-terminal domain DJY80_01300 PF13954 PapC N-terminal domain DJY80_01305 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_01305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_01320 PF00872 Transposase, Mutator family DJY80_01340 PF13361 UvrD-like helicase C-terminal domain DJY80_01340 PF00580 UvrD/REP helicase N-terminal domain DJY80_01350 PF00270 DEAD/DEAH box helicase DJY80_01350 PF00271 Helicase conserved C-terminal domain DJY80_01355 PF00085 Thioredoxin DJY80_01360 PF07498 Rho termination factor, N-terminal domain DJY80_01360 PF07497 Rho termination factor, RNA-binding domain DJY80_01360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_01365 PF00953 Glycosyl transferase family 4 DJY80_01370 PF02706 Chain length determinant protein DJY80_01375 PF02350 UDP-N-acetylglucosamine 2-epimerase DJY80_01380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJY80_01380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJY80_01380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJY80_01385 PF16363 GDP-mannose 4,6 dehydratase DJY80_01390 PF00483 Nucleotidyl transferase DJY80_01400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJY80_01405 PF01943 Polysaccharide biosynthesis protein DJY80_01410 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DJY80_01415 PF06899 WzyE protein, O-antigen assembly polymerase DJY80_01420 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJY80_01425 PF00324 Amino acid permease DJY80_01450 PF01797 Transposase IS200 like DJY80_01460 PF07219 HemY protein N-terminus DJY80_01460 PF07719 Tetratricopeptide repeat DJY80_01465 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DJY80_01470 PF02602 Uroporphyrinogen-III synthase HemD DJY80_01475 PF03900 Porphobilinogen deaminase, C-terminal domain DJY80_01475 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DJY80_01485 PF01295 Adenylate cyclase, class-I DJY80_01485 PF12633 Adenylate cyclase NT domain DJY80_01490 PF01491 Frataxin-like domain DJY80_01495 PF13627 Prokaryotic lipoprotein-attachment site DJY80_01500 PF01678 Diaminopimelate epimerase DJY80_01505 PF04340 Protein of unknown function, DUF484 DJY80_01510 PF02899 Phage integrase, N-terminal SAM-like domain DJY80_01510 PF00589 Phage integrase family DJY80_01515 PF13419 Haloacid dehalogenase-like hydrolase DJY80_01520 PF13361 UvrD-like helicase C-terminal domain DJY80_01520 PF00580 UvrD/REP helicase N-terminal domain DJY80_01535 PF09370 Phosphoenolpyruvate hydrolase-like DJY80_01540 PF01544 CorA-like Mg2+ transporter protein DJY80_01545 PF00892 EamA-like transporter family DJY80_01550 PF03061 Thioesterase superfamily DJY80_01555 PF02253 Phospholipase A1 DJY80_01560 PF09382 RQC domain DJY80_01560 PF16124 RecQ zinc-binding DJY80_01560 PF00570 HRDC domain DJY80_01560 PF00271 Helicase conserved C-terminal domain DJY80_01560 PF00270 DEAD/DEAH box helicase DJY80_01565 PF01810 LysE type translocator DJY80_01570 PF01810 LysE type translocator DJY80_01575 PF12146 Serine aminopeptidase, S33 DJY80_01590 PF03009 Glycerophosphoryl diester phosphodiesterase family DJY80_01605 PF01266 FAD dependent oxidoreductase DJY80_01605 PF04324 BFD-like [2Fe-2S] binding domain DJY80_01610 PF00890 FAD binding domain DJY80_01615 PF02754 Cysteine-rich domain DJY80_01615 PF13183 4Fe-4S dicluster domain DJY80_01620 PF08786 DcrB DJY80_01625 PF02592 Putative vitamin uptake transporter DJY80_01630 PF01206 Sulfurtransferase TusA DJY80_01635 PF00403 Heavy-metal-associated domain DJY80_01640 PF07947 YhhN family DJY80_01655 PF06611 Protein of unknown function (DUF1145) DJY80_01670 PF00448 SRP54-type protein, GTPase domain DJY80_01670 PF02881 SRP54-type protein, helical bundle domain DJY80_01670 PF00448 SRP54-type protein, GTPase domain DJY80_01670 PF02881 SRP54-type protein, helical bundle domain DJY80_01675 PF00005 ABC transporter DJY80_01680 PF18075 FtsX extracellular domain DJY80_01680 PF02687 FtsX-like permease family DJY80_01685 PF04545 Sigma-70, region 4 DJY80_01685 PF04542 Sigma-70 region 2 DJY80_01685 PF00140 Sigma-70 factor, region 1.2 DJY80_01690 PF01797 Transposase IS200 like DJY80_01695 PF12568 Acetyltransferase (GNAT) domain, PanZ DJY80_01700 PF13458 Periplasmic binding protein DJY80_01705 PF02653 Branched-chain amino acid transport system / permease component DJY80_01710 PF02653 Branched-chain amino acid transport system / permease component DJY80_01710 PF11862 Domain of unknown function (DUF3382) DJY80_01715 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJY80_01715 PF00005 ABC transporter DJY80_01720 PF00005 ABC transporter DJY80_01760 PF13416 Bacterial extracellular solute-binding protein DJY80_01765 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_01770 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_01775 PF17912 MalK OB fold domain DJY80_01775 PF00005 ABC transporter DJY80_01780 PF03009 Glycerophosphoryl diester phosphodiesterase family DJY80_01785 PF03547 Membrane transport protein DJY80_01790 PF00892 EamA-like transporter family DJY80_01795 PF03466 LysR substrate binding domain DJY80_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_01800 PF01717 Cobalamin-independent synthase, Catalytic domain DJY80_01800 PF08267 Cobalamin-independent synthase, N-terminal domain DJY80_01805 PF01738 Dienelactone hydrolase family DJY80_01810 PF01048 Phosphorylase superfamily DJY80_01820 PF13722 5TM C-terminal transporter carbon starvation CstA DJY80_01820 PF02554 Carbon starvation protein CstA DJY80_01825 PF09335 SNARE associated Golgi protein DJY80_01830 PF02646 RmuC family DJY80_01835 PF01209 ubiE/COQ5 methyltransferase family DJY80_01840 PF02036 SCP-2 sterol transfer family DJY80_01845 PF03109 ABC1 family DJY80_01850 PF02416 mttA/Hcf106 family DJY80_01860 PF00902 Sec-independent protein translocase protein (TatC) DJY80_01870 PF00665 Integrase core domain DJY80_01870 PF02796 Helix-turn-helix domain of resolvase DJY80_01875 PF01695 IstB-like ATP binding protein DJY80_01880 PF01026 TatD related DNase DJY80_01885 PF00490 Delta-aminolevulinic acid dehydratase DJY80_01890 PF02357 Transcription termination factor nusG DJY80_01895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DJY80_01900 PF00175 Oxidoreductase NAD-binding domain DJY80_01900 PF00970 Oxidoreductase FAD-binding domain DJY80_01905 PF02803 Thiolase, C-terminal domain DJY80_01905 PF00108 Thiolase, N-terminal domain DJY80_01910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJY80_01910 PF00378 Enoyl-CoA hydratase/isomerase DJY80_01910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJY80_01915 PF00557 Metallopeptidase family M24 DJY80_01925 PF01797 Transposase IS200 like DJY80_01935 PF02386 Cation transport protein DJY80_01940 PF12724 Flavodoxin domain DJY80_01975 PF01565 FAD binding domain DJY80_01975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJY80_01980 PF02237 Biotin protein ligase C terminal domain DJY80_01980 PF03099 Biotin/lipoate A/B protein ligase family DJY80_01980 PF08279 HTH domain DJY80_01985 PF00485 Phosphoribulokinase / Uridine kinase family DJY80_01990 PF13673 Acetyltransferase (GNAT) domain DJY80_01995 PF02796 Helix-turn-helix domain of resolvase DJY80_01995 PF00665 Integrase core domain DJY80_02000 PF01695 IstB-like ATP binding protein DJY80_02025 PF00009 Elongation factor Tu GTP binding domain DJY80_02025 PF03143 Elongation factor Tu C-terminal domain DJY80_02025 PF03144 Elongation factor Tu domain 2 DJY80_02030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DJY80_02035 PF02357 Transcription termination factor nusG DJY80_02035 PF00467 KOW motif DJY80_02040 PF03946 Ribosomal protein L11, N-terminal domain DJY80_02040 PF00298 Ribosomal protein L11, RNA binding domain DJY80_02045 PF00687 Ribosomal protein L1p/L10e family DJY80_02050 PF00466 Ribosomal protein L10 DJY80_02055 PF00542 Ribosomal protein L7/L12 C-terminal domain DJY80_02055 PF16320 Ribosomal protein L7/L12 dimerisation domain DJY80_02060 PF04561 RNA polymerase Rpb2, domain 2 DJY80_02060 PF04565 RNA polymerase Rpb2, domain 3 DJY80_02060 PF10385 RNA polymerase beta subunit external 1 domain DJY80_02060 PF00562 RNA polymerase Rpb2, domain 6 DJY80_02060 PF04560 RNA polymerase Rpb2, domain 7 DJY80_02060 PF04563 RNA polymerase beta subunit DJY80_02065 PF05000 RNA polymerase Rpb1, domain 4 DJY80_02065 PF04998 RNA polymerase Rpb1, domain 5 DJY80_02065 PF04983 RNA polymerase Rpb1, domain 3 DJY80_02065 PF00623 RNA polymerase Rpb1, domain 2 DJY80_02065 PF04997 RNA polymerase Rpb1, domain 1 DJY80_02070 PF01797 Transposase IS200 like DJY80_02080 PF06968 Biotin and Thiamin Synthesis associated domain DJY80_02080 PF04055 Radical SAM superfamily DJY80_02085 PF05690 Thiazole biosynthesis protein ThiG DJY80_02095 PF00899 ThiF family DJY80_02100 PF02581 Thiamine monophosphate synthase DJY80_02105 PF01964 Radical SAM ThiC family DJY80_02105 PF13667 ThiC-associated domain DJY80_02110 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DJY80_02115 PF00293 NUDIX domain DJY80_02115 PF09297 NADH pyrophosphatase zinc ribbon domain DJY80_02125 PF01208 Uroporphyrinogen decarboxylase (URO-D) DJY80_02130 PF04493 Endonuclease V DJY80_02135 PF04222 Protein of unknown function (DUF416) DJY80_02140 PF00216 Bacterial DNA-binding protein DJY80_02145 PF07356 Protein of unknown function (DUF1481) DJY80_02150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DJY80_02150 PF02843 Phosphoribosylglycinamide synthetase, C domain DJY80_02150 PF02844 Phosphoribosylglycinamide synthetase, N domain DJY80_02155 PF02142 MGS-like domain DJY80_02155 PF01808 AICARFT/IMPCHase bienzyme DJY80_02200 PF01367 5'-3' exonuclease, C-terminal SAM fold DJY80_02200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJY80_02205 PF01695 IstB-like ATP binding protein DJY80_02210 PF02796 Helix-turn-helix domain of resolvase DJY80_02210 PF00665 Integrase core domain DJY80_02220 PF00474 Sodium:solute symporter family DJY80_02225 PF04341 Protein of unknown function, DUF485 DJY80_02230 PF16177 Acetyl-coenzyme A synthetase N-terminus DJY80_02230 PF00501 AMP-binding enzyme DJY80_02230 PF13193 AMP-binding enzyme C-terminal domain DJY80_02235 PF00375 Sodium:dicarboxylate symporter family DJY80_02240 PF00196 Bacterial regulatory proteins, luxR family DJY80_02240 PF00072 Response regulator receiver domain DJY80_02245 PF00072 Response regulator receiver domain DJY80_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_02245 PF01627 Hpt domain DJY80_02245 PF00672 HAMP domain DJY80_02245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJY80_02245 PF00512 His Kinase A (phospho-acceptor) domain DJY80_02285 PF01514 Secretory protein of YscJ/FliF family DJY80_02300 PF00771 FHIPEP family DJY80_02305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_02305 PF18269 T3SS EscN ATPase C-terminal domain DJY80_02320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJY80_02325 PF00813 FliP family DJY80_02330 PF01313 Bacterial export proteins, family 3 DJY80_02335 PF01311 Bacterial export proteins, family 1 DJY80_02340 PF01312 FlhB HrpN YscU SpaS Family DJY80_02345 PF04143 Sulphur transport DJY80_02350 PF01206 Sulfurtransferase TusA DJY80_02355 PF03466 LysR substrate binding domain DJY80_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_02360 PF03222 Tryptophan/tyrosine permease family DJY80_02365 PF01053 Cys/Met metabolism PLP-dependent enzyme DJY80_02370 PF00005 ABC transporter DJY80_02375 PF01032 FecCD transport family DJY80_02380 PF01497 Periplasmic binding protein DJY80_02385 PF05171 Haemin-degrading HemS.ChuX domain DJY80_02390 PF00593 TonB dependent receptor DJY80_02390 PF07715 TonB-dependent Receptor Plug Domain DJY80_02400 PF13460 NAD(P)H-binding DJY80_02405 PF06228 Haem utilisation ChuX/HutX DJY80_02410 PF04055 Radical SAM superfamily DJY80_02430 PF15608 PELOTA RNA binding domain DJY80_02430 PF11202 Phosphoribosyl transferase (PRTase) DJY80_02450 PF02342 TerD domain DJY80_02455 PF02342 TerD domain DJY80_02460 PF05099 Tellurite resistance protein TerB DJY80_02465 PF03741 Integral membrane protein TerC family DJY80_02470 PF02342 TerD domain DJY80_02475 PF02342 TerD domain DJY80_02485 PF13954 PapC N-terminal domain DJY80_02485 PF13953 PapC C-terminal domain DJY80_02485 PF00577 Outer membrane usher protein DJY80_02490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_02520 PF08031 Berberine and berberine like DJY80_02520 PF01565 FAD binding domain DJY80_02530 PF04345 Chorismate lyase DJY80_02535 PF01040 UbiA prenyltransferase family DJY80_02540 PF01553 Acyltransferase DJY80_02545 PF01219 Prokaryotic diacylglycerol kinase DJY80_02550 PF00717 Peptidase S24-like DJY80_02550 PF01726 LexA DNA binding domain DJY80_02555 PF01475 Ferric uptake regulator family DJY80_02560 PF01207 Dihydrouridine synthase (Dus) DJY80_02565 PF09583 Phage shock protein G (Phageshock_PspG) DJY80_02570 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_02570 PF00107 Zinc-binding dehydrogenase DJY80_02575 PF03796 DnaB-like helicase C terminal domain DJY80_02575 PF00772 DnaB-like helicase N terminal domain DJY80_02580 PF00842 Alanine racemase, C-terminal domain DJY80_02580 PF01168 Alanine racemase, N-terminal domain DJY80_02585 PF00155 Aminotransferase class I and II DJY80_02590 PF04237 YjbR DJY80_02595 PF17755 UvrA DNA-binding domain DJY80_02595 PF17760 UvrA interaction domain DJY80_02595 PF00005 ABC transporter DJY80_02600 PF00436 Single-strand binding protein family DJY80_02605 PF05336 L-rhamnose mutarotase DJY80_02610 PF00465 Iron-containing alcohol dehydrogenase DJY80_02615 PF00596 Class II Aldolase and Adducin N-terminal domain DJY80_02620 PF06134 L-rhamnose isomerase (RhaA) DJY80_02625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_02625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_02635 PF02311 AraC-like ligand binding domain DJY80_02635 PF12833 Helix-turn-helix domain DJY80_02640 PF12833 Helix-turn-helix domain DJY80_02640 PF02311 AraC-like ligand binding domain DJY80_02645 PF06379 L-rhamnose-proton symport protein (RhaT) DJY80_02690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DJY80_02690 PF13247 4Fe-4S dicluster domain DJY80_02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_02695 PF13247 4Fe-4S dicluster domain DJY80_02695 PF12800 4Fe-4S binding domain DJY80_02700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJY80_02700 PF01568 Molydopterin dinucleotide binding domain DJY80_02700 PF00384 Molybdopterin oxidoreductase DJY80_02705 PF02683 Cytochrome C biogenesis protein transmembrane region DJY80_02705 PF11412 Disulphide bond corrector protein DsbC DJY80_02710 PF03091 CutA1 divalent ion tolerance protein DJY80_02715 PF03605 Anaerobic c4-dicarboxylate membrane transporter DJY80_02720 PF10415 Fumarase C C-terminus DJY80_02720 PF00206 Lyase DJY80_02725 PF04186 FxsA cytoplasmic membrane protein DJY80_02730 PF00166 Chaperonin 10 Kd subunit DJY80_02735 PF00118 TCP-1/cpn60 chaperonin family DJY80_02745 PF13698 Domain of unknown function (DUF4156) DJY80_02750 PF04055 Radical SAM superfamily DJY80_02755 PF09285 Elongation factor P, C-terminal DJY80_02755 PF08207 Elongation factor P (EF-P) KOW-like domain DJY80_02755 PF01132 Elongation factor P (EF-P) OB domain DJY80_02760 PF00893 Small Multidrug Resistance protein DJY80_02765 PF02313 Fumarate reductase subunit D DJY80_02770 PF02300 Fumarate reductase subunit C DJY80_02775 PF13183 4Fe-4S dicluster domain DJY80_02775 PF13085 2Fe-2S iron-sulfur cluster binding domain DJY80_02780 PF02910 Fumarate reductase flavoprotein C-term DJY80_02780 PF00890 FAD binding domain DJY80_02790 PF00152 tRNA synthetases class II (D, K and N) DJY80_02795 PF12795 Mechanosensitive ion channel porin domain DJY80_02795 PF00924 Mechanosensitive ion channel DJY80_02795 PF12794 Mechanosensitive ion channel inner membrane domain 1 DJY80_02800 PF02666 Phosphatidylserine decarboxylase DJY80_02805 PF03193 RsgA GTPase DJY80_02815 PF00929 Exonuclease DJY80_02835 PF08331 Domain of unknown function (DUF1730) DJY80_02840 PF03853 YjeF-related protein N-terminus DJY80_02840 PF01256 Carbohydrate kinase DJY80_02845 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DJY80_02850 PF01520 N-acetylmuramoyl-L-alanine amidase DJY80_02855 PF08676 MutL C terminal dimerisation domain DJY80_02855 PF01119 DNA mismatch repair protein, C-terminal domain DJY80_02865 PF17209 Hfq protein DJY80_02870 PF16360 GTP-binding GTPase Middle Region DJY80_02870 PF01926 50S ribosome-binding GTPase DJY80_02870 PF13167 GTP-binding GTPase N-terminal DJY80_02875 PF01145 SPFH domain / Band 7 family DJY80_02875 PF12221 Bacterial membrane protein N terminal DJY80_02880 PF01145 SPFH domain / Band 7 family DJY80_02885 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DJY80_02890 PF00709 Adenylosuccinate synthetase DJY80_02895 PF02082 Transcriptional regulator DJY80_02900 PF00575 S1 RNA binding domain DJY80_02900 PF00773 RNB domain DJY80_02900 PF08461 Ribonuclease R winged-helix domain DJY80_02900 PF17876 Cold shock domain DJY80_02900 PF08206 Ribonuclease B OB domain DJY80_02905 PF00588 SpoU rRNA Methylase family DJY80_02905 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJY80_02910 PF18158 Adaptive response protein AidB N-terminal domain DJY80_02910 PF02770 Acyl-CoA dehydrogenase, middle domain DJY80_02910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJY80_02915 PF07338 Protein of unknown function (DUF1471) DJY80_02925 PF01695 IstB-like ATP binding protein DJY80_02930 PF02796 Helix-turn-helix domain of resolvase DJY80_02930 PF00665 Integrase core domain DJY80_02935 PF00326 Prolyl oligopeptidase family DJY80_02945 PF01250 Ribosomal protein S6 DJY80_02950 PF00436 Single-strand binding protein family DJY80_02955 PF01084 Ribosomal protein S18 DJY80_02960 PF01281 Ribosomal protein L9, N-terminal domain DJY80_02960 PF03948 Ribosomal protein L9, C-terminal domain DJY80_02965 PF01797 Transposase IS200 like DJY80_02975 PF04225 Opacity-associated protein A LysM-like domain DJY80_02975 PF08525 Opacity-associated protein A N-terminal motif DJY80_02980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJY80_02980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DJY80_02985 PF01814 Hemerythrin HHE cation binding domain DJY80_02985 PF04405 Domain of Unknown function (DUF542) DJY80_02990 PF02872 5'-nucleotidase, C-terminal domain DJY80_02990 PF00149 Calcineurin-like phosphoesterase DJY80_02995 PF00459 Inositol monophosphatase family DJY80_03000 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DJY80_03005 PF06526 Protein of unknown function (DUF1107) DJY80_03010 PF03471 Transporter associated domain DJY80_03010 PF01595 Cyclin M transmembrane N-terminal domain DJY80_03010 PF00571 CBS domain DJY80_03015 PF01625 Peptide methionine sulfoxide reductase DJY80_03020 PF17243 POTRA domain TamA domain 1 DJY80_03020 PF07244 Surface antigen variable number repeat DJY80_03020 PF01103 Surface antigen DJY80_03025 PF04357 TamB, inner membrane protein subunit of TAM complex DJY80_03030 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DJY80_03035 PF00719 Inorganic pyrophosphatase DJY80_03040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DJY80_03045 PF01225 Mur ligase family, catalytic domain DJY80_03045 PF02875 Mur ligase family, glutamate ligase domain DJY80_03045 PF08245 Mur ligase middle domain DJY80_03055 PF02863 Arginine repressor, C-terminal domain DJY80_03055 PF01316 Arginine repressor, DNA binding domain DJY80_03060 PF00056 lactate/malate dehydrogenase, NAD binding domain DJY80_03060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJY80_03070 PF13693 Winged helix-turn-helix DNA-binding DJY80_03080 PF00348 Polyprenyl synthetase DJY80_03085 PF00829 Ribosomal prokaryotic L21 protein DJY80_03090 PF01016 Ribosomal L27 protein DJY80_03095 PF00892 EamA-like transporter family DJY80_03100 PF01018 GTP1/OBG DJY80_03100 PF01926 50S ribosome-binding GTPase DJY80_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_03105 PF00672 HAMP domain DJY80_03105 PF00512 His Kinase A (phospho-acceptor) domain DJY80_03110 PF00486 Transcriptional regulatory protein, C terminal DJY80_03110 PF00072 Response regulator receiver domain DJY80_03115 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DJY80_03120 PF01272 Transcription elongation factor, GreA/GreB, C-term DJY80_03120 PF03449 Transcription elongation factor, N-terminal DJY80_03125 PF01985 CRS1 / YhbY (CRM) domain DJY80_03130 PF01728 FtsJ-like methyltransferase DJY80_03135 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_03135 PF17862 AAA+ lid domain DJY80_03135 PF01434 Peptidase family M41 DJY80_03135 PF06480 FtsH Extracellular DJY80_03140 PF00809 Pterin binding enzyme DJY80_03145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJY80_03145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJY80_03145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJY80_03145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJY80_03150 PF03840 Preprotein translocase SecG subunit DJY80_03165 PF17384 RimP C-terminal SH3 domain DJY80_03165 PF02576 RimP N-terminal domain DJY80_03170 PF13184 NusA-like KH domain DJY80_03170 PF00575 S1 RNA binding domain DJY80_03170 PF08529 NusA N-terminal domain DJY80_03175 PF03144 Elongation factor Tu domain 2 DJY80_03175 PF11987 Translation-initiation factor 2 DJY80_03175 PF04760 Translation initiation factor IF-2, N-terminal region DJY80_03175 PF00009 Elongation factor Tu GTP binding domain DJY80_03175 PF08364 Bacterial translation initiation factor IF-2 associated region DJY80_03180 PF02033 Ribosome-binding factor A DJY80_03185 PF16198 tRNA pseudouridylate synthase B C-terminal domain DJY80_03185 PF01509 TruB family pseudouridylate synthase (N terminal domain) DJY80_03185 PF09157 Pseudouridine synthase II TruB, C-terminal DJY80_03190 PF00312 Ribosomal protein S15 DJY80_03200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DJY80_03200 PF01138 3' exoribonuclease family, domain 1 DJY80_03200 PF00013 KH domain DJY80_03200 PF03725 3' exoribonuclease family, domain 2 DJY80_03200 PF00575 S1 RNA binding domain DJY80_03205 PF13181 Tetratricopeptide repeat DJY80_03205 PF07719 Tetratricopeptide repeat DJY80_03215 PF00271 Helicase conserved C-terminal domain DJY80_03215 PF12343 Cold shock protein DEAD box A DJY80_03215 PF00270 DEAD/DEAH box helicase DJY80_03215 PF03880 DbpA RNA binding domain DJY80_03230 PF01381 Helix-turn-helix DJY80_03240 PF00296 Luciferase-like monooxygenase DJY80_03245 PF00529 HlyD membrane-fusion protein of T1SS DJY80_03245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_03250 PF00873 AcrB/AcrD/AcrF family DJY80_03255 PF02321 Outer membrane efflux protein DJY80_03255 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DJY80_03280 PF13508 Acetyltransferase (GNAT) domain DJY80_03285 PF01541 GIY-YIG catalytic domain DJY80_03300 PF13416 Bacterial extracellular solute-binding protein DJY80_03310 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_03315 PF00005 ABC transporter DJY80_03315 PF03459 TOBE domain DJY80_03315 PF17912 MalK OB fold domain DJY80_03330 PF13460 NAD(P)H-binding DJY80_03335 PF12706 Beta-lactamase superfamily domain DJY80_03345 PF07969 Amidohydrolase family DJY80_03350 PF00005 ABC transporter DJY80_03355 PF00005 ABC transporter DJY80_03360 PF06007 Phosphonate metabolism protein PhnJ DJY80_03365 PF05861 Bacterial phosphonate metabolism protein (PhnI) DJY80_03370 PF05845 Bacterial phosphonate metabolism protein (PhnH) DJY80_03375 PF06754 Phosphonate metabolism protein PhnG DJY80_03380 PF07702 UTRA domain DJY80_03380 PF00392 Bacterial regulatory proteins, gntR family DJY80_03390 PF03477 ATP cone domain DJY80_03390 PF13597 Anaerobic ribonucleoside-triphosphate reductase DJY80_03395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_03395 PF00005 ABC transporter DJY80_03400 PF00005 ABC transporter DJY80_03400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_03405 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_03405 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_03410 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_03420 PF04074 YhcH/YjgK/YiaL DJY80_03425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJY80_03425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJY80_03430 PF06877 Regulator of ribonuclease activity B DJY80_03435 PF00583 Acetyltransferase (GNAT) family DJY80_03440 PF08264 Anticodon-binding domain of tRNA DJY80_03440 PF00133 tRNA synthetases class I (I, L, M and V) DJY80_03440 PF10458 Valyl tRNA synthetase tRNA binding arm DJY80_03445 PF04364 DNA polymerase III chi subunit, HolC DJY80_03450 PF00883 Cytosol aminopeptidase family, catalytic domain DJY80_03450 PF02789 Cytosol aminopeptidase family, N-terminal domain DJY80_03455 PF03739 Lipopolysaccharide export system permease LptF/LptG DJY80_03460 PF03739 Lipopolysaccharide export system permease LptF/LptG DJY80_03470 PF00589 Phage integrase family DJY80_03470 PF13356 Arm DNA-binding domain DJY80_03480 PF01119 DNA mismatch repair protein, C-terminal domain DJY80_03480 PF08676 MutL C terminal dimerisation domain DJY80_03485 PF01695 IstB-like ATP binding protein DJY80_03490 PF02796 Helix-turn-helix domain of resolvase DJY80_03490 PF00665 Integrase core domain DJY80_03495 PF01797 Transposase IS200 like DJY80_03500 PF03884 DNA gyrase inhibitor YacG DJY80_03505 PF07072 Cell division protein DJY80_03510 PF01121 Dephospho-CoA kinase DJY80_03520 PF00478 IMP dehydrogenase / GMP reductase domain DJY80_03525 PF00482 Type II secretion system (T2SS), protein F DJY80_03530 PF00437 Type II/IV secretion system protein DJY80_03530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DJY80_03535 PF07963 Prokaryotic N-terminal methylation motif DJY80_03540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DJY80_03540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DJY80_03545 PF01510 N-acetylmuramoyl-L-alanine amidase DJY80_03550 PF17113 Regulatory signalling modulator protein AmpE DJY80_03555 PF00324 Amino acid permease DJY80_03565 PF07729 FCD domain DJY80_03565 PF00392 Bacterial regulatory proteins, gntR family DJY80_03570 PF00456 Transketolase, thiamine diphosphate binding domain DJY80_03570 PF17831 Pyruvate dehydrogenase E1 component middle domain DJY80_03575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJY80_03575 PF00364 Biotin-requiring enzyme DJY80_03575 PF02817 e3 binding domain DJY80_03580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJY80_03580 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_03585 PF01797 Transposase IS200 like DJY80_03590 PF06434 Aconitate hydratase 2 N-terminus DJY80_03590 PF11791 Aconitate B N-terminal domain DJY80_03590 PF00330 Aconitase family (aconitate hydratase) DJY80_03595 PF06062 Uncharacterised protein family (UPF0231) DJY80_03600 PF00892 EamA-like transporter family DJY80_03605 PF02675 S-adenosylmethionine decarboxylase DJY80_03610 PF17284 Spermidine synthase tetramerisation domain DJY80_03615 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) DJY80_03620 PF07731 Multicopper oxidase DJY80_03620 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJY80_03620 PF07732 Multicopper oxidase DJY80_03620 PF00394 Multicopper oxidase DJY80_03625 PF00156 Phosphoribosyl transferase domain DJY80_03630 PF00484 Carbonic anhydrase DJY80_03635 PF00005 ABC transporter DJY80_03640 PF01061 ABC-2 type transporter DJY80_03650 PF02261 Aspartate decarboxylase DJY80_03655 PF02569 Pantoate-beta-alanine ligase DJY80_03660 PF02548 Ketopantoate hydroxymethyltransferase DJY80_03665 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DJY80_03670 PF01743 Poly A polymerase head domain DJY80_03670 PF12627 Probable RNA and SrmB- binding site of polymerase A DJY80_03670 PF12626 Polymerase A arginine-rich C-terminus DJY80_03675 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJY80_03685 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJY80_03690 PF17746 SfsA N-terminal OB domain DJY80_03690 PF03749 Sugar fermentation stimulation protein RE domain DJY80_03695 PF02834 LigT like Phosphoesterase DJY80_03700 PF08482 ATP-dependent helicase C-terminal DJY80_03700 PF00270 DEAD/DEAH box helicase DJY80_03700 PF00271 Helicase conserved C-terminal domain DJY80_03700 PF04408 Helicase associated domain (HA2) DJY80_03705 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal DJY80_03705 PF00912 Transglycosylase DJY80_03705 PF14814 Bifunctional transglycosylase second domain DJY80_03705 PF00905 Penicillin binding protein transpeptidase domain DJY80_03710 PF00005 ABC transporter DJY80_03715 PF01497 Periplasmic binding protein DJY80_03720 PF01032 FecCD transport family DJY80_03725 PF00202 Aminotransferase class-III DJY80_03730 PF00654 Voltage gated chloride channel DJY80_03735 PF01521 Iron-sulphur cluster biosynthesis DJY80_03740 PF03458 UPF0126 domain DJY80_03745 PF01497 Periplasmic binding protein DJY80_03750 PF01048 Phosphorylase superfamily DJY80_03755 PF13286 Phosphohydrolase-associated domain DJY80_03755 PF01966 HD domain DJY80_03760 PF00595 PDZ domain DJY80_03765 PF00672 HAMP domain DJY80_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_03765 PF00512 His Kinase A (phospho-acceptor) domain DJY80_03765 PF01627 Hpt domain DJY80_03765 PF00072 Response regulator receiver domain DJY80_03765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJY80_03775 PF05958 tRNA (Uracil-5-)-methyltransferase DJY80_03775 PF01938 TRAM domain DJY80_03780 PF13291 ACT domain DJY80_03780 PF04607 Region found in RelA / SpoT proteins DJY80_03780 PF02824 TGS domain DJY80_03785 PF03819 MazG nucleotide pyrophosphohydrolase domain DJY80_03790 PF06418 CTP synthase N-terminus DJY80_03790 PF00117 Glutamine amidotransferase class-I DJY80_03795 PF00113 Enolase, C-terminal TIM barrel domain DJY80_03795 PF03952 Enolase, N-terminal domain DJY80_03800 PF00080 Copper/zinc superoxide dismutase (SODC) DJY80_03805 PF04055 Radical SAM superfamily DJY80_03810 PF01242 6-pyruvoyl tetrahydropterin synthase DJY80_03815 PF00175 Oxidoreductase NAD-binding domain DJY80_03815 PF00258 Flavodoxin DJY80_03815 PF00667 FAD binding domain DJY80_03820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJY80_03820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJY80_03850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJY80_03850 PF10414 Sirohaem synthase dimerisation region DJY80_03850 PF14824 Sirohaem biosynthesis protein central DJY80_03855 PF01507 Phosphoadenosine phosphosulfate reductase family DJY80_03860 PF00009 Elongation factor Tu GTP binding domain DJY80_03870 PF12084 Protein of unknown function (DUF3561) DJY80_03875 PF04977 Septum formation initiator DJY80_03880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DJY80_03885 PF02542 YgbB family DJY80_03890 PF01142 tRNA pseudouridine synthase D (TruD) DJY80_03895 PF01975 Survival protein SurE DJY80_03905 PF01551 Peptidase family M23 DJY80_03905 PF01476 LysM domain DJY80_03910 PF00140 Sigma-70 factor, region 1.2 DJY80_03910 PF04542 Sigma-70 region 2 DJY80_03910 PF04539 Sigma-70 region 3 DJY80_03910 PF04545 Sigma-70, region 4 DJY80_03915 PF05190 MutS family domain IV DJY80_03915 PF01624 MutS domain I DJY80_03915 PF05192 MutS domain III DJY80_03915 PF00488 MutS domain V DJY80_03915 PF05188 MutS domain II DJY80_03920 PF02502 Ribose/Galactose Isomerase DJY80_03925 PF00107 Zinc-binding dehydrogenase DJY80_03925 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_03935 PF02733 Dak1 domain DJY80_03940 PF02734 DAK2 domain DJY80_03945 PF04198 Putative sugar-binding domain DJY80_03945 PF13936 Helix-turn-helix domain DJY80_03950 PF02040 Arsenical pump membrane protein DJY80_03955 PF01022 Bacterial regulatory protein, arsR family DJY80_03970 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_03975 PF14376 Haem-binding domain DJY80_03975 PF03150 Di-haem cytochrome c peroxidase DJY80_03975 PF00034 Cytochrome c DJY80_03985 PF00593 TonB dependent receptor DJY80_03985 PF07715 TonB-dependent Receptor Plug Domain DJY80_03995 PF00557 Metallopeptidase family M24 DJY80_04005 PF05681 Fumarate hydratase (Fumerase) DJY80_04005 PF05683 Fumarase C-terminus DJY80_04010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_04010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_04015 PF01261 Xylose isomerase-like TIM barrel DJY80_04020 PF02653 Branched-chain amino acid transport system / permease component DJY80_04025 PF02653 Branched-chain amino acid transport system / permease component DJY80_04030 PF00005 ABC transporter DJY80_04035 PF01797 Transposase IS200 like DJY80_04040 PF00800 Prephenate dehydratase DJY80_04040 PF01817 Chorismate mutase type II DJY80_04045 PF02153 Prephenate dehydrogenase DJY80_04045 PF01817 Chorismate mutase type II DJY80_04050 PF00793 DAHP synthetase I family DJY80_04055 PF04397 LytTr DNA-binding domain DJY80_04055 PF00072 Response regulator receiver domain DJY80_04065 PF04338 Protein of unknown function, DUF481 DJY80_04075 PF00665 Integrase core domain DJY80_04075 PF02796 Helix-turn-helix domain of resolvase DJY80_04080 PF01695 IstB-like ATP binding protein DJY80_04090 PF01245 Ribosomal protein L19 DJY80_04095 PF01746 tRNA (Guanine-1)-methyltransferase DJY80_04100 PF01782 RimM N-terminal domain DJY80_04100 PF05239 PRC-barrel domain DJY80_04105 PF00886 Ribosomal protein S16 DJY80_04110 PF00448 SRP54-type protein, GTPase domain DJY80_04110 PF02881 SRP54-type protein, helical bundle domain DJY80_04110 PF02978 Signal peptide binding domain DJY80_04115 PF01578 Cytochrome C assembly protein DJY80_04120 PF00571 CBS domain DJY80_04120 PF03471 Transporter associated domain DJY80_04120 PF01595 Cyclin M transmembrane N-terminal domain DJY80_04125 PF01797 Transposase IS200 like DJY80_04130 PF02664 S-Ribosylhomocysteinase (LuxS) DJY80_04135 PF04262 Glutamate-cysteine ligase DJY80_04140 PF09335 SNARE associated Golgi protein DJY80_04145 PF13419 Haloacid dehalogenase-like hydrolase DJY80_04175 PF02599 Global regulator protein family DJY80_04180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJY80_04180 PF01411 tRNA synthetases class II (A) DJY80_04180 PF02272 DHHA1 domain DJY80_04185 PF02631 RecX family DJY80_04190 PF00154 recA bacterial DNA recombination protein DJY80_04195 PF02464 Competence-damaged protein DJY80_04200 PF07690 Major Facilitator Superfamily DJY80_04220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_04220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_04225 PF02780 Transketolase, C-terminal domain DJY80_04225 PF02779 Transketolase, pyrimidine binding domain DJY80_04230 PF00456 Transketolase, thiamine diphosphate binding domain DJY80_04235 PF02653 Branched-chain amino acid transport system / permease component DJY80_04240 PF00005 ABC transporter DJY80_04255 PF00141 Peroxidase DJY80_04260 PF07361 Cytochrome b562 DJY80_04265 PF01292 Prokaryotic cytochrome b561 DJY80_04270 PF02613 Nitrate reductase delta subunit DJY80_04275 PF04976 DMSO reductase anchor subunit (DmsC) DJY80_04280 PF13247 4Fe-4S dicluster domain DJY80_04280 PF12800 4Fe-4S binding domain DJY80_04285 PF00384 Molybdopterin oxidoreductase DJY80_04285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJY80_04285 PF01568 Molydopterin dinucleotide binding domain DJY80_04290 PF00596 Class II Aldolase and Adducin N-terminal domain DJY80_04295 PF08220 DeoR-like helix-turn-helix domain DJY80_04295 PF00455 DeoR C terminal sensor domain DJY80_04305 PF01797 Transposase IS200 like DJY80_04310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DJY80_04315 PF13525 Outer membrane lipoprotein DJY80_04325 PF00849 RNA pseudouridylate synthase DJY80_04325 PF01479 S4 domain DJY80_04335 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_04335 PF07724 AAA domain (Cdc48 subfamily) DJY80_04335 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_04335 PF17871 AAA lid domain DJY80_04335 PF02861 Clp amino terminal domain, pathogenicity island component DJY80_04375 PF10043 Predicted periplasmic lipoprotein (DUF2279) DJY80_04380 PF13091 PLD-like domain DJY80_04385 PF13380 CoA binding domain DJY80_04385 PF13607 Succinyl-CoA ligase like flavodoxin domain DJY80_04385 PF00583 Acetyltransferase (GNAT) family DJY80_04395 PF00085 Thioredoxin DJY80_04400 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJY80_04400 PF00588 SpoU rRNA Methylase family DJY80_04405 PF07690 Major Facilitator Superfamily DJY80_04410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_04410 PF00529 HlyD membrane-fusion protein of T1SS DJY80_04415 PF01047 MarR family DJY80_04420 PF05437 Branched-chain amino acid transport protein (AzlD) DJY80_04425 PF03591 AzlC protein DJY80_04430 PF07690 Major Facilitator Superfamily DJY80_04440 PF01425 Amidase DJY80_04460 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_04465 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_04475 PF00005 ABC transporter DJY80_04480 PF00266 Aminotransferase class-V DJY80_04485 PF01695 IstB-like ATP binding protein DJY80_04490 PF00665 Integrase core domain DJY80_04490 PF02796 Helix-turn-helix domain of resolvase DJY80_04495 PF00266 Aminotransferase class-V DJY80_04500 PF01546 Peptidase family M20/M25/M40 DJY80_04500 PF07687 Peptidase dimerisation domain DJY80_04510 PF08479 POTRA domain, ShlB-type DJY80_04510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJY80_04520 PF18071 HMW1C N-terminal DJY80_04520 PF18254 HMW1 domain 2 DJY80_04530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJY80_04530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJY80_04530 PF09317 Domain of unknown function (DUF1974) DJY80_04535 PF13580 SIS domain DJY80_04540 PF13230 Glutamine amidotransferases class-II DJY80_04545 PF03734 L,D-transpeptidase catalytic domain DJY80_04555 PF11973 NQRA C-terminal domain DJY80_04555 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DJY80_04560 PF03116 NQR2, RnfD, RnfE family DJY80_04565 PF04205 FMN-binding domain DJY80_04570 PF02508 Rnf-Nqr subunit, membrane protein DJY80_04575 PF02508 Rnf-Nqr subunit, membrane protein DJY80_04580 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_04580 PF00175 Oxidoreductase NAD-binding domain DJY80_04580 PF00970 Oxidoreductase FAD-binding domain DJY80_04585 PF02424 ApbE family DJY80_04595 PF03009 Glycerophosphoryl diester phosphodiesterase family DJY80_04600 PF00817 impB/mucB/samB family DJY80_04600 PF11799 impB/mucB/samB family C-terminal domain DJY80_04600 PF11798 IMS family HHH motif DJY80_04605 PF01546 Peptidase family M20/M25/M40 DJY80_04605 PF07687 Peptidase dimerisation domain DJY80_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_04610 PF03466 LysR substrate binding domain DJY80_04625 PF00156 Phosphoribosyl transferase domain DJY80_04635 PF07417 Sigma factor-binding transcriptional regulator Crl DJY80_04640 PF01472 PUA domain DJY80_04640 PF00696 Amino acid kinase family DJY80_04645 PF01695 IstB-like ATP binding protein DJY80_04650 PF00665 Integrase core domain DJY80_04650 PF02796 Helix-turn-helix domain of resolvase DJY80_04655 PF00171 Aldehyde dehydrogenase family DJY80_04660 PF07238 PilZ domain DJY80_04660 PF07317 Flagellar regulator YcgR DJY80_04670 PF08241 Methyltransferase domain DJY80_04685 PF01202 Shikimate kinase DJY80_04690 PF06865 Pyrimidine/purine nucleoside phosphorylase DJY80_04695 PF04381 Putative exonuclease, RdgC DJY80_04700 PF00480 ROK family DJY80_04705 PF13476 AAA domain DJY80_04710 PF00149 Calcineurin-like phosphoesterase DJY80_04710 PF12320 Type 5 capsule protein repressor C-terminal domain DJY80_04715 PF00486 Transcriptional regulatory protein, C terminal DJY80_04715 PF00072 Response regulator receiver domain DJY80_04720 PF11808 Phosphate regulon sensor protein PhoR DJY80_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_04720 PF00989 PAS fold DJY80_04720 PF00512 His Kinase A (phospho-acceptor) domain DJY80_04725 PF12849 PBP superfamily domain DJY80_04730 PF05525 Branched-chain amino acid transport protein DJY80_04735 PF00324 Amino acid permease DJY80_04740 PF00128 Alpha amylase, catalytic domain DJY80_04740 PF02903 Alpha amylase, N-terminal ig-like domain DJY80_04765 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJY80_04765 PF00578 AhpC/TSA family DJY80_04770 PF04336 Acyl carrier protein phosphodiesterase DJY80_04775 PF02547 Queuosine biosynthesis protein DJY80_04780 PF01702 Queuine tRNA-ribosyltransferase DJY80_04785 PF02699 Preprotein translocase subunit DJY80_04790 PF02355 Protein export membrane protein DJY80_04790 PF13721 SecD export protein N-terminal TM region DJY80_04790 PF07549 SecD/SecF GG Motif DJY80_04795 PF07549 SecD/SecF GG Motif DJY80_04795 PF02355 Protein export membrane protein DJY80_04800 PF01797 Transposase IS200 like DJY80_04820 PF03477 ATP cone domain DJY80_04825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJY80_04825 PF01872 RibD C-terminal domain DJY80_04830 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJY80_04835 PF01029 NusB family DJY80_04840 PF00586 AIR synthase related protein, N-terminal domain DJY80_04840 PF02769 AIR synthase related protein, C-terminal domain DJY80_04845 PF04608 Phosphatidylglycerophosphatase A DJY80_04850 PF01797 Transposase IS200 like DJY80_04855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DJY80_04855 PF02780 Transketolase, C-terminal domain DJY80_04855 PF02779 Transketolase, pyrimidine binding domain DJY80_04860 PF00348 Polyprenyl synthetase DJY80_04865 PF02609 Exonuclease VII small subunit DJY80_04870 PF02568 Thiamine biosynthesis protein (ThiI) DJY80_04870 PF02926 THUMP domain DJY80_04875 PF01965 DJ-1/PfpI family DJY80_04880 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJY80_04880 PF02558 Ketopantoate reductase PanE/ApbA DJY80_04890 PF04461 Protein of unknown function (DUF520) DJY80_04895 PF07690 Major Facilitator Superfamily DJY80_04900 PF01040 UbiA prenyltransferase family DJY80_04905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DJY80_04910 PF00510 Cytochrome c oxidase subunit III DJY80_04915 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJY80_04920 PF06481 COX Aromatic Rich Motif DJY80_04920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJY80_04925 PF03502 Nucleoside-specific channel-forming protein, Tsx DJY80_04930 PF07690 Major Facilitator Superfamily DJY80_04935 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DJY80_04935 PF03923 Uncharacterized lipoprotein DJY80_04940 PF01722 BolA-like protein DJY80_04950 PF05698 Bacterial trigger factor protein (TF) C-terminus DJY80_04950 PF05697 Bacterial trigger factor protein (TF) DJY80_04950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJY80_04955 PF00574 Clp protease DJY80_04960 PF06689 ClpX C4-type zinc finger DJY80_04960 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_04960 PF07724 AAA domain (Cdc48 subfamily) DJY80_04965 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_04965 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJY80_04965 PF05362 Lon protease (S16) C-terminal proteolytic domain DJY80_04970 PF00216 Bacterial DNA-binding protein DJY80_04975 PF01797 Transposase IS200 like DJY80_04980 PF13145 PPIC-type PPIASE domain DJY80_04995 PF06508 Queuosine biosynthesis protein QueC DJY80_05000 PF12793 Sugar transport-related sRNA regulator N-term DJY80_05000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_05010 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_05015 PF01037 Lrp/AsnC ligand binding domain DJY80_05015 PF13404 AsnC-type helix-turn-helix domain DJY80_05020 PF00005 ABC transporter DJY80_05020 PF00664 ABC transporter transmembrane region DJY80_05025 PF00664 ABC transporter transmembrane region DJY80_05025 PF00005 ABC transporter DJY80_05030 PF00543 Nitrogen regulatory protein P-II DJY80_05035 PF00909 Ammonium Transporter Family DJY80_05045 PF09619 Type III secretion system lipoprotein chaperone (YscW) DJY80_05050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJY80_05060 PF05321 Haemolysin expression modulating protein DJY80_05065 PF10757 Biofilm formation regulator YbaJ DJY80_05075 PF00444 Ribosomal protein L36 DJY80_05080 PF01197 Ribosomal protein L31 DJY80_05085 PF00873 AcrB/AcrD/AcrF family DJY80_05090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_05090 PF00529 HlyD membrane-fusion protein of T1SS DJY80_05095 PF00440 Bacterial regulatory proteins, tetR family DJY80_05095 PF08361 MAATS-type transcriptional repressor, C-terminal region DJY80_05100 PF02635 DsrE/DsrF-like family DJY80_05105 PF12794 Mechanosensitive ion channel inner membrane domain 1 DJY80_05105 PF12795 Mechanosensitive ion channel porin domain DJY80_05105 PF00924 Mechanosensitive ion channel DJY80_05110 PF10689 Protein of unknown function (DUF2496) DJY80_05120 PF04304 Protein of unknown function (DUF454) DJY80_05125 PF00156 Phosphoribosyl transferase domain DJY80_05130 PF12169 DNA polymerase III subunits gamma and tau domain III DJY80_05130 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DJY80_05130 PF12170 DNA polymerase III tau subunit V interacting with alpha DJY80_05135 PF02575 YbaB/EbfC DNA-binding family DJY80_05140 PF02132 RecR protein DJY80_05140 PF13662 Toprim domain DJY80_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_05145 PF00183 Hsp90 protein DJY80_05150 PF05191 Adenylate kinase, active site lid DJY80_05155 PF00762 Ferrochelatase DJY80_05160 PF00175 Oxidoreductase NAD-binding domain DJY80_05160 PF00970 Oxidoreductase FAD-binding domain DJY80_05160 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_05165 PF00483 Nucleotidyl transferase DJY80_05170 PF16363 GDP-mannose 4,6 dehydratase DJY80_05175 PF16363 GDP-mannose 4,6 dehydratase DJY80_05180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJY80_05185 PF01370 NAD dependent epimerase/dehydratase family DJY80_05220 PF13439 Glycosyltransferase Family 4 DJY80_05220 PF00534 Glycosyl transferases group 1 DJY80_05230 PF01370 NAD dependent epimerase/dehydratase family DJY80_05235 PF00483 Nucleotidyl transferase DJY80_05235 PF01050 Mannose-6-phosphate isomerase DJY80_05240 PF00535 Glycosyl transferase family 2 DJY80_05245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJY80_05245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJY80_05245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJY80_05245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJY80_05250 PF02706 Chain length determinant protein DJY80_05255 PF00294 pfkB family carbohydrate kinase DJY80_05260 PF02254 TrkA-N domain DJY80_05260 PF00999 Sodium/hydrogen exchanger family DJY80_05265 PF07690 Major Facilitator Superfamily DJY80_05280 PF04073 Aminoacyl-tRNA editing domain DJY80_05285 PF01963 TraB family DJY80_05290 PF00403 Heavy-metal-associated domain DJY80_05295 PF13411 MerR HTH family regulatory protein DJY80_05300 PF01957 NfeD-like C-terminal, partner-binding DJY80_05305 PF01145 SPFH domain / Band 7 family DJY80_05305 PF16200 C-terminal region of band_7 DJY80_05310 PF00085 Thioredoxin DJY80_05315 PF00106 short chain dehydrogenase DJY80_05320 PF13472 GDSL-like Lipase/Acylhydrolase family DJY80_05325 PF00005 ABC transporter DJY80_05335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DJY80_05335 PF02222 ATP-grasp domain DJY80_05340 PF00731 AIR carboxylase DJY80_05350 PF00149 Calcineurin-like phosphoesterase DJY80_05355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJY80_05360 PF09190 DALR domain DJY80_05360 PF01406 tRNA synthetases class I (C) catalytic domain DJY80_05365 PF01797 Transposase IS200 like DJY80_05375 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DJY80_05375 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DJY80_05405 PF00589 Phage integrase family DJY80_05420 PF01066 CDP-alcohol phosphatidyltransferase DJY80_05430 PF01553 Acyltransferase DJY80_05435 PF12147 Putative methyltransferase DJY80_05435 PF12146 Serine aminopeptidase, S33 DJY80_05440 PF00782 Dual specificity phosphatase, catalytic domain DJY80_05455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJY80_05455 PF01367 5'-3' exonuclease, C-terminal SAM fold DJY80_05460 PF01695 IstB-like ATP binding protein DJY80_05465 PF00665 Integrase core domain DJY80_05465 PF02796 Helix-turn-helix domain of resolvase DJY80_05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_05470 PF03466 LysR substrate binding domain DJY80_05475 PF00248 Aldo/keto reductase family DJY80_05480 PF00248 Aldo/keto reductase family DJY80_05505 PF00872 Transposase, Mutator family DJY80_05525 PF16168 Adhesin of bacterial autotransporter system, probable stalk DJY80_05525 PF03797 Autotransporter beta-domain DJY80_05525 PF13018 Extended Signal Peptide of Type V secretion system DJY80_05525 PF03212 Pertactin DJY80_05540 PF05638 Type VI secretion system effector, Hcp DJY80_05560 PF13693 Winged helix-turn-helix DNA-binding DJY80_05565 PF06832 Penicillin-Binding Protein C-terminus Family DJY80_05565 PF00905 Penicillin binding protein transpeptidase domain DJY80_05565 PF00912 Transglycosylase DJY80_05570 PF01797 Transposase IS200 like DJY80_05575 PF01835 MG2 domain DJY80_05575 PF07703 Alpha-2-macroglobulin bait region domain DJY80_05575 PF17962 Bacterial macroglobulin domain 6 DJY80_05575 PF00207 Alpha-2-macroglobulin family DJY80_05575 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DJY80_05575 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DJY80_05575 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DJY80_05590 PF00171 Aldehyde dehydrogenase family DJY80_05595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_05595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_05595 PF00205 Thiamine pyrophosphate enzyme, central domain DJY80_05605 PF13407 Periplasmic binding protein domain DJY80_05610 PF00005 ABC transporter DJY80_05615 PF02653 Branched-chain amino acid transport system / permease component DJY80_05620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJY80_05620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJY80_05625 PF00294 pfkB family carbohydrate kinase DJY80_05630 PF01261 Xylose isomerase-like TIM barrel DJY80_05635 PF04962 KduI/IolB family DJY80_05645 PF00664 ABC transporter transmembrane region DJY80_05645 PF00005 ABC transporter DJY80_05670 PF00196 Bacterial regulatory proteins, luxR family DJY80_05675 PF00313 'Cold-shock' DNA-binding domain DJY80_05680 PF00313 'Cold-shock' DNA-binding domain DJY80_05685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJY80_05690 PF02416 mttA/Hcf106 family DJY80_05700 PF04055 Radical SAM superfamily DJY80_05700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DJY80_05705 PF03099 Biotin/lipoate A/B protein ligase family DJY80_05710 PF04359 Protein of unknown function (DUF493) DJY80_05715 PF00768 D-alanyl-D-alanine carboxypeptidase DJY80_05715 PF07943 Penicillin-binding protein 5, C-terminal domain DJY80_05720 PF05036 Sporulation related domain DJY80_05720 PF03330 Lytic transglycolase DJY80_05725 PF01098 Cell cycle protein DJY80_05730 PF03717 Penicillin-binding Protein dimerisation domain DJY80_05730 PF00905 Penicillin binding protein transpeptidase domain DJY80_05735 PF02590 Predicted SPOUT methyltransferase DJY80_05745 PF01467 Cytidylyltransferase-like DJY80_05750 PF06144 DNA polymerase III, delta subunit DJY80_05750 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DJY80_05755 PF04390 Lipopolysaccharide-assembly DJY80_05760 PF13603 Leucyl-tRNA synthetase, Domain 2 DJY80_05760 PF00133 tRNA synthetases class I (I, L, M and V) DJY80_05760 PF08264 Anticodon-binding domain of tRNA DJY80_05765 PF07295 Zinc-ribbon containing domain DJY80_05770 PF00005 ABC transporter DJY80_05775 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_05780 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_05785 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_05790 PF00795 Carbon-nitrogen hydrolase DJY80_05795 PF00571 CBS domain DJY80_05795 PF03471 Transporter associated domain DJY80_05800 PF02130 Uncharacterized protein family UPF0054 DJY80_05805 PF02562 PhoH-like protein DJY80_05810 PF01938 TRAM domain DJY80_05810 PF04055 Radical SAM superfamily DJY80_05810 PF00919 Uncharacterized protein family UPF0004 DJY80_05815 PF01494 FAD binding domain DJY80_05855 PF13537 Glutamine amidotransferase domain DJY80_05855 PF00733 Asparagine synthase DJY80_05860 PF13344 Haloacid dehalogenase-like hydrolase DJY80_05865 PF01047 MarR family DJY80_05865 PF00480 ROK family DJY80_05870 PF01979 Amidohydrolase family DJY80_05875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DJY80_05880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJY80_05880 PF00367 phosphotransferase system, EIIB DJY80_05880 PF02378 Phosphotransferase system, EIIC DJY80_05885 PF01797 Transposase IS200 like DJY80_05895 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJY80_05895 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DJY80_05900 PF03573 outer membrane porin, OprD family DJY80_05910 PF01475 Ferric uptake regulator family DJY80_05915 PF00258 Flavodoxin DJY80_05925 PF01402 Ribbon-helix-helix protein, copG family DJY80_05930 PF12697 Alpha/beta hydrolase family DJY80_05940 PF00589 Phage integrase family DJY80_05940 PF13356 Arm DNA-binding domain DJY80_05955 PF01695 IstB-like ATP binding protein DJY80_05960 PF00665 Integrase core domain DJY80_05960 PF02796 Helix-turn-helix domain of resolvase DJY80_05970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJY80_05975 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_05980 PF00571 CBS domain DJY80_05980 PF00005 ABC transporter DJY80_05985 PF00268 Ribonucleotide reductase, small chain DJY80_05990 PF08343 Ribonucleotide reductase N-terminal DJY80_05990 PF00317 Ribonucleotide reductase, all-alpha domain DJY80_05990 PF02867 Ribonucleotide reductase, barrel domain DJY80_05995 PF07972 NrdI Flavodoxin like DJY80_06005 PF06392 Acid shock protein repeat DJY80_06010 PF09400 Protein of unknown function (DUF2002) DJY80_06015 PF06711 Protein of unknown function (DUF1198) DJY80_06025 PF00313 'Cold-shock' DNA-binding domain DJY80_06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_06035 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06040 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06040 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_06045 PF00005 ABC transporter DJY80_06050 PF00005 ABC transporter DJY80_06055 PF00547 Urease, gamma subunit DJY80_06060 PF00699 Urease beta subunit DJY80_06065 PF00449 Urease alpha-subunit, N-terminal domain DJY80_06065 PF01979 Amidohydrolase family DJY80_06070 PF05194 UreE urease accessory protein, C-terminal domain DJY80_06070 PF02814 UreE urease accessory protein, N-terminal domain DJY80_06075 PF01730 UreF DJY80_06080 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJY80_06090 PF03253 Urea transporter DJY80_06095 PF03824 High-affinity nickel-transport protein DJY80_06100 PF06411 HdeA/HdeB family DJY80_06105 PF02254 TrkA-N domain DJY80_06105 PF07885 Ion channel DJY80_06110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJY80_06115 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJY80_06125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJY80_06130 PF02378 Phosphotransferase system, EIIC DJY80_06135 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJY80_06140 PF07883 Cupin domain DJY80_06140 PF12833 Helix-turn-helix domain DJY80_06145 PF04794 YdjC-like protein DJY80_06165 PF03925 SeqA protein C-terminal domain DJY80_06165 PF17206 SeqA protein N-terminal domain DJY80_06170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJY80_06170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJY80_06170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJY80_06170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJY80_06185 PF00486 Transcriptional regulatory protein, C terminal DJY80_06185 PF00072 Response regulator receiver domain DJY80_06190 PF13492 GAF domain DJY80_06190 PF00512 His Kinase A (phospho-acceptor) domain DJY80_06190 PF13493 Domain of unknown function (DUF4118) DJY80_06190 PF02702 Osmosensitive K+ channel His kinase sensor domain DJY80_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_06195 PF02669 K+-transporting ATPase, c chain DJY80_06205 PF03814 Potassium-transporting ATPase A subunit DJY80_06220 PF10725 Protein of unknown function (DUF2517) DJY80_06230 PF08349 Protein of unknown function (DUF1722) DJY80_06235 PF00875 DNA photolyase DJY80_06235 PF03441 FAD binding domain of DNA photolyase DJY80_06240 PF02112 cAMP phosphodiesterases class-II DJY80_06245 PF01784 NIF3 (NGG1p interacting factor 3) DJY80_06255 PF02626 Carboxyltransferase domain, subdomain A and B DJY80_06260 PF03746 LamB/YcsF family DJY80_06275 PF01470 Pyroglutamyl peptidase DJY80_06280 PF03167 Uracil DNA glycosylase superfamily DJY80_06290 PF01228 Glycine radical DJY80_06300 PF12796 Ankyrin repeats (3 copies) DJY80_06305 PF00271 Helicase conserved C-terminal domain DJY80_06305 PF00270 DEAD/DEAH box helicase DJY80_06310 PF05175 Methyltransferase small domain DJY80_06315 PF02910 Fumarate reductase flavoprotein C-term DJY80_06315 PF00890 FAD binding domain DJY80_06320 PF04542 Sigma-70 region 2 DJY80_06320 PF08281 Sigma-70, region 4 DJY80_06325 PF03872 Anti sigma-E protein RseA, N-terminal domain DJY80_06325 PF03873 Anti sigma-E protein RseA, C-terminal domain DJY80_06330 PF17188 MucB/RseB C-terminal domain DJY80_06330 PF03888 MucB/RseB N-terminal domain DJY80_06345 PF00679 Elongation factor G C-terminus DJY80_06345 PF00009 Elongation factor Tu GTP binding domain DJY80_06345 PF03144 Elongation factor Tu domain 2 DJY80_06345 PF06421 GTP-binding protein LepA C-terminus DJY80_06350 PF10502 Signal peptidase, peptidase S26 DJY80_06355 PF00035 Double-stranded RNA binding motif DJY80_06355 PF14622 Ribonuclease-III-like DJY80_06360 PF01926 50S ribosome-binding GTPase DJY80_06360 PF07650 KH domain DJY80_06365 PF02565 Recombination protein O C terminal DJY80_06365 PF11967 Recombination protein O N terminal DJY80_06370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DJY80_06375 PF01648 4'-phosphopantetheinyl transferase superfamily DJY80_06380 PF01797 Transposase IS200 like DJY80_06385 PF12838 4Fe-4S dicluster domain DJY80_06390 PF01380 SIS domain DJY80_06390 PF01418 Helix-turn-helix domain, rpiR family DJY80_06395 PF01380 SIS domain DJY80_06405 PF14437 MafB19-like deaminase DJY80_06410 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_06410 PF01464 Transglycosylase SLT domain DJY80_06415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DJY80_06415 PF02769 AIR synthase related protein, C-terminal domain DJY80_06415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DJY80_06440 PF01797 Transposase IS200 like DJY80_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_06450 PF00512 His Kinase A (phospho-acceptor) domain DJY80_06455 PF13942 YfhG lipoprotein DJY80_06460 PF00072 Response regulator receiver domain DJY80_06460 PF00158 Sigma-54 interaction domain DJY80_06465 PF02540 NAD synthase DJY80_06465 PF00795 Carbon-nitrogen hydrolase DJY80_06470 PF00543 Nitrogen regulatory protein P-II DJY80_06480 PF02796 Helix-turn-helix domain of resolvase DJY80_06480 PF00665 Integrase core domain DJY80_06485 PF01695 IstB-like ATP binding protein DJY80_06500 PF00970 Oxidoreductase FAD-binding domain DJY80_06500 PF00175 Oxidoreductase NAD-binding domain DJY80_06500 PF00042 Globin DJY80_06505 PF00464 Serine hydroxymethyltransferase DJY80_06515 PF13505 Outer membrane protein beta-barrel domain DJY80_06520 PF12832 MFS_1 like family DJY80_06525 PF00874 PRD domain DJY80_06530 PF06226 Protein of unknown function (DUF1007) DJY80_06535 PF03824 High-affinity nickel-transport protein DJY80_06540 PF00459 Inositol monophosphatase family DJY80_06545 PF00588 SpoU rRNA Methylase family DJY80_06555 PF00266 Aminotransferase class-V DJY80_06560 PF01592 NifU-like N terminal domain DJY80_06565 PF01521 Iron-sulphur cluster biosynthesis DJY80_06575 PF00226 DnaJ domain DJY80_06575 PF07743 HSCB C-terminal oligomerisation domain DJY80_06580 PF00012 Hsp70 protein DJY80_06585 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_06590 PF04384 Iron-sulphur cluster assembly DJY80_06595 PF12404 Peptidase DJY80_06595 PF00883 Cytosol aminopeptidase family, catalytic domain DJY80_06600 PF07179 SseB protein N-terminal domain DJY80_06600 PF14581 SseB protein C-terminal domain DJY80_06615 PF03212 Pertactin DJY80_06615 PF16168 Adhesin of bacterial autotransporter system, probable stalk DJY80_06615 PF03797 Autotransporter beta-domain DJY80_06620 PF16168 Adhesin of bacterial autotransporter system, probable stalk DJY80_06620 PF03212 Pertactin DJY80_06620 PF03797 Autotransporter beta-domain DJY80_06635 PF00334 Nucleoside diphosphate kinase DJY80_06640 PF04055 Radical SAM superfamily DJY80_06650 PF13464 Domain of unknown function (DUF4115) DJY80_06655 PF04551 GcpE protein DJY80_06660 PF03129 Anticodon binding domain DJY80_06660 PF13393 Histidyl-tRNA synthetase DJY80_06665 PF09976 Tetratricopeptide repeat-like domain DJY80_06670 PF13360 PQQ-like domain DJY80_06675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DJY80_06675 PF01926 50S ribosome-binding GTPase DJY80_06685 PF07191 zinc-ribbons DJY80_06690 PF13742 OB-fold nucleic acid binding domain DJY80_06690 PF02601 Exonuclease VII, large subunit DJY80_06695 PF00571 CBS domain DJY80_06695 PF00478 IMP dehydrogenase / GMP reductase domain DJY80_06700 PF00117 Glutamine amidotransferase class-I DJY80_06700 PF00958 GMP synthase C terminal domain DJY80_06700 PF02540 NAD synthase DJY80_06705 PF01797 Transposase IS200 like DJY80_06715 PF05638 Type VI secretion system effector, Hcp DJY80_06730 PF00872 Transposase, Mutator family DJY80_06745 PF08543 Phosphomethylpyrimidine kinase DJY80_06765 PF00781 Diacylglycerol kinase catalytic domain DJY80_06775 PF07411 Domain of unknown function (DUF1508) DJY80_06780 PF00072 Response regulator receiver domain DJY80_06780 PF00486 Transcriptional regulatory protein, C terminal DJY80_06790 PF07690 Major Facilitator Superfamily DJY80_06795 PF00873 AcrB/AcrD/AcrF family DJY80_06800 PF00873 AcrB/AcrD/AcrF family DJY80_06805 PF13533 Biotin-lipoyl like DJY80_06810 PF00005 ABC transporter DJY80_06810 PF08402 TOBE domain DJY80_06815 PF00155 Aminotransferase class I and II DJY80_06815 PF00392 Bacterial regulatory proteins, gntR family DJY80_06820 PF00202 Aminotransferase class-III DJY80_06830 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06835 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06840 PF00012 Hsp70 protein DJY80_06845 PF03448 MgtE intracellular N domain DJY80_06845 PF01769 Divalent cation transporter DJY80_06845 PF00571 CBS domain DJY80_06855 PF02541 Ppx/GppA phosphatase family DJY80_06860 PF13090 Polyphosphate kinase C-terminal domain 2 DJY80_06860 PF13089 Polyphosphate kinase N-terminal domain DJY80_06860 PF17941 Polyphosphate kinase C-terminal domain 1 DJY80_06860 PF02503 Polyphosphate kinase middle domain DJY80_06865 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06870 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_06875 PF00005 ABC transporter DJY80_06885 PF13302 Acetyltransferase (GNAT) domain DJY80_06890 PF00551 Formyl transferase DJY80_06895 PF00586 AIR synthase related protein, N-terminal domain DJY80_06895 PF02769 AIR synthase related protein, C-terminal domain DJY80_06905 PF01797 Transposase IS200 like DJY80_06910 PF00308 Bacterial dnaA protein DJY80_06915 PF03960 ArsC family DJY80_06920 PF01435 Peptidase family M48 DJY80_06920 PF07720 Tetratricopeptide repeat DJY80_06925 PF01594 AI-2E family transporter DJY80_06940 PF00578 AhpC/TSA family DJY80_06945 PF01842 ACT domain DJY80_06950 PF00701 Dihydrodipicolinate synthetase family DJY80_06955 PF06804 NlpB/DapX lipoprotein DJY80_06960 PF01797 Transposase IS200 like DJY80_06965 PF01259 SAICAR synthetase DJY80_06975 PF04228 Putative neutral zinc metallopeptidase DJY80_06980 PF04284 Protein of unknown function (DUF441) DJY80_06985 PF17176 tRNA-binding domain DJY80_06985 PF05127 Helicase DJY80_06985 PF13718 GNAT acetyltransferase 2 DJY80_06985 PF08351 Domain of unknown function (DUF1726) DJY80_06995 PF13980 Uncharacterised protein family (UPF0370) DJY80_07000 PF02557 D-alanyl-D-alanine carboxypeptidase DJY80_07005 PF01546 Peptidase family M20/M25/M40 DJY80_07005 PF07687 Peptidase dimerisation domain DJY80_07010 PF03960 ArsC family DJY80_07025 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07030 PF00005 ABC transporter DJY80_07030 PF08402 TOBE domain DJY80_07040 PF00884 Sulfatase DJY80_07045 PF13186 Iron-sulfur cluster-binding domain DJY80_07045 PF04055 Radical SAM superfamily DJY80_07050 PF04307 LexA-binding, inner membrane-associated putative hydrolase DJY80_07060 PF00873 AcrB/AcrD/AcrF family DJY80_07070 PF00072 Response regulator receiver domain DJY80_07070 PF00196 Bacterial regulatory proteins, luxR family DJY80_07075 PF00037 4Fe-4S binding domain DJY80_07075 PF12800 4Fe-4S binding domain DJY80_07075 PF13187 4Fe-4S dicluster domain DJY80_07080 PF03927 NapD protein DJY80_07090 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DJY80_07095 PF03264 NapC/NirT cytochrome c family, N-terminal region DJY80_07100 PF00293 NUDIX domain DJY80_07110 PF01695 IstB-like ATP binding protein DJY80_07115 PF00665 Integrase core domain DJY80_07115 PF02796 Helix-turn-helix domain of resolvase DJY80_07125 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJY80_07130 PF01218 Coproporphyrinogen III oxidase DJY80_07135 PF00583 Acetyltransferase (GNAT) family DJY80_07150 PF03797 Autotransporter beta-domain DJY80_07150 PF16168 Adhesin of bacterial autotransporter system, probable stalk DJY80_07150 PF13018 Extended Signal Peptide of Type V secretion system DJY80_07150 PF03212 Pertactin DJY80_07155 PF04076 Bacterial OB fold (BOF) protein DJY80_07160 PF06572 Protein of unknown function (DUF1131) DJY80_07165 PF04261 Dyp-type peroxidase family DJY80_07170 PF00701 Dihydrodipicolinate synthetase family DJY80_07175 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DJY80_07180 PF12468 Type III secretion system leucine rich repeat protein DJY80_07185 PF00480 ROK family DJY80_07190 PF04074 YhcH/YjgK/YiaL DJY80_07200 PF01380 SIS domain DJY80_07200 PF01418 Helix-turn-helix domain, rpiR family DJY80_07205 PF07690 Major Facilitator Superfamily DJY80_07215 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07220 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07225 PF00005 ABC transporter DJY80_07230 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_07240 PF00486 Transcriptional regulatory protein, C terminal DJY80_07240 PF00072 Response regulator receiver domain DJY80_07245 PF00512 His Kinase A (phospho-acceptor) domain DJY80_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_07245 PF00672 HAMP domain DJY80_07255 PF00155 Aminotransferase class I and II DJY80_07265 PF00557 Metallopeptidase family M24 DJY80_07265 PF05195 Aminopeptidase P, N-terminal domain DJY80_07275 PF00474 Sodium:solute symporter family DJY80_07280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJY80_07280 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_07285 PF12704 MacB-like periplasmic core domain DJY80_07285 PF00005 ABC transporter DJY80_07285 PF02687 FtsX-like permease family DJY80_07290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_07295 PF00072 Response regulator receiver domain DJY80_07295 PF00486 Transcriptional regulatory protein, C terminal DJY80_07300 PF00672 HAMP domain DJY80_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_07300 PF00512 His Kinase A (phospho-acceptor) domain DJY80_07300 PF16527 Two-component sensor protein CpxA, periplasmic domain DJY80_07305 PF02796 Helix-turn-helix domain of resolvase DJY80_07305 PF00665 Integrase core domain DJY80_07310 PF01695 IstB-like ATP binding protein DJY80_07315 PF01797 Transposase IS200 like DJY80_07320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJY80_07325 PF02896 PEP-utilising enzyme, TIM barrel domain DJY80_07325 PF00391 PEP-utilising enzyme, mobile domain DJY80_07325 PF05524 PEP-utilising enzyme, N-terminal DJY80_07330 PF00381 PTS HPr component phosphorylation site DJY80_07335 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_07345 PF04354 ZipA, C-terminal FtsZ-binding domain DJY80_07350 PF03120 NAD-dependent DNA ligase OB-fold domain DJY80_07350 PF00533 BRCA1 C Terminus (BRCT) domain DJY80_07350 PF01653 NAD-dependent DNA ligase adenylation domain DJY80_07350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DJY80_07350 PF12826 Helix-hairpin-helix motif DJY80_07355 PF12843 Putative quorum-sensing-regulated virulence factor DJY80_07380 PF01797 Transposase IS200 like DJY80_07385 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJY80_07420 PF01773 Na+ dependent nucleoside transporter N-terminus DJY80_07420 PF07662 Na+ dependent nucleoside transporter C-terminus DJY80_07420 PF07670 Nucleoside recognition DJY80_07425 PF01566 Natural resistance-associated macrophage protein DJY80_07435 PF00248 Aldo/keto reductase family DJY80_07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_07440 PF03466 LysR substrate binding domain DJY80_07450 PF02685 Glucokinase DJY80_07455 PF07350 Protein of unknown function (DUF1479) DJY80_07460 PF00155 Aminotransferase class I and II DJY80_07470 PF01292 Prokaryotic cytochrome b561 DJY80_07480 PF03783 Curli production assembly/transport component CsgG DJY80_07490 PF05643 Putative bacterial lipoprotein (DUF799) DJY80_07500 PF02613 Nitrate reductase delta subunit DJY80_07505 PF04976 DMSO reductase anchor subunit (DmsC) DJY80_07510 PF12800 4Fe-4S binding domain DJY80_07510 PF13247 4Fe-4S dicluster domain DJY80_07515 PF01568 Molydopterin dinucleotide binding domain DJY80_07515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJY80_07515 PF00384 Molybdopterin oxidoreductase DJY80_07525 PF05638 Type VI secretion system effector, Hcp DJY80_07535 PF00005 ABC transporter DJY80_07540 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07600 PF07724 AAA domain (Cdc48 subfamily) DJY80_07600 PF17871 AAA lid domain DJY80_07600 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_07600 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_07605 PF16970 Type-1 fimbrial protein, A DJY80_07610 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_07610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_07615 PF00577 Outer membrane usher protein DJY80_07615 PF13953 PapC C-terminal domain DJY80_07615 PF13954 PapC N-terminal domain DJY80_07625 PF00872 Transposase, Mutator family DJY80_07630 PF13953 PapC C-terminal domain DJY80_07630 PF00577 Outer membrane usher protein DJY80_07630 PF13954 PapC N-terminal domain DJY80_07670 PF00665 Integrase core domain DJY80_07670 PF02796 Helix-turn-helix domain of resolvase DJY80_07675 PF01695 IstB-like ATP binding protein DJY80_07690 PF04717 Type VI secretion system, phage-baseplate injector DJY80_07720 PF03831 PhnA domain DJY80_07720 PF08274 PhnA Zinc-Ribbon DJY80_07730 PF04011 LemA family DJY80_07745 PF00005 ABC transporter DJY80_07750 PF03379 CcmB protein DJY80_07755 PF01578 Cytochrome C assembly protein DJY80_07760 PF04995 Heme exporter protein D (CcmD) DJY80_07765 PF03100 CcmE DJY80_07770 PF01578 Cytochrome C assembly protein DJY80_07770 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DJY80_07775 PF08534 Redoxin DJY80_07780 PF03918 Cytochrome C biogenesis protein DJY80_07785 PF03918 Cytochrome C biogenesis protein DJY80_07790 PF04333 MlaA lipoprotein DJY80_07795 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DJY80_07800 PF04175 Protein of unknown function (DUF406) DJY80_07805 PF02803 Thiolase, C-terminal domain DJY80_07805 PF00108 Thiolase, N-terminal domain DJY80_07810 PF00378 Enoyl-CoA hydratase/isomerase DJY80_07810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJY80_07810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJY80_07815 PF00300 Histidine phosphatase superfamily (branch 1) DJY80_07820 PF01713 Smr domain DJY80_07825 PF05175 Methyltransferase small domain DJY80_07830 PF01264 Chorismate synthase DJY80_07835 PF03411 Penicillin-insensitive murein endopeptidase DJY80_07840 PF01925 Sulfite exporter TauE/SafE DJY80_07845 PF04315 Elongation factor P hydroxylase DJY80_07850 PF08891 YfcL protein DJY80_07855 PF01266 FAD dependent oxidoreductase DJY80_07855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DJY80_07860 PF00109 Beta-ketoacyl synthase, N-terminal domain DJY80_07860 PF02801 Beta-ketoacyl synthase, C-terminal domain DJY80_07865 PF01177 Asp/Glu/Hydantoin racemase DJY80_07870 PF00419 Fimbrial protein DJY80_07880 PF00892 EamA-like transporter family DJY80_07890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_07890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_07890 PF11890 Domain of unknown function (DUF3410) DJY80_07895 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJY80_07895 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJY80_07900 PF01416 tRNA pseudouridine synthase DJY80_07905 PF09335 SNARE associated Golgi protein DJY80_07910 PF17848 Acetyl-coA carboxylase zinc finger domain DJY80_07910 PF01039 Carboxyl transferase domain DJY80_07915 PF08245 Mur ligase middle domain DJY80_07915 PF02875 Mur ligase family, glutamate ligase domain DJY80_07920 PF05036 Sporulation related domain DJY80_07925 PF02674 Colicin V production protein DJY80_07930 PF00156 Phosphoribosyl transferase domain DJY80_07935 PF02441 Flavoprotein DJY80_07940 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_07945 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07950 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_07955 PF00005 ABC transporter DJY80_07960 PF08338 Domain of unknown function (DUF1731) DJY80_07960 PF01370 NAD dependent epimerase/dehydratase family DJY80_07975 PF00293 NUDIX domain DJY80_07980 PF03611 PTS system sugar-specific permease component DJY80_07985 PF00872 Transposase, Mutator family DJY80_08000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJY80_08005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_08005 PF00356 Bacterial regulatory proteins, lacI family DJY80_08010 PF07085 DRTGG domain DJY80_08010 PF01515 Phosphate acetyl/butaryl transferase DJY80_08015 PF00871 Acetokinase family DJY80_08020 PF04217 Protein of unknown function, DUF412 DJY80_08025 PF03887 YfbU domain DJY80_08030 PF13419 Haloacid dehalogenase-like hydrolase DJY80_08035 PF02080 TrkA-C domain DJY80_08035 PF03600 Citrate transporter DJY80_08050 PF00155 Aminotransferase class I and II DJY80_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_08055 PF03466 LysR substrate binding domain DJY80_08060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DJY80_08065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DJY80_08070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DJY80_08070 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DJY80_08080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DJY80_08080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DJY80_08080 PF10531 SLBB domain DJY80_08085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJY80_08085 PF01568 Molydopterin dinucleotide binding domain DJY80_08085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJY80_08085 PF00384 Molybdopterin oxidoreductase DJY80_08090 PF00146 NADH dehydrogenase DJY80_08095 PF12838 4Fe-4S dicluster domain DJY80_08100 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DJY80_08105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJY80_08110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJY80_08110 PF00361 Proton-conducting membrane transporter DJY80_08115 PF00361 Proton-conducting membrane transporter DJY80_08120 PF00361 Proton-conducting membrane transporter DJY80_08135 PF00106 short chain dehydrogenase DJY80_08140 PF01202 Shikimate kinase DJY80_08160 PF00356 Bacterial regulatory proteins, lacI family DJY80_08165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_08165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_08170 PF07690 Major Facilitator Superfamily DJY80_08175 PF03928 Haem-degrading DJY80_08180 PF00920 Dehydratase family DJY80_08195 PF05957 Bacterial protein of unknown function (DUF883) DJY80_08205 PF00425 chorismate binding enzyme DJY80_08210 PF16582 Middle domain of thiamine pyrophosphate DJY80_08210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_08210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_08215 PF12697 Alpha/beta hydrolase family DJY80_08220 PF00378 Enoyl-CoA hydratase/isomerase DJY80_08225 PF13378 Enolase C-terminal domain-like DJY80_08230 PF00501 AMP-binding enzyme DJY80_08230 PF13193 AMP-binding enzyme C-terminal domain DJY80_08235 PF02885 Glycosyl transferase family, helical bundle domain DJY80_08245 PF07338 Protein of unknown function (DUF1471) DJY80_08250 PF05971 RNA methyltransferase DJY80_08265 PF01695 IstB-like ATP binding protein DJY80_08270 PF02796 Helix-turn-helix domain of resolvase DJY80_08270 PF00665 Integrase core domain DJY80_08275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_08275 PF13426 PAS domain DJY80_08275 PF08447 PAS fold DJY80_08280 PF00005 ABC transporter DJY80_08285 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_08290 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_08300 PF00210 Ferritin-like domain DJY80_08305 PF13649 Methyltransferase domain DJY80_08315 PF00892 EamA-like transporter family DJY80_08320 PF13505 Outer membrane protein beta-barrel domain DJY80_08340 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_08340 PF00107 Zinc-binding dehydrogenase DJY80_08345 PF13407 Periplasmic binding protein domain DJY80_08350 PF00005 ABC transporter DJY80_08355 PF02653 Branched-chain amino acid transport system / permease component DJY80_08360 PF00356 Bacterial regulatory proteins, lacI family DJY80_08365 PF03466 LysR substrate binding domain DJY80_08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_08370 PF00180 Isocitrate/isopropylmalate dehydrogenase DJY80_08380 PF02028 BCCT, betaine/carnitine/choline family transporter DJY80_08390 PF00175 Oxidoreductase NAD-binding domain DJY80_08390 PF00970 Oxidoreductase FAD-binding domain DJY80_08390 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_08395 PF17287 POTRA domain DJY80_08395 PF08479 POTRA domain, ShlB-type DJY80_08395 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJY80_08420 PF04829 Pre-toxin domain with VENN motif DJY80_08420 PF05860 haemagglutination activity domain DJY80_08420 PF13332 Hemagglutinin repeat DJY80_08420 PF13018 Extended Signal Peptide of Type V secretion system DJY80_08440 PF13332 Hemagglutinin repeat DJY80_08440 PF04829 Pre-toxin domain with VENN motif DJY80_08440 PF05860 haemagglutination activity domain DJY80_08440 PF15526 Novel toxin 21 DJY80_08440 PF05594 Haemagluttinin repeat DJY80_08445 PF13332 Hemagglutinin repeat DJY80_08445 PF04829 Pre-toxin domain with VENN motif DJY80_08445 PF05594 Haemagluttinin repeat DJY80_08445 PF05860 haemagglutination activity domain DJY80_08445 PF15526 Novel toxin 21 DJY80_08455 PF00005 ABC transporter DJY80_08455 PF17912 MalK OB fold domain DJY80_08460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJY80_08460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJY80_08460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJY80_08460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJY80_08465 PF00356 Bacterial regulatory proteins, lacI family DJY80_08475 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_08480 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_08485 PF04041 beta-1,4-mannooligosaccharide phosphorylase DJY80_08505 PF00924 Mechanosensitive ion channel DJY80_08510 PF01867 CRISPR associated protein Cas1 DJY80_08520 PF09611 CRISPR-associated protein (Cas_Csy1) DJY80_08525 PF09614 CRISPR-associated protein (Cas_Csy2) DJY80_08530 PF09615 CRISPR-associated protein (Cas_Csy3) DJY80_08535 PF09618 CRISPR-associated protein (Cas_Csy4) DJY80_08540 PF00248 Aldo/keto reductase family DJY80_08560 PF03466 LysR substrate binding domain DJY80_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_08565 PF00196 Bacterial regulatory proteins, luxR family DJY80_08565 PF03472 Autoinducer binding domain DJY80_08570 PF00765 Autoinducer synthase DJY80_08590 PF01594 AI-2E family transporter DJY80_08600 PF00196 Bacterial regulatory proteins, luxR family DJY80_08605 PF01266 FAD dependent oxidoreductase DJY80_08610 PF00872 Transposase, Mutator family DJY80_08625 PF03992 Antibiotic biosynthesis monooxygenase DJY80_08630 PF01979 Amidohydrolase family DJY80_08635 PF06183 DinI-like family DJY80_08645 PF13991 BssS protein family DJY80_08650 PF00872 Transposase, Mutator family DJY80_08655 PF00575 S1 RNA binding domain DJY80_08655 PF12111 Polyribonucleotide phosphorylase C terminal DJY80_08655 PF10150 Ribonuclease E/G family DJY80_08660 PF01479 S4 domain DJY80_08660 PF00849 RNA pseudouridylate synthase DJY80_08665 PF02545 Maf-like protein DJY80_08670 PF02620 Large ribosomal RNA subunit accumulation protein YceD DJY80_08675 PF01783 Ribosomal L32p protein family DJY80_08680 PF02504 Fatty acid synthesis protein DJY80_08685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJY80_08685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJY80_08690 PF00698 Acyl transferase domain DJY80_08700 PF00550 Phosphopantetheine attachment site DJY80_08705 PF02801 Beta-ketoacyl synthase, C-terminal domain DJY80_08705 PF00109 Beta-ketoacyl synthase, N-terminal domain DJY80_08710 PF01797 Transposase IS200 like DJY80_08715 PF01063 Amino-transferase class IV DJY80_08720 PF02618 YceG-like family DJY80_08725 PF02223 Thymidylate kinase DJY80_08730 PF09115 DNA polymerase III, delta subunit, C terminal DJY80_08735 PF01026 TatD related DNase DJY80_08740 PF00367 phosphotransferase system, EIIB DJY80_08740 PF02378 Phosphotransferase system, EIIC DJY80_08745 PF01797 Transposase IS200 like DJY80_08750 PF08501 Shikimate dehydrogenase substrate binding domain DJY80_08755 PF01230 HIT domain DJY80_08760 PF07233 Protein of unknown function (DUF1425) DJY80_08765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DJY80_08765 PF13036 Peptidoglycan-synthase activator LpoB DJY80_08770 PF01636 Phosphotransferase enzyme family DJY80_08775 PF00933 Glycosyl hydrolase family 3 N terminal domain DJY80_08780 PF05728 Uncharacterised protein family (UPF0227) DJY80_08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_08805 PF00872 Transposase, Mutator family DJY80_08815 PF05433 Glycine zipper 2TM domain DJY80_08820 PF17757 UvrB interaction domain DJY80_08820 PF02559 CarD-like/TRCF domain DJY80_08820 PF00270 DEAD/DEAH box helicase DJY80_08820 PF00271 Helicase conserved C-terminal domain DJY80_08820 PF03461 TRCF domain DJY80_08825 PF12704 MacB-like periplasmic core domain DJY80_08825 PF02687 FtsX-like permease family DJY80_08830 PF00005 ABC transporter DJY80_08835 PF12704 MacB-like periplasmic core domain DJY80_08835 PF02687 FtsX-like permease family DJY80_08840 PF00480 ROK family DJY80_08845 PF00480 ROK family DJY80_08850 PF02146 Sir2 family DJY80_08855 PF01546 Peptidase family M20/M25/M40 DJY80_08855 PF07687 Peptidase dimerisation domain DJY80_08865 PF08007 Cupin superfamily protein DJY80_08870 PF08918 PhoQ Sensor DJY80_08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_08875 PF00486 Transcriptional regulatory protein, C terminal DJY80_08875 PF00072 Response regulator receiver domain DJY80_08885 PF00206 Lyase DJY80_08885 PF08328 Adenylosuccinate lyase C-terminal DJY80_08890 PF04356 Protein of unknown function (DUF489) DJY80_08900 PF00293 NUDIX domain DJY80_08905 PF00849 RNA pseudouridylate synthase DJY80_08910 PF00180 Isocitrate/isopropylmalate dehydrogenase DJY80_08915 PF00356 Bacterial regulatory proteins, lacI family DJY80_08915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_08925 PF08447 PAS fold DJY80_08930 PF05368 NmrA-like family DJY80_08935 PF01638 HxlR-like helix-turn-helix DJY80_08940 PF00328 Histidine phosphatase superfamily (branch 2) DJY80_08945 PF14001 YdfZ protein DJY80_08955 PF01037 Lrp/AsnC ligand binding domain DJY80_08955 PF13404 AsnC-type helix-turn-helix domain DJY80_08965 PF10777 Inner membrane protein YlaC DJY80_08970 PF00107 Zinc-binding dehydrogenase DJY80_08970 PF16197 Ketoacyl-synthetase C-terminal extension DJY80_08970 PF00109 Beta-ketoacyl synthase, N-terminal domain DJY80_08970 PF02801 Beta-ketoacyl synthase, C-terminal domain DJY80_08970 PF08659 KR domain DJY80_08970 PF00550 Phosphopantetheine attachment site DJY80_08970 PF14765 Polyketide synthase dehydratase DJY80_08970 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_08970 PF00698 Acyl transferase domain DJY80_08975 PF01695 IstB-like ATP binding protein DJY80_08980 PF02796 Helix-turn-helix domain of resolvase DJY80_08980 PF00665 Integrase core domain DJY80_08985 PF00703 Glycosyl hydrolases family 2 DJY80_08985 PF02837 Glycosyl hydrolases family 2, sugar binding domain DJY80_08985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DJY80_08985 PF02929 Beta galactosidase small chain DJY80_08985 PF16353 Domain of unknown function(DUF4981) DJY80_08990 PF00313 'Cold-shock' DNA-binding domain DJY80_08995 PF10781 Dextransucrase DSRB DJY80_09005 PF02308 MgtC family DJY80_09010 PF00690 Cation transporter/ATPase, N-terminus DJY80_09010 PF00689 Cation transporting ATPase, C-terminus DJY80_09020 PF05280 Flagellar transcriptional activator (FlhC) DJY80_09025 PF01618 MotA/TolQ/ExbB proton channel family DJY80_09030 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJY80_09030 PF00691 OmpA family DJY80_09035 PF09078 CheY binding DJY80_09035 PF02895 Signal transducing histidine kinase, homodimeric domain DJY80_09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_09035 PF01627 Hpt domain DJY80_09035 PF01584 CheW-like domain DJY80_09040 PF01584 CheW-like domain DJY80_09045 PF07690 Major Facilitator Superfamily DJY80_09050 PF01042 Endoribonuclease L-PSP DJY80_09060 PF13309 HTH domain DJY80_09060 PF08348 YheO-like PAS domain DJY80_09065 PF12951 Passenger-associated-transport-repeat DJY80_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_09080 PF02203 Tar ligand binding domain homologue DJY80_09080 PF00672 HAMP domain DJY80_09085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_09085 PF02203 Tar ligand binding domain homologue DJY80_09085 PF00672 HAMP domain DJY80_09090 PF03705 CheR methyltransferase, all-alpha domain DJY80_09090 PF01739 CheR methyltransferase, SAM binding domain DJY80_09095 PF01339 CheB methylesterase DJY80_09095 PF00072 Response regulator receiver domain DJY80_09100 PF00072 Response regulator receiver domain DJY80_09105 PF04344 Chemotaxis phosphatase, CheZ DJY80_09115 PF01510 N-acetylmuramoyl-L-alanine amidase DJY80_09125 PF13018 Extended Signal Peptide of Type V secretion system DJY80_09125 PF03895 YadA-like membrane anchor domain DJY80_09125 PF05658 Head domain of trimeric autotransporter adhesin DJY80_09125 PF05662 Coiled stalk of trimeric autotransporter adhesin DJY80_09135 PF01168 Alanine racemase, N-terminal domain DJY80_09135 PF00842 Alanine racemase, C-terminal domain DJY80_09160 PF01695 IstB-like ATP binding protein DJY80_09165 PF00665 Integrase core domain DJY80_09165 PF02796 Helix-turn-helix domain of resolvase DJY80_09175 PF07351 Protein of unknown function (DUF1480) DJY80_09190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_09190 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_09210 PF02470 MlaD protein DJY80_09215 PF04403 Paraquat-inducible protein A DJY80_09220 PF13185 GAF domain DJY80_09225 PF04352 ProQ/FINO family DJY80_09225 PF17516 ProQ C-terminal domain DJY80_09230 PF17804 Tail specific protease N-terminal domain DJY80_09230 PF00595 PDZ domain DJY80_09230 PF03572 Peptidase family S41 DJY80_09230 PF11818 C-terminal domain of tail specific protease (DUF3340) DJY80_09235 PF01435 Peptidase family M48 DJY80_09245 PF00419 Fimbrial protein DJY80_09250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_09250 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_09255 PF13953 PapC C-terminal domain DJY80_09255 PF13954 PapC N-terminal domain DJY80_09255 PF00577 Outer membrane usher protein DJY80_09265 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_09265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_09270 PF07690 Major Facilitator Superfamily DJY80_09275 PF14583 Oligogalacturonate lyase DJY80_09280 PF01614 Bacterial transcriptional regulator DJY80_09280 PF09339 IclR helix-turn-helix domain DJY80_09285 PF01510 N-acetylmuramoyl-L-alanine amidase DJY80_09295 PF04307 LexA-binding, inner membrane-associated putative hydrolase DJY80_09300 PF06178 Oligogalacturonate-specific porin protein (KdgM) DJY80_09305 PF01547 Bacterial extracellular solute-binding protein DJY80_09310 PF00005 ABC transporter DJY80_09310 PF03459 TOBE domain DJY80_09310 PF17912 MalK OB fold domain DJY80_09315 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_09320 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_09325 PF06917 Periplasmic pectate lyase DJY80_09335 PF04962 KduI/IolB family DJY80_09340 PF07883 Cupin domain DJY80_09345 PF00872 Transposase, Mutator family DJY80_09350 PF13419 Haloacid dehalogenase-like hydrolase DJY80_09355 PF14002 YniB-like protein DJY80_09370 PF00950 ABC 3 transport family DJY80_09375 PF00950 ABC 3 transport family DJY80_09380 PF00005 ABC transporter DJY80_09385 PF01297 Zinc-uptake complex component A periplasmic DJY80_09390 PF01464 Transglycosylase SLT domain DJY80_09395 PF01914 MarC family integral membrane protein DJY80_09410 PF13619 KTSC domain DJY80_09415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJY80_09415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJY80_09415 PF02824 TGS domain DJY80_09415 PF03129 Anticodon binding domain DJY80_09420 PF00707 Translation initiation factor IF-3, C-terminal domain DJY80_09420 PF05198 Translation initiation factor IF-3, N-terminal domain DJY80_09425 PF01632 Ribosomal protein L35 DJY80_09430 PF00453 Ribosomal protein L20 DJY80_09440 PF01409 tRNA synthetases class II core domain (F) DJY80_09440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJY80_09445 PF01588 Putative tRNA binding domain DJY80_09445 PF03483 B3/4 domain DJY80_09445 PF03484 tRNA synthetase B5 domain DJY80_09445 PF03147 Ferredoxin-fold anticodon binding domain DJY80_09445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DJY80_09450 PF00216 Bacterial DNA-binding protein DJY80_09460 PF01032 FecCD transport family DJY80_09465 PF00255 Glutathione peroxidase DJY80_09470 PF00005 ABC transporter DJY80_09475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJY80_09480 PF00535 Glycosyl transferase family 2 DJY80_09485 PF00551 Formyl transferase DJY80_09485 PF02911 Formyl transferase, C-terminal domain DJY80_09485 PF01370 NAD dependent epimerase/dehydratase family DJY80_09490 PF01522 Polysaccharide deacetylase DJY80_09495 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DJY80_09500 PF00892 EamA-like transporter family DJY80_09515 PF00877 NlpC/P60 family DJY80_09520 PF10437 Bacterial lipoate protein ligase C-terminus DJY80_09520 PF03099 Biotin/lipoate A/B protein ligase family DJY80_09530 PF00793 DAHP synthetase I family DJY80_09535 PF03618 Kinase/pyrophosphorylase DJY80_09540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DJY80_09540 PF02896 PEP-utilising enzyme, TIM barrel domain DJY80_09540 PF00391 PEP-utilising enzyme, mobile domain DJY80_09550 PF01594 AI-2E family transporter DJY80_09555 PF01565 FAD binding domain DJY80_09555 PF13183 4Fe-4S dicluster domain DJY80_09555 PF02913 FAD linked oxidases, C-terminal domain DJY80_09560 PF03061 Thioesterase superfamily DJY80_09570 PF01521 Iron-sulphur cluster biosynthesis DJY80_09575 PF01458 Uncharacterized protein family (UPF0051) DJY80_09580 PF00005 ABC transporter DJY80_09585 PF01458 Uncharacterized protein family (UPF0051) DJY80_09590 PF00266 Aminotransferase class-V DJY80_09595 PF02657 Fe-S metabolism associated domain DJY80_09600 PF17969 L,D-transpeptidase C-terminal domain DJY80_09600 PF01476 LysM domain DJY80_09600 PF03734 L,D-transpeptidase catalytic domain DJY80_09605 PF01695 IstB-like ATP binding protein DJY80_09610 PF00665 Integrase core domain DJY80_09610 PF02796 Helix-turn-helix domain of resolvase DJY80_09615 PF01797 Transposase IS200 like DJY80_09620 PF04728 Lipoprotein leucine-zipper DJY80_09625 PF00224 Pyruvate kinase, barrel domain DJY80_09625 PF02887 Pyruvate kinase, alpha/beta domain DJY80_09640 PF01554 MatE DJY80_09650 PF00677 Lumazine binding domain DJY80_09660 PF07690 Major Facilitator Superfamily DJY80_09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_09665 PF03466 LysR substrate binding domain DJY80_09670 PF00356 Bacterial regulatory proteins, lacI family DJY80_09680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJY80_09680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJY80_09685 PF00877 NlpC/P60 family DJY80_09695 PF00462 Glutaredoxin DJY80_09705 PF00929 Exonuclease DJY80_09710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJY80_09720 PF16925 Tetracyclin repressor-like, C-terminal domain DJY80_09720 PF00440 Bacterial regulatory proteins, tetR family DJY80_09725 PF00884 Sulfatase DJY80_09725 PF08019 Phosphoethanolamine transferase EptA/EptB DJY80_09735 PF01047 MarR family DJY80_09740 PF05433 Glycine zipper 2TM domain DJY80_09745 PF03702 Anhydro-N-acetylmuramic acid kinase DJY80_09750 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DJY80_09755 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DJY80_09755 PF01243 Pyridoxamine 5'-phosphate oxidase DJY80_09760 PF01479 S4 domain DJY80_09760 PF00579 tRNA synthetases class I (W and Y) DJY80_09765 PF08543 Phosphomethylpyrimidine kinase DJY80_09770 PF00043 Glutathione S-transferase, C-terminal domain DJY80_09770 PF02798 Glutathione S-transferase, N-terminal domain DJY80_09775 PF11656 YjbD family (DUF3811) DJY80_09780 PF04893 Yip1 domain DJY80_09785 PF00854 POT family DJY80_09795 PF00005 ABC transporter DJY80_09800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_09800 PF00005 ABC transporter DJY80_09805 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_09805 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_09810 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_09825 PF01797 Transposase IS200 like DJY80_09830 PF02954 Bacterial regulatory protein, Fis family DJY80_09830 PF00158 Sigma-54 interaction domain DJY80_09835 PF04012 PspA/IM30 family DJY80_09840 PF06667 Phage shock protein B DJY80_09845 PF04024 PspC domain DJY80_09855 PF04317 YcjX-like family, DUF463 DJY80_09860 PF05128 Domain of unknown function (DUF697) DJY80_09875 PF00158 Sigma-54 interaction domain DJY80_09875 PF18024 Helix-turn-helix domain DJY80_09885 PF00665 Integrase core domain DJY80_09885 PF02796 Helix-turn-helix domain of resolvase DJY80_09890 PF01695 IstB-like ATP binding protein DJY80_09895 PF01797 Transposase IS200 like DJY80_09900 PF08534 Redoxin DJY80_09905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJY80_09905 PF13378 Enolase C-terminal domain-like DJY80_09910 PF00246 Zinc carboxypeptidase DJY80_09915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_09920 PF01544 CorA-like Mg2+ transporter protein DJY80_09935 PF13472 GDSL-like Lipase/Acylhydrolase family DJY80_09935 PF07859 alpha/beta hydrolase fold DJY80_09940 PF01171 PP-loop family DJY80_09945 PF10371 Domain of unknown function DJY80_09945 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DJY80_09945 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DJY80_09945 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DJY80_09945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_09950 PF00893 Small Multidrug Resistance protein DJY80_09955 PF02308 MgtC family DJY80_09960 PF03891 Domain of unknown function (DUF333) DJY80_09965 PF03724 META domain DJY80_09970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_09970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_09975 PF11739 Dicarboxylate transport DJY80_09980 PF13617 YnbE-like lipoprotein DJY80_09985 PF07027 Protein of unknown function (DUF1318) DJY80_09990 PF01232 Mannitol dehydrogenase Rossmann domain DJY80_09990 PF08125 Mannitol dehydrogenase C-terminal domain DJY80_09995 PF00325 Bacterial regulatory proteins, crp family DJY80_09995 PF04198 Putative sugar-binding domain DJY80_10000 PF02525 Flavodoxin-like fold DJY80_10005 PF04408 Helicase associated domain (HA2) DJY80_10005 PF00270 DEAD/DEAH box helicase DJY80_10005 PF11898 Domain of unknown function (DUF3418) DJY80_10005 PF00271 Helicase conserved C-terminal domain DJY80_10005 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DJY80_10020 PF00089 Trypsin DJY80_10055 PF01695 IstB-like ATP binding protein DJY80_10060 PF02796 Helix-turn-helix domain of resolvase DJY80_10060 PF00665 Integrase core domain DJY80_10070 PF00171 Aldehyde dehydrogenase family DJY80_10070 PF00465 Iron-containing alcohol dehydrogenase DJY80_10080 PF01914 MarC family integral membrane protein DJY80_10085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_10090 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_10095 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_10095 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_10100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_10100 PF00005 ABC transporter DJY80_10105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_10105 PF00005 ABC transporter DJY80_10115 PF04269 Protein of unknown function, DUF440 DJY80_10120 PF13091 PLD-like domain DJY80_10120 PF13396 Phospholipase_D-nuclease N-terminal DJY80_10130 PF13505 Outer membrane protein beta-barrel domain DJY80_10145 PF03795 YCII-related domain DJY80_10150 PF03544 Gram-negative bacterial TonB protein C-terminal DJY80_10155 PF00872 Transposase, Mutator family DJY80_10160 PF03061 Thioesterase superfamily DJY80_10165 PF04279 Intracellular septation protein A DJY80_10195 PF03922 OmpW family DJY80_10205 PF00290 Tryptophan synthase alpha chain DJY80_10210 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_10215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DJY80_10215 PF00218 Indole-3-glycerol phosphate synthase DJY80_10220 PF00591 Glycosyl transferase family, a/b domain DJY80_10220 PF02885 Glycosyl transferase family, helical bundle domain DJY80_10225 PF00117 Glutamine amidotransferase class-I DJY80_10230 PF00425 chorismate binding enzyme DJY80_10230 PF04715 Anthranilate synthase component I, N terminal region DJY80_10245 PF02811 PHP domain DJY80_10250 PF01300 Telomere recombination DJY80_10255 PF00849 RNA pseudouridylate synthase DJY80_10255 PF01479 S4 domain DJY80_10260 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DJY80_10265 PF00106 short chain dehydrogenase DJY80_10270 PF01343 Peptidase family S49 DJY80_10270 PF08496 Peptidase family S49 N-terminal DJY80_10275 PF10692 Protein of unknown function (DUF2498) DJY80_10285 PF01751 Toprim domain DJY80_10285 PF01396 Topoisomerase DNA binding C4 zinc finger DJY80_10285 PF08272 Topoisomerase I zinc-ribbon-like DJY80_10285 PF01131 DNA topoisomerase DJY80_10290 PF03466 LysR substrate binding domain DJY80_10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_10300 PF00694 Aconitase C-terminal domain DJY80_10300 PF00330 Aconitase family (aconitate hydratase) DJY80_10305 PF00925 GTP cyclohydrolase II DJY80_10310 PF01569 PAP2 superfamily DJY80_10315 PF06305 Lipopolysaccharide assembly protein A domain DJY80_10320 PF18073 Rubredoxin metal binding domain DJY80_10330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DJY80_10335 PF01253 Translation initiation factor SUI1 DJY80_10340 PF05433 Glycine zipper 2TM domain DJY80_10345 PF00596 Class II Aldolase and Adducin N-terminal domain DJY80_10355 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJY80_10360 PF04328 Selenoprotein, putative DJY80_10365 PF13722 5TM C-terminal transporter carbon starvation CstA DJY80_10365 PF02554 Carbon starvation protein CstA DJY80_10370 PF00575 S1 RNA binding domain DJY80_10370 PF08206 Ribonuclease B OB domain DJY80_10370 PF00773 RNB domain DJY80_10370 PF17876 Cold shock domain DJY80_10375 PF07690 Major Facilitator Superfamily DJY80_10380 PF01370 NAD dependent epimerase/dehydratase family DJY80_10385 PF10576 Iron-sulfur binding domain of endonuclease III DJY80_10385 PF00730 HhH-GPD superfamily base excision DNA repair protein DJY80_10385 PF00633 Helix-hairpin-helix motif DJY80_10390 PF02508 Rnf-Nqr subunit, membrane protein DJY80_10395 PF04205 FMN-binding domain DJY80_10400 PF03116 NQR2, RnfD, RnfE family DJY80_10405 PF12833 Helix-turn-helix domain DJY80_10405 PF06445 GyrI-like small molecule binding domain DJY80_10410 PF13237 4Fe-4S dicluster domain DJY80_10410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DJY80_10410 PF13375 RnfC Barrel sandwich hybrid domain DJY80_10410 PF10531 SLBB domain DJY80_10415 PF04060 Putative Fe-S cluster DJY80_10420 PF02508 Rnf-Nqr subunit, membrane protein DJY80_10425 PF10754 Protein of unknown function (DUF2569) DJY80_10435 PF13533 Biotin-lipoyl like DJY80_10445 PF00664 ABC transporter transmembrane region DJY80_10445 PF00005 ABC transporter DJY80_10445 PF03412 Peptidase C39 family DJY80_10450 PF02610 L-arabinose isomerase DJY80_10450 PF11762 L-arabinose isomerase C-terminal domain DJY80_10455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_10460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_10465 PF00005 ABC transporter DJY80_10470 PF02653 Branched-chain amino acid transport system / permease component DJY80_10475 PF12833 Helix-turn-helix domain DJY80_10475 PF02311 AraC-like ligand binding domain DJY80_10480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJY80_10480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJY80_10485 PF13593 SBF-like CPA transporter family (DUF4137) DJY80_10495 PF06097 Bacterial protein of unknown function (DUF945) DJY80_10500 PF01238 Phosphomannose isomerase type I DJY80_10505 PF00206 Lyase DJY80_10505 PF10415 Fumarase C C-terminus DJY80_10510 PF05472 DNA replication terminus site-binding protein (Ter protein) DJY80_10515 PF07690 Major Facilitator Superfamily DJY80_10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_10520 PF03466 LysR substrate binding domain DJY80_10525 PF00480 ROK family DJY80_10535 PF00654 Voltage gated chloride channel DJY80_10545 PF00356 Bacterial regulatory proteins, lacI family DJY80_10560 PF09084 NMT1/THI5 like DJY80_10565 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_10570 PF00005 ABC transporter DJY80_10575 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DJY80_10575 PF01048 Phosphorylase superfamily DJY80_10605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_10605 PF00205 Thiamine pyrophosphate enzyme, central domain DJY80_10605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_10610 PF01842 ACT domain DJY80_10615 PF13419 Haloacid dehalogenase-like hydrolase DJY80_10625 PF00245 Alkaline phosphatase DJY80_10630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJY80_10630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJY80_10635 PF00027 Cyclic nucleotide-binding domain DJY80_10635 PF13545 Crp-like helix-turn-helix domain DJY80_10640 PF00582 Universal stress protein family DJY80_10645 PF02233 NAD(P) transhydrogenase beta subunit DJY80_10650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DJY80_10650 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJY80_10650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJY80_10660 PF07338 Protein of unknown function (DUF1471) DJY80_10665 PF13520 Amino acid permease DJY80_10675 PF00486 Transcriptional regulatory protein, C terminal DJY80_10675 PF00072 Response regulator receiver domain DJY80_10680 PF00672 HAMP domain DJY80_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_10680 PF00512 His Kinase A (phospho-acceptor) domain DJY80_10685 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DJY80_10690 PF01797 Transposase IS200 like DJY80_10695 PF00665 Integrase core domain DJY80_10695 PF02796 Helix-turn-helix domain of resolvase DJY80_10700 PF01695 IstB-like ATP binding protein DJY80_10705 PF00265 Thymidine kinase DJY80_10710 PF00816 H-NS histone family DJY80_10715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJY80_10715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJY80_10715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJY80_10720 PF00072 Response regulator receiver domain DJY80_10725 PF02810 SEC-C motif DJY80_10730 PF01842 ACT domain DJY80_10730 PF00551 Formyl transferase DJY80_10735 PF00872 Transposase, Mutator family DJY80_10755 PF03466 LysR substrate binding domain DJY80_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_10760 PF03372 Endonuclease/Exonuclease/phosphatase family DJY80_10765 PF00293 NUDIX domain DJY80_10770 PF07383 Protein of unknown function (DUF1496) DJY80_10775 PF01751 Toprim domain DJY80_10775 PF01131 DNA topoisomerase DJY80_10780 PF00586 AIR synthase related protein, N-terminal domain DJY80_10780 PF02769 AIR synthase related protein, C-terminal domain DJY80_10785 PF00881 Nitroreductase family DJY80_10790 PF01343 Peptidase family S49 DJY80_10795 PF17763 Glutaminase/Asparaginase C-terminal domain DJY80_10795 PF00710 Asparaginase, N-terminal DJY80_10800 PF00857 Isochorismatase family DJY80_10805 PF07023 Protein of unknown function (DUF1315) DJY80_10810 PF01641 SelR domain DJY80_10815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJY80_10815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJY80_10820 PF01263 Aldose 1-epimerase DJY80_10825 PF06629 MltA-interacting protein MipA DJY80_10835 PF06798 PrkA serine protein kinase C-terminal domain DJY80_10835 PF08298 PrkA AAA domain DJY80_10840 PF04285 Protein of unknown function (DUF444) DJY80_10850 PF03466 LysR substrate binding domain DJY80_10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_10855 PF05726 Pirin C-terminal cupin domain DJY80_10855 PF02678 Pirin DJY80_10860 PF07690 Major Facilitator Superfamily DJY80_10865 PF01266 FAD dependent oxidoreductase DJY80_10870 PF04293 SpoVR like protein DJY80_10875 PF07840 FadR C-terminal domain DJY80_10875 PF00392 Bacterial regulatory proteins, gntR family DJY80_10885 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DJY80_10890 PF02600 Disulfide bond formation protein DsbB DJY80_10905 PF00266 Aminotransferase class-V DJY80_10915 PF00872 Transposase, Mutator family DJY80_10925 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DJY80_11080 PF00872 Transposase, Mutator family DJY80_11140 PF06530 Phage antitermination protein Q DJY80_11150 PF05772 NinB protein DJY80_11165 PF01695 IstB-like ATP binding protein DJY80_11170 PF00665 Integrase core domain DJY80_11170 PF02796 Helix-turn-helix domain of resolvase DJY80_11175 PF00589 Phage integrase family DJY80_11175 PF12167 Arm DNA-binding domain DJY80_11180 PF03692 Putative zinc- or iron-chelating domain DJY80_11185 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJY80_11190 PF13406 Transglycosylase SLT domain DJY80_11195 PF05166 YcgL domain DJY80_11200 PF03775 Septum formation inhibitor MinC, C-terminal domain DJY80_11200 PF05209 Septum formation inhibitor MinC, N-terminal domain DJY80_11205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJY80_11210 PF03776 Septum formation topological specificity factor MinE DJY80_11215 PF01612 3'-5' exonuclease DJY80_11215 PF00570 HRDC domain DJY80_11220 PF13193 AMP-binding enzyme C-terminal domain DJY80_11220 PF00501 AMP-binding enzyme DJY80_11230 PF03843 Outer membrane lipoprotein Slp family DJY80_11235 PF00814 Glycoprotease family DJY80_11240 PF13307 Helicase C-terminal domain DJY80_11240 PF04851 Type III restriction enzyme, res subunit DJY80_11245 PF01042 Endoribonuclease L-PSP DJY80_11250 PF00893 Small Multidrug Resistance protein DJY80_11255 PF00893 Small Multidrug Resistance protein DJY80_11260 PF01081 KDPG and KHG aldolase DJY80_11270 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJY80_11270 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJY80_11275 PF01418 Helix-turn-helix domain, rpiR family DJY80_11275 PF01380 SIS domain DJY80_11280 PF00224 Pyruvate kinase, barrel domain DJY80_11280 PF02887 Pyruvate kinase, alpha/beta domain DJY80_11290 PF03279 Bacterial lipid A biosynthesis acyltransferase DJY80_11295 PF08525 Opacity-associated protein A N-terminal motif DJY80_11295 PF01476 LysM domain DJY80_11295 PF01551 Peptidase family M23 DJY80_11300 PF01297 Zinc-uptake complex component A periplasmic DJY80_11305 PF00005 ABC transporter DJY80_11310 PF00950 ABC 3 transport family DJY80_11315 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJY80_11315 PF05491 RuvB C-terminal winged helix domain DJY80_11315 PF17864 RuvB AAA lid domain DJY80_11320 PF07499 RuvA, C-terminal domain DJY80_11320 PF01330 RuvA N terminal domain DJY80_11330 PF02075 Crossover junction endodeoxyribonuclease RuvC DJY80_11335 PF01709 Transcriptional regulator DJY80_11340 PF00293 NUDIX domain DJY80_11345 PF00152 tRNA synthetases class II (D, K and N) DJY80_11345 PF02938 GAD domain DJY80_11345 PF01336 OB-fold nucleic acid binding domain DJY80_11350 PF01904 Protein of unknown function DUF72 DJY80_11355 PF01124 MAPEG family DJY80_11360 PF13649 Methyltransferase domain DJY80_11365 PF08003 Protein of unknown function (DUF1698) DJY80_11370 PF03932 CutC family DJY80_11375 PF06185 YecM protein DJY80_11380 PF00750 tRNA synthetases class I (R) DJY80_11380 PF05746 DALR anticodon binding domain DJY80_11380 PF03485 Arginyl tRNA synthetase N terminal domain DJY80_11385 PF13332 Hemagglutinin repeat DJY80_11385 PF05860 haemagglutination activity domain DJY80_11390 PF08479 POTRA domain, ShlB-type DJY80_11390 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJY80_11390 PF17287 POTRA domain DJY80_11395 PF03023 Lipid II flippase MurJ DJY80_11400 PF04337 Protein of unknown function, DUF480 DJY80_11405 PF13302 Acetyltransferase (GNAT) domain DJY80_11410 PF07690 Major Facilitator Superfamily DJY80_11415 PF07273 Protein of unknown function (DUF1439) DJY80_11420 PF02613 Nitrate reductase delta subunit DJY80_11425 PF02811 PHP domain DJY80_11435 PF01325 Iron dependent repressor, N-terminal DNA binding domain DJY80_11435 PF00480 ROK family DJY80_11440 PF03009 Glycerophosphoryl diester phosphodiesterase family DJY80_11450 PF01797 Transposase IS200 like DJY80_11455 PF00005 ABC transporter DJY80_11455 PF08402 TOBE domain DJY80_11460 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_11465 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_11475 PF03009 Glycerophosphoryl diester phosphodiesterase family DJY80_11490 PF00916 Sulfate permease family DJY80_11490 PF01740 STAS domain DJY80_11495 PF00793 DAHP synthetase I family DJY80_11500 PF13369 Transglutaminase-like superfamily DJY80_11505 PF04247 Invasion gene expression up-regulator, SirB DJY80_11510 PF17827 PrmC N-terminal domain DJY80_11510 PF13847 Methyltransferase domain DJY80_11515 PF03462 PCRF domain DJY80_11515 PF00472 RF-1 domain DJY80_11520 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DJY80_11520 PF01488 Shikimate / quinate 5-dehydrogenase DJY80_11520 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DJY80_11525 PF03550 Outer membrane lipoprotein LolB DJY80_11530 PF08544 GHMP kinases C terminal DJY80_11530 PF00288 GHMP kinases N terminal domain DJY80_11535 PF14572 Phosphoribosyl synthetase-associated domain DJY80_11535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DJY80_11540 PF10762 Protein of unknown function (DUF2583) DJY80_11545 PF01195 Peptidyl-tRNA hydrolase DJY80_11550 PF06071 Protein of unknown function (DUF933) DJY80_11550 PF01926 50S ribosome-binding GTPase DJY80_11595 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJY80_11600 PF00486 Transcriptional regulatory protein, C terminal DJY80_11600 PF00072 Response regulator receiver domain DJY80_11605 PF00512 His Kinase A (phospho-acceptor) domain DJY80_11605 PF00672 HAMP domain DJY80_11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_11645 PF08242 Methyltransferase domain DJY80_11670 PF00872 Transposase, Mutator family DJY80_11715 PF01370 NAD dependent epimerase/dehydratase family DJY80_11730 PF05962 HutD DJY80_11735 PF01979 Amidohydrolase family DJY80_11740 PF00392 Bacterial regulatory proteins, gntR family DJY80_11740 PF07702 UTRA domain DJY80_11745 PF01979 Amidohydrolase family DJY80_11760 PF01695 IstB-like ATP binding protein DJY80_11765 PF02796 Helix-turn-helix domain of resolvase DJY80_11765 PF00665 Integrase core domain DJY80_11775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_11775 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_11780 PF00577 Outer membrane usher protein DJY80_11780 PF13954 PapC N-terminal domain DJY80_11780 PF13953 PapC C-terminal domain DJY80_11790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_11790 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_11800 PF13356 Arm DNA-binding domain DJY80_11800 PF00589 Phage integrase family DJY80_11805 PF00425 chorismate binding enzyme DJY80_11810 PF07690 Major Facilitator Superfamily DJY80_11815 PF00664 ABC transporter transmembrane region DJY80_11815 PF00005 ABC transporter DJY80_11820 PF00664 ABC transporter transmembrane region DJY80_11820 PF00005 ABC transporter DJY80_11820 PF08021 Siderophore-interacting FAD-binding domain DJY80_11820 PF04954 Siderophore-interacting protein DJY80_11830 PF08242 Methyltransferase domain DJY80_11830 PF00550 Phosphopantetheine attachment site DJY80_11830 PF00501 AMP-binding enzyme DJY80_11830 PF00668 Condensation domain DJY80_11835 PF16197 Ketoacyl-synthetase C-terminal extension DJY80_11835 PF00698 Acyl transferase domain DJY80_11835 PF02801 Beta-ketoacyl synthase, C-terminal domain DJY80_11835 PF00550 Phosphopantetheine attachment site DJY80_11835 PF00668 Condensation domain DJY80_11835 PF00109 Beta-ketoacyl synthase, N-terminal domain DJY80_11845 PF00975 Thioesterase domain DJY80_11850 PF00501 AMP-binding enzyme DJY80_11850 PF13193 AMP-binding enzyme C-terminal domain DJY80_11855 PF07715 TonB-dependent Receptor Plug Domain DJY80_11855 PF00593 TonB dependent receptor DJY80_11900 PF01695 IstB-like ATP binding protein DJY80_11905 PF02796 Helix-turn-helix domain of resolvase DJY80_11905 PF00665 Integrase core domain DJY80_11930 PF00005 ABC transporter DJY80_11930 PF08402 TOBE domain DJY80_11935 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_11940 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_11950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJY80_11950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJY80_12040 PF05638 Type VI secretion system effector, Hcp DJY80_12095 PF01066 CDP-alcohol phosphatidyltransferase DJY80_12100 PF02151 UvrB/uvrC motif DJY80_12100 PF01541 GIY-YIG catalytic domain DJY80_12100 PF08459 UvrC Helix-hairpin-helix N-terminal DJY80_12105 PF00072 Response regulator receiver domain DJY80_12105 PF00196 Bacterial regulatory proteins, luxR family DJY80_12110 PF10769 Protein of unknown function (DUF2594) DJY80_12115 PF06942 GlpM protein DJY80_12130 PF13505 Outer membrane protein beta-barrel domain DJY80_12140 PF00324 Amino acid permease DJY80_12145 PF01344 Kelch motif DJY80_12150 PF03358 NADPH-dependent FMN reductase DJY80_12155 PF04261 Dyp-type peroxidase family DJY80_12160 PF09375 Imelysin DJY80_12160 PF13473 Cupredoxin-like domain DJY80_12165 PF03239 Iron permease FTR1 family DJY80_12170 PF00474 Sodium:solute symporter family DJY80_12180 PF00171 Aldehyde dehydrogenase family DJY80_12180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DJY80_12180 PF14850 DNA-binding domain of Proline dehydrogenase DJY80_12180 PF01619 Proline dehydrogenase DJY80_12210 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_12215 PF02899 Phage integrase, N-terminal SAM-like domain DJY80_12220 PF04542 Sigma-70 region 2 DJY80_12220 PF04545 Sigma-70, region 4 DJY80_12220 PF04539 Sigma-70 region 3 DJY80_12225 PF00669 Bacterial flagellin N-terminal helical region DJY80_12225 PF08884 Flagellin D3 domain DJY80_12225 PF00700 Bacterial flagellin C-terminal helical region DJY80_12230 PF07196 Flagellin hook IN motif DJY80_12230 PF02465 Flagellar hook-associated protein 2 N-terminus DJY80_12230 PF07195 Flagellar hook-associated protein 2 C-terminus DJY80_12235 PF02561 Flagellar protein FliS DJY80_12240 PF05400 Flagellar protein FliT DJY80_12250 PF12833 Helix-turn-helix domain DJY80_12255 PF02743 Cache domain DJY80_12255 PF00672 HAMP domain DJY80_12255 PF00211 Adenylate and Guanylate cyclase catalytic domain DJY80_12260 PF01966 HD domain DJY80_12265 PF00730 HhH-GPD superfamily base excision DNA repair protein DJY80_12285 PF02049 Flagellar hook-basal body complex protein FliE DJY80_12290 PF08345 Flagellar M-ring protein C-terminal DJY80_12290 PF01514 Secretory protein of YscJ/FliF family DJY80_12295 PF14842 FliG N-terminal domain DJY80_12295 PF01706 FliG C-terminal domain DJY80_12295 PF14841 FliG middle domain DJY80_12300 PF02108 Flagellar assembly protein FliH DJY80_12305 PF18269 T3SS EscN ATPase C-terminal domain DJY80_12305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_12310 PF02050 Flagellar FliJ protein DJY80_12315 PF02120 Flagellar hook-length control protein FliK DJY80_12320 PF03748 Flagellar basal body-associated protein FliL DJY80_12325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJY80_12325 PF02154 Flagellar motor switch protein FliM DJY80_12330 PF16973 Flagellar motor switch protein FliN N-terminal DJY80_12330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJY80_12335 PF04347 Flagellar biosynthesis protein, FliO DJY80_12340 PF00813 FliP family DJY80_12345 PF01313 Bacterial export proteins, family 3 DJY80_12350 PF01311 Bacterial export proteins, family 1 DJY80_12365 PF00294 pfkB family carbohydrate kinase DJY80_12370 PF02653 Branched-chain amino acid transport system / permease component DJY80_12375 PF00005 ABC transporter DJY80_12380 PF13407 Periplasmic binding protein domain DJY80_12385 PF02653 Branched-chain amino acid transport system / permease component DJY80_12390 PF00596 Class II Aldolase and Adducin N-terminal domain DJY80_12395 PF04198 Putative sugar-binding domain DJY80_12400 PF00669 Bacterial flagellin N-terminal helical region DJY80_12405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_12405 PF00460 Flagella basal body rod protein DJY80_12410 PF10135 Rod binding protein DJY80_12410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DJY80_12415 PF02119 Flagellar P-ring protein DJY80_12420 PF02107 Flagellar L-ring protein DJY80_12425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_12425 PF00460 Flagella basal body rod protein DJY80_12435 PF07559 Flagellar basal body protein FlaE DJY80_12435 PF00460 Flagella basal body rod protein DJY80_12435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_12440 PF03963 Flagellar hook capping protein - N-terminal region DJY80_12440 PF13860 FlgD Ig-like domain DJY80_12440 PF13861 FlgD Tudor-like domain DJY80_12445 PF00460 Flagella basal body rod protein DJY80_12445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_12450 PF00460 Flagella basal body rod protein DJY80_12455 PF13144 Chaperone for flagella basal body P-ring formation DJY80_12455 PF17656 FlgA N-terminal domain DJY80_12460 PF04316 Anti-sigma-28 factor, FlgM DJY80_12465 PF05130 FlgN protein DJY80_12475 PF01797 Transposase IS200 like DJY80_12485 PF06366 Flagellar protein FlhE DJY80_12490 PF00771 FHIPEP family DJY80_12495 PF01312 FlhB HrpN YscU SpaS Family DJY80_12515 PF10709 Protein of unknown function (DUF2511) DJY80_12525 PF04234 CopC domain DJY80_12530 PF00210 Ferritin-like domain DJY80_12535 PF06440 DNA polymerase III, theta subunit DJY80_12540 PF00561 alpha/beta hydrolase fold DJY80_12545 PF00326 Prolyl oligopeptidase family DJY80_12545 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DJY80_12550 PF13995 YebF-like protein DJY80_12560 PF07130 YebG protein DJY80_12565 PF00270 DEAD/DEAH box helicase DJY80_12565 PF03880 DbpA RNA binding domain DJY80_12565 PF00271 Helicase conserved C-terminal domain DJY80_12570 PF02222 ATP-grasp domain DJY80_12575 PF03701 Uncharacterised protein family (UPF0181) DJY80_12580 PF00425 chorismate binding enzyme DJY80_12580 PF04715 Anthranilate synthase component I, N terminal region DJY80_12585 PF00293 NUDIX domain DJY80_12590 PF03315 Serine dehydratase beta chain DJY80_12590 PF03313 Serine dehydratase alpha chain DJY80_12595 PF01613 Flavin reductase like domain DJY80_12600 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DJY80_12600 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DJY80_12605 PF07690 Major Facilitator Superfamily DJY80_12610 PF03328 HpcH/HpaI aldolase/citrate lyase family DJY80_12615 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJY80_12620 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DJY80_12625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJY80_12630 PF00171 Aldehyde dehydrogenase family DJY80_12635 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJY80_12640 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJY80_12645 PF01047 MarR family DJY80_12655 PF03471 Transporter associated domain DJY80_12655 PF03741 Integral membrane protein TerC family DJY80_12660 PF03610 PTS system fructose IIA component DJY80_12660 PF03830 PTS system sorbose subfamily IIB component DJY80_12665 PF03609 PTS system sorbose-specific iic component DJY80_12670 PF03613 PTS system mannose/fructose/sorbose family IID component DJY80_12675 PF06173 Protein of unknown function (DUF986) DJY80_12685 PF00665 Integrase core domain DJY80_12685 PF02796 Helix-turn-helix domain of resolvase DJY80_12690 PF01695 IstB-like ATP binding protein DJY80_12695 PF00356 Bacterial regulatory proteins, lacI family DJY80_12695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_12705 PF06167 Glucose-regulated metallo-peptidase M90 DJY80_12725 PF00664 ABC transporter transmembrane region DJY80_12725 PF00005 ABC transporter DJY80_12740 PF12833 Helix-turn-helix domain DJY80_12745 PF10964 Protein of unknown function (DUF2766) DJY80_12750 PF13996 YobH-like protein DJY80_12755 PF13998 MgrB protein DJY80_12760 PF13974 YebO-like protein DJY80_12780 PF00324 Amino acid permease DJY80_12795 PF10736 Protein of unknown function (DUF2627) DJY80_12800 PF00313 'Cold-shock' DNA-binding domain DJY80_12810 PF13847 Methyltransferase domain DJY80_12825 PF07715 TonB-dependent Receptor Plug Domain DJY80_12825 PF00593 TonB dependent receptor DJY80_12835 PF01695 IstB-like ATP binding protein DJY80_12840 PF02796 Helix-turn-helix domain of resolvase DJY80_12840 PF00665 Integrase core domain DJY80_12855 PF00872 Transposase, Mutator family DJY80_12860 PF01306 LacY proton/sugar symporter DJY80_12865 PF16874 Glycosyl hydrolase family 36 C-terminal domain DJY80_12865 PF16875 Glycosyl hydrolase family 36 N-terminal domain DJY80_12880 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DJY80_12880 PF01648 4'-phosphopantetheinyl transferase superfamily DJY80_12885 PF03480 Bacterial extracellular solute-binding protein, family 7 DJY80_12895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DJY80_12900 PF00072 Response regulator receiver domain DJY80_12900 PF00196 Bacterial regulatory proteins, luxR family DJY80_12910 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DJY80_12920 PF01522 Polysaccharide deacetylase DJY80_12930 PF01554 MatE DJY80_12935 PF00764 Arginosuccinate synthase DJY80_12940 PF01070 FMN-dependent dehydrogenase DJY80_12950 PF13378 Enolase C-terminal domain-like DJY80_12950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJY80_12955 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJY80_12965 PF04134 Protein of unknown function, DUF393 DJY80_12970 PF07690 Major Facilitator Superfamily DJY80_12975 PF09134 Invasin, domain 3 DJY80_12975 PF11924 Inverse autotransporter, beta-domain DJY80_12975 PF02369 Bacterial Ig-like domain (group 1) DJY80_12980 PF00872 Transposase, Mutator family DJY80_12985 PF04363 Protein of unknown function (DUF496) DJY80_12995 PF08411 Exonuclease C-terminal DJY80_12995 PF00929 Exonuclease DJY80_13005 PF13520 Amino acid permease DJY80_13015 PF00465 Iron-containing alcohol dehydrogenase DJY80_13020 PF00005 ABC transporter DJY80_13025 PF00005 ABC transporter DJY80_13030 PF02653 Branched-chain amino acid transport system / permease component DJY80_13035 PF01370 NAD dependent epimerase/dehydratase family DJY80_13045 PF01634 ATP phosphoribosyltransferase DJY80_13045 PF08029 HisG, C-terminal domain DJY80_13050 PF00815 Histidinol dehydrogenase DJY80_13055 PF00155 Aminotransferase class I and II DJY80_13060 PF00475 Imidazoleglycerol-phosphate dehydratase DJY80_13065 PF00117 Glutamine amidotransferase class-I DJY80_13070 PF00977 Histidine biosynthesis protein DJY80_13075 PF00977 Histidine biosynthesis protein DJY80_13080 PF01502 Phosphoribosyl-AMP cyclohydrolase DJY80_13080 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DJY80_13085 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJY80_13085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJY80_13090 PF00483 Nucleotidyl transferase DJY80_13095 PF00483 Nucleotidyl transferase DJY80_13100 PF04183 IucA / IucC family DJY80_13100 PF06276 Ferric iron reductase FhuF-like transporter DJY80_13105 PF00593 TonB dependent receptor DJY80_13105 PF07660 Secretin and TonB N terminus short domain DJY80_13105 PF07715 TonB-dependent Receptor Plug Domain DJY80_13110 PF01497 Periplasmic binding protein DJY80_13115 PF01032 FecCD transport family DJY80_13120 PF01032 FecCD transport family DJY80_13125 PF00005 ABC transporter DJY80_13130 PF06276 Ferric iron reductase FhuF-like transporter DJY80_13130 PF04183 IucA / IucC family DJY80_13140 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DJY80_13145 PF00282 Pyridoxal-dependent decarboxylase conserved domain DJY80_13150 PF06276 Ferric iron reductase FhuF-like transporter DJY80_13150 PF11575 FhuF 2Fe-2S C-terminal domain DJY80_13155 PF00571 CBS domain DJY80_13155 PF03471 Transporter associated domain DJY80_13155 PF03741 Integral membrane protein TerC family DJY80_13160 PF05170 AsmA family DJY80_13165 PF00692 dUTPase DJY80_13170 PF00485 Phosphoribulokinase / Uridine kinase family DJY80_13175 PF10609 NUBPL iron-transfer P-loop NTPase DJY80_13180 PF09334 tRNA synthetases class I (M) DJY80_13180 PF01588 Putative tRNA binding domain DJY80_13185 PF01797 Transposase IS200 like DJY80_13205 PF07690 Major Facilitator Superfamily DJY80_13210 PF03788 LrgA family DJY80_13215 PF04172 LrgB-like family DJY80_13220 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DJY80_13220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJY80_13225 PF00390 Malic enzyme, N-terminal domain DJY80_13225 PF03949 Malic enzyme, NAD binding domain DJY80_13230 PF02698 DUF218 domain DJY80_13235 PF02653 Branched-chain amino acid transport system / permease component DJY80_13240 PF00005 ABC transporter DJY80_13245 PF13407 Periplasmic binding protein domain DJY80_13250 PF04235 Protein of unknown function (DUF418) DJY80_13255 PF01227 GTP cyclohydrolase I DJY80_13260 PF06779 Uncharacterised MFS-type transporter YbfB DJY80_13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_13265 PF03466 LysR substrate binding domain DJY80_13270 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_13270 PF00107 Zinc-binding dehydrogenase DJY80_13275 PF00756 Putative esterase DJY80_13290 PF13533 Biotin-lipoyl like DJY80_13295 PF00005 ABC transporter DJY80_13305 PF00994 Probable molybdopterin binding domain DJY80_13305 PF03454 MoeA C-terminal region (domain IV) DJY80_13305 PF03453 MoeA N-terminal region (domain I and II) DJY80_13310 PF00899 ThiF family DJY80_13315 PF00872 Transposase, Mutator family DJY80_13325 PF00005 ABC transporter DJY80_13325 PF12848 ABC transporter DJY80_13420 PF07724 AAA domain (Cdc48 subfamily) DJY80_13420 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_13420 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_13420 PF17871 AAA lid domain DJY80_13430 PF05736 OprF membrane domain DJY80_13430 PF00691 OmpA family DJY80_13455 PF00698 Acyl transferase domain DJY80_13460 PF00550 Phosphopantetheine attachment site DJY80_13475 PF00378 Enoyl-CoA hydratase/isomerase DJY80_13485 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DJY80_13485 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DJY80_13495 PF00109 Beta-ketoacyl synthase, N-terminal domain DJY80_13495 PF02801 Beta-ketoacyl synthase, C-terminal domain DJY80_13500 PF07977 FabA-like domain DJY80_13515 PF08031 Berberine and berberine like DJY80_13515 PF01565 FAD binding domain DJY80_13535 PF04358 DsrC like protein DJY80_13540 PF00708 Acylphosphatase DJY80_13545 PF10672 S-adenosylmethionine-dependent methyltransferase DJY80_13545 PF17785 PUA-like domain DJY80_13550 PF08755 Hemimethylated DNA-binding protein YccV like DJY80_13555 PF13380 CoA binding domain DJY80_13560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DJY80_13565 PF02142 MGS-like domain DJY80_13570 PF00580 UvrD/REP helicase N-terminal domain DJY80_13570 PF13361 UvrD-like helicase C-terminal domain DJY80_13570 PF12462 DNA helicase IV / RNA helicase N terminal DJY80_13575 PF03733 Inner membrane component domain DJY80_13580 PF12805 FUSC-like inner membrane protein yccS DJY80_13585 PF04994 TfoX C-terminal domain DJY80_13585 PF04993 TfoX N-terminal domain DJY80_13590 PF03846 Cell division inhibitor SulA DJY80_13595 PF01389 OmpA-like transmembrane domain DJY80_13595 PF00691 OmpA family DJY80_13600 PF01797 Transposase IS200 like DJY80_13605 PF17414 MatP C-terminal ribbon-helix-helix domain DJY80_13605 PF06303 MatP N-terminal domain DJY80_13610 PF13654 AAA domain DJY80_13610 PF05362 Lon protease (S16) C-terminal proteolytic domain DJY80_13615 PF07977 FabA-like domain DJY80_13630 PF02796 Helix-turn-helix domain of resolvase DJY80_13630 PF00665 Integrase core domain DJY80_13635 PF01695 IstB-like ATP binding protein DJY80_13645 PF01797 Transposase IS200 like DJY80_13650 PF04957 Ribosome modulation factor DJY80_13660 PF03886 ABC-type transport auxiliary lipoprotein component DJY80_13665 PF02470 MlaD protein DJY80_13670 PF04403 Paraquat-inducible protein A DJY80_13675 PF00005 ABC transporter DJY80_13675 PF12848 ABC transporter DJY80_13675 PF16326 ABC transporter C-terminal domain DJY80_13680 PF01170 Putative RNA methylase family UPF0020 DJY80_13680 PF10672 S-adenosylmethionine-dependent methyltransferase DJY80_13680 PF02926 THUMP domain DJY80_13685 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_13685 PF03473 MOSC domain DJY80_13685 PF03476 MOSC N-terminal beta barrel domain DJY80_13690 PF07126 Cell-division protein ZapC DJY80_13695 PF01180 Dihydroorotate dehydrogenase DJY80_13700 PF01433 Peptidase family M1 domain DJY80_13700 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DJY80_13700 PF11940 Domain of unknown function (DUF3458) Ig-like fold DJY80_13705 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DJY80_13705 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DJY80_13710 PF01336 OB-fold nucleic acid binding domain DJY80_13710 PF00152 tRNA synthetases class II (D, K and N) DJY80_13715 PF00267 Gram-negative porin DJY80_13720 PF00155 Aminotransferase class I and II DJY80_13730 PF00753 Metallo-beta-lactamase superfamily DJY80_13735 PF05951 Bacterial protein of unknown function (DUF882) DJY80_13740 PF01471 Putative peptidoglycan binding domain DJY80_13740 PF03734 L,D-transpeptidase catalytic domain DJY80_13745 PF01797 Transposase IS200 like DJY80_13750 PF16330 MukB hinge domain DJY80_13750 PF04310 MukB N-terminal DJY80_13755 PF04288 MukE-like family DJY80_13760 PF03882 MukF winged-helix domain DJY80_13760 PF17193 MukF C-terminal domain DJY80_13760 PF17192 MukF middle domain DJY80_13780 PF01636 Phosphotransferase enzyme family DJY80_13790 PF02348 Cytidylyltransferase DJY80_13795 PF03966 Trm112p-like protein DJY80_13800 PF00313 'Cold-shock' DNA-binding domain DJY80_13810 PF07063 Domain of unknown function (DUF1338) DJY80_13815 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DJY80_13820 PF00664 ABC transporter transmembrane region DJY80_13820 PF00005 ABC transporter DJY80_13825 PF00753 Metallo-beta-lactamase superfamily DJY80_13825 PF03772 Competence protein DJY80_13835 PF00216 Bacterial DNA-binding protein DJY80_13840 PF00575 S1 RNA binding domain DJY80_13845 PF02224 Cytidylate kinase DJY80_13850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJY80_13855 PF00266 Aminotransferase class-V DJY80_13865 PF05658 Head domain of trimeric autotransporter adhesin DJY80_13865 PF05662 Coiled stalk of trimeric autotransporter adhesin DJY80_13865 PF05658 Head domain of trimeric autotransporter adhesin DJY80_13865 PF03895 YadA-like membrane anchor domain DJY80_13865 PF03895 YadA-like membrane anchor domain DJY80_13865 PF05662 Coiled stalk of trimeric autotransporter adhesin DJY80_13865 PF13018 Extended Signal Peptide of Type V secretion system DJY80_13865 PF13018 Extended Signal Peptide of Type V secretion system DJY80_13870 PF00710 Asparaginase, N-terminal DJY80_13870 PF17763 Glutaminase/Asparaginase C-terminal domain DJY80_13875 PF18381 YcaO cyclodehydratase C-terminal domain DJY80_13875 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DJY80_13880 PF01226 Formate/nitrite transporter DJY80_13885 PF02901 Pyruvate formate lyase-like DJY80_13885 PF01228 Glycine radical DJY80_13895 PF04055 Radical SAM superfamily DJY80_13905 PF00665 Integrase core domain DJY80_13905 PF02796 Helix-turn-helix domain of resolvase DJY80_13910 PF01695 IstB-like ATP binding protein DJY80_13920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJY80_13920 PF02403 Seryl-tRNA synthetase N-terminal domain DJY80_13925 PF12002 MgsA AAA+ ATPase C terminal DJY80_13925 PF16193 AAA C-terminal domain DJY80_13925 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_13930 PF03548 Outer membrane lipoprotein carrier protein LolA DJY80_13935 PF09397 Ftsk gamma domain DJY80_13935 PF01580 FtsK/SpoIIIE family DJY80_13935 PF17854 FtsK alpha domain DJY80_13935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DJY80_13940 PF01037 Lrp/AsnC ligand binding domain DJY80_13945 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_13950 PF00005 ABC transporter DJY80_13950 PF00664 ABC transporter transmembrane region DJY80_13955 PF00664 ABC transporter transmembrane region DJY80_13955 PF00005 ABC transporter DJY80_13960 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DJY80_13965 PF01176 Translation initiation factor 1A / IF-1 DJY80_13975 PF01797 Transposase IS200 like DJY80_13980 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_13980 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_13980 PF02861 Clp amino terminal domain, pathogenicity island component DJY80_13980 PF17871 AAA lid domain DJY80_13980 PF07724 AAA domain (Cdc48 subfamily) DJY80_13985 PF02617 ATP-dependent Clp protease adaptor protein ClpS DJY80_13995 PF00313 'Cold-shock' DNA-binding domain DJY80_14000 PF00005 ABC transporter DJY80_14000 PF02687 FtsX-like permease family DJY80_14000 PF12704 MacB-like periplasmic core domain DJY80_14005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_14010 PF04393 Protein of unknown function (DUF535) DJY80_14015 PF11398 Protein of unknown function (DUF2813) DJY80_14020 PF03956 Lysine exporter LysO DJY80_14025 PF03063 Prismane/CO dehydrogenase family DJY80_14030 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_14030 PF00970 Oxidoreductase FAD-binding domain DJY80_14030 PF00175 Oxidoreductase NAD-binding domain DJY80_14035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_14035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_14035 PF00205 Thiamine pyrophosphate enzyme, central domain DJY80_14045 PF01212 Beta-eliminating lyase DJY80_14050 PF11066 Protein of unknown function (DUF2867) DJY80_14050 PF13460 NAD(P)H-binding DJY80_14055 PF01370 NAD dependent epimerase/dehydratase family DJY80_14060 PF12883 Protein of unknown function (DUF3828) DJY80_14065 PF01817 Chorismate mutase type II DJY80_14070 PF00005 ABC transporter DJY80_14075 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_14080 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14085 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14090 PF00892 EamA-like transporter family DJY80_14095 PF10100 Staphylopine dehydrogenase DJY80_14100 PF03059 Nicotianamine synthase protein DJY80_14105 PF00005 ABC transporter DJY80_14110 PF01032 FecCD transport family DJY80_14115 PF01032 FecCD transport family DJY80_14140 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_14145 PF05958 tRNA (Uracil-5-)-methyltransferase DJY80_14150 PF10767 Protein of unknown function (DUF2593) DJY80_14155 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14160 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14165 PF08402 TOBE domain DJY80_14165 PF00005 ABC transporter DJY80_14170 PF13416 Bacterial extracellular solute-binding protein DJY80_14175 PF10722 Putative bacterial sensory transduction regulator DJY80_14185 PF07214 Protein of unknown function (DUF1418) DJY80_14190 PF00462 Glutaredoxin DJY80_14195 PF02080 TrkA-C domain DJY80_14195 PF06826 Predicted Permease Membrane Region DJY80_14205 PF01569 PAP2 superfamily DJY80_14210 PF01791 DeoC/LacD family aldolase DJY80_14215 PF00455 DeoR C terminal sensor domain DJY80_14215 PF08220 DeoR-like helix-turn-helix domain DJY80_14225 PF07943 Penicillin-binding protein 5, C-terminal domain DJY80_14225 PF00768 D-alanyl-D-alanine carboxypeptidase DJY80_14230 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14235 PF09383 NIL domain DJY80_14235 PF00005 ABC transporter DJY80_14240 PF03180 NLPA lipoprotein DJY80_14255 PF00043 Glutathione S-transferase, C-terminal domain DJY80_14255 PF13417 Glutathione S-transferase, N-terminal domain DJY80_14265 PF07715 TonB-dependent Receptor Plug Domain DJY80_14265 PF00593 TonB dependent receptor DJY80_14270 PF00005 ABC transporter DJY80_14275 PF01032 FecCD transport family DJY80_14285 PF00324 Amino acid permease DJY80_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_14290 PF03466 LysR substrate binding domain DJY80_14295 PF03601 Conserved hypothetical protein 698 DJY80_14300 PF01261 Xylose isomerase-like TIM barrel DJY80_14305 PF13953 PapC C-terminal domain DJY80_14305 PF13954 PapC N-terminal domain DJY80_14305 PF00577 Outer membrane usher protein DJY80_14310 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_14310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_14320 PF17550 Family of unknown function DJY80_14325 PF00486 Transcriptional regulatory protein, C terminal DJY80_14330 PF02378 Phosphotransferase system, EIIC DJY80_14330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJY80_14335 PF00294 pfkB family carbohydrate kinase DJY80_14340 PF00381 PTS HPr component phosphorylation site DJY80_14340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJY80_14345 PF00293 NUDIX domain DJY80_14350 PF02653 Branched-chain amino acid transport system / permease component DJY80_14355 PF00005 ABC transporter DJY80_14365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DJY80_14370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_14370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_14375 PF00171 Aldehyde dehydrogenase family DJY80_14385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_14385 PF01842 ACT domain DJY80_14385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_14395 PF03692 Putative zinc- or iron-chelating domain DJY80_14400 PF03222 Tryptophan/tyrosine permease family DJY80_14405 PF08207 Elongation factor P (EF-P) KOW-like domain DJY80_14405 PF09285 Elongation factor P, C-terminal DJY80_14405 PF01132 Elongation factor P (EF-P) OB domain DJY80_14410 PF03786 D-mannonate dehydratase (UxuA) DJY80_14415 PF08125 Mannitol dehydrogenase C-terminal domain DJY80_14415 PF01232 Mannitol dehydrogenase Rossmann domain DJY80_14420 PF07729 FCD domain DJY80_14420 PF00392 Bacterial regulatory proteins, gntR family DJY80_14430 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJY80_14430 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJY80_14435 PF01569 PAP2 superfamily DJY80_14440 PF00877 NlpC/P60 family DJY80_14445 PF12792 CSS motif domain associated with EAL DJY80_14445 PF00563 EAL domain DJY80_14450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_14455 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14460 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_14460 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_14465 PF00005 ABC transporter DJY80_14470 PF13989 YejG-like protein DJY80_14475 PF07690 Major Facilitator Superfamily DJY80_14480 PF01479 S4 domain DJY80_14480 PF00849 RNA pseudouridylate synthase DJY80_14485 PF04851 Type III restriction enzyme, res subunit DJY80_14485 PF00271 Helicase conserved C-terminal domain DJY80_14490 PF01386 Ribosomal L25p family DJY80_14500 PF01797 Transposase IS200 like DJY80_14505 PF04245 37-kD nucleoid-associated bacterial protein DJY80_14510 PF07208 Protein of unknown function (DUF1414) DJY80_14515 PF11893 Domain of unknown function (DUF3413) DJY80_14515 PF00884 Sulfatase DJY80_14535 PF05638 Type VI secretion system effector, Hcp DJY80_14540 PF02796 Helix-turn-helix domain of resolvase DJY80_14540 PF00665 Integrase core domain DJY80_14545 PF01695 IstB-like ATP binding protein DJY80_14565 PF00232 Glycosyl hydrolase family 1 DJY80_14570 PF01418 Helix-turn-helix domain, rpiR family DJY80_14570 PF01380 SIS domain DJY80_14575 PF07484 Phage Tail Collar Domain DJY80_14590 PF04865 Baseplate J-like protein DJY80_14630 PF17482 Phage tail sheath C-terminal domain DJY80_14630 PF04984 Phage tail sheath protein subtilisin-like domain DJY80_14650 PF01261 Xylose isomerase-like TIM barrel DJY80_14655 PF00455 DeoR C terminal sensor domain DJY80_14655 PF08220 DeoR-like helix-turn-helix domain DJY80_14660 PF00596 Class II Aldolase and Adducin N-terminal domain DJY80_14665 PF07005 Sugar-binding N-terminal domain DJY80_14665 PF17042 Nucleotide-binding C-terminal domain DJY80_14670 PF06530 Phage antitermination protein Q DJY80_14675 PF00717 Peptidase S24-like DJY80_14675 PF01381 Helix-turn-helix DJY80_14680 PF06183 DinI-like family DJY80_14685 PF01278 Omptin family DJY80_14695 PF00672 HAMP domain DJY80_14695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_14695 PF02743 Cache domain DJY80_14700 PF12706 Beta-lactamase superfamily domain DJY80_14710 PF00144 Beta-lactamase DJY80_14730 PF01797 Transposase IS200 like DJY80_14735 PF00267 Gram-negative porin DJY80_14740 PF07690 Major Facilitator Superfamily DJY80_14745 PF16359 RcsD-ABL domain DJY80_14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_14745 PF01627 Hpt domain DJY80_14750 PF01627 Hpt domain DJY80_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_14750 PF16359 RcsD-ABL domain DJY80_14755 PF00072 Response regulator receiver domain DJY80_14755 PF00196 Bacterial regulatory proteins, luxR family DJY80_14760 PF00512 His Kinase A (phospho-acceptor) domain DJY80_14760 PF09456 RcsC Alpha-Beta-Loop (ABL) DJY80_14760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_14760 PF00072 Response regulator receiver domain DJY80_14765 PF03989 DNA gyrase C-terminal domain, beta-propeller DJY80_14765 PF00521 DNA gyrase/topoisomerase IV, subunit A DJY80_14775 PF03477 ATP cone domain DJY80_14775 PF00317 Ribonucleotide reductase, all-alpha domain DJY80_14775 PF02867 Ribonucleotide reductase, barrel domain DJY80_14780 PF00268 Ribonucleotide reductase, small chain DJY80_14785 PF00111 2Fe-2S iron-sulfur cluster binding domain DJY80_14790 PF03974 Ecotin DJY80_14795 PF00994 Probable molybdopterin binding domain DJY80_14800 PF03222 Tryptophan/tyrosine permease family DJY80_14805 PF07437 YfaZ precursor DJY80_14810 PF06628 Catalase-related immune-responsive DJY80_14810 PF00199 Catalase DJY80_14815 PF06733 DEAD_2 DJY80_14815 PF13307 Helicase C-terminal domain DJY80_14820 PF00267 Gram-negative porin DJY80_14830 PF00892 EamA-like transporter family DJY80_14840 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJY80_14840 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DJY80_14840 PF01276 Orn/Lys/Arg decarboxylase, major domain DJY80_14845 PF13520 Amino acid permease DJY80_14850 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14855 PF00005 ABC transporter DJY80_14860 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14870 PF00581 Rhodanese-like domain DJY80_14885 PF00005 ABC transporter DJY80_14890 PF00005 ABC transporter DJY80_14895 PF02653 Branched-chain amino acid transport system / permease component DJY80_14900 PF02653 Branched-chain amino acid transport system / permease component DJY80_14905 PF02954 Bacterial regulatory protein, Fis family DJY80_14905 PF13188 PAS domain DJY80_14905 PF00158 Sigma-54 interaction domain DJY80_14910 PF07308 Protein of unknown function (DUF1456) DJY80_14915 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14920 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_14930 PF00005 ABC transporter DJY80_14935 PF04226 Transglycosylase associated protein DJY80_14945 PF01844 HNH endonuclease DJY80_14950 PF01928 CYTH domain DJY80_14955 PF09330 D-lactate dehydrogenase, membrane binding DJY80_14955 PF01565 FAD binding domain DJY80_14960 PF00768 D-alanyl-D-alanine carboxypeptidase DJY80_14970 PF01207 Dihydrouridine synthase (Dus) DJY80_15035 PF00270 DEAD/DEAH box helicase DJY80_15035 PF00271 Helicase conserved C-terminal domain DJY80_15040 PF00440 Bacterial regulatory proteins, tetR family DJY80_15040 PF09209 Tetracyclin repressor-like, C-terminal domain DJY80_15045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_15050 PF00005 ABC transporter DJY80_15075 PF03466 LysR substrate binding domain DJY80_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_15080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJY80_15085 PF00072 Response regulator receiver domain DJY80_15085 PF02954 Bacterial regulatory protein, Fis family DJY80_15085 PF00158 Sigma-54 interaction domain DJY80_15090 PF00512 His Kinase A (phospho-acceptor) domain DJY80_15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_15095 PF13801 Heavy-metal resistance DJY80_15105 PF01797 Transposase IS200 like DJY80_15115 PF01048 Phosphorylase superfamily DJY80_15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_15125 PF03466 LysR substrate binding domain DJY80_15130 PF02028 BCCT, betaine/carnitine/choline family transporter DJY80_15135 PF13977 BetI-type transcriptional repressor, C-terminal DJY80_15135 PF00440 Bacterial regulatory proteins, tetR family DJY80_15140 PF00171 Aldehyde dehydrogenase family DJY80_15145 PF00732 GMC oxidoreductase DJY80_15145 PF05199 GMC oxidoreductase DJY80_15150 PF01797 Transposase IS200 like DJY80_15155 PF01027 Inhibitor of apoptosis-promoting Bax1 DJY80_15160 PF02391 MoaE protein DJY80_15165 PF02597 ThiS family DJY80_15170 PF01967 MoaC family DJY80_15175 PF04055 Radical SAM superfamily DJY80_15175 PF06463 Molybdenum Cofactor Synthesis C DJY80_15180 PF01933 Uncharacterised protein family UPF0052 DJY80_15185 PF09905 DNA-binding protein VF530 DJY80_15190 PF17757 UvrB interaction domain DJY80_15190 PF02151 UvrB/uvrC motif DJY80_15190 PF04851 Type III restriction enzyme, res subunit DJY80_15190 PF00271 Helicase conserved C-terminal domain DJY80_15190 PF12344 Ultra-violet resistance protein B DJY80_15205 PF08241 Methyltransferase domain DJY80_15210 PF00155 Aminotransferase class I and II DJY80_15215 PF06968 Biotin and Thiamin Synthesis associated domain DJY80_15215 PF04055 Radical SAM superfamily DJY80_15220 PF00202 Aminotransferase class-III DJY80_15225 PF10282 Lactonase, 7-bladed beta-propeller DJY80_15235 PF03459 TOBE domain DJY80_15235 PF00005 ABC transporter DJY80_15240 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_15250 PF10766 Multidrug efflux pump-associated protein AcrZ DJY80_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_15255 PF03459 TOBE domain DJY80_15265 PF00005 ABC transporter DJY80_15275 PF16363 GDP-mannose 4,6 dehydratase DJY80_15280 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DJY80_15280 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DJY80_15285 PF10509 Galactokinase galactose-binding signature DJY80_15285 PF08544 GHMP kinases C terminal DJY80_15285 PF00288 GHMP kinases N terminal domain DJY80_15295 PF01263 Aldose 1-epimerase DJY80_15305 PF00300 Histidine phosphatase superfamily (branch 1) DJY80_15310 PF00793 DAHP synthetase I family DJY80_15315 PF01545 Cation efflux family DJY80_15320 PF04973 Nicotinamide mononucleotide transporter DJY80_15325 PF02445 Quinolinate synthetase A protein DJY80_15345 PF13174 Tetratricopeptide repeat DJY80_15345 PF16331 TolA binding protein trimerisation DJY80_15350 PF00691 OmpA family DJY80_15355 PF07676 WD40-like Beta Propeller Repeat DJY80_15355 PF04052 TolB amino-terminal domain DJY80_15360 PF06519 TolA C-terminal DJY80_15360 PF06519 TolA C-terminal DJY80_15365 PF02472 Biopolymer transport protein ExbD/TolR DJY80_15370 PF01618 MotA/TolQ/ExbB proton channel family DJY80_15375 PF03061 Thioesterase superfamily DJY80_15380 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DJY80_15385 PF08173 Membrane bound YbgT-like protein DJY80_15390 PF02322 Cytochrome bd terminal oxidase subunit II DJY80_15395 PF01654 Cytochrome bd terminal oxidase subunit I DJY80_15400 PF00549 CoA-ligase DJY80_15400 PF02629 CoA binding domain DJY80_15405 PF00549 CoA-ligase DJY80_15405 PF08442 ATP-grasp domain DJY80_15410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJY80_15410 PF00364 Biotin-requiring enzyme DJY80_15410 PF02817 e3 binding domain DJY80_15415 PF16078 2-oxoglutarate dehydrogenase N-terminus DJY80_15415 PF16870 2-oxoglutarate dehydrogenase C-terminal DJY80_15415 PF00676 Dehydrogenase E1 component DJY80_15415 PF02779 Transketolase, pyrimidine binding domain DJY80_15420 PF13085 2Fe-2S iron-sulfur cluster binding domain DJY80_15425 PF02910 Fumarate reductase flavoprotein C-term DJY80_15425 PF00890 FAD binding domain DJY80_15430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJY80_15435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJY80_15440 PF00285 Citrate synthase, C-terminal domain DJY80_15445 PF01025 GrpE DJY80_15450 PF01513 ATP-NAD kinase DJY80_15455 PF02463 RecF/RecN/SMC N terminal domain DJY80_15460 PF04355 SmpA / OmlA family DJY80_15465 PF03658 RnfH family Ubiquitin DJY80_15470 PF03364 Polyketide cyclase / dehydrase and lipid transport DJY80_15475 PF01668 SmpB protein DJY80_15485 PF01797 Transposase IS200 like DJY80_15495 PF13356 Arm DNA-binding domain DJY80_15495 PF00589 Phage integrase family DJY80_15555 PF05973 Phage derived protein Gp49-like (DUF891) DJY80_15565 PF00665 Integrase core domain DJY80_15565 PF02796 Helix-turn-helix domain of resolvase DJY80_15570 PF01695 IstB-like ATP binding protein DJY80_15580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJY80_15590 PF00929 Exonuclease DJY80_15595 PF00075 RNase H DJY80_15600 PF08241 Methyltransferase domain DJY80_15605 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJY80_15605 PF00753 Metallo-beta-lactamase superfamily DJY80_15610 PF01464 Transglycosylase SLT domain DJY80_15610 PF01476 LysM domain DJY80_15615 PF03372 Endonuclease/Exonuclease/phosphatase family DJY80_15625 PF00248 Aldo/keto reductase family DJY80_15665 PF09383 NIL domain DJY80_15665 PF00005 ABC transporter DJY80_15670 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_15675 PF03180 NLPA lipoprotein DJY80_15680 PF16358 RcsF lipoprotein DJY80_15685 PF01980 tRNA-methyltransferase O DJY80_15685 PF18389 TrmO C-terminal domain DJY80_15690 PF04073 Aminoacyl-tRNA editing domain DJY80_15690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJY80_15690 PF03129 Anticodon binding domain DJY80_15695 PF04170 NlpE N-terminal domain DJY80_15695 PF17185 NlpE C-terminal OB domain DJY80_15700 PF00472 RF-1 domain DJY80_15705 PF07152 YaeQ protein DJY80_15710 PF06786 Uncharacterised protein family (UPF0253) DJY80_15715 PF07073 Modulator of Rho-dependent transcription termination (ROF) DJY80_15720 PF00034 Cytochrome c DJY80_15725 PF01171 PP-loop family DJY80_15725 PF11734 TilS substrate C-terminal domain DJY80_15725 PF09179 TilS substrate binding domain DJY80_15730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJY80_15735 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DJY80_15740 PF02811 PHP domain DJY80_15740 PF01336 OB-fold nucleic acid binding domain DJY80_15740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJY80_15740 PF14579 Helix-hairpin-helix motif DJY80_15740 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJY80_15745 PF01351 Ribonuclease HII DJY80_15750 PF02684 Lipid-A-disaccharide synthetase DJY80_15755 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DJY80_15755 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_15760 PF07977 FabA-like domain DJY80_15765 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DJY80_15765 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_15770 PF03938 Outer membrane protein (OmpH-like) DJY80_15775 PF01103 Surface antigen DJY80_15775 PF07244 Surface antigen variable number repeat DJY80_15780 PF02163 Peptidase family M50 DJY80_15780 PF17820 PDZ domain DJY80_15790 PF01255 Putative undecaprenyl diphosphate synthase DJY80_15795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJY80_15795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJY80_15795 PF13288 DXP reductoisomerase C-terminal domain DJY80_15805 PF01765 Ribosome recycling factor DJY80_15810 PF00696 Amino acid kinase family DJY80_15815 PF00889 Elongation factor TS DJY80_15820 PF00318 Ribosomal protein S2 DJY80_15825 PF00557 Metallopeptidase family M24 DJY80_15830 PF01966 HD domain DJY80_15830 PF08335 GlnD PII-uridylyltransferase DJY80_15830 PF01842 ACT domain DJY80_15830 PF01909 Nucleotidyltransferase domain DJY80_15835 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_15835 PF14602 Hexapeptide repeat of succinyl-transferase DJY80_15835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DJY80_15840 PF11944 Protein of unknown function (DUF3461) DJY80_15845 PF00258 Flavodoxin DJY80_15850 PF00849 RNA pseudouridylate synthase DJY80_15855 PF04287 tRNA pseudouridine synthase C DJY80_15860 PF01797 Transposase IS200 like DJY80_15865 PF07348 Syd protein (SUKH-2) DJY80_15870 PF14489 QueF-like protein DJY80_15870 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DJY80_15875 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DJY80_15875 PF11892 Domain of unknown function (DUF3412) DJY80_15875 PF03641 Possible lysine decarboxylase DJY80_15885 PF01367 5'-3' exonuclease, C-terminal SAM fold DJY80_15885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJY80_15890 PF18125 RlmM ferredoxin-like domain DJY80_15890 PF01728 FtsJ-like methyltransferase DJY80_15895 PF04241 Protein of unknown function (DUF423) DJY80_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_15900 PF03466 LysR substrate binding domain DJY80_15910 PF00266 Aminotransferase class-V DJY80_15915 PF02657 Fe-S metabolism associated domain DJY80_15920 PF00899 ThiF family DJY80_15925 PF03562 MltA specific insert domain DJY80_15925 PF06725 3D domain DJY80_15940 PF01520 N-acetylmuramoyl-L-alanine amidase DJY80_15940 PF11741 AMIN domain DJY80_15945 PF00696 Amino acid kinase family DJY80_15945 PF00583 Acetyltransferase (GNAT) family DJY80_15950 PF13538 UvrD-like helicase C-terminal domain DJY80_15955 PF00580 UvrD/REP helicase N-terminal domain DJY80_15955 PF12705 PD-(D/E)XK nuclease superfamily DJY80_15955 PF13361 UvrD-like helicase C-terminal domain DJY80_15965 PF00665 Integrase core domain DJY80_15965 PF02796 Helix-turn-helix domain of resolvase DJY80_15970 PF01695 IstB-like ATP binding protein DJY80_15980 PF17946 RecC C-terminal domain DJY80_16010 PF00303 Thymidylate synthase DJY80_16015 PF01790 Prolipoprotein diacylglyceryl transferase DJY80_16020 PF01590 GAF domain DJY80_16020 PF05524 PEP-utilising enzyme, N-terminal DJY80_16020 PF00391 PEP-utilising enzyme, mobile domain DJY80_16020 PF02896 PEP-utilising enzyme, TIM barrel domain DJY80_16025 PF00293 NUDIX domain DJY80_16040 PF02976 DNA mismatch repair enzyme MutH DJY80_16045 PF00248 Aldo/keto reductase family DJY80_16060 PF07690 Major Facilitator Superfamily DJY80_16065 PF13193 AMP-binding enzyme C-terminal domain DJY80_16065 PF01553 Acyltransferase DJY80_16065 PF00501 AMP-binding enzyme DJY80_16070 PF00384 Molybdopterin oxidoreductase DJY80_16070 PF01568 Molydopterin dinucleotide binding domain DJY80_16075 PF00356 Bacterial regulatory proteins, lacI family DJY80_16080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJY80_16080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJY80_16085 PF03466 LysR substrate binding domain DJY80_16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_16090 PF07690 Major Facilitator Superfamily DJY80_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_16095 PF03466 LysR substrate binding domain DJY80_16110 PF02203 Tar ligand binding domain homologue DJY80_16110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJY80_16110 PF00672 HAMP domain DJY80_16130 PF06750 Bacterial Peptidase A24 N-terminal domain DJY80_16130 PF01478 Type IV leader peptidase family DJY80_16155 PF02501 Type II secretion system (T2SS), protein I DJY80_16155 PF07963 Prokaryotic N-terminal methylation motif DJY80_16165 PF07963 Prokaryotic N-terminal methylation motif DJY80_16165 PF08334 Type II secretion system (T2SS), protein G DJY80_16170 PF00482 Type II secretion system (T2SS), protein F DJY80_16185 PF00263 Bacterial type II and III secretion system protein DJY80_16185 PF03958 Bacterial type II/III secretion system short domain DJY80_16205 PF00484 Carbonic anhydrase DJY80_16230 PF09092 Lyase, N terminal DJY80_16230 PF09093 Lyase, catalytic DJY80_16230 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DJY80_16230 PF02278 Polysaccharide lyase family 8, super-sandwich domain DJY80_16235 PF01695 IstB-like ATP binding protein DJY80_16240 PF02796 Helix-turn-helix domain of resolvase DJY80_16240 PF00665 Integrase core domain DJY80_16245 PF01797 Transposase IS200 like DJY80_16250 PF00884 Sulfatase DJY80_16255 PF08220 DeoR-like helix-turn-helix domain DJY80_16255 PF00455 DeoR C terminal sensor domain DJY80_16260 PF08013 Tagatose 6 phosphate kinase DJY80_16265 PF01380 SIS domain DJY80_16270 PF03830 PTS system sorbose subfamily IIB component DJY80_16275 PF03609 PTS system sorbose-specific iic component DJY80_16280 PF03613 PTS system mannose/fructose/sorbose family IID component DJY80_16285 PF03610 PTS system fructose IIA component DJY80_16290 PF01979 Amidohydrolase family DJY80_16305 PF13186 Iron-sulfur cluster-binding domain DJY80_16305 PF04055 Radical SAM superfamily DJY80_16310 PF00884 Sulfatase DJY80_16320 PF01116 Fructose-bisphosphate aldolase class-II DJY80_16335 PF00356 Bacterial regulatory proteins, lacI family DJY80_16340 PF07690 Major Facilitator Superfamily DJY80_16345 PF01055 Glycosyl hydrolases family 31 DJY80_16345 PF13802 Galactose mutarotase-like DJY80_16345 PF17137 Domain of unknown function (DUF5110) DJY80_16345 PF16338 Domain of unknown function (DUF4968) DJY80_16350 PF00356 Bacterial regulatory proteins, lacI family DJY80_16355 PF02264 LamB porin DJY80_16360 PF00367 phosphotransferase system, EIIB DJY80_16360 PF02378 Phosphotransferase system, EIIC DJY80_16365 PF08532 Beta-galactosidase trimerisation domain DJY80_16365 PF08533 Beta-galactosidase C-terminal domain DJY80_16365 PF02449 Beta-galactosidase DJY80_16370 PF07745 Glycosyl hydrolase family 53 DJY80_16375 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_16380 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_16385 PF13416 Bacterial extracellular solute-binding protein DJY80_16390 PF00005 ABC transporter DJY80_16390 PF17912 MalK OB fold domain DJY80_16395 PF00005 ABC transporter DJY80_16400 PF02653 Branched-chain amino acid transport system / permease component DJY80_16405 PF13407 Periplasmic binding protein domain DJY80_16415 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DJY80_16420 PF03551 Transcriptional regulator PadR-like family DJY80_16510 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DJY80_16515 PF15723 Motility quorum-sensing regulator, toxin of MqsA DJY80_16535 PF13356 Arm DNA-binding domain DJY80_16535 PF00589 Phage integrase family DJY80_16535 PF14659 Phage integrase, N-terminal SAM-like domain DJY80_16545 PF01336 OB-fold nucleic acid binding domain DJY80_16545 PF00152 tRNA synthetases class II (D, K and N) DJY80_16555 PF17768 RecJ OB domain DJY80_16555 PF02272 DHHA1 domain DJY80_16555 PF01368 DHH family DJY80_16560 PF10411 Disulfide bond isomerase protein N-terminus DJY80_16560 PF13098 Thioredoxin-like domain DJY80_16565 PF00589 Phage integrase family DJY80_16565 PF02899 Phage integrase, N-terminal SAM-like domain DJY80_16570 PF00258 Flavodoxin DJY80_16575 PF06123 Inner membrane protein CreD DJY80_16580 PF00512 His Kinase A (phospho-acceptor) domain DJY80_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_16580 PF00672 HAMP domain DJY80_16585 PF00072 Response regulator receiver domain DJY80_16585 PF00486 Transcriptional regulatory protein, C terminal DJY80_16590 PF07254 Membrane-bound toxin component of toxin-antitoxin system DJY80_16595 PF03937 Flavinator of succinate dehydrogenase DJY80_16600 PF01571 Aminomethyltransferase folate-binding domain DJY80_16610 PF03006 Haemolysin-III related DJY80_16635 PF02347 Glycine cleavage system P-protein DJY80_16640 PF01597 Glycine cleavage H-protein DJY80_16645 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJY80_16645 PF01571 Aminomethyltransferase folate-binding domain DJY80_16655 PF01494 FAD binding domain DJY80_16660 PF01494 FAD binding domain DJY80_16665 PF05195 Aminopeptidase P, N-terminal domain DJY80_16665 PF00557 Metallopeptidase family M24 DJY80_16670 PF03695 Uncharacterised protein family (UPF0149) DJY80_16675 PF05164 Cell division protein ZapA DJY80_16685 PF01812 5-formyltetrahydrofolate cyclo-ligase family DJY80_16690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJY80_16690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJY80_16690 PF01842 ACT domain DJY80_16695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DJY80_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_16700 PF03466 LysR substrate binding domain DJY80_16705 PF04402 Protein of unknown function (DUF541) DJY80_16710 PF01810 LysE type translocator DJY80_16715 PF00924 Mechanosensitive ion channel DJY80_16715 PF05552 Conserved TM helix DJY80_16725 PF01116 Fructose-bisphosphate aldolase class-II DJY80_16730 PF00162 Phosphoglycerate kinase DJY80_16735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJY80_16735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJY80_16745 PF02796 Helix-turn-helix domain of resolvase DJY80_16745 PF00665 Integrase core domain DJY80_16750 PF01695 IstB-like ATP binding protein DJY80_16760 PF00456 Transketolase, thiamine diphosphate binding domain DJY80_16760 PF02780 Transketolase, C-terminal domain DJY80_16760 PF02779 Transketolase, pyrimidine binding domain DJY80_16765 PF01435 Peptidase family M48 DJY80_16775 PF00355 Rieske [2Fe-2S] domain DJY80_16780 PF17944 Arginine decarboxylase C-terminal helical extension DJY80_16780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJY80_16780 PF17810 Arginine decarboxylase helical bundle domain DJY80_16785 PF02772 S-adenosylmethionine synthetase, central domain DJY80_16785 PF02773 S-adenosylmethionine synthetase, C-terminal domain DJY80_16785 PF00438 S-adenosylmethionine synthetase, N-terminal domain DJY80_16790 PF10263 SprT-like family DJY80_16790 PF17283 SprT-like zinc ribbon domain DJY80_16795 PF04231 Endonuclease I DJY80_16800 PF04452 RNA methyltransferase DJY80_16805 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DJY80_16805 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DJY80_16810 PF02622 Uncharacterized ACR, COG1678 DJY80_16815 PF03652 Holliday junction resolvase DJY80_16820 PF00795 Carbon-nitrogen hydrolase DJY80_16825 PF04371 Porphyromonas-type peptidyl-arginine deiminase DJY80_16830 PF00437 Type II/IV secretion system protein DJY80_16835 PF01168 Alanine racemase, N-terminal domain DJY80_16840 PF03807 NADP oxidoreductase coenzyme F420-dependent DJY80_16840 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJY80_16850 PF02325 YGGT family DJY80_16855 PF02594 Uncharacterised ACR, YggU family COG1872 DJY80_16860 PF01725 Ham1 family DJY80_16865 PF06969 HemN C-terminal domain DJY80_16865 PF04055 Radical SAM superfamily DJY80_16870 PF11713 Peptidase C80 family DJY80_16870 PF16671 Actin cross-linking domain DJY80_16870 PF11647 Membrane Localization Domain DJY80_16870 PF12146 Serine aminopeptidase, S33 DJY80_16870 PF07634 RtxA repeat DJY80_16880 PF04960 Glutaminase DJY80_16885 PF04320 Protein with unknown function (DUF469) DJY80_16890 PF02390 Putative methyltransferase DJY80_16895 PF14815 NUDIX domain DJY80_16895 PF10576 Iron-sulfur binding domain of endonuclease III DJY80_16895 PF00633 Helix-hairpin-helix motif DJY80_16895 PF00730 HhH-GPD superfamily base excision DNA repair protein DJY80_16900 PF04362 Bacterial Fe(2+) trafficking DJY80_16905 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DJY80_16905 PF01464 Transglycosylase SLT domain DJY80_16915 PF07715 TonB-dependent Receptor Plug Domain DJY80_16920 PF02653 Branched-chain amino acid transport system / permease component DJY80_16925 PF00005 ABC transporter DJY80_16930 PF13407 Periplasmic binding protein domain DJY80_16935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJY80_16935 PF01276 Orn/Lys/Arg decarboxylase, major domain DJY80_16935 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DJY80_17010 PF17871 AAA lid domain DJY80_17010 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_17010 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_17010 PF07724 AAA domain (Cdc48 subfamily) DJY80_17020 PF05736 OprF membrane domain DJY80_17020 PF00691 OmpA family DJY80_17060 PF02517 CPBP intramembrane metalloprotease DJY80_17065 PF00765 Autoinducer synthase DJY80_17070 PF00196 Bacterial regulatory proteins, luxR family DJY80_17070 PF03472 Autoinducer binding domain DJY80_17105 PF06276 Ferric iron reductase FhuF-like transporter DJY80_17105 PF04183 IucA / IucC family DJY80_17110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DJY80_17115 PF00593 TonB dependent receptor DJY80_17115 PF07715 TonB-dependent Receptor Plug Domain DJY80_17140 PF00529 HlyD membrane-fusion protein of T1SS DJY80_17140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_17145 PF00873 AcrB/AcrD/AcrF family DJY80_17150 PF07906 ShET2 enterotoxin, N-terminal region DJY80_17160 PF03797 Autotransporter beta-domain DJY80_17165 PF14496 C-terminal novel E3 ligase, LRR-interacting DJY80_17165 PF12468 Type III secretion system leucine rich repeat protein DJY80_17175 PF12468 Type III secretion system leucine rich repeat protein DJY80_17175 PF12468 Type III secretion system leucine rich repeat protein DJY80_17175 PF14496 C-terminal novel E3 ligase, LRR-interacting DJY80_17175 PF14496 C-terminal novel E3 ligase, LRR-interacting DJY80_17180 PF12468 Type III secretion system leucine rich repeat protein DJY80_17180 PF14496 C-terminal novel E3 ligase, LRR-interacting DJY80_17195 PF03806 AbgT putative transporter family DJY80_17200 PF07687 Peptidase dimerisation domain DJY80_17200 PF01546 Peptidase family M20/M25/M40 DJY80_17205 PF00593 TonB dependent receptor DJY80_17205 PF07715 TonB-dependent Receptor Plug Domain DJY80_17215 PF02796 Helix-turn-helix domain of resolvase DJY80_17215 PF00665 Integrase core domain DJY80_17220 PF01695 IstB-like ATP binding protein DJY80_17225 PF00550 Phosphopantetheine attachment site DJY80_17225 PF08242 Methyltransferase domain DJY80_17225 PF00668 Condensation domain DJY80_17225 PF00501 AMP-binding enzyme DJY80_17230 PF00501 AMP-binding enzyme DJY80_17230 PF13193 AMP-binding enzyme C-terminal domain DJY80_17230 PF00668 Condensation domain DJY80_17250 PF00975 Thioesterase domain DJY80_17260 PF00664 ABC transporter transmembrane region DJY80_17260 PF00005 ABC transporter DJY80_17260 PF08021 Siderophore-interacting FAD-binding domain DJY80_17260 PF04954 Siderophore-interacting protein DJY80_17265 PF00005 ABC transporter DJY80_17265 PF00664 ABC transporter transmembrane region DJY80_17280 PF02447 GntP family permease DJY80_17290 PF12951 Passenger-associated-transport-repeat DJY80_17295 PF04717 Type VI secretion system, phage-baseplate injector DJY80_17305 PF05593 RHS Repeat DJY80_17305 PF03527 RHS protein DJY80_17325 PF00939 Sodium:sulfate symporter transmembrane region DJY80_17330 PF00356 Bacterial regulatory proteins, lacI family DJY80_17345 PF00700 Bacterial flagellin C-terminal helical region DJY80_17345 PF00669 Bacterial flagellin N-terminal helical region DJY80_17350 PF00486 Transcriptional regulatory protein, C terminal DJY80_17350 PF18500 CadC C-terminal domain 1 DJY80_17370 PF00460 Flagella basal body rod protein DJY80_17370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_17380 PF02119 Flagellar P-ring protein DJY80_17385 PF02107 Flagellar L-ring protein DJY80_17390 PF00460 Flagella basal body rod protein DJY80_17390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_17395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_17395 PF00460 Flagella basal body rod protein DJY80_17400 PF07559 Flagellar basal body protein FlaE DJY80_17400 PF00460 Flagella basal body rod protein DJY80_17400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_17405 PF03963 Flagellar hook capping protein - N-terminal region DJY80_17405 PF13860 FlgD Ig-like domain DJY80_17405 PF13861 FlgD Tudor-like domain DJY80_17410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJY80_17410 PF00460 Flagella basal body rod protein DJY80_17415 PF00460 Flagella basal body rod protein DJY80_17420 PF13144 Chaperone for flagella basal body P-ring formation DJY80_17440 PF18269 T3SS EscN ATPase C-terminal domain DJY80_17440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_17455 PF08345 Flagellar M-ring protein C-terminal DJY80_17455 PF01514 Secretory protein of YscJ/FliF family DJY80_17460 PF02049 Flagellar hook-basal body complex protein FliE DJY80_17465 PF00072 Response regulator receiver domain DJY80_17465 PF02954 Bacterial regulatory protein, Fis family DJY80_17465 PF00158 Sigma-54 interaction domain DJY80_17475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJY80_17480 PF00813 FliP family DJY80_17485 PF01313 Bacterial export proteins, family 3 DJY80_17490 PF01311 Bacterial export proteins, family 1 DJY80_17495 PF01312 FlhB HrpN YscU SpaS Family DJY80_17515 PF01497 Periplasmic binding protein DJY80_17520 PF00419 Fimbrial protein DJY80_17520 PF09222 Fimbrial adhesin F17-AG, lectin domain DJY80_17525 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_17525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_17530 PF13953 PapC C-terminal domain DJY80_17530 PF13954 PapC N-terminal domain DJY80_17530 PF00577 Outer membrane usher protein DJY80_17535 PF01797 Transposase IS200 like DJY80_17550 PF00263 Bacterial type II and III secretion system protein DJY80_17550 PF04972 BON domain DJY80_17550 PF13629 Pilus formation protein N terminal region DJY80_17555 PF00263 Bacterial type II and III secretion system protein DJY80_17555 PF13629 Pilus formation protein N terminal region DJY80_17555 PF04972 BON domain DJY80_17570 PF00437 Type II/IV secretion system protein DJY80_17610 PF02472 Biopolymer transport protein ExbD/TolR DJY80_17615 PF01618 MotA/TolQ/ExbB proton channel family DJY80_17620 PF01053 Cys/Met metabolism PLP-dependent enzyme DJY80_17625 PF09335 SNARE associated Golgi protein DJY80_17630 PF06719 AraC-type transcriptional regulator N-terminus DJY80_17630 PF12833 Helix-turn-helix domain DJY80_17635 PF00465 Iron-containing alcohol dehydrogenase DJY80_17645 PF00248 Aldo/keto reductase family DJY80_17660 PF07732 Multicopper oxidase DJY80_17660 PF07731 Multicopper oxidase DJY80_17670 PF01553 Acyltransferase DJY80_17675 PF00521 DNA gyrase/topoisomerase IV, subunit A DJY80_17675 PF03989 DNA gyrase C-terminal domain, beta-propeller DJY80_17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_17690 PF03466 LysR substrate binding domain DJY80_17695 PF01751 Toprim domain DJY80_17695 PF00204 DNA gyrase B DJY80_17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_17695 PF00986 DNA gyrase B subunit, carboxyl terminus DJY80_17700 PF05728 Uncharacterised protein family (UPF0227) DJY80_17705 PF00149 Calcineurin-like phosphoesterase DJY80_17710 PF06853 Protein of unknown function (DUF1249) DJY80_17715 PF00293 NUDIX domain DJY80_17720 PF02321 Outer membrane efflux protein DJY80_17730 PF06693 Protein of unknown function (DUF1190) DJY80_17735 PF03738 Glutathionylspermidine synthase preATP-grasp DJY80_17740 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJY80_17745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DJY80_17750 PF04380 Membrane fusogenic activity DJY80_17760 PF13520 Amino acid permease DJY80_17765 PF01467 Cytidylyltransferase-like DJY80_17765 PF00294 pfkB family carbohydrate kinase DJY80_17770 PF08335 GlnD PII-uridylyltransferase DJY80_17770 PF03710 Glutamate-ammonia ligase adenylyltransferase DJY80_17775 PF01928 CYTH domain DJY80_17780 PF08239 Bacterial SH3 domain DJY80_17785 PF01966 HD domain DJY80_17785 PF12627 Probable RNA and SrmB- binding site of polymerase A DJY80_17785 PF01743 Poly A polymerase head domain DJY80_17790 PF02673 Bacitracin resistance protein BacA DJY80_17795 PF02152 Dihydroneopterin aldolase DJY80_17800 PF02660 Glycerol-3-phosphate acyltransferase DJY80_17810 PF00814 Glycoprotease family DJY80_17815 PF01165 Ribosomal protein S21 DJY80_17820 PF08278 DNA primase DnaG DnaB-binding DJY80_17820 PF10410 DnaB-helicase binding domain of primase DJY80_17820 PF01807 CHC2 zinc finger DJY80_17820 PF08275 DNA primase catalytic core, N-terminal domain DJY80_17825 PF04542 Sigma-70 region 2 DJY80_17825 PF04546 Sigma-70, non-essential region DJY80_17825 PF04539 Sigma-70 region 3 DJY80_17825 PF04545 Sigma-70, region 4 DJY80_17825 PF00140 Sigma-70 factor, region 1.2 DJY80_17825 PF03979 Sigma-70 factor, region 1.1 DJY80_17835 PF02796 Helix-turn-helix domain of resolvase DJY80_17835 PF00665 Integrase core domain DJY80_17840 PF01695 IstB-like ATP binding protein DJY80_17885 PF03466 LysR substrate binding domain DJY80_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_17905 PF01042 Endoribonuclease L-PSP DJY80_17945 PF00529 HlyD membrane-fusion protein of T1SS DJY80_17945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_17950 PF04632 Fusaric acid resistance protein family DJY80_17960 PF14310 Fibronectin type III-like domain DJY80_17960 PF00933 Glycosyl hydrolase family 3 N terminal domain DJY80_17960 PF01915 Glycosyl hydrolase family 3 C-terminal domain DJY80_17970 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_17975 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_17980 PF13416 Bacterial extracellular solute-binding protein DJY80_17985 PF00356 Bacterial regulatory proteins, lacI family DJY80_17990 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DJY80_17995 PF17912 MalK OB fold domain DJY80_17995 PF03459 TOBE domain DJY80_17995 PF00005 ABC transporter DJY80_18015 PF04829 Pre-toxin domain with VENN motif DJY80_18015 PF13018 Extended Signal Peptide of Type V secretion system DJY80_18015 PF05860 haemagglutination activity domain DJY80_18015 PF13332 Hemagglutinin repeat DJY80_18020 PF13332 Hemagglutinin repeat DJY80_18020 PF05860 haemagglutination activity domain DJY80_18020 PF04829 Pre-toxin domain with VENN motif DJY80_18020 PF13018 Extended Signal Peptide of Type V secretion system DJY80_18045 PF13332 Hemagglutinin repeat DJY80_18045 PF04829 Pre-toxin domain with VENN motif DJY80_18045 PF05860 haemagglutination activity domain DJY80_18045 PF13018 Extended Signal Peptide of Type V secretion system DJY80_18050 PF08479 POTRA domain, ShlB-type DJY80_18050 PF17287 POTRA domain DJY80_18050 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJY80_18055 PF00092 von Willebrand factor type A domain DJY80_18060 PF02342 TerD domain DJY80_18070 PF00092 von Willebrand factor type A domain DJY80_18090 PF03729 Short repeat of unknown function (DUF308) DJY80_18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_18095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJY80_18100 PF05175 Methyltransferase small domain DJY80_18105 PF03797 Autotransporter beta-domain DJY80_18110 PF01863 Protein of unknown function DUF45 DJY80_18115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJY80_18120 PF00375 Sodium:dicarboxylate symporter family DJY80_18125 PF01797 Transposase IS200 like DJY80_18130 PF10688 Bacterial inner membrane protein DJY80_18135 PF08666 SAF domain DJY80_18135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DJY80_18140 PF08125 Mannitol dehydrogenase C-terminal domain DJY80_18140 PF01232 Mannitol dehydrogenase Rossmann domain DJY80_18145 PF02614 Glucuronate isomerase DJY80_18150 PF07690 Major Facilitator Superfamily DJY80_18155 PF00392 Bacterial regulatory proteins, gntR family DJY80_18155 PF07729 FCD domain DJY80_18165 PF09335 SNARE associated Golgi protein DJY80_18170 PF13721 SecD export protein N-terminal TM region DJY80_18185 PF05957 Bacterial protein of unknown function (DUF883) DJY80_18190 PF07332 Putative Actinobacterial Holin-X, holin superfamily III DJY80_18200 PF07681 DoxX DJY80_18210 PF00665 Integrase core domain DJY80_18210 PF02796 Helix-turn-helix domain of resolvase DJY80_18215 PF01695 IstB-like ATP binding protein DJY80_18220 PF00293 NUDIX domain DJY80_18230 PF01043 SecA preprotein cross-linking domain DJY80_18230 PF07516 SecA Wing and Scaffold domain DJY80_18230 PF07517 SecA DEAD-like domain DJY80_18230 PF02810 SEC-C motif DJY80_18235 PF06558 Secretion monitor precursor protein (SecM) DJY80_18245 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DJY80_18250 PF12327 FtsZ family, C-terminal domain DJY80_18250 PF00091 Tubulin/FtsZ family, GTPase domain DJY80_18255 PF02491 SHS2 domain inserted in FTSA DJY80_18260 PF08478 POTRA domain, FtsQ-type DJY80_18260 PF03799 Cell division protein FtsQ DJY80_18265 PF07478 D-ala D-ala ligase C-terminus DJY80_18265 PF01820 D-ala D-ala ligase N-terminus DJY80_18270 PF02875 Mur ligase family, glutamate ligase domain DJY80_18270 PF01225 Mur ligase family, catalytic domain DJY80_18270 PF08245 Mur ligase middle domain DJY80_18275 PF03033 Glycosyltransferase family 28 N-terminal domain DJY80_18275 PF04101 Glycosyltransferase family 28 C-terminal domain DJY80_18280 PF01098 Cell cycle protein DJY80_18285 PF08245 Mur ligase middle domain DJY80_18285 PF02875 Mur ligase family, glutamate ligase domain DJY80_18290 PF00953 Glycosyl transferase family 4 DJY80_18290 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DJY80_18295 PF01225 Mur ligase family, catalytic domain DJY80_18295 PF02875 Mur ligase family, glutamate ligase domain DJY80_18295 PF08245 Mur ligase middle domain DJY80_18300 PF01225 Mur ligase family, catalytic domain DJY80_18300 PF08245 Mur ligase middle domain DJY80_18300 PF02875 Mur ligase family, glutamate ligase domain DJY80_18305 PF00905 Penicillin binding protein transpeptidase domain DJY80_18305 PF03717 Penicillin-binding Protein dimerisation domain DJY80_18310 PF04999 Cell division protein FtsL DJY80_18315 PF01795 MraW methylase family DJY80_18320 PF02381 MraZ protein, putative antitoxin-like DJY80_18330 PF06610 L-alanine exporter DJY80_18335 PF00356 Bacterial regulatory proteins, lacI family DJY80_18335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_18345 PF01797 Transposase IS200 like DJY80_18350 PF10369 Small subunit of acetolactate synthase DJY80_18355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJY80_18355 PF00205 Thiamine pyrophosphate enzyme, central domain DJY80_18355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJY80_18365 PF00501 AMP-binding enzyme DJY80_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_18375 PF03466 LysR substrate binding domain DJY80_18385 PF01797 Transposase IS200 like DJY80_18390 PF08502 LeuA allosteric (dimerisation) domain DJY80_18390 PF00682 HMGL-like DJY80_18395 PF00180 Isocitrate/isopropylmalate dehydrogenase DJY80_18400 PF00330 Aconitase family (aconitate hydratase) DJY80_18405 PF00694 Aconitase C-terminal domain DJY80_18410 PF07690 Major Facilitator Superfamily DJY80_18415 PF12793 Sugar transport-related sRNA regulator N-term DJY80_18415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_18430 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_18435 PF00005 ABC transporter DJY80_18440 PF09335 SNARE associated Golgi protein DJY80_18445 PF03104 DNA polymerase family B, exonuclease domain DJY80_18445 PF00136 DNA polymerase family B DJY80_18450 PF00176 SNF2 family N-terminal domain DJY80_18450 PF12137 RNA polymerase recycling family C-terminal DJY80_18450 PF00271 Helicase conserved C-terminal domain DJY80_18450 PF18337 RapA N-terminal Tudor like domain DJY80_18450 PF18339 RapA N-terminal Tudor like domain 1 DJY80_18465 PF00691 OmpA family DJY80_18465 PF05736 OprF membrane domain DJY80_18500 PF04717 Type VI secretion system, phage-baseplate injector DJY80_18505 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_18505 PF07724 AAA domain (Cdc48 subfamily) DJY80_18505 PF17871 AAA lid domain DJY80_18505 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_18550 PF00849 RNA pseudouridylate synthase DJY80_18555 PF05099 Tellurite resistance protein TerB DJY80_18555 PF00226 DnaJ domain DJY80_18560 PF03968 OstA-like protein DJY80_18560 PF04453 LPS transport system D DJY80_18565 PF09312 SurA N-terminal domain DJY80_18565 PF00639 PPIC-type PPIASE domain DJY80_18570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DJY80_18575 PF00398 Ribosomal RNA adenine dimethylase DJY80_18580 PF04379 ApaG domain DJY80_18585 PF00149 Calcineurin-like phosphoesterase DJY80_18600 PF01797 Transposase IS200 like DJY80_18605 PF00186 Dihydrofolate reductase DJY80_18610 PF12821 Threonine/Serine exporter, ThrE DJY80_18615 PF06738 Putative threonine/serine exporter DJY80_18620 PF01810 LysE type translocator DJY80_18625 PF02142 MGS-like domain DJY80_18625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJY80_18625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJY80_18630 PF00117 Glutamine amidotransferase class-I DJY80_18630 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DJY80_18635 PF05173 Dihydrodipicolinate reductase, C-terminus DJY80_18635 PF01113 Dihydrodipicolinate reductase, N-terminus DJY80_18640 PF01797 Transposase IS200 like DJY80_18645 PF02401 LytB protein DJY80_18650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJY80_18655 PF01252 Signal peptidase (SPase) II DJY80_18660 PF00133 tRNA synthetases class I (I, L, M and V) DJY80_18660 PF06827 Zinc finger found in FPG and IleRS DJY80_18660 PF08264 Anticodon-binding domain of tRNA DJY80_18665 PF06574 FAD synthetase DJY80_18665 PF01687 Riboflavin kinase DJY80_18680 PF01649 Ribosomal protein S20 DJY80_18685 PF03466 LysR substrate binding domain DJY80_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_18690 PF06965 Na+/H+ antiporter 1 DJY80_18695 PF00226 DnaJ domain DJY80_18695 PF00684 DnaJ central domain DJY80_18695 PF01556 DnaJ C terminal domain DJY80_18700 PF00012 Hsp70 protein DJY80_18705 PF01184 GPR1/FUN34/yaaH family DJY80_18715 PF07690 Major Facilitator Superfamily DJY80_18720 PF00994 Probable molybdopterin binding domain DJY80_18725 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJY80_18735 PF03883 Peroxide stress protein YaaA DJY80_18740 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_18740 PF14821 Threonine synthase N terminus DJY80_18745 PF08544 GHMP kinases C terminal DJY80_18745 PF00288 GHMP kinases N terminal domain DJY80_18750 PF01842 ACT domain DJY80_18750 PF00696 Amino acid kinase family DJY80_18750 PF13840 ACT domain DJY80_18750 PF03447 Homoserine dehydrogenase, NAD binding domain DJY80_18750 PF00742 Homoserine dehydrogenase DJY80_18755 PF08254 Threonine leader peptide DJY80_18760 PF00486 Transcriptional regulatory protein, C terminal DJY80_18760 PF00072 Response regulator receiver domain DJY80_18765 PF05981 CreA protein DJY80_18775 PF06445 GyrI-like small molecule binding domain DJY80_18775 PF12833 Helix-turn-helix domain DJY80_18780 PF00300 Histidine phosphatase superfamily (branch 1) DJY80_18785 PF01931 Protein of unknown function DUF84 DJY80_18790 PF01371 Trp repressor protein DJY80_18795 PF01464 Transglycosylase SLT domain DJY80_18795 PF14718 Soluble lytic murein transglycosylase L domain DJY80_18800 PF00690 Cation transporter/ATPase, N-terminus DJY80_18800 PF00689 Cation transporting ATPase, C-terminus DJY80_18810 PF17152 Periplasmic sensor domain DJY80_18810 PF00990 Diguanylate cyclase, GGDEF domain DJY80_18815 PF00691 OmpA family DJY80_18830 PF13521 AAA domain DJY80_18830 PF01381 Helix-turn-helix DJY80_18835 PF18073 Rubredoxin metal binding domain DJY80_18840 PF18429 Domain of unknown function (DUF5609) DJY80_18845 PF10144 Bacterial virulence factor haemolysin DJY80_18850 PF01048 Phosphorylase superfamily DJY80_18855 PF01676 Metalloenzyme superfamily DJY80_18865 PF01791 DeoC/LacD family aldolase DJY80_18870 PF01773 Na+ dependent nucleoside transporter N-terminus DJY80_18870 PF07670 Nucleoside recognition DJY80_18870 PF07662 Na+ dependent nucleoside transporter C-terminus DJY80_18875 PF01026 TatD related DNase DJY80_18880 PF01734 Patatin-like phospholipase DJY80_18885 PF07043 Protein of unknown function (DUF1328) DJY80_18890 PF04972 BON domain DJY80_18895 PF16658 Class II release factor RF3, C-terminal domain DJY80_18895 PF03144 Elongation factor Tu domain 2 DJY80_18895 PF00009 Elongation factor Tu GTP binding domain DJY80_18900 PF00583 Acetyltransferase (GNAT) family DJY80_18905 PF03603 DNA polymerase III psi subunit DJY80_18910 PF05175 Methyltransferase small domain DJY80_18910 PF08468 Methyltransferase small domain N-terminal DJY80_18920 PF07256 Protein of unknown function (DUF1435) DJY80_18925 PF00990 Diguanylate cyclase, GGDEF domain DJY80_18930 PF01095 Pectinesterase DJY80_18950 PF00873 AcrB/AcrD/AcrF family DJY80_18955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_18970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DJY80_18975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_18975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_18990 PF00005 ABC transporter DJY80_18995 PF02653 Branched-chain amino acid transport system / permease component DJY80_19000 PF02653 Branched-chain amino acid transport system / permease component DJY80_19005 PF13407 Periplasmic binding protein domain DJY80_19010 PF01791 DeoC/LacD family aldolase DJY80_19015 PF03992 Antibiotic biosynthesis monooxygenase DJY80_19020 PF10696 Protein of unknown function (DUF2501) DJY80_19025 PF02896 PEP-utilising enzyme, TIM barrel domain DJY80_19025 PF05524 PEP-utilising enzyme, N-terminal DJY80_19025 PF00391 PEP-utilising enzyme, mobile domain DJY80_19025 PF00381 PTS HPr component phosphorylation site DJY80_19025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJY80_19035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJY80_19040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJY80_19045 PF12833 Helix-turn-helix domain DJY80_19055 PF05987 Bacterial protein of unknown function (DUF898) DJY80_19070 PF00665 Integrase core domain DJY80_19095 PF01555 DNA methylase DJY80_19115 PF12102 Domain of unknown function (DUF3578) DJY80_19115 PF07728 AAA domain (dynein-related subfamily) DJY80_19120 PF02796 Helix-turn-helix domain of resolvase DJY80_19120 PF00665 Integrase core domain DJY80_19125 PF01695 IstB-like ATP binding protein DJY80_19130 PF02580 D-Tyr-tRNA(Tyr) deacylase DJY80_19135 PF03631 Virulence factor BrkB DJY80_19140 PF13419 Haloacid dehalogenase-like hydrolase DJY80_19150 PF03951 Glutamine synthetase, beta-Grasp domain DJY80_19150 PF00120 Glutamine synthetase, catalytic domain DJY80_19155 PF00989 PAS fold DJY80_19155 PF00512 His Kinase A (phospho-acceptor) domain DJY80_19155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_19160 PF00158 Sigma-54 interaction domain DJY80_19160 PF00072 Response regulator receiver domain DJY80_19160 PF02954 Bacterial regulatory protein, Fis family DJY80_19165 PF04055 Radical SAM superfamily DJY80_19165 PF06969 HemN C-terminal domain DJY80_19175 PF04220 Der GTPase activator (YihI) DJY80_19185 PF01926 50S ribosome-binding GTPase DJY80_19190 PF01797 Transposase IS200 like DJY80_19195 PF01797 Transposase IS200 like DJY80_19200 PF00476 DNA polymerase family A DJY80_19200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJY80_19200 PF01367 5'-3' exonuclease, C-terminal SAM fold DJY80_19200 PF01612 3'-5' exonuclease DJY80_19205 PF01323 DSBA-like thioredoxin domain DJY80_19210 PF01636 Phosphotransferase enzyme family DJY80_19215 PF06288 Protein of unknown function (DUF1040) DJY80_19220 PF12804 MobA-like NTP transferase domain DJY80_19225 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DJY80_19230 PF00872 Transposase, Mutator family DJY80_19265 PF01177 Asp/Glu/Hydantoin racemase DJY80_19270 PF00593 TonB dependent receptor DJY80_19270 PF07715 TonB-dependent Receptor Plug Domain DJY80_19275 PF05958 tRNA (Uracil-5-)-methyltransferase DJY80_19280 PF07226 Protein of unknown function (DUF1422) DJY80_19285 PF00440 Bacterial regulatory proteins, tetR family DJY80_19290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_19290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJY80_19295 PF03466 LysR substrate binding domain DJY80_19295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_19300 PF00462 Glutaredoxin DJY80_19300 PF08534 Redoxin DJY80_19305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_19305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJY80_19310 PF03544 Gram-negative bacterial TonB protein C-terminal DJY80_19315 PF00529 HlyD membrane-fusion protein of T1SS DJY80_19320 PF00005 ABC transporter DJY80_19320 PF00664 ABC transporter transmembrane region DJY80_19330 PF00593 TonB dependent receptor DJY80_19330 PF07715 TonB-dependent Receptor Plug Domain DJY80_19335 PF00206 Lyase DJY80_19335 PF14698 Argininosuccinate lyase C-terminal DJY80_19340 PF00696 Amino acid kinase family DJY80_19345 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJY80_19345 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJY80_19350 PF01546 Peptidase family M20/M25/M40 DJY80_19350 PF07687 Peptidase dimerisation domain DJY80_19355 PF00311 Phosphoenolpyruvate carboxylase DJY80_19400 PF01266 FAD dependent oxidoreductase DJY80_19400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DJY80_19405 PF00343 Carbohydrate phosphorylase DJY80_19410 PF00534 Glycosyl transferases group 1 DJY80_19410 PF08323 Starch synthase catalytic domain DJY80_19420 PF00128 Alpha amylase, catalytic domain DJY80_19420 PF18390 Glycogen debranching enzyme C-terminal domain DJY80_19420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJY80_19425 PF00128 Alpha amylase, catalytic domain DJY80_19425 PF02806 Alpha amylase, C-terminal all-beta domain DJY80_19425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJY80_19430 PF07694 5TMR of 5TMR-LYT DJY80_19430 PF06580 Histidine kinase DJY80_19435 PF11924 Inverse autotransporter, beta-domain DJY80_19435 PF02369 Bacterial Ig-like domain (group 1) DJY80_19435 PF07979 Intimin C-type lectin domain DJY80_19435 PF09134 Invasin, domain 3 DJY80_19460 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJY80_19460 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJY80_19465 PF01914 MarC family integral membrane protein DJY80_19485 PF01202 Shikimate kinase DJY80_19490 PF02447 GntP family permease DJY80_19495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJY80_19495 PF00356 Bacterial regulatory proteins, lacI family DJY80_19500 PF02678 Pirin DJY80_19500 PF17954 Quercetinase C-terminal cupin domain DJY80_19515 PF00486 Transcriptional regulatory protein, C terminal DJY80_19515 PF00072 Response regulator receiver domain DJY80_19525 PF01116 Fructose-bisphosphate aldolase class-II DJY80_19535 PF13407 Periplasmic binding protein domain DJY80_19540 PF02653 Branched-chain amino acid transport system / permease component DJY80_19545 PF00005 ABC transporter DJY80_19550 PF00072 Response regulator receiver domain DJY80_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_19550 PF00512 His Kinase A (phospho-acceptor) domain DJY80_19550 PF08448 PAS fold DJY80_19550 PF13188 PAS domain DJY80_19560 PF01384 Phosphate transporter family DJY80_19565 PF01797 Transposase IS200 like DJY80_19570 PF10625 Universal stress protein B (UspB) DJY80_19575 PF00582 Universal stress protein family DJY80_19580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJY80_19580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJY80_19585 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DJY80_19585 PF00413 Matrixin DJY80_19585 PF08548 Peptidase M10 serralysin C terminal DJY80_19590 PF04445 Putative SAM-dependent methyltransferase DJY80_19595 PF01432 Peptidase family M3 DJY80_19600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DJY80_19605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJY80_19605 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_19610 PF17853 GGDEF-like domain DJY80_19610 PF05651 Putative sugar diacid recognition DJY80_19610 PF13556 PucR C-terminal helix-turn-helix domain DJY80_19620 PF02447 GntP family permease DJY80_19625 PF02595 Glycerate kinase family DJY80_19650 PF03631 Virulence factor BrkB DJY80_19655 PF02611 CDP-diacylglycerol pyrophosphatase DJY80_19660 PF05170 AsmA family DJY80_19665 PF00563 EAL domain DJY80_19670 PF01361 Tautomerase enzyme DJY80_19675 PF00294 pfkB family carbohydrate kinase DJY80_19680 PF05193 Peptidase M16 inactive domain DJY80_19680 PF00675 Insulinase (Peptidase family M16) DJY80_19685 PF00375 Sodium:dicarboxylate symporter family DJY80_19695 PF06917 Periplasmic pectate lyase DJY80_19700 PF06178 Oligogalacturonate-specific porin protein (KdgM) DJY80_19705 PF00672 HAMP domain DJY80_19705 PF17154 Gammaproteobacterial periplasmic sensor domain DJY80_19705 PF00563 EAL domain DJY80_19705 PF00990 Diguanylate cyclase, GGDEF domain DJY80_19710 PF01270 Glycosyl hydrolases family 8 DJY80_19715 PF01270 Glycosyl hydrolases family 8 DJY80_19720 PF00005 ABC transporter DJY80_19720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_19725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJY80_19725 PF00005 ABC transporter DJY80_19730 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_19730 PF12911 N-terminal TM domain of oligopeptide transport permease C DJY80_19735 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_19740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJY80_19750 PF17287 POTRA domain DJY80_19750 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJY80_19750 PF08479 POTRA domain, ShlB-type DJY80_19755 PF05594 Haemagluttinin repeat DJY80_19755 PF04829 Pre-toxin domain with VENN motif DJY80_19755 PF13332 Hemagglutinin repeat DJY80_19755 PF05860 haemagglutination activity domain DJY80_19765 PF07690 Major Facilitator Superfamily DJY80_19770 PF07730 Histidine kinase DJY80_19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_19770 PF05231 MASE1 DJY80_19775 PF01695 IstB-like ATP binding protein DJY80_19780 PF02796 Helix-turn-helix domain of resolvase DJY80_19780 PF00665 Integrase core domain DJY80_19785 PF09500 Putative thioesterase (yiiD_Cterm) DJY80_19785 PF00583 Acetyltransferase (GNAT) family DJY80_19790 PF05170 AsmA family DJY80_19795 PF00860 Permease family DJY80_19800 PF03616 Sodium/glutamate symporter DJY80_19810 PF00270 DEAD/DEAH box helicase DJY80_19810 PF17191 RecG wedge domain DJY80_19810 PF00271 Helicase conserved C-terminal domain DJY80_19815 PF12105 SpoU, rRNA methylase, C-terminal DJY80_19815 PF00588 SpoU rRNA Methylase family DJY80_19820 PF04607 Region found in RelA / SpoT proteins DJY80_19820 PF13291 ACT domain DJY80_19820 PF02824 TGS domain DJY80_19825 PF01192 RNA polymerase Rpb6 DJY80_19830 PF00625 Guanylate kinase DJY80_19835 PF01653 NAD-dependent DNA ligase adenylation domain DJY80_19835 PF03120 NAD-dependent DNA ligase OB-fold domain DJY80_19840 PF03458 UPF0126 domain DJY80_19845 PF03755 YicC-like family, N-terminal region DJY80_19845 PF08340 Domain of unknown function (DUF1732) DJY80_19850 PF03725 3' exoribonuclease family, domain 2 DJY80_19850 PF01138 3' exoribonuclease family, domain 1 DJY80_19855 PF00156 Phosphoribosyl transferase domain DJY80_19860 PF00440 Bacterial regulatory proteins, tetR family DJY80_19865 PF00692 dUTPase DJY80_19870 PF02441 Flavoprotein DJY80_19870 PF04127 DNA / pantothenate metabolism flavoprotein DJY80_19875 PF04002 RadC-like JAB domain DJY80_19885 PF00830 Ribosomal L28 family DJY80_19890 PF00471 Ribosomal protein L33 DJY80_19895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DJY80_19895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DJY80_19895 PF06827 Zinc finger found in FPG and IleRS DJY80_19900 PF01467 Cytidylyltransferase-like DJY80_19905 PF00535 Glycosyl transferase family 2 DJY80_19910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DJY80_19915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DJY80_19920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DJY80_19925 PF01370 NAD dependent epimerase/dehydratase family DJY80_19930 PF00155 Aminotransferase class I and II DJY80_19935 PF00107 Zinc-binding dehydrogenase DJY80_19935 PF08240 Alcohol dehydrogenase GroES-like domain DJY80_19945 PF01551 Peptidase family M23 DJY80_19950 PF01676 Metalloenzyme superfamily DJY80_19950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DJY80_19955 PF00581 Rhodanese-like domain DJY80_19960 PF00462 Glutaredoxin DJY80_19965 PF02556 Preprotein translocase subunit SecB DJY80_19970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJY80_19970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJY80_19980 PF06426 Serine acetyltransferase, N-terminal DJY80_19980 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_19985 PF00588 SpoU rRNA Methylase family DJY80_19990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJY80_19990 PF02805 Metal binding domain of Ada DJY80_19990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJY80_19990 PF12833 Helix-turn-helix domain DJY80_19995 PF16527 Two-component sensor protein CpxA, periplasmic domain DJY80_19995 PF00672 HAMP domain DJY80_19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_19995 PF00512 His Kinase A (phospho-acceptor) domain DJY80_20000 PF00072 Response regulator receiver domain DJY80_20000 PF00486 Transcriptional regulatory protein, C terminal DJY80_20005 PF07813 LTXXQ motif family protein DJY80_20015 PF04754 Putative transposase, YhgA-like DJY80_20025 PF01545 Cation efflux family DJY80_20025 PF16916 Dimerisation domain of Zinc Transporter DJY80_20030 PF00365 Phosphofructokinase DJY80_20045 PF00939 Sodium:sulfate symporter transmembrane region DJY80_20050 PF03737 Aldolase/RraA DJY80_20055 PF01695 IstB-like ATP binding protein DJY80_20060 PF00665 Integrase core domain DJY80_20060 PF02796 Helix-turn-helix domain of resolvase DJY80_20065 PF02585 GlcNAc-PI de-N-acetylase DJY80_20070 PF03466 LysR substrate binding domain DJY80_20070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJY80_20075 PF00121 Triosephosphate isomerase DJY80_20080 PF07305 Protein of unknown function (DUF1454) DJY80_20085 PF05656 Protein of unknown function (DUF805) DJY80_20090 PF00970 Oxidoreductase FAD-binding domain DJY80_20090 PF00175 Oxidoreductase NAD-binding domain DJY80_20095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJY80_20100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_20100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_20105 PF00230 Major intrinsic protein DJY80_20120 PF06005 Cell division protein ZapB DJY80_20125 PF01797 Transposase IS200 like DJY80_20135 PF00664 ABC transporter transmembrane region DJY80_20135 PF03412 Peptidase C39 family DJY80_20135 PF00005 ABC transporter DJY80_20140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJY80_20140 PF00529 HlyD membrane-fusion protein of T1SS DJY80_20160 PF03737 Aldolase/RraA DJY80_20165 PF01040 UbiA prenyltransferase family DJY80_20170 PF07724 AAA domain (Cdc48 subfamily) DJY80_20170 PF00004 ATPase family associated with various cellular activities (AAA) DJY80_20170 PF10431 C-terminal, D2-small domain, of ClpB protein DJY80_20175 PF00227 Proteasome subunit DJY80_20180 PF05036 Sporulation related domain DJY80_20195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DJY80_20195 PF00271 Helicase conserved C-terminal domain DJY80_20195 PF18074 Primosomal protein N C-terminal domain DJY80_20195 PF17764 3′ DNA-binding domain (3′BD) DJY80_20195 PF00270 DEAD/DEAH box helicase DJY80_20200 PF01197 Ribosomal protein L31 DJY80_20205 PF05360 yiaA/B two helix domain DJY80_20210 PF01340 Met Apo-repressor, MetJ DJY80_20220 PF00742 Homoserine dehydrogenase DJY80_20220 PF00696 Amino acid kinase family DJY80_20220 PF03447 Homoserine dehydrogenase, NAD binding domain DJY80_20225 PF02219 Methylenetetrahydrofolate reductase DJY80_20240 PF00455 DeoR C terminal sensor domain DJY80_20240 PF08220 DeoR-like helix-turn-helix domain DJY80_20245 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DJY80_20245 PF01694 Rhomboid family DJY80_20250 PF00581 Rhodanese-like domain DJY80_20255 PF00196 Bacterial regulatory proteins, luxR family DJY80_20255 PF17874 MalT-like TPR region DJY80_20260 PF00343 Carbohydrate phosphorylase DJY80_20265 PF00343 Carbohydrate phosphorylase DJY80_20270 PF02446 4-alpha-glucanotransferase DJY80_20275 PF01106 NifU-like domain DJY80_20275 PF01521 Iron-sulphur cluster biosynthesis DJY80_20280 PF00156 Phosphoribosyl transferase domain DJY80_20285 PF00561 alpha/beta hydrolase fold DJY80_20290 PF07338 Protein of unknown function (DUF1471) DJY80_20295 PF09012 FeoC like transcriptional regulator DJY80_20300 PF07664 Ferrous iron transport protein B C terminus DJY80_20300 PF17910 FeoB cytosolic helical domain DJY80_20300 PF02421 Ferrous iron transport protein B DJY80_20300 PF07670 Nucleoside recognition DJY80_20305 PF04023 FeoA domain DJY80_20310 PF17674 HHH domain DJY80_20310 PF16921 Tex protein YqgF-like domain DJY80_20310 PF09371 Tex-like protein N-terminal domain DJY80_20310 PF00575 S1 RNA binding domain DJY80_20315 PF03449 Transcription elongation factor, N-terminal DJY80_20315 PF01272 Transcription elongation factor, GreA/GreB, C-term DJY80_20320 PF00072 Response regulator receiver domain DJY80_20320 PF00486 Transcriptional regulatory protein, C terminal DJY80_20325 PF00512 His Kinase A (phospho-acceptor) domain DJY80_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJY80_20325 PF00672 HAMP domain DJY80_20330 PF01293 Phosphoenolpyruvate carboxykinase DJY80_20335 PF01430 Hsp33 protein DJY80_20340 PF01479 S4 domain DJY80_20345 PF13419 Haloacid dehalogenase-like hydrolase DJY80_20350 PF07095 Intracellular growth attenuator protein IgaA DJY80_20355 PF00293 NUDIX domain DJY80_20360 PF00912 Transglycosylase DJY80_20360 PF17092 Penicillin-binding protein OB-like domain DJY80_20360 PF00905 Penicillin binding protein transpeptidase domain DJY80_20390 PF00263 Bacterial type II and III secretion system protein DJY80_20390 PF03958 Bacterial type II/III secretion system short domain DJY80_20395 PF01202 Shikimate kinase DJY80_20400 PF01761 3-dehydroquinate synthase DJY80_20405 PF05036 Sporulation related domain DJY80_20410 PF02086 D12 class N6 adenine-specific DNA methyltransferase DJY80_20415 PF00834 Ribulose-phosphate 3 epimerase family DJY80_20420 PF13419 Haloacid dehalogenase-like hydrolase DJY80_20425 PF00579 tRNA synthetases class I (W and Y) DJY80_20430 PF10414 Sirohaem synthase dimerisation region DJY80_20430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJY80_20430 PF14824 Sirohaem biosynthesis protein central DJY80_20435 PF01226 Formate/nitrite transporter DJY80_20440 PF13806 Rieske-like [2Fe-2S] domain DJY80_20445 PF04324 BFD-like [2Fe-2S] binding domain DJY80_20445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJY80_20445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJY80_20445 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJY80_20445 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJY80_20450 PF07969 Amidohydrolase family DJY80_20455 PF07690 Major Facilitator Superfamily DJY80_20465 PF00356 Bacterial regulatory proteins, lacI family DJY80_20475 PF02796 Helix-turn-helix domain of resolvase DJY80_20475 PF00665 Integrase core domain DJY80_20480 PF01695 IstB-like ATP binding protein DJY80_20485 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_20490 PF08501 Shikimate dehydrogenase substrate binding domain DJY80_20490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJY80_20490 PF01488 Shikimate / quinate 5-dehydrogenase DJY80_20495 PF01300 Telomere recombination DJY80_20500 PF01396 Topoisomerase DNA binding C4 zinc finger DJY80_20505 PF04361 Protein of unknown function (DUF494) DJY80_20510 PF02481 DNA recombination-mediator protein A DJY80_20510 PF17782 DprA winged helix domain DJY80_20515 PF01327 Polypeptide deformylase DJY80_20520 PF02911 Formyl transferase, C-terminal domain DJY80_20520 PF00551 Formyl transferase DJY80_20525 PF01189 16S rRNA methyltransferase RsmB/F DJY80_20525 PF01029 NusB family DJY80_20530 PF02254 TrkA-N domain DJY80_20530 PF02080 TrkA-C domain DJY80_20535 PF01741 Large-conductance mechanosensitive channel, MscL DJY80_20540 PF03889 Alternative ribosome-rescue factor A DJY80_20545 PF13411 MerR HTH family regulatory protein DJY80_20550 PF01196 Ribosomal protein L17 DJY80_20555 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DJY80_20555 PF01000 RNA polymerase Rpb3/RpoA insert domain DJY80_20555 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DJY80_20560 PF01479 S4 domain DJY80_20560 PF00163 Ribosomal protein S4/S9 N-terminal domain DJY80_20565 PF00411 Ribosomal protein S11 DJY80_20570 PF00416 Ribosomal protein S13/S18 DJY80_20575 PF00444 Ribosomal protein L36 DJY80_20580 PF00344 SecY translocase DJY80_20585 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DJY80_20590 PF00327 Ribosomal protein L30p/L7e DJY80_20595 PF03719 Ribosomal protein S5, C-terminal domain DJY80_20595 PF00333 Ribosomal protein S5, N-terminal domain DJY80_20600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DJY80_20605 PF00347 Ribosomal protein L6 DJY80_20610 PF00410 Ribosomal protein S8 DJY80_20615 PF00253 Ribosomal protein S14p/S29e DJY80_20620 PF00673 ribosomal L5P family C-terminus DJY80_20620 PF00281 Ribosomal protein L5 DJY80_20625 PF00467 KOW motif DJY80_20625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DJY80_20630 PF00238 Ribosomal protein L14p/L23e DJY80_20635 PF00366 Ribosomal protein S17 DJY80_20640 PF00831 Ribosomal L29 protein DJY80_20645 PF00252 Ribosomal protein L16p/L10e DJY80_20650 PF00189 Ribosomal protein S3, C-terminal domain DJY80_20650 PF07650 KH domain DJY80_20655 PF00237 Ribosomal protein L22p/L17e DJY80_20660 PF00203 Ribosomal protein S19 DJY80_20665 PF03947 Ribosomal Proteins L2, C-terminal domain DJY80_20665 PF00181 Ribosomal Proteins L2, RNA binding domain DJY80_20670 PF00276 Ribosomal protein L23 DJY80_20675 PF00573 Ribosomal protein L4/L1 family DJY80_20680 PF00297 Ribosomal protein L3 DJY80_20685 PF00338 Ribosomal protein S10p/S20e DJY80_20690 PF00210 Ferritin-like domain DJY80_20695 PF04324 BFD-like [2Fe-2S] binding domain DJY80_20705 PF01797 Transposase IS200 like DJY80_20710 PF03143 Elongation factor Tu C-terminal domain DJY80_20710 PF03144 Elongation factor Tu domain 2 DJY80_20710 PF00009 Elongation factor Tu GTP binding domain DJY80_20715 PF14492 Elongation Factor G, domain II DJY80_20715 PF03144 Elongation factor Tu domain 2 DJY80_20715 PF03764 Elongation factor G, domain IV DJY80_20715 PF00679 Elongation factor G C-terminus DJY80_20715 PF00009 Elongation factor Tu GTP binding domain DJY80_20720 PF00177 Ribosomal protein S7p/S5e DJY80_20725 PF00164 Ribosomal protein S12/S23 DJY80_20730 PF04077 DsrH like protein DJY80_20735 PF02635 DsrE/DsrF-like family DJY80_20740 PF02635 DsrE/DsrF-like family DJY80_20745 PF13309 HTH domain DJY80_20745 PF08348 YheO-like PAS domain DJY80_20750 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DJY80_20750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJY80_20755 PF04102 SlyX DJY80_20765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJY80_20770 PF09526 Probable metal-binding protein (DUF2387) DJY80_20775 PF02254 TrkA-N domain DJY80_20775 PF00999 Sodium/hydrogen exchanger family DJY80_20780 PF02525 Flavodoxin-like fold DJY80_20790 PF00535 Glycosyl transferase family 2 DJY80_20800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DJY80_20805 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_20810 PF00005 ABC transporter DJY80_20815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJY80_20820 PF01810 LysE type translocator DJY80_20825 PF00561 alpha/beta hydrolase fold DJY80_20830 PF06794 Uncharacterised protein family (UPF0270) DJY80_20835 PF00485 Phosphoribulokinase / Uridine kinase family DJY80_20845 PF02566 OsmC-like protein DJY80_20850 PF00027 Cyclic nucleotide-binding domain DJY80_20850 PF13545 Crp-like helix-turn-helix domain DJY80_20855 PF12805 FUSC-like inner membrane protein yccS DJY80_20860 PF00202 Aminotransferase class-III DJY80_20865 PF00117 Glutamine amidotransferase class-I DJY80_20870 PF05872 Bacterial protein of unknown function (DUF853) DJY80_20875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJY80_20885 PF01695 IstB-like ATP binding protein DJY80_20890 PF02796 Helix-turn-helix domain of resolvase DJY80_20890 PF00665 Integrase core domain DJY80_20900 PF00072 Response regulator receiver domain DJY80_20900 PF00196 Bacterial regulatory proteins, luxR family DJY80_20905 PF08019 Phosphoethanolamine transferase EptA/EptB DJY80_20905 PF00884 Sulfatase DJY80_20910 PF12146 Serine aminopeptidase, S33 DJY80_20915 PF00324 Amino acid permease DJY80_20920 PF00221 Aromatic amino acid lyase DJY80_20925 PF17392 Urocanase C-terminal domain DJY80_20925 PF17391 Urocanase N-terminal domain DJY80_20925 PF01175 Urocanase Rossmann-like domain DJY80_20930 PF00291 Pyridoxal-phosphate dependent enzyme DJY80_20935 PF00156 Phosphoribosyl transferase domain DJY80_20950 PF01497 Periplasmic binding protein DJY80_20955 PF01032 FecCD transport family DJY80_20960 PF01032 FecCD transport family DJY80_20965 PF00005 ABC transporter DJY80_21005 PF04606 Ogr/Delta-like zinc finger DJY80_21015 PF13356 Arm DNA-binding domain DJY80_21015 PF14659 Phage integrase, N-terminal SAM-like domain DJY80_21015 PF00589 Phage integrase family DJY80_21025 PF12833 Helix-turn-helix domain DJY80_21030 PF02653 Branched-chain amino acid transport system / permease component DJY80_21035 PF00005 ABC transporter DJY80_21040 PF13407 Periplasmic binding protein domain DJY80_21050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJY80_21050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJY80_21060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_21060 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_21070 PF00419 Fimbrial protein DJY80_21075 PF01757 Acyltransferase family DJY80_21095 PF00665 Integrase core domain DJY80_21095 PF02796 Helix-turn-helix domain of resolvase DJY80_21100 PF01695 IstB-like ATP binding protein DJY80_21125 PF05638 Type VI secretion system effector, Hcp DJY80_21135 PF07148 Maltose operon periplasmic protein precursor (MalM) DJY80_21140 PF02264 LamB porin DJY80_21145 PF00005 ABC transporter DJY80_21145 PF17912 MalK OB fold domain DJY80_21155 PF01547 Bacterial extracellular solute-binding protein DJY80_21160 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21160 PF14785 Maltose transport system permease protein MalF P2 domain DJY80_21165 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21170 PF06146 Phosphate-starvation-inducible E DJY80_21175 PF00342 Phosphoglucose isomerase DJY80_21180 PF01842 ACT domain DJY80_21180 PF00696 Amino acid kinase family DJY80_21190 PF05860 haemagglutination activity domain DJY80_21190 PF13332 Hemagglutinin repeat DJY80_21195 PF02310 B12 binding domain DJY80_21195 PF02607 B12 binding domain DJY80_21195 PF02965 Vitamin B12 dependent methionine synthase, activation domain DJY80_21195 PF02574 Homocysteine S-methyltransferase DJY80_21195 PF00809 Pterin binding enzyme DJY80_21205 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DJY80_21210 PF00463 Isocitrate lyase family DJY80_21215 PF01274 Malate synthase DJY80_21220 PF04204 Homoserine O-succinyltransferase DJY80_21265 PF00392 Bacterial regulatory proteins, gntR family DJY80_21265 PF07729 FCD domain DJY80_21270 PF07690 Major Facilitator Superfamily DJY80_21285 PF00294 pfkB family carbohydrate kinase DJY80_21290 PF05025 RbsD / FucU transport protein family DJY80_21295 PF02705 K+ potassium transporter DJY80_21300 PF17868 AAA lid domain DJY80_21300 PF07728 AAA domain (dynein-related subfamily) DJY80_21300 PF12592 Protein of unknown function (DUF3763) DJY80_21305 PF05762 VWA domain containing CoxE-like protein DJY80_21310 PF03590 Aspartate-ammonia ligase DJY80_21315 PF01037 Lrp/AsnC ligand binding domain DJY80_21320 PF00258 Flavodoxin DJY80_21330 PF13932 GidA associated domain DJY80_21330 PF01134 Glucose inhibited division protein A DJY80_21335 PF02527 rRNA small subunit methyltransferase G DJY80_21340 PF03899 ATP synthase I chain DJY80_21345 PF00119 ATP synthase A chain DJY80_21350 PF00137 ATP synthase subunit C DJY80_21355 PF00430 ATP synthase B/B' CF(0) DJY80_21360 PF00213 ATP synthase delta (OSCP) subunit DJY80_21365 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJY80_21365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_21365 PF00306 ATP synthase alpha/beta chain, C terminal domain DJY80_21370 PF00231 ATP synthase DJY80_21375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_21375 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJY80_21380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DJY80_21380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DJY80_21385 PF12804 MobA-like NTP transferase domain DJY80_21385 PF00132 Bacterial transferase hexapeptide (six repeats) DJY80_21395 PF01380 SIS domain DJY80_21400 PF12849 PBP superfamily domain DJY80_21405 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21410 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21415 PF00005 ABC transporter DJY80_21420 PF01895 PhoU domain DJY80_21430 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJY80_21435 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21440 PF00528 Binding-protein-dependent transport system inner membrane component DJY80_21445 PF13419 Haloacid dehalogenase-like hydrolase DJY80_21455 PF00860 Permease family DJY80_21475 PF12241 Trans-2-enoyl-CoA reductase catalytic region DJY80_21475 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DJY80_21475 PF07055 Enoyl reductase FAD binding domain DJY80_21480 PF10396 GTP-binding protein TrmE N-terminus DJY80_21480 PF01926 50S ribosome-binding GTPase DJY80_21480 PF12631 MnmE helical domain DJY80_21485 PF14849 YidC periplasmic domain DJY80_21485 PF02096 60Kd inner membrane protein DJY80_21490 PF01809 Putative membrane protein insertion efficiency factor DJY80_21495 PF00825 Ribonuclease P DJY80_21500 PF00468 Ribosomal protein L34 DJY80_21515 PF01051 Initiator Replication protein DJY80_21520 PF01797 Transposase IS200 like DJY80_21570 PF00154 recA bacterial DNA recombination protein DJY80_21580 PF01367 5'-3' exonuclease, C-terminal SAM fold DJY80_21580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJY80_21610 PF14579 Helix-hairpin-helix motif DJY80_21610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJY80_21610 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJY80_21610 PF02811 PHP domain DJY80_21625 PF11775 Cobalamin biosynthesis protein CobT VWA domain DJY80_21625 PF06213 Cobalamin biosynthesis protein CobT DJY80_21645 PF09255 Caf1 Capsule antigen DJY80_21650 PF13953 PapC C-terminal domain DJY80_21650 PF13954 PapC N-terminal domain DJY80_21650 PF00577 Outer membrane usher protein DJY80_21655 PF02753 Pili assembly chaperone PapD, C-terminal domain DJY80_21655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJY80_21660 PF06445 GyrI-like small molecule binding domain DJY80_21660 PF12833 Helix-turn-helix domain DJY80_21690 PF01695 IstB-like ATP binding protein DJY80_21695 PF02796 Helix-turn-helix domain of resolvase DJY80_21695 PF00665 Integrase core domain DJY80_21700 PF02195 ParB-like nuclease domain DJY80_21705 PF06006 Bacterial protein of unknown function (DUF905) DJY80_21725 PF07128 Protein of unknown function (DUF1380) DJY80_21735 PF01555 DNA methylase DJY80_21760 PF08775 ParB family DJY80_21760 PF02195 ParB-like nuclease domain DJY80_21765 PF13614 AAA domain DJY80_21765 PF18607 ParA helix turn helix domain DJY80_21780 PF00239 Resolvase, N terminal domain DJY80_21780 PF02796 Helix-turn-helix domain of resolvase DJY80_21785 PF04754 Putative transposase, YhgA-like DJY80_21800 PF13091 PLD-like domain DJY80_21810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DJY80_21825 PF02371 Transposase IS116/IS110/IS902 family DJY80_21825 PF01548 Transposase DJY80_21835 PF00872 Transposase, Mutator family DJY80_21865 PF02796 Helix-turn-helix domain of resolvase DJY80_21865 PF00665 Integrase core domain DJY80_21870 PF01695 IstB-like ATP binding protein DJY80_21875 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DJY80_21885 PF03335 Phage tail fibre repeat DJY80_21885 PF07484 Phage Tail Collar Domain DJY80_21885 PF08400 Prophage tail fibre N-terminal DJY80_21885 PF03335 Phage tail fibre repeat DJY80_21885 PF07484 Phage Tail Collar Domain DJY80_21885 PF08400 Prophage tail fibre N-terminal DJY80_22010 PF00664 ABC transporter transmembrane region DJY80_22010 PF00005 ABC transporter DJY80_22010 PF03412 Peptidase C39 family DJY80_22015 PF17762 HTH domain found in ParB protein DJY80_22015 PF02195 ParB-like nuclease domain DJY80_22020 PF17762 HTH domain found in ParB protein DJY80_22020 PF02195 ParB-like nuclease domain DJY80_22025 PF00270 DEAD/DEAH box helicase DJY80_22025 PF00271 Helicase conserved C-terminal domain DJY80_22025 PF17191 RecG wedge domain DJY80_22075 PF01797 Transposase IS200 like DJY80_22135 PF02387 IncFII RepA protein family DJY80_22165 PF00069 Protein kinase domain DJY80_22165 PF09632 Rac1-binding domain DJY80_22185 PF09013 YopH, N-terminal DJY80_22185 PF00102 Protein-tyrosine phosphatase DJY80_22205 PF01695 IstB-like ATP binding protein DJY80_22210 PF00665 Integrase core domain DJY80_22210 PF02796 Helix-turn-helix domain of resolvase DJY80_22225 PF09013 YopH, N-terminal DJY80_22230 PF02108 Flagellar assembly protein FliH DJY80_22235 PF06578 YOP proteins translocation protein K (YscK) DJY80_22240 PF01514 Secretory protein of YscJ/FliF family DJY80_22245 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI DJY80_22250 PF09025 YopR, type III needle-polymerisation regulator DJY80_22255 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) DJY80_22260 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DJY80_22265 PF08988 Type III secretion system, cytoplasmic E component of needle DJY80_22270 PF16697 Inner membrane component of T3SS, cytoplasmic domain DJY80_22270 PF16693 Inner membrane component of T3SS, periplasmic domain DJY80_22280 PF05932 Tir chaperone protein (CesT) family DJY80_22285 PF17551 Family of unknown function (DUF5463) DJY80_22290 PF02311 AraC-like ligand binding domain DJY80_22290 PF12833 Helix-turn-helix domain DJY80_22300 PF01312 FlhB HrpN YscU SpaS Family DJY80_22305 PF01311 Bacterial export proteins, family 1 DJY80_22310 PF01313 Bacterial export proteins, family 3 DJY80_22315 PF00813 FliP family DJY80_22320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJY80_22325 PF02120 Flagellar hook-length control protein FliK DJY80_22330 PF07321 Type III secretion protein YscO DJY80_22335 PF18269 T3SS EscN ATPase C-terminal domain DJY80_22335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJY80_22335 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJY80_22340 PF07201 HrpJ-like domain DJY80_22345 PF09059 TyeA DJY80_22355 PF09474 Type III secretion system YscX (type_III_YscX) DJY80_22365 PF00771 FHIPEP family DJY80_22370 PF09621 Type III secretion system regulator (LcrR) DJY80_22375 PF07216 LcrG protein DJY80_22380 PF04792 V antigen (LcrV) protein DJY80_22385 PF07720 Tetratricopeptide repeat DJY80_22390 PF04888 Secretion system effector C (SseC) like family DJY80_22395 PF05844 YopD protein DJY80_22415 PF12468 Type III secretion system leucine rich repeat protein DJY80_22425 PF00872 Transposase, Mutator family DJY80_22445 PF05932 Tir chaperone protein (CesT) family DJY80_22450 PF03543 Yersinia/Haemophilus virulence surface antigen DJY80_22465 PF05818 Enterobacterial TraT complement resistance protein DJY80_22470 PF05818 Enterobacterial TraT complement resistance protein DJY80_22485 PF13614 AAA domain DJY80_22490 PF18090 Centromere-binding protein HTH domain DJY80_22490 PF02195 ParB-like nuclease domain DJY80_22505 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DJY80_22515 PF03545 Yersinia virulence determinant (YopE) DJY80_22515 PF09020 YopE, N terminal DJY80_22520 PF05932 Tir chaperone protein (CesT) family DJY80_22530 PF00665 Integrase core domain DJY80_22565 PF02796 Helix-turn-helix domain of resolvase DJY80_22565 PF00239 Resolvase, N terminal domain DJY80_22570 PF01526 Tn3 transposase DDE domain DJY80_22570 PF13700 Domain of unknown function (DUF4158) DJY80_22595 PF08751 TrwC relaxase DJY80_22595 PF18340 DNA relaxase TraI 2B/2B-like domain DJY80_22595 PF07057 DNA helicase TraI DJY80_22595 PF18272 single-stranded DNA binding TraI N-terminal subdomain DJY80_22625 PF10723 Replication regulatory protein RepB DJY80_22650 PF01815 Rop protein DJY80_22655 PF01695 IstB-like ATP binding protein DJY80_22660 PF02796 Helix-turn-helix domain of resolvase DJY80_22660 PF00665 Integrase core domain DJY80_22670 PF05973 Phage derived protein Gp49-like (DUF891) DJY80_22680 PF01278 Omptin family DJY80_22690 PF01051 Initiator Replication protein