locus-tag	class	description
vBYpM3_00002	IPR038722	Ner, winged helix-turn-helix DNA-binding domain
vBYpM3_00002	IPR010982	Lambda repressor-like, DNA-binding domain superfamily
vBYpM3_00003	IPR009061	Putative DNA-binding domain superfamily
vBYpM3_00003	IPR009057	Homeobox-like domain superfamily
vBYpM3_00003	IPR003314	Mu-type HTH domain
vBYpM3_00003	IPR015126	Mu DNA binding, I gamma subdomain
vBYpM3_00003	IPR004189	Bacteriophage Mu, transposase
vBYpM3_00003	IPR012337	Ribonuclease H-like superfamily
vBYpM3_00003	IPR036397	Ribonuclease H superfamily
vBYpM3_00003	IPR015378	Transposase-like, Mu, C-terminal
vBYpM3_00003	IPR009004	Transposase, Mu, C-terminal
vBYpM3_00003	IPR036388	Winged helix-like DNA-binding domain superfamily
vBYpM3_00004	IPR001387	Cro/C1-type helix-turn-helix domain
vBYpM3_00004	IPR009084	B transposition protein, C-terminal
vBYpM3_00004	IPR036733	B transposition protein, C-terminal domain superfamily
vBYpM3_00004	IPR003593	AAA+ ATPase domain
vBYpM3_00004	IPR010982	Lambda repressor-like, DNA-binding domain superfamily
vBYpM3_00004	IPR027417	P-loop containing nucleoside triphosphate hydrolase
vBYpM3_00010	IPR009951	Host-nuclease inhibitor protein Gam
vBYpM3_00017	IPR014875	Mor transcription activator
vBYpM3_00017	IPR009057	Homeobox-like domain superfamily
vBYpM3_00020	IPR014875	Mor transcription activator
vBYpM3_00020	IPR009057	Homeobox-like domain superfamily
vBYpM3_00021	IPR002196	Glycoside hydrolase, family 24
vBYpM3_00021	IPR023346	Lysozyme-like domain superfamily
vBYpM3_00021	IPR034690	Endolysin T4 type
vBYpM3_00025	IPR036390	Winged helix DNA-binding domain superfamily
vBYpM3_00025	IPR013668	Ribonuclease R winged-helix domain
vBYpM3_00026	IPR021874	Bacteriophage Mu, Gp27
vBYpM3_00027	IPR012036	Bacteriophage Mu, Gp28
vBYpM3_00027	IPR004921	Terminase large subunit, T4likevirus-type
vBYpM3_00028	IPR009279	Protein of unknown function DUF935
vBYpM3_00029	IPR006528	Phage head morphogenesis domain
vBYpM3_00030	IPR006522	Phage virion morphogensis protein
vBYpM3_00031	IPR012106	Protease, Mu phage/prophage I type
vBYpM3_00032	IPR018774	Bacteriophage Mu, GpT
vBYpM3_00035	IPR014972	Bacteriophage Mu, Gp37
vBYpM3_00037	IPR020287	Tail sheath protein, C-terminal domain
vBYpM3_00037	IPR007067	Tail sheath protein
vBYpM3_00037	IPR035089	Tail sheath protein, subtilisin-like domain
vBYpM3_00038	IPR019596	Bacteriophage Mu, GpM, tail tube
vBYpM3_00039	IPR019289	Bacteriophage tail protein Gp41, putative
vBYpM3_00041	IPR009826	DNA circulation, N-terminal
vBYpM3_00044	IPR010877	Bacteriophage Mu, Gp46
vBYpM3_00045	IPR006949	Baseplate protein J-like
vBYpM3_00051	IPR006119	Resolvase, N-terminal catalytic domain
vBYpM3_00051	IPR036162	Resolvase-like, N-terminal catalytic domain superfamily
vBYpM3_00051	IPR006120	Resolvase, HTH domain
vBYpM3_00051	IPR009057	Homeobox-like domain superfamily
vBYpM3_00051	IPR006118	Recombinase, conserved site
vBYpM3_00052	IPR019294	Translational regulator Com
vBYpM3_00055	IPR003732	D-aminoacyl-tRNA deacylase DTD
vBYpM3_00055	IPR023509	D-aminoacyl-tRNA deacylase-like superfamily
vBYpM3_00056	IPR001270	ClpA/B family
vBYpM3_00056	IPR003593	AAA+ ATPase domain
vBYpM3_00056	IPR027417	P-loop containing nucleoside triphosphate hydrolase
vBYpM3_00056	IPR002611	IstB-like ATP-binding protein
vBYpM3_00056	IPR028350	DNA replication protein DnaC/insertion sequence putative ATP-binding protein
vBYpM3_00057	IPR006120	Resolvase, HTH domain
vBYpM3_00057	IPR001584	Integrase, catalytic core
vBYpM3_00057	IPR017894	HTH domain, IS21 transposase-type
vBYpM3_00057	IPR012337	Ribonuclease H-like superfamily
vBYpM3_00057	IPR036397	Ribonuclease H superfamily