locus-tag class description CEQ20_00010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_00010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_00015 PF01261 Xylose isomerase-like TIM barrel CEQ20_00020 PF02653 Branched-chain amino acid transport system / permease component CEQ20_00025 PF02653 Branched-chain amino acid transport system / permease component CEQ20_00030 PF00005 ABC transporter CEQ20_00040 PF08220 DeoR-like helix-turn-helix domain CEQ20_00040 PF00455 DeoR C terminal sensor domain CEQ20_00045 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_00050 PF01568 Molydopterin dinucleotide binding domain CEQ20_00050 PF00384 Molybdopterin oxidoreductase CEQ20_00050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_00055 PF13247 4Fe-4S dicluster domain CEQ20_00055 PF12800 4Fe-4S binding domain CEQ20_00060 PF04976 DMSO reductase anchor subunit (DmsC) CEQ20_00065 PF02613 Nitrate reductase delta subunit CEQ20_00070 PF01292 Prokaryotic cytochrome b561 CEQ20_00075 PF07361 Cytochrome b562 CEQ20_00080 PF00141 Peroxidase CEQ20_00095 PF00005 ABC transporter CEQ20_00100 PF02653 Branched-chain amino acid transport system / permease component CEQ20_00105 PF00456 Transketolase, thiamine diphosphate binding domain CEQ20_00110 PF02779 Transketolase, pyrimidine binding domain CEQ20_00110 PF02780 Transketolase, C-terminal domain CEQ20_00115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_00115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_00135 PF07690 Major Facilitator Superfamily CEQ20_00140 PF02464 Competence-damaged protein CEQ20_00145 PF00154 recA bacterial DNA recombination protein CEQ20_00150 PF02631 RecX family CEQ20_00155 PF02272 DHHA1 domain CEQ20_00155 PF01411 tRNA synthetases class II (A) CEQ20_00155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEQ20_00160 PF02599 Global regulator protein family CEQ20_00185 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_00190 PF09335 SNARE associated Golgi protein CEQ20_00195 PF04262 Glutamate-cysteine ligase CEQ20_00200 PF02664 S-Ribosylhomocysteinase (LuxS) CEQ20_00205 PF03471 Transporter associated domain CEQ20_00205 PF00571 CBS domain CEQ20_00205 PF01595 Cyclin M transmembrane N-terminal domain CEQ20_00210 PF01578 Cytochrome C assembly protein CEQ20_00215 PF00448 SRP54-type protein, GTPase domain CEQ20_00215 PF02881 SRP54-type protein, helical bundle domain CEQ20_00215 PF02978 Signal peptide binding domain CEQ20_00220 PF00886 Ribosomal protein S16 CEQ20_00225 PF05239 PRC-barrel domain CEQ20_00225 PF01782 RimM N-terminal domain CEQ20_00230 PF01746 tRNA (Guanine-1)-methyltransferase CEQ20_00235 PF01245 Ribosomal protein L19 CEQ20_00240 PF04338 Protein of unknown function, DUF481 CEQ20_00245 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEQ20_00250 PF04397 LytTr DNA-binding domain CEQ20_00250 PF00072 Response regulator receiver domain CEQ20_00255 PF00793 DAHP synthetase I family CEQ20_00260 PF02153 Prephenate dehydrogenase CEQ20_00260 PF01817 Chorismate mutase type II CEQ20_00265 PF00800 Prephenate dehydratase CEQ20_00265 PF01817 Chorismate mutase type II CEQ20_00270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEQ20_00275 PF13525 Outer membrane lipoprotein CEQ20_00285 PF01479 S4 domain CEQ20_00285 PF00849 RNA pseudouridylate synthase CEQ20_00295 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_00295 PF07724 AAA domain (Cdc48 subfamily) CEQ20_00295 PF17871 AAA lid domain CEQ20_00295 PF02861 Clp amino terminal domain, pathogenicity island component CEQ20_00295 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_00335 PF10043 Predicted periplasmic lipoprotein (DUF2279) CEQ20_00340 PF13091 PLD-like domain CEQ20_00345 PF13380 CoA binding domain CEQ20_00345 PF13607 Succinyl-CoA ligase like flavodoxin domain CEQ20_00345 PF00583 Acetyltransferase (GNAT) family CEQ20_00355 PF00085 Thioredoxin CEQ20_00360 PF00588 SpoU rRNA Methylase family CEQ20_00360 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEQ20_00365 PF07690 Major Facilitator Superfamily CEQ20_00370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_00370 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_00380 PF01047 MarR family CEQ20_00385 PF05437 Branched-chain amino acid transport protein (AzlD) CEQ20_00390 PF03591 AzlC protein CEQ20_00395 PF07690 Major Facilitator Superfamily CEQ20_00405 PF01425 Amidase CEQ20_00430 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_00435 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_00445 PF00005 ABC transporter CEQ20_00450 PF00266 Aminotransferase class-V CEQ20_00455 PF01546 Peptidase family M20/M25/M40 CEQ20_00455 PF07687 Peptidase dimerisation domain CEQ20_00460 PF00795 Carbon-nitrogen hydrolase CEQ20_00465 PF00155 Aminotransferase class I and II CEQ20_00470 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_00480 PF03079 ARD/ARD' family CEQ20_00485 PF01008 Initiation factor 2 subunit family CEQ20_00490 PF01636 Phosphotransferase enzyme family CEQ20_00500 PF08479 POTRA domain, ShlB-type CEQ20_00500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEQ20_00505 PF05860 haemagglutination activity domain CEQ20_00510 PF18254 HMW1 domain 2 CEQ20_00510 PF18071 HMW1C N-terminal CEQ20_00520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEQ20_00520 PF09317 Domain of unknown function (DUF1974) CEQ20_00520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEQ20_00525 PF13580 SIS domain CEQ20_00530 PF13230 Glutamine amidotransferases class-II CEQ20_00535 PF03734 L,D-transpeptidase catalytic domain CEQ20_00545 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEQ20_00545 PF11973 NQRA C-terminal domain CEQ20_00550 PF03116 NQR2, RnfD, RnfE family CEQ20_00555 PF04205 FMN-binding domain CEQ20_00560 PF02508 Rnf-Nqr subunit, membrane protein CEQ20_00565 PF02508 Rnf-Nqr subunit, membrane protein CEQ20_00570 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_00570 PF00970 Oxidoreductase FAD-binding domain CEQ20_00570 PF00175 Oxidoreductase NAD-binding domain CEQ20_00575 PF02424 ApbE family CEQ20_00585 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ20_00590 PF00817 impB/mucB/samB family CEQ20_00590 PF11799 impB/mucB/samB family C-terminal domain CEQ20_00590 PF11798 IMS family HHH motif CEQ20_00595 PF01546 Peptidase family M20/M25/M40 CEQ20_00595 PF07687 Peptidase dimerisation domain CEQ20_00600 PF03466 LysR substrate binding domain CEQ20_00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_00615 PF00156 Phosphoribosyl transferase domain CEQ20_00625 PF07417 Sigma factor-binding transcriptional regulator Crl CEQ20_00630 PF00696 Amino acid kinase family CEQ20_00630 PF01472 PUA domain CEQ20_00635 PF00171 Aldehyde dehydrogenase family CEQ20_00640 PF07238 PilZ domain CEQ20_00640 PF07317 Flagellar regulator YcgR CEQ20_00650 PF08241 Methyltransferase domain CEQ20_00665 PF01202 Shikimate kinase CEQ20_00670 PF06865 Pyrimidine/purine nucleoside phosphorylase CEQ20_00675 PF04381 Putative exonuclease, RdgC CEQ20_00680 PF00480 ROK family CEQ20_00685 PF13476 AAA domain CEQ20_00690 PF12320 Type 5 capsule protein repressor C-terminal domain CEQ20_00690 PF00149 Calcineurin-like phosphoesterase CEQ20_00695 PF00072 Response regulator receiver domain CEQ20_00695 PF00486 Transcriptional regulatory protein, C terminal CEQ20_00700 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_00700 PF00989 PAS fold CEQ20_00700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_00700 PF11808 Phosphate regulon sensor protein PhoR CEQ20_00705 PF12849 PBP superfamily domain CEQ20_00710 PF05525 Branched-chain amino acid transport protein CEQ20_00715 PF00324 Amino acid permease CEQ20_00720 PF02903 Alpha amylase, N-terminal ig-like domain CEQ20_00720 PF00128 Alpha amylase, catalytic domain CEQ20_00730 PF00106 short chain dehydrogenase CEQ20_00745 PF00578 AhpC/TSA family CEQ20_00745 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEQ20_00750 PF04336 Acyl carrier protein phosphodiesterase CEQ20_00755 PF02547 Queuosine biosynthesis protein CEQ20_00760 PF01702 Queuine tRNA-ribosyltransferase CEQ20_00765 PF02699 Preprotein translocase subunit CEQ20_00770 PF02355 Protein export membrane protein CEQ20_00770 PF07549 SecD/SecF GG Motif CEQ20_00770 PF13721 SecD export protein N-terminal TM region CEQ20_00775 PF07549 SecD/SecF GG Motif CEQ20_00775 PF02355 Protein export membrane protein CEQ20_00790 PF03477 ATP cone domain CEQ20_00795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ20_00795 PF01872 RibD C-terminal domain CEQ20_00800 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEQ20_00805 PF01029 NusB family CEQ20_00810 PF00586 AIR synthase related protein, N-terminal domain CEQ20_00810 PF02769 AIR synthase related protein, C-terminal domain CEQ20_00815 PF04608 Phosphatidylglycerophosphatase A CEQ20_00820 PF02779 Transketolase, pyrimidine binding domain CEQ20_00820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEQ20_00820 PF02780 Transketolase, C-terminal domain CEQ20_00825 PF00348 Polyprenyl synthetase CEQ20_00830 PF02609 Exonuclease VII small subunit CEQ20_00835 PF02926 THUMP domain CEQ20_00835 PF02568 Thiamine biosynthesis protein (ThiI) CEQ20_00840 PF01965 DJ-1/PfpI family CEQ20_00845 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEQ20_00845 PF02558 Ketopantoate reductase PanE/ApbA CEQ20_00855 PF04461 Protein of unknown function (DUF520) CEQ20_00860 PF07690 Major Facilitator Superfamily CEQ20_00865 PF01040 UbiA prenyltransferase family CEQ20_00870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CEQ20_00875 PF00510 Cytochrome c oxidase subunit III CEQ20_00880 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEQ20_00885 PF06481 COX Aromatic Rich Motif CEQ20_00885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEQ20_00895 PF07690 Major Facilitator Superfamily CEQ20_00900 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEQ20_00900 PF03923 Uncharacterized lipoprotein CEQ20_00905 PF01722 BolA-like protein CEQ20_00915 PF05697 Bacterial trigger factor protein (TF) CEQ20_00915 PF05698 Bacterial trigger factor protein (TF) C-terminus CEQ20_00915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ20_00920 PF00574 Clp protease CEQ20_00925 PF06689 ClpX C4-type zinc finger CEQ20_00925 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_00925 PF07724 AAA domain (Cdc48 subfamily) CEQ20_00930 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEQ20_00930 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_00930 PF05362 Lon protease (S16) C-terminal proteolytic domain CEQ20_00935 PF00216 Bacterial DNA-binding protein CEQ20_00940 PF13145 PPIC-type PPIASE domain CEQ20_00955 PF06508 Queuosine biosynthesis protein QueC CEQ20_00960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_00960 PF12793 Sugar transport-related sRNA regulator N-term CEQ20_00970 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_00975 PF01037 Lrp/AsnC ligand binding domain CEQ20_00975 PF13404 AsnC-type helix-turn-helix domain CEQ20_00980 PF00005 ABC transporter CEQ20_00980 PF00664 ABC transporter transmembrane region CEQ20_00985 PF00664 ABC transporter transmembrane region CEQ20_00985 PF00005 ABC transporter CEQ20_00990 PF00543 Nitrogen regulatory protein P-II CEQ20_00995 PF00909 Ammonium Transporter Family CEQ20_01005 PF09619 Type III secretion system lipoprotein chaperone (YscW) CEQ20_01010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEQ20_01025 PF05321 Haemolysin expression modulating protein CEQ20_01030 PF10757 Biofilm formation regulator YbaJ CEQ20_01040 PF00444 Ribosomal protein L36 CEQ20_01045 PF01197 Ribosomal protein L31 CEQ20_01050 PF00873 AcrB/AcrD/AcrF family CEQ20_01055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_01055 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_01060 PF00440 Bacterial regulatory proteins, tetR family CEQ20_01060 PF08361 MAATS-type transcriptional repressor, C-terminal region CEQ20_01065 PF02635 DsrE/DsrF-like family CEQ20_01070 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEQ20_01070 PF00924 Mechanosensitive ion channel CEQ20_01070 PF12795 Mechanosensitive ion channel porin domain CEQ20_01075 PF10689 Protein of unknown function (DUF2496) CEQ20_01085 PF04304 Protein of unknown function (DUF454) CEQ20_01090 PF00156 Phosphoribosyl transferase domain CEQ20_01095 PF12169 DNA polymerase III subunits gamma and tau domain III CEQ20_01095 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEQ20_01095 PF12170 DNA polymerase III tau subunit V interacting with alpha CEQ20_01100 PF02575 YbaB/EbfC DNA-binding family CEQ20_01105 PF13662 Toprim domain CEQ20_01105 PF02132 RecR protein CEQ20_01110 PF00183 Hsp90 protein CEQ20_01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_01115 PF05191 Adenylate kinase, active site lid CEQ20_01120 PF00762 Ferrochelatase CEQ20_01125 PF00970 Oxidoreductase FAD-binding domain CEQ20_01125 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_01125 PF00175 Oxidoreductase NAD-binding domain CEQ20_01130 PF00483 Nucleotidyl transferase CEQ20_01135 PF16363 GDP-mannose 4,6 dehydratase CEQ20_01140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEQ20_01145 PF01370 NAD dependent epimerase/dehydratase family CEQ20_01160 PF00535 Glycosyl transferase family 2 CEQ20_01170 PF13439 Glycosyltransferase Family 4 CEQ20_01170 PF00534 Glycosyl transferases group 1 CEQ20_01175 PF16363 GDP-mannose 4,6 dehydratase CEQ20_01180 PF01370 NAD dependent epimerase/dehydratase family CEQ20_01185 PF01050 Mannose-6-phosphate isomerase CEQ20_01185 PF00483 Nucleotidyl transferase CEQ20_01190 PF00535 Glycosyl transferase family 2 CEQ20_01195 PF01370 NAD dependent epimerase/dehydratase family CEQ20_01200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ20_01200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ20_01200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ20_01200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ20_01205 PF02706 Chain length determinant protein CEQ20_01210 PF00294 pfkB family carbohydrate kinase CEQ20_01215 PF02254 TrkA-N domain CEQ20_01215 PF00999 Sodium/hydrogen exchanger family CEQ20_01220 PF07690 Major Facilitator Superfamily CEQ20_01225 PF00149 Calcineurin-like phosphoesterase CEQ20_01225 PF02872 5'-nucleotidase, C-terminal domain CEQ20_01230 PF00149 Calcineurin-like phosphoesterase CEQ20_01230 PF02872 5'-nucleotidase, C-terminal domain CEQ20_01240 PF04073 Aminoacyl-tRNA editing domain CEQ20_01245 PF01963 TraB family CEQ20_01250 PF00403 Heavy-metal-associated domain CEQ20_01255 PF13411 MerR HTH family regulatory protein CEQ20_01260 PF01957 NfeD-like C-terminal, partner-binding CEQ20_01265 PF01145 SPFH domain / Band 7 family CEQ20_01265 PF16200 C-terminal region of band_7 CEQ20_01270 PF00085 Thioredoxin CEQ20_01275 PF00106 short chain dehydrogenase CEQ20_01280 PF13472 GDSL-like Lipase/Acylhydrolase family CEQ20_01285 PF00005 ABC transporter CEQ20_01295 PF02222 ATP-grasp domain CEQ20_01295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEQ20_01300 PF00731 AIR carboxylase CEQ20_01310 PF00149 Calcineurin-like phosphoesterase CEQ20_01315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEQ20_01320 PF09190 DALR domain CEQ20_01320 PF01406 tRNA synthetases class I (C) catalytic domain CEQ20_01330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEQ20_01330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEQ20_01340 PF00589 Phage integrase family CEQ20_01340 PF14659 Phage integrase, N-terminal SAM-like domain CEQ20_01340 PF13356 Arm DNA-binding domain CEQ20_01345 PF00589 Phage integrase family CEQ20_01345 PF14659 Phage integrase, N-terminal SAM-like domain CEQ20_01345 PF13356 Arm DNA-binding domain CEQ20_01400 PF01926 50S ribosome-binding GTPase CEQ20_01425 PF06067 Domain of unknown function (DUF932) CEQ20_01430 PF04002 RadC-like JAB domain CEQ20_01435 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CEQ20_01440 PF06755 CbtA_toxin of type IV toxin-antitoxin system CEQ20_01475 PF00589 Phage integrase family CEQ20_01490 PF01066 CDP-alcohol phosphatidyltransferase CEQ20_01500 PF01553 Acyltransferase CEQ20_01505 PF12146 Serine aminopeptidase, S33 CEQ20_01505 PF12147 Putative methyltransferase CEQ20_01510 PF00782 Dual specificity phosphatase, catalytic domain CEQ20_01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_01525 PF03466 LysR substrate binding domain CEQ20_01530 PF00248 Aldo/keto reductase family CEQ20_01535 PF00248 Aldo/keto reductase family CEQ20_01560 PF00849 RNA pseudouridylate synthase CEQ20_01560 PF01479 S4 domain CEQ20_01565 PF08007 Cupin superfamily protein CEQ20_01580 PF03212 Pertactin CEQ20_01580 PF16168 Adhesin of bacterial autotransporter system, probable stalk CEQ20_01580 PF03797 Autotransporter beta-domain CEQ20_01580 PF13018 Extended Signal Peptide of Type V secretion system CEQ20_01595 PF05638 Type VI secretion system effector, Hcp CEQ20_01610 PF13693 Winged helix-turn-helix DNA-binding CEQ20_01615 PF06832 Penicillin-Binding Protein C-terminus Family CEQ20_01615 PF00905 Penicillin binding protein transpeptidase domain CEQ20_01615 PF00912 Transglycosylase CEQ20_01620 PF01835 MG2 domain CEQ20_01620 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CEQ20_01620 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CEQ20_01620 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CEQ20_01620 PF07703 Alpha-2-macroglobulin bait region domain CEQ20_01620 PF17962 Bacterial macroglobulin domain 6 CEQ20_01620 PF00207 Alpha-2-macroglobulin family CEQ20_01635 PF00171 Aldehyde dehydrogenase family CEQ20_01640 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ20_01640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_01640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_01645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEQ20_01645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_01650 PF13407 Periplasmic binding protein domain CEQ20_01655 PF00005 ABC transporter CEQ20_01660 PF02653 Branched-chain amino acid transport system / permease component CEQ20_01665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_01665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEQ20_01670 PF00294 pfkB family carbohydrate kinase CEQ20_01675 PF01261 Xylose isomerase-like TIM barrel CEQ20_01680 PF04962 KduI/IolB family CEQ20_01690 PF00664 ABC transporter transmembrane region CEQ20_01690 PF00005 ABC transporter CEQ20_01715 PF00196 Bacterial regulatory proteins, luxR family CEQ20_01720 PF00313 'Cold-shock' DNA-binding domain CEQ20_01725 PF00313 'Cold-shock' DNA-binding domain CEQ20_01730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEQ20_01735 PF02416 mttA/Hcf106 family CEQ20_01745 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CEQ20_01745 PF04055 Radical SAM superfamily CEQ20_01750 PF03099 Biotin/lipoate A/B protein ligase family CEQ20_01755 PF04359 Protein of unknown function (DUF493) CEQ20_01760 PF00768 D-alanyl-D-alanine carboxypeptidase CEQ20_01760 PF07943 Penicillin-binding protein 5, C-terminal domain CEQ20_01765 PF03330 Lytic transglycolase CEQ20_01765 PF05036 Sporulation related domain CEQ20_01770 PF01098 Cell cycle protein CEQ20_01775 PF00905 Penicillin binding protein transpeptidase domain CEQ20_01775 PF03717 Penicillin-binding Protein dimerisation domain CEQ20_01780 PF02590 Predicted SPOUT methyltransferase CEQ20_01790 PF01467 Cytidylyltransferase-like CEQ20_01795 PF06144 DNA polymerase III, delta subunit CEQ20_01795 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEQ20_01800 PF04390 Lipopolysaccharide-assembly CEQ20_01805 PF13603 Leucyl-tRNA synthetase, Domain 2 CEQ20_01805 PF08264 Anticodon-binding domain of tRNA CEQ20_01805 PF00133 tRNA synthetases class I (I, L, M and V) CEQ20_01810 PF07295 Zinc-ribbon containing domain CEQ20_01815 PF00005 ABC transporter CEQ20_01820 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_01825 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_01830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_01835 PF00795 Carbon-nitrogen hydrolase CEQ20_01840 PF03471 Transporter associated domain CEQ20_01840 PF00571 CBS domain CEQ20_01845 PF02130 Uncharacterized protein family UPF0054 CEQ20_01850 PF02562 PhoH-like protein CEQ20_01855 PF04055 Radical SAM superfamily CEQ20_01855 PF00919 Uncharacterized protein family UPF0004 CEQ20_01855 PF01938 TRAM domain CEQ20_01860 PF01494 FAD binding domain CEQ20_01900 PF13537 Glutamine amidotransferase domain CEQ20_01900 PF00733 Asparagine synthase CEQ20_01905 PF13344 Haloacid dehalogenase-like hydrolase CEQ20_01910 PF00480 ROK family CEQ20_01910 PF01047 MarR family CEQ20_01915 PF01979 Amidohydrolase family CEQ20_01920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEQ20_01925 PF00367 phosphotransferase system, EIIB CEQ20_01925 PF02378 Phosphotransferase system, EIIC CEQ20_01925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEQ20_01930 PF01797 Transposase IS200 like CEQ20_01935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEQ20_01935 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ20_01940 PF03573 outer membrane porin, OprD family CEQ20_01945 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CEQ20_01945 PF03173 Putative carbohydrate binding domain CEQ20_01945 PF02838 Glycosyl hydrolase family 20, domain 2 CEQ20_01945 PF00728 Glycosyl hydrolase family 20, catalytic domain CEQ20_01950 PF01475 Ferric uptake regulator family CEQ20_01955 PF00258 Flavodoxin CEQ20_01965 PF01402 Ribbon-helix-helix protein, copG family CEQ20_01970 PF12697 Alpha/beta hydrolase family CEQ20_01980 PF13356 Arm DNA-binding domain CEQ20_01980 PF00589 Phage integrase family CEQ20_01990 PF13356 Arm DNA-binding domain CEQ20_01990 PF00589 Phage integrase family CEQ20_02010 PF13148 Protein of unknown function (DUF3987) CEQ20_02015 PF05930 Prophage CP4-57 regulatory protein (AlpA) CEQ20_02020 PF01527 Transposase CEQ20_02045 PF04397 LytTr DNA-binding domain CEQ20_02045 PF00072 Response regulator receiver domain CEQ20_02060 PF00589 Phage integrase family CEQ20_02060 PF13356 Arm DNA-binding domain CEQ20_02070 PF01668 SmpB protein CEQ20_02075 PF03364 Polyketide cyclase / dehydrase and lipid transport CEQ20_02080 PF03658 RnfH family Ubiquitin CEQ20_02085 PF04355 SmpA / OmlA family CEQ20_02090 PF02463 RecF/RecN/SMC N terminal domain CEQ20_02095 PF01513 ATP-NAD kinase CEQ20_02100 PF01025 GrpE CEQ20_02105 PF00285 Citrate synthase, C-terminal domain CEQ20_02110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEQ20_02115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEQ20_02120 PF00890 FAD binding domain CEQ20_02120 PF02910 Fumarate reductase flavoprotein C-term CEQ20_02125 PF13085 2Fe-2S iron-sulfur cluster binding domain CEQ20_02130 PF00676 Dehydrogenase E1 component CEQ20_02130 PF16078 2-oxoglutarate dehydrogenase N-terminus CEQ20_02130 PF02779 Transketolase, pyrimidine binding domain CEQ20_02130 PF16870 2-oxoglutarate dehydrogenase C-terminal CEQ20_02135 PF02817 e3 binding domain CEQ20_02135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEQ20_02135 PF00364 Biotin-requiring enzyme CEQ20_02140 PF08442 ATP-grasp domain CEQ20_02140 PF00549 CoA-ligase CEQ20_02145 PF02629 CoA binding domain CEQ20_02145 PF00549 CoA-ligase CEQ20_02150 PF01654 Cytochrome bd terminal oxidase subunit I CEQ20_02155 PF02322 Cytochrome bd terminal oxidase subunit II CEQ20_02160 PF08173 Membrane bound YbgT-like protein CEQ20_02165 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CEQ20_02170 PF03061 Thioesterase superfamily CEQ20_02175 PF01618 MotA/TolQ/ExbB proton channel family CEQ20_02180 PF02472 Biopolymer transport protein ExbD/TolR CEQ20_02185 PF06519 TolA C-terminal CEQ20_02185 PF06519 TolA C-terminal CEQ20_02190 PF07676 WD40-like Beta Propeller Repeat CEQ20_02190 PF04052 TolB amino-terminal domain CEQ20_02195 PF00691 OmpA family CEQ20_02200 PF16331 TolA binding protein trimerisation CEQ20_02200 PF13174 Tetratricopeptide repeat CEQ20_02235 PF02445 Quinolinate synthetase A protein CEQ20_02240 PF04973 Nicotinamide mononucleotide transporter CEQ20_02245 PF01545 Cation efflux family CEQ20_02255 PF00793 DAHP synthetase I family CEQ20_02260 PF00300 Histidine phosphatase superfamily (branch 1) CEQ20_02270 PF01263 Aldose 1-epimerase CEQ20_02275 PF10509 Galactokinase galactose-binding signature CEQ20_02275 PF08544 GHMP kinases C terminal CEQ20_02275 PF00288 GHMP kinases N terminal domain CEQ20_02280 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CEQ20_02280 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CEQ20_02285 PF16363 GDP-mannose 4,6 dehydratase CEQ20_02295 PF00005 ABC transporter CEQ20_02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_02300 PF03459 TOBE domain CEQ20_02305 PF10766 Multidrug efflux pump-associated protein AcrZ CEQ20_02315 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_02320 PF00005 ABC transporter CEQ20_02320 PF03459 TOBE domain CEQ20_02330 PF10282 Lactonase, 7-bladed beta-propeller CEQ20_02335 PF00202 Aminotransferase class-III CEQ20_02340 PF06968 Biotin and Thiamin Synthesis associated domain CEQ20_02340 PF04055 Radical SAM superfamily CEQ20_02345 PF00155 Aminotransferase class I and II CEQ20_02350 PF08241 Methyltransferase domain CEQ20_02365 PF17757 UvrB interaction domain CEQ20_02365 PF04851 Type III restriction enzyme, res subunit CEQ20_02365 PF02151 UvrB/uvrC motif CEQ20_02365 PF00271 Helicase conserved C-terminal domain CEQ20_02365 PF12344 Ultra-violet resistance protein B CEQ20_02370 PF09905 DNA-binding protein VF530 CEQ20_02375 PF01933 Uncharacterised protein family UPF0052 CEQ20_02380 PF06463 Molybdenum Cofactor Synthesis C CEQ20_02380 PF04055 Radical SAM superfamily CEQ20_02385 PF01967 MoaC family CEQ20_02390 PF02597 ThiS family CEQ20_02395 PF02391 MoaE protein CEQ20_02400 PF01027 Inhibitor of apoptosis-promoting Bax1 CEQ20_02405 PF05199 GMC oxidoreductase CEQ20_02405 PF00732 GMC oxidoreductase CEQ20_02410 PF00171 Aldehyde dehydrogenase family CEQ20_02415 PF13977 BetI-type transcriptional repressor, C-terminal CEQ20_02415 PF00440 Bacterial regulatory proteins, tetR family CEQ20_02420 PF02028 BCCT, betaine/carnitine/choline family transporter CEQ20_02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_02425 PF03466 LysR substrate binding domain CEQ20_02435 PF01048 Phosphorylase superfamily CEQ20_02440 PF03825 Nucleoside H+ symporter CEQ20_02445 PF13801 Heavy-metal resistance CEQ20_02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_02450 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_02455 PF02954 Bacterial regulatory protein, Fis family CEQ20_02455 PF00158 Sigma-54 interaction domain CEQ20_02455 PF00072 Response regulator receiver domain CEQ20_02460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEQ20_02465 PF03466 LysR substrate binding domain CEQ20_02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_02490 PF00005 ABC transporter CEQ20_02495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_02500 PF00440 Bacterial regulatory proteins, tetR family CEQ20_02500 PF09209 Tetracyclin repressor-like, C-terminal domain CEQ20_02505 PF00270 DEAD/DEAH box helicase CEQ20_02505 PF00271 Helicase conserved C-terminal domain CEQ20_02555 PF01207 Dihydrouridine synthase (Dus) CEQ20_02565 PF00768 D-alanyl-D-alanine carboxypeptidase CEQ20_02570 PF09330 D-lactate dehydrogenase, membrane binding CEQ20_02570 PF01565 FAD binding domain CEQ20_02575 PF01928 CYTH domain CEQ20_02580 PF01844 HNH endonuclease CEQ20_02590 PF04226 Transglycosylase associated protein CEQ20_02595 PF00005 ABC transporter CEQ20_02605 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_02610 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_02615 PF07308 Protein of unknown function (DUF1456) CEQ20_02620 PF02954 Bacterial regulatory protein, Fis family CEQ20_02620 PF13188 PAS domain CEQ20_02620 PF00158 Sigma-54 interaction domain CEQ20_02625 PF02653 Branched-chain amino acid transport system / permease component CEQ20_02630 PF02653 Branched-chain amino acid transport system / permease component CEQ20_02635 PF00005 ABC transporter CEQ20_02640 PF00005 ABC transporter CEQ20_02655 PF00581 Rhodanese-like domain CEQ20_02660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEQ20_02665 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_02670 PF00005 ABC transporter CEQ20_02675 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_02680 PF13520 Amino acid permease CEQ20_02685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEQ20_02685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEQ20_02685 PF01276 Orn/Lys/Arg decarboxylase, major domain CEQ20_02695 PF00892 EamA-like transporter family CEQ20_02705 PF00267 Gram-negative porin CEQ20_02710 PF06733 DEAD_2 CEQ20_02710 PF13307 Helicase C-terminal domain CEQ20_02715 PF00199 Catalase CEQ20_02715 PF06628 Catalase-related immune-responsive CEQ20_02720 PF07437 YfaZ precursor CEQ20_02725 PF03222 Tryptophan/tyrosine permease family CEQ20_02730 PF00994 Probable molybdopterin binding domain CEQ20_02735 PF03974 Ecotin CEQ20_02740 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_02745 PF00268 Ribonucleotide reductase, small chain CEQ20_02750 PF03477 ATP cone domain CEQ20_02750 PF02867 Ribonucleotide reductase, barrel domain CEQ20_02750 PF00317 Ribonucleotide reductase, all-alpha domain CEQ20_02760 PF00521 DNA gyrase/topoisomerase IV, subunit A CEQ20_02760 PF03989 DNA gyrase C-terminal domain, beta-propeller CEQ20_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_02765 PF00072 Response regulator receiver domain CEQ20_02765 PF09456 RcsC Alpha-Beta-Loop (ABL) CEQ20_02765 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_02770 PF00072 Response regulator receiver domain CEQ20_02770 PF00196 Bacterial regulatory proteins, luxR family CEQ20_02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_02775 PF01627 Hpt domain CEQ20_02775 PF16359 RcsD-ABL domain CEQ20_02780 PF07690 Major Facilitator Superfamily CEQ20_02785 PF00267 Gram-negative porin CEQ20_02800 PF00144 Beta-lactamase CEQ20_02810 PF12706 Beta-lactamase superfamily domain CEQ20_02815 PF02743 Cache domain CEQ20_02815 PF00672 HAMP domain CEQ20_02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_02825 PF01278 Omptin family CEQ20_02830 PF06183 DinI-like family CEQ20_02835 PF00717 Peptidase S24-like CEQ20_02835 PF01381 Helix-turn-helix CEQ20_02840 PF06530 Phage antitermination protein Q CEQ20_02845 PF17042 Nucleotide-binding C-terminal domain CEQ20_02845 PF07005 Sugar-binding N-terminal domain CEQ20_02850 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_02855 PF00455 DeoR C terminal sensor domain CEQ20_02855 PF08220 DeoR-like helix-turn-helix domain CEQ20_02860 PF01261 Xylose isomerase-like TIM barrel CEQ20_02880 PF17482 Phage tail sheath C-terminal domain CEQ20_02880 PF04984 Phage tail sheath protein subtilisin-like domain CEQ20_02920 PF04865 Baseplate J-like protein CEQ20_02930 PF07484 Phage Tail Collar Domain CEQ20_02935 PF01418 Helix-turn-helix domain, rpiR family CEQ20_02935 PF01380 SIS domain CEQ20_02940 PF00232 Glycosyl hydrolase family 1 CEQ20_02990 PF00884 Sulfatase CEQ20_02990 PF11893 Domain of unknown function (DUF3413) CEQ20_02995 PF07208 Protein of unknown function (DUF1414) CEQ20_03000 PF04245 37-kD nucleoid-associated bacterial protein CEQ20_03005 PF01797 Transposase IS200 like CEQ20_03015 PF01386 Ribosomal L25p family CEQ20_03020 PF00271 Helicase conserved C-terminal domain CEQ20_03020 PF04851 Type III restriction enzyme, res subunit CEQ20_03025 PF01479 S4 domain CEQ20_03025 PF00849 RNA pseudouridylate synthase CEQ20_03030 PF07690 Major Facilitator Superfamily CEQ20_03035 PF13989 YejG-like protein CEQ20_03040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_03040 PF00005 ABC transporter CEQ20_03045 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_03045 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03050 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_03060 PF00563 EAL domain CEQ20_03060 PF12792 CSS motif domain associated with EAL CEQ20_03065 PF00877 NlpC/P60 family CEQ20_03070 PF01569 PAP2 superfamily CEQ20_03075 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEQ20_03075 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEQ20_03085 PF00392 Bacterial regulatory proteins, gntR family CEQ20_03085 PF07729 FCD domain CEQ20_03090 PF08125 Mannitol dehydrogenase C-terminal domain CEQ20_03090 PF01232 Mannitol dehydrogenase Rossmann domain CEQ20_03095 PF03786 D-mannonate dehydratase (UxuA) CEQ20_03100 PF09285 Elongation factor P, C-terminal CEQ20_03100 PF08207 Elongation factor P (EF-P) KOW-like domain CEQ20_03100 PF01132 Elongation factor P (EF-P) OB domain CEQ20_03105 PF03222 Tryptophan/tyrosine permease family CEQ20_03110 PF03692 Putative zinc- or iron-chelating domain CEQ20_03120 PF01842 ACT domain CEQ20_03120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_03120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_03130 PF00171 Aldehyde dehydrogenase family CEQ20_03135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_03135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_03140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEQ20_03150 PF00005 ABC transporter CEQ20_03155 PF02653 Branched-chain amino acid transport system / permease component CEQ20_03160 PF00293 NUDIX domain CEQ20_03165 PF00381 PTS HPr component phosphorylation site CEQ20_03165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ20_03170 PF00294 pfkB family carbohydrate kinase CEQ20_03175 PF02378 Phosphotransferase system, EIIC CEQ20_03175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ20_03180 PF00486 Transcriptional regulatory protein, C terminal CEQ20_03185 PF17550 Family of unknown function CEQ20_03195 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_03195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_03200 PF00577 Outer membrane usher protein CEQ20_03200 PF13954 PapC N-terminal domain CEQ20_03200 PF13953 PapC C-terminal domain CEQ20_03205 PF01261 Xylose isomerase-like TIM barrel CEQ20_03210 PF03601 Conserved hypothetical protein 698 CEQ20_03215 PF03466 LysR substrate binding domain CEQ20_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_03220 PF00324 Amino acid permease CEQ20_03230 PF01032 FecCD transport family CEQ20_03235 PF00005 ABC transporter CEQ20_03240 PF07715 TonB-dependent Receptor Plug Domain CEQ20_03240 PF00593 TonB dependent receptor CEQ20_03245 PF00043 Glutathione S-transferase, C-terminal domain CEQ20_03245 PF13417 Glutathione S-transferase, N-terminal domain CEQ20_03260 PF03180 NLPA lipoprotein CEQ20_03265 PF00005 ABC transporter CEQ20_03265 PF09383 NIL domain CEQ20_03270 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03275 PF07943 Penicillin-binding protein 5, C-terminal domain CEQ20_03275 PF00768 D-alanyl-D-alanine carboxypeptidase CEQ20_03285 PF08220 DeoR-like helix-turn-helix domain CEQ20_03285 PF00455 DeoR C terminal sensor domain CEQ20_03290 PF01791 DeoC/LacD family aldolase CEQ20_03295 PF01569 PAP2 superfamily CEQ20_03310 PF06826 Predicted Permease Membrane Region CEQ20_03310 PF02080 TrkA-C domain CEQ20_03315 PF00462 Glutaredoxin CEQ20_03325 PF07214 Protein of unknown function (DUF1418) CEQ20_03335 PF10722 Putative bacterial sensory transduction regulator CEQ20_03340 PF13416 Bacterial extracellular solute-binding protein CEQ20_03345 PF00005 ABC transporter CEQ20_03345 PF08402 TOBE domain CEQ20_03350 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03355 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03360 PF10767 Protein of unknown function (DUF2593) CEQ20_03365 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ20_03370 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_03385 PF01032 FecCD transport family CEQ20_03390 PF00005 ABC transporter CEQ20_03395 PF03059 Nicotianamine synthase protein CEQ20_03400 PF10100 Staphylopine dehydrogenase CEQ20_03405 PF00892 EamA-like transporter family CEQ20_03410 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03415 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_03420 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_03425 PF00005 ABC transporter CEQ20_03430 PF01817 Chorismate mutase type II CEQ20_03435 PF12883 Protein of unknown function (DUF3828) CEQ20_03440 PF01370 NAD dependent epimerase/dehydratase family CEQ20_03445 PF11066 Protein of unknown function (DUF2867) CEQ20_03445 PF13460 NAD(P)H-binding CEQ20_03450 PF01212 Beta-eliminating lyase CEQ20_03455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_03455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_03455 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ20_03460 PF00175 Oxidoreductase NAD-binding domain CEQ20_03460 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_03460 PF00970 Oxidoreductase FAD-binding domain CEQ20_03465 PF03063 Prismane/CO dehydrogenase family CEQ20_03470 PF03956 Lysine exporter LysO CEQ20_03475 PF11398 Protein of unknown function (DUF2813) CEQ20_03480 PF04393 Protein of unknown function (DUF535) CEQ20_03485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_03490 PF02687 FtsX-like permease family CEQ20_03490 PF00005 ABC transporter CEQ20_03490 PF12704 MacB-like periplasmic core domain CEQ20_03495 PF00313 'Cold-shock' DNA-binding domain CEQ20_03505 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEQ20_03510 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_03510 PF07724 AAA domain (Cdc48 subfamily) CEQ20_03510 PF17871 AAA lid domain CEQ20_03510 PF02861 Clp amino terminal domain, pathogenicity island component CEQ20_03510 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_03515 PF01176 Translation initiation factor 1A / IF-1 CEQ20_03520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEQ20_03525 PF00664 ABC transporter transmembrane region CEQ20_03525 PF00005 ABC transporter CEQ20_03530 PF00005 ABC transporter CEQ20_03530 PF00664 ABC transporter transmembrane region CEQ20_03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_03540 PF01037 Lrp/AsnC ligand binding domain CEQ20_03545 PF17854 FtsK alpha domain CEQ20_03545 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEQ20_03545 PF01580 FtsK/SpoIIIE family CEQ20_03545 PF09397 Ftsk gamma domain CEQ20_03550 PF03548 Outer membrane lipoprotein carrier protein LolA CEQ20_03555 PF16193 AAA C-terminal domain CEQ20_03555 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_03555 PF12002 MgsA AAA+ ATPase C terminal CEQ20_03560 PF02403 Seryl-tRNA synthetase N-terminal domain CEQ20_03560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ20_03565 PF07690 Major Facilitator Superfamily CEQ20_03570 PF04055 Radical SAM superfamily CEQ20_03580 PF01228 Glycine radical CEQ20_03580 PF02901 Pyruvate formate lyase-like CEQ20_03585 PF01226 Formate/nitrite transporter CEQ20_03590 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CEQ20_03590 PF18381 YcaO cyclodehydratase C-terminal domain CEQ20_03595 PF00710 Asparaginase, N-terminal CEQ20_03595 PF17763 Glutaminase/Asparaginase C-terminal domain CEQ20_03610 PF00266 Aminotransferase class-V CEQ20_03615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEQ20_03620 PF02224 Cytidylate kinase CEQ20_03625 PF00575 S1 RNA binding domain CEQ20_03630 PF00216 Bacterial DNA-binding protein CEQ20_03640 PF03772 Competence protein CEQ20_03640 PF00753 Metallo-beta-lactamase superfamily CEQ20_03645 PF00664 ABC transporter transmembrane region CEQ20_03645 PF00005 ABC transporter CEQ20_03650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEQ20_03665 PF00313 'Cold-shock' DNA-binding domain CEQ20_03670 PF03966 Trm112p-like protein CEQ20_03675 PF02348 Cytidylyltransferase CEQ20_03685 PF01636 Phosphotransferase enzyme family CEQ20_03700 PF03882 MukF winged-helix domain CEQ20_03700 PF17192 MukF middle domain CEQ20_03700 PF17193 MukF C-terminal domain CEQ20_03705 PF04288 MukE-like family CEQ20_03710 PF04310 MukB N-terminal CEQ20_03710 PF16330 MukB hinge domain CEQ20_03715 PF01471 Putative peptidoglycan binding domain CEQ20_03715 PF03734 L,D-transpeptidase catalytic domain CEQ20_03720 PF05951 Bacterial protein of unknown function (DUF882) CEQ20_03725 PF00753 Metallo-beta-lactamase superfamily CEQ20_03735 PF00155 Aminotransferase class I and II CEQ20_03740 PF00267 Gram-negative porin CEQ20_03745 PF01336 OB-fold nucleic acid binding domain CEQ20_03745 PF00152 tRNA synthetases class II (D, K and N) CEQ20_03750 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CEQ20_03750 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CEQ20_03755 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEQ20_03755 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEQ20_03755 PF01433 Peptidase family M1 domain CEQ20_03760 PF01180 Dihydroorotate dehydrogenase CEQ20_03765 PF07126 Cell-division protein ZapC CEQ20_03770 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_03770 PF03476 MOSC N-terminal beta barrel domain CEQ20_03770 PF03473 MOSC domain CEQ20_03775 PF10672 S-adenosylmethionine-dependent methyltransferase CEQ20_03775 PF01170 Putative RNA methylase family UPF0020 CEQ20_03775 PF02926 THUMP domain CEQ20_03780 PF00005 ABC transporter CEQ20_03780 PF12848 ABC transporter CEQ20_03780 PF16326 ABC transporter C-terminal domain CEQ20_03785 PF04403 Paraquat-inducible protein A CEQ20_03790 PF02470 MlaD protein CEQ20_03795 PF03886 ABC-type transport auxiliary lipoprotein component CEQ20_03805 PF04957 Ribosome modulation factor CEQ20_03810 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ20_03810 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ20_03820 PF07977 FabA-like domain CEQ20_03825 PF13654 AAA domain CEQ20_03825 PF05362 Lon protease (S16) C-terminal proteolytic domain CEQ20_03830 PF17414 MatP C-terminal ribbon-helix-helix domain CEQ20_03830 PF06303 MatP N-terminal domain CEQ20_03835 PF00691 OmpA family CEQ20_03835 PF01389 OmpA-like transmembrane domain CEQ20_03840 PF03846 Cell division inhibitor SulA CEQ20_03845 PF04994 TfoX C-terminal domain CEQ20_03845 PF04993 TfoX N-terminal domain CEQ20_03850 PF12805 FUSC-like inner membrane protein yccS CEQ20_03855 PF03733 Inner membrane component domain CEQ20_03860 PF00580 UvrD/REP helicase N-terminal domain CEQ20_03860 PF12462 DNA helicase IV / RNA helicase N terminal CEQ20_03860 PF13361 UvrD-like helicase C-terminal domain CEQ20_03865 PF02142 MGS-like domain CEQ20_03870 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEQ20_03875 PF13380 CoA binding domain CEQ20_03880 PF08755 Hemimethylated DNA-binding protein YccV like CEQ20_03885 PF17785 PUA-like domain CEQ20_03885 PF10672 S-adenosylmethionine-dependent methyltransferase CEQ20_03890 PF00589 Phage integrase family CEQ20_03890 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CEQ20_03940 PF07102 Protein of unknown function (DUF1364) CEQ20_03945 PF06530 Phage antitermination protein Q CEQ20_03950 PF00145 C-5 cytosine-specific DNA methylase CEQ20_04060 PF06183 DinI-like family CEQ20_04065 PF06183 DinI-like family CEQ20_04070 PF00180 Isocitrate/isopropylmalate dehydrogenase CEQ20_04085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_04085 PF08447 PAS fold CEQ20_04090 PF05368 NmrA-like family CEQ20_04095 PF01638 HxlR-like helix-turn-helix CEQ20_04100 PF00328 Histidine phosphatase superfamily (branch 2) CEQ20_04105 PF14001 YdfZ protein CEQ20_04115 PF13404 AsnC-type helix-turn-helix domain CEQ20_04115 PF01037 Lrp/AsnC ligand binding domain CEQ20_04120 PF10777 Inner membrane protein YlaC CEQ20_04125 PF00550 Phosphopantetheine attachment site CEQ20_04125 PF00698 Acyl transferase domain CEQ20_04125 PF08659 KR domain CEQ20_04125 PF14765 Polyketide synthase dehydratase CEQ20_04125 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ20_04125 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ20_04125 PF16197 Ketoacyl-synthetase C-terminal extension CEQ20_04125 PF00107 Zinc-binding dehydrogenase CEQ20_04125 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_04130 PF02929 Beta galactosidase small chain CEQ20_04130 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEQ20_04130 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEQ20_04130 PF00703 Glycosyl hydrolases family 2 CEQ20_04130 PF16353 Domain of unknown function(DUF4981) CEQ20_04135 PF00313 'Cold-shock' DNA-binding domain CEQ20_04140 PF10781 Dextransucrase DSRB CEQ20_04145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_04145 PF00672 HAMP domain CEQ20_04145 PF02203 Tar ligand binding domain homologue CEQ20_04150 PF02308 MgtC family CEQ20_04155 PF00689 Cation transporting ATPase, C-terminus CEQ20_04155 PF00690 Cation transporter/ATPase, N-terminus CEQ20_04160 PF05247 Flagellar transcriptional activator (FlhD) CEQ20_04165 PF05280 Flagellar transcriptional activator (FlhC) CEQ20_04170 PF01618 MotA/TolQ/ExbB proton channel family CEQ20_04175 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEQ20_04175 PF00691 OmpA family CEQ20_04180 PF01627 Hpt domain CEQ20_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_04180 PF09078 CheY binding CEQ20_04180 PF01584 CheW-like domain CEQ20_04180 PF02895 Signal transducing histidine kinase, homodimeric domain CEQ20_04185 PF01584 CheW-like domain CEQ20_04200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_04200 PF02203 Tar ligand binding domain homologue CEQ20_04200 PF00672 HAMP domain CEQ20_04205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_04205 PF02203 Tar ligand binding domain homologue CEQ20_04205 PF00672 HAMP domain CEQ20_04210 PF01739 CheR methyltransferase, SAM binding domain CEQ20_04210 PF03705 CheR methyltransferase, all-alpha domain CEQ20_04215 PF01339 CheB methylesterase CEQ20_04215 PF00072 Response regulator receiver domain CEQ20_04220 PF00072 Response regulator receiver domain CEQ20_04225 PF04344 Chemotaxis phosphatase, CheZ CEQ20_04235 PF01510 N-acetylmuramoyl-L-alanine amidase CEQ20_04250 PF00842 Alanine racemase, C-terminal domain CEQ20_04250 PF01168 Alanine racemase, N-terminal domain CEQ20_04285 PF07351 Protein of unknown function (DUF1480) CEQ20_04300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_04300 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_04320 PF02470 MlaD protein CEQ20_04325 PF04403 Paraquat-inducible protein A CEQ20_04330 PF13185 GAF domain CEQ20_04335 PF04352 ProQ/FINO family CEQ20_04335 PF17516 ProQ C-terminal domain CEQ20_04340 PF17804 Tail specific protease N-terminal domain CEQ20_04340 PF03572 Peptidase family S41 CEQ20_04340 PF11818 C-terminal domain of tail specific protease (DUF3340) CEQ20_04340 PF00595 PDZ domain CEQ20_04345 PF01435 Peptidase family M48 CEQ20_04355 PF00419 Fimbrial protein CEQ20_04360 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_04360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_04365 PF13953 PapC C-terminal domain CEQ20_04365 PF00577 Outer membrane usher protein CEQ20_04365 PF13954 PapC N-terminal domain CEQ20_04375 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_04375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_04380 PF07690 Major Facilitator Superfamily CEQ20_04385 PF14583 Oligogalacturonate lyase CEQ20_04390 PF09339 IclR helix-turn-helix domain CEQ20_04390 PF01614 Bacterial transcriptional regulator CEQ20_04395 PF01510 N-acetylmuramoyl-L-alanine amidase CEQ20_04405 PF04307 LexA-binding, inner membrane-associated putative hydrolase CEQ20_04410 PF06178 Oligogalacturonate-specific porin protein (KdgM) CEQ20_04415 PF01547 Bacterial extracellular solute-binding protein CEQ20_04420 PF00005 ABC transporter CEQ20_04420 PF17912 MalK OB fold domain CEQ20_04420 PF03459 TOBE domain CEQ20_04425 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_04430 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_04435 PF06917 Periplasmic pectate lyase CEQ20_04445 PF04962 KduI/IolB family CEQ20_04450 PF07883 Cupin domain CEQ20_04455 PF00872 Transposase, Mutator family CEQ20_04460 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_04465 PF14002 YniB-like protein CEQ20_04480 PF00950 ABC 3 transport family CEQ20_04485 PF00950 ABC 3 transport family CEQ20_04490 PF00005 ABC transporter CEQ20_04495 PF01297 Zinc-uptake complex component A periplasmic CEQ20_04500 PF01464 Transglycosylase SLT domain CEQ20_04505 PF01914 MarC family integral membrane protein CEQ20_04520 PF13619 KTSC domain CEQ20_04525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEQ20_04525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ20_04525 PF03129 Anticodon binding domain CEQ20_04525 PF02824 TGS domain CEQ20_04530 PF00707 Translation initiation factor IF-3, C-terminal domain CEQ20_04530 PF05198 Translation initiation factor IF-3, N-terminal domain CEQ20_04535 PF01632 Ribosomal protein L35 CEQ20_04540 PF00453 Ribosomal protein L20 CEQ20_04545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEQ20_04545 PF01409 tRNA synthetases class II core domain (F) CEQ20_04550 PF01588 Putative tRNA binding domain CEQ20_04550 PF03147 Ferredoxin-fold anticodon binding domain CEQ20_04550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEQ20_04550 PF03483 B3/4 domain CEQ20_04550 PF03484 tRNA synthetase B5 domain CEQ20_04555 PF00216 Bacterial DNA-binding protein CEQ20_04560 PF01797 Transposase IS200 like CEQ20_04575 PF01032 FecCD transport family CEQ20_04580 PF00255 Glutathione peroxidase CEQ20_04585 PF00005 ABC transporter CEQ20_04590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEQ20_04595 PF00535 Glycosyl transferase family 2 CEQ20_04600 PF02911 Formyl transferase, C-terminal domain CEQ20_04600 PF00551 Formyl transferase CEQ20_04600 PF01370 NAD dependent epimerase/dehydratase family CEQ20_04605 PF01522 Polysaccharide deacetylase CEQ20_04610 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CEQ20_04615 PF00892 EamA-like transporter family CEQ20_04630 PF00877 NlpC/P60 family CEQ20_04635 PF03099 Biotin/lipoate A/B protein ligase family CEQ20_04635 PF10437 Bacterial lipoate protein ligase C-terminus CEQ20_04640 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CEQ20_04645 PF00793 DAHP synthetase I family CEQ20_04650 PF03618 Kinase/pyrophosphorylase CEQ20_04655 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ20_04655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEQ20_04655 PF00391 PEP-utilising enzyme, mobile domain CEQ20_04665 PF01594 AI-2E family transporter CEQ20_04670 PF13183 4Fe-4S dicluster domain CEQ20_04670 PF01565 FAD binding domain CEQ20_04670 PF02913 FAD linked oxidases, C-terminal domain CEQ20_04675 PF03061 Thioesterase superfamily CEQ20_04685 PF01521 Iron-sulphur cluster biosynthesis CEQ20_04690 PF01458 Uncharacterized protein family (UPF0051) CEQ20_04695 PF00005 ABC transporter CEQ20_04700 PF01458 Uncharacterized protein family (UPF0051) CEQ20_04705 PF00266 Aminotransferase class-V CEQ20_04710 PF02657 Fe-S metabolism associated domain CEQ20_04715 PF03734 L,D-transpeptidase catalytic domain CEQ20_04715 PF01476 LysM domain CEQ20_04715 PF17969 L,D-transpeptidase C-terminal domain CEQ20_04720 PF04728 Lipoprotein leucine-zipper CEQ20_04725 PF02887 Pyruvate kinase, alpha/beta domain CEQ20_04725 PF00224 Pyruvate kinase, barrel domain CEQ20_04740 PF01554 MatE CEQ20_04750 PF00677 Lumazine binding domain CEQ20_04760 PF07690 Major Facilitator Superfamily CEQ20_04765 PF03466 LysR substrate binding domain CEQ20_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_04770 PF00356 Bacterial regulatory proteins, lacI family CEQ20_04780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEQ20_04780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEQ20_04785 PF00877 NlpC/P60 family CEQ20_04795 PF00462 Glutaredoxin CEQ20_04805 PF00929 Exonuclease CEQ20_04810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ20_04815 PF18807 Tripartite Tc toxins repeat CEQ20_04815 PF14431 YwqJ-like deaminase CEQ20_04820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEQ20_04825 PF16925 Tetracyclin repressor-like, C-terminal domain CEQ20_04825 PF00440 Bacterial regulatory proteins, tetR family CEQ20_04830 PF00884 Sulfatase CEQ20_04830 PF08019 Phosphoethanolamine transferase EptA/EptB CEQ20_04835 PF06945 Protein of unknown function (DUF1289) CEQ20_04840 PF00248 Aldo/keto reductase family CEQ20_04850 PF01047 MarR family CEQ20_04855 PF05433 Glycine zipper 2TM domain CEQ20_04860 PF03702 Anhydro-N-acetylmuramic acid kinase CEQ20_04865 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CEQ20_04870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEQ20_04870 PF01243 Pyridoxamine 5'-phosphate oxidase CEQ20_04875 PF01479 S4 domain CEQ20_04875 PF00579 tRNA synthetases class I (W and Y) CEQ20_04880 PF08543 Phosphomethylpyrimidine kinase CEQ20_04885 PF02798 Glutathione S-transferase, N-terminal domain CEQ20_04885 PF00043 Glutathione S-transferase, C-terminal domain CEQ20_04895 PF11656 YjbD family (DUF3811) CEQ20_04900 PF04893 Yip1 domain CEQ20_04905 PF00854 POT family CEQ20_04915 PF00005 ABC transporter CEQ20_04920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_04920 PF00005 ABC transporter CEQ20_04925 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_04925 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_04930 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_04945 PF02954 Bacterial regulatory protein, Fis family CEQ20_04945 PF00158 Sigma-54 interaction domain CEQ20_04950 PF04012 PspA/IM30 family CEQ20_04955 PF06667 Phage shock protein B CEQ20_04960 PF04024 PspC domain CEQ20_04970 PF04317 YcjX-like family, DUF463 CEQ20_04975 PF05128 Domain of unknown function (DUF697) CEQ20_04990 PF00158 Sigma-54 interaction domain CEQ20_04990 PF18024 Helix-turn-helix domain CEQ20_04995 PF08534 Redoxin CEQ20_05000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEQ20_05000 PF13378 Enolase C-terminal domain-like CEQ20_05005 PF00246 Zinc carboxypeptidase CEQ20_05010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_05015 PF01544 CorA-like Mg2+ transporter protein CEQ20_05035 PF07859 alpha/beta hydrolase fold CEQ20_05035 PF13472 GDSL-like Lipase/Acylhydrolase family CEQ20_05040 PF01171 PP-loop family CEQ20_05045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_05045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CEQ20_05045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CEQ20_05045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CEQ20_05045 PF10371 Domain of unknown function CEQ20_05050 PF00893 Small Multidrug Resistance protein CEQ20_05055 PF02308 MgtC family CEQ20_05060 PF03891 Domain of unknown function (DUF333) CEQ20_05065 PF03724 META domain CEQ20_05070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_05070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_05075 PF11739 Dicarboxylate transport CEQ20_05080 PF13617 YnbE-like lipoprotein CEQ20_05085 PF07027 Protein of unknown function (DUF1318) CEQ20_05090 PF08125 Mannitol dehydrogenase C-terminal domain CEQ20_05090 PF01232 Mannitol dehydrogenase Rossmann domain CEQ20_05095 PF04198 Putative sugar-binding domain CEQ20_05095 PF00325 Bacterial regulatory proteins, crp family CEQ20_05100 PF02525 Flavodoxin-like fold CEQ20_05105 PF00271 Helicase conserved C-terminal domain CEQ20_05105 PF04408 Helicase associated domain (HA2) CEQ20_05105 PF11898 Domain of unknown function (DUF3418) CEQ20_05105 PF00270 DEAD/DEAH box helicase CEQ20_05105 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEQ20_05120 PF00089 Trypsin CEQ20_05135 PF01292 Prokaryotic cytochrome b561 CEQ20_05140 PF04264 YceI-like domain CEQ20_05160 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEQ20_05165 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_05165 PF00672 HAMP domain CEQ20_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_05170 PF00072 Response regulator receiver domain CEQ20_05170 PF00486 Transcriptional regulatory protein, C terminal CEQ20_05180 PF13520 Amino acid permease CEQ20_05185 PF07338 Protein of unknown function (DUF1471) CEQ20_05195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEQ20_05195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEQ20_05195 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEQ20_05200 PF02233 NAD(P) transhydrogenase beta subunit CEQ20_05210 PF00582 Universal stress protein family CEQ20_05215 PF13545 Crp-like helix-turn-helix domain CEQ20_05215 PF00027 Cyclic nucleotide-binding domain CEQ20_05220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEQ20_05220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEQ20_05225 PF00245 Alkaline phosphatase CEQ20_05235 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_05240 PF01842 ACT domain CEQ20_05245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_05245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_05245 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ20_05275 PF01048 Phosphorylase superfamily CEQ20_05275 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CEQ20_05280 PF00005 ABC transporter CEQ20_05285 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_05290 PF09084 NMT1/THI5 like CEQ20_05300 PF00005 ABC transporter CEQ20_05305 PF02653 Branched-chain amino acid transport system / permease component CEQ20_05310 PF13407 Periplasmic binding protein domain CEQ20_05320 PF00356 Bacterial regulatory proteins, lacI family CEQ20_05325 PF03553 Na+/H+ antiporter family CEQ20_05330 PF00155 Aminotransferase class I and II CEQ20_05340 PF00892 EamA-like transporter family CEQ20_05355 PF00106 short chain dehydrogenase CEQ20_05360 PF06932 Protein of unknown function (DUF1283) CEQ20_05365 PF06649 Protein of unknown function (DUF1161) CEQ20_05370 PF00654 Voltage gated chloride channel CEQ20_05380 PF00480 ROK family CEQ20_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_05385 PF03466 LysR substrate binding domain CEQ20_05390 PF07690 Major Facilitator Superfamily CEQ20_05395 PF05472 DNA replication terminus site-binding protein (Ter protein) CEQ20_05400 PF10415 Fumarase C C-terminus CEQ20_05400 PF00206 Lyase CEQ20_05405 PF01238 Phosphomannose isomerase type I CEQ20_05410 PF06097 Bacterial protein of unknown function (DUF945) CEQ20_05420 PF13593 SBF-like CPA transporter family (DUF4137) CEQ20_05425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_05425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEQ20_05430 PF02311 AraC-like ligand binding domain CEQ20_05430 PF12833 Helix-turn-helix domain CEQ20_05435 PF02653 Branched-chain amino acid transport system / permease component CEQ20_05440 PF00005 ABC transporter CEQ20_05445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ20_05450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_05455 PF11762 L-arabinose isomerase C-terminal domain CEQ20_05455 PF02610 L-arabinose isomerase CEQ20_05460 PF00005 ABC transporter CEQ20_05460 PF00664 ABC transporter transmembrane region CEQ20_05460 PF03412 Peptidase C39 family CEQ20_05465 PF13533 Biotin-lipoyl like CEQ20_05470 PF00005 ABC transporter CEQ20_05470 PF00664 ABC transporter transmembrane region CEQ20_05470 PF03412 Peptidase C39 family CEQ20_05475 PF10754 Protein of unknown function (DUF2569) CEQ20_05480 PF02508 Rnf-Nqr subunit, membrane protein CEQ20_05485 PF04060 Putative Fe-S cluster CEQ20_05490 PF13237 4Fe-4S dicluster domain CEQ20_05490 PF13375 RnfC Barrel sandwich hybrid domain CEQ20_05490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEQ20_05490 PF10531 SLBB domain CEQ20_05495 PF06445 GyrI-like small molecule binding domain CEQ20_05495 PF12833 Helix-turn-helix domain CEQ20_05500 PF03116 NQR2, RnfD, RnfE family CEQ20_05505 PF04205 FMN-binding domain CEQ20_05510 PF02508 Rnf-Nqr subunit, membrane protein CEQ20_05515 PF10576 Iron-sulfur binding domain of endonuclease III CEQ20_05515 PF00633 Helix-hairpin-helix motif CEQ20_05515 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ20_05520 PF01370 NAD dependent epimerase/dehydratase family CEQ20_05525 PF07690 Major Facilitator Superfamily CEQ20_05530 PF17876 Cold shock domain CEQ20_05530 PF00575 S1 RNA binding domain CEQ20_05530 PF00773 RNB domain CEQ20_05530 PF08206 Ribonuclease B OB domain CEQ20_05535 PF13722 5TM C-terminal transporter carbon starvation CstA CEQ20_05535 PF02554 Carbon starvation protein CstA CEQ20_05540 PF04328 Selenoprotein, putative CEQ20_05545 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEQ20_05555 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_05560 PF05433 Glycine zipper 2TM domain CEQ20_05565 PF01253 Translation initiation factor SUI1 CEQ20_05570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ20_05580 PF18073 Rubredoxin metal binding domain CEQ20_05585 PF06305 Lipopolysaccharide assembly protein A domain CEQ20_05590 PF01569 PAP2 superfamily CEQ20_05595 PF00925 GTP cyclohydrolase II CEQ20_05600 PF00330 Aconitase family (aconitate hydratase) CEQ20_05600 PF00694 Aconitase C-terminal domain CEQ20_05615 PF03466 LysR substrate binding domain CEQ20_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_05620 PF01751 Toprim domain CEQ20_05620 PF01396 Topoisomerase DNA binding C4 zinc finger CEQ20_05620 PF01131 DNA topoisomerase CEQ20_05620 PF08272 Topoisomerase I zinc-ribbon-like CEQ20_05630 PF10692 Protein of unknown function (DUF2498) CEQ20_05635 PF01343 Peptidase family S49 CEQ20_05635 PF08496 Peptidase family S49 N-terminal CEQ20_05640 PF00106 short chain dehydrogenase CEQ20_05645 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEQ20_05650 PF00849 RNA pseudouridylate synthase CEQ20_05650 PF01479 S4 domain CEQ20_05655 PF01300 Telomere recombination CEQ20_05660 PF02811 PHP domain CEQ20_05675 PF04715 Anthranilate synthase component I, N terminal region CEQ20_05675 PF00425 chorismate binding enzyme CEQ20_05680 PF00117 Glutamine amidotransferase class-I CEQ20_05685 PF02885 Glycosyl transferase family, helical bundle domain CEQ20_05685 PF00591 Glycosyl transferase family, a/b domain CEQ20_05690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEQ20_05690 PF00218 Indole-3-glycerol phosphate synthase CEQ20_05695 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_05700 PF00290 Tryptophan synthase alpha chain CEQ20_05710 PF03922 OmpW family CEQ20_05735 PF04279 Intracellular septation protein A CEQ20_05740 PF03061 Thioesterase superfamily CEQ20_05745 PF03544 Gram-negative bacterial TonB protein C-terminal CEQ20_05750 PF03795 YCII-related domain CEQ20_05765 PF13505 Outer membrane protein beta-barrel domain CEQ20_05775 PF13396 Phospholipase_D-nuclease N-terminal CEQ20_05775 PF13091 PLD-like domain CEQ20_05780 PF04269 Protein of unknown function, DUF440 CEQ20_05790 PF00005 ABC transporter CEQ20_05790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_05795 PF00005 ABC transporter CEQ20_05795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_05800 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_05800 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_05805 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_05810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_05815 PF01914 MarC family integral membrane protein CEQ20_05835 PF00265 Thymidine kinase CEQ20_05840 PF00816 H-NS histone family CEQ20_05845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEQ20_05845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEQ20_05845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEQ20_05850 PF00072 Response regulator receiver domain CEQ20_05855 PF02810 SEC-C motif CEQ20_05860 PF01842 ACT domain CEQ20_05860 PF00551 Formyl transferase CEQ20_05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_05890 PF03466 LysR substrate binding domain CEQ20_05895 PF03372 Endonuclease/Exonuclease/phosphatase family CEQ20_05900 PF00293 NUDIX domain CEQ20_05905 PF07383 Protein of unknown function (DUF1496) CEQ20_05910 PF01131 DNA topoisomerase CEQ20_05910 PF01751 Toprim domain CEQ20_05915 PF02769 AIR synthase related protein, C-terminal domain CEQ20_05915 PF00586 AIR synthase related protein, N-terminal domain CEQ20_05920 PF00881 Nitroreductase family CEQ20_05925 PF01343 Peptidase family S49 CEQ20_05930 PF17763 Glutaminase/Asparaginase C-terminal domain CEQ20_05930 PF00710 Asparaginase, N-terminal CEQ20_05935 PF00857 Isochorismatase family CEQ20_05940 PF07023 Protein of unknown function (DUF1315) CEQ20_05945 PF01641 SelR domain CEQ20_05950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ20_05950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ20_05955 PF01263 Aldose 1-epimerase CEQ20_05960 PF06629 MltA-interacting protein MipA CEQ20_05970 PF06798 PrkA serine protein kinase C-terminal domain CEQ20_05970 PF08298 PrkA AAA domain CEQ20_05975 PF04285 Protein of unknown function (DUF444) CEQ20_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_05985 PF03466 LysR substrate binding domain CEQ20_05990 PF05726 Pirin C-terminal cupin domain CEQ20_05990 PF02678 Pirin CEQ20_05995 PF07690 Major Facilitator Superfamily CEQ20_06000 PF01266 FAD dependent oxidoreductase CEQ20_06005 PF04293 SpoVR like protein CEQ20_06010 PF07840 FadR C-terminal domain CEQ20_06010 PF00392 Bacterial regulatory proteins, gntR family CEQ20_06020 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CEQ20_06025 PF02600 Disulfide bond formation protein DsbB CEQ20_06040 PF00266 Aminotransferase class-V CEQ20_06050 PF03692 Putative zinc- or iron-chelating domain CEQ20_06055 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ20_06060 PF13406 Transglycosylase SLT domain CEQ20_06065 PF05166 YcgL domain CEQ20_06075 PF03775 Septum formation inhibitor MinC, C-terminal domain CEQ20_06075 PF05209 Septum formation inhibitor MinC, N-terminal domain CEQ20_06080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEQ20_06085 PF03776 Septum formation topological specificity factor MinE CEQ20_06105 PF00501 AMP-binding enzyme CEQ20_06105 PF13193 AMP-binding enzyme C-terminal domain CEQ20_06115 PF03843 Outer membrane lipoprotein Slp family CEQ20_06120 PF00814 Glycoprotease family CEQ20_06125 PF04851 Type III restriction enzyme, res subunit CEQ20_06125 PF13307 Helicase C-terminal domain CEQ20_06130 PF01042 Endoribonuclease L-PSP CEQ20_06135 PF00893 Small Multidrug Resistance protein CEQ20_06140 PF00893 Small Multidrug Resistance protein CEQ20_06145 PF01081 KDPG and KHG aldolase CEQ20_06155 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEQ20_06155 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEQ20_06160 PF01418 Helix-turn-helix domain, rpiR family CEQ20_06160 PF01380 SIS domain CEQ20_06165 PF00224 Pyruvate kinase, barrel domain CEQ20_06165 PF02887 Pyruvate kinase, alpha/beta domain CEQ20_06175 PF03279 Bacterial lipid A biosynthesis acyltransferase CEQ20_06180 PF01551 Peptidase family M23 CEQ20_06180 PF08525 Opacity-associated protein A N-terminal motif CEQ20_06180 PF01476 LysM domain CEQ20_06185 PF01297 Zinc-uptake complex component A periplasmic CEQ20_06190 PF00005 ABC transporter CEQ20_06195 PF00950 ABC 3 transport family CEQ20_06200 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEQ20_06200 PF17864 RuvB AAA lid domain CEQ20_06200 PF05491 RuvB C-terminal winged helix domain CEQ20_06205 PF07499 RuvA, C-terminal domain CEQ20_06205 PF01330 RuvA N terminal domain CEQ20_06215 PF02075 Crossover junction endodeoxyribonuclease RuvC CEQ20_06220 PF01709 Transcriptional regulator CEQ20_06225 PF00293 NUDIX domain CEQ20_06230 PF01336 OB-fold nucleic acid binding domain CEQ20_06230 PF00152 tRNA synthetases class II (D, K and N) CEQ20_06230 PF02938 GAD domain CEQ20_06235 PF01904 Protein of unknown function DUF72 CEQ20_06240 PF01124 MAPEG family CEQ20_06245 PF13649 Methyltransferase domain CEQ20_06250 PF08003 Protein of unknown function (DUF1698) CEQ20_06260 PF06185 YecM protein CEQ20_06270 PF03485 Arginyl tRNA synthetase N terminal domain CEQ20_06270 PF00750 tRNA synthetases class I (R) CEQ20_06270 PF05746 DALR anticodon binding domain CEQ20_06280 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEQ20_06280 PF17287 POTRA domain CEQ20_06280 PF08479 POTRA domain, ShlB-type CEQ20_06285 PF03023 Lipid II flippase MurJ CEQ20_06295 PF04337 Protein of unknown function, DUF480 CEQ20_06300 PF13302 Acetyltransferase (GNAT) domain CEQ20_06305 PF07690 Major Facilitator Superfamily CEQ20_06310 PF07273 Protein of unknown function (DUF1439) CEQ20_06315 PF02613 Nitrate reductase delta subunit CEQ20_06320 PF02811 PHP domain CEQ20_06330 PF01325 Iron dependent repressor, N-terminal DNA binding domain CEQ20_06330 PF00480 ROK family CEQ20_06335 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ20_06345 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_06360 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ20_06375 PF00916 Sulfate permease family CEQ20_06375 PF01740 STAS domain CEQ20_06380 PF00793 DAHP synthetase I family CEQ20_06385 PF13369 Transglutaminase-like superfamily CEQ20_06390 PF04247 Invasion gene expression up-regulator, SirB CEQ20_06395 PF13847 Methyltransferase domain CEQ20_06395 PF17827 PrmC N-terminal domain CEQ20_06400 PF00472 RF-1 domain CEQ20_06400 PF03462 PCRF domain CEQ20_06405 PF01488 Shikimate / quinate 5-dehydrogenase CEQ20_06405 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEQ20_06405 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEQ20_06410 PF03550 Outer membrane lipoprotein LolB CEQ20_06415 PF08544 GHMP kinases C terminal CEQ20_06415 PF00288 GHMP kinases N terminal domain CEQ20_06420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEQ20_06420 PF14572 Phosphoribosyl synthetase-associated domain CEQ20_06425 PF10762 Protein of unknown function (DUF2583) CEQ20_06430 PF01195 Peptidyl-tRNA hydrolase CEQ20_06435 PF01926 50S ribosome-binding GTPase CEQ20_06435 PF06071 Protein of unknown function (DUF933) CEQ20_06440 PF13356 Arm DNA-binding domain CEQ20_06440 PF00589 Phage integrase family CEQ20_06475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CEQ20_06480 PF00486 Transcriptional regulatory protein, C terminal CEQ20_06480 PF00072 Response regulator receiver domain CEQ20_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_06485 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_06485 PF00672 HAMP domain CEQ20_06535 PF08242 Methyltransferase domain CEQ20_06600 PF01370 NAD dependent epimerase/dehydratase family CEQ20_06605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEQ20_06605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEQ20_06620 PF05962 HutD CEQ20_06625 PF01979 Amidohydrolase family CEQ20_06630 PF07702 UTRA domain CEQ20_06630 PF00392 Bacterial regulatory proteins, gntR family CEQ20_06635 PF01979 Amidohydrolase family CEQ20_06645 PF00267 Gram-negative porin CEQ20_06650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEQ20_06655 PF04996 Succinylarginine dihydrolase CEQ20_06660 PF00171 Aldehyde dehydrogenase family CEQ20_06665 PF04958 Arginine N-succinyltransferase beta subunit CEQ20_06670 PF00202 Aminotransferase class-III CEQ20_06675 PF00155 Aminotransferase class I and II CEQ20_06675 PF00392 Bacterial regulatory proteins, gntR family CEQ20_06685 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEQ20_06685 PF00672 HAMP domain CEQ20_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_06685 PF07730 Histidine kinase CEQ20_06690 PF01699 Sodium/calcium exchanger protein CEQ20_06695 PF02562 PhoH-like protein CEQ20_06710 PF13994 PgaD-like protein CEQ20_06715 PF00535 Glycosyl transferase family 2 CEQ20_06720 PF01522 Polysaccharide deacetylase CEQ20_06720 PF14883 Hypothetical glycosyl hydrolase family 13 CEQ20_06730 PF00557 Metallopeptidase family M24 CEQ20_06735 PF09313 Domain of unknown function (DUF1971) CEQ20_06735 PF03848 Tellurite resistance protein TehB CEQ20_06745 PF00578 AhpC/TSA family CEQ20_06750 PF02687 FtsX-like permease family CEQ20_06750 PF12704 MacB-like periplasmic core domain CEQ20_06750 PF00005 ABC transporter CEQ20_06760 PF12704 MacB-like periplasmic core domain CEQ20_06760 PF00005 ABC transporter CEQ20_06760 PF02687 FtsX-like permease family CEQ20_06770 PF10634 Fe2+ transport protein CEQ20_06775 PF03239 Iron permease FTR1 family CEQ20_06785 PF04960 Glutaminase CEQ20_06795 PF00455 DeoR C terminal sensor domain CEQ20_06795 PF08220 DeoR-like helix-turn-helix domain CEQ20_06800 PF00324 Amino acid permease CEQ20_06805 PF00155 Aminotransferase class I and II CEQ20_06810 PF02508 Rnf-Nqr subunit, membrane protein CEQ20_06820 PF04909 Amidohydrolase CEQ20_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_06840 PF03466 LysR substrate binding domain CEQ20_06845 PF03328 HpcH/HpaI aldolase/citrate lyase family CEQ20_06850 PF01575 MaoC like domain CEQ20_06855 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CEQ20_06855 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CEQ20_06860 PF00196 Bacterial regulatory proteins, luxR family CEQ20_06860 PF00072 Response regulator receiver domain CEQ20_06865 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_06865 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_06865 PF00072 Response regulator receiver domain CEQ20_06865 PF00989 PAS fold CEQ20_06865 PF01627 Hpt domain CEQ20_06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_06875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_06875 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_06880 PF13954 PapC N-terminal domain CEQ20_06880 PF00577 Outer membrane usher protein CEQ20_06880 PF13953 PapC C-terminal domain CEQ20_06890 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_06890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_06905 PF00005 ABC transporter CEQ20_06905 PF08402 TOBE domain CEQ20_06910 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_06915 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_06925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEQ20_06925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_07005 PF17482 Phage tail sheath C-terminal domain CEQ20_07005 PF04984 Phage tail sheath protein subtilisin-like domain CEQ20_07040 PF04606 Ogr/Delta-like zinc finger CEQ20_07060 PF01066 CDP-alcohol phosphatidyltransferase CEQ20_07065 PF01541 GIY-YIG catalytic domain CEQ20_07065 PF02151 UvrB/uvrC motif CEQ20_07065 PF08459 UvrC Helix-hairpin-helix N-terminal CEQ20_07070 PF00196 Bacterial regulatory proteins, luxR family CEQ20_07070 PF00072 Response regulator receiver domain CEQ20_07075 PF10769 Protein of unknown function (DUF2594) CEQ20_07080 PF06942 GlpM protein CEQ20_07095 PF13505 Outer membrane protein beta-barrel domain CEQ20_07105 PF00324 Amino acid permease CEQ20_07110 PF01344 Kelch motif CEQ20_07115 PF03358 NADPH-dependent FMN reductase CEQ20_07120 PF04261 Dyp-type peroxidase family CEQ20_07125 PF13473 Cupredoxin-like domain CEQ20_07125 PF09375 Imelysin CEQ20_07130 PF03239 Iron permease FTR1 family CEQ20_07135 PF00474 Sodium:solute symporter family CEQ20_07145 PF00171 Aldehyde dehydrogenase family CEQ20_07145 PF01619 Proline dehydrogenase CEQ20_07145 PF14850 DNA-binding domain of Proline dehydrogenase CEQ20_07145 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEQ20_07175 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_07180 PF02899 Phage integrase, N-terminal SAM-like domain CEQ20_07185 PF04542 Sigma-70 region 2 CEQ20_07185 PF04539 Sigma-70 region 3 CEQ20_07185 PF04545 Sigma-70, region 4 CEQ20_07190 PF00700 Bacterial flagellin C-terminal helical region CEQ20_07190 PF08884 Flagellin D3 domain CEQ20_07190 PF00669 Bacterial flagellin N-terminal helical region CEQ20_07195 PF07196 Flagellin hook IN motif CEQ20_07195 PF07195 Flagellar hook-associated protein 2 C-terminus CEQ20_07195 PF02465 Flagellar hook-associated protein 2 N-terminus CEQ20_07200 PF02561 Flagellar protein FliS CEQ20_07205 PF05400 Flagellar protein FliT CEQ20_07210 PF01966 HD domain CEQ20_07215 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ20_07235 PF02049 Flagellar hook-basal body complex protein FliE CEQ20_07240 PF01514 Secretory protein of YscJ/FliF family CEQ20_07240 PF08345 Flagellar M-ring protein C-terminal CEQ20_07245 PF01706 FliG C-terminal domain CEQ20_07245 PF14841 FliG middle domain CEQ20_07245 PF14842 FliG N-terminal domain CEQ20_07250 PF02108 Flagellar assembly protein FliH CEQ20_07255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_07255 PF18269 T3SS EscN ATPase C-terminal domain CEQ20_07260 PF02050 Flagellar FliJ protein CEQ20_07265 PF02120 Flagellar hook-length control protein FliK CEQ20_07270 PF03748 Flagellar basal body-associated protein FliL CEQ20_07275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ20_07275 PF02154 Flagellar motor switch protein FliM CEQ20_07280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ20_07280 PF16973 Flagellar motor switch protein FliN N-terminal CEQ20_07285 PF04347 Flagellar biosynthesis protein, FliO CEQ20_07290 PF00813 FliP family CEQ20_07295 PF01313 Bacterial export proteins, family 3 CEQ20_07300 PF01311 Bacterial export proteins, family 1 CEQ20_07310 PF00294 pfkB family carbohydrate kinase CEQ20_07315 PF02653 Branched-chain amino acid transport system / permease component CEQ20_07320 PF00005 ABC transporter CEQ20_07325 PF13407 Periplasmic binding protein domain CEQ20_07330 PF02653 Branched-chain amino acid transport system / permease component CEQ20_07335 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_07340 PF04198 Putative sugar-binding domain CEQ20_07345 PF00669 Bacterial flagellin N-terminal helical region CEQ20_07350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_07350 PF00460 Flagella basal body rod protein CEQ20_07355 PF10135 Rod binding protein CEQ20_07355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEQ20_07360 PF02119 Flagellar P-ring protein CEQ20_07365 PF02107 Flagellar L-ring protein CEQ20_07370 PF00460 Flagella basal body rod protein CEQ20_07370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_07375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_07375 PF00460 Flagella basal body rod protein CEQ20_07380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_07380 PF07559 Flagellar basal body protein FlaE CEQ20_07380 PF00460 Flagella basal body rod protein CEQ20_07385 PF13860 FlgD Ig-like domain CEQ20_07385 PF03963 Flagellar hook capping protein - N-terminal region CEQ20_07385 PF13861 FlgD Tudor-like domain CEQ20_07390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_07390 PF00460 Flagella basal body rod protein CEQ20_07395 PF00460 Flagella basal body rod protein CEQ20_07400 PF17656 FlgA N-terminal domain CEQ20_07400 PF13144 Chaperone for flagella basal body P-ring formation CEQ20_07405 PF04316 Anti-sigma-28 factor, FlgM CEQ20_07410 PF05130 FlgN protein CEQ20_07415 PF09134 Invasin, domain 3 CEQ20_07415 PF02369 Bacterial Ig-like domain (group 1) CEQ20_07415 PF11924 Inverse autotransporter, beta-domain CEQ20_07415 PF07979 Intimin C-type lectin domain CEQ20_07420 PF06366 Flagellar protein FlhE CEQ20_07425 PF00771 FHIPEP family CEQ20_07430 PF01312 FlhB HrpN YscU SpaS Family CEQ20_07450 PF10709 Protein of unknown function (DUF2511) CEQ20_07460 PF04234 CopC domain CEQ20_07465 PF00210 Ferritin-like domain CEQ20_07470 PF06440 DNA polymerase III, theta subunit CEQ20_07475 PF00561 alpha/beta hydrolase fold CEQ20_07480 PF00326 Prolyl oligopeptidase family CEQ20_07480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CEQ20_07485 PF13995 YebF-like protein CEQ20_07495 PF07130 YebG protein CEQ20_07500 PF00270 DEAD/DEAH box helicase CEQ20_07500 PF00271 Helicase conserved C-terminal domain CEQ20_07500 PF03880 DbpA RNA binding domain CEQ20_07505 PF02222 ATP-grasp domain CEQ20_07510 PF03701 Uncharacterised protein family (UPF0181) CEQ20_07515 PF00425 chorismate binding enzyme CEQ20_07515 PF04715 Anthranilate synthase component I, N terminal region CEQ20_07520 PF00293 NUDIX domain CEQ20_07525 PF03313 Serine dehydratase alpha chain CEQ20_07525 PF03315 Serine dehydratase beta chain CEQ20_07530 PF01613 Flavin reductase like domain CEQ20_07535 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CEQ20_07535 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CEQ20_07540 PF07690 Major Facilitator Superfamily CEQ20_07545 PF03328 HpcH/HpaI aldolase/citrate lyase family CEQ20_07550 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ20_07555 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CEQ20_07560 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEQ20_07565 PF00171 Aldehyde dehydrogenase family CEQ20_07570 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ20_07575 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ20_07580 PF01047 MarR family CEQ20_07585 PF03471 Transporter associated domain CEQ20_07585 PF03741 Integral membrane protein TerC family CEQ20_07590 PF03830 PTS system sorbose subfamily IIB component CEQ20_07590 PF03610 PTS system fructose IIA component CEQ20_07595 PF03609 PTS system sorbose-specific iic component CEQ20_07600 PF03613 PTS system mannose/fructose/sorbose family IID component CEQ20_07605 PF06173 Protein of unknown function (DUF986) CEQ20_07610 PF02659 Putative manganese efflux pump CEQ20_07615 PF00593 TonB dependent receptor CEQ20_07615 PF07715 TonB-dependent Receptor Plug Domain CEQ20_07620 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_07620 PF13426 PAS domain CEQ20_07620 PF00563 EAL domain CEQ20_07620 PF08448 PAS fold CEQ20_07620 PF05231 MASE1 CEQ20_07620 PF08447 PAS fold CEQ20_07630 PF13847 Methyltransferase domain CEQ20_07640 PF00313 'Cold-shock' DNA-binding domain CEQ20_07645 PF10736 Protein of unknown function (DUF2627) CEQ20_07655 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CEQ20_07660 PF00324 Amino acid permease CEQ20_07680 PF13974 YebO-like protein CEQ20_07685 PF13998 MgrB protein CEQ20_07690 PF13996 YobH-like protein CEQ20_07695 PF10964 Protein of unknown function (DUF2766) CEQ20_07715 PF00664 ABC transporter transmembrane region CEQ20_07715 PF00005 ABC transporter CEQ20_07735 PF06167 Glucose-regulated metallo-peptidase M90 CEQ20_07745 PF00356 Bacterial regulatory proteins, lacI family CEQ20_07745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ20_07750 PF01306 LacY proton/sugar symporter CEQ20_07755 PF16875 Glycosyl hydrolase family 36 N-terminal domain CEQ20_07755 PF16874 Glycosyl hydrolase family 36 C-terminal domain CEQ20_07765 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CEQ20_07765 PF01648 4'-phosphopantetheinyl transferase superfamily CEQ20_07770 PF03480 Bacterial extracellular solute-binding protein, family 7 CEQ20_07780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEQ20_07785 PF00072 Response regulator receiver domain CEQ20_07785 PF00196 Bacterial regulatory proteins, luxR family CEQ20_07795 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CEQ20_07805 PF01522 Polysaccharide deacetylase CEQ20_07815 PF01554 MatE CEQ20_07820 PF00764 Arginosuccinate synthase CEQ20_07825 PF01070 FMN-dependent dehydrogenase CEQ20_07835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEQ20_07835 PF13378 Enolase C-terminal domain-like CEQ20_07840 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ20_07850 PF04134 Protein of unknown function, DUF393 CEQ20_07855 PF07690 Major Facilitator Superfamily CEQ20_07865 PF02369 Bacterial Ig-like domain (group 1) CEQ20_07865 PF11924 Inverse autotransporter, beta-domain CEQ20_07865 PF09134 Invasin, domain 3 CEQ20_07870 PF04363 Protein of unknown function (DUF496) CEQ20_07880 PF00929 Exonuclease CEQ20_07880 PF08411 Exonuclease C-terminal CEQ20_07890 PF13520 Amino acid permease CEQ20_07900 PF00465 Iron-containing alcohol dehydrogenase CEQ20_07905 PF00005 ABC transporter CEQ20_07910 PF02653 Branched-chain amino acid transport system / permease component CEQ20_07930 PF01370 NAD dependent epimerase/dehydratase family CEQ20_07940 PF08029 HisG, C-terminal domain CEQ20_07940 PF01634 ATP phosphoribosyltransferase CEQ20_07945 PF00815 Histidinol dehydrogenase CEQ20_07950 PF00155 Aminotransferase class I and II CEQ20_07955 PF00475 Imidazoleglycerol-phosphate dehydratase CEQ20_07960 PF00117 Glutamine amidotransferase class-I CEQ20_07965 PF00977 Histidine biosynthesis protein CEQ20_07970 PF00977 Histidine biosynthesis protein CEQ20_07975 PF01502 Phosphoribosyl-AMP cyclohydrolase CEQ20_07975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEQ20_07980 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEQ20_07980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEQ20_07985 PF00483 Nucleotidyl transferase CEQ20_07990 PF00483 Nucleotidyl transferase CEQ20_07995 PF06276 Ferric iron reductase FhuF-like transporter CEQ20_07995 PF04183 IucA / IucC family CEQ20_08000 PF07715 TonB-dependent Receptor Plug Domain CEQ20_08000 PF07660 Secretin and TonB N terminus short domain CEQ20_08000 PF00593 TonB dependent receptor CEQ20_08005 PF01497 Periplasmic binding protein CEQ20_08010 PF01032 FecCD transport family CEQ20_08015 PF01032 FecCD transport family CEQ20_08020 PF00005 ABC transporter CEQ20_08025 PF04183 IucA / IucC family CEQ20_08025 PF06276 Ferric iron reductase FhuF-like transporter CEQ20_08035 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CEQ20_08040 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEQ20_08045 PF06276 Ferric iron reductase FhuF-like transporter CEQ20_08045 PF11575 FhuF 2Fe-2S C-terminal domain CEQ20_08050 PF00571 CBS domain CEQ20_08050 PF03741 Integral membrane protein TerC family CEQ20_08050 PF03471 Transporter associated domain CEQ20_08055 PF05170 AsmA family CEQ20_08060 PF00692 dUTPase CEQ20_08065 PF00485 Phosphoribulokinase / Uridine kinase family CEQ20_08070 PF10609 NUBPL iron-transfer P-loop NTPase CEQ20_08075 PF01588 Putative tRNA binding domain CEQ20_08075 PF09334 tRNA synthetases class I (M) CEQ20_08095 PF07690 Major Facilitator Superfamily CEQ20_08100 PF03788 LrgA family CEQ20_08105 PF04172 LrgB-like family CEQ20_08110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ20_08110 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ20_08115 PF00390 Malic enzyme, N-terminal domain CEQ20_08115 PF03949 Malic enzyme, NAD binding domain CEQ20_08120 PF02698 DUF218 domain CEQ20_08125 PF02653 Branched-chain amino acid transport system / permease component CEQ20_08130 PF00005 ABC transporter CEQ20_08135 PF13407 Periplasmic binding protein domain CEQ20_08140 PF04235 Protein of unknown function (DUF418) CEQ20_08145 PF01227 GTP cyclohydrolase I CEQ20_08150 PF06779 Uncharacterised MFS-type transporter YbfB CEQ20_08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_08155 PF03466 LysR substrate binding domain CEQ20_08160 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_08160 PF00107 Zinc-binding dehydrogenase CEQ20_08165 PF00756 Putative esterase CEQ20_08180 PF13533 Biotin-lipoyl like CEQ20_08185 PF00005 ABC transporter CEQ20_08195 PF03453 MoeA N-terminal region (domain I and II) CEQ20_08195 PF03454 MoeA C-terminal region (domain IV) CEQ20_08195 PF00994 Probable molybdopterin binding domain CEQ20_08200 PF00899 ThiF family CEQ20_08210 PF12848 ABC transporter CEQ20_08210 PF00005 ABC transporter CEQ20_08305 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_08305 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_08305 PF17871 AAA lid domain CEQ20_08305 PF07724 AAA domain (Cdc48 subfamily) CEQ20_08320 PF00691 OmpA family CEQ20_08320 PF05736 OprF membrane domain CEQ20_08345 PF00698 Acyl transferase domain CEQ20_08350 PF00550 Phosphopantetheine attachment site CEQ20_08365 PF00378 Enoyl-CoA hydratase/isomerase CEQ20_08375 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CEQ20_08375 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CEQ20_08385 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ20_08385 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ20_08390 PF07977 FabA-like domain CEQ20_08405 PF01565 FAD binding domain CEQ20_08405 PF08031 Berberine and berberine like CEQ20_08425 PF04358 DsrC like protein CEQ20_08430 PF00708 Acylphosphatase CEQ20_08495 PF03245 Bacteriophage Rz lysis protein CEQ20_08525 PF03796 DnaB-like helicase C terminal domain CEQ20_08525 PF00772 DnaB-like helicase N terminal domain CEQ20_08555 PF01381 Helix-turn-helix CEQ20_08555 PF00717 Peptidase S24-like CEQ20_08640 PF00589 Phage integrase family CEQ20_08640 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CEQ20_08645 PF00180 Isocitrate/isopropylmalate dehydrogenase CEQ20_08650 PF00849 RNA pseudouridylate synthase CEQ20_08655 PF00293 NUDIX domain CEQ20_08665 PF04356 Protein of unknown function (DUF489) CEQ20_08670 PF00206 Lyase CEQ20_08670 PF08328 Adenylosuccinate lyase C-terminal CEQ20_08680 PF00072 Response regulator receiver domain CEQ20_08680 PF00486 Transcriptional regulatory protein, C terminal CEQ20_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_08685 PF08918 PhoQ Sensor CEQ20_08690 PF08007 Cupin superfamily protein CEQ20_08700 PF01546 Peptidase family M20/M25/M40 CEQ20_08700 PF07687 Peptidase dimerisation domain CEQ20_08705 PF02146 Sir2 family CEQ20_08710 PF00480 ROK family CEQ20_08720 PF12704 MacB-like periplasmic core domain CEQ20_08720 PF02687 FtsX-like permease family CEQ20_08725 PF00005 ABC transporter CEQ20_08730 PF12704 MacB-like periplasmic core domain CEQ20_08730 PF02687 FtsX-like permease family CEQ20_08735 PF03461 TRCF domain CEQ20_08735 PF17757 UvrB interaction domain CEQ20_08735 PF02559 CarD-like/TRCF domain CEQ20_08735 PF00271 Helicase conserved C-terminal domain CEQ20_08735 PF00270 DEAD/DEAH box helicase CEQ20_08740 PF05433 Glycine zipper 2TM domain CEQ20_08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_08760 PF05728 Uncharacterised protein family (UPF0227) CEQ20_08765 PF00933 Glycosyl hydrolase family 3 N terminal domain CEQ20_08770 PF01636 Phosphotransferase enzyme family CEQ20_08775 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEQ20_08775 PF13036 Peptidoglycan-synthase activator LpoB CEQ20_08780 PF07233 Protein of unknown function (DUF1425) CEQ20_08785 PF01230 HIT domain CEQ20_08790 PF08501 Shikimate dehydrogenase substrate binding domain CEQ20_08795 PF02378 Phosphotransferase system, EIIC CEQ20_08795 PF00367 phosphotransferase system, EIIB CEQ20_08800 PF01026 TatD related DNase CEQ20_08805 PF09115 DNA polymerase III, delta subunit, C terminal CEQ20_08810 PF02223 Thymidylate kinase CEQ20_08815 PF02618 YceG-like family CEQ20_08820 PF01063 Amino-transferase class IV CEQ20_08825 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ20_08825 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ20_08830 PF00550 Phosphopantetheine attachment site CEQ20_08840 PF00698 Acyl transferase domain CEQ20_08845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEQ20_08845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEQ20_08850 PF02504 Fatty acid synthesis protein CEQ20_08855 PF01783 Ribosomal L32p protein family CEQ20_08860 PF02620 Large ribosomal RNA subunit accumulation protein YceD CEQ20_08865 PF02545 Maf-like protein CEQ20_08870 PF01479 S4 domain CEQ20_08870 PF00849 RNA pseudouridylate synthase CEQ20_08880 PF10150 Ribonuclease E/G family CEQ20_08880 PF00575 S1 RNA binding domain CEQ20_08880 PF12111 Polyribonucleotide phosphorylase C terminal CEQ20_08890 PF03992 Antibiotic biosynthesis monooxygenase CEQ20_08895 PF01979 Amidohydrolase family CEQ20_08900 PF06183 DinI-like family CEQ20_08910 PF13991 BssS protein family CEQ20_08915 PF01266 FAD dependent oxidoreductase CEQ20_08920 PF00196 Bacterial regulatory proteins, luxR family CEQ20_08930 PF01594 AI-2E family transporter CEQ20_08950 PF03279 Bacterial lipid A biosynthesis acyltransferase CEQ20_08955 PF00854 POT family CEQ20_08960 PF07119 Protein of unknown function (DUF1375) CEQ20_08965 PF00535 Glycosyl transferase family 2 CEQ20_08970 PF04349 Periplasmic glucan biosynthesis protein, MdoG CEQ20_08975 PF01757 Acyltransferase family CEQ20_08990 PF03471 Transporter associated domain CEQ20_08990 PF00999 Sodium/hydrogen exchanger family CEQ20_08990 PF02080 TrkA-C domain CEQ20_09000 PF00765 Autoinducer synthase CEQ20_09005 PF03472 Autoinducer binding domain CEQ20_09005 PF00196 Bacterial regulatory proteins, luxR family CEQ20_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_09010 PF03466 LysR substrate binding domain CEQ20_09020 PF00083 Sugar (and other) transporter CEQ20_09030 PF00248 Aldo/keto reductase family CEQ20_09035 PF09618 CRISPR-associated protein (Cas_Csy4) CEQ20_09040 PF09615 CRISPR-associated protein (Cas_Csy3) CEQ20_09045 PF09614 CRISPR-associated protein (Cas_Csy2) CEQ20_09050 PF09611 CRISPR-associated protein (Cas_Csy1) CEQ20_09060 PF01867 CRISPR associated protein Cas1 CEQ20_09065 PF00924 Mechanosensitive ion channel CEQ20_09090 PF04041 beta-1,4-mannooligosaccharide phosphorylase CEQ20_09095 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_09100 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_09110 PF00356 Bacterial regulatory proteins, lacI family CEQ20_09115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ20_09115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ20_09115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ20_09115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ20_09120 PF00005 ABC transporter CEQ20_09120 PF17912 MalK OB fold domain CEQ20_09130 PF05594 Haemagluttinin repeat CEQ20_09130 PF04829 Pre-toxin domain with VENN motif CEQ20_09130 PF05860 haemagglutination activity domain CEQ20_09130 PF13332 Hemagglutinin repeat CEQ20_09130 PF15526 Novel toxin 21 CEQ20_09150 PF18228 CdiI N-terminal domain CEQ20_09155 PF05860 haemagglutination activity domain CEQ20_09155 PF04829 Pre-toxin domain with VENN motif CEQ20_09155 PF15526 Novel toxin 21 CEQ20_09155 PF05594 Haemagluttinin repeat CEQ20_09155 PF13332 Hemagglutinin repeat CEQ20_09160 PF01381 Helix-turn-helix CEQ20_09170 PF01797 Transposase IS200 like CEQ20_09190 PF17287 POTRA domain CEQ20_09190 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEQ20_09190 PF08479 POTRA domain, ShlB-type CEQ20_09195 PF00970 Oxidoreductase FAD-binding domain CEQ20_09195 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_09195 PF00175 Oxidoreductase NAD-binding domain CEQ20_09200 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEQ20_09200 PF00355 Rieske [2Fe-2S] domain CEQ20_09205 PF02028 BCCT, betaine/carnitine/choline family transporter CEQ20_09215 PF00180 Isocitrate/isopropylmalate dehydrogenase CEQ20_09220 PF03466 LysR substrate binding domain CEQ20_09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_09225 PF00356 Bacterial regulatory proteins, lacI family CEQ20_09230 PF02653 Branched-chain amino acid transport system / permease component CEQ20_09235 PF00005 ABC transporter CEQ20_09240 PF13407 Periplasmic binding protein domain CEQ20_09245 PF00107 Zinc-binding dehydrogenase CEQ20_09245 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_09265 PF13505 Outer membrane protein beta-barrel domain CEQ20_09270 PF00892 EamA-like transporter family CEQ20_09280 PF13649 Methyltransferase domain CEQ20_09285 PF00210 Ferritin-like domain CEQ20_09295 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_09300 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_09305 PF00005 ABC transporter CEQ20_09310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_09310 PF08447 PAS fold CEQ20_09310 PF13426 PAS domain CEQ20_09325 PF05971 RNA methyltransferase CEQ20_09330 PF07338 Protein of unknown function (DUF1471) CEQ20_09340 PF02885 Glycosyl transferase family, helical bundle domain CEQ20_09345 PF00501 AMP-binding enzyme CEQ20_09345 PF13193 AMP-binding enzyme C-terminal domain CEQ20_09350 PF13378 Enolase C-terminal domain-like CEQ20_09355 PF00378 Enoyl-CoA hydratase/isomerase CEQ20_09360 PF12697 Alpha/beta hydrolase family CEQ20_09365 PF16582 Middle domain of thiamine pyrophosphate CEQ20_09365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_09365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_09370 PF00425 chorismate binding enzyme CEQ20_09380 PF05957 Bacterial protein of unknown function (DUF883) CEQ20_09395 PF00920 Dehydratase family CEQ20_09400 PF03928 Haem-degrading CEQ20_09405 PF07690 Major Facilitator Superfamily CEQ20_09415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_09415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_09420 PF00356 Bacterial regulatory proteins, lacI family CEQ20_09430 PF00106 short chain dehydrogenase CEQ20_09435 PF01202 Shikimate kinase CEQ20_09440 PF04074 YhcH/YjgK/YiaL CEQ20_09450 PF00361 Proton-conducting membrane transporter CEQ20_09455 PF00361 Proton-conducting membrane transporter CEQ20_09460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEQ20_09460 PF00361 Proton-conducting membrane transporter CEQ20_09465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEQ20_09470 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CEQ20_09475 PF12838 4Fe-4S dicluster domain CEQ20_09480 PF00146 NADH dehydrogenase CEQ20_09485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_09485 PF00384 Molybdopterin oxidoreductase CEQ20_09485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEQ20_09485 PF01568 Molydopterin dinucleotide binding domain CEQ20_09490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEQ20_09490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEQ20_09490 PF10531 SLBB domain CEQ20_09500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEQ20_09500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEQ20_09505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEQ20_09510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CEQ20_09515 PF03466 LysR substrate binding domain CEQ20_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_09520 PF00155 Aminotransferase class I and II CEQ20_09535 PF03600 Citrate transporter CEQ20_09535 PF02080 TrkA-C domain CEQ20_09540 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_09545 PF03887 YfbU domain CEQ20_09550 PF04217 Protein of unknown function, DUF412 CEQ20_09560 PF00871 Acetokinase family CEQ20_09565 PF07085 DRTGG domain CEQ20_09565 PF01515 Phosphate acetyl/butaryl transferase CEQ20_09570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ20_09570 PF00356 Bacterial regulatory proteins, lacI family CEQ20_09575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ20_09585 PF03611 PTS system sugar-specific permease component CEQ20_09590 PF00293 NUDIX domain CEQ20_09595 PF12850 Calcineurin-like phosphoesterase superfamily domain CEQ20_09605 PF01370 NAD dependent epimerase/dehydratase family CEQ20_09605 PF08338 Domain of unknown function (DUF1731) CEQ20_09610 PF00005 ABC transporter CEQ20_09615 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_09620 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_09625 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_09630 PF02441 Flavoprotein CEQ20_09635 PF00156 Phosphoribosyl transferase domain CEQ20_09640 PF02674 Colicin V production protein CEQ20_09645 PF05036 Sporulation related domain CEQ20_09650 PF02875 Mur ligase family, glutamate ligase domain CEQ20_09650 PF08245 Mur ligase middle domain CEQ20_09655 PF17848 Acetyl-coA carboxylase zinc finger domain CEQ20_09655 PF01039 Carboxyl transferase domain CEQ20_09660 PF09335 SNARE associated Golgi protein CEQ20_09665 PF01416 tRNA pseudouridine synthase CEQ20_09670 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ20_09670 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ20_09675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_09675 PF11890 Domain of unknown function (DUF3410) CEQ20_09675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_09685 PF00892 EamA-like transporter family CEQ20_09695 PF00419 Fimbrial protein CEQ20_09700 PF01177 Asp/Glu/Hydantoin racemase CEQ20_09705 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ20_09705 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ20_09710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEQ20_09710 PF01266 FAD dependent oxidoreductase CEQ20_09715 PF08891 YfcL protein CEQ20_09720 PF04315 Elongation factor P hydroxylase CEQ20_09725 PF01925 Sulfite exporter TauE/SafE CEQ20_09730 PF03411 Penicillin-insensitive murein endopeptidase CEQ20_09735 PF01264 Chorismate synthase CEQ20_09740 PF05175 Methyltransferase small domain CEQ20_09745 PF01713 Smr domain CEQ20_09750 PF00300 Histidine phosphatase superfamily (branch 1) CEQ20_09755 PF00378 Enoyl-CoA hydratase/isomerase CEQ20_09755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEQ20_09755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEQ20_09760 PF02803 Thiolase, C-terminal domain CEQ20_09760 PF00108 Thiolase, N-terminal domain CEQ20_09765 PF04175 Protein of unknown function (DUF406) CEQ20_09770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEQ20_09775 PF04333 MlaA lipoprotein CEQ20_09780 PF03918 Cytochrome C biogenesis protein CEQ20_09785 PF03918 Cytochrome C biogenesis protein CEQ20_09790 PF08534 Redoxin CEQ20_09795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEQ20_09795 PF01578 Cytochrome C assembly protein CEQ20_09800 PF03100 CcmE CEQ20_09805 PF04995 Heme exporter protein D (CcmD) CEQ20_09810 PF01578 Cytochrome C assembly protein CEQ20_09815 PF03379 CcmB protein CEQ20_09820 PF00005 ABC transporter CEQ20_09835 PF04011 LemA family CEQ20_09845 PF08274 PhnA Zinc-Ribbon CEQ20_09845 PF03831 PhnA domain CEQ20_09875 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_09920 PF13953 PapC C-terminal domain CEQ20_09920 PF13954 PapC N-terminal domain CEQ20_09920 PF00577 Outer membrane usher protein CEQ20_09925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_09925 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_09930 PF16970 Type-1 fimbrial protein, A CEQ20_09935 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_09935 PF07724 AAA domain (Cdc48 subfamily) CEQ20_09935 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_09935 PF17871 AAA lid domain CEQ20_09985 PF13406 Transglycosylase SLT domain CEQ20_09995 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10000 PF00005 ABC transporter CEQ20_10010 PF05638 Type VI secretion system effector, Hcp CEQ20_10020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_10020 PF01568 Molydopterin dinucleotide binding domain CEQ20_10020 PF00384 Molybdopterin oxidoreductase CEQ20_10025 PF12800 4Fe-4S binding domain CEQ20_10025 PF13247 4Fe-4S dicluster domain CEQ20_10030 PF04976 DMSO reductase anchor subunit (DmsC) CEQ20_10035 PF02613 Nitrate reductase delta subunit CEQ20_10045 PF05643 Putative bacterial lipoprotein (DUF799) CEQ20_10055 PF03783 Curli production assembly/transport component CsgG CEQ20_10065 PF01292 Prokaryotic cytochrome b561 CEQ20_10070 PF00155 Aminotransferase class I and II CEQ20_10075 PF07350 Protein of unknown function (DUF1479) CEQ20_10080 PF02685 Glucokinase CEQ20_10090 PF03466 LysR substrate binding domain CEQ20_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_10095 PF00248 Aldo/keto reductase family CEQ20_10105 PF01566 Natural resistance-associated macrophage protein CEQ20_10145 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ20_10170 PF12843 Putative quorum-sensing-regulated virulence factor CEQ20_10175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CEQ20_10175 PF00533 BRCA1 C Terminus (BRCT) domain CEQ20_10175 PF03120 NAD-dependent DNA ligase OB-fold domain CEQ20_10175 PF01653 NAD-dependent DNA ligase adenylation domain CEQ20_10175 PF12826 Helix-hairpin-helix motif CEQ20_10180 PF04354 ZipA, C-terminal FtsZ-binding domain CEQ20_10190 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_10195 PF00381 PTS HPr component phosphorylation site CEQ20_10200 PF00391 PEP-utilising enzyme, mobile domain CEQ20_10200 PF05524 PEP-utilising enzyme, N-terminal CEQ20_10200 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ20_10205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEQ20_10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_10210 PF00672 HAMP domain CEQ20_10210 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_10210 PF16527 Two-component sensor protein CpxA, periplasmic domain CEQ20_10215 PF00486 Transcriptional regulatory protein, C terminal CEQ20_10215 PF00072 Response regulator receiver domain CEQ20_10220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_10225 PF00005 ABC transporter CEQ20_10225 PF12704 MacB-like periplasmic core domain CEQ20_10225 PF02687 FtsX-like permease family CEQ20_10230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_10230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ20_10235 PF00474 Sodium:solute symporter family CEQ20_10245 PF00557 Metallopeptidase family M24 CEQ20_10250 PF00155 Aminotransferase class I and II CEQ20_10260 PF00672 HAMP domain CEQ20_10260 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_10265 PF00072 Response regulator receiver domain CEQ20_10265 PF00486 Transcriptional regulatory protein, C terminal CEQ20_10275 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_10280 PF00005 ABC transporter CEQ20_10285 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10290 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10300 PF01797 Transposase IS200 like CEQ20_10305 PF07690 Major Facilitator Superfamily CEQ20_10315 PF01380 SIS domain CEQ20_10315 PF01418 Helix-turn-helix domain, rpiR family CEQ20_10325 PF04074 YhcH/YjgK/YiaL CEQ20_10330 PF00480 ROK family CEQ20_10335 PF12468 Type III secretion system leucine rich repeat protein CEQ20_10340 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CEQ20_10345 PF00701 Dihydrodipicolinate synthetase family CEQ20_10350 PF04261 Dyp-type peroxidase family CEQ20_10355 PF06572 Protein of unknown function (DUF1131) CEQ20_10360 PF04076 Bacterial OB fold (BOF) protein CEQ20_10365 PF13018 Extended Signal Peptide of Type V secretion system CEQ20_10365 PF03797 Autotransporter beta-domain CEQ20_10365 PF16168 Adhesin of bacterial autotransporter system, probable stalk CEQ20_10365 PF03212 Pertactin CEQ20_10380 PF00583 Acetyltransferase (GNAT) family CEQ20_10385 PF01218 Coproporphyrinogen III oxidase CEQ20_10390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEQ20_10395 PF01515 Phosphate acetyl/butaryl transferase CEQ20_10395 PF00390 Malic enzyme, N-terminal domain CEQ20_10395 PF03949 Malic enzyme, NAD binding domain CEQ20_10400 PF00293 NUDIX domain CEQ20_10405 PF03264 NapC/NirT cytochrome c family, N-terminal region CEQ20_10410 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEQ20_10415 PF00384 Molybdopterin oxidoreductase CEQ20_10415 PF01568 Molydopterin dinucleotide binding domain CEQ20_10415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_10415 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEQ20_10420 PF03927 NapD protein CEQ20_10425 PF13187 4Fe-4S dicluster domain CEQ20_10425 PF12800 4Fe-4S binding domain CEQ20_10425 PF00037 4Fe-4S binding domain CEQ20_10430 PF00196 Bacterial regulatory proteins, luxR family CEQ20_10430 PF00072 Response regulator receiver domain CEQ20_10440 PF00873 AcrB/AcrD/AcrF family CEQ20_10450 PF04307 LexA-binding, inner membrane-associated putative hydrolase CEQ20_10460 PF13186 Iron-sulfur cluster-binding domain CEQ20_10460 PF04055 Radical SAM superfamily CEQ20_10465 PF00884 Sulfatase CEQ20_10475 PF00005 ABC transporter CEQ20_10475 PF08402 TOBE domain CEQ20_10480 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10495 PF03960 ArsC family CEQ20_10500 PF07687 Peptidase dimerisation domain CEQ20_10500 PF01546 Peptidase family M20/M25/M40 CEQ20_10505 PF02557 D-alanyl-D-alanine carboxypeptidase CEQ20_10510 PF13980 Uncharacterised protein family (UPF0370) CEQ20_10515 PF17176 tRNA-binding domain CEQ20_10515 PF05127 Helicase CEQ20_10515 PF13718 GNAT acetyltransferase 2 CEQ20_10515 PF08351 Domain of unknown function (DUF1726) CEQ20_10520 PF04284 Protein of unknown function (DUF441) CEQ20_10525 PF04228 Putative neutral zinc metallopeptidase CEQ20_10530 PF01259 SAICAR synthetase CEQ20_10535 PF06804 NlpB/DapX lipoprotein CEQ20_10540 PF00701 Dihydrodipicolinate synthetase family CEQ20_10545 PF01842 ACT domain CEQ20_10550 PF00578 AhpC/TSA family CEQ20_10565 PF01594 AI-2E family transporter CEQ20_10570 PF01435 Peptidase family M48 CEQ20_10570 PF07720 Tetratricopeptide repeat CEQ20_10575 PF03960 ArsC family CEQ20_10580 PF00308 Bacterial dnaA protein CEQ20_10585 PF00860 Permease family CEQ20_10595 PF00586 AIR synthase related protein, N-terminal domain CEQ20_10595 PF02769 AIR synthase related protein, C-terminal domain CEQ20_10600 PF00551 Formyl transferase CEQ20_10605 PF13302 Acetyltransferase (GNAT) domain CEQ20_10615 PF00005 ABC transporter CEQ20_10620 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10625 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10630 PF02503 Polyphosphate kinase middle domain CEQ20_10630 PF13090 Polyphosphate kinase C-terminal domain 2 CEQ20_10630 PF17941 Polyphosphate kinase C-terminal domain 1 CEQ20_10630 PF13089 Polyphosphate kinase N-terminal domain CEQ20_10635 PF02541 Ppx/GppA phosphatase family CEQ20_10645 PF03448 MgtE intracellular N domain CEQ20_10645 PF00571 CBS domain CEQ20_10645 PF01769 Divalent cation transporter CEQ20_10650 PF00012 Hsp70 protein CEQ20_10655 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10660 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_10670 PF00202 Aminotransferase class-III CEQ20_10675 PF00155 Aminotransferase class I and II CEQ20_10675 PF00392 Bacterial regulatory proteins, gntR family CEQ20_10680 PF00005 ABC transporter CEQ20_10680 PF08402 TOBE domain CEQ20_10685 PF13533 Biotin-lipoyl like CEQ20_10690 PF00873 AcrB/AcrD/AcrF family CEQ20_10695 PF00873 AcrB/AcrD/AcrF family CEQ20_10700 PF07690 Major Facilitator Superfamily CEQ20_10705 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_10705 PF00672 HAMP domain CEQ20_10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_10710 PF00072 Response regulator receiver domain CEQ20_10710 PF00486 Transcriptional regulatory protein, C terminal CEQ20_10715 PF07411 Domain of unknown function (DUF1508) CEQ20_10725 PF00781 Diacylglycerol kinase catalytic domain CEQ20_10745 PF08543 Phosphomethylpyrimidine kinase CEQ20_10765 PF18766 SWI2/SNF2 ATPase CEQ20_10765 PF12008 Type I restriction and modification enzyme - subunit R C terminal CEQ20_10765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ20_10790 PF12161 HsdM N-terminal domain CEQ20_10790 PF02384 N-6 DNA Methylase CEQ20_10825 PF02899 Phage integrase, N-terminal SAM-like domain CEQ20_10825 PF00589 Phage integrase family CEQ20_10830 PF04002 RadC-like JAB domain CEQ20_10855 PF13693 Winged helix-turn-helix DNA-binding CEQ20_10870 PF01580 FtsK/SpoIIIE family CEQ20_10870 PF09397 Ftsk gamma domain CEQ20_10870 PF17854 FtsK alpha domain CEQ20_10870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEQ20_10910 PF09134 Invasin, domain 3 CEQ20_10910 PF02369 Bacterial Ig-like domain (group 1) CEQ20_10910 PF11924 Inverse autotransporter, beta-domain CEQ20_10910 PF07979 Intimin C-type lectin domain CEQ20_10950 PF05638 Type VI secretion system effector, Hcp CEQ20_10955 PF00117 Glutamine amidotransferase class-I CEQ20_10955 PF02540 NAD synthase CEQ20_10955 PF00958 GMP synthase C terminal domain CEQ20_10960 PF00478 IMP dehydrogenase / GMP reductase domain CEQ20_10960 PF00571 CBS domain CEQ20_10965 PF13742 OB-fold nucleic acid binding domain CEQ20_10965 PF02601 Exonuclease VII, large subunit CEQ20_10970 PF07191 zinc-ribbons CEQ20_10980 PF01926 50S ribosome-binding GTPase CEQ20_10980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEQ20_10985 PF13360 PQQ-like domain CEQ20_10990 PF09976 Tetratricopeptide repeat-like domain CEQ20_10995 PF13393 Histidyl-tRNA synthetase CEQ20_10995 PF03129 Anticodon binding domain CEQ20_11000 PF04551 GcpE protein CEQ20_11005 PF13464 Domain of unknown function (DUF4115) CEQ20_11015 PF04055 Radical SAM superfamily CEQ20_11020 PF00334 Nucleoside diphosphate kinase CEQ20_11045 PF14581 SseB protein C-terminal domain CEQ20_11045 PF07179 SseB protein N-terminal domain CEQ20_11050 PF12404 Peptidase CEQ20_11050 PF00883 Cytosol aminopeptidase family, catalytic domain CEQ20_11055 PF04384 Iron-sulphur cluster assembly CEQ20_11060 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ20_11065 PF00012 Hsp70 protein CEQ20_11070 PF00226 DnaJ domain CEQ20_11070 PF07743 HSCB C-terminal oligomerisation domain CEQ20_11080 PF01521 Iron-sulphur cluster biosynthesis CEQ20_11085 PF01592 NifU-like N terminal domain CEQ20_11090 PF00266 Aminotransferase class-V CEQ20_11095 PF02082 Transcriptional regulator CEQ20_11100 PF00588 SpoU rRNA Methylase family CEQ20_11105 PF00459 Inositol monophosphatase family CEQ20_11110 PF03824 High-affinity nickel-transport protein CEQ20_11115 PF06226 Protein of unknown function (DUF1007) CEQ20_11120 PF00874 PRD domain CEQ20_11125 PF12832 MFS_1 like family CEQ20_11130 PF13505 Outer membrane protein beta-barrel domain CEQ20_11140 PF00464 Serine hydroxymethyltransferase CEQ20_11145 PF00970 Oxidoreductase FAD-binding domain CEQ20_11145 PF00042 Globin CEQ20_11145 PF00175 Oxidoreductase NAD-binding domain CEQ20_11150 PF14502 Helix-turn-helix domain CEQ20_11150 PF14503 YhfZ C-terminal domain CEQ20_11155 PF00543 Nitrogen regulatory protein P-II CEQ20_11160 PF00795 Carbon-nitrogen hydrolase CEQ20_11160 PF02540 NAD synthase CEQ20_11165 PF00158 Sigma-54 interaction domain CEQ20_11165 PF00072 Response regulator receiver domain CEQ20_11170 PF13942 YfhG lipoprotein CEQ20_11175 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_11195 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CEQ20_11195 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEQ20_11195 PF02769 AIR synthase related protein, C-terminal domain CEQ20_11200 PF01464 Transglycosylase SLT domain CEQ20_11200 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_11205 PF14437 MafB19-like deaminase CEQ20_11215 PF01380 SIS domain CEQ20_11220 PF01380 SIS domain CEQ20_11220 PF01418 Helix-turn-helix domain, rpiR family CEQ20_11295 PF06530 Phage antitermination protein Q CEQ20_11375 PF12838 4Fe-4S dicluster domain CEQ20_11380 PF01648 4'-phosphopantetheinyl transferase superfamily CEQ20_11385 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEQ20_11390 PF02565 Recombination protein O C terminal CEQ20_11390 PF11967 Recombination protein O N terminal CEQ20_11395 PF01926 50S ribosome-binding GTPase CEQ20_11395 PF07650 KH domain CEQ20_11400 PF00035 Double-stranded RNA binding motif CEQ20_11400 PF14622 Ribonuclease-III-like CEQ20_11405 PF10502 Signal peptidase, peptidase S26 CEQ20_11410 PF06421 GTP-binding protein LepA C-terminus CEQ20_11410 PF03144 Elongation factor Tu domain 2 CEQ20_11410 PF00679 Elongation factor G C-terminus CEQ20_11410 PF00009 Elongation factor Tu GTP binding domain CEQ20_11425 PF17188 MucB/RseB C-terminal domain CEQ20_11425 PF03888 MucB/RseB N-terminal domain CEQ20_11430 PF03872 Anti sigma-E protein RseA, N-terminal domain CEQ20_11430 PF03873 Anti sigma-E protein RseA, C-terminal domain CEQ20_11435 PF08281 Sigma-70, region 4 CEQ20_11435 PF04542 Sigma-70 region 2 CEQ20_11440 PF00890 FAD binding domain CEQ20_11440 PF02910 Fumarate reductase flavoprotein C-term CEQ20_11445 PF05175 Methyltransferase small domain CEQ20_11450 PF00271 Helicase conserved C-terminal domain CEQ20_11450 PF00270 DEAD/DEAH box helicase CEQ20_11455 PF12796 Ankyrin repeats (3 copies) CEQ20_11465 PF01228 Glycine radical CEQ20_11475 PF03167 Uracil DNA glycosylase superfamily CEQ20_11480 PF01470 Pyroglutamyl peptidase CEQ20_11495 PF03746 LamB/YcsF family CEQ20_11500 PF02626 Carboxyltransferase domain, subdomain A and B CEQ20_11505 PF02682 Carboxyltransferase domain, subdomain C and D CEQ20_11510 PF01784 NIF3 (NGG1p interacting factor 3) CEQ20_11515 PF02112 cAMP phosphodiesterases class-II CEQ20_11520 PF00875 DNA photolyase CEQ20_11520 PF03441 FAD binding domain of DNA photolyase CEQ20_11525 PF08349 Protein of unknown function (DUF1722) CEQ20_11535 PF10725 Protein of unknown function (DUF2517) CEQ20_11550 PF03814 Potassium-transporting ATPase A subunit CEQ20_11560 PF02669 K+-transporting ATPase, c chain CEQ20_11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_11565 PF13492 GAF domain CEQ20_11565 PF13493 Domain of unknown function (DUF4118) CEQ20_11565 PF02702 Osmosensitive K+ channel His kinase sensor domain CEQ20_11565 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_11570 PF00072 Response regulator receiver domain CEQ20_11570 PF00486 Transcriptional regulatory protein, C terminal CEQ20_11585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ20_11585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ20_11585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ20_11585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ20_11590 PF03925 SeqA protein C-terminal domain CEQ20_11590 PF17206 SeqA protein N-terminal domain CEQ20_11610 PF04794 YdjC-like protein CEQ20_11615 PF07883 Cupin domain CEQ20_11615 PF12833 Helix-turn-helix domain CEQ20_11620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CEQ20_11625 PF02378 Phosphotransferase system, EIIC CEQ20_11630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ20_11640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEQ20_11645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEQ20_11650 PF02254 TrkA-N domain CEQ20_11650 PF07885 Ion channel CEQ20_11660 PF06411 HdeA/HdeB family CEQ20_11665 PF03824 High-affinity nickel-transport protein CEQ20_11670 PF03253 Urea transporter CEQ20_11675 PF01774 UreD urease accessory protein CEQ20_11680 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEQ20_11685 PF01730 UreF CEQ20_11690 PF05194 UreE urease accessory protein, C-terminal domain CEQ20_11690 PF02814 UreE urease accessory protein, N-terminal domain CEQ20_11695 PF01979 Amidohydrolase family CEQ20_11695 PF00449 Urease alpha-subunit, N-terminal domain CEQ20_11700 PF00699 Urease beta subunit CEQ20_11705 PF00547 Urease, gamma subunit CEQ20_11710 PF00005 ABC transporter CEQ20_11715 PF00005 ABC transporter CEQ20_11720 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_11720 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_11725 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_11730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_11735 PF00313 'Cold-shock' DNA-binding domain CEQ20_11745 PF06711 Protein of unknown function (DUF1198) CEQ20_11750 PF09400 Protein of unknown function (DUF2002) CEQ20_11755 PF06392 Acid shock protein repeat CEQ20_11765 PF07972 NrdI Flavodoxin like CEQ20_11770 PF02867 Ribonucleotide reductase, barrel domain CEQ20_11770 PF08343 Ribonucleotide reductase N-terminal CEQ20_11770 PF00317 Ribonucleotide reductase, all-alpha domain CEQ20_11775 PF00268 Ribonucleotide reductase, small chain CEQ20_11780 PF00005 ABC transporter CEQ20_11780 PF00571 CBS domain CEQ20_11785 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_11790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEQ20_11800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CEQ20_11810 PF00929 Exonuclease CEQ20_11815 PF00075 RNase H CEQ20_11820 PF08241 Methyltransferase domain CEQ20_11825 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEQ20_11825 PF00753 Metallo-beta-lactamase superfamily CEQ20_11830 PF01476 LysM domain CEQ20_11830 PF01464 Transglycosylase SLT domain CEQ20_11835 PF03372 Endonuclease/Exonuclease/phosphatase family CEQ20_11855 PF00248 Aldo/keto reductase family CEQ20_11895 PF00005 ABC transporter CEQ20_11895 PF09383 NIL domain CEQ20_11900 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_11905 PF03180 NLPA lipoprotein CEQ20_11910 PF16358 RcsF lipoprotein CEQ20_11915 PF01980 tRNA-methyltransferase O CEQ20_11915 PF18389 TrmO C-terminal domain CEQ20_11920 PF03129 Anticodon binding domain CEQ20_11920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ20_11920 PF04073 Aminoacyl-tRNA editing domain CEQ20_11925 PF04170 NlpE N-terminal domain CEQ20_11925 PF17185 NlpE C-terminal OB domain CEQ20_11930 PF00472 RF-1 domain CEQ20_11935 PF07152 YaeQ protein CEQ20_11940 PF06786 Uncharacterised protein family (UPF0253) CEQ20_11945 PF07073 Modulator of Rho-dependent transcription termination (ROF) CEQ20_11950 PF00034 Cytochrome c CEQ20_11955 PF09179 TilS substrate binding domain CEQ20_11955 PF11734 TilS substrate C-terminal domain CEQ20_11955 PF01171 PP-loop family CEQ20_11960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ20_11965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEQ20_11970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEQ20_11970 PF14579 Helix-hairpin-helix motif CEQ20_11970 PF02811 PHP domain CEQ20_11970 PF01336 OB-fold nucleic acid binding domain CEQ20_11970 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEQ20_11975 PF01351 Ribonuclease HII CEQ20_11980 PF02684 Lipid-A-disaccharide synthetase CEQ20_11985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEQ20_11985 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_11990 PF07977 FabA-like domain CEQ20_11995 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_11995 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEQ20_12000 PF03938 Outer membrane protein (OmpH-like) CEQ20_12005 PF01103 Surface antigen CEQ20_12005 PF07244 Surface antigen variable number repeat CEQ20_12010 PF17820 PDZ domain CEQ20_12010 PF02163 Peptidase family M50 CEQ20_12020 PF01255 Putative undecaprenyl diphosphate synthase CEQ20_12025 PF13288 DXP reductoisomerase C-terminal domain CEQ20_12025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEQ20_12025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEQ20_12035 PF01765 Ribosome recycling factor CEQ20_12040 PF00696 Amino acid kinase family CEQ20_12045 PF00889 Elongation factor TS CEQ20_12050 PF00318 Ribosomal protein S2 CEQ20_12055 PF00557 Metallopeptidase family M24 CEQ20_12060 PF01909 Nucleotidyltransferase domain CEQ20_12060 PF01966 HD domain CEQ20_12060 PF08335 GlnD PII-uridylyltransferase CEQ20_12060 PF01842 ACT domain CEQ20_12065 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_12065 PF14602 Hexapeptide repeat of succinyl-transferase CEQ20_12065 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CEQ20_12070 PF11944 Protein of unknown function (DUF3461) CEQ20_12075 PF00258 Flavodoxin CEQ20_12080 PF00849 RNA pseudouridylate synthase CEQ20_12085 PF04287 tRNA pseudouridine synthase C CEQ20_12090 PF07348 Syd protein (SUKH-2) CEQ20_12095 PF14489 QueF-like protein CEQ20_12095 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEQ20_12100 PF03641 Possible lysine decarboxylase CEQ20_12100 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CEQ20_12100 PF11892 Domain of unknown function (DUF3412) CEQ20_12110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEQ20_12110 PF01367 5'-3' exonuclease, C-terminal SAM fold CEQ20_12115 PF18125 RlmM ferredoxin-like domain CEQ20_12115 PF01728 FtsJ-like methyltransferase CEQ20_12120 PF04241 Protein of unknown function (DUF423) CEQ20_12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_12125 PF03466 LysR substrate binding domain CEQ20_12135 PF00266 Aminotransferase class-V CEQ20_12140 PF02657 Fe-S metabolism associated domain CEQ20_12145 PF00899 ThiF family CEQ20_12150 PF06725 3D domain CEQ20_12150 PF03562 MltA specific insert domain CEQ20_12170 PF01520 N-acetylmuramoyl-L-alanine amidase CEQ20_12170 PF11741 AMIN domain CEQ20_12175 PF00696 Amino acid kinase family CEQ20_12175 PF00583 Acetyltransferase (GNAT) family CEQ20_12180 PF13538 UvrD-like helicase C-terminal domain CEQ20_12185 PF12705 PD-(D/E)XK nuclease superfamily CEQ20_12185 PF00580 UvrD/REP helicase N-terminal domain CEQ20_12185 PF13361 UvrD-like helicase C-terminal domain CEQ20_12190 PF16187 Middle or third domain of peptidase_M16 CEQ20_12190 PF00675 Insulinase (Peptidase family M16) CEQ20_12190 PF05193 Peptidase M16 inactive domain CEQ20_12195 PF17946 RecC C-terminal domain CEQ20_12225 PF00303 Thymidylate synthase CEQ20_12230 PF01790 Prolipoprotein diacylglyceryl transferase CEQ20_12235 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ20_12235 PF05524 PEP-utilising enzyme, N-terminal CEQ20_12235 PF01590 GAF domain CEQ20_12235 PF00391 PEP-utilising enzyme, mobile domain CEQ20_12240 PF00293 NUDIX domain CEQ20_12255 PF02976 DNA mismatch repair enzyme MutH CEQ20_12260 PF00248 Aldo/keto reductase family CEQ20_12275 PF07690 Major Facilitator Superfamily CEQ20_12280 PF00501 AMP-binding enzyme CEQ20_12280 PF13193 AMP-binding enzyme C-terminal domain CEQ20_12280 PF01553 Acyltransferase CEQ20_12285 PF00384 Molybdopterin oxidoreductase CEQ20_12285 PF01568 Molydopterin dinucleotide binding domain CEQ20_12290 PF00356 Bacterial regulatory proteins, lacI family CEQ20_12295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEQ20_12295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEQ20_12300 PF03466 LysR substrate binding domain CEQ20_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_12305 PF07690 Major Facilitator Superfamily CEQ20_12310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_12310 PF03466 LysR substrate binding domain CEQ20_12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_12325 PF02203 Tar ligand binding domain homologue CEQ20_12325 PF00672 HAMP domain CEQ20_12345 PF01478 Type IV leader peptidase family CEQ20_12345 PF06750 Bacterial Peptidase A24 N-terminal domain CEQ20_12370 PF02501 Type II secretion system (T2SS), protein I CEQ20_12370 PF07963 Prokaryotic N-terminal methylation motif CEQ20_12380 PF08334 Type II secretion system (T2SS), protein G CEQ20_12380 PF07963 Prokaryotic N-terminal methylation motif CEQ20_12385 PF00482 Type II secretion system (T2SS), protein F CEQ20_12400 PF00263 Bacterial type II and III secretion system protein CEQ20_12400 PF03958 Bacterial type II/III secretion system short domain CEQ20_12415 PF00484 Carbonic anhydrase CEQ20_12440 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CEQ20_12440 PF02278 Polysaccharide lyase family 8, super-sandwich domain CEQ20_12440 PF09093 Lyase, catalytic CEQ20_12440 PF09092 Lyase, N terminal CEQ20_12445 PF00884 Sulfatase CEQ20_12450 PF08220 DeoR-like helix-turn-helix domain CEQ20_12450 PF00455 DeoR C terminal sensor domain CEQ20_12455 PF08013 Tagatose 6 phosphate kinase CEQ20_12460 PF01380 SIS domain CEQ20_12465 PF03830 PTS system sorbose subfamily IIB component CEQ20_12470 PF03609 PTS system sorbose-specific iic component CEQ20_12475 PF03613 PTS system mannose/fructose/sorbose family IID component CEQ20_12480 PF03610 PTS system fructose IIA component CEQ20_12485 PF01979 Amidohydrolase family CEQ20_12500 PF04055 Radical SAM superfamily CEQ20_12500 PF13186 Iron-sulfur cluster-binding domain CEQ20_12505 PF00884 Sulfatase CEQ20_12515 PF01116 Fructose-bisphosphate aldolase class-II CEQ20_12535 PF07690 Major Facilitator Superfamily CEQ20_12540 PF01055 Glycosyl hydrolases family 31 CEQ20_12540 PF13802 Galactose mutarotase-like CEQ20_12540 PF17137 Domain of unknown function (DUF5110) CEQ20_12540 PF16338 Domain of unknown function (DUF4968) CEQ20_12545 PF00356 Bacterial regulatory proteins, lacI family CEQ20_12550 PF02264 LamB porin CEQ20_12555 PF00367 phosphotransferase system, EIIB CEQ20_12555 PF02378 Phosphotransferase system, EIIC CEQ20_12560 PF02449 Beta-galactosidase CEQ20_12560 PF08533 Beta-galactosidase C-terminal domain CEQ20_12560 PF08532 Beta-galactosidase trimerisation domain CEQ20_12565 PF07745 Glycosyl hydrolase family 53 CEQ20_12570 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_12575 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_12580 PF13416 Bacterial extracellular solute-binding protein CEQ20_12585 PF17912 MalK OB fold domain CEQ20_12585 PF00005 ABC transporter CEQ20_12590 PF00005 ABC transporter CEQ20_12595 PF02653 Branched-chain amino acid transport system / permease component CEQ20_12600 PF13407 Periplasmic binding protein domain CEQ20_12610 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CEQ20_12615 PF03551 Transcriptional regulator PadR-like family CEQ20_12705 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CEQ20_12710 PF15723 Motility quorum-sensing regulator, toxin of MqsA CEQ20_12740 PF01336 OB-fold nucleic acid binding domain CEQ20_12740 PF00152 tRNA synthetases class II (D, K and N) CEQ20_12750 PF01368 DHH family CEQ20_12750 PF02272 DHHA1 domain CEQ20_12750 PF17768 RecJ OB domain CEQ20_12755 PF10411 Disulfide bond isomerase protein N-terminus CEQ20_12755 PF13098 Thioredoxin-like domain CEQ20_12760 PF00589 Phage integrase family CEQ20_12760 PF02899 Phage integrase, N-terminal SAM-like domain CEQ20_12765 PF00258 Flavodoxin CEQ20_12770 PF06123 Inner membrane protein CreD CEQ20_12775 PF00672 HAMP domain CEQ20_12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_12775 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_12780 PF00072 Response regulator receiver domain CEQ20_12780 PF00486 Transcriptional regulatory protein, C terminal CEQ20_12785 PF07254 Membrane-bound toxin component of toxin-antitoxin system CEQ20_12790 PF03937 Flavinator of succinate dehydrogenase CEQ20_12795 PF01571 Aminomethyltransferase folate-binding domain CEQ20_12805 PF03006 Haemolysin-III related CEQ20_12815 PF05662 Coiled stalk of trimeric autotransporter adhesin CEQ20_12815 PF13018 Extended Signal Peptide of Type V secretion system CEQ20_12815 PF05658 Head domain of trimeric autotransporter adhesin CEQ20_12815 PF03895 YadA-like membrane anchor domain CEQ20_12830 PF02347 Glycine cleavage system P-protein CEQ20_12835 PF01597 Glycine cleavage H-protein CEQ20_12840 PF01571 Aminomethyltransferase folate-binding domain CEQ20_12840 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEQ20_12850 PF01494 FAD binding domain CEQ20_12855 PF01494 FAD binding domain CEQ20_12860 PF05195 Aminopeptidase P, N-terminal domain CEQ20_12860 PF00557 Metallopeptidase family M24 CEQ20_12865 PF03695 Uncharacterised protein family (UPF0149) CEQ20_12875 PF05164 Cell division protein ZapA CEQ20_12885 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEQ20_12890 PF01842 ACT domain CEQ20_12890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_12890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_12895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEQ20_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_12900 PF03466 LysR substrate binding domain CEQ20_12905 PF04402 Protein of unknown function (DUF541) CEQ20_12910 PF01810 LysE type translocator CEQ20_12915 PF05552 Conserved TM helix CEQ20_12915 PF00924 Mechanosensitive ion channel CEQ20_12920 PF01116 Fructose-bisphosphate aldolase class-II CEQ20_12925 PF00162 Phosphoglycerate kinase CEQ20_12930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ20_12930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ20_12935 PF00456 Transketolase, thiamine diphosphate binding domain CEQ20_12935 PF02779 Transketolase, pyrimidine binding domain CEQ20_12935 PF02780 Transketolase, C-terminal domain CEQ20_12945 PF01435 Peptidase family M48 CEQ20_12955 PF00355 Rieske [2Fe-2S] domain CEQ20_12960 PF17944 Arginine decarboxylase C-terminal helical extension CEQ20_12960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEQ20_12960 PF17810 Arginine decarboxylase helical bundle domain CEQ20_12965 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEQ20_12965 PF02772 S-adenosylmethionine synthetase, central domain CEQ20_12965 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEQ20_12970 PF17283 SprT-like zinc ribbon domain CEQ20_12970 PF10263 SprT-like family CEQ20_12975 PF04231 Endonuclease I CEQ20_12985 PF04452 RNA methyltransferase CEQ20_12990 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEQ20_12990 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEQ20_12995 PF02622 Uncharacterized ACR, COG1678 CEQ20_13000 PF03652 Holliday junction resolvase CEQ20_13005 PF00795 Carbon-nitrogen hydrolase CEQ20_13010 PF04371 Porphyromonas-type peptidyl-arginine deiminase CEQ20_13015 PF00437 Type II/IV secretion system protein CEQ20_13020 PF01168 Alanine racemase, N-terminal domain CEQ20_13025 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEQ20_13025 PF03807 NADP oxidoreductase coenzyme F420-dependent CEQ20_13030 PF02325 YGGT family CEQ20_13035 PF02594 Uncharacterised ACR, YggU family COG1872 CEQ20_13040 PF01725 Ham1 family CEQ20_13045 PF06969 HemN C-terminal domain CEQ20_13045 PF04055 Radical SAM superfamily CEQ20_13055 PF11101 Protein of unknown function (DUF2884) CEQ20_13060 PF04960 Glutaminase CEQ20_13065 PF04320 Protein with unknown function (DUF469) CEQ20_13070 PF02390 Putative methyltransferase CEQ20_13075 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ20_13075 PF10576 Iron-sulfur binding domain of endonuclease III CEQ20_13075 PF00633 Helix-hairpin-helix motif CEQ20_13075 PF14815 NUDIX domain CEQ20_13080 PF04362 Bacterial Fe(2+) trafficking CEQ20_13085 PF01464 Transglycosylase SLT domain CEQ20_13085 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEQ20_13095 PF07715 TonB-dependent Receptor Plug Domain CEQ20_13105 PF02653 Branched-chain amino acid transport system / permease component CEQ20_13110 PF00005 ABC transporter CEQ20_13115 PF13407 Periplasmic binding protein domain CEQ20_13120 PF01276 Orn/Lys/Arg decarboxylase, major domain CEQ20_13120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEQ20_13120 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEQ20_13135 PF13356 Arm DNA-binding domain CEQ20_13135 PF00589 Phage integrase family CEQ20_13140 PF03695 Uncharacterised protein family (UPF0149) CEQ20_13140 PF02810 SEC-C motif CEQ20_13180 PF01797 Transposase IS200 like CEQ20_13190 PF12008 Type I restriction and modification enzyme - subunit R C terminal CEQ20_13190 PF18766 SWI2/SNF2 ATPase CEQ20_13190 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ20_13325 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_13325 PF07724 AAA domain (Cdc48 subfamily) CEQ20_13325 PF17871 AAA lid domain CEQ20_13325 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_13370 PF02517 CPBP intramembrane metalloprotease CEQ20_13375 PF00765 Autoinducer synthase CEQ20_13380 PF00196 Bacterial regulatory proteins, luxR family CEQ20_13380 PF03472 Autoinducer binding domain CEQ20_13405 PF04183 IucA / IucC family CEQ20_13405 PF06276 Ferric iron reductase FhuF-like transporter CEQ20_13415 PF06276 Ferric iron reductase FhuF-like transporter CEQ20_13415 PF04183 IucA / IucC family CEQ20_13420 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CEQ20_13425 PF00593 TonB dependent receptor CEQ20_13425 PF07715 TonB-dependent Receptor Plug Domain CEQ20_13440 PF00356 Bacterial regulatory proteins, lacI family CEQ20_13445 PF00939 Sodium:sulfate symporter transmembrane region CEQ20_13495 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_13500 PF12951 Passenger-associated-transport-repeat CEQ20_13505 PF12951 Passenger-associated-transport-repeat CEQ20_13510 PF02447 GntP family permease CEQ20_13525 PF00005 ABC transporter CEQ20_13525 PF00664 ABC transporter transmembrane region CEQ20_13530 PF00005 ABC transporter CEQ20_13530 PF04954 Siderophore-interacting protein CEQ20_13530 PF08021 Siderophore-interacting FAD-binding domain CEQ20_13530 PF00664 ABC transporter transmembrane region CEQ20_13540 PF00975 Thioesterase domain CEQ20_13555 PF00501 AMP-binding enzyme CEQ20_13555 PF08242 Methyltransferase domain CEQ20_13555 PF00550 Phosphopantetheine attachment site CEQ20_13555 PF00668 Condensation domain CEQ20_13560 PF00501 AMP-binding enzyme CEQ20_13560 PF08242 Methyltransferase domain CEQ20_13560 PF00550 Phosphopantetheine attachment site CEQ20_13560 PF00668 Condensation domain CEQ20_13565 PF00593 TonB dependent receptor CEQ20_13565 PF07715 TonB-dependent Receptor Plug Domain CEQ20_13570 PF01546 Peptidase family M20/M25/M40 CEQ20_13570 PF07687 Peptidase dimerisation domain CEQ20_13575 PF03806 AbgT putative transporter family CEQ20_13590 PF14496 C-terminal novel E3 ligase, LRR-interacting CEQ20_13590 PF12468 Type III secretion system leucine rich repeat protein CEQ20_13615 PF03797 Autotransporter beta-domain CEQ20_13625 PF07906 ShET2 enterotoxin, N-terminal region CEQ20_13630 PF00873 AcrB/AcrD/AcrF family CEQ20_13635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_13635 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_13645 PF13188 PAS domain CEQ20_13645 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_13645 PF03707 Bacterial signalling protein N terminal repeat CEQ20_13645 PF00563 EAL domain CEQ20_13660 PF05433 Glycine zipper 2TM domain CEQ20_13680 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEQ20_13680 PF00691 OmpA family CEQ20_13685 PF01618 MotA/TolQ/ExbB proton channel family CEQ20_13690 PF04542 Sigma-70 region 2 CEQ20_13690 PF04545 Sigma-70, region 4 CEQ20_13715 PF07196 Flagellin hook IN motif CEQ20_13715 PF02465 Flagellar hook-associated protein 2 N-terminus CEQ20_13715 PF07195 Flagellar hook-associated protein 2 C-terminus CEQ20_13720 PF00669 Bacterial flagellin N-terminal helical region CEQ20_13720 PF00700 Bacterial flagellin C-terminal helical region CEQ20_13725 PF00669 Bacterial flagellin N-terminal helical region CEQ20_13725 PF00700 Bacterial flagellin C-terminal helical region CEQ20_13725 PF07196 Flagellin hook IN motif CEQ20_13750 PF00460 Flagella basal body rod protein CEQ20_13750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_13760 PF02119 Flagellar P-ring protein CEQ20_13765 PF02107 Flagellar L-ring protein CEQ20_13770 PF00460 Flagella basal body rod protein CEQ20_13770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_13775 PF00460 Flagella basal body rod protein CEQ20_13775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_13780 PF00460 Flagella basal body rod protein CEQ20_13780 PF07559 Flagellar basal body protein FlaE CEQ20_13780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_13785 PF13861 FlgD Tudor-like domain CEQ20_13785 PF03963 Flagellar hook capping protein - N-terminal region CEQ20_13785 PF13860 FlgD Ig-like domain CEQ20_13790 PF00460 Flagella basal body rod protein CEQ20_13790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ20_13795 PF00460 Flagella basal body rod protein CEQ20_13800 PF13144 Chaperone for flagella basal body P-ring formation CEQ20_13820 PF18269 T3SS EscN ATPase C-terminal domain CEQ20_13820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_13835 PF08345 Flagellar M-ring protein C-terminal CEQ20_13835 PF01514 Secretory protein of YscJ/FliF family CEQ20_13840 PF02049 Flagellar hook-basal body complex protein FliE CEQ20_13845 PF00158 Sigma-54 interaction domain CEQ20_13845 PF02954 Bacterial regulatory protein, Fis family CEQ20_13845 PF00072 Response regulator receiver domain CEQ20_13855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ20_13860 PF00813 FliP family CEQ20_13865 PF01313 Bacterial export proteins, family 3 CEQ20_13870 PF01311 Bacterial export proteins, family 1 CEQ20_13875 PF01312 FlhB HrpN YscU SpaS Family CEQ20_13895 PF01497 Periplasmic binding protein CEQ20_13900 PF09222 Fimbrial adhesin F17-AG, lectin domain CEQ20_13900 PF00419 Fimbrial protein CEQ20_13905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_13905 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_13910 PF13954 PapC N-terminal domain CEQ20_13910 PF00577 Outer membrane usher protein CEQ20_13910 PF13953 PapC C-terminal domain CEQ20_13915 PF00419 Fimbrial protein CEQ20_13920 PF00704 Glycosyl hydrolases family 18 CEQ20_13925 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CEQ20_13925 PF18416 N-acetylglucosamine binding protein domain 2 CEQ20_13965 PF13629 Pilus formation protein N terminal region CEQ20_13965 PF00263 Bacterial type II and III secretion system protein CEQ20_13965 PF04972 BON domain CEQ20_13980 PF00437 Type II/IV secretion system protein CEQ20_14020 PF02472 Biopolymer transport protein ExbD/TolR CEQ20_14025 PF01618 MotA/TolQ/ExbB proton channel family CEQ20_14030 PF01053 Cys/Met metabolism PLP-dependent enzyme CEQ20_14035 PF09335 SNARE associated Golgi protein CEQ20_14040 PF12833 Helix-turn-helix domain CEQ20_14040 PF06719 AraC-type transcriptional regulator N-terminus CEQ20_14045 PF00465 Iron-containing alcohol dehydrogenase CEQ20_14055 PF00248 Aldo/keto reductase family CEQ20_14060 PF11842 Domain of unknown function (DUF3362) CEQ20_14060 PF04055 Radical SAM superfamily CEQ20_14060 PF08497 Radical SAM N-terminal CEQ20_14070 PF07732 Multicopper oxidase CEQ20_14070 PF07731 Multicopper oxidase CEQ20_14080 PF01553 Acyltransferase CEQ20_14085 PF00521 DNA gyrase/topoisomerase IV, subunit A CEQ20_14085 PF03989 DNA gyrase C-terminal domain, beta-propeller CEQ20_14095 PF02525 Flavodoxin-like fold CEQ20_14100 PF03466 LysR substrate binding domain CEQ20_14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_14105 PF01751 Toprim domain CEQ20_14105 PF00204 DNA gyrase B CEQ20_14105 PF00986 DNA gyrase B subunit, carboxyl terminus CEQ20_14110 PF05728 Uncharacterised protein family (UPF0227) CEQ20_14115 PF00149 Calcineurin-like phosphoesterase CEQ20_14120 PF06853 Protein of unknown function (DUF1249) CEQ20_14125 PF00293 NUDIX domain CEQ20_14130 PF02321 Outer membrane efflux protein CEQ20_14140 PF06693 Protein of unknown function (DUF1190) CEQ20_14145 PF03738 Glutathionylspermidine synthase preATP-grasp CEQ20_14150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEQ20_14155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEQ20_14160 PF04380 Membrane fusogenic activity CEQ20_14170 PF13520 Amino acid permease CEQ20_14175 PF01467 Cytidylyltransferase-like CEQ20_14175 PF00294 pfkB family carbohydrate kinase CEQ20_14180 PF08335 GlnD PII-uridylyltransferase CEQ20_14180 PF03710 Glutamate-ammonia ligase adenylyltransferase CEQ20_14185 PF01928 CYTH domain CEQ20_14190 PF08239 Bacterial SH3 domain CEQ20_14195 PF01743 Poly A polymerase head domain CEQ20_14195 PF01966 HD domain CEQ20_14195 PF12627 Probable RNA and SrmB- binding site of polymerase A CEQ20_14200 PF02673 Bacitracin resistance protein BacA CEQ20_14205 PF02152 Dihydroneopterin aldolase CEQ20_14210 PF02660 Glycerol-3-phosphate acyltransferase CEQ20_14215 PF00814 Glycoprotease family CEQ20_14220 PF01165 Ribosomal protein S21 CEQ20_14225 PF01807 CHC2 zinc finger CEQ20_14225 PF08275 DNA primase catalytic core, N-terminal domain CEQ20_14225 PF08278 DNA primase DnaG DnaB-binding CEQ20_14225 PF10410 DnaB-helicase binding domain of primase CEQ20_14230 PF04545 Sigma-70, region 4 CEQ20_14230 PF00140 Sigma-70 factor, region 1.2 CEQ20_14230 PF03979 Sigma-70 factor, region 1.1 CEQ20_14230 PF04546 Sigma-70, non-essential region CEQ20_14230 PF04539 Sigma-70 region 3 CEQ20_14230 PF04542 Sigma-70 region 2 CEQ20_14260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_14260 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_14265 PF04632 Fusaric acid resistance protein family CEQ20_14275 PF14310 Fibronectin type III-like domain CEQ20_14275 PF01915 Glycosyl hydrolase family 3 C-terminal domain CEQ20_14275 PF00933 Glycosyl hydrolase family 3 N terminal domain CEQ20_14285 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_14290 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_14295 PF13416 Bacterial extracellular solute-binding protein CEQ20_14300 PF00356 Bacterial regulatory proteins, lacI family CEQ20_14305 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CEQ20_14310 PF00005 ABC transporter CEQ20_14310 PF03459 TOBE domain CEQ20_14310 PF17912 MalK OB fold domain CEQ20_14345 PF07262 CDI immunity protein CEQ20_14365 PF13332 Hemagglutinin repeat CEQ20_14365 PF05860 haemagglutination activity domain CEQ20_14365 PF13018 Extended Signal Peptide of Type V secretion system CEQ20_14365 PF04829 Pre-toxin domain with VENN motif CEQ20_14370 PF05860 haemagglutination activity domain CEQ20_14370 PF13018 Extended Signal Peptide of Type V secretion system CEQ20_14370 PF13332 Hemagglutinin repeat CEQ20_14370 PF04829 Pre-toxin domain with VENN motif CEQ20_14375 PF08479 POTRA domain, ShlB-type CEQ20_14375 PF17287 POTRA domain CEQ20_14375 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEQ20_14410 PF03729 Short repeat of unknown function (DUF308) CEQ20_14415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEQ20_14415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_14420 PF05175 Methyltransferase small domain CEQ20_14425 PF03797 Autotransporter beta-domain CEQ20_14430 PF01863 Protein of unknown function DUF45 CEQ20_14435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_14440 PF00375 Sodium:dicarboxylate symporter family CEQ20_14445 PF10688 Bacterial inner membrane protein CEQ20_14450 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CEQ20_14450 PF08666 SAF domain CEQ20_14455 PF01232 Mannitol dehydrogenase Rossmann domain CEQ20_14455 PF08125 Mannitol dehydrogenase C-terminal domain CEQ20_14460 PF02614 Glucuronate isomerase CEQ20_14465 PF07690 Major Facilitator Superfamily CEQ20_14470 PF07729 FCD domain CEQ20_14470 PF00392 Bacterial regulatory proteins, gntR family CEQ20_14480 PF09335 SNARE associated Golgi protein CEQ20_14485 PF13721 SecD export protein N-terminal TM region CEQ20_14500 PF05957 Bacterial protein of unknown function (DUF883) CEQ20_14505 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CEQ20_14515 PF07681 DoxX CEQ20_14525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_14525 PF03466 LysR substrate binding domain CEQ20_14530 PF17954 Quercetinase C-terminal cupin domain CEQ20_14530 PF02678 Pirin CEQ20_14540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ20_14545 PF04348 LppC putative lipoprotein CEQ20_14550 PF02021 Uncharacterised protein family UPF0102 CEQ20_14555 PF13580 SIS domain CEQ20_14560 PF04972 BON domain CEQ20_14565 PF00912 Transglycosylase CEQ20_14580 PF00989 PAS fold CEQ20_14580 PF00072 Response regulator receiver domain CEQ20_14580 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEQ20_14580 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_14580 PF01627 Hpt domain CEQ20_14590 PF04055 Radical SAM superfamily CEQ20_14590 PF16199 Radical_SAM C-terminal domain CEQ20_14595 PF00310 Glutamine amidotransferases class-II CEQ20_14595 PF04898 Glutamate synthase central domain CEQ20_14595 PF01645 Conserved region in glutamate synthase CEQ20_14595 PF01493 GXGXG motif CEQ20_14600 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_14600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEQ20_14610 PF04386 Stringent starvation protein B CEQ20_14615 PF02798 Glutathione S-transferase, N-terminal domain CEQ20_14615 PF00043 Glutathione S-transferase, C-terminal domain CEQ20_14625 PF00380 Ribosomal protein S9/S16 CEQ20_14630 PF00572 Ribosomal protein L13 CEQ20_14635 PF03969 AFG1-like ATPase CEQ20_14640 PF06295 Protein of unknown function (DUF1043) CEQ20_14645 PF13180 PDZ domain CEQ20_14645 PF00595 PDZ domain CEQ20_14650 PF13180 PDZ domain CEQ20_14655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEQ20_14660 PF01722 BolA-like protein CEQ20_14665 PF13466 STAS domain CEQ20_14670 PF05494 MlaC protein CEQ20_14675 PF02470 MlaD protein CEQ20_14680 PF02405 Permease MlaE CEQ20_14685 PF00005 ABC transporter CEQ20_14690 PF01699 Sodium/calcium exchanger protein CEQ20_14695 PF00571 CBS domain CEQ20_14695 PF01380 SIS domain CEQ20_14705 PF06835 Lipopolysaccharide-assembly, LptC-related CEQ20_14710 PF03968 OstA-like protein CEQ20_14715 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEQ20_14715 PF00005 ABC transporter CEQ20_14720 PF00309 Sigma-54 factor, Activator interacting domain (AID) CEQ20_14720 PF04963 Sigma-54 factor, core binding domain CEQ20_14720 PF04552 Sigma-54, DNA binding domain CEQ20_14725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEQ20_14730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ20_14740 PF03668 P-loop ATPase protein family CEQ20_14745 PF00381 PTS HPr component phosphorylation site CEQ20_14755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ20_14755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ20_14760 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEQ20_14760 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEQ20_14765 PF01042 Endoribonuclease L-PSP CEQ20_14775 PF00356 Bacterial regulatory proteins, lacI family CEQ20_14780 PF00367 phosphotransferase system, EIIB CEQ20_14780 PF02378 Phosphotransferase system, EIIC CEQ20_14785 PF00128 Alpha amylase, catalytic domain CEQ20_14785 PF11941 Domain of unknown function (DUF3459) CEQ20_14790 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ20_14790 PF14760 Rnk N-terminus CEQ20_14795 PF07361 Cytochrome b562 CEQ20_14810 PF01523 Putative modulator of DNA gyrase CEQ20_14815 PF04751 Protein of unknown function (DUF615) CEQ20_14820 PF01337 Barstar (barnase inhibitor) CEQ20_14830 PF00171 Aldehyde dehydrogenase family CEQ20_14835 PF04632 Fusaric acid resistance protein family CEQ20_14840 PF13533 Biotin-lipoyl like CEQ20_14845 PF07869 Protein of unknown function (DUF1656) CEQ20_14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_14850 PF03466 LysR substrate binding domain CEQ20_14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_14855 PF03466 LysR substrate binding domain CEQ20_14870 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain CEQ20_14870 PF18413 Neuraminidase-like domain CEQ20_14875 PF12255 Insecticide toxin TcdB middle/C-terminal region CEQ20_14875 PF03534 Salmonella virulence plasmid 65kDa B protein CEQ20_14875 PF12256 Insecticide toxin TcdB middle/N-terminal region CEQ20_14900 PF01523 Putative modulator of DNA gyrase CEQ20_14905 PF00795 Carbon-nitrogen hydrolase CEQ20_14910 PF13116 Protein of unknown function CEQ20_14910 PF13502 AsmA-like C-terminal region CEQ20_14915 PF10150 Ribonuclease E/G family CEQ20_14915 PF00575 S1 RNA binding domain CEQ20_14920 PF02545 Maf-like protein CEQ20_14925 PF04093 rod shape-determining protein MreD CEQ20_14930 PF04085 rod shape-determining protein MreC CEQ20_14940 PF17157 Gammaproteobacterial periplasmic sensor domain CEQ20_14940 PF00563 EAL domain CEQ20_14940 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_14945 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_14945 PF00107 Zinc-binding dehydrogenase CEQ20_14950 PF00174 Oxidoreductase molybdopterin binding domain CEQ20_14955 PF01794 Ferric reductase like transmembrane component CEQ20_14960 PF01220 Dehydroquinase class II CEQ20_14965 PF00364 Biotin-requiring enzyme CEQ20_14970 PF02785 Biotin carboxylase C-terminal domain CEQ20_14970 PF00289 Biotin carboxylase, N-terminal domain CEQ20_14970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEQ20_14975 PF06196 Protein of unknown function (DUF997) CEQ20_14980 PF00474 Sodium:solute symporter family CEQ20_14990 PF01207 Dihydrouridine synthase (Dus) CEQ20_14995 PF02954 Bacterial regulatory protein, Fis family CEQ20_15080 PF00892 EamA-like transporter family CEQ20_15085 PF01016 Ribosomal L27 protein CEQ20_15090 PF00829 Ribosomal prokaryotic L21 protein CEQ20_15095 PF00348 Polyprenyl synthetase CEQ20_15105 PF13693 Winged helix-turn-helix DNA-binding CEQ20_15115 PF00056 lactate/malate dehydrogenase, NAD binding domain CEQ20_15115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEQ20_15120 PF02863 Arginine repressor, C-terminal domain CEQ20_15120 PF01316 Arginine repressor, DNA binding domain CEQ20_15130 PF02875 Mur ligase family, glutamate ligase domain CEQ20_15130 PF01225 Mur ligase family, catalytic domain CEQ20_15130 PF08245 Mur ligase middle domain CEQ20_15135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEQ20_15140 PF00719 Inorganic pyrophosphatase CEQ20_15145 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CEQ20_15150 PF04357 TamB, inner membrane protein subunit of TAM complex CEQ20_15155 PF07244 Surface antigen variable number repeat CEQ20_15155 PF01103 Surface antigen CEQ20_15155 PF17243 POTRA domain TamA domain 1 CEQ20_15160 PF01625 Peptide methionine sulfoxide reductase CEQ20_15165 PF01595 Cyclin M transmembrane N-terminal domain CEQ20_15165 PF03471 Transporter associated domain CEQ20_15165 PF00571 CBS domain CEQ20_15175 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CEQ20_15180 PF00459 Inositol monophosphatase family CEQ20_15185 PF02872 5'-nucleotidase, C-terminal domain CEQ20_15185 PF00149 Calcineurin-like phosphoesterase CEQ20_15190 PF04405 Domain of Unknown function (DUF542) CEQ20_15190 PF01814 Hemerythrin HHE cation binding domain CEQ20_15195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEQ20_15195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ20_15200 PF04225 Opacity-associated protein A LysM-like domain CEQ20_15200 PF08525 Opacity-associated protein A N-terminal motif CEQ20_15210 PF01281 Ribosomal protein L9, N-terminal domain CEQ20_15210 PF03948 Ribosomal protein L9, C-terminal domain CEQ20_15215 PF01084 Ribosomal protein S18 CEQ20_15220 PF00436 Single-strand binding protein family CEQ20_15225 PF01250 Ribosomal protein S6 CEQ20_15235 PF00326 Prolyl oligopeptidase family CEQ20_15240 PF07338 Protein of unknown function (DUF1471) CEQ20_15245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEQ20_15245 PF18158 Adaptive response protein AidB N-terminal domain CEQ20_15245 PF02770 Acyl-CoA dehydrogenase, middle domain CEQ20_15250 PF00588 SpoU rRNA Methylase family CEQ20_15250 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEQ20_15255 PF00575 S1 RNA binding domain CEQ20_15255 PF08461 Ribonuclease R winged-helix domain CEQ20_15255 PF08206 Ribonuclease B OB domain CEQ20_15255 PF17876 Cold shock domain CEQ20_15255 PF00773 RNB domain CEQ20_15260 PF02082 Transcriptional regulator CEQ20_15265 PF00709 Adenylosuccinate synthetase CEQ20_15270 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CEQ20_15275 PF01145 SPFH domain / Band 7 family CEQ20_15280 PF12221 Bacterial membrane protein N terminal CEQ20_15280 PF01145 SPFH domain / Band 7 family CEQ20_15285 PF16360 GTP-binding GTPase Middle Region CEQ20_15285 PF13167 GTP-binding GTPase N-terminal CEQ20_15285 PF01926 50S ribosome-binding GTPase CEQ20_15290 PF17209 Hfq protein CEQ20_15300 PF01119 DNA mismatch repair protein, C-terminal domain CEQ20_15300 PF08676 MutL C terminal dimerisation domain CEQ20_15305 PF01520 N-acetylmuramoyl-L-alanine amidase CEQ20_15310 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEQ20_15315 PF03853 YjeF-related protein N-terminus CEQ20_15315 PF01256 Carbohydrate kinase CEQ20_15320 PF08331 Domain of unknown function (DUF1730) CEQ20_15345 PF00929 Exonuclease CEQ20_15355 PF03193 RsgA GTPase CEQ20_15360 PF02666 Phosphatidylserine decarboxylase CEQ20_15365 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEQ20_15365 PF12795 Mechanosensitive ion channel porin domain CEQ20_15365 PF00924 Mechanosensitive ion channel CEQ20_15370 PF00152 tRNA synthetases class II (D, K and N) CEQ20_15380 PF00890 FAD binding domain CEQ20_15380 PF02910 Fumarate reductase flavoprotein C-term CEQ20_15385 PF13183 4Fe-4S dicluster domain CEQ20_15385 PF13085 2Fe-2S iron-sulfur cluster binding domain CEQ20_15390 PF02300 Fumarate reductase subunit C CEQ20_15395 PF02313 Fumarate reductase subunit D CEQ20_15400 PF00893 Small Multidrug Resistance protein CEQ20_15405 PF01132 Elongation factor P (EF-P) OB domain CEQ20_15405 PF09285 Elongation factor P, C-terminal CEQ20_15405 PF08207 Elongation factor P (EF-P) KOW-like domain CEQ20_15410 PF04055 Radical SAM superfamily CEQ20_15415 PF13698 Domain of unknown function (DUF4156) CEQ20_15425 PF00118 TCP-1/cpn60 chaperonin family CEQ20_15430 PF00166 Chaperonin 10 Kd subunit CEQ20_15435 PF04186 FxsA cytoplasmic membrane protein CEQ20_15440 PF10415 Fumarase C C-terminus CEQ20_15440 PF00206 Lyase CEQ20_15445 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEQ20_15450 PF03091 CutA1 divalent ion tolerance protein CEQ20_15455 PF02683 Cytochrome C biogenesis protein transmembrane region CEQ20_15455 PF11412 Disulphide bond corrector protein DsbC CEQ20_15460 PF00384 Molybdopterin oxidoreductase CEQ20_15460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_15460 PF01568 Molydopterin dinucleotide binding domain CEQ20_15465 PF12800 4Fe-4S binding domain CEQ20_15465 PF13247 4Fe-4S dicluster domain CEQ20_15470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEQ20_15470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_15470 PF13247 4Fe-4S dicluster domain CEQ20_15490 PF00589 Phage integrase family CEQ20_15490 PF02899 Phage integrase, N-terminal SAM-like domain CEQ20_15535 PF05593 RHS Repeat CEQ20_15535 PF03527 RHS protein CEQ20_15605 PF13289 SIR2-like domain CEQ20_15625 PF01548 Transposase CEQ20_15625 PF02371 Transposase IS116/IS110/IS902 family CEQ20_15635 PF00271 Helicase conserved C-terminal domain CEQ20_15635 PF08494 DEAD/H associated CEQ20_15635 PF00270 DEAD/DEAH box helicase CEQ20_15755 PF04754 Putative transposase, YhgA-like CEQ20_15760 PF04917 Bacterial shufflon protein, N-terminal constant region CEQ20_15780 PF00437 Type II/IV secretion system protein CEQ20_15855 PF03796 DnaB-like helicase C terminal domain CEQ20_15855 PF00772 DnaB-like helicase N terminal domain CEQ20_15865 PF13356 Arm DNA-binding domain CEQ20_15865 PF00589 Phage integrase family CEQ20_15865 PF14659 Phage integrase, N-terminal SAM-like domain CEQ20_15910 PF06932 Protein of unknown function (DUF1283) CEQ20_15980 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_15980 PF17871 AAA lid domain CEQ20_15980 PF07724 AAA domain (Cdc48 subfamily) CEQ20_15980 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_15990 PF05736 OprF membrane domain CEQ20_15990 PF00691 OmpA family CEQ20_16030 PF04391 Protein of unknown function (DUF533) CEQ20_16060 PF12602 Fertility inhibition protein N terminal CEQ20_16060 PF04352 ProQ/FINO family CEQ20_16160 PF01926 50S ribosome-binding GTPase CEQ20_16165 PF06067 Domain of unknown function (DUF932) CEQ20_16175 PF03230 Antirestriction protein CEQ20_16180 PF04002 RadC-like JAB domain CEQ20_16190 PF06755 CbtA_toxin of type IV toxin-antitoxin system CEQ20_16195 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CEQ20_16240 PF06379 L-rhamnose-proton symport protein (RhaT) CEQ20_16245 PF12833 Helix-turn-helix domain CEQ20_16245 PF02311 AraC-like ligand binding domain CEQ20_16250 PF02311 AraC-like ligand binding domain CEQ20_16250 PF12833 Helix-turn-helix domain CEQ20_16260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_16260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_16265 PF06134 L-rhamnose isomerase (RhaA) CEQ20_16270 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ20_16275 PF00465 Iron-containing alcohol dehydrogenase CEQ20_16280 PF05336 L-rhamnose mutarotase CEQ20_16285 PF00436 Single-strand binding protein family CEQ20_16295 PF00005 ABC transporter CEQ20_16295 PF17755 UvrA DNA-binding domain CEQ20_16295 PF17760 UvrA interaction domain CEQ20_16300 PF04237 YjbR CEQ20_16305 PF00155 Aminotransferase class I and II CEQ20_16310 PF00842 Alanine racemase, C-terminal domain CEQ20_16310 PF01168 Alanine racemase, N-terminal domain CEQ20_16315 PF00772 DnaB-like helicase N terminal domain CEQ20_16315 PF03796 DnaB-like helicase C terminal domain CEQ20_16320 PF00107 Zinc-binding dehydrogenase CEQ20_16320 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_16330 PF09583 Phage shock protein G (Phageshock_PspG) CEQ20_16335 PF01207 Dihydrouridine synthase (Dus) CEQ20_16340 PF01475 Ferric uptake regulator family CEQ20_16345 PF00717 Peptidase S24-like CEQ20_16345 PF01726 LexA DNA binding domain CEQ20_16350 PF01219 Prokaryotic diacylglycerol kinase CEQ20_16355 PF01553 Acyltransferase CEQ20_16360 PF01040 UbiA prenyltransferase family CEQ20_16365 PF04345 Chorismate lyase CEQ20_16370 PF12951 Passenger-associated-transport-repeat CEQ20_16375 PF01565 FAD binding domain CEQ20_16375 PF08031 Berberine and berberine like CEQ20_16405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_16410 PF00577 Outer membrane usher protein CEQ20_16410 PF13954 PapC N-terminal domain CEQ20_16410 PF13953 PapC C-terminal domain CEQ20_16420 PF02342 TerD domain CEQ20_16425 PF02342 TerD domain CEQ20_16430 PF03741 Integral membrane protein TerC family CEQ20_16435 PF05099 Tellurite resistance protein TerB CEQ20_16440 PF02342 TerD domain CEQ20_16445 PF02342 TerD domain CEQ20_16465 PF11202 Phosphoribosyl transferase (PRTase) CEQ20_16465 PF15608 PELOTA RNA binding domain CEQ20_16485 PF04055 Radical SAM superfamily CEQ20_16490 PF06228 Haem utilisation ChuX/HutX CEQ20_16495 PF13460 NAD(P)H-binding CEQ20_16500 PF10636 Hemin uptake protein hemP CEQ20_16505 PF00593 TonB dependent receptor CEQ20_16505 PF07715 TonB-dependent Receptor Plug Domain CEQ20_16510 PF05171 Haemin-degrading HemS.ChuX domain CEQ20_16515 PF01497 Periplasmic binding protein CEQ20_16520 PF01032 FecCD transport family CEQ20_16525 PF00005 ABC transporter CEQ20_16530 PF01053 Cys/Met metabolism PLP-dependent enzyme CEQ20_16535 PF03222 Tryptophan/tyrosine permease family CEQ20_16540 PF03466 LysR substrate binding domain CEQ20_16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_16545 PF01206 Sulfurtransferase TusA CEQ20_16550 PF04143 Sulphur transport CEQ20_16555 PF01312 FlhB HrpN YscU SpaS Family CEQ20_16560 PF01311 Bacterial export proteins, family 1 CEQ20_16565 PF01313 Bacterial export proteins, family 3 CEQ20_16570 PF00813 FliP family CEQ20_16575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ20_16590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_16590 PF18269 T3SS EscN ATPase C-terminal domain CEQ20_16610 PF01514 Secretory protein of YscJ/FliF family CEQ20_16630 PF14525 AraC-binding-like domain CEQ20_16630 PF12833 Helix-turn-helix domain CEQ20_16650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEQ20_16650 PF00072 Response regulator receiver domain CEQ20_16650 PF01627 Hpt domain CEQ20_16650 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_16650 PF00672 HAMP domain CEQ20_16650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_16655 PF00196 Bacterial regulatory proteins, luxR family CEQ20_16655 PF00072 Response regulator receiver domain CEQ20_16660 PF00375 Sodium:dicarboxylate symporter family CEQ20_16665 PF16177 Acetyl-coenzyme A synthetase N-terminus CEQ20_16665 PF00501 AMP-binding enzyme CEQ20_16665 PF13193 AMP-binding enzyme C-terminal domain CEQ20_16670 PF04341 Protein of unknown function, DUF485 CEQ20_16675 PF00474 Sodium:solute symporter family CEQ20_16725 PF12724 Flavodoxin domain CEQ20_16730 PF02386 Cation transport protein CEQ20_16735 PF01205 Uncharacterized protein family UPF0029 CEQ20_16735 PF09186 Domain of unknown function (DUF1949) CEQ20_16740 PF00557 Metallopeptidase family M24 CEQ20_16745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEQ20_16745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEQ20_16745 PF00378 Enoyl-CoA hydratase/isomerase CEQ20_16750 PF00108 Thiolase, N-terminal domain CEQ20_16750 PF02803 Thiolase, C-terminal domain CEQ20_16755 PF00175 Oxidoreductase NAD-binding domain CEQ20_16755 PF00970 Oxidoreductase FAD-binding domain CEQ20_16760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEQ20_16765 PF02357 Transcription termination factor nusG CEQ20_16770 PF00490 Delta-aminolevulinic acid dehydratase CEQ20_16775 PF01026 TatD related DNase CEQ20_16780 PF00902 Sec-independent protein translocase protein (TatC) CEQ20_16790 PF02416 mttA/Hcf106 family CEQ20_16795 PF03109 ABC1 family CEQ20_16800 PF02036 SCP-2 sterol transfer family CEQ20_16805 PF01209 ubiE/COQ5 methyltransferase family CEQ20_16810 PF02646 RmuC family CEQ20_16815 PF09335 SNARE associated Golgi protein CEQ20_16820 PF02554 Carbon starvation protein CstA CEQ20_16820 PF13722 5TM C-terminal transporter carbon starvation CstA CEQ20_16830 PF01048 Phosphorylase superfamily CEQ20_16835 PF01738 Dienelactone hydrolase family CEQ20_16840 PF08267 Cobalamin-independent synthase, N-terminal domain CEQ20_16840 PF01717 Cobalamin-independent synthase, Catalytic domain CEQ20_16845 PF03466 LysR substrate binding domain CEQ20_16845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_16850 PF00892 EamA-like transporter family CEQ20_16855 PF03547 Membrane transport protein CEQ20_16860 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ20_16865 PF00005 ABC transporter CEQ20_16865 PF17912 MalK OB fold domain CEQ20_16870 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_16875 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_16880 PF13416 Bacterial extracellular solute-binding protein CEQ20_16920 PF00005 ABC transporter CEQ20_16925 PF00005 ABC transporter CEQ20_16925 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEQ20_16930 PF02653 Branched-chain amino acid transport system / permease component CEQ20_16930 PF11862 Domain of unknown function (DUF3382) CEQ20_16935 PF02653 Branched-chain amino acid transport system / permease component CEQ20_16940 PF13458 Periplasmic binding protein CEQ20_16945 PF12568 Acetyltransferase (GNAT) domain, PanZ CEQ20_16950 PF00140 Sigma-70 factor, region 1.2 CEQ20_16950 PF04542 Sigma-70 region 2 CEQ20_16950 PF04545 Sigma-70, region 4 CEQ20_16955 PF02687 FtsX-like permease family CEQ20_16955 PF18075 FtsX extracellular domain CEQ20_16960 PF00005 ABC transporter CEQ20_16965 PF00448 SRP54-type protein, GTPase domain CEQ20_16965 PF02881 SRP54-type protein, helical bundle domain CEQ20_16965 PF00448 SRP54-type protein, GTPase domain CEQ20_16965 PF02881 SRP54-type protein, helical bundle domain CEQ20_16980 PF06611 Protein of unknown function (DUF1145) CEQ20_16995 PF07947 YhhN family CEQ20_17000 PF00403 Heavy-metal-associated domain CEQ20_17005 PF01206 Sulfurtransferase TusA CEQ20_17010 PF02592 Putative vitamin uptake transporter CEQ20_17015 PF08786 DcrB CEQ20_17020 PF13183 4Fe-4S dicluster domain CEQ20_17020 PF02754 Cysteine-rich domain CEQ20_17025 PF00890 FAD binding domain CEQ20_17030 PF04324 BFD-like [2Fe-2S] binding domain CEQ20_17030 PF01266 FAD dependent oxidoreductase CEQ20_17045 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ20_17060 PF12146 Serine aminopeptidase, S33 CEQ20_17065 PF01810 LysE type translocator CEQ20_17070 PF01810 LysE type translocator CEQ20_17075 PF00270 DEAD/DEAH box helicase CEQ20_17075 PF00271 Helicase conserved C-terminal domain CEQ20_17075 PF00570 HRDC domain CEQ20_17075 PF16124 RecQ zinc-binding CEQ20_17075 PF09382 RQC domain CEQ20_17085 PF03061 Thioesterase superfamily CEQ20_17090 PF00892 EamA-like transporter family CEQ20_17095 PF01544 CorA-like Mg2+ transporter protein CEQ20_17100 PF09370 Phosphoenolpyruvate hydrolase-like CEQ20_17115 PF13361 UvrD-like helicase C-terminal domain CEQ20_17115 PF00580 UvrD/REP helicase N-terminal domain CEQ20_17120 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_17125 PF02899 Phage integrase, N-terminal SAM-like domain CEQ20_17125 PF00589 Phage integrase family CEQ20_17130 PF04340 Protein of unknown function, DUF484 CEQ20_17135 PF01678 Diaminopimelate epimerase CEQ20_17140 PF13627 Prokaryotic lipoprotein-attachment site CEQ20_17145 PF01491 Frataxin-like domain CEQ20_17155 PF01295 Adenylate cyclase, class-I CEQ20_17155 PF12633 Adenylate cyclase NT domain CEQ20_17165 PF03900 Porphobilinogen deaminase, C-terminal domain CEQ20_17165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEQ20_17170 PF02602 Uroporphyrinogen-III synthase HemD CEQ20_17175 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CEQ20_17180 PF07219 HemY protein N-terminus CEQ20_17180 PF07719 Tetratricopeptide repeat CEQ20_17205 PF00324 Amino acid permease CEQ20_17210 PF03808 Glycosyl transferase WecB/TagA/CpsF family CEQ20_17215 PF06899 WzyE protein, O-antigen assembly polymerase CEQ20_17220 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CEQ20_17225 PF01943 Polysaccharide biosynthesis protein CEQ20_17230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEQ20_17240 PF00483 Nucleotidyl transferase CEQ20_17245 PF16363 GDP-mannose 4,6 dehydratase CEQ20_17250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEQ20_17250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEQ20_17250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEQ20_17255 PF02350 UDP-N-acetylglucosamine 2-epimerase CEQ20_17260 PF02706 Chain length determinant protein CEQ20_17265 PF00953 Glycosyl transferase family 4 CEQ20_17270 PF07498 Rho termination factor, N-terminal domain CEQ20_17270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_17270 PF07497 Rho termination factor, RNA-binding domain CEQ20_17275 PF00085 Thioredoxin CEQ20_17295 PF02541 Ppx/GppA phosphatase family CEQ20_17300 PF13361 UvrD-like helicase C-terminal domain CEQ20_17300 PF00580 UvrD/REP helicase N-terminal domain CEQ20_17330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_17330 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_17335 PF00577 Outer membrane usher protein CEQ20_17335 PF13953 PapC C-terminal domain CEQ20_17335 PF13954 PapC N-terminal domain CEQ20_17345 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_17345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_17350 PF01320 Colicin immunity protein / pyocin immunity protein CEQ20_17380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEQ20_17380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEQ20_17385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_17385 PF03466 LysR substrate binding domain CEQ20_17405 PF00585 C-terminal regulatory domain of Threonine dehydratase CEQ20_17405 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_17410 PF00920 Dehydratase family CEQ20_17415 PF01063 Amino-transferase class IV CEQ20_17425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_17425 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ20_17425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_17430 PF08046 IlvGEDA operon leader peptide CEQ20_17440 PF01078 Magnesium chelatase, subunit ChlI CEQ20_17440 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEQ20_17445 PF04219 Protein of unknown function, DUF CEQ20_17450 PF03466 LysR substrate binding domain CEQ20_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_17455 PF02653 Branched-chain amino acid transport system / permease component CEQ20_17460 PF02653 Branched-chain amino acid transport system / permease component CEQ20_17465 PF00005 ABC transporter CEQ20_17470 PF13407 Periplasmic binding protein domain CEQ20_17515 PF01177 Asp/Glu/Hydantoin racemase CEQ20_17520 PF07715 TonB-dependent Receptor Plug Domain CEQ20_17520 PF00593 TonB dependent receptor CEQ20_17525 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ20_17530 PF07226 Protein of unknown function (DUF1422) CEQ20_17535 PF00440 Bacterial regulatory proteins, tetR family CEQ20_17540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ20_17540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_17545 PF03466 LysR substrate binding domain CEQ20_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_17550 PF08534 Redoxin CEQ20_17550 PF00462 Glutaredoxin CEQ20_17555 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_17555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ20_17560 PF03544 Gram-negative bacterial TonB protein C-terminal CEQ20_17570 PF00664 ABC transporter transmembrane region CEQ20_17570 PF00005 ABC transporter CEQ20_17580 PF07715 TonB-dependent Receptor Plug Domain CEQ20_17580 PF00593 TonB dependent receptor CEQ20_17585 PF14698 Argininosuccinate lyase C-terminal CEQ20_17585 PF00206 Lyase CEQ20_17590 PF00696 Amino acid kinase family CEQ20_17595 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ20_17595 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ20_17600 PF07687 Peptidase dimerisation domain CEQ20_17600 PF01546 Peptidase family M20/M25/M40 CEQ20_17605 PF00311 Phosphoenolpyruvate carboxylase CEQ20_17625 PF02219 Methylenetetrahydrofolate reductase CEQ20_17630 PF03447 Homoserine dehydrogenase, NAD binding domain CEQ20_17630 PF00742 Homoserine dehydrogenase CEQ20_17630 PF00696 Amino acid kinase family CEQ20_17635 PF01053 Cys/Met metabolism PLP-dependent enzyme CEQ20_17640 PF01340 Met Apo-repressor, MetJ CEQ20_17645 PF05360 yiaA/B two helix domain CEQ20_17650 PF01197 Ribosomal protein L31 CEQ20_17655 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEQ20_17655 PF00271 Helicase conserved C-terminal domain CEQ20_17655 PF17764 3′ DNA-binding domain (3′BD) CEQ20_17655 PF00270 DEAD/DEAH box helicase CEQ20_17655 PF18074 Primosomal protein N C-terminal domain CEQ20_17665 PF00356 Bacterial regulatory proteins, lacI family CEQ20_17670 PF05036 Sporulation related domain CEQ20_17675 PF00227 Proteasome subunit CEQ20_17680 PF07724 AAA domain (Cdc48 subfamily) CEQ20_17680 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_17680 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_17685 PF01040 UbiA prenyltransferase family CEQ20_17690 PF03737 Aldolase/RraA CEQ20_17710 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_17710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_17715 PF03412 Peptidase C39 family CEQ20_17715 PF00005 ABC transporter CEQ20_17715 PF00664 ABC transporter transmembrane region CEQ20_17725 PF06005 Cell division protein ZapB CEQ20_17740 PF00230 Major intrinsic protein CEQ20_17745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_17745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_17750 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEQ20_17755 PF00175 Oxidoreductase NAD-binding domain CEQ20_17755 PF00970 Oxidoreductase FAD-binding domain CEQ20_17760 PF05656 Protein of unknown function (DUF805) CEQ20_17765 PF07305 Protein of unknown function (DUF1454) CEQ20_17770 PF00121 Triosephosphate isomerase CEQ20_17775 PF03466 LysR substrate binding domain CEQ20_17775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_17780 PF02585 GlcNAc-PI de-N-acetylase CEQ20_17785 PF03737 Aldolase/RraA CEQ20_17790 PF00939 Sodium:sulfate symporter transmembrane region CEQ20_17805 PF00365 Phosphofructokinase CEQ20_17810 PF01545 Cation efflux family CEQ20_17810 PF16916 Dimerisation domain of Zinc Transporter CEQ20_17820 PF04754 Putative transposase, YhgA-like CEQ20_17830 PF07813 LTXXQ motif family protein CEQ20_17835 PF00486 Transcriptional regulatory protein, C terminal CEQ20_17835 PF00072 Response regulator receiver domain CEQ20_17840 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_17840 PF00672 HAMP domain CEQ20_17840 PF16527 Two-component sensor protein CpxA, periplasmic domain CEQ20_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_17845 PF02805 Metal binding domain of Ada CEQ20_17845 PF12833 Helix-turn-helix domain CEQ20_17845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEQ20_17845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEQ20_17850 PF00588 SpoU rRNA Methylase family CEQ20_17855 PF06426 Serine acetyltransferase, N-terminal CEQ20_17855 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_17865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEQ20_17865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEQ20_17870 PF02556 Preprotein translocase subunit SecB CEQ20_17875 PF00462 Glutaredoxin CEQ20_17880 PF00581 Rhodanese-like domain CEQ20_17885 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEQ20_17885 PF01676 Metalloenzyme superfamily CEQ20_17890 PF01551 Peptidase family M23 CEQ20_17895 PF04748 Divergent polysaccharide deacetylase CEQ20_17900 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_17900 PF00107 Zinc-binding dehydrogenase CEQ20_17905 PF00155 Aminotransferase class I and II CEQ20_17910 PF01370 NAD dependent epimerase/dehydratase family CEQ20_17915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ20_17920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ20_17925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEQ20_17930 PF00535 Glycosyl transferase family 2 CEQ20_17935 PF01467 Cytidylyltransferase-like CEQ20_17940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEQ20_17940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEQ20_17940 PF06827 Zinc finger found in FPG and IleRS CEQ20_17945 PF00471 Ribosomal protein L33 CEQ20_17950 PF00830 Ribosomal L28 family CEQ20_17960 PF04002 RadC-like JAB domain CEQ20_17965 PF04127 DNA / pantothenate metabolism flavoprotein CEQ20_17965 PF02441 Flavoprotein CEQ20_17970 PF00692 dUTPase CEQ20_17975 PF00440 Bacterial regulatory proteins, tetR family CEQ20_17980 PF00156 Phosphoribosyl transferase domain CEQ20_17985 PF01138 3' exoribonuclease family, domain 1 CEQ20_17985 PF03725 3' exoribonuclease family, domain 2 CEQ20_17990 PF03755 YicC-like family, N-terminal region CEQ20_17990 PF08340 Domain of unknown function (DUF1732) CEQ20_18010 PF01381 Helix-turn-helix CEQ20_18020 PF04002 RadC-like JAB domain CEQ20_18035 PF05930 Prophage CP4-57 regulatory protein (AlpA) CEQ20_18055 PF03458 UPF0126 domain CEQ20_18060 PF01653 NAD-dependent DNA ligase adenylation domain CEQ20_18060 PF03120 NAD-dependent DNA ligase OB-fold domain CEQ20_18065 PF00625 Guanylate kinase CEQ20_18070 PF01192 RNA polymerase Rpb6 CEQ20_18075 PF13291 ACT domain CEQ20_18075 PF04607 Region found in RelA / SpoT proteins CEQ20_18075 PF02824 TGS domain CEQ20_18080 PF12105 SpoU, rRNA methylase, C-terminal CEQ20_18080 PF00588 SpoU rRNA Methylase family CEQ20_18085 PF00271 Helicase conserved C-terminal domain CEQ20_18085 PF00270 DEAD/DEAH box helicase CEQ20_18085 PF17191 RecG wedge domain CEQ20_18095 PF03616 Sodium/glutamate symporter CEQ20_18100 PF00860 Permease family CEQ20_18105 PF05170 AsmA family CEQ20_18110 PF09500 Putative thioesterase (yiiD_Cterm) CEQ20_18110 PF00583 Acetyltransferase (GNAT) family CEQ20_18115 PF02580 D-Tyr-tRNA(Tyr) deacylase CEQ20_18120 PF03631 Virulence factor BrkB CEQ20_18125 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_18135 PF00120 Glutamine synthetase, catalytic domain CEQ20_18135 PF03951 Glutamine synthetase, beta-Grasp domain CEQ20_18145 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_18145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_18145 PF00989 PAS fold CEQ20_18150 PF00072 Response regulator receiver domain CEQ20_18150 PF00158 Sigma-54 interaction domain CEQ20_18150 PF02954 Bacterial regulatory protein, Fis family CEQ20_18155 PF06969 HemN C-terminal domain CEQ20_18155 PF04055 Radical SAM superfamily CEQ20_18165 PF04220 Der GTPase activator (YihI) CEQ20_18175 PF01926 50S ribosome-binding GTPase CEQ20_18180 PF01367 5'-3' exonuclease, C-terminal SAM fold CEQ20_18180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEQ20_18180 PF00476 DNA polymerase family A CEQ20_18180 PF01612 3'-5' exonuclease CEQ20_18185 PF01323 DSBA-like thioredoxin domain CEQ20_18190 PF01636 Phosphotransferase enzyme family CEQ20_18195 PF06288 Protein of unknown function (DUF1040) CEQ20_18200 PF12804 MobA-like NTP transferase domain CEQ20_18205 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEQ20_18210 PF00872 Transposase, Mutator family CEQ20_18245 PF00392 Bacterial regulatory proteins, gntR family CEQ20_18245 PF07729 FCD domain CEQ20_18250 PF07690 Major Facilitator Superfamily CEQ20_18260 PF00294 pfkB family carbohydrate kinase CEQ20_18265 PF05025 RbsD / FucU transport protein family CEQ20_18270 PF02705 K+ potassium transporter CEQ20_18275 PF07728 AAA domain (dynein-related subfamily) CEQ20_18275 PF17868 AAA lid domain CEQ20_18275 PF12592 Protein of unknown function (DUF3763) CEQ20_18280 PF05762 VWA domain containing CoxE-like protein CEQ20_18285 PF03590 Aspartate-ammonia ligase CEQ20_18290 PF01037 Lrp/AsnC ligand binding domain CEQ20_18295 PF00258 Flavodoxin CEQ20_18305 PF13932 GidA associated domain CEQ20_18305 PF01134 Glucose inhibited division protein A CEQ20_18310 PF02527 rRNA small subunit methyltransferase G CEQ20_18315 PF03899 ATP synthase I chain CEQ20_18320 PF00119 ATP synthase A chain CEQ20_18325 PF00137 ATP synthase subunit C CEQ20_18330 PF00430 ATP synthase B/B' CF(0) CEQ20_18335 PF00213 ATP synthase delta (OSCP) subunit CEQ20_18340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_18340 PF00306 ATP synthase alpha/beta chain, C terminal domain CEQ20_18340 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEQ20_18345 PF00231 ATP synthase CEQ20_18350 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEQ20_18350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ20_18355 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEQ20_18355 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEQ20_18360 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_18360 PF12804 MobA-like NTP transferase domain CEQ20_18370 PF01380 SIS domain CEQ20_18375 PF12849 PBP superfamily domain CEQ20_18380 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_18385 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_18390 PF00005 ABC transporter CEQ20_18395 PF01895 PhoU domain CEQ20_18405 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_18410 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_18415 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_18420 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_18430 PF00860 Permease family CEQ20_18450 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEQ20_18450 PF07055 Enoyl reductase FAD binding domain CEQ20_18450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEQ20_18455 PF01926 50S ribosome-binding GTPase CEQ20_18455 PF10396 GTP-binding protein TrmE N-terminus CEQ20_18455 PF12631 MnmE helical domain CEQ20_18460 PF02096 60Kd inner membrane protein CEQ20_18460 PF14849 YidC periplasmic domain CEQ20_18465 PF01809 Putative membrane protein insertion efficiency factor CEQ20_18470 PF00825 Ribonuclease P CEQ20_18475 PF00468 Ribosomal protein L34 CEQ20_18490 PF11638 DnaA N-terminal domain CEQ20_18490 PF08299 Bacterial dnaA protein helix-turn-helix CEQ20_18490 PF00308 Bacterial dnaA protein CEQ20_18495 PF02767 DNA polymerase III beta subunit, central domain CEQ20_18495 PF00712 DNA polymerase III beta subunit, N-terminal domain CEQ20_18495 PF02768 DNA polymerase III beta subunit, C-terminal domain CEQ20_18500 PF02463 RecF/RecN/SMC N terminal domain CEQ20_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_18505 PF01751 Toprim domain CEQ20_18505 PF00986 DNA gyrase B subunit, carboxyl terminus CEQ20_18505 PF18053 DNA gyrase B subunit insert domain CEQ20_18505 PF00204 DNA gyrase B CEQ20_18515 PF01526 Tn3 transposase DDE domain CEQ20_18515 PF13700 Domain of unknown function (DUF4158) CEQ20_18520 PF07979 Intimin C-type lectin domain CEQ20_18520 PF02369 Bacterial Ig-like domain (group 1) CEQ20_18520 PF09134 Invasin, domain 3 CEQ20_18520 PF11924 Inverse autotransporter, beta-domain CEQ20_18525 PF01527 Transposase CEQ20_18530 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEQ20_18535 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_18535 PF13291 ACT domain CEQ20_18540 PF12566 Protein of unknown function (DUF3748) CEQ20_18540 PF07676 WD40-like Beta Propeller Repeat CEQ20_18545 PF07119 Protein of unknown function (DUF1375) CEQ20_18550 PF00011 Hsp20/alpha crystallin family CEQ20_18555 PF00011 Hsp20/alpha crystallin family CEQ20_18560 PF06826 Predicted Permease Membrane Region CEQ20_18560 PF02080 TrkA-C domain CEQ20_18565 PF00155 Aminotransferase class I and II CEQ20_18585 PF00128 Alpha amylase, catalytic domain CEQ20_18590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ20_18590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ20_18605 PF13488 Glycine zipper CEQ20_18605 PF00691 OmpA family CEQ20_18620 PF13693 Winged helix-turn-helix DNA-binding CEQ20_18630 PF07157 DNA circularisation protein N-terminus CEQ20_18640 PF06890 Bacteriophage Mu Gp45 protein CEQ20_18645 PF07409 Phage protein GP46 CEQ20_18650 PF04865 Baseplate J-like protein CEQ20_18675 PF03352 Methyladenine glycosylase CEQ20_18680 PF02091 Glycyl-tRNA synthetase alpha subunit CEQ20_18685 PF02092 Glycyl-tRNA synthetase beta subunit CEQ20_18685 PF05746 DALR anticodon binding domain CEQ20_18690 PF11254 Protein of unknown function (DUF3053) CEQ20_18695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ20_18695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ20_18695 PF02378 Phosphotransferase system, EIIC CEQ20_18700 PF08125 Mannitol dehydrogenase C-terminal domain CEQ20_18700 PF01232 Mannitol dehydrogenase Rossmann domain CEQ20_18705 PF05068 Mannitol repressor CEQ20_18710 PF10928 Protein of unknown function (DUF2810) CEQ20_18725 PF02203 Tar ligand binding domain homologue CEQ20_18725 PF00672 HAMP domain CEQ20_18725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ20_18730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEQ20_18730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEQ20_18735 PF02634 FdhD/NarQ family CEQ20_18740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_18740 PF00384 Molybdopterin oxidoreductase CEQ20_18740 PF01568 Molydopterin dinucleotide binding domain CEQ20_18745 PF00384 Molybdopterin oxidoreductase CEQ20_18745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ20_18745 PF01568 Molydopterin dinucleotide binding domain CEQ20_18750 PF13247 4Fe-4S dicluster domain CEQ20_18750 PF09163 Formate dehydrogenase N, transmembrane CEQ20_18755 PF01292 Prokaryotic cytochrome b561 CEQ20_18760 PF04216 Protein involved in formate dehydrogenase formation CEQ20_18765 PF03841 L-seryl-tRNA selenium transferase CEQ20_18765 PF12390 Selenocysteine synthase N terminal CEQ20_18770 PF00009 Elongation factor Tu GTP binding domain CEQ20_18770 PF09106 Elongation factor SelB, winged helix CEQ20_18770 PF03144 Elongation factor Tu domain 2 CEQ20_18770 PF09107 Elongation factor SelB, winged helix CEQ20_18795 PF07690 Major Facilitator Superfamily CEQ20_18820 PF01757 Acyltransferase family CEQ20_18825 PF00419 Fimbrial protein CEQ20_18830 PF13953 PapC C-terminal domain CEQ20_18830 PF00577 Outer membrane usher protein CEQ20_18830 PF13954 PapC N-terminal domain CEQ20_18835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEQ20_18835 PF02753 Pili assembly chaperone PapD, C-terminal domain CEQ20_18845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_18845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_18855 PF13407 Periplasmic binding protein domain CEQ20_18860 PF00005 ABC transporter CEQ20_18865 PF02653 Branched-chain amino acid transport system / permease component CEQ20_18870 PF12833 Helix-turn-helix domain CEQ20_18890 PF14338 Mrr N-terminal domain CEQ20_18890 PF04471 Restriction endonuclease CEQ20_18925 PF04002 RadC-like JAB domain CEQ20_18930 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CEQ20_18935 PF06755 CbtA_toxin of type IV toxin-antitoxin system CEQ20_18945 PF00589 Phage integrase family CEQ20_18945 PF13356 Arm DNA-binding domain CEQ20_18965 PF00005 ABC transporter CEQ20_18970 PF01032 FecCD transport family CEQ20_18975 PF01032 FecCD transport family CEQ20_18980 PF01497 Periplasmic binding protein CEQ20_18995 PF00156 Phosphoribosyl transferase domain CEQ20_19005 PF01175 Urocanase Rossmann-like domain CEQ20_19005 PF17391 Urocanase N-terminal domain CEQ20_19005 PF17392 Urocanase C-terminal domain CEQ20_19010 PF00221 Aromatic amino acid lyase CEQ20_19015 PF00324 Amino acid permease CEQ20_19020 PF12146 Serine aminopeptidase, S33 CEQ20_19025 PF00884 Sulfatase CEQ20_19025 PF08019 Phosphoethanolamine transferase EptA/EptB CEQ20_19030 PF00072 Response regulator receiver domain CEQ20_19030 PF00196 Bacterial regulatory proteins, luxR family CEQ20_19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_19035 PF07730 Histidine kinase CEQ20_19035 PF05231 MASE1 CEQ20_19040 PF07690 Major Facilitator Superfamily CEQ20_19050 PF05594 Haemagluttinin repeat CEQ20_19050 PF13332 Hemagglutinin repeat CEQ20_19050 PF05860 haemagglutination activity domain CEQ20_19050 PF04829 Pre-toxin domain with VENN motif CEQ20_19055 PF17287 POTRA domain CEQ20_19055 PF08479 POTRA domain, ShlB-type CEQ20_19055 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEQ20_19065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_19070 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_19075 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_19075 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_19080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_19080 PF00005 ABC transporter CEQ20_19085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_19085 PF00005 ABC transporter CEQ20_19090 PF01270 Glycosyl hydrolases family 8 CEQ20_19095 PF00563 EAL domain CEQ20_19095 PF17154 Gammaproteobacterial periplasmic sensor domain CEQ20_19095 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_19095 PF00672 HAMP domain CEQ20_19100 PF06178 Oligogalacturonate-specific porin protein (KdgM) CEQ20_19105 PF06917 Periplasmic pectate lyase CEQ20_19115 PF00375 Sodium:dicarboxylate symporter family CEQ20_19120 PF05193 Peptidase M16 inactive domain CEQ20_19120 PF00675 Insulinase (Peptidase family M16) CEQ20_19125 PF00294 pfkB family carbohydrate kinase CEQ20_19130 PF01361 Tautomerase enzyme CEQ20_19135 PF00563 EAL domain CEQ20_19140 PF05170 AsmA family CEQ20_19145 PF02611 CDP-diacylglycerol pyrophosphatase CEQ20_19150 PF03631 Virulence factor BrkB CEQ20_19175 PF02595 Glycerate kinase family CEQ20_19180 PF02447 GntP family permease CEQ20_19190 PF05651 Putative sugar diacid recognition CEQ20_19190 PF17853 GGDEF-like domain CEQ20_19190 PF13556 PucR C-terminal helix-turn-helix domain CEQ20_19195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ20_19195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_19200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEQ20_19205 PF01432 Peptidase family M3 CEQ20_19210 PF04445 Putative SAM-dependent methyltransferase CEQ20_19215 PF08548 Peptidase M10 serralysin C terminal CEQ20_19215 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CEQ20_19215 PF00413 Matrixin CEQ20_19220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEQ20_19220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ20_19225 PF00582 Universal stress protein family CEQ20_19230 PF10625 Universal stress protein B (UspB) CEQ20_19235 PF01384 Phosphate transporter family CEQ20_19245 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_19245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_19245 PF08448 PAS fold CEQ20_19245 PF13188 PAS domain CEQ20_19245 PF00072 Response regulator receiver domain CEQ20_19250 PF00005 ABC transporter CEQ20_19255 PF02653 Branched-chain amino acid transport system / permease component CEQ20_19260 PF13407 Periplasmic binding protein domain CEQ20_19270 PF01116 Fructose-bisphosphate aldolase class-II CEQ20_19280 PF00486 Transcriptional regulatory protein, C terminal CEQ20_19280 PF00072 Response regulator receiver domain CEQ20_19295 PF17954 Quercetinase C-terminal cupin domain CEQ20_19295 PF02678 Pirin CEQ20_19300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ20_19300 PF00356 Bacterial regulatory proteins, lacI family CEQ20_19305 PF02447 GntP family permease CEQ20_19315 PF01202 Shikimate kinase CEQ20_19320 PF05638 Type VI secretion system effector, Hcp CEQ20_19335 PF01914 MarC family integral membrane protein CEQ20_19340 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ20_19340 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ20_19360 PF02369 Bacterial Ig-like domain (group 1) CEQ20_19360 PF07979 Intimin C-type lectin domain CEQ20_19360 PF11924 Inverse autotransporter, beta-domain CEQ20_19360 PF09134 Invasin, domain 3 CEQ20_19365 PF06580 Histidine kinase CEQ20_19365 PF07694 5TMR of 5TMR-LYT CEQ20_19370 PF00128 Alpha amylase, catalytic domain CEQ20_19370 PF02806 Alpha amylase, C-terminal all-beta domain CEQ20_19370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEQ20_19375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEQ20_19375 PF00128 Alpha amylase, catalytic domain CEQ20_19375 PF18390 Glycogen debranching enzyme C-terminal domain CEQ20_19380 PF00483 Nucleotidyl transferase CEQ20_19385 PF08323 Starch synthase catalytic domain CEQ20_19385 PF00534 Glycosyl transferases group 1 CEQ20_19390 PF00343 Carbohydrate phosphorylase CEQ20_19395 PF01266 FAD dependent oxidoreductase CEQ20_19395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEQ20_19410 PF08220 DeoR-like helix-turn-helix domain CEQ20_19410 PF00455 DeoR C terminal sensor domain CEQ20_19415 PF01694 Rhomboid family CEQ20_19415 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CEQ20_19420 PF00581 Rhodanese-like domain CEQ20_19425 PF17874 MalT-like TPR region CEQ20_19425 PF00196 Bacterial regulatory proteins, luxR family CEQ20_19430 PF00343 Carbohydrate phosphorylase CEQ20_19435 PF02446 4-alpha-glucanotransferase CEQ20_19440 PF01106 NifU-like domain CEQ20_19440 PF01521 Iron-sulphur cluster biosynthesis CEQ20_19445 PF00156 Phosphoribosyl transferase domain CEQ20_19450 PF00561 alpha/beta hydrolase fold CEQ20_19455 PF07338 Protein of unknown function (DUF1471) CEQ20_19460 PF09012 FeoC like transcriptional regulator CEQ20_19465 PF17910 FeoB cytosolic helical domain CEQ20_19465 PF07664 Ferrous iron transport protein B C terminus CEQ20_19465 PF07670 Nucleoside recognition CEQ20_19465 PF02421 Ferrous iron transport protein B CEQ20_19470 PF04023 FeoA domain CEQ20_19475 PF16921 Tex protein YqgF-like domain CEQ20_19475 PF09371 Tex-like protein N-terminal domain CEQ20_19475 PF00575 S1 RNA binding domain CEQ20_19475 PF17674 HHH domain CEQ20_19480 PF03449 Transcription elongation factor, N-terminal CEQ20_19480 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ20_19485 PF00072 Response regulator receiver domain CEQ20_19485 PF00486 Transcriptional regulatory protein, C terminal CEQ20_19490 PF00672 HAMP domain CEQ20_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_19490 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_19500 PF01293 Phosphoenolpyruvate carboxykinase CEQ20_19505 PF01430 Hsp33 protein CEQ20_19510 PF01479 S4 domain CEQ20_19515 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_19520 PF07095 Intracellular growth attenuator protein IgaA CEQ20_19530 PF00293 NUDIX domain CEQ20_19535 PF00905 Penicillin binding protein transpeptidase domain CEQ20_19535 PF17092 Penicillin-binding protein OB-like domain CEQ20_19535 PF00912 Transglycosylase CEQ20_19565 PF00263 Bacterial type II and III secretion system protein CEQ20_19565 PF03958 Bacterial type II/III secretion system short domain CEQ20_19570 PF01202 Shikimate kinase CEQ20_19575 PF01761 3-dehydroquinate synthase CEQ20_19580 PF05036 Sporulation related domain CEQ20_19585 PF02086 D12 class N6 adenine-specific DNA methyltransferase CEQ20_19595 PF00834 Ribulose-phosphate 3 epimerase family CEQ20_19600 PF13419 Haloacid dehalogenase-like hydrolase CEQ20_19605 PF00579 tRNA synthetases class I (W and Y) CEQ20_19610 PF10414 Sirohaem synthase dimerisation region CEQ20_19610 PF14824 Sirohaem biosynthesis protein central CEQ20_19610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ20_19615 PF01226 Formate/nitrite transporter CEQ20_19620 PF13806 Rieske-like [2Fe-2S] domain CEQ20_19625 PF04324 BFD-like [2Fe-2S] binding domain CEQ20_19625 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEQ20_19625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_19625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEQ20_19625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEQ20_19630 PF07969 Amidohydrolase family CEQ20_19635 PF07690 Major Facilitator Superfamily CEQ20_19645 PF00356 Bacterial regulatory proteins, lacI family CEQ20_19650 PF11975 Family 4 glycosyl hydrolase C-terminal domain CEQ20_19650 PF02056 Family 4 glycosyl hydrolase CEQ20_19655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEQ20_19660 PF05872 Bacterial protein of unknown function (DUF853) CEQ20_19665 PF00117 Glutamine amidotransferase class-I CEQ20_19670 PF00202 Aminotransferase class-III CEQ20_19675 PF12805 FUSC-like inner membrane protein yccS CEQ20_19680 PF00027 Cyclic nucleotide-binding domain CEQ20_19680 PF13545 Crp-like helix-turn-helix domain CEQ20_19685 PF02566 OsmC-like protein CEQ20_19695 PF00485 Phosphoribulokinase / Uridine kinase family CEQ20_19700 PF06794 Uncharacterised protein family (UPF0270) CEQ20_19705 PF00561 alpha/beta hydrolase fold CEQ20_19710 PF01810 LysE type translocator CEQ20_19715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEQ20_19720 PF00005 ABC transporter CEQ20_19725 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_19730 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CEQ20_19745 PF00005 ABC transporter CEQ20_19745 PF12848 ABC transporter CEQ20_19750 PF02525 Flavodoxin-like fold CEQ20_19755 PF02254 TrkA-N domain CEQ20_19755 PF00999 Sodium/hydrogen exchanger family CEQ20_19760 PF09526 Probable metal-binding protein (DUF2387) CEQ20_19765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ20_19775 PF04102 SlyX CEQ20_19780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ20_19780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEQ20_19785 PF08348 YheO-like PAS domain CEQ20_19785 PF13309 HTH domain CEQ20_19790 PF02635 DsrE/DsrF-like family CEQ20_19795 PF02635 DsrE/DsrF-like family CEQ20_19800 PF04077 DsrH like protein CEQ20_19805 PF00164 Ribosomal protein S12/S23 CEQ20_19810 PF00177 Ribosomal protein S7p/S5e CEQ20_19815 PF00679 Elongation factor G C-terminus CEQ20_19815 PF14492 Elongation Factor G, domain II CEQ20_19815 PF03764 Elongation factor G, domain IV CEQ20_19815 PF00009 Elongation factor Tu GTP binding domain CEQ20_19815 PF03144 Elongation factor Tu domain 2 CEQ20_19825 PF00009 Elongation factor Tu GTP binding domain CEQ20_19825 PF03144 Elongation factor Tu domain 2 CEQ20_19825 PF03143 Elongation factor Tu C-terminal domain CEQ20_19830 PF04324 BFD-like [2Fe-2S] binding domain CEQ20_19835 PF00210 Ferritin-like domain CEQ20_19840 PF00338 Ribosomal protein S10p/S20e CEQ20_19845 PF00297 Ribosomal protein L3 CEQ20_19850 PF00573 Ribosomal protein L4/L1 family CEQ20_19855 PF00276 Ribosomal protein L23 CEQ20_19860 PF00181 Ribosomal Proteins L2, RNA binding domain CEQ20_19860 PF03947 Ribosomal Proteins L2, C-terminal domain CEQ20_19865 PF00203 Ribosomal protein S19 CEQ20_19870 PF00237 Ribosomal protein L22p/L17e CEQ20_19875 PF00189 Ribosomal protein S3, C-terminal domain CEQ20_19875 PF07650 KH domain CEQ20_19880 PF00252 Ribosomal protein L16p/L10e CEQ20_19885 PF00831 Ribosomal L29 protein CEQ20_19890 PF00366 Ribosomal protein S17 CEQ20_19895 PF00238 Ribosomal protein L14p/L23e CEQ20_19900 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CEQ20_19900 PF00467 KOW motif CEQ20_19905 PF00281 Ribosomal protein L5 CEQ20_19905 PF00673 ribosomal L5P family C-terminus CEQ20_19910 PF00253 Ribosomal protein S14p/S29e CEQ20_19915 PF00410 Ribosomal protein S8 CEQ20_19920 PF00347 Ribosomal protein L6 CEQ20_19925 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEQ20_19930 PF00333 Ribosomal protein S5, N-terminal domain CEQ20_19930 PF03719 Ribosomal protein S5, C-terminal domain CEQ20_19935 PF00327 Ribosomal protein L30p/L7e CEQ20_19940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEQ20_19945 PF00344 SecY translocase CEQ20_19950 PF00444 Ribosomal protein L36 CEQ20_19955 PF00416 Ribosomal protein S13/S18 CEQ20_19960 PF00411 Ribosomal protein S11 CEQ20_19965 PF00163 Ribosomal protein S4/S9 N-terminal domain CEQ20_19965 PF01479 S4 domain CEQ20_19970 PF01000 RNA polymerase Rpb3/RpoA insert domain CEQ20_19970 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CEQ20_19970 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CEQ20_19975 PF01196 Ribosomal protein L17 CEQ20_19980 PF13411 MerR HTH family regulatory protein CEQ20_19985 PF03889 Alternative ribosome-rescue factor A CEQ20_19990 PF01741 Large-conductance mechanosensitive channel, MscL CEQ20_19995 PF02080 TrkA-C domain CEQ20_19995 PF02254 TrkA-N domain CEQ20_20000 PF01029 NusB family CEQ20_20000 PF01189 16S rRNA methyltransferase RsmB/F CEQ20_20005 PF00551 Formyl transferase CEQ20_20005 PF02911 Formyl transferase, C-terminal domain CEQ20_20010 PF01327 Polypeptide deformylase CEQ20_20015 PF02481 DNA recombination-mediator protein A CEQ20_20015 PF17782 DprA winged helix domain CEQ20_20020 PF04361 Protein of unknown function (DUF494) CEQ20_20025 PF01396 Topoisomerase DNA binding C4 zinc finger CEQ20_20030 PF01300 Telomere recombination CEQ20_20035 PF01488 Shikimate / quinate 5-dehydrogenase CEQ20_20035 PF08501 Shikimate dehydrogenase substrate binding domain CEQ20_20035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEQ20_20040 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ20_20075 PF01565 FAD binding domain CEQ20_20075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEQ20_20080 PF02237 Biotin protein ligase C terminal domain CEQ20_20080 PF03099 Biotin/lipoate A/B protein ligase family CEQ20_20080 PF08279 HTH domain CEQ20_20085 PF00485 Phosphoribulokinase / Uridine kinase family CEQ20_20090 PF13673 Acetyltransferase (GNAT) domain CEQ20_20115 PF03144 Elongation factor Tu domain 2 CEQ20_20115 PF00009 Elongation factor Tu GTP binding domain CEQ20_20115 PF03143 Elongation factor Tu C-terminal domain CEQ20_20120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEQ20_20125 PF00467 KOW motif CEQ20_20125 PF02357 Transcription termination factor nusG CEQ20_20130 PF00298 Ribosomal protein L11, RNA binding domain CEQ20_20130 PF03946 Ribosomal protein L11, N-terminal domain CEQ20_20135 PF00687 Ribosomal protein L1p/L10e family CEQ20_20140 PF00466 Ribosomal protein L10 CEQ20_20145 PF00542 Ribosomal protein L7/L12 C-terminal domain CEQ20_20145 PF16320 Ribosomal protein L7/L12 dimerisation domain CEQ20_20150 PF04560 RNA polymerase Rpb2, domain 7 CEQ20_20150 PF04563 RNA polymerase beta subunit CEQ20_20150 PF04561 RNA polymerase Rpb2, domain 2 CEQ20_20150 PF10385 RNA polymerase beta subunit external 1 domain CEQ20_20150 PF04565 RNA polymerase Rpb2, domain 3 CEQ20_20150 PF00562 RNA polymerase Rpb2, domain 6 CEQ20_20155 PF04998 RNA polymerase Rpb1, domain 5 CEQ20_20155 PF05000 RNA polymerase Rpb1, domain 4 CEQ20_20155 PF04983 RNA polymerase Rpb1, domain 3 CEQ20_20155 PF00623 RNA polymerase Rpb1, domain 2 CEQ20_20155 PF04997 RNA polymerase Rpb1, domain 1 CEQ20_20165 PF04055 Radical SAM superfamily CEQ20_20165 PF06968 Biotin and Thiamin Synthesis associated domain CEQ20_20170 PF05690 Thiazole biosynthesis protein ThiG CEQ20_20180 PF00899 ThiF family CEQ20_20185 PF02581 Thiamine monophosphate synthase CEQ20_20190 PF01964 Radical SAM ThiC family CEQ20_20190 PF13667 ThiC-associated domain CEQ20_20195 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CEQ20_20200 PF09297 NADH pyrophosphatase zinc ribbon domain CEQ20_20200 PF00293 NUDIX domain CEQ20_20210 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEQ20_20215 PF04493 Endonuclease V CEQ20_20220 PF04222 Protein of unknown function (DUF416) CEQ20_20225 PF00216 Bacterial DNA-binding protein CEQ20_20230 PF07356 Protein of unknown function (DUF1481) CEQ20_20235 PF02843 Phosphoribosylglycinamide synthetase, C domain CEQ20_20235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEQ20_20235 PF02844 Phosphoribosylglycinamide synthetase, N domain CEQ20_20240 PF01808 AICARFT/IMPCHase bienzyme CEQ20_20240 PF02142 MGS-like domain CEQ20_20290 PF04204 Homoserine O-succinyltransferase CEQ20_20295 PF01274 Malate synthase CEQ20_20300 PF00463 Isocitrate lyase family CEQ20_20305 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CEQ20_20310 PF01614 Bacterial transcriptional regulator CEQ20_20310 PF09339 IclR helix-turn-helix domain CEQ20_20315 PF02574 Homocysteine S-methyltransferase CEQ20_20315 PF02607 B12 binding domain CEQ20_20315 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEQ20_20315 PF02310 B12 binding domain CEQ20_20315 PF00809 Pterin binding enzyme CEQ20_20330 PF01842 ACT domain CEQ20_20330 PF00696 Amino acid kinase family CEQ20_20335 PF00342 Phosphoglucose isomerase CEQ20_20340 PF06146 Phosphate-starvation-inducible E CEQ20_20345 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_20350 PF14785 Maltose transport system permease protein MalF P2 domain CEQ20_20350 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_20355 PF01547 Bacterial extracellular solute-binding protein CEQ20_20365 PF17912 MalK OB fold domain CEQ20_20365 PF00005 ABC transporter CEQ20_20370 PF02264 LamB porin CEQ20_20375 PF07148 Maltose operon periplasmic protein precursor (MalM) CEQ20_20385 PF05638 Type VI secretion system effector, Hcp CEQ20_20435 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_20435 PF17871 AAA lid domain CEQ20_20435 PF07724 AAA domain (Cdc48 subfamily) CEQ20_20435 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_20470 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_20480 PF14220 Domain of unknown function (DUF4329) CEQ20_20480 PF05593 RHS Repeat CEQ20_20480 PF03527 RHS protein CEQ20_20510 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_20570 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_20585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ20_20585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEQ20_20590 PF12833 Helix-turn-helix domain CEQ20_20590 PF02311 AraC-like ligand binding domain CEQ20_20595 PF05025 RbsD / FucU transport protein family CEQ20_20600 PF00294 pfkB family carbohydrate kinase CEQ20_20625 PF09084 NMT1/THI5 like CEQ20_20630 PF00296 Luciferase-like monooxygenase CEQ20_20635 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_20645 PF00589 Phage integrase family CEQ20_20645 PF14659 Phage integrase, N-terminal SAM-like domain CEQ20_20645 PF13356 Arm DNA-binding domain CEQ20_20670 PF07690 Major Facilitator Superfamily CEQ20_20675 PF02627 Carboxymuconolactone decarboxylase family CEQ20_20680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEQ20_20680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEQ20_20685 PF00753 Metallo-beta-lactamase superfamily CEQ20_20690 PF05433 Glycine zipper 2TM domain CEQ20_20700 PF00313 'Cold-shock' DNA-binding domain CEQ20_20705 PF00313 'Cold-shock' DNA-binding domain CEQ20_20710 PF00313 'Cold-shock' DNA-binding domain CEQ20_20725 PF02798 Glutathione S-transferase, N-terminal domain CEQ20_20730 PF01380 SIS domain CEQ20_20730 PF00571 CBS domain CEQ20_20735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_20735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_20745 PF02653 Branched-chain amino acid transport system / permease component CEQ20_20750 PF00005 ABC transporter CEQ20_20760 PF03279 Bacterial lipid A biosynthesis acyltransferase CEQ20_20770 PF00999 Sodium/hydrogen exchanger family CEQ20_20775 PF00860 Permease family CEQ20_20780 PF04221 RelB antitoxin CEQ20_20815 PF10548 P22AR C-terminal domain CEQ20_20815 PF08346 AntA/AntB antirepressor CEQ20_20845 PF05638 Type VI secretion system effector, Hcp CEQ20_20870 PF01926 50S ribosome-binding GTPase CEQ20_20870 PF01018 GTP1/OBG CEQ20_20875 PF00672 HAMP domain CEQ20_20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_20875 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_20880 PF00072 Response regulator receiver domain CEQ20_20880 PF00486 Transcriptional regulatory protein, C terminal CEQ20_20885 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEQ20_20890 PF03449 Transcription elongation factor, N-terminal CEQ20_20890 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ20_20895 PF01985 CRS1 / YhbY (CRM) domain CEQ20_20900 PF01728 FtsJ-like methyltransferase CEQ20_20905 PF17862 AAA+ lid domain CEQ20_20905 PF06480 FtsH Extracellular CEQ20_20905 PF01434 Peptidase family M41 CEQ20_20905 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_20910 PF00809 Pterin binding enzyme CEQ20_20915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ20_20915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ20_20915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ20_20915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ20_20920 PF03840 Preprotein translocase SecG subunit CEQ20_20935 PF17384 RimP C-terminal SH3 domain CEQ20_20935 PF02576 RimP N-terminal domain CEQ20_20940 PF00575 S1 RNA binding domain CEQ20_20940 PF08529 NusA N-terminal domain CEQ20_20940 PF13184 NusA-like KH domain CEQ20_20945 PF03144 Elongation factor Tu domain 2 CEQ20_20945 PF04760 Translation initiation factor IF-2, N-terminal region CEQ20_20945 PF08364 Bacterial translation initiation factor IF-2 associated region CEQ20_20945 PF11987 Translation-initiation factor 2 CEQ20_20945 PF00009 Elongation factor Tu GTP binding domain CEQ20_20950 PF02033 Ribosome-binding factor A CEQ20_20955 PF09157 Pseudouridine synthase II TruB, C-terminal CEQ20_20955 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEQ20_20955 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEQ20_20960 PF00312 Ribosomal protein S15 CEQ20_20965 PF00575 S1 RNA binding domain CEQ20_20965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEQ20_20965 PF03725 3' exoribonuclease family, domain 2 CEQ20_20965 PF01138 3' exoribonuclease family, domain 1 CEQ20_20965 PF00013 KH domain CEQ20_20970 PF07719 Tetratricopeptide repeat CEQ20_20970 PF13181 Tetratricopeptide repeat CEQ20_20980 PF03880 DbpA RNA binding domain CEQ20_20980 PF00270 DEAD/DEAH box helicase CEQ20_20980 PF12343 Cold shock protein DEAD box A CEQ20_20980 PF00271 Helicase conserved C-terminal domain CEQ20_20990 PF00296 Luciferase-like monooxygenase CEQ20_20995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_20995 PF00529 HlyD membrane-fusion protein of T1SS CEQ20_21000 PF00873 AcrB/AcrD/AcrF family CEQ20_21005 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEQ20_21005 PF02321 Outer membrane efflux protein CEQ20_21030 PF13508 Acetyltransferase (GNAT) domain CEQ20_21035 PF01541 GIY-YIG catalytic domain CEQ20_21050 PF13416 Bacterial extracellular solute-binding protein CEQ20_21060 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_21065 PF17912 MalK OB fold domain CEQ20_21065 PF00005 ABC transporter CEQ20_21065 PF03459 TOBE domain CEQ20_21080 PF13460 NAD(P)H-binding CEQ20_21085 PF12706 Beta-lactamase superfamily domain CEQ20_21095 PF07969 Amidohydrolase family CEQ20_21100 PF00005 ABC transporter CEQ20_21105 PF00005 ABC transporter CEQ20_21110 PF06007 Phosphonate metabolism protein PhnJ CEQ20_21120 PF05845 Bacterial phosphonate metabolism protein (PhnH) CEQ20_21125 PF06754 Phosphonate metabolism protein PhnG CEQ20_21130 PF00392 Bacterial regulatory proteins, gntR family CEQ20_21130 PF07702 UTRA domain CEQ20_21140 PF03477 ATP cone domain CEQ20_21140 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEQ20_21145 PF00005 ABC transporter CEQ20_21145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_21150 PF00005 ABC transporter CEQ20_21150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ20_21155 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_21155 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ20_21160 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_21170 PF04074 YhcH/YjgK/YiaL CEQ20_21175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ20_21175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ20_21180 PF06877 Regulator of ribonuclease activity B CEQ20_21185 PF00583 Acetyltransferase (GNAT) family CEQ20_21190 PF08264 Anticodon-binding domain of tRNA CEQ20_21190 PF10458 Valyl tRNA synthetase tRNA binding arm CEQ20_21190 PF00133 tRNA synthetases class I (I, L, M and V) CEQ20_21195 PF04364 DNA polymerase III chi subunit, HolC CEQ20_21200 PF02789 Cytosol aminopeptidase family, N-terminal domain CEQ20_21200 PF00883 Cytosol aminopeptidase family, catalytic domain CEQ20_21205 PF03739 Lipopolysaccharide export system permease LptF/LptG CEQ20_21210 PF03739 Lipopolysaccharide export system permease LptF/LptG CEQ20_21220 PF13356 Arm DNA-binding domain CEQ20_21220 PF00589 Phage integrase family CEQ20_21275 PF08220 DeoR-like helix-turn-helix domain CEQ20_21275 PF13280 WYL domain CEQ20_21280 PF01926 50S ribosome-binding GTPase CEQ20_21305 PF06067 Domain of unknown function (DUF932) CEQ20_21315 PF03230 Antirestriction protein CEQ20_21320 PF04002 RadC-like JAB domain CEQ20_21325 PF06174 Protein of unknown function (DUF987) CEQ20_21330 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CEQ20_21335 PF06755 CbtA_toxin of type IV toxin-antitoxin system CEQ20_21360 PF13356 Arm DNA-binding domain CEQ20_21360 PF00589 Phage integrase family CEQ20_21365 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ20_21365 PF12008 Type I restriction and modification enzyme - subunit R C terminal CEQ20_21365 PF18766 SWI2/SNF2 ATPase CEQ20_21375 PF02384 N-6 DNA Methylase CEQ20_21375 PF12161 HsdM N-terminal domain CEQ20_21385 PF05987 Bacterial protein of unknown function (DUF898) CEQ20_21395 PF12833 Helix-turn-helix domain CEQ20_21400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ20_21405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ20_21415 PF05524 PEP-utilising enzyme, N-terminal CEQ20_21415 PF00391 PEP-utilising enzyme, mobile domain CEQ20_21415 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ20_21415 PF00381 PTS HPr component phosphorylation site CEQ20_21415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ20_21420 PF10696 Protein of unknown function (DUF2501) CEQ20_21425 PF03992 Antibiotic biosynthesis monooxygenase CEQ20_21430 PF01791 DeoC/LacD family aldolase CEQ20_21435 PF13407 Periplasmic binding protein domain CEQ20_21440 PF02653 Branched-chain amino acid transport system / permease component CEQ20_21445 PF02653 Branched-chain amino acid transport system / permease component CEQ20_21450 PF00005 ABC transporter CEQ20_21460 PF04198 Putative sugar-binding domain CEQ20_21460 PF00325 Bacterial regulatory proteins, crp family CEQ20_21465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ20_21465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ20_21470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ20_21485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEQ20_21485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEQ20_21485 PF02770 Acyl-CoA dehydrogenase, middle domain CEQ20_21500 PF00899 ThiF family CEQ20_21500 PF00581 Rhodanese-like domain CEQ20_21520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ20_21525 PF00873 AcrB/AcrD/AcrF family CEQ20_21550 PF01095 Pectinesterase CEQ20_21555 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_21560 PF07256 Protein of unknown function (DUF1435) CEQ20_21580 PF05175 Methyltransferase small domain CEQ20_21580 PF08468 Methyltransferase small domain N-terminal CEQ20_21585 PF03603 DNA polymerase III psi subunit CEQ20_21590 PF00583 Acetyltransferase (GNAT) family CEQ20_21595 PF16658 Class II release factor RF3, C-terminal domain CEQ20_21595 PF03144 Elongation factor Tu domain 2 CEQ20_21595 PF00009 Elongation factor Tu GTP binding domain CEQ20_21600 PF04972 BON domain CEQ20_21605 PF07043 Protein of unknown function (DUF1328) CEQ20_21610 PF01734 Patatin-like phospholipase CEQ20_21615 PF01026 TatD related DNase CEQ20_21620 PF01773 Na+ dependent nucleoside transporter N-terminus CEQ20_21620 PF07670 Nucleoside recognition CEQ20_21620 PF07662 Na+ dependent nucleoside transporter C-terminus CEQ20_21630 PF01791 DeoC/LacD family aldolase CEQ20_21635 PF02885 Glycosyl transferase family, helical bundle domain CEQ20_21635 PF00591 Glycosyl transferase family, a/b domain CEQ20_21635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEQ20_21640 PF01676 Metalloenzyme superfamily CEQ20_21645 PF01048 Phosphorylase superfamily CEQ20_21650 PF10144 Bacterial virulence factor haemolysin CEQ20_21655 PF18429 Domain of unknown function (DUF5609) CEQ20_21660 PF18073 Rubredoxin metal binding domain CEQ20_21665 PF01381 Helix-turn-helix CEQ20_21665 PF13521 AAA domain CEQ20_21675 PF12848 ABC transporter CEQ20_21675 PF00005 ABC transporter CEQ20_21680 PF00691 OmpA family CEQ20_21685 PF00990 Diguanylate cyclase, GGDEF domain CEQ20_21685 PF17152 Periplasmic sensor domain CEQ20_21695 PF00690 Cation transporter/ATPase, N-terminus CEQ20_21695 PF00689 Cation transporting ATPase, C-terminus CEQ20_21700 PF01464 Transglycosylase SLT domain CEQ20_21700 PF14718 Soluble lytic murein transglycosylase L domain CEQ20_21705 PF01371 Trp repressor protein CEQ20_21710 PF01931 Protein of unknown function DUF84 CEQ20_21715 PF00300 Histidine phosphatase superfamily (branch 1) CEQ20_21720 PF06445 GyrI-like small molecule binding domain CEQ20_21720 PF12833 Helix-turn-helix domain CEQ20_21730 PF05981 CreA protein CEQ20_21735 PF00072 Response regulator receiver domain CEQ20_21735 PF00486 Transcriptional regulatory protein, C terminal CEQ20_21740 PF08254 Threonine leader peptide CEQ20_21745 PF13840 ACT domain CEQ20_21745 PF00696 Amino acid kinase family CEQ20_21745 PF01842 ACT domain CEQ20_21745 PF00742 Homoserine dehydrogenase CEQ20_21745 PF03447 Homoserine dehydrogenase, NAD binding domain CEQ20_21750 PF00288 GHMP kinases N terminal domain CEQ20_21750 PF08544 GHMP kinases C terminal CEQ20_21755 PF14821 Threonine synthase N terminus CEQ20_21755 PF00291 Pyridoxal-phosphate dependent enzyme CEQ20_21760 PF03883 Peroxide stress protein YaaA CEQ20_21770 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEQ20_21775 PF00994 Probable molybdopterin binding domain CEQ20_21780 PF07690 Major Facilitator Superfamily CEQ20_21790 PF01184 GPR1/FUN34/yaaH family CEQ20_21795 PF00012 Hsp70 protein CEQ20_21800 PF00684 DnaJ central domain CEQ20_21800 PF00226 DnaJ domain CEQ20_21800 PF01556 DnaJ C terminal domain CEQ20_21805 PF06965 Na+/H+ antiporter 1 CEQ20_21810 PF03466 LysR substrate binding domain CEQ20_21810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_21815 PF01649 Ribosomal protein S20 CEQ20_21830 PF06574 FAD synthetase CEQ20_21830 PF01687 Riboflavin kinase CEQ20_21835 PF08264 Anticodon-binding domain of tRNA CEQ20_21835 PF00133 tRNA synthetases class I (I, L, M and V) CEQ20_21835 PF06827 Zinc finger found in FPG and IleRS CEQ20_21840 PF01252 Signal peptidase (SPase) II CEQ20_21845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ20_21850 PF02401 LytB protein CEQ20_21860 PF01113 Dihydrodipicolinate reductase, N-terminus CEQ20_21860 PF05173 Dihydrodipicolinate reductase, C-terminus CEQ20_21865 PF00117 Glutamine amidotransferase class-I CEQ20_21865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEQ20_21870 PF02142 MGS-like domain CEQ20_21870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEQ20_21870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEQ20_21875 PF01810 LysE type translocator CEQ20_21880 PF06738 Putative threonine/serine exporter CEQ20_21885 PF12821 Threonine/Serine exporter, ThrE CEQ20_21890 PF00186 Dihydrofolate reductase CEQ20_21910 PF00149 Calcineurin-like phosphoesterase CEQ20_21915 PF04379 ApaG domain CEQ20_21920 PF00398 Ribosomal RNA adenine dimethylase CEQ20_21925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEQ20_21930 PF00639 PPIC-type PPIASE domain CEQ20_21930 PF09312 SurA N-terminal domain CEQ20_21935 PF03968 OstA-like protein CEQ20_21935 PF04453 LPS transport system D CEQ20_21940 PF00226 DnaJ domain CEQ20_21940 PF05099 Tellurite resistance protein TerB CEQ20_21945 PF00849 RNA pseudouridylate synthase CEQ20_21990 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ20_21990 PF17871 AAA lid domain CEQ20_21990 PF07724 AAA domain (Cdc48 subfamily) CEQ20_21990 PF00004 ATPase family associated with various cellular activities (AAA) CEQ20_21995 PF04717 Type VI secretion system, phage-baseplate injector CEQ20_22030 PF00691 OmpA family CEQ20_22030 PF05736 OprF membrane domain CEQ20_22045 PF12137 RNA polymerase recycling family C-terminal CEQ20_22045 PF00176 SNF2 family N-terminal domain CEQ20_22045 PF18339 RapA N-terminal Tudor like domain 1 CEQ20_22045 PF18337 RapA N-terminal Tudor like domain CEQ20_22045 PF00271 Helicase conserved C-terminal domain CEQ20_22050 PF03104 DNA polymerase family B, exonuclease domain CEQ20_22050 PF00136 DNA polymerase family B CEQ20_22055 PF09335 SNARE associated Golgi protein CEQ20_22060 PF00005 ABC transporter CEQ20_22065 PF00528 Binding-protein-dependent transport system inner membrane component CEQ20_22085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ20_22085 PF12793 Sugar transport-related sRNA regulator N-term CEQ20_22090 PF07690 Major Facilitator Superfamily CEQ20_22095 PF00694 Aconitase C-terminal domain CEQ20_22100 PF00330 Aconitase family (aconitate hydratase) CEQ20_22105 PF00180 Isocitrate/isopropylmalate dehydrogenase CEQ20_22110 PF00682 HMGL-like CEQ20_22110 PF08502 LeuA allosteric (dimerisation) domain CEQ20_22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ20_22125 PF03466 LysR substrate binding domain CEQ20_22135 PF00501 AMP-binding enzyme CEQ20_22145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ20_22145 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ20_22145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ20_22150 PF10369 Small subunit of acetolactate synthase CEQ20_22160 PF00356 Bacterial regulatory proteins, lacI family CEQ20_22160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ20_22165 PF06610 L-alanine exporter CEQ20_22175 PF02381 MraZ protein, putative antitoxin-like CEQ20_22180 PF01795 MraW methylase family CEQ20_22185 PF04999 Cell division protein FtsL CEQ20_22190 PF00905 Penicillin binding protein transpeptidase domain CEQ20_22190 PF03717 Penicillin-binding Protein dimerisation domain CEQ20_22195 PF08245 Mur ligase middle domain CEQ20_22195 PF02875 Mur ligase family, glutamate ligase domain CEQ20_22195 PF01225 Mur ligase family, catalytic domain CEQ20_22200 PF01225 Mur ligase family, catalytic domain CEQ20_22200 PF02875 Mur ligase family, glutamate ligase domain CEQ20_22200 PF08245 Mur ligase middle domain CEQ20_22205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEQ20_22205 PF00953 Glycosyl transferase family 4 CEQ20_22210 PF02875 Mur ligase family, glutamate ligase domain CEQ20_22210 PF08245 Mur ligase middle domain CEQ20_22215 PF01098 Cell cycle protein CEQ20_22220 PF03033 Glycosyltransferase family 28 N-terminal domain CEQ20_22220 PF04101 Glycosyltransferase family 28 C-terminal domain CEQ20_22225 PF01225 Mur ligase family, catalytic domain CEQ20_22225 PF02875 Mur ligase family, glutamate ligase domain CEQ20_22225 PF08245 Mur ligase middle domain CEQ20_22230 PF01820 D-ala D-ala ligase N-terminus CEQ20_22230 PF07478 D-ala D-ala ligase C-terminus CEQ20_22235 PF08478 POTRA domain, FtsQ-type CEQ20_22235 PF03799 Cell division protein FtsQ CEQ20_22240 PF02491 SHS2 domain inserted in FTSA CEQ20_22245 PF00091 Tubulin/FtsZ family, GTPase domain CEQ20_22245 PF12327 FtsZ family, C-terminal domain CEQ20_22250 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEQ20_22260 PF06558 Secretion monitor precursor protein (SecM) CEQ20_22265 PF07517 SecA DEAD-like domain CEQ20_22265 PF02810 SEC-C motif CEQ20_22265 PF01043 SecA preprotein cross-linking domain CEQ20_22265 PF07516 SecA Wing and Scaffold domain CEQ20_22275 PF00293 NUDIX domain CEQ20_22280 PF03884 DNA gyrase inhibitor YacG CEQ20_22285 PF07072 Cell division protein CEQ20_22290 PF01121 Dephospho-CoA kinase CEQ20_22300 PF00478 IMP dehydrogenase / GMP reductase domain CEQ20_22305 PF00482 Type II secretion system (T2SS), protein F CEQ20_22310 PF00437 Type II/IV secretion system protein CEQ20_22310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEQ20_22315 PF07963 Prokaryotic N-terminal methylation motif CEQ20_22320 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEQ20_22320 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEQ20_22325 PF01510 N-acetylmuramoyl-L-alanine amidase CEQ20_22330 PF17113 Regulatory signalling modulator protein AmpE CEQ20_22335 PF00324 Amino acid permease CEQ20_22345 PF07729 FCD domain CEQ20_22345 PF00392 Bacterial regulatory proteins, gntR family CEQ20_22350 PF17831 Pyruvate dehydrogenase E1 component middle domain CEQ20_22350 PF00456 Transketolase, thiamine diphosphate binding domain CEQ20_22355 PF00364 Biotin-requiring enzyme CEQ20_22355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEQ20_22355 PF02817 e3 binding domain CEQ20_22360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ20_22360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ20_22365 PF00330 Aconitase family (aconitate hydratase) CEQ20_22365 PF06434 Aconitate hydratase 2 N-terminus CEQ20_22365 PF11791 Aconitate B N-terminal domain CEQ20_22370 PF06062 Uncharacterised protein family (UPF0231) CEQ20_22375 PF00892 EamA-like transporter family CEQ20_22380 PF02675 S-adenosylmethionine decarboxylase CEQ20_22385 PF17284 Spermidine synthase tetramerisation domain CEQ20_22390 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CEQ20_22395 PF00394 Multicopper oxidase CEQ20_22395 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEQ20_22395 PF07731 Multicopper oxidase CEQ20_22395 PF07732 Multicopper oxidase CEQ20_22400 PF00156 Phosphoribosyl transferase domain CEQ20_22405 PF00484 Carbonic anhydrase CEQ20_22410 PF00005 ABC transporter CEQ20_22415 PF01061 ABC-2 type transporter CEQ20_22420 PF01522 Polysaccharide deacetylase CEQ20_22425 PF02261 Aspartate decarboxylase CEQ20_22430 PF02569 Pantoate-beta-alanine ligase CEQ20_22435 PF02548 Ketopantoate hydroxymethyltransferase CEQ20_22440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEQ20_22445 PF01743 Poly A polymerase head domain CEQ20_22445 PF12626 Polymerase A arginine-rich C-terminus CEQ20_22445 PF12627 Probable RNA and SrmB- binding site of polymerase A CEQ20_22450 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ20_22460 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEQ20_22470 PF17746 SfsA N-terminal OB domain CEQ20_22470 PF03749 Sugar fermentation stimulation protein RE domain CEQ20_22475 PF02834 LigT like Phosphoesterase CEQ20_22480 PF00270 DEAD/DEAH box helicase CEQ20_22480 PF08482 ATP-dependent helicase C-terminal CEQ20_22480 PF04408 Helicase associated domain (HA2) CEQ20_22480 PF00271 Helicase conserved C-terminal domain CEQ20_22485 PF00905 Penicillin binding protein transpeptidase domain CEQ20_22485 PF14814 Bifunctional transglycosylase second domain CEQ20_22485 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CEQ20_22485 PF00912 Transglycosylase CEQ20_22490 PF00005 ABC transporter CEQ20_22495 PF01497 Periplasmic binding protein CEQ20_22500 PF01032 FecCD transport family CEQ20_22505 PF00202 Aminotransferase class-III CEQ20_22510 PF00654 Voltage gated chloride channel CEQ20_22515 PF01521 Iron-sulphur cluster biosynthesis CEQ20_22520 PF03458 UPF0126 domain CEQ20_22525 PF01497 Periplasmic binding protein CEQ20_22530 PF01048 Phosphorylase superfamily CEQ20_22535 PF13286 Phosphohydrolase-associated domain CEQ20_22535 PF01966 HD domain CEQ20_22540 PF00595 PDZ domain CEQ20_22545 PF00672 HAMP domain CEQ20_22545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEQ20_22545 PF00072 Response regulator receiver domain CEQ20_22545 PF01627 Hpt domain CEQ20_22545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ20_22545 PF00512 His Kinase A (phospho-acceptor) domain CEQ20_22555 PF01938 TRAM domain CEQ20_22555 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ20_22560 PF04607 Region found in RelA / SpoT proteins CEQ20_22560 PF02824 TGS domain CEQ20_22560 PF13291 ACT domain CEQ20_22565 PF03819 MazG nucleotide pyrophosphohydrolase domain CEQ20_22570 PF00117 Glutamine amidotransferase class-I CEQ20_22570 PF06418 CTP synthase N-terminus CEQ20_22575 PF00113 Enolase, C-terminal TIM barrel domain CEQ20_22575 PF03952 Enolase, N-terminal domain CEQ20_22580 PF00080 Copper/zinc superoxide dismutase (SODC) CEQ20_22585 PF04055 Radical SAM superfamily CEQ20_22590 PF01242 6-pyruvoyl tetrahydropterin synthase CEQ20_22595 PF00258 Flavodoxin CEQ20_22595 PF00175 Oxidoreductase NAD-binding domain CEQ20_22595 PF00667 FAD binding domain CEQ20_22600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEQ20_22600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEQ20_22605 PF01507 Phosphoadenosine phosphosulfate reductase family CEQ20_22635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ20_22635 PF14824 Sirohaem biosynthesis protein central CEQ20_22635 PF10414 Sirohaem synthase dimerisation region CEQ20_22640 PF01507 Phosphoadenosine phosphosulfate reductase family CEQ20_22645 PF00009 Elongation factor Tu GTP binding domain CEQ20_22655 PF12084 Protein of unknown function (DUF3561) CEQ20_22660 PF04977 Septum formation initiator CEQ20_22665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEQ20_22670 PF02542 YgbB family CEQ20_22675 PF01142 tRNA pseudouridine synthase D (TruD) CEQ20_22680 PF01975 Survival protein SurE CEQ20_22690 PF01551 Peptidase family M23 CEQ20_22690 PF01476 LysM domain CEQ20_22695 PF04545 Sigma-70, region 4 CEQ20_22695 PF00140 Sigma-70 factor, region 1.2 CEQ20_22695 PF04539 Sigma-70 region 3 CEQ20_22695 PF04542 Sigma-70 region 2 CEQ20_22700 PF00488 MutS domain V CEQ20_22700 PF05192 MutS domain III CEQ20_22700 PF01624 MutS domain I CEQ20_22700 PF05190 MutS family domain IV CEQ20_22700 PF05188 MutS domain II CEQ20_22705 PF02502 Ribose/Galactose Isomerase CEQ20_22710 PF08240 Alcohol dehydrogenase GroES-like domain CEQ20_22710 PF00107 Zinc-binding dehydrogenase CEQ20_22720 PF02733 Dak1 domain CEQ20_22725 PF02734 DAK2 domain CEQ20_22730 PF04198 Putative sugar-binding domain CEQ20_22730 PF13936 Helix-turn-helix domain CEQ20_22735 PF02040 Arsenical pump membrane protein CEQ20_22740 PF01022 Bacterial regulatory protein, arsR family CEQ20_22755 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ20_22760 PF14376 Haem-binding domain CEQ20_22760 PF03150 Di-haem cytochrome c peroxidase CEQ20_22760 PF00034 Cytochrome c CEQ20_22770 PF00593 TonB dependent receptor CEQ20_22770 PF07715 TonB-dependent Receptor Plug Domain CEQ20_22780 PF00557 Metallopeptidase family M24