locus-tag class description DN756_00005 PF08299 Bacterial dnaA protein helix-turn-helix DN756_00005 PF11638 DnaA N-terminal domain DN756_00005 PF00308 Bacterial dnaA protein DN756_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN756_00010 PF02767 DNA polymerase III beta subunit, central domain DN756_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN756_00020 PF02463 RecF/RecN/SMC N terminal domain DN756_00025 PF01751 Toprim domain DN756_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_00025 PF18053 DNA gyrase B subunit insert domain DN756_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN756_00025 PF00204 DNA gyrase B DN756_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN756_00045 PF13291 ACT domain DN756_00045 PF00291 Pyridoxal-phosphate dependent enzyme DN756_00050 PF12566 Protein of unknown function (DUF3748) DN756_00050 PF07676 WD40-like Beta Propeller Repeat DN756_00055 PF07119 Protein of unknown function (DUF1375) DN756_00060 PF00011 Hsp20/alpha crystallin family DN756_00065 PF00011 Hsp20/alpha crystallin family DN756_00070 PF02080 TrkA-C domain DN756_00070 PF06826 Predicted Permease Membrane Region DN756_00075 PF00155 Aminotransferase class I and II DN756_00095 PF00128 Alpha amylase, catalytic domain DN756_00100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_00100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_00115 PF13488 Glycine zipper DN756_00115 PF00691 OmpA family DN756_00125 PF03352 Methyladenine glycosylase DN756_00135 PF02091 Glycyl-tRNA synthetase alpha subunit DN756_00140 PF02092 Glycyl-tRNA synthetase beta subunit DN756_00140 PF05746 DALR anticodon binding domain DN756_00150 PF11254 Protein of unknown function (DUF3053) DN756_00155 PF02378 Phosphotransferase system, EIIC DN756_00155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN756_00155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN756_00160 PF08125 Mannitol dehydrogenase C-terminal domain DN756_00160 PF01232 Mannitol dehydrogenase Rossmann domain DN756_00165 PF05068 Mannitol repressor DN756_00170 PF10928 Protein of unknown function (DUF2810) DN756_00185 PF00672 HAMP domain DN756_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_00185 PF02203 Tar ligand binding domain homologue DN756_00190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN756_00190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN756_00195 PF02634 FdhD/NarQ family DN756_00200 PF01568 Molydopterin dinucleotide binding domain DN756_00200 PF00384 Molybdopterin oxidoreductase DN756_00200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_00205 PF01568 Molydopterin dinucleotide binding domain DN756_00205 PF00384 Molybdopterin oxidoreductase DN756_00205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_00210 PF13247 4Fe-4S dicluster domain DN756_00210 PF09163 Formate dehydrogenase N, transmembrane DN756_00215 PF01292 Prokaryotic cytochrome b561 DN756_00220 PF04216 Protein involved in formate dehydrogenase formation DN756_00225 PF12390 Selenocysteine synthase N terminal DN756_00225 PF03841 L-seryl-tRNA selenium transferase DN756_00230 PF00009 Elongation factor Tu GTP binding domain DN756_00230 PF09107 Elongation factor SelB, winged helix DN756_00230 PF09106 Elongation factor SelB, winged helix DN756_00230 PF03144 Elongation factor Tu domain 2 DN756_00260 PF07690 Major Facilitator Superfamily DN756_00275 PF01757 Acyltransferase family DN756_00280 PF00419 Fimbrial protein DN756_00285 PF13954 PapC N-terminal domain DN756_00285 PF13953 PapC C-terminal domain DN756_00285 PF00577 Outer membrane usher protein DN756_00290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_00290 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_00300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_00300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_00310 PF13407 Periplasmic binding protein domain DN756_00315 PF00005 ABC transporter DN756_00320 PF02653 Branched-chain amino acid transport system / permease component DN756_00325 PF12833 Helix-turn-helix domain DN756_00330 PF14659 Phage integrase, N-terminal SAM-like domain DN756_00330 PF13356 Arm DNA-binding domain DN756_00330 PF00589 Phage integrase family DN756_00360 PF00005 ABC transporter DN756_00365 PF01032 FecCD transport family DN756_00370 PF01032 FecCD transport family DN756_00375 PF01497 Periplasmic binding protein DN756_00390 PF00156 Phosphoribosyl transferase domain DN756_00400 PF01175 Urocanase Rossmann-like domain DN756_00400 PF17392 Urocanase C-terminal domain DN756_00400 PF17391 Urocanase N-terminal domain DN756_00405 PF00221 Aromatic amino acid lyase DN756_00410 PF00324 Amino acid permease DN756_00415 PF12146 Serine aminopeptidase, S33 DN756_00420 PF08019 Phosphoethanolamine transferase EptA/EptB DN756_00420 PF00884 Sulfatase DN756_00425 PF00072 Response regulator receiver domain DN756_00425 PF00196 Bacterial regulatory proteins, luxR family DN756_00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_00430 PF05231 MASE1 DN756_00430 PF07730 Histidine kinase DN756_00435 PF07690 Major Facilitator Superfamily DN756_00445 PF13332 Hemagglutinin repeat DN756_00445 PF05594 Haemagluttinin repeat DN756_00445 PF04829 Pre-toxin domain with VENN motif DN756_00445 PF05860 haemagglutination activity domain DN756_00450 PF08479 POTRA domain, ShlB-type DN756_00450 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DN756_00450 PF17287 POTRA domain DN756_00460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_00465 PF00528 Binding-protein-dependent transport system inner membrane component DN756_00470 PF00528 Binding-protein-dependent transport system inner membrane component DN756_00470 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_00475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_00475 PF00005 ABC transporter DN756_00480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_00480 PF00005 ABC transporter DN756_00485 PF01270 Glycosyl hydrolases family 8 DN756_00490 PF00672 HAMP domain DN756_00490 PF00990 Diguanylate cyclase, GGDEF domain DN756_00490 PF00563 EAL domain DN756_00490 PF17154 Gammaproteobacterial periplasmic sensor domain DN756_00495 PF06178 Oligogalacturonate-specific porin protein (KdgM) DN756_00500 PF06917 Periplasmic pectate lyase DN756_00510 PF00375 Sodium:dicarboxylate symporter family DN756_00515 PF00675 Insulinase (Peptidase family M16) DN756_00515 PF05193 Peptidase M16 inactive domain DN756_00520 PF00294 pfkB family carbohydrate kinase DN756_00525 PF01361 Tautomerase enzyme DN756_00530 PF00563 EAL domain DN756_00535 PF05170 AsmA family DN756_00540 PF02611 CDP-diacylglycerol pyrophosphatase DN756_00545 PF03631 Virulence factor BrkB DN756_00570 PF02595 Glycerate kinase family DN756_00575 PF02447 GntP family permease DN756_00585 PF17853 GGDEF-like domain DN756_00585 PF05651 Putative sugar diacid recognition DN756_00585 PF13556 PucR C-terminal helix-turn-helix domain DN756_00590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN756_00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_00595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DN756_00600 PF01432 Peptidase family M3 DN756_00605 PF04445 Putative SAM-dependent methyltransferase DN756_00610 PF08548 Peptidase M10 serralysin C terminal DN756_00610 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DN756_00610 PF00413 Matrixin DN756_00615 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN756_00615 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN756_00620 PF00582 Universal stress protein family DN756_00625 PF10625 Universal stress protein B (UspB) DN756_00630 PF01384 Phosphate transporter family DN756_00640 PF00512 His Kinase A (phospho-acceptor) domain DN756_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_00640 PF00072 Response regulator receiver domain DN756_00640 PF13188 PAS domain DN756_00640 PF08448 PAS fold DN756_00645 PF00005 ABC transporter DN756_00650 PF02653 Branched-chain amino acid transport system / permease component DN756_00655 PF13407 Periplasmic binding protein domain DN756_00665 PF01116 Fructose-bisphosphate aldolase class-II DN756_00675 PF00486 Transcriptional regulatory protein, C terminal DN756_00675 PF00072 Response regulator receiver domain DN756_00690 PF02678 Pirin DN756_00690 PF17954 Quercetinase C-terminal cupin domain DN756_00695 PF00356 Bacterial regulatory proteins, lacI family DN756_00695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_00700 PF02447 GntP family permease DN756_00705 PF01202 Shikimate kinase DN756_00725 PF01914 MarC family integral membrane protein DN756_00730 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN756_00730 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN756_00750 PF07979 Intimin C-type lectin domain DN756_00750 PF02369 Bacterial Ig-like domain (group 1) DN756_00750 PF09134 Invasin, domain 3 DN756_00750 PF11924 Inverse autotransporter, beta-domain DN756_00755 PF07694 5TMR of 5TMR-LYT DN756_00755 PF06580 Histidine kinase DN756_00760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN756_00760 PF02806 Alpha amylase, C-terminal all-beta domain DN756_00760 PF00128 Alpha amylase, catalytic domain DN756_00765 PF18390 Glycogen debranching enzyme C-terminal domain DN756_00765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN756_00765 PF00128 Alpha amylase, catalytic domain DN756_00770 PF00483 Nucleotidyl transferase DN756_00775 PF08323 Starch synthase catalytic domain DN756_00775 PF00534 Glycosyl transferases group 1 DN756_00780 PF00343 Carbohydrate phosphorylase DN756_00785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN756_00785 PF01266 FAD dependent oxidoreductase DN756_00815 PF08220 DeoR-like helix-turn-helix domain DN756_00815 PF00455 DeoR C terminal sensor domain DN756_00820 PF01694 Rhomboid family DN756_00820 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DN756_00825 PF00581 Rhodanese-like domain DN756_00830 PF00196 Bacterial regulatory proteins, luxR family DN756_00830 PF17874 MalT-like TPR region DN756_00835 PF00343 Carbohydrate phosphorylase DN756_00840 PF02446 4-alpha-glucanotransferase DN756_00845 PF01521 Iron-sulphur cluster biosynthesis DN756_00845 PF01106 NifU-like domain DN756_00850 PF00156 Phosphoribosyl transferase domain DN756_00855 PF00561 alpha/beta hydrolase fold DN756_00860 PF07338 Protein of unknown function (DUF1471) DN756_00865 PF09012 FeoC like transcriptional regulator DN756_00870 PF07664 Ferrous iron transport protein B C terminus DN756_00870 PF17910 FeoB cytosolic helical domain DN756_00870 PF02421 Ferrous iron transport protein B DN756_00870 PF07670 Nucleoside recognition DN756_00875 PF04023 FeoA domain DN756_00880 PF17674 HHH domain DN756_00880 PF00575 S1 RNA binding domain DN756_00880 PF09371 Tex-like protein N-terminal domain DN756_00880 PF16921 Tex protein YqgF-like domain DN756_00885 PF03449 Transcription elongation factor, N-terminal DN756_00885 PF01272 Transcription elongation factor, GreA/GreB, C-term DN756_00890 PF00486 Transcriptional regulatory protein, C terminal DN756_00890 PF00072 Response regulator receiver domain DN756_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_00895 PF00672 HAMP domain DN756_00895 PF00512 His Kinase A (phospho-acceptor) domain DN756_00900 PF01293 Phosphoenolpyruvate carboxykinase DN756_00905 PF01430 Hsp33 protein DN756_00910 PF01479 S4 domain DN756_00915 PF13419 Haloacid dehalogenase-like hydrolase DN756_00920 PF07095 Intracellular growth attenuator protein IgaA DN756_00925 PF00293 NUDIX domain DN756_00935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DN756_01010 PF00182 Chitinase class I DN756_01025 PF06252 Protein of unknown function (DUF1018) DN756_01100 PF13693 Winged helix-turn-helix DNA-binding DN756_01110 PF00912 Transglycosylase DN756_01110 PF00905 Penicillin binding protein transpeptidase domain DN756_01110 PF17092 Penicillin-binding protein OB-like domain DN756_01140 PF03958 Bacterial type II/III secretion system short domain DN756_01140 PF00263 Bacterial type II and III secretion system protein DN756_01145 PF01202 Shikimate kinase DN756_01150 PF01761 3-dehydroquinate synthase DN756_01155 PF05036 Sporulation related domain DN756_01160 PF02086 D12 class N6 adenine-specific DNA methyltransferase DN756_01170 PF00834 Ribulose-phosphate 3 epimerase family DN756_01175 PF13419 Haloacid dehalogenase-like hydrolase DN756_01180 PF00579 tRNA synthetases class I (W and Y) DN756_01185 PF10414 Sirohaem synthase dimerisation region DN756_01185 PF14824 Sirohaem biosynthesis protein central DN756_01185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN756_01190 PF01226 Formate/nitrite transporter DN756_01195 PF13806 Rieske-like [2Fe-2S] domain DN756_01200 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN756_01200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_01200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN756_01200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN756_01200 PF04324 BFD-like [2Fe-2S] binding domain DN756_01205 PF07969 Amidohydrolase family DN756_01210 PF07690 Major Facilitator Superfamily DN756_01220 PF00356 Bacterial regulatory proteins, lacI family DN756_01225 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN756_01225 PF02056 Family 4 glycosyl hydrolase DN756_01230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN756_01235 PF05872 Bacterial protein of unknown function (DUF853) DN756_01240 PF00117 Glutamine amidotransferase class-I DN756_01245 PF00202 Aminotransferase class-III DN756_01250 PF12805 FUSC-like inner membrane protein yccS DN756_01255 PF00027 Cyclic nucleotide-binding domain DN756_01255 PF13545 Crp-like helix-turn-helix domain DN756_01260 PF02566 OsmC-like protein DN756_01265 PF05638 Type VI secretion system effector, Hcp DN756_01280 PF00485 Phosphoribulokinase / Uridine kinase family DN756_01285 PF06794 Uncharacterised protein family (UPF0270) DN756_01290 PF00561 alpha/beta hydrolase fold DN756_01295 PF01810 LysE type translocator DN756_01300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN756_01305 PF00005 ABC transporter DN756_01310 PF00528 Binding-protein-dependent transport system inner membrane component DN756_01315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DN756_01325 PF00535 Glycosyl transferase family 2 DN756_01330 PF12848 ABC transporter DN756_01330 PF00005 ABC transporter DN756_01335 PF02525 Flavodoxin-like fold DN756_01340 PF02254 TrkA-N domain DN756_01340 PF00999 Sodium/hydrogen exchanger family DN756_01345 PF09526 Probable metal-binding protein (DUF2387) DN756_01350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN756_01360 PF04102 SlyX DN756_01365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN756_01365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DN756_01370 PF13309 HTH domain DN756_01370 PF08348 YheO-like PAS domain DN756_01375 PF02635 DsrE/DsrF-like family DN756_01380 PF02635 DsrE/DsrF-like family DN756_01385 PF04077 DsrH like protein DN756_01390 PF00164 Ribosomal protein S12/S23 DN756_01395 PF00177 Ribosomal protein S7p/S5e DN756_01400 PF00679 Elongation factor G C-terminus DN756_01400 PF03144 Elongation factor Tu domain 2 DN756_01400 PF03764 Elongation factor G, domain IV DN756_01400 PF14492 Elongation Factor G, domain II DN756_01400 PF00009 Elongation factor Tu GTP binding domain DN756_01410 PF03143 Elongation factor Tu C-terminal domain DN756_01410 PF03144 Elongation factor Tu domain 2 DN756_01410 PF00009 Elongation factor Tu GTP binding domain DN756_01415 PF01797 Transposase IS200 like DN756_01425 PF04324 BFD-like [2Fe-2S] binding domain DN756_01430 PF00210 Ferritin-like domain DN756_01435 PF00338 Ribosomal protein S10p/S20e DN756_01440 PF00297 Ribosomal protein L3 DN756_01445 PF00573 Ribosomal protein L4/L1 family DN756_01450 PF00276 Ribosomal protein L23 DN756_01455 PF03947 Ribosomal Proteins L2, C-terminal domain DN756_01455 PF00181 Ribosomal Proteins L2, RNA binding domain DN756_01460 PF00203 Ribosomal protein S19 DN756_01465 PF00237 Ribosomal protein L22p/L17e DN756_01470 PF00189 Ribosomal protein S3, C-terminal domain DN756_01470 PF07650 KH domain DN756_01475 PF00252 Ribosomal protein L16p/L10e DN756_01480 PF00831 Ribosomal L29 protein DN756_01485 PF00366 Ribosomal protein S17 DN756_01490 PF00238 Ribosomal protein L14p/L23e DN756_01495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN756_01495 PF00467 KOW motif DN756_01500 PF00281 Ribosomal protein L5 DN756_01500 PF00673 ribosomal L5P family C-terminus DN756_01505 PF00253 Ribosomal protein S14p/S29e DN756_01510 PF00410 Ribosomal protein S8 DN756_01515 PF00347 Ribosomal protein L6 DN756_01520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN756_01525 PF00333 Ribosomal protein S5, N-terminal domain DN756_01525 PF03719 Ribosomal protein S5, C-terminal domain DN756_01530 PF00327 Ribosomal protein L30p/L7e DN756_01535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN756_01540 PF00344 SecY translocase DN756_01545 PF00444 Ribosomal protein L36 DN756_01550 PF00416 Ribosomal protein S13/S18 DN756_01555 PF00411 Ribosomal protein S11 DN756_01560 PF00163 Ribosomal protein S4/S9 N-terminal domain DN756_01560 PF01479 S4 domain DN756_01565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN756_01565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN756_01565 PF01000 RNA polymerase Rpb3/RpoA insert domain DN756_01570 PF01196 Ribosomal protein L17 DN756_01575 PF13411 MerR HTH family regulatory protein DN756_01580 PF03889 Alternative ribosome-rescue factor A DN756_01585 PF01741 Large-conductance mechanosensitive channel, MscL DN756_01590 PF02254 TrkA-N domain DN756_01590 PF02080 TrkA-C domain DN756_01595 PF01029 NusB family DN756_01595 PF01189 16S rRNA methyltransferase RsmB/F DN756_01600 PF02911 Formyl transferase, C-terminal domain DN756_01600 PF00551 Formyl transferase DN756_01605 PF01327 Polypeptide deformylase DN756_01610 PF02481 DNA recombination-mediator protein A DN756_01610 PF17782 DprA winged helix domain DN756_01615 PF04361 Protein of unknown function (DUF494) DN756_01620 PF01396 Topoisomerase DNA binding C4 zinc finger DN756_01625 PF01300 Telomere recombination DN756_01630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN756_01630 PF01488 Shikimate / quinate 5-dehydrogenase DN756_01630 PF08501 Shikimate dehydrogenase substrate binding domain DN756_01635 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_01670 PF01565 FAD binding domain DN756_01670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN756_01675 PF02237 Biotin protein ligase C terminal domain DN756_01675 PF03099 Biotin/lipoate A/B protein ligase family DN756_01675 PF08279 HTH domain DN756_01680 PF00485 Phosphoribulokinase / Uridine kinase family DN756_01685 PF13673 Acetyltransferase (GNAT) domain DN756_01710 PF03144 Elongation factor Tu domain 2 DN756_01710 PF03143 Elongation factor Tu C-terminal domain DN756_01710 PF00009 Elongation factor Tu GTP binding domain DN756_01715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN756_01720 PF02357 Transcription termination factor nusG DN756_01720 PF00467 KOW motif DN756_01725 PF00298 Ribosomal protein L11, RNA binding domain DN756_01725 PF03946 Ribosomal protein L11, N-terminal domain DN756_01730 PF00687 Ribosomal protein L1p/L10e family DN756_01735 PF00466 Ribosomal protein L10 DN756_01740 PF16320 Ribosomal protein L7/L12 dimerisation domain DN756_01740 PF00542 Ribosomal protein L7/L12 C-terminal domain DN756_01745 PF04565 RNA polymerase Rpb2, domain 3 DN756_01745 PF04561 RNA polymerase Rpb2, domain 2 DN756_01745 PF00562 RNA polymerase Rpb2, domain 6 DN756_01745 PF04563 RNA polymerase beta subunit DN756_01745 PF04560 RNA polymerase Rpb2, domain 7 DN756_01745 PF10385 RNA polymerase beta subunit external 1 domain DN756_01750 PF04998 RNA polymerase Rpb1, domain 5 DN756_01750 PF05000 RNA polymerase Rpb1, domain 4 DN756_01750 PF04983 RNA polymerase Rpb1, domain 3 DN756_01750 PF00623 RNA polymerase Rpb1, domain 2 DN756_01750 PF04997 RNA polymerase Rpb1, domain 1 DN756_01760 PF04055 Radical SAM superfamily DN756_01760 PF06968 Biotin and Thiamin Synthesis associated domain DN756_01765 PF05690 Thiazole biosynthesis protein ThiG DN756_01775 PF00899 ThiF family DN756_01780 PF02581 Thiamine monophosphate synthase DN756_01785 PF01964 Radical SAM ThiC family DN756_01785 PF13667 ThiC-associated domain DN756_01790 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DN756_01795 PF09297 NADH pyrophosphatase zinc ribbon domain DN756_01795 PF00293 NUDIX domain DN756_01805 PF01208 Uroporphyrinogen decarboxylase (URO-D) DN756_01810 PF04493 Endonuclease V DN756_01815 PF04222 Protein of unknown function (DUF416) DN756_01820 PF00216 Bacterial DNA-binding protein DN756_01825 PF07356 Protein of unknown function (DUF1481) DN756_01830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN756_01830 PF02843 Phosphoribosylglycinamide synthetase, C domain DN756_01830 PF02844 Phosphoribosylglycinamide synthetase, N domain DN756_01835 PF02142 MGS-like domain DN756_01835 PF01808 AICARFT/IMPCHase bienzyme DN756_01885 PF04204 Homoserine O-succinyltransferase DN756_01890 PF01274 Malate synthase DN756_01895 PF00463 Isocitrate lyase family DN756_01900 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DN756_01905 PF01614 Bacterial transcriptional regulator DN756_01905 PF09339 IclR helix-turn-helix domain DN756_01910 PF02310 B12 binding domain DN756_01910 PF02607 B12 binding domain DN756_01910 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN756_01910 PF00809 Pterin binding enzyme DN756_01910 PF02574 Homocysteine S-methyltransferase DN756_01920 PF00696 Amino acid kinase family DN756_01920 PF01842 ACT domain DN756_01925 PF00342 Phosphoglucose isomerase DN756_01930 PF06146 Phosphate-starvation-inducible E DN756_01935 PF00528 Binding-protein-dependent transport system inner membrane component DN756_01940 PF14785 Maltose transport system permease protein MalF P2 domain DN756_01940 PF00528 Binding-protein-dependent transport system inner membrane component DN756_01945 PF01547 Bacterial extracellular solute-binding protein DN756_01955 PF17912 MalK OB fold domain DN756_01955 PF00005 ABC transporter DN756_01960 PF02264 LamB porin DN756_01965 PF07148 Maltose operon periplasmic protein precursor (MalM) DN756_01975 PF05638 Type VI secretion system effector, Hcp DN756_02025 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_02025 PF00004 ATPase family associated with various cellular activities (AAA) DN756_02025 PF07724 AAA domain (Cdc48 subfamily) DN756_02025 PF17871 AAA lid domain DN756_02060 PF04717 Type VI secretion system, phage-baseplate injector DN756_02120 PF04717 Type VI secretion system, phage-baseplate injector DN756_02135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN756_02135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_02140 PF12833 Helix-turn-helix domain DN756_02140 PF02311 AraC-like ligand binding domain DN756_02145 PF05025 RbsD / FucU transport protein family DN756_02150 PF00294 pfkB family carbohydrate kinase DN756_02165 PF09084 NMT1/THI5 like DN756_02170 PF00296 Luciferase-like monooxygenase DN756_02175 PF00528 Binding-protein-dependent transport system inner membrane component DN756_02180 PF00005 ABC transporter DN756_02190 PF04221 RelB antitoxin DN756_02195 PF00860 Permease family DN756_02200 PF00872 Transposase, Mutator family DN756_02205 PF00999 Sodium/hydrogen exchanger family DN756_02215 PF03279 Bacterial lipid A biosynthesis acyltransferase DN756_02225 PF00005 ABC transporter DN756_02230 PF02653 Branched-chain amino acid transport system / permease component DN756_02240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_02240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_02245 PF00571 CBS domain DN756_02245 PF01380 SIS domain DN756_02250 PF02798 Glutathione S-transferase, N-terminal domain DN756_02265 PF00313 'Cold-shock' DNA-binding domain DN756_02270 PF00313 'Cold-shock' DNA-binding domain DN756_02275 PF00313 'Cold-shock' DNA-binding domain DN756_02285 PF05433 Glycine zipper 2TM domain DN756_02290 PF00753 Metallo-beta-lactamase superfamily DN756_02295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN756_02295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN756_02300 PF02627 Carboxymuconolactone decarboxylase family DN756_02305 PF07690 Major Facilitator Superfamily DN756_02330 PF02954 Bacterial regulatory protein, Fis family DN756_02335 PF01207 Dihydrouridine synthase (Dus) DN756_02345 PF00474 Sodium:solute symporter family DN756_02350 PF06196 Protein of unknown function (DUF997) DN756_02355 PF02785 Biotin carboxylase C-terminal domain DN756_02355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN756_02355 PF00289 Biotin carboxylase, N-terminal domain DN756_02360 PF00364 Biotin-requiring enzyme DN756_02365 PF01220 Dehydroquinase class II DN756_02370 PF01794 Ferric reductase like transmembrane component DN756_02375 PF00174 Oxidoreductase molybdopterin binding domain DN756_02380 PF00107 Zinc-binding dehydrogenase DN756_02380 PF08240 Alcohol dehydrogenase GroES-like domain DN756_02385 PF17157 Gammaproteobacterial periplasmic sensor domain DN756_02385 PF00563 EAL domain DN756_02385 PF00990 Diguanylate cyclase, GGDEF domain DN756_02395 PF04085 rod shape-determining protein MreC DN756_02400 PF04093 rod shape-determining protein MreD DN756_02405 PF02545 Maf-like protein DN756_02410 PF00575 S1 RNA binding domain DN756_02410 PF10150 Ribonuclease E/G family DN756_02415 PF13116 Protein of unknown function DN756_02415 PF13502 AsmA-like C-terminal region DN756_02420 PF00795 Carbon-nitrogen hydrolase DN756_02425 PF01523 Putative modulator of DNA gyrase DN756_02430 PF14431 YwqJ-like deaminase DN756_02430 PF18807 Tripartite Tc toxins repeat DN756_02450 PF03534 Salmonella virulence plasmid 65kDa B protein DN756_02450 PF12255 Insecticide toxin TcdB middle/C-terminal region DN756_02450 PF12256 Insecticide toxin TcdB middle/N-terminal region DN756_02455 PF18413 Neuraminidase-like domain DN756_02455 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DN756_02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_02465 PF03466 LysR substrate binding domain DN756_02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_02470 PF03466 LysR substrate binding domain DN756_02475 PF07869 Protein of unknown function (DUF1656) DN756_02480 PF13533 Biotin-lipoyl like DN756_02485 PF04632 Fusaric acid resistance protein family DN756_02490 PF00171 Aldehyde dehydrogenase family DN756_02500 PF01337 Barstar (barnase inhibitor) DN756_02505 PF04751 Protein of unknown function (DUF615) DN756_02510 PF01523 Putative modulator of DNA gyrase DN756_02520 PF07361 Cytochrome b562 DN756_02525 PF14760 Rnk N-terminus DN756_02525 PF01272 Transcription elongation factor, GreA/GreB, C-term DN756_02530 PF00128 Alpha amylase, catalytic domain DN756_02530 PF11941 Domain of unknown function (DUF3459) DN756_02535 PF00367 phosphotransferase system, EIIB DN756_02535 PF02378 Phosphotransferase system, EIIC DN756_02540 PF00356 Bacterial regulatory proteins, lacI family DN756_02550 PF01042 Endoribonuclease L-PSP DN756_02555 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DN756_02555 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DN756_02560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN756_02560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN756_02570 PF00381 PTS HPr component phosphorylation site DN756_02575 PF03668 P-loop ATPase protein family DN756_02585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN756_02590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN756_02595 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN756_02595 PF04963 Sigma-54 factor, core binding domain DN756_02595 PF04552 Sigma-54, DNA binding domain DN756_02600 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN756_02600 PF00005 ABC transporter DN756_02605 PF03968 OstA-like protein DN756_02610 PF06835 Lipopolysaccharide-assembly, LptC-related DN756_02620 PF01380 SIS domain DN756_02620 PF00571 CBS domain DN756_02625 PF01699 Sodium/calcium exchanger protein DN756_02630 PF00005 ABC transporter DN756_02635 PF02405 Permease MlaE DN756_02640 PF02470 MlaD protein DN756_02645 PF05494 MlaC protein DN756_02650 PF13466 STAS domain DN756_02655 PF01722 BolA-like protein DN756_02660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN756_02665 PF13180 PDZ domain DN756_02670 PF13180 PDZ domain DN756_02670 PF00595 PDZ domain DN756_02675 PF06295 Protein of unknown function (DUF1043) DN756_02680 PF03969 AFG1-like ATPase DN756_02685 PF00572 Ribosomal protein L13 DN756_02690 PF00380 Ribosomal protein S9/S16 DN756_02700 PF00043 Glutathione S-transferase, C-terminal domain DN756_02700 PF02798 Glutathione S-transferase, N-terminal domain DN756_02705 PF04386 Stringent starvation protein B DN756_02715 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_02715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN756_02720 PF00310 Glutamine amidotransferases class-II DN756_02720 PF04898 Glutamate synthase central domain DN756_02720 PF01645 Conserved region in glutamate synthase DN756_02720 PF01493 GXGXG motif DN756_02725 PF04055 Radical SAM superfamily DN756_02725 PF16199 Radical_SAM C-terminal domain DN756_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_02735 PF00512 His Kinase A (phospho-acceptor) domain DN756_02735 PF18415 Histidine kinase receptor ArcB trans-membrane domain DN756_02735 PF01627 Hpt domain DN756_02735 PF00989 PAS fold DN756_02735 PF00072 Response regulator receiver domain DN756_02750 PF00912 Transglycosylase DN756_02755 PF04972 BON domain DN756_02760 PF13580 SIS domain DN756_02770 PF02021 Uncharacterised protein family UPF0102 DN756_02775 PF04348 LppC putative lipoprotein DN756_02780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN756_02790 PF17954 Quercetinase C-terminal cupin domain DN756_02790 PF02678 Pirin DN756_02795 PF03466 LysR substrate binding domain DN756_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_02805 PF07681 DoxX DN756_02815 PF07332 Putative Actinobacterial Holin-X, holin superfamily III DN756_02820 PF05957 Bacterial protein of unknown function (DUF883) DN756_02835 PF13721 SecD export protein N-terminal TM region DN756_02840 PF09335 SNARE associated Golgi protein DN756_02850 PF07729 FCD domain DN756_02850 PF00392 Bacterial regulatory proteins, gntR family DN756_02855 PF07690 Major Facilitator Superfamily DN756_02860 PF02614 Glucuronate isomerase DN756_02865 PF08125 Mannitol dehydrogenase C-terminal domain DN756_02865 PF01232 Mannitol dehydrogenase Rossmann domain DN756_02870 PF08666 SAF domain DN756_02870 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DN756_02875 PF10688 Bacterial inner membrane protein DN756_02880 PF00375 Sodium:dicarboxylate symporter family DN756_02885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_02890 PF01863 Protein of unknown function DUF45 DN756_02895 PF03797 Autotransporter beta-domain DN756_02900 PF05175 Methyltransferase small domain DN756_02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_02905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN756_02910 PF03729 Short repeat of unknown function (DUF308) DN756_02940 PF02342 TerD domain DN756_02945 PF00092 von Willebrand factor type A domain DN756_02950 PF08479 POTRA domain, ShlB-type DN756_02950 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DN756_02950 PF17287 POTRA domain DN756_02960 PF05860 haemagglutination activity domain DN756_02960 PF13018 Extended Signal Peptide of Type V secretion system DN756_02960 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DN756_02960 PF05594 Haemagluttinin repeat DN756_02960 PF13332 Hemagglutinin repeat DN756_02970 PF04829 Pre-toxin domain with VENN motif DN756_02970 PF13332 Hemagglutinin repeat DN756_02975 PF07262 CDI immunity protein DN756_02980 PF13018 Extended Signal Peptide of Type V secretion system DN756_02980 PF05860 haemagglutination activity domain DN756_02980 PF13332 Hemagglutinin repeat DN756_02980 PF04829 Pre-toxin domain with VENN motif DN756_02990 PF04829 Pre-toxin domain with VENN motif DN756_02990 PF13018 Extended Signal Peptide of Type V secretion system DN756_02990 PF13332 Hemagglutinin repeat DN756_02990 PF05860 haemagglutination activity domain DN756_02995 PF05860 haemagglutination activity domain DN756_02995 PF13332 Hemagglutinin repeat DN756_02995 PF13018 Extended Signal Peptide of Type V secretion system DN756_02995 PF04829 Pre-toxin domain with VENN motif DN756_03010 PF13332 Hemagglutinin repeat DN756_03010 PF05860 haemagglutination activity domain DN756_03010 PF13018 Extended Signal Peptide of Type V secretion system DN756_03010 PF04829 Pre-toxin domain with VENN motif DN756_03015 PF04829 Pre-toxin domain with VENN motif DN756_03015 PF13018 Extended Signal Peptide of Type V secretion system DN756_03015 PF13332 Hemagglutinin repeat DN756_03015 PF05860 haemagglutination activity domain DN756_03035 PF03459 TOBE domain DN756_03035 PF00005 ABC transporter DN756_03035 PF17912 MalK OB fold domain DN756_03040 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DN756_03045 PF00356 Bacterial regulatory proteins, lacI family DN756_03050 PF13416 Bacterial extracellular solute-binding protein DN756_03055 PF00528 Binding-protein-dependent transport system inner membrane component DN756_03060 PF00528 Binding-protein-dependent transport system inner membrane component DN756_03070 PF00933 Glycosyl hydrolase family 3 N terminal domain DN756_03070 PF14310 Fibronectin type III-like domain DN756_03070 PF01915 Glycosyl hydrolase family 3 C-terminal domain DN756_03080 PF04632 Fusaric acid resistance protein family DN756_03085 PF00529 HlyD membrane-fusion protein of T1SS DN756_03085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_03125 PF01042 Endoribonuclease L-PSP DN756_03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_03145 PF03466 LysR substrate binding domain DN756_03155 PF02661 Fic/DOC family DN756_03165 PF05638 Type VI secretion system effector, Hcp DN756_03200 PF10548 P22AR C-terminal domain DN756_03200 PF08346 AntA/AntB antirepressor DN756_03300 PF04539 Sigma-70 region 3 DN756_03300 PF04545 Sigma-70, region 4 DN756_03300 PF04546 Sigma-70, non-essential region DN756_03300 PF04542 Sigma-70 region 2 DN756_03300 PF00140 Sigma-70 factor, region 1.2 DN756_03300 PF03979 Sigma-70 factor, region 1.1 DN756_03305 PF08278 DNA primase DnaG DnaB-binding DN756_03305 PF08275 DNA primase catalytic core, N-terminal domain DN756_03305 PF10410 DnaB-helicase binding domain of primase DN756_03305 PF01807 CHC2 zinc finger DN756_03310 PF01165 Ribosomal protein S21 DN756_03315 PF00814 Glycoprotease family DN756_03320 PF02660 Glycerol-3-phosphate acyltransferase DN756_03325 PF02152 Dihydroneopterin aldolase DN756_03330 PF02673 Bacitracin resistance protein BacA DN756_03335 PF01743 Poly A polymerase head domain DN756_03335 PF12627 Probable RNA and SrmB- binding site of polymerase A DN756_03335 PF01966 HD domain DN756_03340 PF08239 Bacterial SH3 domain DN756_03345 PF01928 CYTH domain DN756_03350 PF08335 GlnD PII-uridylyltransferase DN756_03350 PF03710 Glutamate-ammonia ligase adenylyltransferase DN756_03355 PF00294 pfkB family carbohydrate kinase DN756_03355 PF01467 Cytidylyltransferase-like DN756_03360 PF13520 Amino acid permease DN756_03370 PF04380 Membrane fusogenic activity DN756_03375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN756_03380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN756_03385 PF03738 Glutathionylspermidine synthase preATP-grasp DN756_03390 PF06693 Protein of unknown function (DUF1190) DN756_03400 PF02321 Outer membrane efflux protein DN756_03405 PF00293 NUDIX domain DN756_03410 PF06853 Protein of unknown function (DUF1249) DN756_03415 PF00149 Calcineurin-like phosphoesterase DN756_03420 PF05728 Uncharacterised protein family (UPF0227) DN756_03425 PF00986 DNA gyrase B subunit, carboxyl terminus DN756_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_03425 PF01751 Toprim domain DN756_03425 PF00204 DNA gyrase B DN756_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_03430 PF03466 LysR substrate binding domain DN756_03435 PF02525 Flavodoxin-like fold DN756_03445 PF00521 DNA gyrase/topoisomerase IV, subunit A DN756_03445 PF03989 DNA gyrase C-terminal domain, beta-propeller DN756_03450 PF01553 Acyltransferase DN756_03460 PF07731 Multicopper oxidase DN756_03460 PF07732 Multicopper oxidase DN756_03470 PF04055 Radical SAM superfamily DN756_03470 PF11842 Domain of unknown function (DUF3362) DN756_03470 PF08497 Radical SAM N-terminal DN756_03475 PF00248 Aldo/keto reductase family DN756_03485 PF00465 Iron-containing alcohol dehydrogenase DN756_03490 PF12833 Helix-turn-helix domain DN756_03490 PF06719 AraC-type transcriptional regulator N-terminus DN756_03495 PF09335 SNARE associated Golgi protein DN756_03500 PF01053 Cys/Met metabolism PLP-dependent enzyme DN756_03505 PF01618 MotA/TolQ/ExbB proton channel family DN756_03510 PF02472 Biopolymer transport protein ExbD/TolR DN756_03550 PF00437 Type II/IV secretion system protein DN756_03565 PF00263 Bacterial type II and III secretion system protein DN756_03565 PF04972 BON domain DN756_03565 PF13629 Pilus formation protein N terminal region DN756_03595 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN756_03595 PF18416 N-acetylglucosamine binding protein domain 2 DN756_03600 PF00704 Glycosyl hydrolases family 18 DN756_03605 PF00419 Fimbrial protein DN756_03610 PF13953 PapC C-terminal domain DN756_03610 PF13954 PapC N-terminal domain DN756_03610 PF00577 Outer membrane usher protein DN756_03615 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_03615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_03620 PF00419 Fimbrial protein DN756_03620 PF09222 Fimbrial adhesin F17-AG, lectin domain DN756_03625 PF01497 Periplasmic binding protein DN756_03640 PF00771 FHIPEP family DN756_03645 PF01312 FlhB HrpN YscU SpaS Family DN756_03650 PF01311 Bacterial export proteins, family 1 DN756_03655 PF01313 Bacterial export proteins, family 3 DN756_03660 PF00813 FliP family DN756_03665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN756_03675 PF00158 Sigma-54 interaction domain DN756_03675 PF00072 Response regulator receiver domain DN756_03675 PF02954 Bacterial regulatory protein, Fis family DN756_03680 PF02049 Flagellar hook-basal body complex protein FliE DN756_03685 PF08345 Flagellar M-ring protein C-terminal DN756_03685 PF01514 Secretory protein of YscJ/FliF family DN756_03700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_03700 PF18269 T3SS EscN ATPase C-terminal domain DN756_03720 PF13144 Chaperone for flagella basal body P-ring formation DN756_03725 PF00460 Flagella basal body rod protein DN756_03730 PF00460 Flagella basal body rod protein DN756_03730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_03735 PF03963 Flagellar hook capping protein - N-terminal region DN756_03735 PF13861 FlgD Tudor-like domain DN756_03735 PF13860 FlgD Ig-like domain DN756_03760 PF00669 Bacterial flagellin N-terminal helical region DN756_03760 PF00700 Bacterial flagellin C-terminal helical region DN756_03770 PF00700 Bacterial flagellin C-terminal helical region DN756_03770 PF00669 Bacterial flagellin N-terminal helical region DN756_03785 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN756_03785 PF00691 OmpA family DN756_03805 PF05433 Glycine zipper 2TM domain DN756_03815 PF03707 Bacterial signalling protein N terminal repeat DN756_03815 PF00990 Diguanylate cyclase, GGDEF domain DN756_03815 PF00563 EAL domain DN756_03815 PF13188 PAS domain DN756_03825 PF00529 HlyD membrane-fusion protein of T1SS DN756_03825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_03830 PF00873 AcrB/AcrD/AcrF family DN756_03835 PF07906 ShET2 enterotoxin, N-terminal region DN756_03850 PF03797 Autotransporter beta-domain DN756_03855 PF14496 C-terminal novel E3 ligase, LRR-interacting DN756_03855 PF12468 Type III secretion system leucine rich repeat protein DN756_03865 PF12468 Type III secretion system leucine rich repeat protein DN756_03865 PF14496 C-terminal novel E3 ligase, LRR-interacting DN756_03865 PF12468 Type III secretion system leucine rich repeat protein DN756_03865 PF14496 C-terminal novel E3 ligase, LRR-interacting DN756_03870 PF12468 Type III secretion system leucine rich repeat protein DN756_03870 PF14496 C-terminal novel E3 ligase, LRR-interacting DN756_03885 PF03806 AbgT putative transporter family DN756_03890 PF01546 Peptidase family M20/M25/M40 DN756_03890 PF07687 Peptidase dimerisation domain DN756_03895 PF07715 TonB-dependent Receptor Plug Domain DN756_03895 PF00593 TonB dependent receptor DN756_03900 PF08242 Methyltransferase domain DN756_03900 PF00550 Phosphopantetheine attachment site DN756_03900 PF00668 Condensation domain DN756_03900 PF00501 AMP-binding enzyme DN756_03905 PF08242 Methyltransferase domain DN756_03905 PF00550 Phosphopantetheine attachment site DN756_03905 PF00668 Condensation domain DN756_03905 PF00501 AMP-binding enzyme DN756_03920 PF00975 Thioesterase domain DN756_03930 PF08021 Siderophore-interacting FAD-binding domain DN756_03930 PF00005 ABC transporter DN756_03930 PF04954 Siderophore-interacting protein DN756_03930 PF00664 ABC transporter transmembrane region DN756_03935 PF00005 ABC transporter DN756_03935 PF00664 ABC transporter transmembrane region DN756_03950 PF02447 GntP family permease DN756_03955 PF12951 Passenger-associated-transport-repeat DN756_03960 PF04717 Type VI secretion system, phage-baseplate injector DN756_04035 PF00939 Sodium:sulfate symporter transmembrane region DN756_04040 PF00356 Bacterial regulatory proteins, lacI family DN756_04055 PF07715 TonB-dependent Receptor Plug Domain DN756_04055 PF00593 TonB dependent receptor DN756_04060 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DN756_04065 PF06276 Ferric iron reductase FhuF-like transporter DN756_04065 PF04183 IucA / IucC family DN756_04075 PF06276 Ferric iron reductase FhuF-like transporter DN756_04075 PF04183 IucA / IucC family DN756_04100 PF00196 Bacterial regulatory proteins, luxR family DN756_04100 PF03472 Autoinducer binding domain DN756_04105 PF00765 Autoinducer synthase DN756_04110 PF02517 CPBP intramembrane metalloprotease DN756_04150 PF05736 OprF membrane domain DN756_04150 PF00691 OmpA family DN756_04165 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_04165 PF00004 ATPase family associated with various cellular activities (AAA) DN756_04165 PF07724 AAA domain (Cdc48 subfamily) DN756_04165 PF17871 AAA lid domain DN756_04210 PF01276 Orn/Lys/Arg decarboxylase, major domain DN756_04210 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN756_04210 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DN756_04215 PF13407 Periplasmic binding protein domain DN756_04220 PF00005 ABC transporter DN756_04225 PF02653 Branched-chain amino acid transport system / permease component DN756_04230 PF07715 TonB-dependent Receptor Plug Domain DN756_04240 PF01464 Transglycosylase SLT domain DN756_04240 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DN756_04245 PF04362 Bacterial Fe(2+) trafficking DN756_04250 PF00730 HhH-GPD superfamily base excision DNA repair protein DN756_04250 PF14815 NUDIX domain DN756_04250 PF10576 Iron-sulfur binding domain of endonuclease III DN756_04250 PF00633 Helix-hairpin-helix motif DN756_04255 PF02390 Putative methyltransferase DN756_04260 PF04320 Protein with unknown function (DUF469) DN756_04265 PF04960 Glutaminase DN756_04270 PF11101 Protein of unknown function (DUF2884) DN756_04275 PF11713 Peptidase C80 family DN756_04275 PF11647 Membrane Localization Domain DN756_04275 PF07634 RtxA repeat DN756_04275 PF12146 Serine aminopeptidase, S33 DN756_04275 PF16671 Actin cross-linking domain DN756_04280 PF04055 Radical SAM superfamily DN756_04280 PF06969 HemN C-terminal domain DN756_04285 PF01725 Ham1 family DN756_04290 PF02594 Uncharacterised ACR, YggU family COG1872 DN756_04295 PF02325 YGGT family DN756_04300 PF03807 NADP oxidoreductase coenzyme F420-dependent DN756_04300 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN756_04305 PF01168 Alanine racemase, N-terminal domain DN756_04310 PF00437 Type II/IV secretion system protein DN756_04315 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN756_04320 PF00795 Carbon-nitrogen hydrolase DN756_04325 PF03652 Holliday junction resolvase DN756_04330 PF02622 Uncharacterized ACR, COG1678 DN756_04335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DN756_04335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DN756_04340 PF04452 RNA methyltransferase DN756_04350 PF04231 Endonuclease I DN756_04355 PF10263 SprT-like family DN756_04355 PF17283 SprT-like zinc ribbon domain DN756_04360 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN756_04360 PF02772 S-adenosylmethionine synthetase, central domain DN756_04360 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN756_04365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN756_04365 PF17944 Arginine decarboxylase C-terminal helical extension DN756_04365 PF17810 Arginine decarboxylase helical bundle domain DN756_04375 PF01797 Transposase IS200 like DN756_04385 PF01797 Transposase IS200 like DN756_04390 PF01435 Peptidase family M48 DN756_04395 PF00456 Transketolase, thiamine diphosphate binding domain DN756_04395 PF02779 Transketolase, pyrimidine binding domain DN756_04395 PF02780 Transketolase, C-terminal domain DN756_04400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN756_04400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN756_04405 PF00162 Phosphoglycerate kinase DN756_04410 PF01116 Fructose-bisphosphate aldolase class-II DN756_04420 PF00924 Mechanosensitive ion channel DN756_04420 PF05552 Conserved TM helix DN756_04425 PF01810 LysE type translocator DN756_04430 PF04402 Protein of unknown function (DUF541) DN756_04435 PF03466 LysR substrate binding domain DN756_04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_04440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN756_04445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_04445 PF01842 ACT domain DN756_04445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_04450 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN756_04460 PF05164 Cell division protein ZapA DN756_04470 PF03695 Uncharacterised protein family (UPF0149) DN756_04475 PF00557 Metallopeptidase family M24 DN756_04475 PF05195 Aminopeptidase P, N-terminal domain DN756_04480 PF01494 FAD binding domain DN756_04485 PF01494 FAD binding domain DN756_04495 PF01571 Aminomethyltransferase folate-binding domain DN756_04495 PF08669 Glycine cleavage T-protein C-terminal barrel domain DN756_04500 PF01597 Glycine cleavage H-protein DN756_04505 PF02347 Glycine cleavage system P-protein DN756_04520 PF13018 Extended Signal Peptide of Type V secretion system DN756_04520 PF03895 YadA-like membrane anchor domain DN756_04520 PF05662 Coiled stalk of trimeric autotransporter adhesin DN756_04520 PF05658 Head domain of trimeric autotransporter adhesin DN756_04530 PF03006 Haemolysin-III related DN756_04540 PF01571 Aminomethyltransferase folate-binding domain DN756_04545 PF03937 Flavinator of succinate dehydrogenase DN756_04550 PF07254 Membrane-bound toxin component of toxin-antitoxin system DN756_04555 PF00072 Response regulator receiver domain DN756_04555 PF00486 Transcriptional regulatory protein, C terminal DN756_04560 PF00512 His Kinase A (phospho-acceptor) domain DN756_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_04560 PF00672 HAMP domain DN756_04565 PF06123 Inner membrane protein CreD DN756_04570 PF00258 Flavodoxin DN756_04575 PF00589 Phage integrase family DN756_04575 PF02899 Phage integrase, N-terminal SAM-like domain DN756_04580 PF13098 Thioredoxin-like domain DN756_04580 PF10411 Disulfide bond isomerase protein N-terminus DN756_04585 PF01368 DHH family DN756_04585 PF02272 DHHA1 domain DN756_04585 PF17768 RecJ OB domain DN756_04595 PF01336 OB-fold nucleic acid binding domain DN756_04595 PF00152 tRNA synthetases class II (D, K and N) DN756_04605 PF14659 Phage integrase, N-terminal SAM-like domain DN756_04605 PF13356 Arm DNA-binding domain DN756_04605 PF00589 Phage integrase family DN756_04790 PF03551 Transcriptional regulator PadR-like family DN756_04795 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DN756_04805 PF13407 Periplasmic binding protein domain DN756_04810 PF02653 Branched-chain amino acid transport system / permease component DN756_04815 PF00005 ABC transporter DN756_04820 PF17912 MalK OB fold domain DN756_04820 PF00005 ABC transporter DN756_04825 PF13416 Bacterial extracellular solute-binding protein DN756_04830 PF00528 Binding-protein-dependent transport system inner membrane component DN756_04835 PF00528 Binding-protein-dependent transport system inner membrane component DN756_04840 PF07745 Glycosyl hydrolase family 53 DN756_04845 PF08532 Beta-galactosidase trimerisation domain DN756_04845 PF08533 Beta-galactosidase C-terminal domain DN756_04845 PF02449 Beta-galactosidase DN756_04850 PF02378 Phosphotransferase system, EIIC DN756_04850 PF00367 phosphotransferase system, EIIB DN756_04855 PF02264 LamB porin DN756_04860 PF00356 Bacterial regulatory proteins, lacI family DN756_04865 PF17137 Domain of unknown function (DUF5110) DN756_04865 PF01055 Glycosyl hydrolases family 31 DN756_04865 PF16338 Domain of unknown function (DUF4968) DN756_04865 PF13802 Galactose mutarotase-like DN756_04870 PF07690 Major Facilitator Superfamily DN756_04875 PF00356 Bacterial regulatory proteins, lacI family DN756_04890 PF01116 Fructose-bisphosphate aldolase class-II DN756_04900 PF00884 Sulfatase DN756_04905 PF13186 Iron-sulfur cluster-binding domain DN756_04905 PF04055 Radical SAM superfamily DN756_04920 PF01979 Amidohydrolase family DN756_04925 PF03610 PTS system fructose IIA component DN756_04930 PF03613 PTS system mannose/fructose/sorbose family IID component DN756_04935 PF03609 PTS system sorbose-specific iic component DN756_04940 PF03830 PTS system sorbose subfamily IIB component DN756_04945 PF01380 SIS domain DN756_04950 PF08013 Tagatose 6 phosphate kinase DN756_04955 PF08220 DeoR-like helix-turn-helix domain DN756_04955 PF00455 DeoR C terminal sensor domain DN756_04960 PF00884 Sulfatase DN756_04965 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DN756_04965 PF09093 Lyase, catalytic DN756_04965 PF02278 Polysaccharide lyase family 8, super-sandwich domain DN756_04965 PF09092 Lyase, N terminal DN756_04990 PF00484 Carbonic anhydrase DN756_05010 PF03958 Bacterial type II/III secretion system short domain DN756_05010 PF00263 Bacterial type II and III secretion system protein DN756_05025 PF00482 Type II secretion system (T2SS), protein F DN756_05030 PF07963 Prokaryotic N-terminal methylation motif DN756_05030 PF08334 Type II secretion system (T2SS), protein G DN756_05040 PF02501 Type II secretion system (T2SS), protein I DN756_05040 PF07963 Prokaryotic N-terminal methylation motif DN756_05065 PF01478 Type IV leader peptidase family DN756_05065 PF06750 Bacterial Peptidase A24 N-terminal domain DN756_05080 PF02203 Tar ligand binding domain homologue DN756_05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_05080 PF00672 HAMP domain DN756_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_05095 PF03466 LysR substrate binding domain DN756_05100 PF07690 Major Facilitator Superfamily DN756_05105 PF03466 LysR substrate binding domain DN756_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_05110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN756_05110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN756_05115 PF00356 Bacterial regulatory proteins, lacI family DN756_05120 PF01568 Molydopterin dinucleotide binding domain DN756_05120 PF00384 Molybdopterin oxidoreductase DN756_05125 PF01553 Acyltransferase DN756_05125 PF13193 AMP-binding enzyme C-terminal domain DN756_05125 PF00501 AMP-binding enzyme DN756_05130 PF07690 Major Facilitator Superfamily DN756_05145 PF00248 Aldo/keto reductase family DN756_05150 PF02976 DNA mismatch repair enzyme MutH DN756_05165 PF00293 NUDIX domain DN756_05170 PF00391 PEP-utilising enzyme, mobile domain DN756_05170 PF05524 PEP-utilising enzyme, N-terminal DN756_05170 PF01590 GAF domain DN756_05170 PF02896 PEP-utilising enzyme, TIM barrel domain DN756_05175 PF01790 Prolipoprotein diacylglyceryl transferase DN756_05180 PF00303 Thymidylate synthase DN756_05210 PF17946 RecC C-terminal domain DN756_05215 PF00675 Insulinase (Peptidase family M16) DN756_05215 PF16187 Middle or third domain of peptidase_M16 DN756_05215 PF05193 Peptidase M16 inactive domain DN756_05220 PF12705 PD-(D/E)XK nuclease superfamily DN756_05220 PF13361 UvrD-like helicase C-terminal domain DN756_05220 PF00580 UvrD/REP helicase N-terminal domain DN756_05225 PF13538 UvrD-like helicase C-terminal domain DN756_05230 PF00696 Amino acid kinase family DN756_05230 PF00583 Acetyltransferase (GNAT) family DN756_05235 PF11741 AMIN domain DN756_05235 PF01520 N-acetylmuramoyl-L-alanine amidase DN756_05255 PF06725 3D domain DN756_05255 PF03562 MltA specific insert domain DN756_05260 PF00899 ThiF family DN756_05265 PF02657 Fe-S metabolism associated domain DN756_05270 PF00266 Aminotransferase class-V DN756_05280 PF03466 LysR substrate binding domain DN756_05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_05285 PF04241 Protein of unknown function (DUF423) DN756_05290 PF01728 FtsJ-like methyltransferase DN756_05290 PF18125 RlmM ferredoxin-like domain DN756_05295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN756_05295 PF01367 5'-3' exonuclease, C-terminal SAM fold DN756_05305 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DN756_05305 PF11892 Domain of unknown function (DUF3412) DN756_05305 PF03641 Possible lysine decarboxylase DN756_05310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DN756_05310 PF14489 QueF-like protein DN756_05315 PF07348 Syd protein (SUKH-2) DN756_05320 PF04287 tRNA pseudouridine synthase C DN756_05325 PF00849 RNA pseudouridylate synthase DN756_05330 PF00258 Flavodoxin DN756_05335 PF11944 Protein of unknown function (DUF3461) DN756_05340 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_05340 PF14602 Hexapeptide repeat of succinyl-transferase DN756_05340 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DN756_05345 PF08335 GlnD PII-uridylyltransferase DN756_05345 PF01842 ACT domain DN756_05345 PF01909 Nucleotidyltransferase domain DN756_05345 PF01966 HD domain DN756_05350 PF00557 Metallopeptidase family M24 DN756_05355 PF00318 Ribosomal protein S2 DN756_05360 PF00889 Elongation factor TS DN756_05365 PF00696 Amino acid kinase family DN756_05370 PF01765 Ribosome recycling factor DN756_05380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN756_05380 PF13288 DXP reductoisomerase C-terminal domain DN756_05380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN756_05385 PF01255 Putative undecaprenyl diphosphate synthase DN756_05395 PF17820 PDZ domain DN756_05395 PF02163 Peptidase family M50 DN756_05400 PF01103 Surface antigen DN756_05400 PF07244 Surface antigen variable number repeat DN756_05405 PF03938 Outer membrane protein (OmpH-like) DN756_05410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DN756_05410 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_05415 PF07977 FabA-like domain DN756_05420 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_05420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DN756_05425 PF02684 Lipid-A-disaccharide synthetase DN756_05430 PF01351 Ribonuclease HII DN756_05435 PF01336 OB-fold nucleic acid binding domain DN756_05435 PF02811 PHP domain DN756_05435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN756_05435 PF14579 Helix-hairpin-helix motif DN756_05435 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN756_05440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN756_05445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN756_05450 PF01171 PP-loop family DN756_05450 PF11734 TilS substrate C-terminal domain DN756_05450 PF09179 TilS substrate binding domain DN756_05455 PF00034 Cytochrome c DN756_05460 PF07073 Modulator of Rho-dependent transcription termination (ROF) DN756_05465 PF06786 Uncharacterised protein family (UPF0253) DN756_05470 PF07152 YaeQ protein DN756_05475 PF00472 RF-1 domain DN756_05480 PF04170 NlpE N-terminal domain DN756_05480 PF17185 NlpE C-terminal OB domain DN756_05485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN756_05485 PF04073 Aminoacyl-tRNA editing domain DN756_05485 PF03129 Anticodon binding domain DN756_05490 PF18389 TrmO C-terminal domain DN756_05490 PF01980 tRNA-methyltransferase O DN756_05495 PF16358 RcsF lipoprotein DN756_05500 PF03180 NLPA lipoprotein DN756_05505 PF00528 Binding-protein-dependent transport system inner membrane component DN756_05510 PF00005 ABC transporter DN756_05510 PF09383 NIL domain DN756_05550 PF00248 Aldo/keto reductase family DN756_05565 PF03372 Endonuclease/Exonuclease/phosphatase family DN756_05570 PF01476 LysM domain DN756_05570 PF01464 Transglycosylase SLT domain DN756_05575 PF00753 Metallo-beta-lactamase superfamily DN756_05575 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN756_05580 PF08241 Methyltransferase domain DN756_05585 PF00075 RNase H DN756_05590 PF00929 Exonuclease DN756_05600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DN756_05610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN756_05615 PF00528 Binding-protein-dependent transport system inner membrane component DN756_05620 PF00571 CBS domain DN756_05620 PF00005 ABC transporter DN756_05625 PF00268 Ribonucleotide reductase, small chain DN756_05630 PF02867 Ribonucleotide reductase, barrel domain DN756_05630 PF00317 Ribonucleotide reductase, all-alpha domain DN756_05630 PF08343 Ribonucleotide reductase N-terminal DN756_05635 PF07972 NrdI Flavodoxin like DN756_05645 PF06392 Acid shock protein repeat DN756_05650 PF09400 Protein of unknown function (DUF2002) DN756_05655 PF06711 Protein of unknown function (DUF1198) DN756_05665 PF00313 'Cold-shock' DNA-binding domain DN756_05670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_05675 PF00528 Binding-protein-dependent transport system inner membrane component DN756_05680 PF00528 Binding-protein-dependent transport system inner membrane component DN756_05680 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_05685 PF00005 ABC transporter DN756_05690 PF00005 ABC transporter DN756_05695 PF00547 Urease, gamma subunit DN756_05700 PF00699 Urease beta subunit DN756_05705 PF00449 Urease alpha-subunit, N-terminal domain DN756_05705 PF01979 Amidohydrolase family DN756_05710 PF02814 UreE urease accessory protein, N-terminal domain DN756_05710 PF05194 UreE urease accessory protein, C-terminal domain DN756_05715 PF01730 UreF DN756_05720 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN756_05725 PF01774 UreD urease accessory protein DN756_05730 PF03253 Urea transporter DN756_05735 PF03824 High-affinity nickel-transport protein DN756_05740 PF06411 HdeA/HdeB family DN756_05750 PF07885 Ion channel DN756_05750 PF02254 TrkA-N domain DN756_05755 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN756_05760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN756_05770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN756_05775 PF02378 Phosphotransferase system, EIIC DN756_05780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN756_05785 PF07883 Cupin domain DN756_05785 PF12833 Helix-turn-helix domain DN756_05790 PF04794 YdjC-like protein DN756_05810 PF03925 SeqA protein C-terminal domain DN756_05810 PF17206 SeqA protein N-terminal domain DN756_05815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN756_05815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN756_05815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN756_05815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN756_05830 PF00072 Response regulator receiver domain DN756_05830 PF00486 Transcriptional regulatory protein, C terminal DN756_05835 PF13493 Domain of unknown function (DUF4118) DN756_05835 PF13492 GAF domain DN756_05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_05835 PF00512 His Kinase A (phospho-acceptor) domain DN756_05835 PF02702 Osmosensitive K+ channel His kinase sensor domain DN756_05840 PF02669 K+-transporting ATPase, c chain DN756_05850 PF03814 Potassium-transporting ATPase A subunit DN756_05865 PF10725 Protein of unknown function (DUF2517) DN756_05875 PF08349 Protein of unknown function (DUF1722) DN756_05880 PF03441 FAD binding domain of DNA photolyase DN756_05880 PF00875 DNA photolyase DN756_05885 PF02112 cAMP phosphodiesterases class-II DN756_05890 PF01784 NIF3 (NGG1p interacting factor 3) DN756_05895 PF02682 Carboxyltransferase domain, subdomain C and D DN756_05900 PF02626 Carboxyltransferase domain, subdomain A and B DN756_05905 PF03746 LamB/YcsF family DN756_05920 PF01470 Pyroglutamyl peptidase DN756_05925 PF03167 Uracil DNA glycosylase superfamily DN756_05930 PF01228 Glycine radical DN756_05940 PF12796 Ankyrin repeats (3 copies) DN756_05945 PF00271 Helicase conserved C-terminal domain DN756_05945 PF00270 DEAD/DEAH box helicase DN756_05950 PF05175 Methyltransferase small domain DN756_05955 PF02910 Fumarate reductase flavoprotein C-term DN756_05955 PF00890 FAD binding domain DN756_05960 PF04542 Sigma-70 region 2 DN756_05960 PF08281 Sigma-70, region 4 DN756_05965 PF03873 Anti sigma-E protein RseA, C-terminal domain DN756_05965 PF03872 Anti sigma-E protein RseA, N-terminal domain DN756_05970 PF03888 MucB/RseB N-terminal domain DN756_05970 PF17188 MucB/RseB C-terminal domain DN756_05985 PF06421 GTP-binding protein LepA C-terminus DN756_05985 PF00009 Elongation factor Tu GTP binding domain DN756_05985 PF03144 Elongation factor Tu domain 2 DN756_05985 PF00679 Elongation factor G C-terminus DN756_05990 PF10502 Signal peptidase, peptidase S26 DN756_05995 PF14622 Ribonuclease-III-like DN756_05995 PF00035 Double-stranded RNA binding motif DN756_06000 PF07650 KH domain DN756_06000 PF01926 50S ribosome-binding GTPase DN756_06005 PF11967 Recombination protein O N terminal DN756_06005 PF02565 Recombination protein O C terminal DN756_06010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DN756_06015 PF01648 4'-phosphopantetheinyl transferase superfamily DN756_06020 PF12838 4Fe-4S dicluster domain DN756_06025 PF01418 Helix-turn-helix domain, rpiR family DN756_06025 PF01380 SIS domain DN756_06030 PF01380 SIS domain DN756_06040 PF14437 MafB19-like deaminase DN756_06045 PF01464 Transglycosylase SLT domain DN756_06045 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_06050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN756_06050 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DN756_06050 PF02769 AIR synthase related protein, C-terminal domain DN756_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_06070 PF00512 His Kinase A (phospho-acceptor) domain DN756_06075 PF13942 YfhG lipoprotein DN756_06080 PF00158 Sigma-54 interaction domain DN756_06080 PF00072 Response regulator receiver domain DN756_06085 PF00795 Carbon-nitrogen hydrolase DN756_06085 PF02540 NAD synthase DN756_06090 PF00543 Nitrogen regulatory protein P-II DN756_06095 PF14502 Helix-turn-helix domain DN756_06095 PF14503 YhfZ C-terminal domain DN756_06100 PF00175 Oxidoreductase NAD-binding domain DN756_06100 PF00970 Oxidoreductase FAD-binding domain DN756_06100 PF00042 Globin DN756_06105 PF00464 Serine hydroxymethyltransferase DN756_06115 PF13505 Outer membrane protein beta-barrel domain DN756_06120 PF12832 MFS_1 like family DN756_06125 PF00874 PRD domain DN756_06130 PF06226 Protein of unknown function (DUF1007) DN756_06135 PF03824 High-affinity nickel-transport protein DN756_06140 PF00459 Inositol monophosphatase family DN756_06145 PF00588 SpoU rRNA Methylase family DN756_06150 PF02082 Transcriptional regulator DN756_06155 PF00266 Aminotransferase class-V DN756_06160 PF01592 NifU-like N terminal domain DN756_06165 PF01521 Iron-sulphur cluster biosynthesis DN756_06175 PF00226 DnaJ domain DN756_06175 PF07743 HSCB C-terminal oligomerisation domain DN756_06180 PF00012 Hsp70 protein DN756_06185 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_06190 PF04384 Iron-sulphur cluster assembly DN756_06195 PF00883 Cytosol aminopeptidase family, catalytic domain DN756_06195 PF12404 Peptidase DN756_06200 PF14581 SseB protein C-terminal domain DN756_06200 PF07179 SseB protein N-terminal domain DN756_06230 PF00334 Nucleoside diphosphate kinase DN756_06235 PF04055 Radical SAM superfamily DN756_06245 PF13464 Domain of unknown function (DUF4115) DN756_06250 PF04551 GcpE protein DN756_06255 PF13393 Histidyl-tRNA synthetase DN756_06255 PF03129 Anticodon binding domain DN756_06260 PF09976 Tetratricopeptide repeat-like domain DN756_06265 PF13360 PQQ-like domain DN756_06270 PF01926 50S ribosome-binding GTPase DN756_06270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN756_06280 PF07191 zinc-ribbons DN756_06285 PF13742 OB-fold nucleic acid binding domain DN756_06285 PF02601 Exonuclease VII, large subunit DN756_06290 PF00478 IMP dehydrogenase / GMP reductase domain DN756_06290 PF00571 CBS domain DN756_06295 PF00117 Glutamine amidotransferase class-I DN756_06295 PF00958 GMP synthase C terminal domain DN756_06295 PF02540 NAD synthase DN756_06300 PF05638 Type VI secretion system effector, Hcp DN756_06340 PF09134 Invasin, domain 3 DN756_06340 PF07979 Intimin C-type lectin domain DN756_06340 PF11924 Inverse autotransporter, beta-domain DN756_06340 PF02369 Bacterial Ig-like domain (group 1) DN756_06365 PF08543 Phosphomethylpyrimidine kinase DN756_06385 PF00781 Diacylglycerol kinase catalytic domain DN756_06395 PF07411 Domain of unknown function (DUF1508) DN756_06400 PF00072 Response regulator receiver domain DN756_06400 PF00486 Transcriptional regulatory protein, C terminal DN756_06405 PF00512 His Kinase A (phospho-acceptor) domain DN756_06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_06405 PF00672 HAMP domain DN756_06410 PF07690 Major Facilitator Superfamily DN756_06415 PF00873 AcrB/AcrD/AcrF family DN756_06420 PF00873 AcrB/AcrD/AcrF family DN756_06425 PF13533 Biotin-lipoyl like DN756_06430 PF00005 ABC transporter DN756_06430 PF08402 TOBE domain DN756_06435 PF00392 Bacterial regulatory proteins, gntR family DN756_06435 PF00155 Aminotransferase class I and II DN756_06440 PF00202 Aminotransferase class-III DN756_06450 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06455 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06460 PF00012 Hsp70 protein DN756_06465 PF03448 MgtE intracellular N domain DN756_06465 PF01769 Divalent cation transporter DN756_06465 PF00571 CBS domain DN756_06475 PF02541 Ppx/GppA phosphatase family DN756_06480 PF13089 Polyphosphate kinase N-terminal domain DN756_06480 PF17941 Polyphosphate kinase C-terminal domain 1 DN756_06480 PF13090 Polyphosphate kinase C-terminal domain 2 DN756_06480 PF02503 Polyphosphate kinase middle domain DN756_06485 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06490 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06495 PF00005 ABC transporter DN756_06505 PF13302 Acetyltransferase (GNAT) domain DN756_06510 PF00551 Formyl transferase DN756_06515 PF02769 AIR synthase related protein, C-terminal domain DN756_06515 PF00586 AIR synthase related protein, N-terminal domain DN756_06525 PF00860 Permease family DN756_06530 PF00308 Bacterial dnaA protein DN756_06535 PF03960 ArsC family DN756_06540 PF01435 Peptidase family M48 DN756_06540 PF07720 Tetratricopeptide repeat DN756_06545 PF01594 AI-2E family transporter DN756_06560 PF00578 AhpC/TSA family DN756_06565 PF01842 ACT domain DN756_06570 PF00701 Dihydrodipicolinate synthetase family DN756_06575 PF06804 NlpB/DapX lipoprotein DN756_06580 PF01259 SAICAR synthetase DN756_06585 PF04228 Putative neutral zinc metallopeptidase DN756_06590 PF04284 Protein of unknown function (DUF441) DN756_06595 PF05127 Helicase DN756_06595 PF17176 tRNA-binding domain DN756_06595 PF13718 GNAT acetyltransferase 2 DN756_06595 PF08351 Domain of unknown function (DUF1726) DN756_06600 PF13980 Uncharacterised protein family (UPF0370) DN756_06605 PF02557 D-alanyl-D-alanine carboxypeptidase DN756_06610 PF01546 Peptidase family M20/M25/M40 DN756_06610 PF07687 Peptidase dimerisation domain DN756_06615 PF03960 ArsC family DN756_06630 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06635 PF00005 ABC transporter DN756_06635 PF08402 TOBE domain DN756_06645 PF00884 Sulfatase DN756_06650 PF13186 Iron-sulfur cluster-binding domain DN756_06650 PF04055 Radical SAM superfamily DN756_06655 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN756_06665 PF00873 AcrB/AcrD/AcrF family DN756_06675 PF00072 Response regulator receiver domain DN756_06675 PF00196 Bacterial regulatory proteins, luxR family DN756_06680 PF00037 4Fe-4S binding domain DN756_06680 PF12800 4Fe-4S binding domain DN756_06680 PF13187 4Fe-4S dicluster domain DN756_06685 PF03927 NapD protein DN756_06690 PF00384 Molybdopterin oxidoreductase DN756_06690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_06690 PF01568 Molydopterin dinucleotide binding domain DN756_06690 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN756_06695 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DN756_06700 PF03264 NapC/NirT cytochrome c family, N-terminal region DN756_06705 PF00293 NUDIX domain DN756_06710 PF03949 Malic enzyme, NAD binding domain DN756_06710 PF01515 Phosphate acetyl/butaryl transferase DN756_06710 PF00390 Malic enzyme, N-terminal domain DN756_06715 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN756_06720 PF01218 Coproporphyrinogen III oxidase DN756_06725 PF00583 Acetyltransferase (GNAT) family DN756_06740 PF13018 Extended Signal Peptide of Type V secretion system DN756_06740 PF16168 Adhesin of bacterial autotransporter system, probable stalk DN756_06740 PF03797 Autotransporter beta-domain DN756_06740 PF03212 Pertactin DN756_06745 PF04076 Bacterial OB fold (BOF) protein DN756_06750 PF06572 Protein of unknown function (DUF1131) DN756_06755 PF04261 Dyp-type peroxidase family DN756_06760 PF00701 Dihydrodipicolinate synthetase family DN756_06765 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DN756_06770 PF12468 Type III secretion system leucine rich repeat protein DN756_06775 PF00480 ROK family DN756_06780 PF04074 YhcH/YjgK/YiaL DN756_06790 PF01380 SIS domain DN756_06790 PF01418 Helix-turn-helix domain, rpiR family DN756_06795 PF07690 Major Facilitator Superfamily DN756_06805 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06810 PF00528 Binding-protein-dependent transport system inner membrane component DN756_06815 PF00005 ABC transporter DN756_06820 PF00291 Pyridoxal-phosphate dependent enzyme DN756_06825 PF14496 C-terminal novel E3 ligase, LRR-interacting DN756_06825 PF12468 Type III secretion system leucine rich repeat protein DN756_06830 PF00072 Response regulator receiver domain DN756_06830 PF00486 Transcriptional regulatory protein, C terminal DN756_06835 PF00672 HAMP domain DN756_06835 PF00512 His Kinase A (phospho-acceptor) domain DN756_06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_06845 PF00155 Aminotransferase class I and II DN756_06850 PF05195 Aminopeptidase P, N-terminal domain DN756_06850 PF00557 Metallopeptidase family M24 DN756_06860 PF00474 Sodium:solute symporter family DN756_06865 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_06865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN756_06870 PF00005 ABC transporter DN756_06870 PF02687 FtsX-like permease family DN756_06870 PF12704 MacB-like periplasmic core domain DN756_06875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_06880 PF00486 Transcriptional regulatory protein, C terminal DN756_06880 PF00072 Response regulator receiver domain DN756_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_06885 PF00512 His Kinase A (phospho-acceptor) domain DN756_06885 PF00672 HAMP domain DN756_06885 PF16527 Two-component sensor protein CpxA, periplasmic domain DN756_06890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN756_06895 PF02896 PEP-utilising enzyme, TIM barrel domain DN756_06895 PF00391 PEP-utilising enzyme, mobile domain DN756_06895 PF05524 PEP-utilising enzyme, N-terminal DN756_06900 PF00381 PTS HPr component phosphorylation site DN756_06905 PF00291 Pyridoxal-phosphate dependent enzyme DN756_06915 PF04354 ZipA, C-terminal FtsZ-binding domain DN756_06920 PF01653 NAD-dependent DNA ligase adenylation domain DN756_06920 PF03120 NAD-dependent DNA ligase OB-fold domain DN756_06920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN756_06920 PF00533 BRCA1 C Terminus (BRCT) domain DN756_06920 PF12826 Helix-hairpin-helix motif DN756_06925 PF12843 Putative quorum-sensing-regulated virulence factor DN756_06955 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN756_06995 PF07670 Nucleoside recognition DN756_06995 PF07662 Na+ dependent nucleoside transporter C-terminus DN756_06995 PF01773 Na+ dependent nucleoside transporter N-terminus DN756_07000 PF01566 Natural resistance-associated macrophage protein DN756_07010 PF00248 Aldo/keto reductase family DN756_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_07015 PF03466 LysR substrate binding domain DN756_07025 PF02685 Glucokinase DN756_07030 PF07350 Protein of unknown function (DUF1479) DN756_07035 PF00155 Aminotransferase class I and II DN756_07040 PF01292 Prokaryotic cytochrome b561 DN756_07050 PF03783 Curli production assembly/transport component CsgG DN756_07060 PF05643 Putative bacterial lipoprotein (DUF799) DN756_07070 PF02613 Nitrate reductase delta subunit DN756_07080 PF04976 DMSO reductase anchor subunit (DmsC) DN756_07085 PF13247 4Fe-4S dicluster domain DN756_07085 PF12800 4Fe-4S binding domain DN756_07090 PF00384 Molybdopterin oxidoreductase DN756_07090 PF01568 Molydopterin dinucleotide binding domain DN756_07090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_07100 PF05638 Type VI secretion system effector, Hcp DN756_07110 PF00005 ABC transporter DN756_07115 PF00528 Binding-protein-dependent transport system inner membrane component DN756_07125 PF13406 Transglycosylase SLT domain DN756_07175 PF17871 AAA lid domain DN756_07175 PF00004 ATPase family associated with various cellular activities (AAA) DN756_07175 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_07175 PF07724 AAA domain (Cdc48 subfamily) DN756_07180 PF16970 Type-1 fimbrial protein, A DN756_07185 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_07185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_07190 PF00577 Outer membrane usher protein DN756_07190 PF13954 PapC N-terminal domain DN756_07190 PF13953 PapC C-terminal domain DN756_07235 PF04717 Type VI secretion system, phage-baseplate injector DN756_07265 PF03831 PhnA domain DN756_07265 PF08274 PhnA Zinc-Ribbon DN756_07280 PF04011 LemA family DN756_07295 PF00005 ABC transporter DN756_07300 PF03379 CcmB protein DN756_07305 PF01578 Cytochrome C assembly protein DN756_07310 PF04995 Heme exporter protein D (CcmD) DN756_07315 PF03100 CcmE DN756_07320 PF01578 Cytochrome C assembly protein DN756_07320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DN756_07325 PF08534 Redoxin DN756_07330 PF03918 Cytochrome C biogenesis protein DN756_07335 PF03918 Cytochrome C biogenesis protein DN756_07340 PF04333 MlaA lipoprotein DN756_07345 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DN756_07350 PF04175 Protein of unknown function (DUF406) DN756_07355 PF02803 Thiolase, C-terminal domain DN756_07355 PF00108 Thiolase, N-terminal domain DN756_07360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN756_07360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN756_07360 PF00378 Enoyl-CoA hydratase/isomerase DN756_07365 PF00300 Histidine phosphatase superfamily (branch 1) DN756_07370 PF01713 Smr domain DN756_07375 PF05175 Methyltransferase small domain DN756_07380 PF01264 Chorismate synthase DN756_07385 PF03411 Penicillin-insensitive murein endopeptidase DN756_07390 PF01925 Sulfite exporter TauE/SafE DN756_07395 PF04315 Elongation factor P hydroxylase DN756_07400 PF08891 YfcL protein DN756_07405 PF01266 FAD dependent oxidoreductase DN756_07405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DN756_07410 PF00109 Beta-ketoacyl synthase, N-terminal domain DN756_07410 PF02801 Beta-ketoacyl synthase, C-terminal domain DN756_07415 PF01177 Asp/Glu/Hydantoin racemase DN756_07420 PF00419 Fimbrial protein DN756_07430 PF00892 EamA-like transporter family DN756_07440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_07440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_07440 PF11890 Domain of unknown function (DUF3410) DN756_07445 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN756_07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN756_07450 PF01416 tRNA pseudouridine synthase DN756_07455 PF09335 SNARE associated Golgi protein DN756_07460 PF01039 Carboxyl transferase domain DN756_07460 PF17848 Acetyl-coA carboxylase zinc finger domain DN756_07465 PF02875 Mur ligase family, glutamate ligase domain DN756_07465 PF08245 Mur ligase middle domain DN756_07470 PF05036 Sporulation related domain DN756_07475 PF02674 Colicin V production protein DN756_07480 PF00156 Phosphoribosyl transferase domain DN756_07485 PF02441 Flavoprotein DN756_07490 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_07495 PF00528 Binding-protein-dependent transport system inner membrane component DN756_07500 PF00528 Binding-protein-dependent transport system inner membrane component DN756_07505 PF00005 ABC transporter DN756_07510 PF08338 Domain of unknown function (DUF1731) DN756_07510 PF01370 NAD dependent epimerase/dehydratase family DN756_07520 PF12850 Calcineurin-like phosphoesterase superfamily domain DN756_07525 PF00293 NUDIX domain DN756_07530 PF03611 PTS system sugar-specific permease component DN756_07540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN756_07545 PF00356 Bacterial regulatory proteins, lacI family DN756_07545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_07550 PF07085 DRTGG domain DN756_07550 PF01515 Phosphate acetyl/butaryl transferase DN756_07555 PF00871 Acetokinase family DN756_07565 PF04217 Protein of unknown function, DUF412 DN756_07570 PF03887 YfbU domain DN756_07575 PF13419 Haloacid dehalogenase-like hydrolase DN756_07580 PF03600 Citrate transporter DN756_07580 PF02080 TrkA-C domain DN756_07595 PF00155 Aminotransferase class I and II DN756_07600 PF03466 LysR substrate binding domain DN756_07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_07605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DN756_07610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DN756_07615 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DN756_07615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN756_07625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DN756_07625 PF10531 SLBB domain DN756_07625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN756_07630 PF00384 Molybdopterin oxidoreductase DN756_07630 PF01568 Molydopterin dinucleotide binding domain DN756_07630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN756_07630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_07635 PF00146 NADH dehydrogenase DN756_07640 PF12838 4Fe-4S dicluster domain DN756_07645 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN756_07650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DN756_07655 PF00361 Proton-conducting membrane transporter DN756_07655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN756_07660 PF00361 Proton-conducting membrane transporter DN756_07665 PF00361 Proton-conducting membrane transporter DN756_07675 PF04074 YhcH/YjgK/YiaL DN756_07680 PF01202 Shikimate kinase DN756_07685 PF00106 short chain dehydrogenase DN756_07700 PF00356 Bacterial regulatory proteins, lacI family DN756_07705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_07705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_07710 PF07690 Major Facilitator Superfamily DN756_07715 PF03928 Haem-degrading DN756_07720 PF00920 Dehydratase family DN756_07735 PF05957 Bacterial protein of unknown function (DUF883) DN756_07750 PF00425 chorismate binding enzyme DN756_07755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_07755 PF16582 Middle domain of thiamine pyrophosphate DN756_07755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_07760 PF12697 Alpha/beta hydrolase family DN756_07765 PF00378 Enoyl-CoA hydratase/isomerase DN756_07770 PF13378 Enolase C-terminal domain-like DN756_07775 PF00501 AMP-binding enzyme DN756_07775 PF13193 AMP-binding enzyme C-terminal domain DN756_07780 PF02885 Glycosyl transferase family, helical bundle domain DN756_07790 PF07338 Protein of unknown function (DUF1471) DN756_07795 PF05971 RNA methyltransferase DN756_07805 PF13426 PAS domain DN756_07805 PF08447 PAS fold DN756_07805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_07810 PF00005 ABC transporter DN756_07815 PF00528 Binding-protein-dependent transport system inner membrane component DN756_07820 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_07835 PF00210 Ferritin-like domain DN756_07840 PF13649 Methyltransferase domain DN756_07850 PF00892 EamA-like transporter family DN756_07855 PF13505 Outer membrane protein beta-barrel domain DN756_07875 PF00107 Zinc-binding dehydrogenase DN756_07875 PF08240 Alcohol dehydrogenase GroES-like domain DN756_07880 PF13407 Periplasmic binding protein domain DN756_07885 PF00005 ABC transporter DN756_07890 PF02653 Branched-chain amino acid transport system / permease component DN756_07895 PF00356 Bacterial regulatory proteins, lacI family DN756_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_07900 PF03466 LysR substrate binding domain DN756_07905 PF00180 Isocitrate/isopropylmalate dehydrogenase DN756_07915 PF02028 BCCT, betaine/carnitine/choline family transporter DN756_07920 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DN756_07920 PF00355 Rieske [2Fe-2S] domain DN756_07925 PF00175 Oxidoreductase NAD-binding domain DN756_07925 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_07925 PF00970 Oxidoreductase FAD-binding domain DN756_07930 PF08479 POTRA domain, ShlB-type DN756_07930 PF17287 POTRA domain DN756_07930 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DN756_07955 PF05860 haemagglutination activity domain DN756_07955 PF13018 Extended Signal Peptide of Type V secretion system DN756_07955 PF13332 Hemagglutinin repeat DN756_07955 PF04829 Pre-toxin domain with VENN motif DN756_07965 PF00872 Transposase, Mutator family DN756_07975 PF01381 Helix-turn-helix DN756_07990 PF17912 MalK OB fold domain DN756_07990 PF00005 ABC transporter DN756_07995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN756_07995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN756_07995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN756_07995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN756_08000 PF00356 Bacterial regulatory proteins, lacI family DN756_08010 PF00528 Binding-protein-dependent transport system inner membrane component DN756_08015 PF00528 Binding-protein-dependent transport system inner membrane component DN756_08020 PF04041 beta-1,4-mannooligosaccharide phosphorylase DN756_08045 PF00924 Mechanosensitive ion channel DN756_08050 PF01867 CRISPR associated protein Cas1 DN756_08060 PF09611 CRISPR-associated protein (Cas_Csy1) DN756_08065 PF09614 CRISPR-associated protein (Cas_Csy2) DN756_08070 PF09615 CRISPR-associated protein (Cas_Csy3) DN756_08075 PF09618 CRISPR-associated protein (Cas_Csy4) DN756_08080 PF00248 Aldo/keto reductase family DN756_08090 PF00083 Sugar (and other) transporter DN756_08100 PF03466 LysR substrate binding domain DN756_08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_08105 PF00196 Bacterial regulatory proteins, luxR family DN756_08105 PF03472 Autoinducer binding domain DN756_08110 PF00765 Autoinducer synthase DN756_08120 PF03471 Transporter associated domain DN756_08120 PF02080 TrkA-C domain DN756_08120 PF00999 Sodium/hydrogen exchanger family DN756_08135 PF01757 Acyltransferase family DN756_08140 PF04349 Periplasmic glucan biosynthesis protein, MdoG DN756_08145 PF00535 Glycosyl transferase family 2 DN756_08150 PF07119 Protein of unknown function (DUF1375) DN756_08155 PF00854 POT family DN756_08160 PF03279 Bacterial lipid A biosynthesis acyltransferase DN756_08180 PF01594 AI-2E family transporter DN756_08190 PF00196 Bacterial regulatory proteins, luxR family DN756_08195 PF01266 FAD dependent oxidoreductase DN756_08200 PF13991 BssS protein family DN756_08210 PF06183 DinI-like family DN756_08215 PF01979 Amidohydrolase family DN756_08220 PF03992 Antibiotic biosynthesis monooxygenase DN756_08230 PF12111 Polyribonucleotide phosphorylase C terminal DN756_08230 PF10150 Ribonuclease E/G family DN756_08230 PF00575 S1 RNA binding domain DN756_08240 PF01479 S4 domain DN756_08240 PF00849 RNA pseudouridylate synthase DN756_08245 PF01797 Transposase IS200 like DN756_08250 PF02545 Maf-like protein DN756_08255 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN756_08260 PF01783 Ribosomal L32p protein family DN756_08265 PF02504 Fatty acid synthesis protein DN756_08270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN756_08270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN756_08275 PF00698 Acyl transferase domain DN756_08285 PF00550 Phosphopantetheine attachment site DN756_08290 PF02801 Beta-ketoacyl synthase, C-terminal domain DN756_08290 PF00109 Beta-ketoacyl synthase, N-terminal domain DN756_08295 PF01063 Amino-transferase class IV DN756_08300 PF02618 YceG-like family DN756_08305 PF02223 Thymidylate kinase DN756_08310 PF09115 DNA polymerase III, delta subunit, C terminal DN756_08315 PF01026 TatD related DNase DN756_08320 PF02378 Phosphotransferase system, EIIC DN756_08320 PF00367 phosphotransferase system, EIIB DN756_08325 PF08501 Shikimate dehydrogenase substrate binding domain DN756_08330 PF01230 HIT domain DN756_08335 PF07233 Protein of unknown function (DUF1425) DN756_08340 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DN756_08340 PF13036 Peptidoglycan-synthase activator LpoB DN756_08345 PF01636 Phosphotransferase enzyme family DN756_08350 PF00933 Glycosyl hydrolase family 3 N terminal domain DN756_08355 PF05728 Uncharacterised protein family (UPF0227) DN756_08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_08375 PF05433 Glycine zipper 2TM domain DN756_08380 PF03461 TRCF domain DN756_08380 PF00271 Helicase conserved C-terminal domain DN756_08380 PF02559 CarD-like/TRCF domain DN756_08380 PF17757 UvrB interaction domain DN756_08380 PF00270 DEAD/DEAH box helicase DN756_08385 PF02687 FtsX-like permease family DN756_08385 PF12704 MacB-like periplasmic core domain DN756_08390 PF00005 ABC transporter DN756_08395 PF02687 FtsX-like permease family DN756_08395 PF12704 MacB-like periplasmic core domain DN756_08405 PF00480 ROK family DN756_08410 PF02146 Sir2 family DN756_08415 PF07687 Peptidase dimerisation domain DN756_08415 PF01546 Peptidase family M20/M25/M40 DN756_08420 PF08007 Cupin superfamily protein DN756_08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_08425 PF08918 PhoQ Sensor DN756_08430 PF00486 Transcriptional regulatory protein, C terminal DN756_08430 PF00072 Response regulator receiver domain DN756_08440 PF08328 Adenylosuccinate lyase C-terminal DN756_08440 PF00206 Lyase DN756_08445 PF04356 Protein of unknown function (DUF489) DN756_08455 PF00293 NUDIX domain DN756_08460 PF00849 RNA pseudouridylate synthase DN756_08465 PF00180 Isocitrate/isopropylmalate dehydrogenase DN756_08470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_08470 PF00356 Bacterial regulatory proteins, lacI family DN756_08480 PF08447 PAS fold DN756_08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_08485 PF05368 NmrA-like family DN756_08490 PF01638 HxlR-like helix-turn-helix DN756_08495 PF00328 Histidine phosphatase superfamily (branch 2) DN756_08500 PF14001 YdfZ protein DN756_08510 PF13404 AsnC-type helix-turn-helix domain DN756_08510 PF01037 Lrp/AsnC ligand binding domain DN756_08515 PF10777 Inner membrane protein YlaC DN756_08520 PF00109 Beta-ketoacyl synthase, N-terminal domain DN756_08520 PF00698 Acyl transferase domain DN756_08520 PF08240 Alcohol dehydrogenase GroES-like domain DN756_08520 PF02801 Beta-ketoacyl synthase, C-terminal domain DN756_08520 PF00107 Zinc-binding dehydrogenase DN756_08520 PF16197 Ketoacyl-synthetase C-terminal extension DN756_08520 PF00550 Phosphopantetheine attachment site DN756_08520 PF08659 KR domain DN756_08520 PF14765 Polyketide synthase dehydratase DN756_08525 PF02929 Beta galactosidase small chain DN756_08525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DN756_08525 PF16353 Domain of unknown function(DUF4981) DN756_08525 PF02837 Glycosyl hydrolases family 2, sugar binding domain DN756_08525 PF00703 Glycosyl hydrolases family 2 DN756_08530 PF00313 'Cold-shock' DNA-binding domain DN756_08535 PF10781 Dextransucrase DSRB DN756_08540 PF00672 HAMP domain DN756_08540 PF02203 Tar ligand binding domain homologue DN756_08540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_08545 PF02308 MgtC family DN756_08550 PF00690 Cation transporter/ATPase, N-terminus DN756_08550 PF00689 Cation transporting ATPase, C-terminus DN756_08555 PF05247 Flagellar transcriptional activator (FlhD) DN756_08560 PF05280 Flagellar transcriptional activator (FlhC) DN756_08565 PF01618 MotA/TolQ/ExbB proton channel family DN756_08570 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN756_08570 PF00691 OmpA family DN756_08575 PF01627 Hpt domain DN756_08575 PF02895 Signal transducing histidine kinase, homodimeric domain DN756_08575 PF01584 CheW-like domain DN756_08575 PF09078 CheY binding DN756_08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_08580 PF01584 CheW-like domain DN756_08595 PF00672 HAMP domain DN756_08595 PF02203 Tar ligand binding domain homologue DN756_08595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_08605 PF01739 CheR methyltransferase, SAM binding domain DN756_08605 PF03705 CheR methyltransferase, all-alpha domain DN756_08610 PF01339 CheB methylesterase DN756_08610 PF00072 Response regulator receiver domain DN756_08615 PF00072 Response regulator receiver domain DN756_08620 PF04344 Chemotaxis phosphatase, CheZ DN756_08630 PF01510 N-acetylmuramoyl-L-alanine amidase DN756_08645 PF00842 Alanine racemase, C-terminal domain DN756_08645 PF01168 Alanine racemase, N-terminal domain DN756_08675 PF07351 Protein of unknown function (DUF1480) DN756_08690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_08690 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_08710 PF02470 MlaD protein DN756_08715 PF04403 Paraquat-inducible protein A DN756_08720 PF13185 GAF domain DN756_08725 PF17516 ProQ C-terminal domain DN756_08725 PF04352 ProQ/FINO family DN756_08730 PF00595 PDZ domain DN756_08730 PF17804 Tail specific protease N-terminal domain DN756_08730 PF03572 Peptidase family S41 DN756_08730 PF11818 C-terminal domain of tail specific protease (DUF3340) DN756_08735 PF01435 Peptidase family M48 DN756_08745 PF00419 Fimbrial protein DN756_08750 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_08750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_08755 PF13954 PapC N-terminal domain DN756_08755 PF00577 Outer membrane usher protein DN756_08755 PF13953 PapC C-terminal domain DN756_08765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_08765 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_08770 PF07690 Major Facilitator Superfamily DN756_08775 PF14583 Oligogalacturonate lyase DN756_08780 PF09339 IclR helix-turn-helix domain DN756_08780 PF01614 Bacterial transcriptional regulator DN756_08785 PF01510 N-acetylmuramoyl-L-alanine amidase DN756_08795 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN756_08800 PF06178 Oligogalacturonate-specific porin protein (KdgM) DN756_08805 PF01547 Bacterial extracellular solute-binding protein DN756_08810 PF00005 ABC transporter DN756_08810 PF03459 TOBE domain DN756_08810 PF17912 MalK OB fold domain DN756_08815 PF00528 Binding-protein-dependent transport system inner membrane component DN756_08820 PF00528 Binding-protein-dependent transport system inner membrane component DN756_08825 PF06917 Periplasmic pectate lyase DN756_08835 PF04962 KduI/IolB family DN756_08840 PF07883 Cupin domain DN756_08850 PF00872 Transposase, Mutator family DN756_08860 PF13419 Haloacid dehalogenase-like hydrolase DN756_08865 PF14002 YniB-like protein DN756_08880 PF00950 ABC 3 transport family DN756_08885 PF00950 ABC 3 transport family DN756_08890 PF00005 ABC transporter DN756_08895 PF01297 Zinc-uptake complex component A periplasmic DN756_08900 PF01464 Transglycosylase SLT domain DN756_08905 PF01914 MarC family integral membrane protein DN756_08920 PF13619 KTSC domain DN756_08925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN756_08925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN756_08925 PF03129 Anticodon binding domain DN756_08925 PF02824 TGS domain DN756_08930 PF05198 Translation initiation factor IF-3, N-terminal domain DN756_08930 PF00707 Translation initiation factor IF-3, C-terminal domain DN756_08935 PF01632 Ribosomal protein L35 DN756_08940 PF00453 Ribosomal protein L20 DN756_08945 PF01409 tRNA synthetases class II core domain (F) DN756_08945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN756_08950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN756_08950 PF01588 Putative tRNA binding domain DN756_08950 PF03484 tRNA synthetase B5 domain DN756_08950 PF03483 B3/4 domain DN756_08950 PF03147 Ferredoxin-fold anticodon binding domain DN756_08955 PF00216 Bacterial DNA-binding protein DN756_08965 PF01032 FecCD transport family DN756_08970 PF00255 Glutathione peroxidase DN756_08975 PF00005 ABC transporter DN756_08980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN756_08985 PF00535 Glycosyl transferase family 2 DN756_08995 PF01522 Polysaccharide deacetylase DN756_09000 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DN756_09005 PF00892 EamA-like transporter family DN756_09020 PF00877 NlpC/P60 family DN756_09025 PF10437 Bacterial lipoate protein ligase C-terminus DN756_09025 PF03099 Biotin/lipoate A/B protein ligase family DN756_09030 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DN756_09035 PF00793 DAHP synthetase I family DN756_09040 PF03618 Kinase/pyrophosphorylase DN756_09045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN756_09045 PF02896 PEP-utilising enzyme, TIM barrel domain DN756_09045 PF00391 PEP-utilising enzyme, mobile domain DN756_09055 PF01594 AI-2E family transporter DN756_09060 PF13183 4Fe-4S dicluster domain DN756_09060 PF01565 FAD binding domain DN756_09060 PF02913 FAD linked oxidases, C-terminal domain DN756_09065 PF03061 Thioesterase superfamily DN756_09075 PF01521 Iron-sulphur cluster biosynthesis DN756_09080 PF01458 Uncharacterized protein family (UPF0051) DN756_09085 PF00005 ABC transporter DN756_09090 PF01458 Uncharacterized protein family (UPF0051) DN756_09095 PF00266 Aminotransferase class-V DN756_09100 PF02657 Fe-S metabolism associated domain DN756_09105 PF03734 L,D-transpeptidase catalytic domain DN756_09105 PF01476 LysM domain DN756_09105 PF17969 L,D-transpeptidase C-terminal domain DN756_09110 PF04728 Lipoprotein leucine-zipper DN756_09115 PF02887 Pyruvate kinase, alpha/beta domain DN756_09115 PF00224 Pyruvate kinase, barrel domain DN756_09135 PF01554 MatE DN756_09145 PF00677 Lumazine binding domain DN756_09155 PF07690 Major Facilitator Superfamily DN756_09160 PF03466 LysR substrate binding domain DN756_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_09165 PF00356 Bacterial regulatory proteins, lacI family DN756_09175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN756_09175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN756_09180 PF00877 NlpC/P60 family DN756_09190 PF00462 Glutaredoxin DN756_09200 PF00929 Exonuclease DN756_09205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN756_09215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN756_09220 PF16925 Tetracyclin repressor-like, C-terminal domain DN756_09220 PF00440 Bacterial regulatory proteins, tetR family DN756_09225 PF01047 MarR family DN756_09230 PF05433 Glycine zipper 2TM domain DN756_09235 PF03702 Anhydro-N-acetylmuramic acid kinase DN756_09240 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DN756_09245 PF01243 Pyridoxamine 5'-phosphate oxidase DN756_09245 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DN756_09250 PF00579 tRNA synthetases class I (W and Y) DN756_09250 PF01479 S4 domain DN756_09255 PF08543 Phosphomethylpyrimidine kinase DN756_09260 PF00043 Glutathione S-transferase, C-terminal domain DN756_09260 PF02798 Glutathione S-transferase, N-terminal domain DN756_09265 PF11656 YjbD family (DUF3811) DN756_09270 PF04893 Yip1 domain DN756_09275 PF00854 POT family DN756_09285 PF00005 ABC transporter DN756_09290 PF00005 ABC transporter DN756_09290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_09295 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_09295 PF00528 Binding-protein-dependent transport system inner membrane component DN756_09300 PF00528 Binding-protein-dependent transport system inner membrane component DN756_09305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_09315 PF00158 Sigma-54 interaction domain DN756_09315 PF02954 Bacterial regulatory protein, Fis family DN756_09320 PF04012 PspA/IM30 family DN756_09325 PF06667 Phage shock protein B DN756_09330 PF04024 PspC domain DN756_09340 PF04317 YcjX-like family, DUF463 DN756_09345 PF05128 Domain of unknown function (DUF697) DN756_09360 PF00158 Sigma-54 interaction domain DN756_09360 PF18024 Helix-turn-helix domain DN756_09365 PF08534 Redoxin DN756_09370 PF13378 Enolase C-terminal domain-like DN756_09370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN756_09375 PF00246 Zinc carboxypeptidase DN756_09380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_09385 PF01544 CorA-like Mg2+ transporter protein DN756_09405 PF07859 alpha/beta hydrolase fold DN756_09405 PF13472 GDSL-like Lipase/Acylhydrolase family DN756_09410 PF01171 PP-loop family DN756_09415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_09415 PF10371 Domain of unknown function DN756_09415 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN756_09415 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN756_09415 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN756_09420 PF00893 Small Multidrug Resistance protein DN756_09425 PF02308 MgtC family DN756_09430 PF03891 Domain of unknown function (DUF333) DN756_09435 PF03724 META domain DN756_09440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_09440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_09445 PF11739 Dicarboxylate transport DN756_09450 PF13617 YnbE-like lipoprotein DN756_09455 PF07027 Protein of unknown function (DUF1318) DN756_09460 PF01232 Mannitol dehydrogenase Rossmann domain DN756_09460 PF08125 Mannitol dehydrogenase C-terminal domain DN756_09465 PF04198 Putative sugar-binding domain DN756_09465 PF00325 Bacterial regulatory proteins, crp family DN756_09470 PF02525 Flavodoxin-like fold DN756_09475 PF00271 Helicase conserved C-terminal domain DN756_09475 PF00270 DEAD/DEAH box helicase DN756_09475 PF11898 Domain of unknown function (DUF3418) DN756_09475 PF04408 Helicase associated domain (HA2) DN756_09475 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DN756_09490 PF00089 Trypsin DN756_09505 PF01292 Prokaryotic cytochrome b561 DN756_09510 PF04264 YceI-like domain DN756_09530 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN756_09535 PF00672 HAMP domain DN756_09535 PF00512 His Kinase A (phospho-acceptor) domain DN756_09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_09540 PF00486 Transcriptional regulatory protein, C terminal DN756_09540 PF00072 Response regulator receiver domain DN756_09550 PF13520 Amino acid permease DN756_09555 PF07338 Protein of unknown function (DUF1471) DN756_09565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN756_09565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DN756_09565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN756_09570 PF02233 NAD(P) transhydrogenase beta subunit DN756_09575 PF00582 Universal stress protein family DN756_09580 PF00027 Cyclic nucleotide-binding domain DN756_09580 PF13545 Crp-like helix-turn-helix domain DN756_09585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN756_09585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN756_09590 PF00245 Alkaline phosphatase DN756_09600 PF13419 Haloacid dehalogenase-like hydrolase DN756_09605 PF01842 ACT domain DN756_09610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_09610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_09610 PF00205 Thiamine pyrophosphate enzyme, central domain DN756_09640 PF01048 Phosphorylase superfamily DN756_09640 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DN756_09645 PF00005 ABC transporter DN756_09650 PF00528 Binding-protein-dependent transport system inner membrane component DN756_09655 PF09084 NMT1/THI5 like DN756_09665 PF00005 ABC transporter DN756_09670 PF02653 Branched-chain amino acid transport system / permease component DN756_09675 PF13407 Periplasmic binding protein domain DN756_09685 PF00356 Bacterial regulatory proteins, lacI family DN756_09690 PF03553 Na+/H+ antiporter family DN756_09695 PF00155 Aminotransferase class I and II DN756_09715 PF00892 EamA-like transporter family DN756_09725 PF00171 Aldehyde dehydrogenase family DN756_09730 PF01590 GAF domain DN756_09730 PF02954 Bacterial regulatory protein, Fis family DN756_09730 PF00158 Sigma-54 interaction domain DN756_09735 PF00106 short chain dehydrogenase DN756_09740 PF06932 Protein of unknown function (DUF1283) DN756_09745 PF06649 Protein of unknown function (DUF1161) DN756_09750 PF00654 Voltage gated chloride channel DN756_09760 PF00480 ROK family DN756_09765 PF03466 LysR substrate binding domain DN756_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_09770 PF07690 Major Facilitator Superfamily DN756_09775 PF05472 DNA replication terminus site-binding protein (Ter protein) DN756_09780 PF00206 Lyase DN756_09780 PF10415 Fumarase C C-terminus DN756_09785 PF01238 Phosphomannose isomerase type I DN756_09790 PF06097 Bacterial protein of unknown function (DUF945) DN756_09810 PF00962 Adenosine/AMP deaminase DN756_09815 PF13593 SBF-like CPA transporter family (DUF4137) DN756_09820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_09820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN756_09825 PF02311 AraC-like ligand binding domain DN756_09825 PF12833 Helix-turn-helix domain DN756_09830 PF02653 Branched-chain amino acid transport system / permease component DN756_09835 PF00005 ABC transporter DN756_09840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_09845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_09850 PF02610 L-arabinose isomerase DN756_09850 PF11762 L-arabinose isomerase C-terminal domain DN756_09855 PF00664 ABC transporter transmembrane region DN756_09855 PF03412 Peptidase C39 family DN756_09855 PF00005 ABC transporter DN756_09860 PF13533 Biotin-lipoyl like DN756_09865 PF03412 Peptidase C39 family DN756_09865 PF00005 ABC transporter DN756_09865 PF00664 ABC transporter transmembrane region DN756_09870 PF10754 Protein of unknown function (DUF2569) DN756_09875 PF02508 Rnf-Nqr subunit, membrane protein DN756_09880 PF04060 Putative Fe-S cluster DN756_09885 PF13375 RnfC Barrel sandwich hybrid domain DN756_09885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN756_09885 PF13237 4Fe-4S dicluster domain DN756_09885 PF10531 SLBB domain DN756_09890 PF12833 Helix-turn-helix domain DN756_09890 PF06445 GyrI-like small molecule binding domain DN756_09895 PF03116 NQR2, RnfD, RnfE family DN756_09900 PF04205 FMN-binding domain DN756_09905 PF02508 Rnf-Nqr subunit, membrane protein DN756_09910 PF10576 Iron-sulfur binding domain of endonuclease III DN756_09910 PF00633 Helix-hairpin-helix motif DN756_09910 PF00730 HhH-GPD superfamily base excision DNA repair protein DN756_09915 PF01370 NAD dependent epimerase/dehydratase family DN756_09920 PF07690 Major Facilitator Superfamily DN756_09925 PF00575 S1 RNA binding domain DN756_09925 PF08206 Ribonuclease B OB domain DN756_09925 PF17876 Cold shock domain DN756_09925 PF00773 RNB domain DN756_09930 PF13722 5TM C-terminal transporter carbon starvation CstA DN756_09930 PF02554 Carbon starvation protein CstA DN756_09935 PF04328 Selenoprotein, putative DN756_09940 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN756_09950 PF00596 Class II Aldolase and Adducin N-terminal domain DN756_09955 PF05433 Glycine zipper 2TM domain DN756_09960 PF01253 Translation initiation factor SUI1 DN756_09965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN756_09975 PF18073 Rubredoxin metal binding domain DN756_09980 PF06305 Lipopolysaccharide assembly protein A domain DN756_09985 PF01569 PAP2 superfamily DN756_09990 PF00925 GTP cyclohydrolase II DN756_09995 PF00330 Aconitase family (aconitate hydratase) DN756_09995 PF00694 Aconitase C-terminal domain DN756_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_10010 PF03466 LysR substrate binding domain DN756_10015 PF08272 Topoisomerase I zinc-ribbon-like DN756_10015 PF01131 DNA topoisomerase DN756_10015 PF01751 Toprim domain DN756_10015 PF01396 Topoisomerase DNA binding C4 zinc finger DN756_10025 PF10692 Protein of unknown function (DUF2498) DN756_10030 PF01343 Peptidase family S49 DN756_10030 PF08496 Peptidase family S49 N-terminal DN756_10035 PF00106 short chain dehydrogenase DN756_10040 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DN756_10045 PF00849 RNA pseudouridylate synthase DN756_10045 PF01479 S4 domain DN756_10050 PF01300 Telomere recombination DN756_10055 PF02811 PHP domain DN756_10070 PF04715 Anthranilate synthase component I, N terminal region DN756_10070 PF00425 chorismate binding enzyme DN756_10075 PF00117 Glutamine amidotransferase class-I DN756_10080 PF02885 Glycosyl transferase family, helical bundle domain DN756_10080 PF00591 Glycosyl transferase family, a/b domain DN756_10085 PF00218 Indole-3-glycerol phosphate synthase DN756_10085 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN756_10090 PF00291 Pyridoxal-phosphate dependent enzyme DN756_10095 PF00290 Tryptophan synthase alpha chain DN756_10105 PF03922 OmpW family DN756_10130 PF04279 Intracellular septation protein A DN756_10135 PF03061 Thioesterase superfamily DN756_10140 PF03544 Gram-negative bacterial TonB protein C-terminal DN756_10145 PF03795 YCII-related domain DN756_10160 PF13505 Outer membrane protein beta-barrel domain DN756_10170 PF13396 Phospholipase_D-nuclease N-terminal DN756_10170 PF13091 PLD-like domain DN756_10175 PF04269 Protein of unknown function, DUF440 DN756_10185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_10185 PF00005 ABC transporter DN756_10190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_10190 PF00005 ABC transporter DN756_10195 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_10195 PF00528 Binding-protein-dependent transport system inner membrane component DN756_10200 PF00528 Binding-protein-dependent transport system inner membrane component DN756_10205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_10210 PF01914 MarC family integral membrane protein DN756_10220 PF00171 Aldehyde dehydrogenase family DN756_10220 PF00465 Iron-containing alcohol dehydrogenase DN756_10230 PF00265 Thymidine kinase DN756_10235 PF00816 H-NS histone family DN756_10240 PF01797 Transposase IS200 like DN756_10245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN756_10245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN756_10245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN756_10250 PF00072 Response regulator receiver domain DN756_10255 PF02810 SEC-C motif DN756_10260 PF00551 Formyl transferase DN756_10260 PF01842 ACT domain DN756_10285 PF03466 LysR substrate binding domain DN756_10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_10290 PF03372 Endonuclease/Exonuclease/phosphatase family DN756_10295 PF00293 NUDIX domain DN756_10300 PF07383 Protein of unknown function (DUF1496) DN756_10305 PF01131 DNA topoisomerase DN756_10305 PF01751 Toprim domain DN756_10310 PF02769 AIR synthase related protein, C-terminal domain DN756_10310 PF00586 AIR synthase related protein, N-terminal domain DN756_10315 PF00881 Nitroreductase family DN756_10320 PF01343 Peptidase family S49 DN756_10325 PF00710 Asparaginase, N-terminal DN756_10325 PF17763 Glutaminase/Asparaginase C-terminal domain DN756_10330 PF00857 Isochorismatase family DN756_10335 PF07023 Protein of unknown function (DUF1315) DN756_10340 PF01641 SelR domain DN756_10345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN756_10345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN756_10350 PF01263 Aldose 1-epimerase DN756_10355 PF06629 MltA-interacting protein MipA DN756_10365 PF06798 PrkA serine protein kinase C-terminal domain DN756_10365 PF08298 PrkA AAA domain DN756_10370 PF04285 Protein of unknown function (DUF444) DN756_10380 PF03466 LysR substrate binding domain DN756_10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_10385 PF05726 Pirin C-terminal cupin domain DN756_10385 PF02678 Pirin DN756_10390 PF07690 Major Facilitator Superfamily DN756_10395 PF01266 FAD dependent oxidoreductase DN756_10400 PF04293 SpoVR like protein DN756_10405 PF07840 FadR C-terminal domain DN756_10405 PF00392 Bacterial regulatory proteins, gntR family DN756_10415 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DN756_10420 PF02600 Disulfide bond formation protein DsbB DN756_10435 PF00266 Aminotransferase class-V DN756_10445 PF03692 Putative zinc- or iron-chelating domain DN756_10450 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN756_10455 PF13406 Transglycosylase SLT domain DN756_10460 PF05166 YcgL domain DN756_10470 PF05209 Septum formation inhibitor MinC, N-terminal domain DN756_10470 PF03775 Septum formation inhibitor MinC, C-terminal domain DN756_10475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN756_10480 PF03776 Septum formation topological specificity factor MinE DN756_10485 PF00570 HRDC domain DN756_10485 PF01612 3'-5' exonuclease DN756_10490 PF00501 AMP-binding enzyme DN756_10490 PF13193 AMP-binding enzyme C-terminal domain DN756_10500 PF03843 Outer membrane lipoprotein Slp family DN756_10505 PF00814 Glycoprotease family DN756_10510 PF04851 Type III restriction enzyme, res subunit DN756_10510 PF13307 Helicase C-terminal domain DN756_10515 PF01042 Endoribonuclease L-PSP DN756_10520 PF00893 Small Multidrug Resistance protein DN756_10525 PF00893 Small Multidrug Resistance protein DN756_10530 PF01081 KDPG and KHG aldolase DN756_10540 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN756_10540 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN756_10545 PF01418 Helix-turn-helix domain, rpiR family DN756_10545 PF01380 SIS domain DN756_10550 PF02887 Pyruvate kinase, alpha/beta domain DN756_10550 PF00224 Pyruvate kinase, barrel domain DN756_10560 PF03279 Bacterial lipid A biosynthesis acyltransferase DN756_10565 PF01551 Peptidase family M23 DN756_10565 PF01476 LysM domain DN756_10565 PF08525 Opacity-associated protein A N-terminal motif DN756_10570 PF01297 Zinc-uptake complex component A periplasmic DN756_10575 PF00005 ABC transporter DN756_10580 PF00950 ABC 3 transport family DN756_10585 PF05491 RuvB C-terminal winged helix domain DN756_10585 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN756_10585 PF17864 RuvB AAA lid domain DN756_10590 PF01330 RuvA N terminal domain DN756_10590 PF07499 RuvA, C-terminal domain DN756_10600 PF02075 Crossover junction endodeoxyribonuclease RuvC DN756_10605 PF01709 Transcriptional regulator DN756_10610 PF00293 NUDIX domain DN756_10615 PF00152 tRNA synthetases class II (D, K and N) DN756_10615 PF02938 GAD domain DN756_10615 PF01336 OB-fold nucleic acid binding domain DN756_10620 PF01904 Protein of unknown function DUF72 DN756_10625 PF01124 MAPEG family DN756_10630 PF13649 Methyltransferase domain DN756_10635 PF08003 Protein of unknown function (DUF1698) DN756_10640 PF03932 CutC family DN756_10645 PF06185 YecM protein DN756_10650 PF05746 DALR anticodon binding domain DN756_10650 PF03485 Arginyl tRNA synthetase N terminal domain DN756_10650 PF00750 tRNA synthetases class I (R) DN756_10655 PF05860 haemagglutination activity domain DN756_10655 PF13332 Hemagglutinin repeat DN756_10660 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DN756_10660 PF17287 POTRA domain DN756_10660 PF08479 POTRA domain, ShlB-type DN756_10665 PF03023 Lipid II flippase MurJ DN756_10670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_10675 PF04337 Protein of unknown function, DUF480 DN756_10680 PF13302 Acetyltransferase (GNAT) domain DN756_10685 PF07690 Major Facilitator Superfamily DN756_10690 PF07273 Protein of unknown function (DUF1439) DN756_10695 PF02613 Nitrate reductase delta subunit DN756_10700 PF02811 PHP domain DN756_10710 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN756_10710 PF00480 ROK family DN756_10715 PF03009 Glycerophosphoryl diester phosphodiesterase family DN756_10720 PF08402 TOBE domain DN756_10720 PF00005 ABC transporter DN756_10725 PF00528 Binding-protein-dependent transport system inner membrane component DN756_10730 PF00528 Binding-protein-dependent transport system inner membrane component DN756_10740 PF03009 Glycerophosphoryl diester phosphodiesterase family DN756_10755 PF01740 STAS domain DN756_10755 PF00916 Sulfate permease family DN756_10760 PF00793 DAHP synthetase I family DN756_10765 PF13369 Transglutaminase-like superfamily DN756_10770 PF04247 Invasion gene expression up-regulator, SirB DN756_10775 PF13847 Methyltransferase domain DN756_10775 PF17827 PrmC N-terminal domain DN756_10780 PF03462 PCRF domain DN756_10780 PF00472 RF-1 domain DN756_10785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DN756_10785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN756_10785 PF01488 Shikimate / quinate 5-dehydrogenase DN756_10790 PF03550 Outer membrane lipoprotein LolB DN756_10795 PF08544 GHMP kinases C terminal DN756_10795 PF00288 GHMP kinases N terminal domain DN756_10800 PF14572 Phosphoribosyl synthetase-associated domain DN756_10800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN756_10805 PF10762 Protein of unknown function (DUF2583) DN756_10810 PF01195 Peptidyl-tRNA hydrolase DN756_10815 PF06071 Protein of unknown function (DUF933) DN756_10815 PF01926 50S ribosome-binding GTPase DN756_10835 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN756_10840 PF00486 Transcriptional regulatory protein, C terminal DN756_10840 PF00072 Response regulator receiver domain DN756_10845 PF00672 HAMP domain DN756_10845 PF00512 His Kinase A (phospho-acceptor) domain DN756_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_10885 PF08242 Methyltransferase domain DN756_10950 PF01370 NAD dependent epimerase/dehydratase family DN756_10955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN756_10955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN756_10965 PF05962 HutD DN756_10970 PF01979 Amidohydrolase family DN756_10975 PF07702 UTRA domain DN756_10975 PF00392 Bacterial regulatory proteins, gntR family DN756_10980 PF01979 Amidohydrolase family DN756_10990 PF00267 Gram-negative porin DN756_10995 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DN756_11000 PF04996 Succinylarginine dihydrolase DN756_11005 PF00171 Aldehyde dehydrogenase family DN756_11010 PF04958 Arginine N-succinyltransferase beta subunit DN756_11015 PF00202 Aminotransferase class-III DN756_11020 PF00155 Aminotransferase class I and II DN756_11020 PF00392 Bacterial regulatory proteins, gntR family DN756_11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_11030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DN756_11030 PF07730 Histidine kinase DN756_11030 PF00672 HAMP domain DN756_11035 PF01699 Sodium/calcium exchanger protein DN756_11040 PF01797 Transposase IS200 like DN756_11045 PF02562 PhoH-like protein DN756_11060 PF13994 PgaD-like protein DN756_11065 PF00535 Glycosyl transferase family 2 DN756_11070 PF14883 Hypothetical glycosyl hydrolase family 13 DN756_11070 PF01522 Polysaccharide deacetylase DN756_11080 PF00557 Metallopeptidase family M24 DN756_11085 PF09313 Domain of unknown function (DUF1971) DN756_11085 PF03848 Tellurite resistance protein TehB DN756_11095 PF00578 AhpC/TSA family DN756_11100 PF12704 MacB-like periplasmic core domain DN756_11100 PF02687 FtsX-like permease family DN756_11100 PF00005 ABC transporter DN756_11110 PF00005 ABC transporter DN756_11110 PF02687 FtsX-like permease family DN756_11110 PF12704 MacB-like periplasmic core domain DN756_11120 PF10634 Fe2+ transport protein DN756_11125 PF03239 Iron permease FTR1 family DN756_11135 PF04960 Glutaminase DN756_11145 PF08220 DeoR-like helix-turn-helix domain DN756_11145 PF00455 DeoR C terminal sensor domain DN756_11150 PF00324 Amino acid permease DN756_11160 PF02508 Rnf-Nqr subunit, membrane protein DN756_11170 PF04909 Amidohydrolase DN756_11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_11190 PF03466 LysR substrate binding domain DN756_11195 PF03328 HpcH/HpaI aldolase/citrate lyase family DN756_11200 PF01575 MaoC like domain DN756_11205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN756_11205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN756_11210 PF00196 Bacterial regulatory proteins, luxR family DN756_11210 PF00072 Response regulator receiver domain DN756_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_11215 PF00072 Response regulator receiver domain DN756_11215 PF00512 His Kinase A (phospho-acceptor) domain DN756_11215 PF00989 PAS fold DN756_11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_11215 PF01627 Hpt domain DN756_11225 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_11225 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_11230 PF13953 PapC C-terminal domain DN756_11230 PF00577 Outer membrane usher protein DN756_11230 PF13954 PapC N-terminal domain DN756_11240 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_11240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_11255 PF00005 ABC transporter DN756_11255 PF08402 TOBE domain DN756_11260 PF00528 Binding-protein-dependent transport system inner membrane component DN756_11265 PF00528 Binding-protein-dependent transport system inner membrane component DN756_11275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_11275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN756_11355 PF04984 Phage tail sheath protein subtilisin-like domain DN756_11355 PF17482 Phage tail sheath C-terminal domain DN756_11390 PF04606 Ogr/Delta-like zinc finger DN756_11395 PF00589 Phage integrase family DN756_11395 PF02899 Phage integrase, N-terminal SAM-like domain DN756_11450 PF00929 Exonuclease DN756_11455 PF02086 D12 class N6 adenine-specific DNA methyltransferase DN756_11460 PF00145 C-5 cytosine-specific DNA methylase DN756_11465 PF05840 Bacteriophage replication gene A protein (GPA) DN756_11590 PF17482 Phage tail sheath C-terminal domain DN756_11590 PF04984 Phage tail sheath protein subtilisin-like domain DN756_11625 PF04606 Ogr/Delta-like zinc finger DN756_11645 PF01066 CDP-alcohol phosphatidyltransferase DN756_11650 PF02151 UvrB/uvrC motif DN756_11650 PF08459 UvrC Helix-hairpin-helix N-terminal DN756_11650 PF01541 GIY-YIG catalytic domain DN756_11655 PF00196 Bacterial regulatory proteins, luxR family DN756_11655 PF00072 Response regulator receiver domain DN756_11660 PF10769 Protein of unknown function (DUF2594) DN756_11665 PF06942 GlpM protein DN756_11680 PF13505 Outer membrane protein beta-barrel domain DN756_11690 PF00324 Amino acid permease DN756_11695 PF01344 Kelch motif DN756_11700 PF03358 NADPH-dependent FMN reductase DN756_11705 PF04261 Dyp-type peroxidase family DN756_11710 PF13473 Cupredoxin-like domain DN756_11710 PF09375 Imelysin DN756_11715 PF03239 Iron permease FTR1 family DN756_11720 PF00474 Sodium:solute symporter family DN756_11730 PF00171 Aldehyde dehydrogenase family DN756_11730 PF14850 DNA-binding domain of Proline dehydrogenase DN756_11730 PF01619 Proline dehydrogenase DN756_11730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DN756_11760 PF00291 Pyridoxal-phosphate dependent enzyme DN756_11765 PF02899 Phage integrase, N-terminal SAM-like domain DN756_11770 PF04542 Sigma-70 region 2 DN756_11770 PF04539 Sigma-70 region 3 DN756_11770 PF04545 Sigma-70, region 4 DN756_11775 PF00669 Bacterial flagellin N-terminal helical region DN756_11775 PF08884 Flagellin D3 domain DN756_11775 PF00700 Bacterial flagellin C-terminal helical region DN756_11780 PF02465 Flagellar hook-associated protein 2 N-terminus DN756_11780 PF07196 Flagellin hook IN motif DN756_11780 PF07195 Flagellar hook-associated protein 2 C-terminus DN756_11785 PF02561 Flagellar protein FliS DN756_11790 PF05400 Flagellar protein FliT DN756_11800 PF12833 Helix-turn-helix domain DN756_11805 PF01966 HD domain DN756_11810 PF00730 HhH-GPD superfamily base excision DNA repair protein DN756_11830 PF02049 Flagellar hook-basal body complex protein FliE DN756_11835 PF08345 Flagellar M-ring protein C-terminal DN756_11835 PF01514 Secretory protein of YscJ/FliF family DN756_11840 PF14841 FliG middle domain DN756_11840 PF01706 FliG C-terminal domain DN756_11840 PF14842 FliG N-terminal domain DN756_11845 PF02108 Flagellar assembly protein FliH DN756_11850 PF18269 T3SS EscN ATPase C-terminal domain DN756_11850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_11855 PF02050 Flagellar FliJ protein DN756_11860 PF02120 Flagellar hook-length control protein FliK DN756_11865 PF03748 Flagellar basal body-associated protein FliL DN756_11870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN756_11870 PF02154 Flagellar motor switch protein FliM DN756_11875 PF16973 Flagellar motor switch protein FliN N-terminal DN756_11875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN756_11880 PF04347 Flagellar biosynthesis protein, FliO DN756_11885 PF00813 FliP family DN756_11890 PF01313 Bacterial export proteins, family 3 DN756_11895 PF01311 Bacterial export proteins, family 1 DN756_11905 PF00294 pfkB family carbohydrate kinase DN756_11910 PF02653 Branched-chain amino acid transport system / permease component DN756_11915 PF00005 ABC transporter DN756_11920 PF13407 Periplasmic binding protein domain DN756_11925 PF02653 Branched-chain amino acid transport system / permease component DN756_11930 PF00596 Class II Aldolase and Adducin N-terminal domain DN756_11935 PF04198 Putative sugar-binding domain DN756_11940 PF00669 Bacterial flagellin N-terminal helical region DN756_11945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_11945 PF00460 Flagella basal body rod protein DN756_11950 PF10135 Rod binding protein DN756_11950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN756_11955 PF02119 Flagellar P-ring protein DN756_11960 PF02107 Flagellar L-ring protein DN756_11965 PF00460 Flagella basal body rod protein DN756_11965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_11970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_11970 PF00460 Flagella basal body rod protein DN756_11975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_11975 PF00460 Flagella basal body rod protein DN756_11975 PF07559 Flagellar basal body protein FlaE DN756_11980 PF03963 Flagellar hook capping protein - N-terminal region DN756_11980 PF13860 FlgD Ig-like domain DN756_11980 PF13861 FlgD Tudor-like domain DN756_11985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN756_11985 PF00460 Flagella basal body rod protein DN756_11990 PF00460 Flagella basal body rod protein DN756_11995 PF17656 FlgA N-terminal domain DN756_11995 PF13144 Chaperone for flagella basal body P-ring formation DN756_12000 PF04316 Anti-sigma-28 factor, FlgM DN756_12005 PF05130 FlgN protein DN756_12010 PF11924 Inverse autotransporter, beta-domain DN756_12010 PF09134 Invasin, domain 3 DN756_12010 PF07979 Intimin C-type lectin domain DN756_12010 PF02369 Bacterial Ig-like domain (group 1) DN756_12015 PF06366 Flagellar protein FlhE DN756_12020 PF00771 FHIPEP family DN756_12025 PF01312 FlhB HrpN YscU SpaS Family DN756_12045 PF10709 Protein of unknown function (DUF2511) DN756_12055 PF04234 CopC domain DN756_12060 PF00210 Ferritin-like domain DN756_12065 PF06440 DNA polymerase III, theta subunit DN756_12070 PF00561 alpha/beta hydrolase fold DN756_12075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DN756_12075 PF00326 Prolyl oligopeptidase family DN756_12080 PF13995 YebF-like protein DN756_12090 PF07130 YebG protein DN756_12095 PF03880 DbpA RNA binding domain DN756_12095 PF00270 DEAD/DEAH box helicase DN756_12095 PF00271 Helicase conserved C-terminal domain DN756_12100 PF02222 ATP-grasp domain DN756_12105 PF03701 Uncharacterised protein family (UPF0181) DN756_12110 PF00425 chorismate binding enzyme DN756_12110 PF04715 Anthranilate synthase component I, N terminal region DN756_12115 PF00293 NUDIX domain DN756_12120 PF03315 Serine dehydratase beta chain DN756_12120 PF03313 Serine dehydratase alpha chain DN756_12125 PF01613 Flavin reductase like domain DN756_12130 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DN756_12130 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DN756_12135 PF07690 Major Facilitator Superfamily DN756_12140 PF03328 HpcH/HpaI aldolase/citrate lyase family DN756_12145 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN756_12150 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DN756_12155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN756_12160 PF00171 Aldehyde dehydrogenase family DN756_12165 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN756_12170 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN756_12175 PF01047 MarR family DN756_12185 PF03471 Transporter associated domain DN756_12185 PF03741 Integral membrane protein TerC family DN756_12190 PF03610 PTS system fructose IIA component DN756_12190 PF03830 PTS system sorbose subfamily IIB component DN756_12195 PF03609 PTS system sorbose-specific iic component DN756_12200 PF03613 PTS system mannose/fructose/sorbose family IID component DN756_12205 PF06173 Protein of unknown function (DUF986) DN756_12210 PF02659 Putative manganese efflux pump DN756_12215 PF07715 TonB-dependent Receptor Plug Domain DN756_12215 PF00593 TonB dependent receptor DN756_12220 PF05231 MASE1 DN756_12220 PF13426 PAS domain DN756_12220 PF08448 PAS fold DN756_12220 PF08447 PAS fold DN756_12220 PF00990 Diguanylate cyclase, GGDEF domain DN756_12220 PF00563 EAL domain DN756_12230 PF13847 Methyltransferase domain DN756_12240 PF00313 'Cold-shock' DNA-binding domain DN756_12245 PF10736 Protein of unknown function (DUF2627) DN756_12255 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP DN756_12260 PF00324 Amino acid permease DN756_12280 PF13974 YebO-like protein DN756_12285 PF13998 MgrB protein DN756_12290 PF13996 YobH-like protein DN756_12295 PF10964 Protein of unknown function (DUF2766) DN756_12300 PF12833 Helix-turn-helix domain DN756_12310 PF00664 ABC transporter transmembrane region DN756_12310 PF00005 ABC transporter DN756_12330 PF06167 Glucose-regulated metallo-peptidase M90 DN756_12340 PF00356 Bacterial regulatory proteins, lacI family DN756_12340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_12345 PF01306 LacY proton/sugar symporter DN756_12350 PF16874 Glycosyl hydrolase family 36 C-terminal domain DN756_12350 PF16875 Glycosyl hydrolase family 36 N-terminal domain DN756_12360 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DN756_12360 PF01648 4'-phosphopantetheinyl transferase superfamily DN756_12365 PF03480 Bacterial extracellular solute-binding protein, family 7 DN756_12375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN756_12380 PF00196 Bacterial regulatory proteins, luxR family DN756_12380 PF00072 Response regulator receiver domain DN756_12390 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DN756_12400 PF01522 Polysaccharide deacetylase DN756_12410 PF01554 MatE DN756_12415 PF00764 Arginosuccinate synthase DN756_12420 PF01070 FMN-dependent dehydrogenase DN756_12430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN756_12430 PF13378 Enolase C-terminal domain-like DN756_12435 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN756_12450 PF04134 Protein of unknown function, DUF393 DN756_12455 PF07690 Major Facilitator Superfamily DN756_12460 PF11924 Inverse autotransporter, beta-domain DN756_12460 PF09134 Invasin, domain 3 DN756_12460 PF02369 Bacterial Ig-like domain (group 1) DN756_12465 PF04363 Protein of unknown function (DUF496) DN756_12475 PF00929 Exonuclease DN756_12475 PF08411 Exonuclease C-terminal DN756_12490 PF13520 Amino acid permease DN756_12500 PF00465 Iron-containing alcohol dehydrogenase DN756_12505 PF00005 ABC transporter DN756_12510 PF02653 Branched-chain amino acid transport system / permease component DN756_12515 PF01370 NAD dependent epimerase/dehydratase family DN756_12525 PF01634 ATP phosphoribosyltransferase DN756_12525 PF08029 HisG, C-terminal domain DN756_12530 PF00815 Histidinol dehydrogenase DN756_12535 PF00155 Aminotransferase class I and II DN756_12540 PF00475 Imidazoleglycerol-phosphate dehydratase DN756_12545 PF00117 Glutamine amidotransferase class-I DN756_12550 PF00977 Histidine biosynthesis protein DN756_12555 PF00977 Histidine biosynthesis protein DN756_12560 PF01502 Phosphoribosyl-AMP cyclohydrolase DN756_12560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN756_12570 PF01797 Transposase IS200 like DN756_12575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN756_12575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN756_12580 PF00483 Nucleotidyl transferase DN756_12585 PF00483 Nucleotidyl transferase DN756_12590 PF06276 Ferric iron reductase FhuF-like transporter DN756_12590 PF04183 IucA / IucC family DN756_12595 PF00593 TonB dependent receptor DN756_12595 PF07660 Secretin and TonB N terminus short domain DN756_12595 PF07715 TonB-dependent Receptor Plug Domain DN756_12600 PF01497 Periplasmic binding protein DN756_12605 PF01032 FecCD transport family DN756_12610 PF01032 FecCD transport family DN756_12615 PF00005 ABC transporter DN756_12620 PF06276 Ferric iron reductase FhuF-like transporter DN756_12620 PF04183 IucA / IucC family DN756_12630 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DN756_12635 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN756_12640 PF11575 FhuF 2Fe-2S C-terminal domain DN756_12640 PF06276 Ferric iron reductase FhuF-like transporter DN756_12645 PF03741 Integral membrane protein TerC family DN756_12645 PF00571 CBS domain DN756_12645 PF03471 Transporter associated domain DN756_12650 PF05170 AsmA family DN756_12655 PF00692 dUTPase DN756_12660 PF00485 Phosphoribulokinase / Uridine kinase family DN756_12665 PF10609 NUBPL iron-transfer P-loop NTPase DN756_12670 PF01588 Putative tRNA binding domain DN756_12670 PF09334 tRNA synthetases class I (M) DN756_12690 PF07690 Major Facilitator Superfamily DN756_12695 PF03788 LrgA family DN756_12700 PF04172 LrgB-like family DN756_12705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN756_12705 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DN756_12710 PF03949 Malic enzyme, NAD binding domain DN756_12710 PF00390 Malic enzyme, N-terminal domain DN756_12715 PF02698 DUF218 domain DN756_12720 PF02653 Branched-chain amino acid transport system / permease component DN756_12725 PF00005 ABC transporter DN756_12730 PF13407 Periplasmic binding protein domain DN756_12735 PF04235 Protein of unknown function (DUF418) DN756_12740 PF01227 GTP cyclohydrolase I DN756_12745 PF06779 Uncharacterised MFS-type transporter YbfB DN756_12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_12750 PF03466 LysR substrate binding domain DN756_12755 PF08240 Alcohol dehydrogenase GroES-like domain DN756_12755 PF00107 Zinc-binding dehydrogenase DN756_12760 PF00756 Putative esterase DN756_12775 PF13533 Biotin-lipoyl like DN756_12780 PF00005 ABC transporter DN756_12790 PF03454 MoeA C-terminal region (domain IV) DN756_12790 PF00994 Probable molybdopterin binding domain DN756_12790 PF03453 MoeA N-terminal region (domain I and II) DN756_12795 PF00899 ThiF family DN756_12805 PF00005 ABC transporter DN756_12805 PF12848 ABC transporter DN756_12905 PF00698 Acyl transferase domain DN756_12910 PF00550 Phosphopantetheine attachment site DN756_12925 PF00378 Enoyl-CoA hydratase/isomerase DN756_12935 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DN756_12935 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DN756_12945 PF00109 Beta-ketoacyl synthase, N-terminal domain DN756_12945 PF02801 Beta-ketoacyl synthase, C-terminal domain DN756_12950 PF07977 FabA-like domain DN756_12965 PF01565 FAD binding domain DN756_12965 PF08031 Berberine and berberine like DN756_12970 PF11647 Membrane Localization Domain DN756_12985 PF04358 DsrC like protein DN756_12990 PF00708 Acylphosphatase DN756_12995 PF10672 S-adenosylmethionine-dependent methyltransferase DN756_12995 PF17785 PUA-like domain DN756_13000 PF08755 Hemimethylated DNA-binding protein YccV like DN756_13005 PF13380 CoA binding domain DN756_13010 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DN756_13015 PF02142 MGS-like domain DN756_13020 PF00580 UvrD/REP helicase N-terminal domain DN756_13020 PF12462 DNA helicase IV / RNA helicase N terminal DN756_13020 PF13361 UvrD-like helicase C-terminal domain DN756_13025 PF03733 Inner membrane component domain DN756_13030 PF12805 FUSC-like inner membrane protein yccS DN756_13035 PF04993 TfoX N-terminal domain DN756_13035 PF04994 TfoX C-terminal domain DN756_13040 PF03846 Cell division inhibitor SulA DN756_13045 PF01389 OmpA-like transmembrane domain DN756_13045 PF00691 OmpA family DN756_13050 PF01797 Transposase IS200 like DN756_13055 PF06303 MatP N-terminal domain DN756_13055 PF17414 MatP C-terminal ribbon-helix-helix domain DN756_13060 PF05362 Lon protease (S16) C-terminal proteolytic domain DN756_13060 PF13654 AAA domain DN756_13065 PF07977 FabA-like domain DN756_13075 PF02801 Beta-ketoacyl synthase, C-terminal domain DN756_13075 PF00109 Beta-ketoacyl synthase, N-terminal domain DN756_13080 PF04957 Ribosome modulation factor DN756_13090 PF03886 ABC-type transport auxiliary lipoprotein component DN756_13095 PF02470 MlaD protein DN756_13100 PF04403 Paraquat-inducible protein A DN756_13105 PF00005 ABC transporter DN756_13105 PF16326 ABC transporter C-terminal domain DN756_13105 PF12848 ABC transporter DN756_13110 PF02926 THUMP domain DN756_13110 PF01170 Putative RNA methylase family UPF0020 DN756_13110 PF10672 S-adenosylmethionine-dependent methyltransferase DN756_13115 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_13115 PF03473 MOSC domain DN756_13115 PF03476 MOSC N-terminal beta barrel domain DN756_13120 PF07126 Cell-division protein ZapC DN756_13125 PF01180 Dihydroorotate dehydrogenase DN756_13130 PF01433 Peptidase family M1 domain DN756_13130 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DN756_13130 PF11940 Domain of unknown function (DUF3458) Ig-like fold DN756_13135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN756_13135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN756_13140 PF00152 tRNA synthetases class II (D, K and N) DN756_13140 PF01336 OB-fold nucleic acid binding domain DN756_13145 PF00267 Gram-negative porin DN756_13150 PF00155 Aminotransferase class I and II DN756_13155 PF00753 Metallo-beta-lactamase superfamily DN756_13160 PF05951 Bacterial protein of unknown function (DUF882) DN756_13165 PF01471 Putative peptidoglycan binding domain DN756_13165 PF03734 L,D-transpeptidase catalytic domain DN756_13170 PF04310 MukB N-terminal DN756_13170 PF16330 MukB hinge domain DN756_13175 PF04288 MukE-like family DN756_13180 PF17192 MukF middle domain DN756_13180 PF03882 MukF winged-helix domain DN756_13180 PF17193 MukF C-terminal domain DN756_13195 PF01636 Phosphotransferase enzyme family DN756_13205 PF02348 Cytidylyltransferase DN756_13210 PF03966 Trm112p-like protein DN756_13215 PF00313 'Cold-shock' DNA-binding domain DN756_13225 PF07063 Domain of unknown function (DUF1338) DN756_13230 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DN756_13235 PF00664 ABC transporter transmembrane region DN756_13235 PF00005 ABC transporter DN756_13250 PF00216 Bacterial DNA-binding protein DN756_13255 PF00575 S1 RNA binding domain DN756_13260 PF02224 Cytidylate kinase DN756_13265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN756_13270 PF00266 Aminotransferase class-V DN756_13285 PF17763 Glutaminase/Asparaginase C-terminal domain DN756_13285 PF00710 Asparaginase, N-terminal DN756_13290 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DN756_13290 PF18381 YcaO cyclodehydratase C-terminal domain DN756_13295 PF01226 Formate/nitrite transporter DN756_13300 PF02901 Pyruvate formate lyase-like DN756_13300 PF01228 Glycine radical DN756_13310 PF04055 Radical SAM superfamily DN756_13315 PF07690 Major Facilitator Superfamily DN756_13320 PF02403 Seryl-tRNA synthetase N-terminal domain DN756_13320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN756_13325 PF16193 AAA C-terminal domain DN756_13325 PF12002 MgsA AAA+ ATPase C terminal DN756_13325 PF00004 ATPase family associated with various cellular activities (AAA) DN756_13330 PF03548 Outer membrane lipoprotein carrier protein LolA DN756_13335 PF17854 FtsK alpha domain DN756_13335 PF09397 Ftsk gamma domain DN756_13335 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DN756_13335 PF01580 FtsK/SpoIIIE family DN756_13340 PF01037 Lrp/AsnC ligand binding domain DN756_13345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_13350 PF00664 ABC transporter transmembrane region DN756_13350 PF00005 ABC transporter DN756_13355 PF00005 ABC transporter DN756_13355 PF00664 ABC transporter transmembrane region DN756_13360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DN756_13365 PF01176 Translation initiation factor 1A / IF-1 DN756_13370 PF02861 Clp amino terminal domain, pathogenicity island component DN756_13370 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_13370 PF17871 AAA lid domain DN756_13370 PF07724 AAA domain (Cdc48 subfamily) DN756_13370 PF00004 ATPase family associated with various cellular activities (AAA) DN756_13375 PF02617 ATP-dependent Clp protease adaptor protein ClpS DN756_13385 PF00313 'Cold-shock' DNA-binding domain DN756_13390 PF02687 FtsX-like permease family DN756_13390 PF12704 MacB-like periplasmic core domain DN756_13390 PF00005 ABC transporter DN756_13395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_13400 PF04393 Protein of unknown function (DUF535) DN756_13405 PF11398 Protein of unknown function (DUF2813) DN756_13410 PF03956 Lysine exporter LysO DN756_13415 PF03063 Prismane/CO dehydrogenase family DN756_13420 PF00175 Oxidoreductase NAD-binding domain DN756_13420 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_13420 PF00970 Oxidoreductase FAD-binding domain DN756_13425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_13425 PF00205 Thiamine pyrophosphate enzyme, central domain DN756_13425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_13430 PF01212 Beta-eliminating lyase DN756_13435 PF11066 Protein of unknown function (DUF2867) DN756_13435 PF13460 NAD(P)H-binding DN756_13440 PF01370 NAD dependent epimerase/dehydratase family DN756_13445 PF12883 Protein of unknown function (DUF3828) DN756_13450 PF01817 Chorismate mutase type II DN756_13455 PF00005 ABC transporter DN756_13460 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_13465 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13470 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13475 PF00892 EamA-like transporter family DN756_13480 PF10100 Staphylopine dehydrogenase DN756_13485 PF03059 Nicotianamine synthase protein DN756_13490 PF00005 ABC transporter DN756_13495 PF01032 FecCD transport family DN756_13515 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_13520 PF05958 tRNA (Uracil-5-)-methyltransferase DN756_13525 PF10767 Protein of unknown function (DUF2593) DN756_13530 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13535 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13540 PF08402 TOBE domain DN756_13540 PF00005 ABC transporter DN756_13545 PF13416 Bacterial extracellular solute-binding protein DN756_13550 PF10722 Putative bacterial sensory transduction regulator DN756_13560 PF07214 Protein of unknown function (DUF1418) DN756_13570 PF00462 Glutaredoxin DN756_13575 PF02080 TrkA-C domain DN756_13575 PF06826 Predicted Permease Membrane Region DN756_13590 PF01569 PAP2 superfamily DN756_13595 PF01791 DeoC/LacD family aldolase DN756_13600 PF00455 DeoR C terminal sensor domain DN756_13600 PF08220 DeoR-like helix-turn-helix domain DN756_13610 PF07943 Penicillin-binding protein 5, C-terminal domain DN756_13610 PF00768 D-alanyl-D-alanine carboxypeptidase DN756_13615 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13620 PF00005 ABC transporter DN756_13620 PF09383 NIL domain DN756_13625 PF03180 NLPA lipoprotein DN756_13640 PF00043 Glutathione S-transferase, C-terminal domain DN756_13640 PF13417 Glutathione S-transferase, N-terminal domain DN756_13645 PF07715 TonB-dependent Receptor Plug Domain DN756_13645 PF00593 TonB dependent receptor DN756_13650 PF00005 ABC transporter DN756_13655 PF01032 FecCD transport family DN756_13665 PF00324 Amino acid permease DN756_13670 PF03466 LysR substrate binding domain DN756_13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_13675 PF03601 Conserved hypothetical protein 698 DN756_13680 PF01261 Xylose isomerase-like TIM barrel DN756_13685 PF13953 PapC C-terminal domain DN756_13685 PF00577 Outer membrane usher protein DN756_13685 PF13954 PapC N-terminal domain DN756_13690 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_13690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_13700 PF17550 Family of unknown function DN756_13705 PF00486 Transcriptional regulatory protein, C terminal DN756_13710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN756_13710 PF02378 Phosphotransferase system, EIIC DN756_13715 PF00294 pfkB family carbohydrate kinase DN756_13720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN756_13720 PF00381 PTS HPr component phosphorylation site DN756_13725 PF00293 NUDIX domain DN756_13730 PF02653 Branched-chain amino acid transport system / permease component DN756_13735 PF00005 ABC transporter DN756_13745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN756_13750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_13750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_13755 PF00171 Aldehyde dehydrogenase family DN756_13765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN756_13765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN756_13765 PF01842 ACT domain DN756_13775 PF03692 Putative zinc- or iron-chelating domain DN756_13780 PF03222 Tryptophan/tyrosine permease family DN756_13785 PF09285 Elongation factor P, C-terminal DN756_13785 PF01132 Elongation factor P (EF-P) OB domain DN756_13785 PF08207 Elongation factor P (EF-P) KOW-like domain DN756_13790 PF03786 D-mannonate dehydratase (UxuA) DN756_13795 PF08125 Mannitol dehydrogenase C-terminal domain DN756_13795 PF01232 Mannitol dehydrogenase Rossmann domain DN756_13800 PF00392 Bacterial regulatory proteins, gntR family DN756_13800 PF07729 FCD domain DN756_13810 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN756_13810 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN756_13815 PF01569 PAP2 superfamily DN756_13820 PF00877 NlpC/P60 family DN756_13825 PF00563 EAL domain DN756_13825 PF12792 CSS motif domain associated with EAL DN756_13830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_13835 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13840 PF00528 Binding-protein-dependent transport system inner membrane component DN756_13840 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_13845 PF00005 ABC transporter DN756_13845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_13850 PF13989 YejG-like protein DN756_13855 PF07690 Major Facilitator Superfamily DN756_13860 PF00849 RNA pseudouridylate synthase DN756_13860 PF01479 S4 domain DN756_13865 PF00271 Helicase conserved C-terminal domain DN756_13865 PF04851 Type III restriction enzyme, res subunit DN756_13870 PF01386 Ribosomal L25p family DN756_13875 PF04245 37-kD nucleoid-associated bacterial protein DN756_13880 PF07208 Protein of unknown function (DUF1414) DN756_13885 PF11893 Domain of unknown function (DUF3413) DN756_13885 PF00884 Sulfatase DN756_13930 PF00232 Glycosyl hydrolase family 1 DN756_13935 PF01418 Helix-turn-helix domain, rpiR family DN756_13935 PF01380 SIS domain DN756_13955 PF04865 Baseplate J-like protein DN756_13995 PF04984 Phage tail sheath protein subtilisin-like domain DN756_13995 PF17482 Phage tail sheath C-terminal domain DN756_14015 PF01261 Xylose isomerase-like TIM barrel DN756_14020 PF08220 DeoR-like helix-turn-helix domain DN756_14020 PF00455 DeoR C terminal sensor domain DN756_14030 PF07005 Sugar-binding N-terminal domain DN756_14030 PF17042 Nucleotide-binding C-terminal domain DN756_14035 PF06530 Phage antitermination protein Q DN756_14040 PF00717 Peptidase S24-like DN756_14040 PF01381 Helix-turn-helix DN756_14045 PF06183 DinI-like family DN756_14050 PF01278 Omptin family DN756_14060 PF02743 Cache domain DN756_14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN756_14060 PF00672 HAMP domain DN756_14065 PF12706 Beta-lactamase superfamily domain DN756_14075 PF00144 Beta-lactamase DN756_14100 PF00267 Gram-negative porin DN756_14105 PF07690 Major Facilitator Superfamily DN756_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_14110 PF16359 RcsD-ABL domain DN756_14110 PF01627 Hpt domain DN756_14115 PF00072 Response regulator receiver domain DN756_14115 PF00196 Bacterial regulatory proteins, luxR family DN756_14120 PF09456 RcsC Alpha-Beta-Loop (ABL) DN756_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_14120 PF00072 Response regulator receiver domain DN756_14120 PF00512 His Kinase A (phospho-acceptor) domain DN756_14125 PF03989 DNA gyrase C-terminal domain, beta-propeller DN756_14125 PF00521 DNA gyrase/topoisomerase IV, subunit A DN756_14135 PF02867 Ribonucleotide reductase, barrel domain DN756_14135 PF00317 Ribonucleotide reductase, all-alpha domain DN756_14135 PF03477 ATP cone domain DN756_14140 PF00268 Ribonucleotide reductase, small chain DN756_14145 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_14150 PF03974 Ecotin DN756_14155 PF00994 Probable molybdopterin binding domain DN756_14165 PF03222 Tryptophan/tyrosine permease family DN756_14170 PF07437 YfaZ precursor DN756_14175 PF00199 Catalase DN756_14175 PF06628 Catalase-related immune-responsive DN756_14180 PF13307 Helicase C-terminal domain DN756_14180 PF06733 DEAD_2 DN756_14185 PF00267 Gram-negative porin DN756_14190 PF00892 EamA-like transporter family DN756_14200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DN756_14200 PF01276 Orn/Lys/Arg decarboxylase, major domain DN756_14200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN756_14205 PF13520 Amino acid permease DN756_14210 PF00528 Binding-protein-dependent transport system inner membrane component DN756_14215 PF00005 ABC transporter DN756_14220 PF00528 Binding-protein-dependent transport system inner membrane component DN756_14225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN756_14230 PF00581 Rhodanese-like domain DN756_14245 PF00005 ABC transporter DN756_14250 PF00005 ABC transporter DN756_14255 PF02653 Branched-chain amino acid transport system / permease component DN756_14260 PF02653 Branched-chain amino acid transport system / permease component DN756_14265 PF00158 Sigma-54 interaction domain DN756_14265 PF13188 PAS domain DN756_14265 PF02954 Bacterial regulatory protein, Fis family DN756_14270 PF07308 Protein of unknown function (DUF1456) DN756_14275 PF00528 Binding-protein-dependent transport system inner membrane component DN756_14280 PF00528 Binding-protein-dependent transport system inner membrane component DN756_14290 PF00005 ABC transporter DN756_14295 PF04226 Transglycosylase associated protein DN756_14305 PF01844 HNH endonuclease DN756_14315 PF09330 D-lactate dehydrogenase, membrane binding DN756_14315 PF01565 FAD binding domain DN756_14320 PF00768 D-alanyl-D-alanine carboxypeptidase DN756_14330 PF01207 Dihydrouridine synthase (Dus) DN756_14340 PF01797 Transposase IS200 like DN756_14385 PF00271 Helicase conserved C-terminal domain DN756_14385 PF00270 DEAD/DEAH box helicase DN756_14390 PF09209 Tetracyclin repressor-like, C-terminal domain DN756_14390 PF00440 Bacterial regulatory proteins, tetR family DN756_14395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_14400 PF00005 ABC transporter DN756_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_14425 PF03466 LysR substrate binding domain DN756_14430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN756_14435 PF00072 Response regulator receiver domain DN756_14435 PF00158 Sigma-54 interaction domain DN756_14435 PF02954 Bacterial regulatory protein, Fis family DN756_14440 PF00512 His Kinase A (phospho-acceptor) domain DN756_14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_14445 PF13801 Heavy-metal resistance DN756_14450 PF03825 Nucleoside H+ symporter DN756_14455 PF01048 Phosphorylase superfamily DN756_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_14465 PF03466 LysR substrate binding domain DN756_14470 PF02028 BCCT, betaine/carnitine/choline family transporter DN756_14475 PF13977 BetI-type transcriptional repressor, C-terminal DN756_14475 PF00440 Bacterial regulatory proteins, tetR family DN756_14480 PF00171 Aldehyde dehydrogenase family DN756_14485 PF00732 GMC oxidoreductase DN756_14485 PF05199 GMC oxidoreductase DN756_14490 PF01027 Inhibitor of apoptosis-promoting Bax1 DN756_14495 PF02391 MoaE protein DN756_14500 PF02597 ThiS family DN756_14505 PF01967 MoaC family DN756_14510 PF04055 Radical SAM superfamily DN756_14510 PF06463 Molybdenum Cofactor Synthesis C DN756_14515 PF01933 Uncharacterised protein family UPF0052 DN756_14520 PF09905 DNA-binding protein VF530 DN756_14525 PF00271 Helicase conserved C-terminal domain DN756_14525 PF04851 Type III restriction enzyme, res subunit DN756_14525 PF02151 UvrB/uvrC motif DN756_14525 PF17757 UvrB interaction domain DN756_14525 PF12344 Ultra-violet resistance protein B DN756_14540 PF08241 Methyltransferase domain DN756_14545 PF00155 Aminotransferase class I and II DN756_14550 PF06968 Biotin and Thiamin Synthesis associated domain DN756_14550 PF04055 Radical SAM superfamily DN756_14555 PF00202 Aminotransferase class-III DN756_14560 PF10282 Lactonase, 7-bladed beta-propeller DN756_14570 PF03459 TOBE domain DN756_14570 PF00005 ABC transporter DN756_14575 PF00528 Binding-protein-dependent transport system inner membrane component DN756_14585 PF10766 Multidrug efflux pump-associated protein AcrZ DN756_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_14590 PF03459 TOBE domain DN756_14595 PF00005 ABC transporter DN756_14605 PF16363 GDP-mannose 4,6 dehydratase DN756_14610 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DN756_14610 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DN756_14615 PF08544 GHMP kinases C terminal DN756_14615 PF10509 Galactokinase galactose-binding signature DN756_14615 PF00288 GHMP kinases N terminal domain DN756_14620 PF01263 Aldose 1-epimerase DN756_14635 PF00300 Histidine phosphatase superfamily (branch 1) DN756_14640 PF00793 DAHP synthetase I family DN756_14645 PF01545 Cation efflux family DN756_14650 PF04973 Nicotinamide mononucleotide transporter DN756_14655 PF02445 Quinolinate synthetase A protein DN756_14690 PF13174 Tetratricopeptide repeat DN756_14690 PF16331 TolA binding protein trimerisation DN756_14695 PF00691 OmpA family DN756_14700 PF07676 WD40-like Beta Propeller Repeat DN756_14700 PF04052 TolB amino-terminal domain DN756_14705 PF06519 TolA C-terminal DN756_14705 PF06519 TolA C-terminal DN756_14710 PF02472 Biopolymer transport protein ExbD/TolR DN756_14715 PF01618 MotA/TolQ/ExbB proton channel family DN756_14720 PF03061 Thioesterase superfamily DN756_14725 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DN756_14730 PF08173 Membrane bound YbgT-like protein DN756_14735 PF02322 Cytochrome bd terminal oxidase subunit II DN756_14740 PF01654 Cytochrome bd terminal oxidase subunit I DN756_14745 PF00549 CoA-ligase DN756_14745 PF02629 CoA binding domain DN756_14750 PF00549 CoA-ligase DN756_14750 PF08442 ATP-grasp domain DN756_14755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN756_14755 PF00364 Biotin-requiring enzyme DN756_14755 PF02817 e3 binding domain DN756_14760 PF02779 Transketolase, pyrimidine binding domain DN756_14760 PF16870 2-oxoglutarate dehydrogenase C-terminal DN756_14760 PF00676 Dehydrogenase E1 component DN756_14760 PF16078 2-oxoglutarate dehydrogenase N-terminus DN756_14765 PF13085 2Fe-2S iron-sulfur cluster binding domain DN756_14770 PF00890 FAD binding domain DN756_14770 PF02910 Fumarate reductase flavoprotein C-term DN756_14775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN756_14780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN756_14785 PF00285 Citrate synthase, C-terminal domain DN756_14790 PF01025 GrpE DN756_14795 PF01513 ATP-NAD kinase DN756_14800 PF02463 RecF/RecN/SMC N terminal domain DN756_14805 PF04355 SmpA / OmlA family DN756_14810 PF03658 RnfH family Ubiquitin DN756_14815 PF03364 Polyketide cyclase / dehydrase and lipid transport DN756_14820 PF01668 SmpB protein DN756_14830 PF00589 Phage integrase family DN756_14830 PF13356 Arm DNA-binding domain DN756_14840 PF00589 Phage integrase family DN756_14840 PF13356 Arm DNA-binding domain DN756_14850 PF12697 Alpha/beta hydrolase family DN756_14855 PF01402 Ribbon-helix-helix protein, copG family DN756_14865 PF00258 Flavodoxin DN756_14870 PF01475 Ferric uptake regulator family DN756_14875 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DN756_14875 PF03173 Putative carbohydrate binding domain DN756_14875 PF02838 Glycosyl hydrolase family 20, domain 2 DN756_14875 PF00728 Glycosyl hydrolase family 20, catalytic domain DN756_14880 PF03573 outer membrane porin, OprD family DN756_14885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DN756_14885 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN756_14890 PF01797 Transposase IS200 like DN756_14900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN756_14900 PF00367 phosphotransferase system, EIIB DN756_14900 PF02378 Phosphotransferase system, EIIC DN756_14905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN756_14910 PF01979 Amidohydrolase family DN756_14915 PF01047 MarR family DN756_14915 PF00480 ROK family DN756_14920 PF13344 Haloacid dehalogenase-like hydrolase DN756_14925 PF13537 Glutamine amidotransferase domain DN756_14925 PF00733 Asparagine synthase DN756_14965 PF01494 FAD binding domain DN756_14970 PF00919 Uncharacterized protein family UPF0004 DN756_14970 PF01938 TRAM domain DN756_14970 PF04055 Radical SAM superfamily DN756_14975 PF02562 PhoH-like protein DN756_14980 PF02130 Uncharacterized protein family UPF0054 DN756_14985 PF00571 CBS domain DN756_14985 PF03471 Transporter associated domain DN756_14990 PF00795 Carbon-nitrogen hydrolase DN756_14995 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_15000 PF00528 Binding-protein-dependent transport system inner membrane component DN756_15005 PF00528 Binding-protein-dependent transport system inner membrane component DN756_15010 PF00005 ABC transporter DN756_15015 PF07295 Zinc-ribbon containing domain DN756_15020 PF13603 Leucyl-tRNA synthetase, Domain 2 DN756_15020 PF08264 Anticodon-binding domain of tRNA DN756_15020 PF00133 tRNA synthetases class I (I, L, M and V) DN756_15025 PF04390 Lipopolysaccharide-assembly DN756_15030 PF06144 DNA polymerase III, delta subunit DN756_15030 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DN756_15035 PF01467 Cytidylyltransferase-like DN756_15045 PF02590 Predicted SPOUT methyltransferase DN756_15050 PF03717 Penicillin-binding Protein dimerisation domain DN756_15050 PF00905 Penicillin binding protein transpeptidase domain DN756_15055 PF01098 Cell cycle protein DN756_15060 PF03330 Lytic transglycolase DN756_15060 PF05036 Sporulation related domain DN756_15065 PF00768 D-alanyl-D-alanine carboxypeptidase DN756_15065 PF07943 Penicillin-binding protein 5, C-terminal domain DN756_15070 PF04359 Protein of unknown function (DUF493) DN756_15075 PF03099 Biotin/lipoate A/B protein ligase family DN756_15080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DN756_15080 PF04055 Radical SAM superfamily DN756_15090 PF02416 mttA/Hcf106 family DN756_15095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN756_15100 PF00313 'Cold-shock' DNA-binding domain DN756_15105 PF00313 'Cold-shock' DNA-binding domain DN756_15110 PF00196 Bacterial regulatory proteins, luxR family DN756_15135 PF00005 ABC transporter DN756_15135 PF00664 ABC transporter transmembrane region DN756_15145 PF04962 KduI/IolB family DN756_15150 PF01261 Xylose isomerase-like TIM barrel DN756_15155 PF00294 pfkB family carbohydrate kinase DN756_15160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_15160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN756_15165 PF02653 Branched-chain amino acid transport system / permease component DN756_15170 PF00005 ABC transporter DN756_15175 PF13407 Periplasmic binding protein domain DN756_15180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN756_15180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN756_15185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_15185 PF00205 Thiamine pyrophosphate enzyme, central domain DN756_15185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_15190 PF00171 Aldehyde dehydrogenase family DN756_15205 PF01835 MG2 domain DN756_15205 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DN756_15205 PF07703 Alpha-2-macroglobulin bait region domain DN756_15205 PF00207 Alpha-2-macroglobulin family DN756_15205 PF17962 Bacterial macroglobulin domain 6 DN756_15205 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DN756_15205 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DN756_15210 PF06832 Penicillin-Binding Protein C-terminus Family DN756_15210 PF00912 Transglycosylase DN756_15210 PF00905 Penicillin binding protein transpeptidase domain DN756_15215 PF13693 Winged helix-turn-helix DNA-binding DN756_15235 PF05638 Type VI secretion system effector, Hcp DN756_15250 PF13018 Extended Signal Peptide of Type V secretion system DN756_15250 PF03797 Autotransporter beta-domain DN756_15250 PF03212 Pertactin DN756_15250 PF16168 Adhesin of bacterial autotransporter system, probable stalk DN756_15265 PF08007 Cupin superfamily protein DN756_15275 PF00872 Transposase, Mutator family DN756_15280 PF01479 S4 domain DN756_15280 PF00849 RNA pseudouridylate synthase DN756_15305 PF00248 Aldo/keto reductase family DN756_15310 PF00248 Aldo/keto reductase family DN756_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_15315 PF03466 LysR substrate binding domain DN756_15330 PF00782 Dual specificity phosphatase, catalytic domain DN756_15335 PF12147 Putative methyltransferase DN756_15335 PF12146 Serine aminopeptidase, S33 DN756_15340 PF01553 Acyltransferase DN756_15350 PF01066 CDP-alcohol phosphatidyltransferase DN756_15365 PF00589 Phage integrase family DN756_15390 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DN756_15475 PF06183 DinI-like family DN756_15480 PF06183 DinI-like family DN756_15485 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DN756_15545 PF17482 Phage tail sheath C-terminal domain DN756_15545 PF04984 Phage tail sheath protein subtilisin-like domain DN756_15580 PF00589 Phage integrase family DN756_15595 PF06755 CbtA_toxin of type IV toxin-antitoxin system DN756_15600 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DN756_15605 PF04002 RadC-like JAB domain DN756_15610 PF06067 Domain of unknown function (DUF932) DN756_15635 PF01926 50S ribosome-binding GTPase DN756_15690 PF14659 Phage integrase, N-terminal SAM-like domain DN756_15690 PF13356 Arm DNA-binding domain DN756_15690 PF00589 Phage integrase family DN756_15695 PF00589 Phage integrase family DN756_15695 PF13356 Arm DNA-binding domain DN756_15695 PF14659 Phage integrase, N-terminal SAM-like domain DN756_15705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN756_15705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN756_15715 PF01406 tRNA synthetases class I (C) catalytic domain DN756_15715 PF09190 DALR domain DN756_15720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN756_15725 PF00149 Calcineurin-like phosphoesterase DN756_15735 PF00731 AIR carboxylase DN756_15740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN756_15740 PF02222 ATP-grasp domain DN756_15750 PF00005 ABC transporter DN756_15755 PF13472 GDSL-like Lipase/Acylhydrolase family DN756_15760 PF00106 short chain dehydrogenase DN756_15765 PF00085 Thioredoxin DN756_15770 PF16200 C-terminal region of band_7 DN756_15770 PF01145 SPFH domain / Band 7 family DN756_15775 PF01957 NfeD-like C-terminal, partner-binding DN756_15780 PF13411 MerR HTH family regulatory protein DN756_15785 PF00403 Heavy-metal-associated domain DN756_15790 PF01963 TraB family DN756_15795 PF04073 Aminoacyl-tRNA editing domain DN756_15805 PF02872 5'-nucleotidase, C-terminal domain DN756_15805 PF00149 Calcineurin-like phosphoesterase DN756_15810 PF02872 5'-nucleotidase, C-terminal domain DN756_15810 PF00149 Calcineurin-like phosphoesterase DN756_15820 PF01797 Transposase IS200 like DN756_15830 PF00999 Sodium/hydrogen exchanger family DN756_15830 PF02254 TrkA-N domain DN756_15835 PF00294 pfkB family carbohydrate kinase DN756_15840 PF02706 Chain length determinant protein DN756_15845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN756_15845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN756_15845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN756_15845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN756_15850 PF01370 NAD dependent epimerase/dehydratase family DN756_15855 PF00535 Glycosyl transferase family 2 DN756_15860 PF01050 Mannose-6-phosphate isomerase DN756_15860 PF00483 Nucleotidyl transferase DN756_15865 PF01370 NAD dependent epimerase/dehydratase family DN756_15870 PF16363 GDP-mannose 4,6 dehydratase DN756_15875 PF00534 Glycosyl transferases group 1 DN756_15875 PF13439 Glycosyltransferase Family 4 DN756_15895 PF01370 NAD dependent epimerase/dehydratase family DN756_15900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN756_15905 PF16363 GDP-mannose 4,6 dehydratase DN756_15910 PF00483 Nucleotidyl transferase DN756_15915 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_15915 PF00970 Oxidoreductase FAD-binding domain DN756_15915 PF00175 Oxidoreductase NAD-binding domain DN756_15920 PF00762 Ferrochelatase DN756_15925 PF05191 Adenylate kinase, active site lid DN756_15930 PF00183 Hsp90 protein DN756_15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_15935 PF02132 RecR protein DN756_15935 PF13662 Toprim domain DN756_15940 PF02575 YbaB/EbfC DNA-binding family DN756_15945 PF12169 DNA polymerase III subunits gamma and tau domain III DN756_15945 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DN756_15945 PF12170 DNA polymerase III tau subunit V interacting with alpha DN756_15950 PF00156 Phosphoribosyl transferase domain DN756_15955 PF04304 Protein of unknown function (DUF454) DN756_15965 PF10689 Protein of unknown function (DUF2496) DN756_15970 PF12794 Mechanosensitive ion channel inner membrane domain 1 DN756_15970 PF12795 Mechanosensitive ion channel porin domain DN756_15970 PF00924 Mechanosensitive ion channel DN756_15975 PF02635 DsrE/DsrF-like family DN756_15980 PF00440 Bacterial regulatory proteins, tetR family DN756_15980 PF08361 MAATS-type transcriptional repressor, C-terminal region DN756_15985 PF00529 HlyD membrane-fusion protein of T1SS DN756_15985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_15990 PF00873 AcrB/AcrD/AcrF family DN756_16000 PF01797 Transposase IS200 like DN756_16005 PF01197 Ribosomal protein L31 DN756_16010 PF00444 Ribosomal protein L36 DN756_16020 PF10757 Biofilm formation regulator YbaJ DN756_16025 PF05321 Haemolysin expression modulating protein DN756_16035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN756_16040 PF09619 Type III secretion system lipoprotein chaperone (YscW) DN756_16050 PF00909 Ammonium Transporter Family DN756_16055 PF00543 Nitrogen regulatory protein P-II DN756_16060 PF00005 ABC transporter DN756_16060 PF00664 ABC transporter transmembrane region DN756_16065 PF00005 ABC transporter DN756_16065 PF00664 ABC transporter transmembrane region DN756_16070 PF13404 AsnC-type helix-turn-helix domain DN756_16070 PF01037 Lrp/AsnC ligand binding domain DN756_16075 PF00291 Pyridoxal-phosphate dependent enzyme DN756_16085 PF12793 Sugar transport-related sRNA regulator N-term DN756_16085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_16090 PF06508 Queuosine biosynthesis protein QueC DN756_16105 PF13145 PPIC-type PPIASE domain DN756_16110 PF00216 Bacterial DNA-binding protein DN756_16115 PF05362 Lon protease (S16) C-terminal proteolytic domain DN756_16115 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN756_16115 PF00004 ATPase family associated with various cellular activities (AAA) DN756_16120 PF07724 AAA domain (Cdc48 subfamily) DN756_16120 PF06689 ClpX C4-type zinc finger DN756_16120 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_16125 PF00574 Clp protease DN756_16130 PF05697 Bacterial trigger factor protein (TF) DN756_16130 PF05698 Bacterial trigger factor protein (TF) C-terminus DN756_16130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN756_16140 PF01722 BolA-like protein DN756_16145 PF03923 Uncharacterized lipoprotein DN756_16145 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DN756_16150 PF07690 Major Facilitator Superfamily DN756_16160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN756_16160 PF06481 COX Aromatic Rich Motif DN756_16165 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN756_16170 PF00510 Cytochrome c oxidase subunit III DN756_16175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN756_16180 PF01040 UbiA prenyltransferase family DN756_16185 PF07690 Major Facilitator Superfamily DN756_16190 PF04461 Protein of unknown function (DUF520) DN756_16200 PF02558 Ketopantoate reductase PanE/ApbA DN756_16200 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN756_16205 PF01965 DJ-1/PfpI family DN756_16210 PF02926 THUMP domain DN756_16210 PF02568 Thiamine biosynthesis protein (ThiI) DN756_16215 PF02609 Exonuclease VII small subunit DN756_16220 PF00348 Polyprenyl synthetase DN756_16225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN756_16225 PF02779 Transketolase, pyrimidine binding domain DN756_16225 PF02780 Transketolase, C-terminal domain DN756_16230 PF04608 Phosphatidylglycerophosphatase A DN756_16235 PF02769 AIR synthase related protein, C-terminal domain DN756_16235 PF00586 AIR synthase related protein, N-terminal domain DN756_16240 PF01029 NusB family DN756_16245 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN756_16250 PF01872 RibD C-terminal domain DN756_16250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN756_16255 PF03477 ATP cone domain DN756_16270 PF02355 Protein export membrane protein DN756_16270 PF07549 SecD/SecF GG Motif DN756_16275 PF13721 SecD export protein N-terminal TM region DN756_16275 PF07549 SecD/SecF GG Motif DN756_16275 PF02355 Protein export membrane protein DN756_16280 PF02699 Preprotein translocase subunit DN756_16285 PF01702 Queuine tRNA-ribosyltransferase DN756_16290 PF02547 Queuosine biosynthesis protein DN756_16295 PF04336 Acyl carrier protein phosphodiesterase DN756_16300 PF10417 C-terminal domain of 1-Cys peroxiredoxin DN756_16300 PF00578 AhpC/TSA family DN756_16315 PF00106 short chain dehydrogenase DN756_16325 PF02903 Alpha amylase, N-terminal ig-like domain DN756_16325 PF00128 Alpha amylase, catalytic domain DN756_16330 PF00324 Amino acid permease DN756_16335 PF05525 Branched-chain amino acid transport protein DN756_16340 PF12849 PBP superfamily domain DN756_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_16345 PF00989 PAS fold DN756_16345 PF11808 Phosphate regulon sensor protein PhoR DN756_16345 PF00512 His Kinase A (phospho-acceptor) domain DN756_16350 PF00072 Response regulator receiver domain DN756_16350 PF00486 Transcriptional regulatory protein, C terminal DN756_16355 PF12320 Type 5 capsule protein repressor C-terminal domain DN756_16355 PF00149 Calcineurin-like phosphoesterase DN756_16360 PF13476 AAA domain DN756_16365 PF00480 ROK family DN756_16370 PF04381 Putative exonuclease, RdgC DN756_16375 PF06865 Pyrimidine/purine nucleoside phosphorylase DN756_16380 PF01202 Shikimate kinase DN756_16395 PF08241 Methyltransferase domain DN756_16405 PF07317 Flagellar regulator YcgR DN756_16405 PF07238 PilZ domain DN756_16410 PF00171 Aldehyde dehydrogenase family DN756_16415 PF01472 PUA domain DN756_16415 PF00696 Amino acid kinase family DN756_16420 PF07417 Sigma factor-binding transcriptional regulator Crl DN756_16430 PF00156 Phosphoribosyl transferase domain DN756_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_16445 PF03466 LysR substrate binding domain DN756_16450 PF01546 Peptidase family M20/M25/M40 DN756_16450 PF07687 Peptidase dimerisation domain DN756_16455 PF11798 IMS family HHH motif DN756_16455 PF00817 impB/mucB/samB family DN756_16455 PF11799 impB/mucB/samB family C-terminal domain DN756_16460 PF03009 Glycerophosphoryl diester phosphodiesterase family DN756_16470 PF02424 ApbE family DN756_16475 PF00970 Oxidoreductase FAD-binding domain DN756_16475 PF00111 2Fe-2S iron-sulfur cluster binding domain DN756_16475 PF00175 Oxidoreductase NAD-binding domain DN756_16480 PF02508 Rnf-Nqr subunit, membrane protein DN756_16485 PF02508 Rnf-Nqr subunit, membrane protein DN756_16490 PF04205 FMN-binding domain DN756_16495 PF03116 NQR2, RnfD, RnfE family DN756_16500 PF11973 NQRA C-terminal domain DN756_16500 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DN756_16510 PF03734 L,D-transpeptidase catalytic domain DN756_16515 PF13230 Glutamine amidotransferases class-II DN756_16520 PF13580 SIS domain DN756_16525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN756_16525 PF09317 Domain of unknown function (DUF1974) DN756_16525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN756_16535 PF18254 HMW1 domain 2 DN756_16535 PF18071 HMW1C N-terminal DN756_16540 PF05860 haemagglutination activity domain DN756_16545 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DN756_16545 PF08479 POTRA domain, ShlB-type DN756_16555 PF01797 Transposase IS200 like DN756_16560 PF01636 Phosphotransferase enzyme family DN756_16565 PF01008 Initiation factor 2 subunit family DN756_16570 PF03079 ARD/ARD' family DN756_16580 PF00596 Class II Aldolase and Adducin N-terminal domain DN756_16585 PF00155 Aminotransferase class I and II DN756_16590 PF00795 Carbon-nitrogen hydrolase DN756_16595 PF07687 Peptidase dimerisation domain DN756_16595 PF01546 Peptidase family M20/M25/M40 DN756_16600 PF00266 Aminotransferase class-V DN756_16605 PF00005 ABC transporter DN756_16615 PF00528 Binding-protein-dependent transport system inner membrane component DN756_16620 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_16640 PF01425 Amidase DN756_16650 PF07690 Major Facilitator Superfamily DN756_16655 PF03591 AzlC protein DN756_16660 PF05437 Branched-chain amino acid transport protein (AzlD) DN756_16665 PF01047 MarR family DN756_16675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_16675 PF00529 HlyD membrane-fusion protein of T1SS DN756_16680 PF07690 Major Facilitator Superfamily DN756_16685 PF00588 SpoU rRNA Methylase family DN756_16685 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN756_16690 PF00085 Thioredoxin DN756_16700 PF00583 Acetyltransferase (GNAT) family DN756_16700 PF13380 CoA binding domain DN756_16700 PF13607 Succinyl-CoA ligase like flavodoxin domain DN756_16705 PF13091 PLD-like domain DN756_16710 PF10043 Predicted periplasmic lipoprotein (DUF2279) DN756_16750 PF17871 AAA lid domain DN756_16750 PF02861 Clp amino terminal domain, pathogenicity island component DN756_16750 PF07724 AAA domain (Cdc48 subfamily) DN756_16750 PF00004 ATPase family associated with various cellular activities (AAA) DN756_16750 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_16760 PF01479 S4 domain DN756_16760 PF00849 RNA pseudouridylate synthase DN756_16770 PF13525 Outer membrane lipoprotein DN756_16775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN756_16780 PF00800 Prephenate dehydratase DN756_16780 PF01817 Chorismate mutase type II DN756_16785 PF02153 Prephenate dehydrogenase DN756_16785 PF01817 Chorismate mutase type II DN756_16790 PF00793 DAHP synthetase I family DN756_16795 PF00072 Response regulator receiver domain DN756_16795 PF04397 LytTr DNA-binding domain DN756_16800 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN756_16805 PF04338 Protein of unknown function, DUF481 DN756_16810 PF01245 Ribosomal protein L19 DN756_16815 PF01746 tRNA (Guanine-1)-methyltransferase DN756_16820 PF01782 RimM N-terminal domain DN756_16820 PF05239 PRC-barrel domain DN756_16825 PF00886 Ribosomal protein S16 DN756_16830 PF00448 SRP54-type protein, GTPase domain DN756_16830 PF02978 Signal peptide binding domain DN756_16830 PF02881 SRP54-type protein, helical bundle domain DN756_16835 PF01578 Cytochrome C assembly protein DN756_16840 PF00571 CBS domain DN756_16840 PF03471 Transporter associated domain DN756_16840 PF01595 Cyclin M transmembrane N-terminal domain DN756_16845 PF02664 S-Ribosylhomocysteinase (LuxS) DN756_16850 PF04262 Glutamate-cysteine ligase DN756_16855 PF09335 SNARE associated Golgi protein DN756_16860 PF13419 Haloacid dehalogenase-like hydrolase DN756_16890 PF02599 Global regulator protein family DN756_16895 PF01411 tRNA synthetases class II (A) DN756_16895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN756_16895 PF02272 DHHA1 domain DN756_16900 PF02631 RecX family DN756_16905 PF00154 recA bacterial DNA recombination protein DN756_16910 PF02464 Competence-damaged protein DN756_16915 PF07690 Major Facilitator Superfamily DN756_16935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_16935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_16940 PF02780 Transketolase, C-terminal domain DN756_16940 PF02779 Transketolase, pyrimidine binding domain DN756_16945 PF00456 Transketolase, thiamine diphosphate binding domain DN756_16950 PF02653 Branched-chain amino acid transport system / permease component DN756_16955 PF00005 ABC transporter DN756_16970 PF00141 Peroxidase DN756_16975 PF07361 Cytochrome b562 DN756_16980 PF01292 Prokaryotic cytochrome b561 DN756_16985 PF02613 Nitrate reductase delta subunit DN756_16990 PF04976 DMSO reductase anchor subunit (DmsC) DN756_16995 PF13247 4Fe-4S dicluster domain DN756_16995 PF12800 4Fe-4S binding domain DN756_17000 PF01568 Molydopterin dinucleotide binding domain DN756_17000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_17000 PF00384 Molybdopterin oxidoreductase DN756_17005 PF00596 Class II Aldolase and Adducin N-terminal domain DN756_17010 PF08220 DeoR-like helix-turn-helix domain DN756_17010 PF00455 DeoR C terminal sensor domain DN756_17020 PF00005 ABC transporter DN756_17025 PF02653 Branched-chain amino acid transport system / permease component DN756_17030 PF02653 Branched-chain amino acid transport system / permease component DN756_17035 PF01261 Xylose isomerase-like TIM barrel DN756_17040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_17040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_17045 PF05683 Fumarase C-terminus DN756_17045 PF05681 Fumarate hydratase (Fumerase) DN756_17055 PF00557 Metallopeptidase family M24 DN756_17065 PF07715 TonB-dependent Receptor Plug Domain DN756_17065 PF00593 TonB dependent receptor DN756_17075 PF00034 Cytochrome c DN756_17075 PF03150 Di-haem cytochrome c peroxidase DN756_17075 PF14376 Haem-binding domain DN756_17080 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_17095 PF01022 Bacterial regulatory protein, arsR family DN756_17100 PF02040 Arsenical pump membrane protein DN756_17105 PF04198 Putative sugar-binding domain DN756_17105 PF13936 Helix-turn-helix domain DN756_17110 PF02734 DAK2 domain DN756_17115 PF02733 Dak1 domain DN756_17125 PF00107 Zinc-binding dehydrogenase DN756_17125 PF08240 Alcohol dehydrogenase GroES-like domain DN756_17130 PF02502 Ribose/Galactose Isomerase DN756_17135 PF05188 MutS domain II DN756_17135 PF01624 MutS domain I DN756_17135 PF05190 MutS family domain IV DN756_17135 PF00488 MutS domain V DN756_17135 PF05192 MutS domain III DN756_17140 PF00140 Sigma-70 factor, region 1.2 DN756_17140 PF04539 Sigma-70 region 3 DN756_17140 PF04545 Sigma-70, region 4 DN756_17140 PF04542 Sigma-70 region 2 DN756_17145 PF01551 Peptidase family M23 DN756_17145 PF01476 LysM domain DN756_17155 PF01975 Survival protein SurE DN756_17160 PF01142 tRNA pseudouridine synthase D (TruD) DN756_17165 PF02542 YgbB family DN756_17170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN756_17175 PF04977 Septum formation initiator DN756_17180 PF12084 Protein of unknown function (DUF3561) DN756_17190 PF00009 Elongation factor Tu GTP binding domain DN756_17195 PF01507 Phosphoadenosine phosphosulfate reductase family DN756_17200 PF14824 Sirohaem biosynthesis protein central DN756_17200 PF10414 Sirohaem synthase dimerisation region DN756_17200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN756_17225 PF01507 Phosphoadenosine phosphosulfate reductase family DN756_17230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN756_17230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN756_17235 PF00667 FAD binding domain DN756_17235 PF00175 Oxidoreductase NAD-binding domain DN756_17235 PF00258 Flavodoxin DN756_17240 PF01242 6-pyruvoyl tetrahydropterin synthase DN756_17245 PF04055 Radical SAM superfamily DN756_17250 PF00080 Copper/zinc superoxide dismutase (SODC) DN756_17255 PF00113 Enolase, C-terminal TIM barrel domain DN756_17255 PF03952 Enolase, N-terminal domain DN756_17260 PF00117 Glutamine amidotransferase class-I DN756_17260 PF06418 CTP synthase N-terminus DN756_17265 PF03819 MazG nucleotide pyrophosphohydrolase domain DN756_17270 PF13291 ACT domain DN756_17270 PF02824 TGS domain DN756_17270 PF04607 Region found in RelA / SpoT proteins DN756_17275 PF01938 TRAM domain DN756_17275 PF05958 tRNA (Uracil-5-)-methyltransferase DN756_17285 PF01627 Hpt domain DN756_17285 PF00672 HAMP domain DN756_17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_17285 PF00512 His Kinase A (phospho-acceptor) domain DN756_17285 PF00072 Response regulator receiver domain DN756_17285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN756_17290 PF00595 PDZ domain DN756_17295 PF13286 Phosphohydrolase-associated domain DN756_17295 PF01966 HD domain DN756_17300 PF01048 Phosphorylase superfamily DN756_17305 PF01497 Periplasmic binding protein DN756_17310 PF03458 UPF0126 domain DN756_17315 PF01521 Iron-sulphur cluster biosynthesis DN756_17320 PF00654 Voltage gated chloride channel DN756_17325 PF00202 Aminotransferase class-III DN756_17330 PF01032 FecCD transport family DN756_17335 PF01497 Periplasmic binding protein DN756_17340 PF00005 ABC transporter DN756_17345 PF00905 Penicillin binding protein transpeptidase domain DN756_17345 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal DN756_17345 PF14814 Bifunctional transglycosylase second domain DN756_17345 PF00912 Transglycosylase DN756_17350 PF00270 DEAD/DEAH box helicase DN756_17350 PF00271 Helicase conserved C-terminal domain DN756_17350 PF04408 Helicase associated domain (HA2) DN756_17350 PF08482 ATP-dependent helicase C-terminal DN756_17355 PF02834 LigT like Phosphoesterase DN756_17360 PF17746 SfsA N-terminal OB domain DN756_17360 PF03749 Sugar fermentation stimulation protein RE domain DN756_17370 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN756_17380 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN756_17385 PF01743 Poly A polymerase head domain DN756_17385 PF12626 Polymerase A arginine-rich C-terminus DN756_17385 PF12627 Probable RNA and SrmB- binding site of polymerase A DN756_17390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN756_17395 PF02548 Ketopantoate hydroxymethyltransferase DN756_17400 PF02569 Pantoate-beta-alanine ligase DN756_17405 PF02261 Aspartate decarboxylase DN756_17410 PF01522 Polysaccharide deacetylase DN756_17415 PF01061 ABC-2 type transporter DN756_17420 PF00005 ABC transporter DN756_17425 PF00484 Carbonic anhydrase DN756_17430 PF00156 Phosphoribosyl transferase domain DN756_17435 PF00394 Multicopper oxidase DN756_17435 PF07732 Multicopper oxidase DN756_17435 PF07731 Multicopper oxidase DN756_17435 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN756_17440 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) DN756_17445 PF17284 Spermidine synthase tetramerisation domain DN756_17450 PF02675 S-adenosylmethionine decarboxylase DN756_17455 PF00892 EamA-like transporter family DN756_17460 PF06062 Uncharacterised protein family (UPF0231) DN756_17465 PF00330 Aconitase family (aconitate hydratase) DN756_17465 PF06434 Aconitate hydratase 2 N-terminus DN756_17465 PF11791 Aconitate B N-terminal domain DN756_17475 PF01797 Transposase IS200 like DN756_17480 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_17480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN756_17485 PF00364 Biotin-requiring enzyme DN756_17485 PF02817 e3 binding domain DN756_17485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN756_17490 PF00456 Transketolase, thiamine diphosphate binding domain DN756_17490 PF17831 Pyruvate dehydrogenase E1 component middle domain DN756_17495 PF07729 FCD domain DN756_17495 PF00392 Bacterial regulatory proteins, gntR family DN756_17505 PF00324 Amino acid permease DN756_17510 PF17113 Regulatory signalling modulator protein AmpE DN756_17515 PF01510 N-acetylmuramoyl-L-alanine amidase DN756_17520 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN756_17520 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN756_17525 PF07963 Prokaryotic N-terminal methylation motif DN756_17530 PF00437 Type II/IV secretion system protein DN756_17530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DN756_17535 PF00482 Type II secretion system (T2SS), protein F DN756_17540 PF00478 IMP dehydrogenase / GMP reductase domain DN756_17550 PF01121 Dephospho-CoA kinase DN756_17555 PF07072 Cell division protein DN756_17560 PF03884 DNA gyrase inhibitor YacG DN756_17565 PF01797 Transposase IS200 like DN756_17575 PF00293 NUDIX domain DN756_17585 PF02810 SEC-C motif DN756_17585 PF07517 SecA DEAD-like domain DN756_17585 PF01043 SecA preprotein cross-linking domain DN756_17585 PF07516 SecA Wing and Scaffold domain DN756_17590 PF06558 Secretion monitor precursor protein (SecM) DN756_17600 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DN756_17605 PF12327 FtsZ family, C-terminal domain DN756_17605 PF00091 Tubulin/FtsZ family, GTPase domain DN756_17610 PF02491 SHS2 domain inserted in FTSA DN756_17615 PF03799 Cell division protein FtsQ DN756_17615 PF08478 POTRA domain, FtsQ-type DN756_17620 PF07478 D-ala D-ala ligase C-terminus DN756_17620 PF01820 D-ala D-ala ligase N-terminus DN756_17625 PF08245 Mur ligase middle domain DN756_17625 PF01225 Mur ligase family, catalytic domain DN756_17625 PF02875 Mur ligase family, glutamate ligase domain DN756_17630 PF04101 Glycosyltransferase family 28 C-terminal domain DN756_17630 PF03033 Glycosyltransferase family 28 N-terminal domain DN756_17635 PF01098 Cell cycle protein DN756_17640 PF02875 Mur ligase family, glutamate ligase domain DN756_17640 PF08245 Mur ligase middle domain DN756_17645 PF00953 Glycosyl transferase family 4 DN756_17645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN756_17650 PF02875 Mur ligase family, glutamate ligase domain DN756_17650 PF01225 Mur ligase family, catalytic domain DN756_17650 PF08245 Mur ligase middle domain DN756_17655 PF02875 Mur ligase family, glutamate ligase domain DN756_17655 PF01225 Mur ligase family, catalytic domain DN756_17655 PF08245 Mur ligase middle domain DN756_17660 PF00905 Penicillin binding protein transpeptidase domain DN756_17660 PF03717 Penicillin-binding Protein dimerisation domain DN756_17665 PF04999 Cell division protein FtsL DN756_17670 PF01795 MraW methylase family DN756_17675 PF02381 MraZ protein, putative antitoxin-like DN756_17685 PF06610 L-alanine exporter DN756_17690 PF00356 Bacterial regulatory proteins, lacI family DN756_17690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN756_17700 PF10369 Small subunit of acetolactate synthase DN756_17705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_17705 PF00205 Thiamine pyrophosphate enzyme, central domain DN756_17705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_17715 PF00501 AMP-binding enzyme DN756_17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_17725 PF03466 LysR substrate binding domain DN756_17735 PF00682 HMGL-like DN756_17735 PF08502 LeuA allosteric (dimerisation) domain DN756_17740 PF00180 Isocitrate/isopropylmalate dehydrogenase DN756_17745 PF00330 Aconitase family (aconitate hydratase) DN756_17750 PF00694 Aconitase C-terminal domain DN756_17755 PF07690 Major Facilitator Superfamily DN756_17760 PF12793 Sugar transport-related sRNA regulator N-term DN756_17760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN756_17775 PF00528 Binding-protein-dependent transport system inner membrane component DN756_17780 PF00005 ABC transporter DN756_17785 PF09335 SNARE associated Golgi protein DN756_17790 PF00136 DNA polymerase family B DN756_17790 PF03104 DNA polymerase family B, exonuclease domain DN756_17795 PF12137 RNA polymerase recycling family C-terminal DN756_17795 PF18339 RapA N-terminal Tudor like domain 1 DN756_17795 PF00176 SNF2 family N-terminal domain DN756_17795 PF18337 RapA N-terminal Tudor like domain DN756_17795 PF00271 Helicase conserved C-terminal domain DN756_17810 PF05736 OprF membrane domain DN756_17810 PF00691 OmpA family DN756_17845 PF04717 Type VI secretion system, phage-baseplate injector DN756_17850 PF00004 ATPase family associated with various cellular activities (AAA) DN756_17850 PF17871 AAA lid domain DN756_17850 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_17850 PF07724 AAA domain (Cdc48 subfamily) DN756_17895 PF00849 RNA pseudouridylate synthase DN756_17900 PF00226 DnaJ domain DN756_17900 PF05099 Tellurite resistance protein TerB DN756_17905 PF04453 LPS transport system D DN756_17905 PF03968 OstA-like protein DN756_17910 PF00639 PPIC-type PPIASE domain DN756_17910 PF09312 SurA N-terminal domain DN756_17915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DN756_17920 PF00398 Ribosomal RNA adenine dimethylase DN756_17925 PF04379 ApaG domain DN756_17930 PF00149 Calcineurin-like phosphoesterase DN756_17950 PF00186 Dihydrofolate reductase DN756_17955 PF12821 Threonine/Serine exporter, ThrE DN756_17960 PF06738 Putative threonine/serine exporter DN756_17965 PF01810 LysE type translocator DN756_17970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN756_17970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN756_17970 PF02142 MGS-like domain DN756_17975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN756_17975 PF00117 Glutamine amidotransferase class-I DN756_17980 PF01113 Dihydrodipicolinate reductase, N-terminus DN756_17980 PF05173 Dihydrodipicolinate reductase, C-terminus DN756_17990 PF02401 LytB protein DN756_17995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN756_18000 PF01252 Signal peptidase (SPase) II DN756_18005 PF06827 Zinc finger found in FPG and IleRS DN756_18005 PF00133 tRNA synthetases class I (I, L, M and V) DN756_18005 PF08264 Anticodon-binding domain of tRNA DN756_18010 PF06574 FAD synthetase DN756_18010 PF01687 Riboflavin kinase DN756_18025 PF01649 Ribosomal protein S20 DN756_18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_18030 PF03466 LysR substrate binding domain DN756_18035 PF06965 Na+/H+ antiporter 1 DN756_18040 PF00684 DnaJ central domain DN756_18040 PF01556 DnaJ C terminal domain DN756_18040 PF00226 DnaJ domain DN756_18045 PF00012 Hsp70 protein DN756_18050 PF01184 GPR1/FUN34/yaaH family DN756_18060 PF07690 Major Facilitator Superfamily DN756_18065 PF00994 Probable molybdopterin binding domain DN756_18070 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN756_18080 PF03883 Peroxide stress protein YaaA DN756_18085 PF00291 Pyridoxal-phosphate dependent enzyme DN756_18085 PF14821 Threonine synthase N terminus DN756_18090 PF00288 GHMP kinases N terminal domain DN756_18090 PF08544 GHMP kinases C terminal DN756_18095 PF00696 Amino acid kinase family DN756_18095 PF00742 Homoserine dehydrogenase DN756_18095 PF01842 ACT domain DN756_18095 PF13840 ACT domain DN756_18095 PF03447 Homoserine dehydrogenase, NAD binding domain DN756_18100 PF08254 Threonine leader peptide DN756_18105 PF00486 Transcriptional regulatory protein, C terminal DN756_18105 PF00072 Response regulator receiver domain DN756_18110 PF05981 CreA protein DN756_18120 PF12833 Helix-turn-helix domain DN756_18120 PF06445 GyrI-like small molecule binding domain DN756_18125 PF00300 Histidine phosphatase superfamily (branch 1) DN756_18130 PF01931 Protein of unknown function DUF84 DN756_18135 PF01371 Trp repressor protein DN756_18140 PF01464 Transglycosylase SLT domain DN756_18140 PF14718 Soluble lytic murein transglycosylase L domain DN756_18145 PF00690 Cation transporter/ATPase, N-terminus DN756_18145 PF00689 Cation transporting ATPase, C-terminus DN756_18155 PF00990 Diguanylate cyclase, GGDEF domain DN756_18155 PF17152 Periplasmic sensor domain DN756_18160 PF00691 OmpA family DN756_18165 PF12848 ABC transporter DN756_18165 PF00005 ABC transporter DN756_18175 PF13521 AAA domain DN756_18175 PF01381 Helix-turn-helix DN756_18180 PF18073 Rubredoxin metal binding domain DN756_18185 PF18429 Domain of unknown function (DUF5609) DN756_18190 PF10144 Bacterial virulence factor haemolysin DN756_18195 PF01048 Phosphorylase superfamily DN756_18200 PF01676 Metalloenzyme superfamily DN756_18205 PF02885 Glycosyl transferase family, helical bundle domain DN756_18205 PF00591 Glycosyl transferase family, a/b domain DN756_18205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN756_18210 PF01791 DeoC/LacD family aldolase DN756_18215 PF07670 Nucleoside recognition DN756_18215 PF01773 Na+ dependent nucleoside transporter N-terminus DN756_18215 PF07662 Na+ dependent nucleoside transporter C-terminus DN756_18220 PF01026 TatD related DNase DN756_18225 PF01734 Patatin-like phospholipase DN756_18230 PF07043 Protein of unknown function (DUF1328) DN756_18235 PF04972 BON domain DN756_18240 PF16658 Class II release factor RF3, C-terminal domain DN756_18240 PF00009 Elongation factor Tu GTP binding domain DN756_18240 PF03144 Elongation factor Tu domain 2 DN756_18245 PF00583 Acetyltransferase (GNAT) family DN756_18250 PF03603 DNA polymerase III psi subunit DN756_18255 PF08468 Methyltransferase small domain N-terminal DN756_18255 PF05175 Methyltransferase small domain DN756_18275 PF07256 Protein of unknown function (DUF1435) DN756_18280 PF00990 Diguanylate cyclase, GGDEF domain DN756_18285 PF01095 Pectinesterase DN756_18305 PF00873 AcrB/AcrD/AcrF family DN756_18310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_18330 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DN756_18335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_18335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_18340 PF04198 Putative sugar-binding domain DN756_18340 PF00325 Bacterial regulatory proteins, crp family DN756_18350 PF00005 ABC transporter DN756_18355 PF02653 Branched-chain amino acid transport system / permease component DN756_18360 PF02653 Branched-chain amino acid transport system / permease component DN756_18365 PF13407 Periplasmic binding protein domain DN756_18370 PF01791 DeoC/LacD family aldolase DN756_18375 PF03992 Antibiotic biosynthesis monooxygenase DN756_18380 PF10696 Protein of unknown function (DUF2501) DN756_18385 PF02896 PEP-utilising enzyme, TIM barrel domain DN756_18385 PF00381 PTS HPr component phosphorylation site DN756_18385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN756_18385 PF00391 PEP-utilising enzyme, mobile domain DN756_18385 PF05524 PEP-utilising enzyme, N-terminal DN756_18395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN756_18400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN756_18405 PF12833 Helix-turn-helix domain DN756_18415 PF05987 Bacterial protein of unknown function (DUF898) DN756_18460 PF02384 N-6 DNA Methylase DN756_18460 PF12161 HsdM N-terminal domain DN756_18470 PF18766 SWI2/SNF2 ATPase DN756_18470 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DN756_18470 PF12008 Type I restriction and modification enzyme - subunit R C terminal DN756_18480 PF13356 Arm DNA-binding domain DN756_18480 PF00589 Phage integrase family DN756_18490 PF03739 Lipopolysaccharide export system permease LptF/LptG DN756_18495 PF03739 Lipopolysaccharide export system permease LptF/LptG DN756_18500 PF00883 Cytosol aminopeptidase family, catalytic domain DN756_18500 PF02789 Cytosol aminopeptidase family, N-terminal domain DN756_18505 PF04364 DNA polymerase III chi subunit, HolC DN756_18510 PF10458 Valyl tRNA synthetase tRNA binding arm DN756_18510 PF00133 tRNA synthetases class I (I, L, M and V) DN756_18510 PF08264 Anticodon-binding domain of tRNA DN756_18515 PF00583 Acetyltransferase (GNAT) family DN756_18520 PF06877 Regulator of ribonuclease activity B DN756_18525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN756_18525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN756_18530 PF04074 YhcH/YjgK/YiaL DN756_18540 PF00528 Binding-protein-dependent transport system inner membrane component DN756_18545 PF00528 Binding-protein-dependent transport system inner membrane component DN756_18545 PF12911 N-terminal TM domain of oligopeptide transport permease C DN756_18550 PF00005 ABC transporter DN756_18550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_18555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN756_18555 PF00005 ABC transporter DN756_18560 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN756_18560 PF03477 ATP cone domain DN756_18575 PF07702 UTRA domain DN756_18575 PF00392 Bacterial regulatory proteins, gntR family DN756_18580 PF06754 Phosphonate metabolism protein PhnG DN756_18585 PF05845 Bacterial phosphonate metabolism protein (PhnH) DN756_18590 PF05861 Bacterial phosphonate metabolism protein (PhnI) DN756_18595 PF06007 Phosphonate metabolism protein PhnJ DN756_18600 PF00005 ABC transporter DN756_18605 PF00005 ABC transporter DN756_18610 PF07969 Amidohydrolase family DN756_18620 PF12706 Beta-lactamase superfamily domain DN756_18625 PF13460 NAD(P)H-binding DN756_18640 PF03459 TOBE domain DN756_18640 PF17912 MalK OB fold domain DN756_18640 PF00005 ABC transporter DN756_18645 PF00528 Binding-protein-dependent transport system inner membrane component DN756_18655 PF13416 Bacterial extracellular solute-binding protein DN756_18670 PF01541 GIY-YIG catalytic domain DN756_18675 PF13508 Acetyltransferase (GNAT) domain DN756_18700 PF02321 Outer membrane efflux protein DN756_18700 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DN756_18705 PF00873 AcrB/AcrD/AcrF family DN756_18710 PF00529 HlyD membrane-fusion protein of T1SS DN756_18710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_18715 PF00296 Luciferase-like monooxygenase DN756_18720 PF01381 Helix-turn-helix DN756_18735 PF03880 DbpA RNA binding domain DN756_18735 PF00270 DEAD/DEAH box helicase DN756_18735 PF12343 Cold shock protein DEAD box A DN756_18735 PF00271 Helicase conserved C-terminal domain DN756_18745 PF13181 Tetratricopeptide repeat DN756_18745 PF07719 Tetratricopeptide repeat DN756_18750 PF03725 3' exoribonuclease family, domain 2 DN756_18750 PF00575 S1 RNA binding domain DN756_18750 PF01138 3' exoribonuclease family, domain 1 DN756_18750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN756_18750 PF00013 KH domain DN756_18755 PF00312 Ribosomal protein S15 DN756_18760 PF09157 Pseudouridine synthase II TruB, C-terminal DN756_18760 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN756_18760 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN756_18765 PF02033 Ribosome-binding factor A DN756_18770 PF04760 Translation initiation factor IF-2, N-terminal region DN756_18770 PF08364 Bacterial translation initiation factor IF-2 associated region DN756_18770 PF11987 Translation-initiation factor 2 DN756_18770 PF03144 Elongation factor Tu domain 2 DN756_18770 PF00009 Elongation factor Tu GTP binding domain DN756_18775 PF00575 S1 RNA binding domain DN756_18775 PF13184 NusA-like KH domain DN756_18775 PF08529 NusA N-terminal domain DN756_18780 PF17384 RimP C-terminal SH3 domain DN756_18780 PF02576 RimP N-terminal domain DN756_18795 PF03840 Preprotein translocase SecG subunit DN756_18800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN756_18800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN756_18800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN756_18800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN756_18805 PF00809 Pterin binding enzyme DN756_18810 PF01434 Peptidase family M41 DN756_18810 PF06480 FtsH Extracellular DN756_18810 PF17862 AAA+ lid domain DN756_18810 PF00004 ATPase family associated with various cellular activities (AAA) DN756_18815 PF01728 FtsJ-like methyltransferase DN756_18820 PF01985 CRS1 / YhbY (CRM) domain DN756_18825 PF03449 Transcription elongation factor, N-terminal DN756_18825 PF01272 Transcription elongation factor, GreA/GreB, C-term DN756_18830 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DN756_18835 PF00072 Response regulator receiver domain DN756_18835 PF00486 Transcriptional regulatory protein, C terminal DN756_18840 PF00672 HAMP domain DN756_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_18840 PF00512 His Kinase A (phospho-acceptor) domain DN756_18845 PF01018 GTP1/OBG DN756_18845 PF01926 50S ribosome-binding GTPase DN756_18900 PF00892 EamA-like transporter family DN756_18905 PF01016 Ribosomal L27 protein DN756_18910 PF00829 Ribosomal prokaryotic L21 protein DN756_18915 PF00348 Polyprenyl synthetase DN756_18925 PF13693 Winged helix-turn-helix DNA-binding DN756_18935 PF00056 lactate/malate dehydrogenase, NAD binding domain DN756_18935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN756_18940 PF01316 Arginine repressor, DNA binding domain DN756_18940 PF02863 Arginine repressor, C-terminal domain DN756_18950 PF02875 Mur ligase family, glutamate ligase domain DN756_18950 PF01225 Mur ligase family, catalytic domain DN756_18950 PF08245 Mur ligase middle domain DN756_18955 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DN756_18960 PF00719 Inorganic pyrophosphatase DN756_18965 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DN756_18970 PF04357 TamB, inner membrane protein subunit of TAM complex DN756_18975 PF07244 Surface antigen variable number repeat DN756_18975 PF01103 Surface antigen DN756_18975 PF17243 POTRA domain TamA domain 1 DN756_18980 PF01625 Peptide methionine sulfoxide reductase DN756_18985 PF03471 Transporter associated domain DN756_18985 PF00571 CBS domain DN756_18985 PF01595 Cyclin M transmembrane N-terminal domain DN756_18990 PF06526 Protein of unknown function (DUF1107) DN756_18995 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DN756_19000 PF00459 Inositol monophosphatase family DN756_19005 PF00149 Calcineurin-like phosphoesterase DN756_19005 PF02872 5'-nucleotidase, C-terminal domain DN756_19010 PF04405 Domain of Unknown function (DUF542) DN756_19010 PF01814 Hemerythrin HHE cation binding domain DN756_19015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN756_19015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DN756_19020 PF08525 Opacity-associated protein A N-terminal motif DN756_19020 PF04225 Opacity-associated protein A LysM-like domain DN756_19030 PF03948 Ribosomal protein L9, C-terminal domain DN756_19030 PF01281 Ribosomal protein L9, N-terminal domain DN756_19035 PF01084 Ribosomal protein S18 DN756_19040 PF00436 Single-strand binding protein family DN756_19045 PF01250 Ribosomal protein S6 DN756_19055 PF00326 Prolyl oligopeptidase family DN756_19060 PF07338 Protein of unknown function (DUF1471) DN756_19065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN756_19065 PF18158 Adaptive response protein AidB N-terminal domain DN756_19065 PF02770 Acyl-CoA dehydrogenase, middle domain DN756_19070 PF00588 SpoU rRNA Methylase family DN756_19070 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN756_19075 PF00575 S1 RNA binding domain DN756_19075 PF08461 Ribonuclease R winged-helix domain DN756_19075 PF17876 Cold shock domain DN756_19075 PF08206 Ribonuclease B OB domain DN756_19075 PF00773 RNB domain DN756_19080 PF02082 Transcriptional regulator DN756_19085 PF00709 Adenylosuccinate synthetase DN756_19090 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DN756_19095 PF01145 SPFH domain / Band 7 family DN756_19100 PF12221 Bacterial membrane protein N terminal DN756_19100 PF01145 SPFH domain / Band 7 family DN756_19105 PF01926 50S ribosome-binding GTPase DN756_19105 PF13167 GTP-binding GTPase N-terminal DN756_19105 PF16360 GTP-binding GTPase Middle Region DN756_19110 PF17209 Hfq protein DN756_19120 PF01119 DNA mismatch repair protein, C-terminal domain DN756_19120 PF08676 MutL C terminal dimerisation domain DN756_19125 PF01520 N-acetylmuramoyl-L-alanine amidase DN756_19130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN756_19135 PF01256 Carbohydrate kinase DN756_19135 PF03853 YjeF-related protein N-terminus DN756_19140 PF08331 Domain of unknown function (DUF1730) DN756_19165 PF00929 Exonuclease DN756_19175 PF03193 RsgA GTPase DN756_19180 PF02666 Phosphatidylserine decarboxylase DN756_19185 PF00924 Mechanosensitive ion channel DN756_19185 PF12794 Mechanosensitive ion channel inner membrane domain 1 DN756_19185 PF12795 Mechanosensitive ion channel porin domain DN756_19190 PF00152 tRNA synthetases class II (D, K and N) DN756_19200 PF00890 FAD binding domain DN756_19200 PF02910 Fumarate reductase flavoprotein C-term DN756_19205 PF13183 4Fe-4S dicluster domain DN756_19205 PF13085 2Fe-2S iron-sulfur cluster binding domain DN756_19210 PF02300 Fumarate reductase subunit C DN756_19215 PF02313 Fumarate reductase subunit D DN756_19220 PF00893 Small Multidrug Resistance protein DN756_19225 PF01132 Elongation factor P (EF-P) OB domain DN756_19225 PF08207 Elongation factor P (EF-P) KOW-like domain DN756_19225 PF09285 Elongation factor P, C-terminal DN756_19230 PF04055 Radical SAM superfamily DN756_19235 PF13698 Domain of unknown function (DUF4156) DN756_19250 PF00118 TCP-1/cpn60 chaperonin family DN756_19255 PF00166 Chaperonin 10 Kd subunit DN756_19260 PF04186 FxsA cytoplasmic membrane protein DN756_19265 PF10415 Fumarase C C-terminus DN756_19265 PF00206 Lyase DN756_19270 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN756_19275 PF03091 CutA1 divalent ion tolerance protein DN756_19280 PF11412 Disulphide bond corrector protein DsbC DN756_19280 PF02683 Cytochrome C biogenesis protein transmembrane region DN756_19285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN756_19285 PF01568 Molydopterin dinucleotide binding domain DN756_19285 PF00384 Molybdopterin oxidoreductase DN756_19290 PF12800 4Fe-4S binding domain DN756_19290 PF13247 4Fe-4S dicluster domain DN756_19295 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_19295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN756_19295 PF13247 4Fe-4S dicluster domain DN756_19340 PF06379 L-rhamnose-proton symport protein (RhaT) DN756_19345 PF02311 AraC-like ligand binding domain DN756_19345 PF12833 Helix-turn-helix domain DN756_19350 PF12833 Helix-turn-helix domain DN756_19350 PF02311 AraC-like ligand binding domain DN756_19360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_19360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_19365 PF06134 L-rhamnose isomerase (RhaA) DN756_19370 PF00596 Class II Aldolase and Adducin N-terminal domain DN756_19375 PF00465 Iron-containing alcohol dehydrogenase DN756_19380 PF05336 L-rhamnose mutarotase DN756_19385 PF00436 Single-strand binding protein family DN756_19395 PF17760 UvrA interaction domain DN756_19395 PF17755 UvrA DNA-binding domain DN756_19395 PF00005 ABC transporter DN756_19400 PF04237 YjbR DN756_19405 PF00155 Aminotransferase class I and II DN756_19410 PF00842 Alanine racemase, C-terminal domain DN756_19410 PF01168 Alanine racemase, N-terminal domain DN756_19415 PF03796 DnaB-like helicase C terminal domain DN756_19415 PF00772 DnaB-like helicase N terminal domain DN756_19420 PF00107 Zinc-binding dehydrogenase DN756_19420 PF08240 Alcohol dehydrogenase GroES-like domain DN756_19425 PF09583 Phage shock protein G (Phageshock_PspG) DN756_19430 PF01207 Dihydrouridine synthase (Dus) DN756_19435 PF01475 Ferric uptake regulator family DN756_19440 PF01726 LexA DNA binding domain DN756_19440 PF00717 Peptidase S24-like DN756_19445 PF01219 Prokaryotic diacylglycerol kinase DN756_19450 PF01553 Acyltransferase DN756_19455 PF01040 UbiA prenyltransferase family DN756_19460 PF04345 Chorismate lyase DN756_19465 PF12951 Passenger-associated-transport-repeat DN756_19470 PF08031 Berberine and berberine like DN756_19470 PF01565 FAD binding domain DN756_19500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_19505 PF13953 PapC C-terminal domain DN756_19505 PF13954 PapC N-terminal domain DN756_19505 PF00577 Outer membrane usher protein DN756_19515 PF02342 TerD domain DN756_19520 PF02342 TerD domain DN756_19525 PF03741 Integral membrane protein TerC family DN756_19530 PF05099 Tellurite resistance protein TerB DN756_19535 PF02342 TerD domain DN756_19540 PF02342 TerD domain DN756_19560 PF15608 PELOTA RNA binding domain DN756_19560 PF11202 Phosphoribosyl transferase (PRTase) DN756_19580 PF04055 Radical SAM superfamily DN756_19585 PF06228 Haem utilisation ChuX/HutX DN756_19590 PF13460 NAD(P)H-binding DN756_19595 PF10636 Hemin uptake protein hemP DN756_19600 PF07715 TonB-dependent Receptor Plug Domain DN756_19600 PF00593 TonB dependent receptor DN756_19605 PF05171 Haemin-degrading HemS.ChuX domain DN756_19610 PF01497 Periplasmic binding protein DN756_19615 PF01032 FecCD transport family DN756_19620 PF00005 ABC transporter DN756_19625 PF01053 Cys/Met metabolism PLP-dependent enzyme DN756_19630 PF03222 Tryptophan/tyrosine permease family DN756_19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_19635 PF03466 LysR substrate binding domain DN756_19640 PF01206 Sulfurtransferase TusA DN756_19645 PF04143 Sulphur transport DN756_19650 PF01312 FlhB HrpN YscU SpaS Family DN756_19655 PF01311 Bacterial export proteins, family 1 DN756_19660 PF01313 Bacterial export proteins, family 3 DN756_19665 PF00813 FliP family DN756_19685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_19685 PF18269 T3SS EscN ATPase C-terminal domain DN756_19690 PF00771 FHIPEP family DN756_19710 PF01514 Secretory protein of YscJ/FliF family DN756_19730 PF12833 Helix-turn-helix domain DN756_19730 PF14525 AraC-binding-like domain DN756_19750 PF01627 Hpt domain DN756_19750 PF00672 HAMP domain DN756_19750 PF00072 Response regulator receiver domain DN756_19750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_19750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN756_19750 PF00512 His Kinase A (phospho-acceptor) domain DN756_19755 PF00072 Response regulator receiver domain DN756_19755 PF00196 Bacterial regulatory proteins, luxR family DN756_19760 PF00375 Sodium:dicarboxylate symporter family DN756_19765 PF00501 AMP-binding enzyme DN756_19765 PF16177 Acetyl-coenzyme A synthetase N-terminus DN756_19765 PF13193 AMP-binding enzyme C-terminal domain DN756_19770 PF04341 Protein of unknown function, DUF485 DN756_19775 PF00474 Sodium:solute symporter family DN756_19825 PF12724 Flavodoxin domain DN756_19830 PF02386 Cation transport protein DN756_19835 PF09186 Domain of unknown function (DUF1949) DN756_19835 PF01205 Uncharacterized protein family UPF0029 DN756_19840 PF00557 Metallopeptidase family M24 DN756_19845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN756_19845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN756_19845 PF00378 Enoyl-CoA hydratase/isomerase DN756_19850 PF00108 Thiolase, N-terminal domain DN756_19850 PF02803 Thiolase, C-terminal domain DN756_19855 PF00970 Oxidoreductase FAD-binding domain DN756_19855 PF00175 Oxidoreductase NAD-binding domain DN756_19860 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DN756_19865 PF02357 Transcription termination factor nusG DN756_19870 PF00490 Delta-aminolevulinic acid dehydratase DN756_19875 PF01026 TatD related DNase DN756_19880 PF00902 Sec-independent protein translocase protein (TatC) DN756_19890 PF02416 mttA/Hcf106 family DN756_19895 PF03109 ABC1 family DN756_19900 PF02036 SCP-2 sterol transfer family DN756_19905 PF01209 ubiE/COQ5 methyltransferase family DN756_19910 PF02646 RmuC family DN756_19915 PF09335 SNARE associated Golgi protein DN756_19920 PF02554 Carbon starvation protein CstA DN756_19920 PF13722 5TM C-terminal transporter carbon starvation CstA DN756_19930 PF01048 Phosphorylase superfamily DN756_19935 PF01738 Dienelactone hydrolase family DN756_19940 PF01717 Cobalamin-independent synthase, Catalytic domain DN756_19940 PF08267 Cobalamin-independent synthase, N-terminal domain DN756_19945 PF03466 LysR substrate binding domain DN756_19945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_19950 PF00892 EamA-like transporter family DN756_19965 PF03547 Membrane transport protein DN756_19970 PF03009 Glycerophosphoryl diester phosphodiesterase family DN756_19975 PF00005 ABC transporter DN756_19975 PF17912 MalK OB fold domain DN756_19980 PF00528 Binding-protein-dependent transport system inner membrane component DN756_19985 PF00528 Binding-protein-dependent transport system inner membrane component DN756_19990 PF13416 Bacterial extracellular solute-binding protein DN756_20035 PF00005 ABC transporter DN756_20040 PF00005 ABC transporter DN756_20040 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN756_20045 PF02653 Branched-chain amino acid transport system / permease component DN756_20045 PF11862 Domain of unknown function (DUF3382) DN756_20050 PF02653 Branched-chain amino acid transport system / permease component DN756_20055 PF13458 Periplasmic binding protein DN756_20060 PF12568 Acetyltransferase (GNAT) domain, PanZ DN756_20065 PF04545 Sigma-70, region 4 DN756_20065 PF04542 Sigma-70 region 2 DN756_20065 PF00140 Sigma-70 factor, region 1.2 DN756_20070 PF18075 FtsX extracellular domain DN756_20070 PF02687 FtsX-like permease family DN756_20075 PF00005 ABC transporter DN756_20080 PF02881 SRP54-type protein, helical bundle domain DN756_20080 PF00448 SRP54-type protein, GTPase domain DN756_20080 PF00448 SRP54-type protein, GTPase domain DN756_20080 PF02881 SRP54-type protein, helical bundle domain DN756_20095 PF06611 Protein of unknown function (DUF1145) DN756_20110 PF07947 YhhN family DN756_20115 PF00403 Heavy-metal-associated domain DN756_20120 PF01206 Sulfurtransferase TusA DN756_20125 PF02592 Putative vitamin uptake transporter DN756_20130 PF08786 DcrB DN756_20135 PF02754 Cysteine-rich domain DN756_20135 PF13183 4Fe-4S dicluster domain DN756_20140 PF00890 FAD binding domain DN756_20145 PF01266 FAD dependent oxidoreductase DN756_20145 PF04324 BFD-like [2Fe-2S] binding domain DN756_20160 PF03009 Glycerophosphoryl diester phosphodiesterase family DN756_20175 PF12146 Serine aminopeptidase, S33 DN756_20180 PF01810 LysE type translocator DN756_20185 PF01810 LysE type translocator DN756_20190 PF00270 DEAD/DEAH box helicase DN756_20190 PF00570 HRDC domain DN756_20190 PF16124 RecQ zinc-binding DN756_20190 PF09382 RQC domain DN756_20190 PF00271 Helicase conserved C-terminal domain DN756_20195 PF02253 Phospholipase A1 DN756_20200 PF03061 Thioesterase superfamily DN756_20205 PF00892 EamA-like transporter family DN756_20210 PF01544 CorA-like Mg2+ transporter protein DN756_20215 PF09370 Phosphoenolpyruvate hydrolase-like DN756_20230 PF00580 UvrD/REP helicase N-terminal domain DN756_20230 PF13361 UvrD-like helicase C-terminal domain DN756_20235 PF13419 Haloacid dehalogenase-like hydrolase DN756_20240 PF00589 Phage integrase family DN756_20240 PF02899 Phage integrase, N-terminal SAM-like domain DN756_20245 PF04340 Protein of unknown function, DUF484 DN756_20250 PF01678 Diaminopimelate epimerase DN756_20255 PF13627 Prokaryotic lipoprotein-attachment site DN756_20260 PF01491 Frataxin-like domain DN756_20265 PF12633 Adenylate cyclase NT domain DN756_20265 PF01295 Adenylate cyclase, class-I DN756_20275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN756_20275 PF03900 Porphobilinogen deaminase, C-terminal domain DN756_20280 PF02602 Uroporphyrinogen-III synthase HemD DN756_20285 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DN756_20290 PF07219 HemY protein N-terminus DN756_20290 PF07719 Tetratricopeptide repeat DN756_20320 PF00324 Amino acid permease DN756_20325 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN756_20330 PF06899 WzyE protein, O-antigen assembly polymerase DN756_20335 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DN756_20340 PF01943 Polysaccharide biosynthesis protein DN756_20345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN756_20355 PF00483 Nucleotidyl transferase DN756_20360 PF16363 GDP-mannose 4,6 dehydratase DN756_20365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN756_20365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN756_20365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN756_20370 PF02350 UDP-N-acetylglucosamine 2-epimerase DN756_20375 PF02706 Chain length determinant protein DN756_20380 PF00953 Glycosyl transferase family 4 DN756_20385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_20385 PF07497 Rho termination factor, RNA-binding domain DN756_20385 PF07498 Rho termination factor, N-terminal domain DN756_20390 PF00085 Thioredoxin DN756_20395 PF00271 Helicase conserved C-terminal domain DN756_20395 PF00270 DEAD/DEAH box helicase DN756_20400 PF02541 Ppx/GppA phosphatase family DN756_20405 PF13361 UvrD-like helicase C-terminal domain DN756_20405 PF00580 UvrD/REP helicase N-terminal domain DN756_20435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_20435 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_20440 PF00577 Outer membrane usher protein DN756_20440 PF13953 PapC C-terminal domain DN756_20440 PF13954 PapC N-terminal domain DN756_20450 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DN756_20450 PF02753 Pili assembly chaperone PapD, C-terminal domain DN756_20455 PF01320 Colicin immunity protein / pyocin immunity protein DN756_20485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN756_20485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN756_20490 PF03466 LysR substrate binding domain DN756_20490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_20510 PF00291 Pyridoxal-phosphate dependent enzyme DN756_20510 PF00585 C-terminal regulatory domain of Threonine dehydratase DN756_20515 PF00920 Dehydratase family DN756_20520 PF01063 Amino-transferase class IV DN756_20530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN756_20530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN756_20530 PF00205 Thiamine pyrophosphate enzyme, central domain DN756_20535 PF08046 IlvGEDA operon leader peptide DN756_20545 PF01078 Magnesium chelatase, subunit ChlI DN756_20545 PF13335 Magnesium chelatase, subunit ChlI C-terminal DN756_20550 PF04219 Protein of unknown function, DUF DN756_20555 PF03466 LysR substrate binding domain DN756_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_20560 PF02653 Branched-chain amino acid transport system / permease component DN756_20565 PF02653 Branched-chain amino acid transport system / permease component DN756_20570 PF00005 ABC transporter DN756_20575 PF13407 Periplasmic binding protein domain DN756_20620 PF01177 Asp/Glu/Hydantoin racemase DN756_20625 PF00593 TonB dependent receptor DN756_20625 PF07715 TonB-dependent Receptor Plug Domain DN756_20630 PF05958 tRNA (Uracil-5-)-methyltransferase DN756_20635 PF07226 Protein of unknown function (DUF1422) DN756_20640 PF00440 Bacterial regulatory proteins, tetR family DN756_20645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_20645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN756_20650 PF03466 LysR substrate binding domain DN756_20650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_20655 PF00462 Glutaredoxin DN756_20655 PF08534 Redoxin DN756_20660 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN756_20660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN756_20665 PF03544 Gram-negative bacterial TonB protein C-terminal DN756_20670 PF00529 HlyD membrane-fusion protein of T1SS DN756_20675 PF00005 ABC transporter DN756_20675 PF00664 ABC transporter transmembrane region DN756_20685 PF07715 TonB-dependent Receptor Plug Domain DN756_20685 PF00593 TonB dependent receptor DN756_20690 PF14698 Argininosuccinate lyase C-terminal DN756_20690 PF00206 Lyase DN756_20695 PF00696 Amino acid kinase family DN756_20700 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN756_20700 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN756_20705 PF07687 Peptidase dimerisation domain DN756_20705 PF01546 Peptidase family M20/M25/M40 DN756_20710 PF00311 Phosphoenolpyruvate carboxylase DN756_20725 PF02219 Methylenetetrahydrofolate reductase DN756_20730 PF00696 Amino acid kinase family DN756_20730 PF00742 Homoserine dehydrogenase DN756_20730 PF03447 Homoserine dehydrogenase, NAD binding domain DN756_20735 PF01053 Cys/Met metabolism PLP-dependent enzyme DN756_20740 PF01340 Met Apo-repressor, MetJ DN756_20745 PF05360 yiaA/B two helix domain DN756_20750 PF01197 Ribosomal protein L31 DN756_20755 PF00271 Helicase conserved C-terminal domain DN756_20755 PF17764 3′ DNA-binding domain (3′BD) DN756_20755 PF18074 Primosomal protein N C-terminal domain DN756_20755 PF00270 DEAD/DEAH box helicase DN756_20755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN756_20765 PF00356 Bacterial regulatory proteins, lacI family DN756_20770 PF05036 Sporulation related domain DN756_20775 PF00227 Proteasome subunit DN756_20780 PF00004 ATPase family associated with various cellular activities (AAA) DN756_20780 PF10431 C-terminal, D2-small domain, of ClpB protein DN756_20780 PF07724 AAA domain (Cdc48 subfamily) DN756_20785 PF01040 UbiA prenyltransferase family DN756_20790 PF03737 Aldolase/RraA DN756_20810 PF00529 HlyD membrane-fusion protein of T1SS DN756_20810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN756_20815 PF00664 ABC transporter transmembrane region DN756_20815 PF00005 ABC transporter DN756_20815 PF03412 Peptidase C39 family DN756_20825 PF06005 Cell division protein ZapB DN756_20840 PF00230 Major intrinsic protein DN756_20845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN756_20845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN756_20850 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN756_20855 PF00970 Oxidoreductase FAD-binding domain DN756_20855 PF00175 Oxidoreductase NAD-binding domain DN756_20860 PF05656 Protein of unknown function (DUF805) DN756_20865 PF07305 Protein of unknown function (DUF1454) DN756_20870 PF00121 Triosephosphate isomerase DN756_20875 PF03466 LysR substrate binding domain DN756_20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN756_20880 PF02585 GlcNAc-PI de-N-acetylase DN756_20885 PF03737 Aldolase/RraA DN756_20890 PF00939 Sodium:sulfate symporter transmembrane region DN756_20905 PF00365 Phosphofructokinase DN756_20910 PF01545 Cation efflux family DN756_20910 PF16916 Dimerisation domain of Zinc Transporter DN756_20920 PF04754 Putative transposase, YhgA-like DN756_20930 PF07813 LTXXQ motif family protein DN756_20935 PF00486 Transcriptional regulatory protein, C terminal DN756_20935 PF00072 Response regulator receiver domain DN756_20940 PF00672 HAMP domain DN756_20940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_20940 PF16527 Two-component sensor protein CpxA, periplasmic domain DN756_20940 PF00512 His Kinase A (phospho-acceptor) domain DN756_20945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN756_20945 PF12833 Helix-turn-helix domain DN756_20945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN756_20945 PF02805 Metal binding domain of Ada DN756_20950 PF00588 SpoU rRNA Methylase family DN756_20955 PF06426 Serine acetyltransferase, N-terminal DN756_20955 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_20965 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN756_20965 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN756_20970 PF02556 Preprotein translocase subunit SecB DN756_20975 PF00462 Glutaredoxin DN756_20980 PF00581 Rhodanese-like domain DN756_20985 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN756_20985 PF01676 Metalloenzyme superfamily DN756_20990 PF01551 Peptidase family M23 DN756_20995 PF04748 Divergent polysaccharide deacetylase DN756_21000 PF08240 Alcohol dehydrogenase GroES-like domain DN756_21000 PF00107 Zinc-binding dehydrogenase DN756_21005 PF00155 Aminotransferase class I and II DN756_21010 PF01370 NAD dependent epimerase/dehydratase family DN756_21015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DN756_21020 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DN756_21025 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DN756_21030 PF00535 Glycosyl transferase family 2 DN756_21035 PF01467 Cytidylyltransferase-like DN756_21040 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN756_21040 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN756_21040 PF06827 Zinc finger found in FPG and IleRS DN756_21045 PF00471 Ribosomal protein L33 DN756_21050 PF00830 Ribosomal L28 family DN756_21060 PF04002 RadC-like JAB domain DN756_21065 PF04127 DNA / pantothenate metabolism flavoprotein DN756_21065 PF02441 Flavoprotein DN756_21070 PF00692 dUTPase DN756_21075 PF00440 Bacterial regulatory proteins, tetR family DN756_21080 PF00156 Phosphoribosyl transferase domain DN756_21085 PF01138 3' exoribonuclease family, domain 1 DN756_21085 PF03725 3' exoribonuclease family, domain 2 DN756_21090 PF03755 YicC-like family, N-terminal region DN756_21090 PF08340 Domain of unknown function (DUF1732) DN756_21145 PF03458 UPF0126 domain DN756_21150 PF01653 NAD-dependent DNA ligase adenylation domain DN756_21150 PF03120 NAD-dependent DNA ligase OB-fold domain DN756_21155 PF00625 Guanylate kinase DN756_21160 PF01192 RNA polymerase Rpb6 DN756_21165 PF04607 Region found in RelA / SpoT proteins DN756_21165 PF13291 ACT domain DN756_21165 PF02824 TGS domain DN756_21170 PF12105 SpoU, rRNA methylase, C-terminal DN756_21170 PF00588 SpoU rRNA Methylase family DN756_21175 PF00271 Helicase conserved C-terminal domain DN756_21175 PF00270 DEAD/DEAH box helicase DN756_21175 PF17191 RecG wedge domain DN756_21185 PF03616 Sodium/glutamate symporter DN756_21190 PF00860 Permease family DN756_21195 PF05170 AsmA family DN756_21200 PF00583 Acetyltransferase (GNAT) family DN756_21200 PF09500 Putative thioesterase (yiiD_Cterm) DN756_21205 PF02580 D-Tyr-tRNA(Tyr) deacylase DN756_21210 PF03631 Virulence factor BrkB DN756_21215 PF13419 Haloacid dehalogenase-like hydrolase DN756_21225 PF00120 Glutamine synthetase, catalytic domain DN756_21225 PF03951 Glutamine synthetase, beta-Grasp domain DN756_21235 PF00989 PAS fold DN756_21235 PF00512 His Kinase A (phospho-acceptor) domain DN756_21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN756_21240 PF02954 Bacterial regulatory protein, Fis family DN756_21240 PF00072 Response regulator receiver domain DN756_21240 PF00158 Sigma-54 interaction domain DN756_21245 PF04055 Radical SAM superfamily DN756_21245 PF06969 HemN C-terminal domain DN756_21255 PF04220 Der GTPase activator (YihI) DN756_21265 PF01926 50S ribosome-binding GTPase DN756_21270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN756_21270 PF00476 DNA polymerase family A DN756_21270 PF01612 3'-5' exonuclease DN756_21270 PF01367 5'-3' exonuclease, C-terminal SAM fold DN756_21275 PF01323 DSBA-like thioredoxin domain DN756_21280 PF01636 Phosphotransferase enzyme family DN756_21285 PF06288 Protein of unknown function (DUF1040) DN756_21290 PF12804 MobA-like NTP transferase domain DN756_21295 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN756_21300 PF00872 Transposase, Mutator family DN756_21335 PF07729 FCD domain DN756_21335 PF00392 Bacterial regulatory proteins, gntR family DN756_21340 PF07690 Major Facilitator Superfamily DN756_21350 PF00294 pfkB family carbohydrate kinase DN756_21355 PF05025 RbsD / FucU transport protein family DN756_21360 PF02705 K+ potassium transporter DN756_21365 PF12592 Protein of unknown function (DUF3763) DN756_21365 PF17868 AAA lid domain DN756_21365 PF07728 AAA domain (dynein-related subfamily) DN756_21370 PF05762 VWA domain containing CoxE-like protein DN756_21375 PF03590 Aspartate-ammonia ligase DN756_21380 PF01037 Lrp/AsnC ligand binding domain DN756_21385 PF00258 Flavodoxin DN756_21395 PF13932 GidA associated domain DN756_21395 PF01134 Glucose inhibited division protein A DN756_21400 PF02527 rRNA small subunit methyltransferase G DN756_21405 PF03899 ATP synthase I chain DN756_21410 PF00119 ATP synthase A chain DN756_21415 PF00137 ATP synthase subunit C DN756_21420 PF00430 ATP synthase B/B' CF(0) DN756_21425 PF00213 ATP synthase delta (OSCP) subunit DN756_21430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_21430 PF00306 ATP synthase alpha/beta chain, C terminal domain DN756_21430 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN756_21435 PF00231 ATP synthase DN756_21440 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN756_21440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_21445 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN756_21445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN756_21450 PF12804 MobA-like NTP transferase domain DN756_21450 PF00132 Bacterial transferase hexapeptide (six repeats) DN756_21460 PF01380 SIS domain DN756_21465 PF12849 PBP superfamily domain DN756_21470 PF00528 Binding-protein-dependent transport system inner membrane component DN756_21475 PF00528 Binding-protein-dependent transport system inner membrane component DN756_21480 PF00005 ABC transporter DN756_21485 PF01895 PhoU domain DN756_21495 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN756_21500 PF00528 Binding-protein-dependent transport system inner membrane component DN756_21505 PF00528 Binding-protein-dependent transport system inner membrane component DN756_21510 PF13419 Haloacid dehalogenase-like hydrolase DN756_21520 PF00860 Permease family DN756_21540 PF07055 Enoyl reductase FAD binding domain DN756_21540 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DN756_21540 PF12241 Trans-2-enoyl-CoA reductase catalytic region DN756_21545 PF12631 MnmE helical domain DN756_21545 PF10396 GTP-binding protein TrmE N-terminus DN756_21545 PF01926 50S ribosome-binding GTPase DN756_21550 PF02096 60Kd inner membrane protein DN756_21550 PF14849 YidC periplasmic domain DN756_21555 PF01809 Putative membrane protein insertion efficiency factor DN756_21560 PF00825 Ribonuclease P DN756_21565 PF00468 Ribosomal protein L34 DN756_21580 PF09632 Rac1-binding domain DN756_21580 PF00069 Protein kinase domain DN756_21610 PF02387 IncFII RepA protein family DN756_21620 PF10723 Replication regulatory protein RepB DN756_21635 PF00665 Integrase core domain DN756_21650 PF07057 DNA helicase TraI DN756_21650 PF18340 DNA relaxase TraI 2B/2B-like domain DN756_21650 PF18272 single-stranded DNA binding TraI N-terminal subdomain DN756_21650 PF08751 TrwC relaxase DN756_21665 PF05658 Head domain of trimeric autotransporter adhesin DN756_21665 PF05662 Coiled stalk of trimeric autotransporter adhesin DN756_21665 PF03895 YadA-like membrane anchor domain DN756_21675 PF13700 Domain of unknown function (DUF4158) DN756_21675 PF01526 Tn3 transposase DDE domain DN756_21680 PF00239 Resolvase, N terminal domain DN756_21680 PF02796 Helix-turn-helix domain of resolvase DN756_21715 PF00665 Integrase core domain DN756_21725 PF05932 Tir chaperone protein (CesT) family DN756_21730 PF09020 YopE, N terminal DN756_21730 PF03545 Yersinia virulence determinant (YopE) DN756_21740 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DN756_21755 PF02195 ParB-like nuclease domain DN756_21755 PF18090 Centromere-binding protein HTH domain DN756_21760 PF13614 AAA domain DN756_21775 PF05818 Enterobacterial TraT complement resistance protein DN756_21780 PF05818 Enterobacterial TraT complement resistance protein DN756_21815 PF00872 Transposase, Mutator family DN756_21825 PF12468 Type III secretion system leucine rich repeat protein DN756_21840 PF05844 YopD protein DN756_21845 PF04888 Secretion system effector C (SseC) like family DN756_21850 PF07720 Tetratricopeptide repeat DN756_21855 PF04792 V antigen (LcrV) protein DN756_21860 PF07216 LcrG protein DN756_21865 PF09621 Type III secretion system regulator (LcrR) DN756_21870 PF00771 FHIPEP family DN756_21880 PF09474 Type III secretion system YscX (type_III_YscX) DN756_21890 PF09059 TyeA DN756_21895 PF07201 HrpJ-like domain DN756_21900 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN756_21900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN756_21900 PF18269 T3SS EscN ATPase C-terminal domain DN756_21905 PF07321 Type III secretion protein YscO DN756_21910 PF02120 Flagellar hook-length control protein FliK DN756_21915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN756_21920 PF00813 FliP family DN756_21925 PF01313 Bacterial export proteins, family 3 DN756_21930 PF01311 Bacterial export proteins, family 1 DN756_21935 PF01312 FlhB HrpN YscU SpaS Family DN756_21945 PF12833 Helix-turn-helix domain DN756_21945 PF02311 AraC-like ligand binding domain DN756_21950 PF17551 Family of unknown function (DUF5463) DN756_21955 PF05932 Tir chaperone protein (CesT) family DN756_21965 PF16693 Inner membrane component of T3SS, periplasmic domain DN756_21965 PF16697 Inner membrane component of T3SS, cytoplasmic domain DN756_21970 PF08988 Type III secretion system, cytoplasmic E component of needle DN756_21975 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DN756_21980 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) DN756_21985 PF09025 YopR, type III needle-polymerisation regulator DN756_21990 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI DN756_21995 PF01514 Secretory protein of YscJ/FliF family DN756_22000 PF06578 YOP proteins translocation protein K (YscK) DN756_22005 PF02108 Flagellar assembly protein FliH DN756_22010 PF09013 YopH, N-terminal DN756_22030 PF09013 YopH, N-terminal DN756_22030 PF00102 Protein-tyrosine phosphatase