YpsIP31758_2533 a24bd886c4ef31e5014a6b6f75973843 138 SMART SM00881 10 104 7.1E-24 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_2533 a24bd886c4ef31e5014a6b6f75973843 138 Pfam PF13380 CoA binding domain 14 130 3.9E-37 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_2533 a24bd886c4ef31e5014a6b6f75973843 138 Gene3D G3DSA:3.40.50.720 1 138 9.8E-40 T 12-10-2018 YpsIP31758_2533 a24bd886c4ef31e5014a6b6f75973843 138 SUPERFAMILY SSF51735 2 135 7.48E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Gene3D G3DSA:2.180.10.10 1242 1372 1.3E-29 T 12-10-2018 YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1297 1372 4.3E-25 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Gene3D G3DSA:3.90.930.1 867 1028 2.7E-9 T 12-10-2018 YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Gene3D G3DSA:3.90.930.1 594 736 3.5E-11 T 12-10-2018 YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Pfam PF03527 RHS protein 1269 1302 1.1E-10 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Pfam PF05593 RHS Repeat 1043 1079 1.1E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 Pfam PF05593 RHS Repeat 689 725 3.9E-7 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 PRINTS PR00394 RHS protein signature 1317 1337 4.3E-14 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 PRINTS PR00394 RHS protein signature 1263 1283 4.3E-14 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 PRINTS PR00394 RHS protein signature 1340 1359 4.3E-14 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 857 894 4.4E-8 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1064 1089 0.0023 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 605 646 1.2E-10 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 495 535 3.6E-8 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 815 855 3.0E-10 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1134 1170 6.8E-8 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 773 813 2.6E-9 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 647 688 1.4E-10 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 735 771 0.0015 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0698 e92b8e72f05fbb8b4f9e4a50ca18accc 1492 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 689 729 3.1E-11 T 12-10-2018 IPR006530 YD repeat YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 SUPERFAMILY SSF47648 1 68 9.42E-17 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 332 38.945 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 Pfam PF00591 Glycosyl transferase family, a/b domain 75 322 7.2E-99 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 Gene3D G3DSA:1.20.970.10 12 184 1.4E-124 T 12-10-2018 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 SUPERFAMILY SSF52418 71 329 5.63E-92 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 1.0E-13 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 330 2.9E-126 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 YpsIP31758_1934 762d06f75ddca4d11d04a61655d4a2b7 333 Gene3D G3DSA:3.40.1030.10 68 322 1.4E-124 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PIRSF PIRSF000724 1 387 3.6E-133 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.6E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 Pfam PF00162 Phosphoglycerate kinase 6 373 5.6E-140 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1260 165 373 2.0E-155 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.332 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1260 10 378 2.0E-155 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0849 2ae67bd6e19726b980a4684d810e7b8b 387 SUPERFAMILY SSF53748 3 383 1.18E-144 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:1.10.10.60 7 57 1.0E-20 T 12-10-2018 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF46689 8 57 6.66E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 5.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 5.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 Pfam PF06445 GyrI-like small molecule binding domain 129 281 3.3E-19 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:3.20.80.10 125 290 1.8E-20 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF55136 127 272 3.14E-18 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:1.10.10.60 58 122 2.9E-21 T 12-10-2018 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 SMART SM00342 23 106 1.4E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF46689 61 111 6.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1897 278eba049e09b3e8d6a3cee3280aa626 297 Pfam PF12833 Helix-turn-helix domain 30 107 8.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 2.9E-126 T 12-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 2.3E-51 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 Gene3D G3DSA:3.40.50.1100 19 324 1.1E-121 T 12-10-2018 YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 Gene3D G3DSA:3.40.50.1100 51 159 1.1E-121 T 12-10-2018 YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 PIRSF PIRSF006278 1 330 1.5E-94 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 64.069 T 12-10-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 YpsIP31758_2275 5bebda488e92ce3f97b530a68bc8460d 330 SUPERFAMILY SSF53686 8 328 3.4E-85 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Gene3D G3DSA:2.70.20.10 223 495 1.7E-146 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Gene3D G3DSA:1.10.290.10 293 422 1.7E-146 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Gene3D G3DSA:3.30.65.10 619 669 1.2E-5 T 12-10-2018 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 SUPERFAMILY SSF57783 633 665 8.67E-9 T 12-10-2018 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 528 542 9.4E-22 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 108 121 9.4E-22 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 9.4E-22 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 9.4E-22 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 9.4E-22 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 SMART SM00493 5 134 1.4E-20 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Gene3D G3DSA:1.10.460.10 168 608 1.7E-146 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Pfam PF01131 DNA topoisomerase 167 591 5.2E-104 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Gene3D G3DSA:3.40.50.140 5 162 1.6E-50 T 12-10-2018 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 SMART SM00436 134 229 9.4E-21 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Pfam PF01751 Toprim domain 7 141 1.3E-14 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 633 668 6.9E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 TIGRFAM TIGR01056 topB: DNA topoisomerase III 5 664 1.5E-192 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 SUPERFAMILY SSF56712 5 613 2.09E-164 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YpsIP31758_A0023 2859150197fb1a23caf3614dea1ed6e9 679 SMART SM00437 279 565 1.8E-69 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0022 adad7c5e2e777f3cb8bb64978d485a18 375 Pfam PF00589 Phage integrase family 120 274 7.2E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_B0022 adad7c5e2e777f3cb8bb64978d485a18 375 Gene3D G3DSA:1.10.150.130 6 119 1.4E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_B0022 adad7c5e2e777f3cb8bb64978d485a18 375 Gene3D G3DSA:1.10.443.10 120 288 3.7E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_B0022 adad7c5e2e777f3cb8bb64978d485a18 375 SUPERFAMILY SSF56349 10 283 1.18E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 SUPERFAMILY SSF51011 527 604 8.4E-9 T 12-10-2018 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 SUPERFAMILY SSF51445 114 527 4.31E-92 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 Pfam PF00128 Alpha amylase, catalytic domain 174 490 2.6E-75 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 PIRSF PIRSF036918 1 606 9.2E-249 T 12-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 SMART SM00642 124 518 4.1E-88 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 99 4.8E-7 T 12-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 SUPERFAMILY SSF81296 11 95 3.08E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 Gene3D G3DSA:2.60.40.1180 522 605 3.4E-7 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_3131 d081d0fdbd5c9726536f4ecec24cbd25 609 Gene3D G3DSA:3.20.20.80 113 520 3.4E-127 T 12-10-2018 YpsIP31758_0275 502143d9bba060312c92054fac12ce10 220 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.365 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YpsIP31758_0275 502143d9bba060312c92054fac12ce10 220 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.6E-32 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YpsIP31758_0275 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 12-10-2018 YpsIP31758_0275 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 12-10-2018 YpsIP31758_0275 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 12-10-2018 YpsIP31758_3368 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Gene3D G3DSA:3.40.80.10 1 180 1.7E-55 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_3368 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 166 3.1E-26 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_3368 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SUPERFAMILY SSF55846 2 181 4.45E-66 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_3368 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SMART SM00644 16 166 1.4E-51 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_2747 48794d82e77d443ab485ab515e6fd7f9 231 SUPERFAMILY SSF53639 19 210 1.33E-62 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_2747 48794d82e77d443ab485ab515e6fd7f9 231 Gene3D G3DSA:3.40.225.10 18 230 1.8E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_2747 48794d82e77d443ab485ab515e6fd7f9 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 203 1.1E-48 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_2747 48794d82e77d443ab485ab515e6fd7f9 231 SMART SM01007 25 204 2.1E-64 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 Gene3D G3DSA:2.40.128.130 755 1067 2.1E-67 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 Pfam PF03797 Autotransporter beta-domain 800 1044 3.2E-37 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SUPERFAMILY SSF51126 162 739 3.45E-46 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 635 1067 5.1E-111 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SUPERFAMILY SSF103515 758 1067 1.31E-42 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00869 796 1055 5.3E-30 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 Gene3D G3DSA:2.160.20.20 112 331 1.3E-10 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 Gene3D G3DSA:2.160.20.20 332 741 3.0E-65 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 Pfam PF03212 Pertactin 632 738 1.4E-12 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 198 218 1700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 415 437 5300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 335 357 1900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 498 520 3900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 167 191 590.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4055 1e831b6c815658dfe0d61654af953409 1067 SMART SM00710 465 489 6300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF51246 278 353 2.2E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.684 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.30.470.20 152 354 2.6E-79 T 12-10-2018 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF52440 2 74 3.17E-15 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF56059 79 274 1.02E-56 T 12-10-2018 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.40.50.20 1 70 4.5E-31 T 12-10-2018 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 324 3.0E-108 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 Pfam PF02222 ATP-grasp domain 88 254 3.0E-53 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YpsIP31758_3018 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.30.1490.20 94 151 5.1E-21 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:1.10.1780.10 1 147 1.5E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF52540 546 851 2.94E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 842 8.8E-26 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF52540 159 545 1.12E-99 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.8E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SMART SM01086 766 855 2.3E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SUPERFAMILY SSF81923 4 156 1.86E-41 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SMART SM00382 198 344 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 SMART SM00382 597 733 5.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:3.40.50.300 550 764 3.6E-92 T 12-10-2018 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:1.10.8.60 766 857 3.4E-26 T 12-10-2018 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.4E-9 T 12-10-2018 IPR004176 Clp, N-terminal YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 4.6E-15 T 12-10-2018 IPR004176 Clp, N-terminal YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.0E-56 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:3.40.50.300 148 342 2.8E-74 T 12-10-2018 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 YpsIP31758_3212 95d29fcd7c1afef6e7005072941824a5 857 Gene3D G3DSA:3.40.50.300 343 544 8.6E-70 T 12-10-2018 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 Gene3D G3DSA:3.40.630.20 1 215 5.1E-83 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.116 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 5.0E-83 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 214 1.7E-89 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.1E-48 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.1E-48 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.1E-48 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.1E-48 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 5.1E-48 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 SUPERFAMILY SSF53182 1 214 2.22E-76 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 YpsIP31758_1120 9f55cf1f8d3d2c917db30f1aa9e420d5 215 PIRSF PIRSF015592 1 213 1.1E-89 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 473 2.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 168 9.9E-7 T 12-10-2018 IPR029150 Double Cache domain 3 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 Gene3D G3DSA:3.30.565.10 324 476 3.0E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 Gene3D G3DSA:1.10.287.130 204 316 5.3E-13 T 12-10-2018 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 SUPERFAMILY SSF55874 311 472 7.47E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 SMART SM00388 255 320 2.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 9.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 SUPERFAMILY SSF103190 56 170 1.14E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 SUPERFAMILY SSF47384 254 319 1.24E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_0876 74ba05934c540126db95aba043ff8511 477 SMART SM00387 364 474 6.9E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 SMART SM00938 4 105 9.7E-69 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 PIRSF PIRSF039144 1 112 4.5E-58 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 Gene3D G3DSA:3.30.70.120 1 112 7.8E-49 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YpsIP31758_1155 1e929a88e07fba04ea99e462ea391b5c 112 SUPERFAMILY SSF54913 1 112 5.4E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 529 652 3.1E-46 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 SUPERFAMILY SSF55604 422 495 1.7E-17 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 Pfam PF00367 phosphotransferase system, EIIB 425 457 4.9E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 Gene3D G3DSA:2.70.70.10 517 676 4.3E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 Pfam PF02378 Phosphotransferase system, EIIC 12 324 4.9E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 2.0E-202 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 SUPERFAMILY SSF51261 522 672 1.46E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 Gene3D G3DSA:3.30.1360.60 418 498 8.2E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 482 4.0E-20 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YpsIP31758_2908 cdbad14e18bb7b540c87f3c95379df0e 677 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 649 3.8E-46 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_1574 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1574 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1574 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1574 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 690 2.5E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 Gene3D G3DSA:3.90.1760.10 717 839 2.7E-21 T 12-10-2018 IPR037017 Anthrax toxin, edema factor, central domain superfamily GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 Gene3D G3DSA:3.30.70.1720 843 988 1.1E-7 T 12-10-2018 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 Gene3D G3DSA:2.180.10.10 1 690 1.8E-269 T 12-10-2018 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 Pfam PF03497 Anthrax toxin LF subunit 697 799 3.7E-19 T 12-10-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 YpsIP31758_1823 0642958b2087c23987ac1bdd1e7433fc 994 SUPERFAMILY SSF81298 674 984 3.01E-118 T 12-10-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 SUPERFAMILY SSF161098 29 254 8.18E-37 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 Gene3D G3DSA:1.10.3720.10 27 264 1.0E-41 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 Gene3D G3DSA:1.10.3720.10 281 525 3.1E-30 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 SUPERFAMILY SSF161098 286 519 1.68E-35 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 254 2.0E-6 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1349 e9ea3797628c6d5da1adba182e4f68ad 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 524 1.2E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1481 4e2898662c0b563eeae46415848658c6 455 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 448 29.763 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 YpsIP31758_1481 4e2898662c0b563eeae46415848658c6 455 Gene3D G3DSA:3.60.120.10 1 455 1.5E-172 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_1481 4e2898662c0b563eeae46415848658c6 455 Pfam PF00425 chorismate binding enzyme 189 438 4.1E-65 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YpsIP31758_1481 4e2898662c0b563eeae46415848658c6 455 SUPERFAMILY SSF56322 23 446 9.94E-98 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_1481 4e2898662c0b563eeae46415848658c6 455 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 120 444 2.8E-102 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF51735 5 198 1.35E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 3.0E-26 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF52413 311 419 6.02E-26 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.3E-118 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Gene3D G3DSA:3.40.50.720 205 420 6.7E-59 T 12-10-2018 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Gene3D G3DSA:3.40.50.720 2 202 1.7E-63 T 12-10-2018 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 PIRSF PIRSF500136 1 420 4.5E-147 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 187 6.4E-58 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 PIRSF PIRSF000124 4 418 5.0E-73 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 SMART SM00984 324 420 2.9E-26 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 78.968 T 12-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 YpsIP31758_0185 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 2.0E-19 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1902 9d2cbe09cd906311ecf5d1def1764518 332 SUPERFAMILY SSF51735 1 318 8.82E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1902 9d2cbe09cd906311ecf5d1def1764518 332 Gene3D G3DSA:3.90.25.10 178 315 4.3E-114 T 12-10-2018 YpsIP31758_1902 9d2cbe09cd906311ecf5d1def1764518 332 Gene3D G3DSA:3.40.50.720 6 305 4.3E-114 T 12-10-2018 YpsIP31758_1902 9d2cbe09cd906311ecf5d1def1764518 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 4.5E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 Pfam PF07514 Putative helicase 29 245 1.1E-37 T 12-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 278 394 4.3E-15 T 12-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 SUPERFAMILY SSF46785 273 395 1.58E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 Gene3D G3DSA:1.10.10.10 278 340 1.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 240 1.4E-77 T 12-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 Gene3D G3DSA:2.40.10.200 294 391 1.2E-31 T 12-10-2018 YpsIP31758_3687 e9b7951afd9ad198a1c82de056bc5095 398 Gene3D G3DSA:1.10.3210.40 30 250 2.8E-16 T 12-10-2018 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 Pfam PF00557 Metallopeptidase family M24 182 412 2.8E-64 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 2.9E-35 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.6E-5 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 1.6E-5 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 SMART SM01011 1 136 1.2E-56 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 Gene3D G3DSA:3.40.350.10 1 171 6.9E-65 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 SUPERFAMILY SSF53092 1 174 2.56E-52 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 Gene3D G3DSA:3.90.230.10 172 437 1.3E-104 T 12-10-2018 YpsIP31758_0860 fae2900db54076a49ef688740beed212 437 SUPERFAMILY SSF55920 175 433 4.84E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SUPERFAMILY SSF81923 12 127 3.53E-17 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Gene3D G3DSA:3.40.50.300 380 558 2.3E-41 T 12-10-2018 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Gene3D G3DSA:3.40.50.300 564 780 2.0E-66 T 12-10-2018 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SMART SM01086 782 875 1.9E-12 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SMART SM00382 234 379 6.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SMART SM00382 611 772 1.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SUPERFAMILY SSF52540 560 852 3.53E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 4.5E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 4.5E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 4.5E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 4.5E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Gene3D G3DSA:1.10.1780.10 1 161 4.8E-45 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.1E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Gene3D G3DSA:1.10.8.60 782 877 5.9E-12 T 12-10-2018 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Gene3D G3DSA:3.40.50.300 186 378 7.7E-63 T 12-10-2018 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 9.0E-14 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 SUPERFAMILY SSF52540 196 531 4.14E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2505 b577b37a734fa3afb02f5f2909277d3f 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 3.3E-39 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SMART SM00874 403 471 1.5E-31 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:2.40.50.140 39 154 6.3E-74 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SUPERFAMILY SSF54991 696 794 1.57E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SUPERFAMILY SSF55681 467 690 8.95E-56 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SUPERFAMILY SSF50249 36 195 4.65E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SUPERFAMILY SSF46955 404 475 1.56E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SMART SM00873 212 385 1.0E-99 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:3.30.56.10 7 180 6.3E-74 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SMART SM00896 701 794 4.1E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:3.30.56.10 401 475 7.9E-29 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:3.30.70.380 702 795 5.5E-32 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-28 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.286 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 SUPERFAMILY SSF56037 196 393 1.36E-77 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Pfam PF03483 B3/4 domain 212 385 1.3E-71 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.2E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.3E-292 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:3.30.930.10 485 693 3.0E-65 T 12-10-2018 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Gene3D G3DSA:3.50.40.10 197 395 2.9E-83 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 YpsIP31758_1717 3110bff6e8caee0e913ba11d41543a64 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.1E-20 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YpsIP31758_1663 10b284b34d89e39d96858c444243d78d 815 Gene3D G3DSA:2.60.40.3110 244 330 6.7E-8 T 12-10-2018 YpsIP31758_1663 10b284b34d89e39d96858c444243d78d 815 Pfam PF00577 Outer membrane usher protein 234 712 8.8E-30 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_1663 10b284b34d89e39d96858c444243d78d 815 Pfam PF13953 PapC C-terminal domain 739 801 2.8E-11 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_1663 10b284b34d89e39d96858c444243d78d 815 Gene3D G3DSA:2.60.40.2610 643 733 1.0E-9 T 12-10-2018 YpsIP31758_1738 2a23e27f0094943077626fe2ef86c6c9 367 Pfam PF01594 AI-2E family transporter 17 346 8.4E-50 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 SUPERFAMILY SSF54631 285 419 3.79E-24 T 12-10-2018 YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF00571 CBS domain 365 416 1.4E-5 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 SUPERFAMILY SSF56176 430 512 1.04E-17 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF03471 Transporter associated domain 431 508 4.8E-17 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 Gene3D G3DSA:3.10.580.10 278 433 2.7E-44 T 12-10-2018 YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 Pfam PF03741 Integral membrane protein TerC family 14 203 1.0E-48 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 SMART SM01091 428 509 6.0E-21 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_2367 9777c5404470ab0a0c1d8f65cc3478af 514 Gene3D G3DSA:3.30.465.10 434 509 1.8E-16 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_2356 98895e449c1d7d6e84e03baf6ac73c2c 165 SMART SM00903 15 162 3.7E-49 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 YpsIP31758_2356 98895e449c1d7d6e84e03baf6ac73c2c 165 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 164 1.1E-75 T 12-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 YpsIP31758_2356 98895e449c1d7d6e84e03baf6ac73c2c 165 SUPERFAMILY SSF50475 11 162 5.89E-44 T 12-10-2018 YpsIP31758_2356 98895e449c1d7d6e84e03baf6ac73c2c 165 Gene3D G3DSA:2.30.110.10 1 164 2.9E-36 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 YpsIP31758_2356 98895e449c1d7d6e84e03baf6ac73c2c 165 Pfam PF01613 Flavin reductase like domain 15 163 3.0E-24 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 SUPERFAMILY SSF48024 4 103 5.23E-8 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 SMART SM00382 189 409 1.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 Gene3D G3DSA:1.10.860.10 1 140 2.5E-5 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 Pfam PF03796 DnaB-like helicase C terminal domain 173 421 2.7E-71 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 Pfam PF00772 DnaB-like helicase N terminal domain 4 93 4.1E-8 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 Gene3D G3DSA:3.40.50.300 156 429 1.9E-77 T 12-10-2018 YpsIP31758_2244 0101e0ab38be1c1c7da837f7708e1339 457 SUPERFAMILY SSF52540 173 421 3.49E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.50.740 96 623 0.0 T 12-10-2018 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 92 1.1E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 SUPERFAMILY SSF53706 37 700 3.27E-201 T 12-10-2018 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.4E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 SUPERFAMILY SSF50692 688 828 3.62E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.325 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF00384 Molybdopterin oxidoreductase 96 568 8.0E-89 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 SMART SM00926 39 93 1.2E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:2.40.40.20 704 828 1.8E-48 T 12-10-2018 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.40.228.10 175 703 0.0 T 12-10-2018 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Gene3D G3DSA:3.30.200.210 39 666 0.0 T 12-10-2018 YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 2.1E-6 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YpsIP31758_1273 3987fa0b633faf259b085cf1f981d82a 830 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 Gene3D G3DSA:3.40.50.620 1 232 2.3E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.435 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 5.4E-83 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 2.7E-81 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 PIRSF PIRSF006293 1 226 2.3E-82 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YpsIP31758_3085 672dab55635d0342b33c91029a4181cd 232 SUPERFAMILY SSF52402 1 215 3.53E-67 T 12-10-2018 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 PIRSF PIRSF006205 1 398 1.4E-154 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 3.9E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 9.6E-178 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.1E-39 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.9E-47 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF51735 2 150 2.9E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.305 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF55347 126 274 6.54E-64 T 12-10-2018 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Gene3D G3DSA:1.10.1740.10 312 398 1.4E-31 T 12-10-2018 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 Gene3D G3DSA:3.40.50.720 1 150 5.8E-58 T 12-10-2018 YpsIP31758_1017 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF69055 301 395 7.19E-29 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YpsIP31758_3738 561603fdef7ed967e2be22e89b98fce2 77 Gene3D G3DSA:3.40.1620.10 2 40 5.8E-7 T 12-10-2018 YpsIP31758_3738 561603fdef7ed967e2be22e89b98fce2 77 SUPERFAMILY SSF143120 5 46 3.53E-9 T 12-10-2018 IPR036165 YefM-like superfamily YpsIP31758_3738 561603fdef7ed967e2be22e89b98fce2 77 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 47 4.5E-7 T 12-10-2018 YpsIP31758_3738 561603fdef7ed967e2be22e89b98fce2 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 42 4.2E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Pfam PF00394 Multicopper oxidase 204 290 6.5E-7 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Pfam PF07731 Multicopper oxidase 416 532 8.4E-25 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 SUPERFAMILY SSF49503 414 531 7.66E-27 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 4.7E-6 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Pfam PF07732 Multicopper oxidase 53 166 5.6E-32 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Gene3D G3DSA:2.60.40.420 176 326 1.4E-43 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 SUPERFAMILY SSF49503 17 169 1.42E-28 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 SUPERFAMILY SSF49503 172 292 1.19E-32 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Gene3D G3DSA:2.60.40.420 30 175 1.7E-42 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3352 638b50d2d2706acc9e84185bc3dfe99b 533 Gene3D G3DSA:2.60.40.420 346 532 2.8E-49 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_1024 993945f867693e838b335f638b59232a 176 Gene3D G3DSA:3.10.129.10 5 148 3.7E-68 T 12-10-2018 YpsIP31758_1024 993945f867693e838b335f638b59232a 176 SUPERFAMILY SSF54637 10 151 1.1E-50 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_1024 993945f867693e838b335f638b59232a 176 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.239 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_1024 993945f867693e838b335f638b59232a 176 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.7E-60 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_1024 993945f867693e838b335f638b59232a 176 Pfam PF07977 FabA-like domain 17 141 2.1E-40 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 Gene3D G3DSA:2.40.40.20 272 343 3.5E-11 T 12-10-2018 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 348 73.553 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 342 4.4E-156 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 340 1.4E-142 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 342 2.5E-146 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 SUPERFAMILY SSF55729 1 342 2.3E-131 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_2120 835e4c6437ffe79582cdd909c29c0977 349 Gene3D G3DSA:3.40.630.30 1 271 6.4E-121 T 12-10-2018 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 5.4E-180 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:1.10.287.40 1 104 3.8E-19 T 12-10-2018 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:3.30.930.10 105 430 7.8E-116 T 12-10-2018 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF55681 116 425 3.14E-100 T 12-10-2018 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 42.014 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF46589 1 112 7.32E-31 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 6.9E-30 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 406 7.3E-36 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PIRSF PIRSF001529 1 430 6.9E-183 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.3E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.3E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.3E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.3E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2593 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.3E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YpsIP31758_2479 d1f232171211037662c234547932dd79 436 Pfam PF04055 Radical SAM superfamily 80 245 2.3E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2479 d1f232171211037662c234547932dd79 436 Gene3D G3DSA:3.20.20.70 73 436 3.4E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2479 d1f232171211037662c234547932dd79 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 1.9E-10 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain YpsIP31758_2479 d1f232171211037662c234547932dd79 436 SUPERFAMILY SSF102114 74 400 1.03E-34 T 12-10-2018 YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:3.10.450.350 178 280 2.5E-31 T 12-10-2018 YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:2.70.70.10 282 411 9.2E-48 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 159 1.6E-6 T 12-10-2018 IPR007340 Opacity-associated protein A YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 SUPERFAMILY SSF51261 162 406 1.31E-69 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF01551 Peptidase family M23 311 405 1.3E-33 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 SMART SM00257 96 141 2.9E-5 T 12-10-2018 IPR018392 LysM domain YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:3.10.450.350 83 173 2.6E-12 T 12-10-2018 YpsIP31758_2026 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.9E-8 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.5E-52 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 SUPERFAMILY SSF53187 188 407 8.79E-55 T 12-10-2018 YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 SMART SM00646 250 404 8.0E-65 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF11741 AMIN domain 39 142 2.1E-27 T 12-10-2018 IPR021731 AMIN domain YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:2.60.40.3500 25 145 6.7E-34 T 12-10-2018 YpsIP31758_0994 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:3.40.630.40 175 415 3.7E-90 T 12-10-2018 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 160 4.4E-11 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00304 184 237 6.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:1.10.287.130 188 302 3.0E-37 T 12-10-2018 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 453 6.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00388 238 300 1.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00672 HAMP domain 184 233 1.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF47384 224 299 2.16E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:3.30.450.210 27 147 5.1E-11 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:3.30.565.10 304 454 2.6E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF55874 289 455 3.93E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0083 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00387 345 455 1.6E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1841 abc0a426398de95ca89f0541c2b20fa6 264 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 1.4E-77 T 12-10-2018 IPR010846 Protein of unknown function DUF1460 YpsIP31758_1841 abc0a426398de95ca89f0541c2b20fa6 264 SUPERFAMILY SSF54001 33 264 1.67E-80 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_1841 abc0a426398de95ca89f0541c2b20fa6 264 Gene3D G3DSA:1.10.3670.10 49 172 7.4E-23 T 12-10-2018 YpsIP31758_1841 abc0a426398de95ca89f0541c2b20fa6 264 Gene3D G3DSA:2.30.260.10 173 264 2.6E-21 T 12-10-2018 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 7 319 2.7E-90 T 12-10-2018 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 Pfam PF00762 Ferrochelatase 6 318 2.8E-107 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 SUPERFAMILY SSF53800 3 318 1.44E-99 T 12-10-2018 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 TIGRFAM TIGR00109 hemH: ferrochelatase 3 318 1.1E-105 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.298 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YpsIP31758_3053 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 163 301 2.7E-90 T 12-10-2018 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.8E-14 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 6.5E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 SUPERFAMILY SSF54211 3 203 4.63E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 SUPERFAMILY SSF55060 205 381 1.15E-52 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF08544 GHMP kinases C terminal 279 361 5.8E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.547 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Gene3D G3DSA:3.30.230.10 23 201 1.2E-127 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 3.8E-46 T 12-10-2018 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 3.8E-46 T 12-10-2018 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 3.8E-46 T 12-10-2018 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 3.8E-46 T 12-10-2018 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 2.6E-152 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 Gene3D G3DSA:3.30.70.890 202 357 1.2E-127 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 92 103 3.1E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 112 130 3.1E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 263 277 3.1E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 27 45 3.1E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 PIRSF PIRSF000530 1 383 4.4E-118 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YpsIP31758_2857 39bcf1e108cf7cb32785f3d2f4eb1125 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04545 Sigma-70, region 4 264 317 2.7E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.924 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.10.10 169 244 5.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.10.10 246 322 1.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Gene3D G3DSA:1.10.601.10 86 168 5.5E-46 T 12-10-2018 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 3.6E-144 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.1E-11 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 Pfam PF04542 Sigma-70 region 2 96 165 3.2E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_3293 03e9d7d0b280ffd118c8e849e1d8b881 332 SUPERFAMILY SSF88659 227 324 1.68E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.8E-96 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 9.0E-135 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 Gene3D G3DSA:1.20.210.10 30 565 3.5E-189 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 SUPERFAMILY SSF81442 43 560 3.14E-179 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3099 c7740246da51ef6159bc73f5a49cbcd2 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 Pfam PF10135 Rod binding protein 49 95 2.5E-16 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 3.1E-20 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 Gene3D G3DSA:2.10.70.40 186 238 5.5E-46 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 SMART SM00047 140 306 1.6E-42 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 295 1.7E-107 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 Gene3D G3DSA:1.10.530.10 152 291 5.5E-46 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 110 135 5.8E-99 T 12-10-2018 YpsIP31758_2316 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.8E-99 T 12-10-2018 YpsIP31758_0195 47a6f2e785d26ce3633a28490d2a6e32 406 Pfam PF07219 HemY protein N-terminus 26 132 6.1E-32 T 12-10-2018 IPR010817 HemY, N-terminal YpsIP31758_0195 47a6f2e785d26ce3633a28490d2a6e32 406 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 3.8E-133 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 YpsIP31758_0195 47a6f2e785d26ce3633a28490d2a6e32 406 Gene3D G3DSA:1.25.40.10 154 404 1.9E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0195 47a6f2e785d26ce3633a28490d2a6e32 406 SUPERFAMILY SSF48452 123 388 6.2E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04539 Sigma-70 region 3 457 532 3.5E-29 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.659 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04545 Sigma-70, region 4 546 599 1.0E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.601.10 113 447 9.9E-148 T 12-10-2018 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 451 527 5.5E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04546 Sigma-70, non-essential region 139 347 3.9E-74 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.220.120 1 64 5.3E-31 T 12-10-2018 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.7E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 528 612 1.8E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.0E-30 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 YpsIP31758_0553 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88946 115 445 2.35E-102 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Gene3D G3DSA:1.10.10.10 214 284 3.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 SUPERFAMILY SSF88659 200 284 8.04E-19 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.4E-7 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Gene3D G3DSA:1.20.120.1810 2 122 8.5E-27 T 12-10-2018 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.1E-129 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.358 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 4.0E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Pfam PF04542 Sigma-70 region 2 53 122 3.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 PIRSF PIRSF000770 5 285 5.3E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 Pfam PF04545 Sigma-70, region 4 229 280 3.2E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 SUPERFAMILY SSF88946 12 122 2.98E-39 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0242 86b1eab095b73d94c7c2c6a92f9e6995 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.235 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.1E-31 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 500 686 1.1E-71 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:1.20.58.310 9 109 6.2E-38 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.5E-43 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.8E-257 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 PIRSF PIRSF015589 1 687 1.1E-241 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF143724 107 312 2.35E-60 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.7E-143 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 317 499 5.1E-74 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 500 682 1.3E-68 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF140356 3 105 2.22E-34 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 315 497 1.0E-55 T 12-10-2018 YpsIP31758_1227 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.1840.10 110 307 1.5E-75 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 3.0E-17 T 12-10-2018 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 1.5E-85 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Gene3D G3DSA:3.20.20.20 37 99 1.5E-12 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 PIRSF PIRSF005784 3 190 7.4E-86 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Pfam PF04060 Putative Fe-S cluster 44 76 2.2E-14 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Gene3D G3DSA:3.30.70.20 142 185 4.6E-7 T 12-10-2018 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 SUPERFAMILY SSF54862 38 176 1.78E-29 T 12-10-2018 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 25.456 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 YpsIP31758_1895 72f8dcab78943cd7d2ebfdd9b9586819 207 Gene3D G3DSA:3.30.70.20 100 141 1.4E-7 T 12-10-2018 YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 SMART SM00470 7 96 8.0E-8 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 SUPERFAMILY SSF109709 89 198 6.15E-13 T 12-10-2018 YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 SUPERFAMILY SSF110849 5 99 1.73E-16 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 Gene3D G3DSA:1.10.10.2830 83 196 4.8E-6 T 12-10-2018 YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 Gene3D G3DSA:3.90.1530.30 20 82 6.5E-8 T 12-10-2018 YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 Pfam PF02195 ParB-like nuclease domain 17 96 1.2E-9 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_0771 f07633148a1632ec8282a6e0e0a2a416 296 Pfam PF07506 RepB plasmid partitioning protein 99 265 1.2E-9 T 12-10-2018 IPR011111 RepB plasmid partition YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Gene3D G3DSA:1.10.150.130 9 103 1.9E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Gene3D G3DSA:1.10.443.10 116 292 7.6E-58 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 1.2E-107 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Pfam PF00589 Phage integrase family 117 284 6.8E-52 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 4.3E-22 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 56.232 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 SUPERFAMILY SSF56349 113 296 8.24E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0207 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 SUPERFAMILY SSF47823 10 102 5.1E-11 T 12-10-2018 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Pfam PF00128 Alpha amylase, catalytic domain 30 374 4.0E-122 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 174 477 6.5E-108 T 12-10-2018 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51011 477 553 1.5E-17 T 12-10-2018 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 SMART SM00642 15 416 7.3E-154 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51445 5 474 4.37E-151 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 2 110 2.4E-48 T 12-10-2018 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.90.400.10 111 173 6.7E-27 T 12-10-2018 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Pfam PF11941 Domain of unknown function (DUF3459) 461 536 1.0E-4 T 12-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 552 2.9E-248 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 YpsIP31758_0430 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:2.60.40.1180 478 552 1.7E-15 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:3.40.50.2300 1 142 2.9E-30 T 12-10-2018 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00072 Response regulator receiver domain 6 120 8.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.731 T 12-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00421 148 205 2.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00448 4 120 4.3E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF46894 144 206 1.84E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF52172 3 136 2.7E-22 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:1.10.10.10 143 207 2.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.1E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.1E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2764 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.1E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2102 555a5e042fb9cc439c50ca440b15b39a 384 SUPERFAMILY SSF53448 68 288 3.09E-16 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2102 555a5e042fb9cc439c50ca440b15b39a 384 Gene3D G3DSA:3.90.550.10 48 244 1.6E-5 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2102 555a5e042fb9cc439c50ca440b15b39a 384 Pfam PF13506 Glycosyl transferase family 21 97 265 6.7E-39 T 12-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF02080 TrkA-C domain 293 359 1.3E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF02080 TrkA-C domain 211 272 9.0E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.3E-49 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.9E-44 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 8.6E-47 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 9.0E-46 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 SUPERFAMILY SSF116726 206 271 1.7E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Gene3D G3DSA:3.30.70.1450 199 274 2.3E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.297 T 12-10-2018 IPR023018 Transport protein YidE, putative YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 Gene3D G3DSA:3.30.70.1450 288 365 2.6E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_4141 7af750baa3628c306fce7810c3a3e5b6 552 SUPERFAMILY SSF116726 272 358 3.66E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.10.20.70 2 104 1.0E-41 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-137 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 SMART SM01230 102 379 1.4E-148 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 7.0E-32 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.30.590.10 105 457 1.8E-149 T 12-10-2018 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.7E-215 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF55931 102 468 7.65E-138 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 YpsIP31758_0027 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.5E-23 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 258 3.0E-6 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 Gene3D G3DSA:3.40.50.720 1 131 3.0E-36 T 12-10-2018 YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 Gene3D G3DSA:3.30.360.10 132 373 2.6E-63 T 12-10-2018 YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 SUPERFAMILY SSF51735 4 158 2.04E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2970 ac6e7b6c9191e90223eca0e36570b88a 377 SUPERFAMILY SSF55347 135 323 1.08E-32 T 12-10-2018 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SMART SM00634 556 642 1.2E-20 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SMART SM00634 458 547 9.9E-26 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:2.60.40.1080 751 841 1.2E-25 T 12-10-2018 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:2.40.160.160 102 346 1.7E-109 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:2.60.40.10 648 749 6.9E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:3.10.100.10 842 941 2.1E-56 T 12-10-2018 IPR016186 C-type lectin-like/link domain superfamily YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SUPERFAMILY SSF49373 458 550 9.61E-41 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Pfam PF09134 Invasin, domain 3 653 748 8.8E-15 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Pfam PF09134 Invasin, domain 3 554 648 3.8E-17 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 PRINTS PR01369 Intimin signature 287 306 8.9E-9 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 PRINTS PR01369 Intimin signature 219 238 8.9E-9 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 PRINTS PR01369 Intimin signature 191 206 8.9E-9 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:2.60.40.10 450 550 4.8E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Pfam PF11924 Inverse autotransporter, beta-domain 77 339 6.5E-105 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Gene3D G3DSA:2.60.40.10 551 647 6.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Pfam PF02369 Bacterial Ig-like domain (group 1) 457 549 2.2E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SUPERFAMILY SSF49373 553 646 1.49E-24 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SUPERFAMILY SSF56436 842 940 9.23E-56 T 12-10-2018 IPR016187 C-type lectin fold YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SUPERFAMILY SSF49373 652 745 6.91E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 SUPERFAMILY SSF49373 752 840 8.24E-31 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2329 f163ff8975c0cb4f2d4beb7457ffe694 941 Pfam PF07979 Intimin C-type lectin domain 841 919 4.1E-11 T 12-10-2018 IPR013117 Intimin, C-terminal YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-185 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:2.40.33.10 71 167 1.4E-145 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.40.1380.20 336 467 2.7E-44 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF50800 70 167 3.14E-29 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF51621 1 338 3.0E-100 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF52935 323 469 9.68E-34 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.2E-78 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.20.20.60 4 332 1.4E-145 T 12-10-2018 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 2.9E-152 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1749 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.2E-27 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 5.1E-35 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.40.50.720 7 328 2.6E-110 T 12-10-2018 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF51735 5 157 9.24E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PIRSF PIRSF000148 4 336 6.2E-98 T 12-10-2018 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 2.3E-25 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF55347 132 318 5.06E-53 T 12-10-2018 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.30.360.10 130 314 2.6E-110 T 12-10-2018 YpsIP31758_1419 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SMART SM00859 6 121 1.8E-34 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_1763 43004045a45df006aa70e426bd3b8adc 199 Gene3D G3DSA:1.10.357.10 2 199 2.7E-58 T 12-10-2018 YpsIP31758_1763 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF46689 2 77 6.67E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1763 43004045a45df006aa70e426bd3b8adc 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 186 6.4E-10 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YpsIP31758_1763 43004045a45df006aa70e426bd3b8adc 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 3.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_1763 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF48498 85 196 3.86E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF52540 1 141 5.03E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 Gene3D G3DSA:3.40.50.300 1 141 1.2E-25 T 12-10-2018 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 PIRSF PIRSF035805 1 194 2.2E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 Gene3D G3DSA:3.30.60.20 144 190 2.8E-10 T 12-10-2018 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF57716 142 191 1.28E-17 T 12-10-2018 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 36.002 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 YpsIP31758_1964 a28376b238c84186360a863fc02a5b88 196 Pfam PF00265 Thymidine kinase 2 186 6.5E-62 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF90123 7 327 1.29E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF52540 335 572 1.96E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 Pfam PF00664 ABC transporter transmembrane region 63 287 4.4E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 SMART SM00382 365 550 4.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 Pfam PF00005 ABC transporter 356 503 7.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:3.40.50.300 330 574 8.3E-78 T 12-10-2018 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 2.7E-156 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 YpsIP31758_2601 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:1.20.1560.10 3 321 1.1E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1037 71038f70e3f6eb4af97bdef0935ff4dd 227 Pfam PF04170 NlpE N-terminal domain 38 122 6.6E-26 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE YpsIP31758_1037 71038f70e3f6eb4af97bdef0935ff4dd 227 Gene3D G3DSA:2.40.128.300 19 111 2.0E-29 T 12-10-2018 YpsIP31758_1037 71038f70e3f6eb4af97bdef0935ff4dd 227 Pfam PF17185 NlpE C-terminal OB domain 137 225 7.1E-37 T 12-10-2018 IPR033450 NlpE, C-terminal OB domain YpsIP31758_1037 71038f70e3f6eb4af97bdef0935ff4dd 227 Gene3D G3DSA:2.40.50.540 138 227 9.4E-31 T 12-10-2018 IPR038139 NlpE, C-terminal domain superfamily YpsIP31758_A0015 d8d6858a9320b6cd62252938a983a862 160 SUPERFAMILY SSF53955 42 143 1.17E-8 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 Gene3D G3DSA:3.20.20.150 1 418 5.0E-188 T 12-10-2018 YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 12-10-2018 YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 4 418 3.0E-228 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 276.914 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 7.3E-236 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 YpsIP31758_3756 751700b73a9cb3265a69a2aacbc6cfdb 418 SUPERFAMILY SSF51658 5 418 1.45E-83 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 102 7.6E-46 T 12-10-2018 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.2E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 103 191 3.5E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 12-10-2018 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 6.8E-33 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 YpsIP31758_3891 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_2888 91f022edd84d0514bd1168083523fcc9 293 Pfam PF01513 ATP-NAD kinase 9 272 6.8E-76 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YpsIP31758_2888 91f022edd84d0514bd1168083523fcc9 293 Gene3D G3DSA:2.60.200.30 129 265 1.7E-100 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YpsIP31758_2888 91f022edd84d0514bd1168083523fcc9 293 Gene3D G3DSA:3.40.50.10330 24 288 1.7E-100 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 YpsIP31758_2888 91f022edd84d0514bd1168083523fcc9 293 SUPERFAMILY SSF111331 9 290 1.7E-93 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YpsIP31758_2888 91f022edd84d0514bd1168083523fcc9 293 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.677 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 SMART SM00490 270 351 4.5E-30 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.548 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.4E-28 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 2 222 6.6E-68 T 12-10-2018 YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 227 393 1.5E-44 T 12-10-2018 YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 5.9E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 SMART SM00487 28 234 1.1E-50 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_0178 b9d105ad27256075e90badec73548846 428 SUPERFAMILY SSF52540 84 363 9.86E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0201 e631c22cfb781ccdfc236f335afe81ce 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 12-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YpsIP31758_0201 e631c22cfb781ccdfc236f335afe81ce 850 Pfam PF01295 Adenylate cyclase, class-I 228 825 1.7E-262 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YpsIP31758_0201 e631c22cfb781ccdfc236f335afe81ce 850 PIRSF PIRSF001444 1 850 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YpsIP31758_0201 e631c22cfb781ccdfc236f335afe81ce 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 12-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YpsIP31758_0201 e631c22cfb781ccdfc236f335afe81ce 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 8.2E-80 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Gene3D G3DSA:1.20.1060.30 667 778 2.0E-137 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Gene3D G3DSA:3.40.1140.10 1383 1468 2.8E-38 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Gene3D G3DSA:1.20.58.850 620 830 2.0E-137 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 SUPERFAMILY SSF52540 21 1433 2.84E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Pfam PF16330 MukB hinge domain 645 810 1.8E-73 T 12-10-2018 IPR032520 MukB, hinge domain YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Gene3D G3DSA:3.40.1140.10 1 227 5.1E-101 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.061 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.1E-14 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Pfam PF04310 MukB N-terminal 2 227 1.8E-123 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 SUPERFAMILY SSF52540 22 224 3.54E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 Gene3D G3DSA:1.20.58.850 581 852 2.0E-137 T 12-10-2018 YpsIP31758_2565 daa937dda5df6766140fe853080e7399 1485 PIRSF PIRSF005246 1 1483 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 9.4E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 SUPERFAMILY SSF52518 9 381 3.93E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 46.2 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 SMART SM00861 319 483 1.1E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 5.1E-117 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Gene3D G3DSA:3.40.50.970 316 487 1.2E-68 T 12-10-2018 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 SUPERFAMILY SSF52922 490 618 3.8E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Gene3D G3DSA:3.40.50.920 494 619 2.6E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 SUPERFAMILY SSF52518 316 503 3.84E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3112 ab997ce8b8422b2fd9dd6a3d14e6a482 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 6.4E-26 T 12-10-2018 IPR033248 Transketolase, C-terminal domain YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Gene3D G3DSA:3.40.120.10 221 318 2.4E-45 T 12-10-2018 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 9.2E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 SUPERFAMILY SSF55957 432 543 5.49E-19 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Gene3D G3DSA:3.30.310.50 443 546 3.0E-35 T 12-10-2018 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 SUPERFAMILY SSF53738 26 235 2.31E-51 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 7.6E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Gene3D G3DSA:3.40.120.10 319 442 1.5E-35 T 12-10-2018 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 6.4E-36 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Gene3D G3DSA:3.40.120.10 12 218 7.7E-77 T 12-10-2018 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 SUPERFAMILY SSF53738 305 446 6.77E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 SUPERFAMILY SSF53738 209 317 1.06E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1099 cfdd163f36e27ab9596915208cc0363e 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 538 1.4E-7 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.2E-159 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 96 144 7.2E-9 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 158 206 4.2E-9 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.3E-195 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF51412 1 477 8.37E-124 T 12-10-2018 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF54631 95 203 3.16E-25 T 12-10-2018 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 95 140 1.1E-7 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 149 202 3.1E-6 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.055 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 Gene3D G3DSA:3.20.20.70 1 486 4.7E-206 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 SMART SM01240 7 473 0.0 T 12-10-2018 YpsIP31758_1194 3d930c20dcb434140018d68f6686ba28 487 PIRSF PIRSF000130 1 487 2.7E-195 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Gene3D G3DSA:3.50.50.60 116 442 1.8E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Gene3D G3DSA:3.50.50.60 5 342 1.8E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Gene3D G3DSA:3.40.250.10 454 547 1.5E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 309 4.5E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 SUPERFAMILY SSF55424 325 447 1.36E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.4E-23 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.4E-23 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-23 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.4E-23 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.4E-23 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 SUPERFAMILY SSF51905 2 318 3.33E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Pfam PF00581 Rhodanese-like domain 460 543 2.0E-12 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.5E-17 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.5E-17 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.5E-17 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.5E-17 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 2.5E-17 T 12-10-2018 YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 SMART SM00450 453 548 8.8E-17 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 SUPERFAMILY SSF52821 432 543 3.4E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_1310 40a8ee5c118628110ed5964c402a5255 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 434 3.8E-12 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 Pfam PF00920 Dehydratase family 34 607 4.5E-216 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 SUPERFAMILY SSF143975 3 420 1.44E-132 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 Gene3D G3DSA:3.50.30.80 421 573 4.1E-55 T 12-10-2018 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.058 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 SUPERFAMILY SSF52016 421 610 4.0E-59 T 12-10-2018 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_0157 ff517cf97a1ac14b34ba107909fe1e1d 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 3.3E-261 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 SUPERFAMILY SSF158651 1 75 2.09E-31 T 12-10-2018 IPR023202 YejL-like superfamily YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 PIRSF PIRSF006188 1 72 3.7E-35 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.627 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.3E-23 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 YpsIP31758_2722 4af70e20e70c4af3a6a512a5208cafaf 75 Gene3D G3DSA:1.10.3390.10 1 75 9.3E-35 T 12-10-2018 IPR023202 YejL-like superfamily YpsIP31758_3632 5ec2aa88530d760c977224c092e09b57 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 47.619 T 12-10-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0030091 YpsIP31758_3632 5ec2aa88530d760c977224c092e09b57 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 1.4E-81 T 12-10-2018 IPR019903 Repair of iron centres family YpsIP31758_3632 5ec2aa88530d760c977224c092e09b57 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 8.0E-20 T 12-10-2018 IPR019903 Repair of iron centres family YpsIP31758_3632 5ec2aa88530d760c977224c092e09b57 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 3.2E-27 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 YpsIP31758_3632 5ec2aa88530d760c977224c092e09b57 221 Gene3D G3DSA:1.20.120.520 35 220 3.2E-30 T 12-10-2018 YpsIP31758_2562 72e2c11b3421f3a80ce7600f89cb8355 182 SUPERFAMILY SSF55166 66 182 1.07E-30 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_2562 72e2c11b3421f3a80ce7600f89cb8355 182 Gene3D G3DSA:3.30.1380.10 60 182 2.2E-11 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_2562 72e2c11b3421f3a80ce7600f89cb8355 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.4E-60 T 12-10-2018 IPR010275 Protein of unknown function DUF882 YpsIP31758_1740 7e35f613360c7915d9abdf71add3c13d 138 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 42.445 T 12-10-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 YpsIP31758_1740 7e35f613360c7915d9abdf71add3c13d 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 8.2E-46 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 YpsIP31758_1740 7e35f613360c7915d9abdf71add3c13d 138 Gene3D G3DSA:3.10.129.10 1 138 3.4E-59 T 12-10-2018 YpsIP31758_1740 7e35f613360c7915d9abdf71add3c13d 138 SUPERFAMILY SSF54637 20 136 7.47E-31 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_1740 7e35f613360c7915d9abdf71add3c13d 138 Pfam PF03061 Thioesterase superfamily 50 127 3.0E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.63 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 Pfam PF06303 MatP N-terminal domain 2 85 2.3E-44 T 12-10-2018 IPR035087 MatP, N-terminal YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 5.0E-72 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 Gene3D G3DSA:1.20.1270.380 1 89 2.8E-48 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.2E-30 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain YpsIP31758_2544 28affa95fe6763a3c9309a5ea3ef7699 151 Gene3D G3DSA:1.10.1220.10 98 150 2.1E-34 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.7E-31 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.1E-28 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 Gene3D G3DSA:3.30.1340.10 1 85 5.7E-35 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_1317 90698f324e7b2f882bc5dfbfdbc4a362 85 SUPERFAMILY SSF55594 1 82 7.59E-27 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 Pfam PF00072 Response regulator receiver domain 6 114 3.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.3E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 SUPERFAMILY SSF46894 137 234 3.12E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 SMART SM00862 156 232 2.1E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 SMART SM00448 4 114 4.7E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 SUPERFAMILY SSF52172 2 127 1.22E-36 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 Gene3D G3DSA:3.40.50.2300 1 123 4.3E-33 T 12-10-2018 YpsIP31758_3478 feae03fa980fc3674f8652862b2ae009 238 Gene3D G3DSA:1.10.10.10 124 236 9.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3464 7e5d4660011904256053c40a4df8f4db 394 Pfam PF06965 Na+/H+ antiporter 1 7 380 1.6E-150 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YpsIP31758_3464 7e5d4660011904256053c40a4df8f4db 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.624 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YpsIP31758_3464 7e5d4660011904256053c40a4df8f4db 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 2.5E-173 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YpsIP31758_3464 7e5d4660011904256053c40a4df8f4db 394 Gene3D G3DSA:1.20.1530.10 2 388 1.0E-155 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily YpsIP31758_0706 dce623d29a130e0e45ffcc37ba72e0ae 459 Pfam PF00939 Sodium:sulfate symporter transmembrane region 27 458 2.1E-53 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YpsIP31758_0706 dce623d29a130e0e45ffcc37ba72e0ae 459 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 408 424 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 YpsIP31758_0706 dce623d29a130e0e45ffcc37ba72e0ae 459 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 40 457 5.3E-113 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YpsIP31758_A0055 e9c5f67ae796266ac38ce9037fa25106 258 SUPERFAMILY SSF101082 32 228 2.35E-34 T 12-10-2018 YpsIP31758_A0055 e9c5f67ae796266ac38ce9037fa25106 258 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 11 258 8.8E-55 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:3.10.580.10 175 301 2.3E-40 T 12-10-2018 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 SMART SM00924 75 178 3.4E-31 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF03448 MgtE intracellular N domain 75 175 6.3E-23 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 63 490 1.8E-77 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF54631 177 316 1.3E-24 T 12-10-2018 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF158791 57 173 1.26E-22 T 12-10-2018 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.10.357.20 317 491 2.8E-47 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF01769 Divalent cation transporter 362 483 1.1E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF161093 319 490 1.28E-47 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.25.60.10 50 173 8.1E-16 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily YpsIP31758_1224 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF00571 CBS domain 242 296 4.9E-5 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 Gene3D G3DSA:3.30.2310.10 148 231 1.2E-22 T 12-10-2018 YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 4.0E-39 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 Gene3D G3DSA:2.40.30.70 24 147 8.9E-49 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 SUPERFAMILY SSF118196 1 230 2.88E-86 T 12-10-2018 IPR036413 YaeB-like superfamily YpsIP31758_1039 2b2e6e2d74f5e2d0d9ca8c0c5efe3e14 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 3.4E-57 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain YpsIP31758_2057 5ae857e1d2ccc3cf421e55d9f326313e 288 SUPERFAMILY SSF161098 50 272 1.57E-41 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2057 5ae857e1d2ccc3cf421e55d9f326313e 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 279 1.7E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2057 5ae857e1d2ccc3cf421e55d9f326313e 288 Gene3D G3DSA:1.10.3720.10 48 279 9.3E-37 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2759 c9c99d209f7bec9a2c1b7638f9cf5378 153 Gene3D G3DSA:3.10.450.50 9 153 1.7E-72 T 12-10-2018 YpsIP31758_2759 c9c99d209f7bec9a2c1b7638f9cf5378 153 Pfam PF07080 Protein of unknown function (DUF1348) 6 135 1.9E-63 T 12-10-2018 IPR009783 Protein of unknown function DUF1348 YpsIP31758_2759 c9c99d209f7bec9a2c1b7638f9cf5378 153 SUPERFAMILY SSF54427 2 153 2.29E-75 T 12-10-2018 IPR032710 NTF2-like domain superfamily YpsIP31758_3937 be3d38673b37e688a9848e892785cb30 255 SMART SM00382 26 215 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3937 be3d38673b37e688a9848e892785cb30 255 Pfam PF00005 ABC transporter 17 156 9.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3937 be3d38673b37e688a9848e892785cb30 255 SUPERFAMILY SSF52540 1 213 1.0E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3937 be3d38673b37e688a9848e892785cb30 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3937 be3d38673b37e688a9848e892785cb30 255 Gene3D G3DSA:3.40.50.300 1 241 2.4E-60 T 12-10-2018 YpsIP31758_0181 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0181 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0181 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0181 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2543 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2543 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2543 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2543 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0496 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0496 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0496 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0496 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3224 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3224 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3224 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3224 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3413 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3413 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3413 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3413 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3858 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3858 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3858 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3858 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1725 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1725 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1725 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1725 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1673 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1673 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1673 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1673 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3905 905bf96b6b17acf31b95af7cced1ceaa 169 SUPERFAMILY SSF143422 18 146 1.44E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3905 905bf96b6b17acf31b95af7cced1ceaa 169 Gene3D G3DSA:3.30.70.1290 20 153 1.2E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3905 905bf96b6b17acf31b95af7cced1ceaa 169 Pfam PF01797 Transposase IS200 like 29 146 5.6E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3905 905bf96b6b17acf31b95af7cced1ceaa 169 SMART SM01321 28 146 2.7E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:1.10.3130.10 1 142 3.0E-52 T 12-10-2018 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 SMART SM00971 9 113 1.4E-59 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 3.3E-37 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.6E-73 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 SUPERFAMILY SSF51161 8 260 8.32E-67 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:2.160.10.10 143 273 2.8E-38 T 12-10-2018 YpsIP31758_0080 5b37906d5268982dce2c52f3a6f72404 273 PIRSF PIRSF000441 75 264 1.8E-59 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 Pfam PF02357 Transcription termination factor nusG 2 95 1.6E-17 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 SMART SM00739 109 136 4.4E-4 T 12-10-2018 IPR005824 KOW YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 2.4E-58 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 Gene3D G3DSA:3.30.70.940 1 162 4.7E-55 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 SMART SM00738 1 100 7.7E-32 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 SUPERFAMILY SSF82679 1 98 2.22E-26 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_0279 4e4ca19de7554aedd5499657ef4a7c13 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.314 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 Gene3D G3DSA:3.20.20.140 1 242 1.1E-5 T 12-10-2018 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 Pfam PF07969 Amidohydrolase family 233 366 9.8E-11 T 12-10-2018 IPR013108 Amidohydrolase 3 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 SUPERFAMILY SSF51338 2 377 9.5E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 PIRSF PIRSF038971 1 378 3.1E-152 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 SUPERFAMILY SSF51556 50 345 1.62E-19 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 Gene3D G3DSA:3.20.20.140 313 341 4.0E-8 T 12-10-2018 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 Gene3D G3DSA:2.30.40.10 342 365 4.0E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_3566 e1a12ef51b0b0788ceeae89c16fb0772 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 9.2E-150 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Pfam PF05127 Helicase 195 340 6.6E-38 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Gene3D G3DSA:1.20.120.890 544 682 8.7E-51 T 12-10-2018 IPR038321 TmcA, C-terminal domain superfamily YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Gene3D G3DSA:3.40.50.11040 3 190 4.3E-66 T 12-10-2018 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Pfam PF17176 tRNA-binding domain 549 669 1.3E-43 T 12-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Pfam PF08351 Domain of unknown function (DUF1726) 65 147 2.9E-6 T 12-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Gene3D G3DSA:3.40.630.30 333 543 8.4E-71 T 12-10-2018 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 SUPERFAMILY SSF55729 358 526 2.24E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 SUPERFAMILY SSF52540 171 287 7.58E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Pfam PF13718 GNAT acetyltransferase 2 380 488 2.1E-11 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Pfam PF13718 GNAT acetyltransferase 2 490 545 3.6E-8 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Gene3D G3DSA:3.40.50.12320 191 331 1.8E-48 T 12-10-2018 YpsIP31758_1252 586a622c09954b7fa2f214647b210955 683 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 668 50.405 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 YpsIP31758_4169 a8bc294f0dff843a7edd47fc02816206 295 SUPERFAMILY SSF161098 31 286 7.85E-34 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4169 a8bc294f0dff843a7edd47fc02816206 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 1.5E-84 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YpsIP31758_4169 a8bc294f0dff843a7edd47fc02816206 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.3E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4169 a8bc294f0dff843a7edd47fc02816206 295 Gene3D G3DSA:1.10.3720.10 14 287 8.8E-29 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Gene3D G3DSA:3.90.640.10 266 339 3.7E-103 T 12-10-2018 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 SUPERFAMILY SSF100934 532 643 5.69E-37 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 357 373 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 239 249 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 388 408 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 413 432 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 180 200 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 PRINTS PR00301 70kDa heat shock protein signature 494 510 1.6E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Pfam PF00012 Hsp70 protein 73 628 4.7E-186 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 644 44.313 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 SUPERFAMILY SSF53067 228 405 5.26E-51 T 12-10-2018 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 233 246 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 SUPERFAMILY SSF53067 20 224 4.86E-47 T 12-10-2018 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Gene3D G3DSA:3.30.420.40 72 402 3.7E-103 T 12-10-2018 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 SUPERFAMILY SSF100920 412 561 5.23E-51 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 360 374 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Gene3D G3DSA:1.20.1270.10 549 643 2.1E-28 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 70 643 2.3E-258 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Gene3D G3DSA:2.60.34.10 407 548 1.4E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YpsIP31758_1172 4d511f13c51b051964b140861c2fd587 644 Gene3D G3DSA:3.30.420.40 222 389 3.7E-103 T 12-10-2018 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.636 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 Pfam PF05746 DALR anticodon binding domain 582 679 4.1E-8 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 SUPERFAMILY SSF109604 339 536 1.67E-15 T 12-10-2018 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 2.7E-212 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4130 1dec0e821a30cc058442d229c91793bc 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 Gene3D G3DSA:3.40.50.150 101 293 4.4E-56 T 12-10-2018 YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 SUPERFAMILY SSF53335 43 287 2.79E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.471 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.3E-117 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 4.3E-100 T 12-10-2018 YpsIP31758_0388 20d27a4004e1aec9ae59c5462d02143e 293 PIRSF PIRSF000401 1 293 8.8E-90 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YpsIP31758_2792 4acb39fd33916d92d9e43a2d6571e348 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 5.9E-130 T 12-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC YpsIP31758_2792 4acb39fd33916d92d9e43a2d6571e348 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 8.3E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 3.0E-108 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 2.3E-30 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.3E-30 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.3E-30 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 2.3E-30 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 PIRSF PIRSF002888 2 330 1.1E-93 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 Gene3D G3DSA:3.40.1550.10 43 232 6.0E-56 T 12-10-2018 IPR028976 CheC-like superfamily YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 9.0E-15 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 SUPERFAMILY SSF101801 249 322 2.09E-11 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 Pfam PF02154 Flagellar motor switch protein FliM 37 230 3.0E-74 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YpsIP31758_2299 ffb9487d3681490b7bbe554c3a9be160 333 SUPERFAMILY SSF103039 48 230 9.94E-20 T 12-10-2018 IPR028976 CheC-like superfamily YpsIP31758_0018 a9b974e1e7afc839dc87cdf4f8cd8d10 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 8.4E-46 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 YpsIP31758_0018 a9b974e1e7afc839dc87cdf4f8cd8d10 89 Gene3D G3DSA:1.10.1580.20 1 89 3.4E-46 T 12-10-2018 IPR038134 YihD-like superfamily YpsIP31758_0018 a9b974e1e7afc839dc87cdf4f8cd8d10 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 6.0E-46 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.269 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.40.50.720 1 112 2.6E-30 T 12-10-2018 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.30.160.110 113 148 6.7E-20 T 12-10-2018 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 5.3E-20 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 8.4E-71 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF51735 1 112 1.54E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 3.0E-49 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:1.10.8.210 149 213 2.4E-27 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Pfam PF13241 Putative NAD(P)-binding 6 115 8.9E-24 T 12-10-2018 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF75615 114 203 3.92E-27 T 12-10-2018 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.30.950.10 332 457 4.5E-46 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Gene3D G3DSA:3.40.1010.10 215 331 9.9E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 1.1E-8 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 PIRSF PIRSF036426 1 465 2.8E-202 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 2.7E-91 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3959 17ee5b65693c33a916247d83176279ab 473 SUPERFAMILY SSF53790 215 460 1.7E-79 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 62 1.7E-19 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PIRSF PIRSF000410 1 270 1.3E-98 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 SUPERFAMILY SSF47757 3 76 1.44E-24 T 12-10-2018 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 3.8E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 Gene3D G3DSA:1.10.155.10 1 75 4.0E-31 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 264 2.3E-58 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 SUPERFAMILY SSF53335 77 266 6.91E-59 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 SMART SM00138 9 269 4.6E-114 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YpsIP31758_1644 d59749615ffaee4ca1e148c782577ddf 272 Gene3D G3DSA:3.40.50.150 76 269 4.9E-71 T 12-10-2018 YpsIP31758_0976 31d25d69b71ca753a7d3f8fe136040e1 406 Gene3D G3DSA:1.20.1250.20 9 393 3.7E-25 T 12-10-2018 YpsIP31758_0976 31d25d69b71ca753a7d3f8fe136040e1 406 SUPERFAMILY SSF103473 14 401 1.57E-27 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0976 31d25d69b71ca753a7d3f8fe136040e1 406 Pfam PF07690 Major Facilitator Superfamily 19 343 4.5E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0976 31d25d69b71ca753a7d3f8fe136040e1 406 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 44.294 T 12-10-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 Pfam PF00005 ABC transporter 21 162 3.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 SMART SM00382 29 217 2.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF52540 6 247 1.25E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.140 295 357 7.5E-24 T 12-10-2018 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.940 228 366 7.5E-24 T 12-10-2018 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:3.40.50.300 4 227 3.0E-60 T 12-10-2018 YpsIP31758_1689 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF50331 243 373 8.02E-21 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 SUPERFAMILY SSF56712 4 622 8.89E-150 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Gene3D G3DSA:1.10.290.10 287 421 2.3E-141 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 407 423 1.9E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.9E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 1.9E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 1.9E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.9E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Pfam PF01131 DNA topoisomerase 153 608 5.2E-102 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Gene3D G3DSA:2.70.20.10 215 490 2.3E-141 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 SMART SM00437 278 570 2.6E-54 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Gene3D G3DSA:3.40.50.140 4 152 7.1E-42 T 12-10-2018 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 SMART SM00493 4 125 6.8E-9 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Pfam PF01751 Toprim domain 6 132 2.9E-9 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Pfam PF13342 C-terminal repeat of topoisomerase 755 814 1.3E-11 T 12-10-2018 IPR025589 Topoisomerase C-terminal repeat YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 Gene3D G3DSA:1.10.460.10 159 618 2.3E-141 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YpsIP31758_B0033 914356ecd470bdbacea4873a09169586 815 SMART SM00436 125 221 7.3E-25 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Pfam PF05954 Phage late control gene D protein (GPD) 34 354 1.4E-65 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 515 8.5E-74 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Gene3D G3DSA:3.55.50.10 112 208 2.0E-58 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 SUPERFAMILY SSF69255 382 472 7.32E-26 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 SUPERFAMILY SSF69279 23 203 7.94E-49 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 2.7E-35 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 6.8E-182 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 2.5E-51 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 SUPERFAMILY SSF69279 204 383 2.72E-50 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Gene3D G3DSA:3.30.1920.30 241 312 2.0E-58 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Gene3D G3DSA:2.30.110.50 28 346 2.0E-58 T 12-10-2018 YpsIP31758_0785 01202352f57d04445df18e2e84ccf82f 832 Gene3D G3DSA:2.40.50.230 388 471 2.2E-34 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 4.0E-30 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 SUPERFAMILY SSF52374 3 647 2.25E-136 T 12-10-2018 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Gene3D G3DSA:1.10.730.20 640 929 2.8E-94 T 12-10-2018 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 SUPERFAMILY SSF47323 652 929 2.24E-79 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Gene3D G3DSA:3.40.50.620 25 629 2.1E-230 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 SUPERFAMILY SSF50677 204 403 6.15E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Gene3D G3DSA:3.90.740.10 195 408 2.1E-230 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 3.6E-222 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 7.2E-10 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.377 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 5.3E-298 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.1E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.1E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.1E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3460 69f527dbc80340040e132ad1dab6743c 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.1E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 SUPERFAMILY SSF52540 7 258 1.25E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 PIRSF PIRSF037116 1 262 2.2E-141 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 8 260 3.4E-119 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 Pfam PF00005 ABC transporter 27 183 4.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 Gene3D G3DSA:3.40.50.300 8 262 8.2E-68 T 12-10-2018 YpsIP31758_3564 486f767c1a1a2621a5d1300fca42fd6a 262 SMART SM00382 35 233 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2343 602f1f560b63794d563a2da21eb67472 76 SUPERFAMILY SSF46575 1 76 9.94E-36 T 12-10-2018 YpsIP31758_2343 602f1f560b63794d563a2da21eb67472 76 Gene3D G3DSA:1.20.58.250 1 76 8.1E-36 T 12-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2343 602f1f560b63794d563a2da21eb67472 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 6.0E-36 T 12-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2343 602f1f560b63794d563a2da21eb67472 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 6.2E-38 T 12-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 6.1E-123 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 Gene3D G3DSA:3.40.50.300 2 241 4.7E-72 T 12-10-2018 YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 Pfam PF00005 ABC transporter 20 166 5.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 SUPERFAMILY SSF52540 4 236 3.24E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.8E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YpsIP31758_0442 57621bb28eac9587646224a967476fc1 241 SMART SM00382 28 231 2.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3578 f0e8f77e8c869b1f44ab5591feb6a0c4 95 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 33.469 T 12-10-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YpsIP31758_3578 f0e8f77e8c869b1f44ab5591feb6a0c4 95 Gene3D G3DSA:3.40.1440.10 2 92 3.2E-28 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YpsIP31758_3578 f0e8f77e8c869b1f44ab5591feb6a0c4 95 SUPERFAMILY SSF82771 5 76 6.41E-12 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YpsIP31758_3578 f0e8f77e8c869b1f44ab5591feb6a0c4 95 Pfam PF01541 GIY-YIG catalytic domain 6 77 1.5E-12 T 12-10-2018 IPR000305 GIY-YIG endonuclease YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 1.8E-15 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 1.8E-15 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 1.8E-15 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 Pfam PF00119 ATP synthase A chain 50 268 1.9E-54 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 SUPERFAMILY SSF81336 98 268 9.55E-49 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 Gene3D G3DSA:1.20.120.220 98 274 2.0E-69 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.972 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4182 e339b83b8cbf52b62b3cb4651fe72520 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 269 1.6E-43 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.1E-300 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.814 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.5E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 399 493 2.11E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.2570 479 553 6.1E-34 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 292 370 3.02E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:2.40.30.10 186 285 5.6E-34 T 12-10-2018 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 6.8E-17 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF52540 2 234 1.32E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.1E-11 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.870 286 367 2.3E-35 T 12-10-2018 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00679 Elongation factor G C-terminus 399 482 7.1E-20 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.40.50.300 1 185 2.3E-70 T 12-10-2018 YpsIP31758_1134 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.3380 368 478 3.6E-40 T 12-10-2018 YpsIP31758_2944 590bd574105638bdfa472988d971c2f8 172 SUPERFAMILY SSF141571 25 90 1.96E-23 T 12-10-2018 YpsIP31758_2944 590bd574105638bdfa472988d971c2f8 172 Pfam PF00805 Pentapeptide repeats (8 copies) 27 65 1.6E-13 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_2944 590bd574105638bdfa472988d971c2f8 172 Gene3D G3DSA:2.160.20.80 3 107 9.0E-28 T 12-10-2018 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.728 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 SUPERFAMILY SSF51735 4 162 3.44E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 SUPERFAMILY SSF48179 163 271 3.74E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 2.4E-18 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 Gene3D G3DSA:3.40.50.720 2 165 8.7E-49 T 12-10-2018 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 Gene3D G3DSA:1.10.3730.10 166 273 3.1E-33 T 12-10-2018 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 2.8E-29 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 PIRSF PIRSF000193 3 271 1.2E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YpsIP31758_0829 bc69a535db4c5de63395e45564819eba 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 3.5E-70 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YpsIP31758_2027 354dd2ca3e9a889d232e83164216275f 318 Gene3D G3DSA:3.40.50.1980 29 205 7.9E-56 T 12-10-2018 YpsIP31758_2027 354dd2ca3e9a889d232e83164216275f 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 1.3E-56 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YpsIP31758_2027 354dd2ca3e9a889d232e83164216275f 318 Gene3D G3DSA:3.40.50.1980 207 318 2.0E-41 T 12-10-2018 YpsIP31758_2027 354dd2ca3e9a889d232e83164216275f 318 SUPERFAMILY SSF53807 29 318 7.36E-78 T 12-10-2018 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 Gene3D G3DSA:3.20.20.70 2 245 4.9E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.776 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 SMART SM00934 16 237 1.7E-102 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 SUPERFAMILY SSF51366 14 240 6.65E-81 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 2.7E-53 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_1913 543b6cd0230dec3a2d1eb0416911475b 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 237 1.9E-56 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1430 49 811 4.8E-294 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1320 144 335 4.8E-294 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.1E-81 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 49 142 4.71E-23 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 34.895 T 12-10-2018 IPR022831 Multidrug resistance protein MdtB YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1440 663 861 4.8E-294 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:1.20.1640.10 19 512 4.8E-294 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.2090.10 188 278 4.8E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.70.1430 567 662 4.8E-294 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82866 299 498 3.14E-46 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 146 333 1.1E-19 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82693 565 662 1.92E-16 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:3.30.2090.10 715 803 4.8E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82866 799 1025 9.55E-47 T 12-10-2018 YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82714 192 275 3.27E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 SUPERFAMILY SSF82714 719 802 6.54E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1214 36c85a42831d349cab6839c88f6c7b12 1052 Gene3D G3DSA:1.20.1640.10 513 1019 4.8E-294 T 12-10-2018 YpsIP31758_1696 c3a95a4e625b553241366d2835450f61 110 PIRSF PIRSF029883 3 110 1.7E-29 T 12-10-2018 IPR025499 Pectin degradation protein KdgF YpsIP31758_1696 c3a95a4e625b553241366d2835450f61 110 Gene3D G3DSA:2.60.120.10 1 110 1.4E-33 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1696 c3a95a4e625b553241366d2835450f61 110 SUPERFAMILY SSF51182 8 109 2.97E-18 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_1696 c3a95a4e625b553241366d2835450f61 110 Pfam PF07883 Cupin domain 35 92 1.5E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel YpsIP31758_0805 94a44ac8904567e4c1bd7c7344909c1f 465 Pfam PF12486 Type VI secretion system, EvfB, or VasL 313 458 3.5E-51 T 12-10-2018 IPR021069 ImpA, C-terminal YpsIP31758_0805 94a44ac8904567e4c1bd7c7344909c1f 465 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 112 4.5E-20 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Gene3D G3DSA:3.30.450.330 236 549 6.3E-111 T 12-10-2018 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.5E-80 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Gene3D G3DSA:3.40.710.10 295 475 6.3E-111 T 12-10-2018 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 2.5E-18 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Gene3D G3DSA:3.90.1310.30 58 234 3.9E-44 T 12-10-2018 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 569 46.149 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 SUPERFAMILY SSF56519 62 233 4.97E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 YpsIP31758_3393 646ca88d4c469fd95c79ece0e8cab0f0 587 SUPERFAMILY SSF56601 234 562 1.18E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 SMART SM00478 38 185 1.4E-54 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.1670.10 11 203 8.1E-79 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.7E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.340.30 21 132 8.1E-79 T 12-10-2018 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.265 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 SUPERFAMILY SSF48150 2 207 8.01E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.0E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 PIRSF PIRSF001435 1 211 6.1E-52 T 12-10-2018 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.4E-88 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 YpsIP31758_1901 7dc742e021525d1baa49877e6b771802 213 SMART SM00525 186 206 4.4E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 SUPERFAMILY SSF103473 18 488 4.71E-28 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 490 51.957 T 12-10-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0016020|GO:1904680 YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 486 1.1E-137 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Pfam PF00854 POT family 89 445 6.8E-88 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 YpsIP31758_1778 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Gene3D G3DSA:1.20.1250.20 11 487 3.9E-111 T 12-10-2018 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 SUPERFAMILY SSF46894 124 222 1.81E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 Gene3D G3DSA:1.10.10.10 124 230 1.8E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 SMART SM00862 146 221 3.5E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.8E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 6.6E-90 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 SUPERFAMILY SSF52172 1 119 3.56E-37 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 SMART SM00448 1 111 1.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2084 2422b2695a9d46cce51e2e5bb9ed5e8f 230 Gene3D G3DSA:3.40.50.2300 1 121 8.2E-37 T 12-10-2018 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 PIRSF PIRSF004486 8 319 1.8E-100 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF53335 14 318 1.14E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 318 38.391 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF81799 121 220 2.49E-34 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:3.40.50.150 17 317 6.4E-107 T 12-10-2018 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:1.10.150.170 119 221 6.4E-107 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 317 5.1E-126 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YpsIP31758_3395 e3c80e7bfe426df4c6f63d87d75c58e1 320 Pfam PF01795 MraW methylase family 12 317 1.9E-116 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:3.30.1360.10 17 228 2.8E-86 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 SMART SM00662 23 234 8.0E-106 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 3.9E-113 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 12-10-2018 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.3E-23 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:2.170.120.12 53 177 2.8E-86 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 12-10-2018 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.661 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3890 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF56553 53 178 1.17E-41 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Pfam PF00577 Outer membrane usher protein 187 740 2.7E-169 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Gene3D G3DSA:2.60.40.2610 656 745 7.7E-11 T 12-10-2018 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Gene3D G3DSA:3.10.20.410 25 147 4.4E-23 T 12-10-2018 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Pfam PF13954 PapC N-terminal domain 27 170 6.9E-40 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 SUPERFAMILY SSF141729 25 145 3.4E-31 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Gene3D G3DSA:2.60.40.3110 262 350 2.1E-30 T 12-10-2018 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Gene3D G3DSA:2.60.40.2070 749 824 9.4E-27 T 12-10-2018 YpsIP31758_0614 2620e5881b83ea0803f498bd4382e1a1 826 Pfam PF13953 PapC C-terminal domain 750 807 4.3E-11 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_2100 1ada0d074ca0c08a8071e307ce11ea58 395 Gene3D G3DSA:3.40.50.2000 15 257 1.3E-22 T 12-10-2018 YpsIP31758_2100 1ada0d074ca0c08a8071e307ce11ea58 395 Gene3D G3DSA:3.40.50.2000 258 395 3.7E-21 T 12-10-2018 YpsIP31758_2100 1ada0d074ca0c08a8071e307ce11ea58 395 SUPERFAMILY SSF53756 16 377 9.11E-54 T 12-10-2018 YpsIP31758_2100 1ada0d074ca0c08a8071e307ce11ea58 395 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 266 374 4.9E-5 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 YpsIP31758_2575 9d524e2ad0d125dfdb3856c10f7a7208 478 Gene3D G3DSA:3.10.180.80 4 461 7.4E-186 T 12-10-2018 YpsIP31758_2575 9d524e2ad0d125dfdb3856c10f7a7208 478 SMART SM01150 13 424 9.4E-227 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 YpsIP31758_2575 9d524e2ad0d125dfdb3856c10f7a7208 478 Pfam PF07063 Domain of unknown function (DUF1338) 11 424 3.0E-117 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 Pfam PF01207 Dihydrouridine synthase (Dus) 24 323 3.3E-94 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 335 3.8E-161 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 Gene3D G3DSA:1.20.120.1460 267 341 1.1E-21 T 12-10-2018 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 SUPERFAMILY SSF51395 21 333 6.11E-71 T 12-10-2018 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 PIRSF PIRSF006621 10 332 6.1E-71 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 337 52.83 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YpsIP31758_3768 992aede1d399f6b511013773375af5ba 345 Gene3D G3DSA:3.20.20.70 19 260 5.2E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 SUPERFAMILY SSF51735 1 147 2.76E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 SUPERFAMILY SSF55347 134 354 4.05E-79 T 12-10-2018 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 6.9E-212 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 Gene3D G3DSA:3.30.360.10 135 350 7.7E-151 T 12-10-2018 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 SMART SM00859 3 122 2.9E-24 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.9E-58 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 Gene3D G3DSA:3.40.50.720 4 356 7.7E-151 T 12-10-2018 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.846 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.7E-23 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_4013 22b02cdb24a46709ac3182db1772debe 367 PIRSF PIRSF000148 1 367 2.6E-69 T 12-10-2018 YpsIP31758_3939 2f16dd88e834b348af7d922a63c95801 200 Pfam PF01810 LysE type translocator 16 178 5.5E-15 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.20.20.80 2 399 1.8E-142 T 12-10-2018 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08533 Beta-galactosidase C-terminal domain 626 682 1.2E-15 T 12-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:2.60.40.1180 624 686 9.4E-19 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 5.7E-79 T 12-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF02449 Beta-galactosidase 19 392 3.6E-159 T 12-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 PIRSF PIRSF001084 6 684 6.1E-249 T 12-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.40.50.880 400 623 5.3E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF51445 13 372 6.02E-119 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0918 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF52317 400 615 5.04E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 Pfam PF08402 TOBE domain 280 356 1.1E-15 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 SMART SM00382 30 212 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 SUPERFAMILY SSF50331 238 355 4.02E-13 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 Pfam PF00005 ABC transporter 21 163 8.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 Gene3D G3DSA:2.40.50.140 287 348 4.2E-10 T 12-10-2018 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 353 3.2E-110 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 Gene3D G3DSA:3.40.50.300 4 223 4.7E-66 T 12-10-2018 YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 SUPERFAMILY SSF52540 5 242 2.59E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1216 fff6a5bf5f08ef08478974708d60e02a 361 Gene3D G3DSA:2.40.50.940 224 351 4.2E-10 T 12-10-2018 YpsIP31758_2871 ae7e45946dbc6ca4f186dcc7e90f104b 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.381 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 YpsIP31758_2871 ae7e45946dbc6ca4f186dcc7e90f104b 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 7.6E-42 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YpsIP31758_2871 ae7e45946dbc6ca4f186dcc7e90f104b 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 6.2E-94 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 YpsIP31758_0721 299fa75be9dcaa0bc702874c11944895 216 Pfam PF02517 CAAX protease self-immunity 114 206 6.7E-19 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 YpsIP31758_3048 64f24c9928614ffba0826f97b5a51e30 285 Gene3D G3DSA:3.40.50.720 3 215 1.8E-32 T 12-10-2018 YpsIP31758_3048 64f24c9928614ffba0826f97b5a51e30 285 SUPERFAMILY SSF51735 1 283 4.89E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3048 64f24c9928614ffba0826f97b5a51e30 285 Gene3D G3DSA:3.90.25.10 153 280 1.8E-32 T 12-10-2018 YpsIP31758_3048 64f24c9928614ffba0826f97b5a51e30 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.9E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 SUPERFAMILY SSF52540 8 205 3.7E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.293 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 4.2E-96 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-38 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 Gene3D G3DSA:3.40.50.300 4 213 6.9E-62 T 12-10-2018 YpsIP31758_2453 e6bba29fee2a35bf44b65ae7f0af004f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.6E-43 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.2E-6 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM01086 335 434 4.5E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM00382 49 332 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.7E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 2.2E-41 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.60 335 440 4.4E-42 T 12-10-2018 YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SUPERFAMILY SSF52540 3 441 1.1E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.4E-231 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YpsIP31758_0112 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.688 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 1.3E-113 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF49503 124 282 7.71E-53 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 5.2E-20 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 PIRSF PIRSF000292 1 314 5.9E-130 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:1.10.287.90 28 112 3.6E-32 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:2.60.40.420 113 283 3.7E-59 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_3098 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF81464 18 116 4.58E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3152 87764000f0484f305f802da25e3cbb9c 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 7.4E-225 T 12-10-2018 IPR010520 UPF0255 family YpsIP31758_3152 87764000f0484f305f802da25e3cbb9c 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 60.768 T 12-10-2018 IPR010520 UPF0255 family YpsIP31758_3152 87764000f0484f305f802da25e3cbb9c 415 SUPERFAMILY SSF53474 46 412 3.24E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3152 87764000f0484f305f802da25e3cbb9c 415 Gene3D G3DSA:3.40.50.1820 16 414 1.2E-110 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3302 e6bc7bd273477349c08dead4c866f613 213 SUPERFAMILY SSF52540 36 203 4.93E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3302 e6bc7bd273477349c08dead4c866f613 213 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 22 205 1.5E-85 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YpsIP31758_3302 e6bc7bd273477349c08dead4c866f613 213 Pfam PF01583 Adenylylsulphate kinase 39 191 1.2E-71 T 12-10-2018 YpsIP31758_3302 e6bc7bd273477349c08dead4c866f613 213 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 38 209 37.901 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YpsIP31758_3302 e6bc7bd273477349c08dead4c866f613 213 Gene3D G3DSA:3.40.50.300 17 213 1.3E-77 T 12-10-2018 YpsIP31758_2246 f812b877b278fbf9c02208326203c1ed 154 Gene3D G3DSA:1.10.3600.10 2 125 4.6E-25 T 12-10-2018 IPR037042 Putative bacterial toxin ydaT superfamily YpsIP31758_2246 f812b877b278fbf9c02208326203c1ed 154 Pfam PF06254 Putative bacterial toxin ydaT 58 138 1.2E-24 T 12-10-2018 IPR009364 Putative bacterial toxin ydaT YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 Gene3D G3DSA:3.30.700.10 22 137 1.1E-36 T 12-10-2018 YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 SUPERFAMILY SSF54523 35 138 2.56E-36 T 12-10-2018 YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 1.8E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 6.9E-36 T 12-10-2018 IPR013545 Type II secretion system protein G YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 8.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 8.0E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 8.0E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0956 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 137 1.8E-60 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YpsIP31758_2036 c5d3361cbd7a508d3d480a6df30a353d 271 Gene3D G3DSA:3.20.20.410 1 258 2.7E-39 T 12-10-2018 IPR036520 UPF0759 superfamily YpsIP31758_2036 c5d3361cbd7a508d3d480a6df30a353d 271 SUPERFAMILY SSF117396 2 251 5.36E-66 T 12-10-2018 IPR036520 UPF0759 superfamily YpsIP31758_2036 c5d3361cbd7a508d3d480a6df30a353d 271 Pfam PF01904 Protein of unknown function DUF72 20 248 3.3E-51 T 12-10-2018 IPR002763 Protein of unknown function DUF72 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 Pfam PF02610 L-arabinose isomerase 5 359 5.0E-178 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-169 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.751 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 SUPERFAMILY SSF53743 1 326 2.22E-124 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 SUPERFAMILY SSF50443 329 498 1.96E-71 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 Gene3D G3DSA:3.40.50.10940 1 175 1.1E-88 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.4E-46 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 YpsIP31758_1887 a2c74158de24f362a7775c460c81b87f 500 PIRSF PIRSF001478 1 500 2.3E-259 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 YpsIP31758_3653 287688b229177e55911b4c10816a0f22 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 12-10-2018 IPR010920 LSM domain superfamily YpsIP31758_3653 287688b229177e55911b4c10816a0f22 101 Pfam PF17209 Hfq protein 7 69 7.8E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YpsIP31758_3653 287688b229177e55911b4c10816a0f22 101 Gene3D G3DSA:2.30.30.100 1 72 1.5E-34 T 12-10-2018 YpsIP31758_3653 287688b229177e55911b4c10816a0f22 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YpsIP31758_3653 287688b229177e55911b4c10816a0f22 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 222 642 4.63E-141 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00773 RNB domain 260 587 5.2E-106 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 645 725 8.01E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SMART SM00955 260 588 8.3E-183 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SMART SM00357 86 145 2.7E-16 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00575 S1 RNA binding domain 642 724 1.2E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Gene3D G3DSA:2.40.50.140 73 148 1.4E-16 T 12-10-2018 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 3.5E-270 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 643 726 3.4E-12 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 80 142 12.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.155 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 67 145 3.82E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.2E-16 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08206 Ribonuclease B OB domain 87 144 3.8E-22 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 Gene3D G3DSA:2.40.50.140 646 752 8.0E-23 T 12-10-2018 YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 138 236 3.62E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3646 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 4.7E-276 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 Gene3D G3DSA:1.20.1640.10 110 311 1.2E-15 T 12-10-2018 YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 SUPERFAMILY SSF82866 79 302 3.53E-42 T 12-10-2018 YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.361 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF02355 Protein export membrane protein 117 300 1.9E-71 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF07549 SecD/SecF GG Motif 40 66 1.1E-10 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 288 7.8E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3120 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 1.6E-88 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YpsIP31758_1040 18c0b35e96b10ae902fa39657e505a34 135 Gene3D G3DSA:3.30.110.70 31 135 5.9E-38 T 12-10-2018 YpsIP31758_1040 18c0b35e96b10ae902fa39657e505a34 135 Pfam PF16358 RcsF lipoprotein 39 133 9.0E-53 T 12-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YpsIP31758_1040 18c0b35e96b10ae902fa39657e505a34 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 36.594 T 12-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:3.40.50.300 438 651 2.6E-78 T 12-10-2018 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 342 1.1E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF52540 436 747 1.02E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF52540 168 426 8.72E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SUPERFAMILY SSF81923 1 141 3.92E-58 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.1780.10 1 143 7.4E-45 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM01086 652 743 9.2E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM00382 486 653 4.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 SMART SM00382 205 351 4.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.8E-14 T 12-10-2018 IPR004176 Clp, N-terminal YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 2.8E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.8.60 652 757 8.4E-36 T 12-10-2018 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 646 1.5E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:1.10.8.60 351 437 1.8E-35 T 12-10-2018 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 Gene3D G3DSA:3.40.50.300 155 349 3.2E-63 T 12-10-2018 YpsIP31758_2606 a307f01ec5c699fe161db1af1a475e7f 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF53155 7 92 3.18E-6 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.6E-37 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 42.314 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 Gene3D G3DSA:1.10.10.10 86 169 8.3E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 8.2E-12 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF46767 86 169 3.92E-34 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 YpsIP31758_1834 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.5E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 3.8E-43 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.6E-42 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1077 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 3.9E-48 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1338 c12a61c4aba62af834d5190029c06917 133 PIRSF PIRSF020555 12 133 1.6E-57 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats YpsIP31758_1338 c12a61c4aba62af834d5190029c06917 133 Pfam PF16068 Domain of unknown function (DUF4810) 41 124 3.0E-34 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats YpsIP31758_4091 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.1980 45 304 5.3E-91 T 12-10-2018 YpsIP31758_4091 58caa5f414df1cdfff0210e65aabd45a 317 SUPERFAMILY SSF53807 30 296 2.28E-65 T 12-10-2018 YpsIP31758_4091 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.12260 182 287 5.3E-91 T 12-10-2018 YpsIP31758_4091 58caa5f414df1cdfff0210e65aabd45a 317 Pfam PF01497 Periplasmic binding protein 52 287 4.0E-31 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.2090.10 179 276 7.7E-301 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:1.20.1640.10 8 511 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82866 826 1021 6.54E-46 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82714 717 803 1.7E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82693 38 131 1.96E-26 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.70.1440 664 861 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.2090.10 716 804 7.7E-301 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:1.20.1640.10 512 1018 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82714 183 273 4.45E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82866 297 499 5.49E-45 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82693 667 852 4.45E-25 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82693 136 331 9.07E-23 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.70.1320 133 333 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.70.1430 566 663 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 Gene3D G3DSA:3.30.70.1430 38 812 7.7E-301 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 SUPERFAMILY SSF82693 564 666 3.66E-27 T 12-10-2018 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0668 7c09ea18616f519de3d3b24c296b3000 1039 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.4E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 SUPERFAMILY SSF54373 295 477 4.81E-62 T 12-10-2018 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 PIRSF PIRSF000137 1 542 3.2E-141 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 61.578 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Gene3D G3DSA:1.10.1220.110 97 151 2.6E-178 T 12-10-2018 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Gene3D G3DSA:3.50.50.60 2 531 2.6E-178 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 SUPERFAMILY SSF51905 1 535 1.07E-90 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Gene3D G3DSA:3.30.410.40 152 474 2.6E-178 T 12-10-2018 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Pfam PF00732 GMC oxidoreductase 3 300 4.2E-98 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Gene3D G3DSA:4.10.450.10 36 199 2.6E-178 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 Pfam PF05199 GMC oxidoreductase 393 527 4.9E-42 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 3.6E-282 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 YpsIP31758_2831 37685a620e648cfb37efc6e37bec9495 567 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 YpsIP31758_1535 5db8b8b1fb7cefc7d294210ff6708c3e 326 Gene3D G3DSA:1.20.120.920 115 324 1.8E-64 T 12-10-2018 YpsIP31758_1535 5db8b8b1fb7cefc7d294210ff6708c3e 326 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 13 318 1.4E-164 T 12-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 YpsIP31758_1535 5db8b8b1fb7cefc7d294210ff6708c3e 326 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 20 324 7.9E-79 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 YpsIP31758_1535 5db8b8b1fb7cefc7d294210ff6708c3e 326 Pfam PF01867 CRISPR associated protein Cas1 38 276 1.6E-9 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 YpsIP31758_1535 5db8b8b1fb7cefc7d294210ff6708c3e 326 Gene3D G3DSA:3.100.10.20 12 114 7.7E-49 T 12-10-2018 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 SUPERFAMILY SSF141734 5 122 1.15E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 1.0E-25 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 4.0E-31 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Gene3D G3DSA:3.10.20.400 3 97 1.4E-34 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Gene3D G3DSA:1.10.287.1080 112 204 6.0E-28 T 12-10-2018 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 8.0E-16 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 9.3E-30 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.275 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.686 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 YpsIP31758_2435 941fba5b323b033c44066ee42b2ea1df 204 SUPERFAMILY SSF101386 114 202 2.4E-23 T 12-10-2018 YpsIP31758_0382 b960ea3e2cb68a3bd4b43b8481447e32 454 Gene3D G3DSA:1.20.1250.20 27 453 4.6E-47 T 12-10-2018 YpsIP31758_0382 b960ea3e2cb68a3bd4b43b8481447e32 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_0382 b960ea3e2cb68a3bd4b43b8481447e32 454 Pfam PF07690 Major Facilitator Superfamily 31 399 1.7E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0382 b960ea3e2cb68a3bd4b43b8481447e32 454 SUPERFAMILY SSF103473 23 435 2.75E-51 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 SUPERFAMILY SSF53092 8 176 2.09E-13 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 Gene3D G3DSA:3.40.350.10 13 176 2.4E-14 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 SUPERFAMILY SSF55920 174 402 2.22E-47 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 1.3E-27 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 Gene3D G3DSA:3.90.230.10 177 403 8.4E-46 T 12-10-2018 YpsIP31758_2132 b6b4d28678767d51e25bbc2c6a602bbc 405 Pfam PF00557 Metallopeptidase family M24 184 388 2.2E-34 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_1959 61c44d81695c7b98986ff20cb1ed079a 306 SUPERFAMILY SSF161098 91 291 2.94E-20 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1959 61c44d81695c7b98986ff20cb1ed079a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1959 61c44d81695c7b98986ff20cb1ed079a 306 Gene3D G3DSA:1.10.3720.10 85 301 5.1E-20 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 SMART SM00992 3 102 4.5E-36 T 12-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 Gene3D G3DSA:2.30.30.390 1 105 3.0E-39 T 12-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 36.691 T 12-10-2018 IPR022866 Heat shock protein HspQ YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 3.6E-19 T 12-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 SUPERFAMILY SSF141255 4 96 6.02E-30 T 12-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 YpsIP31758_2532 f0a2e8c2a013d6f736753e664607add6 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 101 6.1E-32 T 12-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.1E-25 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PRINTS PR01009 Flagellar M-ring protein signature 117 135 2.1E-25 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PRINTS PR01009 Flagellar M-ring protein signature 149 163 2.1E-25 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PRINTS PR01009 Flagellar M-ring protein signature 334 358 2.1E-25 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.1E-25 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 Pfam PF01514 Secretory protein of YscJ/FliF family 26 218 2.7E-58 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 538 1.2E-59 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 PIRSF PIRSF004862 1 540 1.1E-107 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 Gene3D G3DSA:3.30.300.30 115 221 5.3E-9 T 12-10-2018 YpsIP31758_0631 b8fa10f4992ebb6f78021068c5a8fbe9 546 Pfam PF08345 Flagellar M-ring protein C-terminal 252 403 1.2E-35 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal YpsIP31758_1692 d341e2736941bcfdf6dd4620f4ad7ca6 555 PIRSF PIRSF001432 1 555 1.8E-296 T 12-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YpsIP31758_1692 d341e2736941bcfdf6dd4620f4ad7ca6 555 Gene3D G3DSA:1.50.10.20 16 309 2.4E-97 T 12-10-2018 YpsIP31758_1692 d341e2736941bcfdf6dd4620f4ad7ca6 555 Gene3D G3DSA:1.50.10.20 321 376 1.2E-5 T 12-10-2018 YpsIP31758_1692 d341e2736941bcfdf6dd4620f4ad7ca6 555 Gene3D G3DSA:1.50.10.20 377 519 7.1E-30 T 12-10-2018 YpsIP31758_1692 d341e2736941bcfdf6dd4620f4ad7ca6 555 Pfam PF06917 Periplasmic pectate lyase 14 540 2.0E-124 T 12-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YpsIP31758_1393 10ff0c94b2b06b8644d2573e6eb4bd81 188 Pfam PF08534 Redoxin 47 169 1.0E-24 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 YpsIP31758_1393 10ff0c94b2b06b8644d2573e6eb4bd81 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_1393 10ff0c94b2b06b8644d2573e6eb4bd81 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 2.4E-75 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 YpsIP31758_1393 10ff0c94b2b06b8644d2573e6eb4bd81 188 SUPERFAMILY SSF52833 51 184 3.25E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1393 10ff0c94b2b06b8644d2573e6eb4bd81 188 Gene3D G3DSA:3.40.30.10 26 186 6.2E-46 T 12-10-2018 YpsIP31758_1334 b65f67732a14ab66e534f02ce3b6869d 411 Gene3D G3DSA:3.90.1150.10 294 391 2.8E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1334 b65f67732a14ab66e534f02ce3b6869d 411 SUPERFAMILY SSF53383 10 394 2.18E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1334 b65f67732a14ab66e534f02ce3b6869d 411 Pfam PF00155 Aminotransferase class I and II 37 387 5.9E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1334 b65f67732a14ab66e534f02ce3b6869d 411 Gene3D G3DSA:3.40.640.10 70 293 2.8E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3101 d6def7e7622e1b6429d225298cf11e17 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-39 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 YpsIP31758_3101 d6def7e7622e1b6429d225298cf11e17 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 1.0E-18 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:1.20.1640.10 516 1026 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82866 296 497 4.97E-49 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82866 807 1032 2.09E-44 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.70.1440 675 865 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82693 38 132 8.11E-27 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.1E-115 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82714 724 811 1.31E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82693 135 330 1.74E-28 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82714 182 272 2.09E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 SUPERFAMILY SSF82693 566 670 1.41E-32 T 12-10-2018 YpsIP31758_3068 5a46645827723f02afe95a203ab6e5f2 1050 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_0291 a91515fffd68bc7c38c27f00aed6fa7d 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0291 a91515fffd68bc7c38c27f00aed6fa7d 402 Pfam PF00872 Transposase, Mutator family 12 377 3.4E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0015 a91515fffd68bc7c38c27f00aed6fa7d 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0015 a91515fffd68bc7c38c27f00aed6fa7d 402 Pfam PF00872 Transposase, Mutator family 12 377 3.4E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 Gene3D G3DSA:3.30.70.20 64 134 4.3E-27 T 12-10-2018 YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 SUPERFAMILY SSF54862 1 162 1.78E-39 T 12-10-2018 YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 Gene3D G3DSA:3.30.70.20 6 159 4.3E-27 T 12-10-2018 YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 Pfam PF12800 4Fe-4S binding domain 12 22 0.14 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_3683 333d37c656d1a0692bb7a5e3454dace7 185 Pfam PF13187 4Fe-4S dicluster domain 88 155 5.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_0091 a09b26165dbe680af8bd3661c2d91353 258 SUPERFAMILY SSF53850 33 257 6.21E-40 T 12-10-2018 YpsIP31758_0091 a09b26165dbe680af8bd3661c2d91353 258 Pfam PF13531 Bacterial extracellular solute-binding protein 34 255 3.5E-33 T 12-10-2018 YpsIP31758_0091 a09b26165dbe680af8bd3661c2d91353 258 Gene3D G3DSA:3.40.190.10 41 248 1.6E-26 T 12-10-2018 YpsIP31758_0091 a09b26165dbe680af8bd3661c2d91353 258 Gene3D G3DSA:3.40.190.10 111 218 1.6E-26 T 12-10-2018 YpsIP31758_3992 f0683d64d305c20720001984c16e6ad6 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 2.5E-243 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YpsIP31758_3992 f0683d64d305c20720001984c16e6ad6 698 Gene3D G3DSA:3.20.20.80 144 689 3.6E-124 T 12-10-2018 YpsIP31758_3992 f0683d64d305c20720001984c16e6ad6 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 2.3E-131 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YpsIP31758_3992 f0683d64d305c20720001984c16e6ad6 698 SUPERFAMILY SSF51445 145 687 1.8E-148 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 SUPERFAMILY SSF53187 23 413 1.89E-79 T 12-10-2018 YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 413 3.8E-116 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 Gene3D G3DSA:3.30.70.360 220 334 1.4E-134 T 12-10-2018 YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 Gene3D G3DSA:3.40.630.10 31 409 1.4E-134 T 12-10-2018 YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 PIRSF PIRSF001235 9 418 4.6E-130 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 SUPERFAMILY SSF55031 220 334 2.09E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YpsIP31758_3185 819f76e1c3feebb1701a0b0036a899b3 427 Pfam PF01546 Peptidase family M20/M25/M40 84 412 9.3E-27 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_3447 0bdf18e0932db80f3d6e28e28c81d159 154 Pfam PF12582 Protein of unknown function (DUF3757) 22 140 1.2E-26 T 12-10-2018 IPR022231 Protein of unknown function DUF3757 YpsIP31758_1191 ea53b88479bc3350675785bd9dcc59ba 318 Gene3D G3DSA:1.20.1530.20 161 316 3.0E-5 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily YpsIP31758_1191 ea53b88479bc3350675785bd9dcc59ba 318 Pfam PF03547 Membrane transport protein 14 150 1.7E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YpsIP31758_1191 ea53b88479bc3350675785bd9dcc59ba 318 Pfam PF03547 Membrane transport protein 169 307 2.2E-10 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Gene3D G3DSA:3.30.499.10 373 590 4.9E-101 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 431 442 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 372 386 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 493 506 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 279 292 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 146 159 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 170 178 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 217 232 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 293 306 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 PRINTS PR00415 Aconitase family signature 203 216 1.0E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 7.5E-184 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Gene3D G3DSA:1.10.1440.20 592 650 1.4E-17 T 12-10-2018 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 SUPERFAMILY SSF53732 11 626 8.89E-223 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Gene3D G3DSA:3.20.19.10 653 890 1.1E-105 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 SUPERFAMILY SSF52016 629 890 5.89E-90 T 12-10-2018 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Gene3D G3DSA:3.30.499.20 6 372 5.1E-160 T 12-10-2018 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 Pfam PF00694 Aconitase C-terminal domain 691 818 5.0E-49 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 YpsIP31758_1920 3ac7fcf72c06aea2627462ed2393d8d6 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_2584 f686b2d047bd4e98309d533d32a203d2 615 SUPERFAMILY SSF54523 526 613 2.04E-13 T 12-10-2018 YpsIP31758_2584 f686b2d047bd4e98309d533d32a203d2 615 Gene3D G3DSA:2.150.10.10 236 390 4.1E-8 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_2584 f686b2d047bd4e98309d533d32a203d2 615 Pfam PF03895 YadA-like membrane anchor domain 561 613 1.8E-7 T 12-10-2018 IPR005594 YadA-like, C-terminal YpsIP31758_2584 f686b2d047bd4e98309d533d32a203d2 615 Gene3D G3DSA:3.30.1300.30 514 614 1.4E-13 T 12-10-2018 YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 SMART SM00072 1 181 1.7E-12 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 36.483 T 12-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 9.2E-66 T 12-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 Pfam PF13238 AAA domain 5 138 1.2E-8 T 12-10-2018 YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 SUPERFAMILY SSF52540 1 177 1.13E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.30.63.10 34 89 3.4E-19 T 12-10-2018 YpsIP31758_3567 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.40.50.300 7 177 3.4E-19 T 12-10-2018 YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4351 4445 4.32E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1925 2018 2.94E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4052 4147 4.71E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 3765 3841 1.6E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 4054 4140 2.7E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 1060 1140 1.6E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 473 560 1.0E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 4257 4343 8.7E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 3661 3743 2.8E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 1157 1237 2.0E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 963 1043 1.4E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 4663 4748 1.7E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 572 658 1.0E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 1735 1822 6.8E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 1254 1341 1.4E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 2024 2111 1.3E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 4559 4646 1.5E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 770 845 1.2E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 866 946 1.8E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF02369 Bacterial Ig-like domain (group 1) 3868 3949 6.4E-12 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2310 2403 7.65E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3556 3653 9.8E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1536 1631 1.2E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4457 4555 9.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4056 4154 4.3E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 467 562 1.2E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3654 3750 7.3E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1729 1824 2.6E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1921 2017 5.2E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2210 2306 2.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1825 1920 6.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4255 4352 7.8E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2787 2881 5.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 565 660 1.1E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2691 2785 3.0E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4356 4449 9.5E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 956 1052 3.9E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3171 3265 1.1E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2595 2689 3.0E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 759 859 1.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2498 2593 2.3E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4157 4250 1.5E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3754 3852 1.0E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2882 2977 5.2E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3855 3952 4.4E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3955 4054 4.7E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1247 1343 1.8E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3363 3458 7.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4655 4753 6.9E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3073 3170 9.1E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1150 1246 3.1E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2978 3072 5.9E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2307 2401 2.2E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3459 3555 1.8E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2403 2497 1.8E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 3266 3361 1.2E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1053 1149 1.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 663 757 2.7E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1344 1440 9.1E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1441 1535 5.1E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 1632 1728 5.1E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2018 2113 2.1E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 4556 4654 4.5E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 860 955 2.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.60.40.10 2114 2209 4.9E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2598 2691 4.71E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2790 2883 1.96E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3553 3654 3.92E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3748 3853 8.63E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1540 1633 2.35E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3950 4054 1.41E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2502 2595 4.71E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1636 1729 2.94E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2214 2307 5.89E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF11924 Inverse autotransporter, beta-domain 85 358 1.9E-116 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1829 1922 9.03E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3174 3267 9.81E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 960 1050 2.6E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3270 3359 7.9E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 765 854 1.6E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3078 3167 2.6E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2118 2206 6.1E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4660 4749 5.9E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1829 1918 8.3E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1636 1725 6.6E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1925 2014 6.6E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2982 3070 2.0E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2310 2399 1.1E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2886 2974 6.2E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2790 2879 3.3E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4060 4149 3.8E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3366 3454 6.1E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2021 2111 3.4E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3462 3552 0.014 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3560 3649 4.8E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1057 1147 4.7E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1348 1437 3.0E-4 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2406 2495 1.2E-5 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 666 755 0.02 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4158 4247 1.3E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 570 659 1.1E-12 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1540 1629 9.1E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3760 3847 5.8E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3860 3949 7.4E-13 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3960 4049 0.0017 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2214 2302 1.9E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2502 2591 1.2E-5 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1444 1532 4.9E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3174 3263 5.1E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2598 2687 1.2E-5 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 3658 3747 2.1E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 2694 2783 1.1E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1251 1341 3.4E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 863 953 4.4E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 470 559 2.0E-14 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1732 1822 6.6E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 1154 1244 1.2E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4458 4550 0.21 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4259 4348 0.0091 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4562 4651 6.0E-12 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00634 4361 4449 1.2E-5 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3850 3950 3.73E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 960 1054 6.87E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1732 1826 7.06E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 470 563 2.75E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3078 3171 2.35E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4554 4656 3.34E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3462 3556 1.65E-13 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 663 745 9.03E-14 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:3.10.350.10 2 68 3.0E-8 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4159 4252 1.35E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 757 859 8.83E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Gene3D G3DSA:2.40.160.160 121 365 3.9E-111 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2982 3075 3.53E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4660 4753 8.24E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1348 1441 1.63E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4453 4549 1.02E-13 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1154 1248 1.69E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 865 957 2.16E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2021 2115 1.61E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4248 4340 3.73E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1251 1345 4.12E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1057 1151 1.31E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3270 3363 3.92E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 4103 4133 5300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 571 593 8900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 2353 2374 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 1583 1604 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 213 250 9900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 2257 2278 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 3121 3142 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 2737 2758 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 3888 3910 9700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 613 634 10000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 4286 4308 2500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00710 1487 1508 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2117 2209 7.06E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 572 662 9.61E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 Pfam PF01476 LysM domain 11 58 8.7E-6 T 12-10-2018 IPR018392 LysM domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3658 3751 5.1E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 PRINTS PR01369 Intimin signature 393 405 2.8E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 PRINTS PR01369 Intimin signature 238 257 2.8E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 PRINTS PR01369 Intimin signature 210 225 2.8E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 PRINTS PR01369 Intimin signature 306 325 2.8E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2694 2787 7.65E-19 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2406 2499 5.1E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SMART SM00257 10 58 2.0E-6 T 12-10-2018 IPR018392 LysM domain YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 4755 4836 2.24E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 1444 1537 1.57E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 2886 2979 2.55E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_4008 76f8ec006b8bb53615fb1b7594f1820a 4953 SUPERFAMILY SSF49373 3366 3459 7.65E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.40.50.300 205 379 1.2E-47 T 12-10-2018 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF01926 50S ribosome-binding GTPase 210 327 8.4E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.3E-27 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PIRSF PIRSF006485 1 471 1.6E-177 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Hamap MF_00195 GTPase Der [der]. 2 466 38.65 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.9E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.40.50.300 2 160 1.9E-42 T 12-10-2018 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 2.6E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 4.4E-177 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 SUPERFAMILY SSF52540 207 469 2.7E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 3.4E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 372 5.2E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 SUPERFAMILY SSF52540 4 168 6.39E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1190 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.30.300.20 383 465 1.5E-19 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_2366 6c5cc686bbb8077a24033660da0eac63 155 Pfam PF01047 MarR family 29 86 1.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_2366 6c5cc686bbb8077a24033660da0eac63 155 Gene3D G3DSA:1.10.10.10 1 134 1.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2366 6c5cc686bbb8077a24033660da0eac63 155 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.2E-54 T 12-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 YpsIP31758_2366 6c5cc686bbb8077a24033660da0eac63 155 SMART SM00347 22 122 1.3E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_2366 6c5cc686bbb8077a24033660da0eac63 155 SUPERFAMILY SSF46785 4 138 1.34E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3762 7aaeb75657213b53e752f3e2b8973b8f 119 SUPERFAMILY SSF142906 1 115 1.09E-36 T 12-10-2018 IPR038056 YjbR-like superfamily YpsIP31758_3762 7aaeb75657213b53e752f3e2b8973b8f 119 Pfam PF04237 YjbR 11 102 4.5E-20 T 12-10-2018 IPR007351 Uncharacterised protein YjbR YpsIP31758_3762 7aaeb75657213b53e752f3e2b8973b8f 119 Gene3D G3DSA:3.90.1150.30 1 119 2.0E-41 T 12-10-2018 IPR038056 YjbR-like superfamily YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Gene3D G3DSA:3.30.565.10 735 896 9.2E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 1.1E-98 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Gene3D G3DSA:1.20.120.620 397 503 2.2E-39 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SMART SM00387 776 886 5.7E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Gene3D G3DSA:3.40.50.300 20 230 5.1E-102 T 12-10-2018 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SUPERFAMILY SSF55874 721 888 8.51E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Pfam PF13492 GAF domain 530 646 2.8E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Gene3D G3DSA:1.10.287.130 655 734 6.2E-14 T 12-10-2018 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SUPERFAMILY SSF47384 660 733 2.55E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SUPERFAMILY SSF52402 254 361 2.09E-6 T 12-10-2018 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Gene3D G3DSA:3.30.450.40 512 654 1.3E-36 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SMART SM00388 665 732 7.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 2.0E-30 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 886 4.0E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 SUPERFAMILY SSF55781 510 658 1.52E-7 T 12-10-2018 YpsIP31758_1103 2ceb601bbe769aae54489de8012fc62d 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 296 46.873 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 3 295 1.7E-152 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 SMART SM00046 3 129 5.4E-17 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 8.2E-27 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 Gene3D G3DSA:3.40.50.10330 22 284 1.1E-88 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 SUPERFAMILY SSF111331 1 293 1.77E-69 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 290 2.0E-92 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase YpsIP31758_1207 d7ac21d87460bcd301116b1c3ede3a5b 296 Gene3D G3DSA:2.60.200.40 123 281 1.1E-88 T 12-10-2018 YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.9E-58 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 Gene3D G3DSA:3.40.50.150 30 208 2.9E-61 T 12-10-2018 YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.8E-94 T 12-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 SUPERFAMILY SSF53335 31 207 1.02E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.559 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 YpsIP31758_3603 83666caa3e500841ab9d45a6f5eda363 209 PIRSF PIRSF005461 1 209 1.1E-81 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Gene3D G3DSA:3.30.450.40 6 192 2.2E-46 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Gene3D G3DSA:1.10.10.60 560 604 1.5E-12 T 12-10-2018 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 SMART SM00382 327 471 6.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Gene3D G3DSA:1.10.8.60 484 554 1.5E-9 T 12-10-2018 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 SUPERFAMILY SSF46689 518 599 5.68E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Pfam PF02954 Bacterial regulatory protein, Fis family 566 598 2.9E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 SUPERFAMILY SSF52540 323 541 5.13E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Gene3D G3DSA:3.40.50.300 313 479 2.3E-55 T 12-10-2018 YpsIP31758_1863 515cbfa86542c5089d8bfe2e3d491543 605 Pfam PF00158 Sigma-54 interaction domain 319 474 3.0E-58 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 SMART SM00098 75 481 5.1E-189 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 ProSitePatterns PS00123 Alkaline phosphatase active site. 131 139 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 231 241 4.1E-47 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 168 188 4.1E-47 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 131 146 4.1E-47 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 330 359 4.1E-47 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 74 94 4.1E-47 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 SUPERFAMILY SSF53649 47 480 8.51E-132 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 Gene3D G3DSA:3.40.720.10 35 481 4.8E-146 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_1835 8d5a0c3a0cf248f594509bf0608e7d8d 481 Pfam PF00245 Alkaline phosphatase 75 440 4.9E-118 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YpsIP31758_2896 c0fac093a306f107c0672fd50f00c830 87 Pfam PF01527 Transposase 2 70 3.0E-23 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2896 c0fac093a306f107c0672fd50f00c830 87 SUPERFAMILY SSF46689 1 72 2.33E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 Gene3D G3DSA:3.40.190.10 90 284 6.9E-57 T 12-10-2018 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 SUPERFAMILY SSF46785 4 84 2.26E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 SUPERFAMILY SSF53850 90 298 2.41E-40 T 12-10-2018 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 Pfam PF03466 LysR substrate binding domain 89 296 1.7E-42 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 Gene3D G3DSA:3.40.190.10 165 272 6.9E-57 T 12-10-2018 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.1E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 Gene3D G3DSA:1.10.10.10 1 86 1.8E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1870 8047b0aba0e031616565dbf8fa3a2369 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 410 1.3E-97 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 Gene3D G3DSA:2.60.98.20 146 310 2.6E-34 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 Pfam PF00460 Flagella basal body rod protein 4 33 4.0E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 350 427 1.1E-22 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 SUPERFAMILY SSF117143 73 389 1.96E-77 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_2321 757f3b695096d6a4565490e30b65c023 428 Pfam PF07559 Flagellar basal body protein FlaE 174 309 4.3E-18 T 12-10-2018 IPR011491 Flagellar hook protein FlgE YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 3 270 2.0E-106 T 12-10-2018 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 4.2E-102 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 38.968 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 3 122 6.0E-34 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 152 267 2.3E-31 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 115 261 2.0E-106 T 12-10-2018 YpsIP31758_0205 c27ec898f19ac287e2e6d136a147136c 274 SUPERFAMILY SSF54506 2 273 1.68E-53 T 12-10-2018 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SUPERFAMILY SSF47781 521 609 1.05E-17 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Gene3D G3DSA:3.40.1440.10 5 102 7.3E-32 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 9.4E-46 T 12-10-2018 IPR001162 UvrC family homology region YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SUPERFAMILY SSF46600 191 243 4.05E-13 T 12-10-2018 IPR036876 UVR domain superfamily YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SUPERFAMILY SSF82771 17 100 1.09E-24 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Gene3D G3DSA:4.10.860.10 188 241 2.4E-5 T 12-10-2018 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Gene3D G3DSA:1.10.150.20 555 610 2.0E-23 T 12-10-2018 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 1.3E-227 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 1.1E-7 T 12-10-2018 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.078 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SMART SM00278 588 607 0.12 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SMART SM00278 556 575 34.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Gene3D G3DSA:3.30.420.340 377 552 1.9E-46 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.8E-12 T 12-10-2018 IPR000305 GIY-YIG endonuclease YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 SMART SM00465 17 98 1.0E-22 T 12-10-2018 IPR000305 GIY-YIG endonuclease YpsIP31758_2252 19a158c38cc3905719e8cb37f1057970 610 Pfam PF02151 UvrB/uvrC motif 205 237 2.1E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 8.6E-70 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 SUPERFAMILY SSF52317 3 195 4.28E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 12-10-2018 YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 12-10-2018 YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 PIRSF PIRSF000495 1 196 2.1E-63 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 Pfam PF00117 Glutamine amidotransferase class-I 40 194 6.0E-19 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 Gene3D G3DSA:3.40.50.880 1 196 1.2E-67 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_2432 a2fa9a1ce4429c35711945859813a95f 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.404 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:1.10.1420.10 387 503 1.2E-104 T 12-10-2018 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.40.1170.10 2 124 3.3E-51 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.30.420.110 130 265 1.7E-38 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF55271 5 116 4.45E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:3.40.50.300 570 841 8.7E-101 T 12-10-2018 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05190 MutS family domain IV 428 517 2.0E-28 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF48334 270 566 6.41E-90 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Gene3D G3DSA:1.10.1420.10 269 559 1.2E-104 T 12-10-2018 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF53150 117 269 8.76E-43 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SMART SM00533 286 591 6.3E-105 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 PIRSF PIRSF037677 200 826 4.6E-123 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 PIRSF PIRSF037677 3 192 4.2E-27 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05188 MutS domain II 131 256 4.5E-34 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SMART SM00534 607 794 2.7E-122 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF01624 MutS domain I 11 122 1.4E-40 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF05192 MutS domain III 272 559 2.5E-38 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.249 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 SUPERFAMILY SSF52540 567 798 4.83E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3292 85eca32d03260edfc0b25558b72fb3fd 851 Pfam PF00488 MutS domain V 610 797 2.5E-88 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 SUPERFAMILY SSF52374 1 313 1.23E-101 T 12-10-2018 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 SMART SM00840 341 402 1.9E-27 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.1E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.1E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.1E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.1E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 8.4E-142 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.2E-192 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 Gene3D G3DSA:3.40.50.620 1 305 4.8E-134 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 Gene3D G3DSA:1.20.120.640 306 461 1.7E-56 T 12-10-2018 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 SUPERFAMILY SSF47323 316 460 1.44E-43 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.261 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 YpsIP31758_3014 9c1992e8c77ba918b439142267e97988 461 Pfam PF09190 DALR domain 341 402 1.9E-24 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 281 2.1E-16 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF52151 6 282 1.26E-51 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 Pfam PF00698 Acyl transferase domain 8 231 2.0E-18 T 12-10-2018 IPR014043 Acyl transferase YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF55048 124 191 4.05E-12 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 PIRSF PIRSF000446 2 282 3.7E-68 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.40.366.10 8 277 2.3E-75 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 YpsIP31758_2512 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.30.70.250 123 190 2.3E-75 T 12-10-2018 YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 5.9E-78 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 8.1E-27 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 Gene3D G3DSA:3.30.70.20 1 204 1.6E-53 T 12-10-2018 YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0023 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 SUPERFAMILY SSF54862 3 200 2.3E-68 T 12-10-2018 YpsIP31758_3260 fe7632104c811f9eaf7fb256c1150e3d 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 SUPERFAMILY SSF53901 4 316 1.55E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 1 170 3.5E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 69.865 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.0E-145 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.8E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 171 316 2.6E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1576 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 3.0E-35 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 PIRSF PIRSF001205 13 436 9.6E-123 T 12-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 Pfam PF08548 Peptidase M10 serralysin C terminal 222 435 6.4E-86 T 12-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 SMART SM00235 43 222 3.4E-17 T 12-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 Gene3D G3DSA:2.150.10.10 227 426 5.4E-137 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 SUPERFAMILY SSF55486 29 220 5.14E-52 T 12-10-2018 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 Gene3D G3DSA:3.40.390.10 37 226 5.4E-137 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 SUPERFAMILY SSF51120 224 434 1.15E-34 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_4037 4ff8582997bbef30d9c227791c9c89cd 442 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 355 377 0.0015 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 29.001 T 12-10-2018 IPR023006 Uncharacterised protein family UPF0225 YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 Gene3D G3DSA:3.10.450.50 2 154 2.2E-51 T 12-10-2018 YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 SUPERFAMILY SSF54427 25 130 9.44E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 SUPERFAMILY SSF103642 134 153 1.24E-6 T 12-10-2018 YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 Pfam PF02810 SEC-C motif 3 19 2.9E-6 T 12-10-2018 IPR004027 SEC-C motif YpsIP31758_1970 96bbc4e7dc6978c54ea966673d5f7b6a 154 Pfam PF02810 SEC-C motif 136 154 4.8E-8 T 12-10-2018 IPR004027 SEC-C motif YpsIP31758_3265 24b75ceeaa71560ded6b9b438ce42889 335 Pfam PF13407 Periplasmic binding protein domain 38 293 7.4E-52 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_3265 24b75ceeaa71560ded6b9b438ce42889 335 Gene3D G3DSA:3.40.50.2300 136 273 5.8E-84 T 12-10-2018 YpsIP31758_3265 24b75ceeaa71560ded6b9b438ce42889 335 SUPERFAMILY SSF53822 33 304 5.42E-63 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3265 24b75ceeaa71560ded6b9b438ce42889 335 Gene3D G3DSA:3.40.50.2300 39 305 5.8E-84 T 12-10-2018 YpsIP31758_1582 38318dcafa8f595b33440a32a544a793 341 Gene3D G3DSA:3.30.160.60 303 341 8.1E-21 T 12-10-2018 YpsIP31758_1582 38318dcafa8f595b33440a32a544a793 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 333 33.761 T 12-10-2018 IPR003770 Endolytic murein transglycosylase YpsIP31758_1582 38318dcafa8f595b33440a32a544a793 341 Gene3D G3DSA:3.30.160.60 72 110 1.9E-24 T 12-10-2018 YpsIP31758_1582 38318dcafa8f595b33440a32a544a793 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 337 1.7E-122 T 12-10-2018 IPR003770 Endolytic murein transglycosylase YpsIP31758_1582 38318dcafa8f595b33440a32a544a793 341 Pfam PF02618 YceG-like family 44 329 3.1E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase YpsIP31758_1925 75456db55a354ea596218c5ff0193008 348 SUPERFAMILY SSF52096 96 298 1.1E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1925 75456db55a354ea596218c5ff0193008 348 Pfam PF01343 Peptidase family S49 160 304 3.5E-45 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YpsIP31758_1925 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.40.1750.20 201 265 7.7E-43 T 12-10-2018 YpsIP31758_1925 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.90.226.10 104 300 7.7E-43 T 12-10-2018 YpsIP31758_1925 75456db55a354ea596218c5ff0193008 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 4.9E-58 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 YpsIP31758_2138 bd56aee6fb75eaeee8c5b33f3850279a 430 Pfam PF02687 FtsX-like permease family 335 422 4.7E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_3375 059cccc1baecf92b3ae58a6cd6c6afd5 250 Gene3D G3DSA:2.60.440.10 9 250 3.3E-84 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal YpsIP31758_3375 059cccc1baecf92b3ae58a6cd6c6afd5 250 Gene3D G3DSA:1.10.3900.10 16 182 3.3E-84 T 12-10-2018 YpsIP31758_3375 059cccc1baecf92b3ae58a6cd6c6afd5 250 SUPERFAMILY SSF160950 6 250 1.57E-91 T 12-10-2018 IPR036268 ZapD domain superfamily YpsIP31758_3375 059cccc1baecf92b3ae58a6cd6c6afd5 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.817 T 12-10-2018 IPR009777 Cell division protein ZapD YpsIP31758_3375 059cccc1baecf92b3ae58a6cd6c6afd5 250 Pfam PF07072 Cell division protein 22 228 6.4E-78 T 12-10-2018 IPR009777 Cell division protein ZapD YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:3.30.70.260 321 395 1.3E-49 T 12-10-2018 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:3.30.70.260 315 458 1.3E-49 T 12-10-2018 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 16 461 9.7E-140 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF55021 308 369 7.44E-14 T 12-10-2018 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF53633 16 304 6.28E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:1.20.120.1320 54 146 5.0E-101 T 12-10-2018 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 Pfam PF00696 Amino acid kinase family 16 289 6.2E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 SUPERFAMILY SSF55021 389 460 1.72E-14 T 12-10-2018 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 460 1.9E-131 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 ProSitePatterns PS00324 Aspartokinase signature. 18 26 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 PIRSF PIRSF000726 14 461 2.6E-150 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0301 cfc85d49bad720916418facb6fa150dd 461 Gene3D G3DSA:3.40.1160.10 18 301 5.0E-101 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Gene3D G3DSA:3.90.930.1 195 335 1.4E-20 T 12-10-2018 YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Gene3D G3DSA:3.90.930.1 336 481 2.1E-18 T 12-10-2018 YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SUPERFAMILY SSF81901 569 712 2.7E-33 T 12-10-2018 YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF08238 Sel1 repeat 672 705 3.3E-5 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF08238 Sel1 repeat 600 633 0.0084 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF08238 Sel1 repeat 581 597 1.0 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF08238 Sel1 repeat 635 670 2.2E-7 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SUPERFAMILY SSF82185 422 547 1.05E-19 T 12-10-2018 YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 357 376 0.017 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 384 400 0.49 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 211 228 0.35 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 307 326 0.016 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 404 425 0.066 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 284 304 0.19 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 259 278 0.15 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Pfam PF07661 MORN repeat variant 457 472 0.32 T 12-10-2018 IPR011652 MORN variant YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SMART SM00671 671 706 7.4E-8 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SMART SM00671 635 670 7.4E-9 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SMART SM00671 599 634 5.4E-4 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SMART SM00671 567 598 1.6 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 SUPERFAMILY SSF82185 229 352 2.03E-20 T 12-10-2018 YpsIP31758_2097 b27e34afe878fa6e865c71b3d9ba5405 720 Gene3D G3DSA:1.25.40.10 529 720 5.9E-49 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1366 79fddd6b1184f2c9fe51083108bfece2 202 Pfam PF00419 Fimbrial protein 48 201 2.3E-12 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_1366 79fddd6b1184f2c9fe51083108bfece2 202 SUPERFAMILY SSF49401 54 202 4.28E-20 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1366 79fddd6b1184f2c9fe51083108bfece2 202 Gene3D G3DSA:2.60.40.1090 45 201 2.6E-22 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 SUPERFAMILY SSF52374 64 222 2.68E-20 T 12-10-2018 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 SUPERFAMILY SSF47413 5 59 1.19E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 SUPERFAMILY SSF52540 232 404 1.53E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 Gene3D G3DSA:1.10.260.40 5 64 2.9E-7 T 12-10-2018 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 SMART SM00530 6 62 5.0E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 Pfam PF13521 AAA domain 234 394 2.4E-33 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.3E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.7E-154 T 12-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 Pfam PF01381 Helix-turn-helix 7 58 2.9E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 Gene3D G3DSA:3.40.50.620 65 230 1.4E-45 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 PIRSF PIRSF004776 2 415 7.4E-221 T 12-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 YpsIP31758_3491 9b3fe987896b8938eea95778169164f6 423 Gene3D G3DSA:3.40.50.300 231 399 1.2E-57 T 12-10-2018 YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 291 3.7E-142 T 12-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 28 229 4.0E-102 T 12-10-2018 YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 SUPERFAMILY SSF54862 29 275 9.63E-70 T 12-10-2018 YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 291 4.1E-23 T 12-10-2018 IPR015246 Formate dehydrogenase, transmembrane YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 8.8E-25 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 18 164 4.0E-102 T 12-10-2018 YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:1.20.5.480 249 296 1.4E-26 T 12-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily YpsIP31758_4118 4bd4d7dd9822d8c2cd7d624ebc957273 323 PIRSF PIRSF036298 1 320 4.7E-168 T 12-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 PIRSF PIRSF003107 7 226 9.9E-68 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.7E-74 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 Gene3D G3DSA:1.20.58.220 1 121 6.4E-43 T 12-10-2018 IPR038078 PhoU-like domain superfamily YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 Gene3D G3DSA:1.20.58.220 122 234 2.2E-32 T 12-10-2018 IPR038078 PhoU-like domain superfamily YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 SUPERFAMILY SSF109755 13 230 1.78E-70 T 12-10-2018 YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 Pfam PF01895 PhoU domain 128 212 7.3E-17 T 12-10-2018 IPR026022 PhoU domain YpsIP31758_4167 ed45196deeb4cbd477033b2625599b29 240 Pfam PF01895 PhoU domain 26 111 2.5E-22 T 12-10-2018 IPR026022 PhoU domain YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 Gene3D G3DSA:1.10.8.60 173 239 1.6E-27 T 12-10-2018 YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 SUPERFAMILY SSF52540 24 217 1.33E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 Gene3D G3DSA:3.40.50.300 3 170 1.3E-35 T 12-10-2018 YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 49 69 1.3E-6 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 164 1.3E-6 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 Pfam PF00308 Bacterial dnaA protein 22 218 1.7E-17 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 11 239 58.653 T 12-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YpsIP31758_1237 97876bae930b3cae14600e6c0d4ea492 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 237 8.2E-85 T 12-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00382 157 300 3.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00072 Response regulator receiver domain 10 118 1.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.2300 5 132 2.0E-36 T 12-10-2018 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00158 Sigma-54 interaction domain 137 303 5.1E-72 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.8.60 308 386 3.6E-22 T 12-10-2018 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00448 7 118 2.8E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.300 133 307 1.3E-63 T 12-10-2018 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52540 136 381 1.66E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF46689 388 438 1.85E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52172 6 181 5.27E-43 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1152 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.10.60 389 441 1.5E-9 T 12-10-2018 YpsIP31758_1836 d3b57219e7e589d8e7fc739595dedb21 798 Pfam PF13208 TerB N-terminal domain 131 333 3.7E-50 T 12-10-2018 IPR025266 TerB, N-terminal YpsIP31758_1836 d3b57219e7e589d8e7fc739595dedb21 798 SUPERFAMILY SSF158682 546 659 4.27E-15 T 12-10-2018 IPR029024 TerB-like YpsIP31758_1836 d3b57219e7e589d8e7fc739595dedb21 798 Pfam PF15615 TerB-C domain 682 795 4.6E-7 T 12-10-2018 IPR028932 TerB-C domain YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Gene3D G3DSA:2.60.40.4050 530 594 2.1E-16 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 SUPERFAMILY SSF101967 365 501 1.06E-18 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 SUPERFAMILY SSF54523 605 716 4.71E-24 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 SUPERFAMILY SSF101967 526 616 9.15E-20 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 SUPERFAMILY SSF101967 195 340 9.68E-21 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05658 Head domain of trimeric autotransporter adhesin 257 283 5.2E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05658 Head domain of trimeric autotransporter adhesin 416 442 1.1E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Gene3D G3DSA:2.150.10.10 86 181 4.7E-5 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF03895 YadA-like membrane anchor domain 657 716 2.6E-16 T 12-10-2018 IPR005594 YadA-like, C-terminal YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Gene3D G3DSA:3.30.1300.30 615 716 8.8E-30 T 12-10-2018 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Gene3D G3DSA:2.150.10.10 247 371 4.8E-27 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Gene3D G3DSA:2.150.10.10 375 529 1.0E-31 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 594 632 2.3E-10 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 480 519 1.2E-5 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 156 182 2.0E-4 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_0868 f8eb5eebf113e0d7fefe0d5f7765edc7 716 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 318 358 6.5E-10 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_2875 0d8aad14b395aa6cfda647c91a42682b 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 4.3E-110 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YpsIP31758_2875 0d8aad14b395aa6cfda647c91a42682b 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.3E-192 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YpsIP31758_2875 0d8aad14b395aa6cfda647c91a42682b 379 PIRSF PIRSF000267 2 378 1.1E-131 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 40.666 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 Gene3D G3DSA:3.40.50.12280 26 194 1.6E-68 T 12-10-2018 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 2.6E-67 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 SUPERFAMILY SSF56770 43 178 4.32E-62 T 12-10-2018 YpsIP31758_1455 9cabfc12fcc4d608f48198530c62b504 227 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.3E-22 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3113 9f85ea1aba9f6537569324de4ee61718 161 PIRSF PIRSF006162 4 161 5.5E-62 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YpsIP31758_3113 9f85ea1aba9f6537569324de4ee61718 161 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 8.6E-55 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YpsIP31758_3113 9f85ea1aba9f6537569324de4ee61718 161 SUPERFAMILY SSF101307 8 157 1.14E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 YpsIP31758_3087 3858cc7dd0b67d9d873b14fa5166279a 148 Gene3D G3DSA:1.10.150.280 73 146 5.6E-20 T 12-10-2018 YpsIP31758_3087 3858cc7dd0b67d9d873b14fa5166279a 148 Pfam PF12836 Helix-hairpin-helix motif 83 146 1.2E-21 T 12-10-2018 YpsIP31758_3087 3858cc7dd0b67d9d873b14fa5166279a 148 SUPERFAMILY SSF47781 72 146 7.23E-24 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_3087 3858cc7dd0b67d9d873b14fa5166279a 148 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 80 146 4.5E-24 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YpsIP31758_3552 60098bfea136e6d1f25b802dba9e389f 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 3.0E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3552 60098bfea136e6d1f25b802dba9e389f 349 SUPERFAMILY SSF161098 106 337 1.02E-20 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 Pfam PF00924 Mechanosensitive ion channel 883 1081 1.1E-51 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 Gene3D G3DSA:2.30.30.60 941 990 1.1E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 SUPERFAMILY SSF82689 993 1088 3.79E-14 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 SUPERFAMILY SSF50182 926 991 9.81E-17 T 12-10-2018 IPR010920 LSM domain superfamily YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 Gene3D G3DSA:3.30.70.100 994 1086 8.2E-8 T 12-10-2018 YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 955 989 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 Pfam PF12795 Mechanosensitive ion channel porin domain 36 264 7.7E-62 T 12-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 SUPERFAMILY SSF82861 841 924 4.84E-8 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YpsIP31758_3664 60d51d7ed1fcbc9d6b28661b2e2d1c42 1113 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 486 822 2.3E-116 T 12-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 Gene3D G3DSA:3.40.190.10 43 526 1.2E-210 T 12-10-2018 YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 SUPERFAMILY SSF53850 38 527 1.03E-145 T 12-10-2018 YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 Gene3D G3DSA:3.90.76.10 73 196 1.2E-210 T 12-10-2018 YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 Gene3D G3DSA:3.10.105.10 299 514 1.2E-210 T 12-10-2018 YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 1.2E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_1960 759ed5702614bc03d76856f132b0dd61 545 PIRSF PIRSF002741 1 545 7.7E-115 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 SMART SM00829 20 334 6.0E-57 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 SUPERFAMILY SSF50129 11 149 1.08E-38 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 3.9E-150 T 12-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 Gene3D G3DSA:3.40.50.720 130 273 1.2E-105 T 12-10-2018 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 1.9E-26 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 SUPERFAMILY SSF51735 121 299 2.61E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 Gene3D G3DSA:3.90.180.10 24 334 1.2E-105 T 12-10-2018 YpsIP31758_1628 9328f4a6be81b78d9c066d6e3076002c 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 8.7E-10 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 1.1E-185 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 592 1.8E-35 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 SUPERFAMILY SSF69279 204 383 8.84E-51 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 2.4E-65 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Gene3D G3DSA:4.10.180.10 297 312 7.1E-24 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 5.1E-50 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Gene3D G3DSA:2.40.50.230 388 471 3.2E-34 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 6.4E-75 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 SUPERFAMILY SSF69255 382 472 7.32E-26 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Gene3D G3DSA:2.30.110.50 15 239 1.3E-81 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Gene3D G3DSA:2.30.110.50 294 370 7.1E-24 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 SUPERFAMILY SSF69279 22 203 4.48E-48 T 12-10-2018 YpsIP31758_2504 432354928e5ebd55ddc33df07f188089 782 Gene3D G3DSA:3.55.50.10 112 208 1.3E-81 T 12-10-2018 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.9E-19 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 8.1E-223 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SMART SM00955 189 517 2.1E-122 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SMART SM00357 23 79 1.5E-12 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Pfam PF00773 RNB domain 189 516 1.7E-85 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Gene3D G3DSA:2.40.50.140 558 644 5.2E-36 T 12-10-2018 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Gene3D G3DSA:2.40.50.640 83 155 1.2E-29 T 12-10-2018 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Pfam PF00575 S1 RNA binding domain 560 639 9.9E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SUPERFAMILY SSF50249 8 80 1.52E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.041 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SUPERFAMILY SSF50249 83 171 1.15E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SUPERFAMILY SSF50249 171 556 4.8E-115 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 Gene3D G3DSA:2.40.50.140 1 82 1.7E-30 T 12-10-2018 YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 SUPERFAMILY SSF50249 560 643 4.05E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1904 e37da217a219e4c0f4c14a57ab92009e 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 SUPERFAMILY SSF49695 24 109 1.15E-11 T 12-10-2018 IPR011024 Gamma-crystallin-like YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 Gene3D G3DSA:2.60.20.10 9 111 3.5E-17 T 12-10-2018 YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 Gene3D G3DSA:2.60.20.10 112 209 3.1E-24 T 12-10-2018 YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 SUPERFAMILY SSF55729 715 813 9.98E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 SUPERFAMILY SSF49695 103 207 9.65E-14 T 12-10-2018 IPR011024 Gamma-crystallin-like YpsIP31758_3468 7e0219e36f718543424f9ce6cb7ad13e 815 Gene3D G3DSA:3.40.630.30 702 815 1.1E-5 T 12-10-2018 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 139 4.5E-12 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.4E-46 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 PIRSF PIRSF006334 14 294 1.8E-112 T 12-10-2018 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 SUPERFAMILY SSF53927 1 149 1.07E-42 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 285 2.8E-88 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 Gene3D G3DSA:3.40.140.10 29 179 2.5E-43 T 12-10-2018 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 SUPERFAMILY SSF53927 154 290 3.96E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 51.055 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YpsIP31758_2462 7ad277d3358ebe0867566999b11fba33 294 Gene3D G3DSA:3.40.140.10 180 294 4.8E-28 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 8.4E-44 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.6E-6 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.6E-6 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 SUPERFAMILY SSF52317 3 190 4.01E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 7.0E-14 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 7.0E-14 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 7.0E-14 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 Gene3D G3DSA:3.40.50.880 1 192 5.1E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.1E-36 T 12-10-2018 YpsIP31758_1933 ee1dcdc0482a4740359c80b115538d49 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 2.9E-55 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.7E-26 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 1007 1242 2.7E-92 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.32 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.2E-57 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 157 270 5.9E-28 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 3.5E-16 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 239 1.4E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.150 833 955 3.1E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.100 714 788 8.0E-32 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.4E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 442 624 1.9E-70 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.6E-49 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.4E-160 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 642 713 4.8E-21 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 12-10-2018 YpsIP31758_3860 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 317 441 3.5E-36 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3315 66c1f41e6e3a7ecc3c45187d1719b1f5 195 SUPERFAMILY SSF49329 44 195 1.06E-49 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 YpsIP31758_3315 66c1f41e6e3a7ecc3c45187d1719b1f5 195 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 183 194 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 YpsIP31758_3315 66c1f41e6e3a7ecc3c45187d1719b1f5 195 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 54 194 1.3E-30 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 YpsIP31758_3315 66c1f41e6e3a7ecc3c45187d1719b1f5 195 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 86 96 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 YpsIP31758_3315 66c1f41e6e3a7ecc3c45187d1719b1f5 195 Gene3D G3DSA:2.60.40.200 41 195 5.1E-55 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 YpsIP31758_1646 89d3c26a612b93f78aaf8b52f795972f 129 SMART SM00448 6 120 7.7E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1646 89d3c26a612b93f78aaf8b52f795972f 129 Gene3D G3DSA:3.40.50.2300 2 129 1.5E-38 T 12-10-2018 YpsIP31758_1646 89d3c26a612b93f78aaf8b52f795972f 129 Pfam PF00072 Response regulator receiver domain 9 120 9.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1646 89d3c26a612b93f78aaf8b52f795972f 129 SUPERFAMILY SSF52172 5 125 1.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2377 f87d65179bb2df79c77896975bfe3db9 257 SUPERFAMILY SSF64438 20 193 1.48E-47 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic YpsIP31758_2377 f87d65179bb2df79c77896975bfe3db9 257 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 39 193 1.1E-42 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YpsIP31758_2377 f87d65179bb2df79c77896975bfe3db9 257 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 192 1.4E-45 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YpsIP31758_2377 f87d65179bb2df79c77896975bfe3db9 257 Gene3D G3DSA:3.60.140.10 20 199 1.4E-48 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 8.5E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 Pfam PF00005 ABC transporter 23 182 3.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 SMART SM00382 31 231 8.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 SUPERFAMILY SSF52540 5 253 1.78E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0247 2ca23ea286ae5e2ca8c74c5c655ef564 255 Gene3D G3DSA:3.40.50.300 5 253 1.4E-61 T 12-10-2018 YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.20.120.530 102 229 4.4E-23 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF48008 107 223 6.28E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00345 18 77 9.3E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 4.1E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00895 106 227 5.0E-17 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.10.10.10 1 79 3.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.6E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.6E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF07729 FCD domain 110 222 1.0E-21 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_0011 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF46785 10 81 1.25E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2071 6ea173bd679e4c8409a08dfc97cd0ebe 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 2.1E-45 T 12-10-2018 IPR019698 Protein of unknown function DUF2583 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Gene3D G3DSA:1.10.3810.10 206 409 2.4E-263 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Pfam PF00912 Transglycosylase 214 385 5.0E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Gene3D G3DSA:3.40.710.10 108 766 2.4E-263 T 12-10-2018 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 SUPERFAMILY SSF56601 367 782 1.01E-105 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Gene3D G3DSA:1.20.5.100 60 101 9.7E-19 T 12-10-2018 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 83 1.8E-32 T 12-10-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 SUPERFAMILY SSF53955 201 408 1.6E-65 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Pfam PF00905 Penicillin binding protein transpeptidase domain 478 717 2.0E-20 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 PIRSF PIRSF002799 41 826 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Gene3D G3DSA:3.30.2060.10 116 205 2.4E-263 T 12-10-2018 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 73 800 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3334 fc16c11446c38d8d9465f670082215aa 826 Pfam PF14814 Bifunctional transglycosylase second domain 118 202 2.3E-29 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 Gene3D G3DSA:2.20.28.120 1 55 2.0E-31 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 SUPERFAMILY SSF57829 1 53 2.87E-20 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.3E-27 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0063 05af4319c94097504f8cddb53d47f552 55 Pfam PF00471 Ribosomal protein L33 7 53 7.3E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 576 793 7.23E-51 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.4E-65 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:1.10.287.1150 84 166 3.7E-30 T 12-10-2018 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.11610 723 929 6.3E-172 T 12-10-2018 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 120 541 3.2E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SMART SM00861 593 786 9.2E-62 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 9.2E-53 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.970 167 533 4.1E-148 T 12-10-2018 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.8E-16 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PIRSF PIRSF000157 1 934 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.12470 556 802 6.3E-172 T 12-10-2018 YpsIP31758_2881 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF00676 Dehydrogenase E1 component 223 514 1.2E-50 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 YpsIP31758_0062 698270ae59188f8d755aff7ecd13ae45 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.332 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0062 698270ae59188f8d755aff7ecd13ae45 78 Pfam PF00830 Ribosomal L28 family 3 62 6.5E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0062 698270ae59188f8d755aff7ecd13ae45 78 SUPERFAMILY SSF143800 1 77 2.94E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0062 698270ae59188f8d755aff7ecd13ae45 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 4.1E-29 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0062 698270ae59188f8d755aff7ecd13ae45 78 Gene3D G3DSA:2.30.170.40 2 78 3.3E-33 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 Gene3D G3DSA:1.10.10.10 4 93 4.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.8E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 SUPERFAMILY SSF46785 6 84 3.21E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0417 5b3cfda6ed4936b0cc9a61ceb2fd57e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 Gene3D G3DSA:1.25.40.10 180 345 1.5E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 Gene3D G3DSA:1.25.40.10 39 179 6.9E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 180 213 40.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 69 102 64.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 107 140 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 282 315 350.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SMART SM00028 214 247 0.61 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 Pfam PF13432 Tetratricopeptide repeat 185 243 0.0022 T 12-10-2018 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SUPERFAMILY SSF48452 110 279 3.79E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.836 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 YpsIP31758_1915 1e86bf14c13f9706f0177f218b357f09 389 SUPERFAMILY SSF48452 42 138 1.39E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF55252 82 151 2.88E-18 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 1.7E-45 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.4E-25 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 8.1E-21 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:3.30.1360.40 79 156 1.0E-29 T 12-10-2018 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:1.10.10.10 1 78 1.1E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-31 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 YpsIP31758_3617 bb5f92968a2333c97a258788359e8563 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.096 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 SUPERFAMILY SSF51905 461 651 8.1E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.6E-12 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 3.6E-12 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 3.6E-12 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 635 5.7E-22 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 SUPERFAMILY SSF51395 3 363 1.47E-111 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 Gene3D G3DSA:3.40.50.720 376 667 3.7E-119 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 SUPERFAMILY SSF51971 334 519 3.18E-41 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 Gene3D G3DSA:3.20.20.70 3 369 2.2E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.3E-89 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.4E-5 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.4E-5 T 12-10-2018 YpsIP31758_0501 1a94b1fb5058146f0a6ba06995dd5b8a 673 Gene3D G3DSA:3.50.50.60 470 626 3.7E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3971 b07319b306a95336b07bbca9923c0974 298 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 4.4E-18 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM YpsIP31758_3971 b07319b306a95336b07bbca9923c0974 298 Gene3D G3DSA:3.30.1490.300 82 137 1.8E-12 T 12-10-2018 YpsIP31758_3971 b07319b306a95336b07bbca9923c0974 298 Gene3D G3DSA:3.30.420.40 8 168 1.8E-12 T 12-10-2018 YpsIP31758_3971 b07319b306a95336b07bbca9923c0974 298 SUPERFAMILY SSF53067 29 165 2.85E-6 T 12-10-2018 YpsIP31758_0522 24dddbc7d9b028dd2407869bf99c023f 761 SUPERFAMILY SSF103515 454 761 6.8E-35 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0522 24dddbc7d9b028dd2407869bf99c023f 761 Pfam PF03797 Autotransporter beta-domain 488 739 7.9E-23 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0522 24dddbc7d9b028dd2407869bf99c023f 761 Gene3D G3DSA:2.40.128.130 487 761 3.1E-19 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0522 24dddbc7d9b028dd2407869bf99c023f 761 SMART SM00869 484 751 5.8E-25 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_3158 33aa60c3c3bf417ae31f96db8dd5d67b 310 Gene3D G3DSA:3.20.20.190 8 310 8.1E-34 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_3158 33aa60c3c3bf417ae31f96db8dd5d67b 310 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 27 296 3.2E-17 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YpsIP31758_3158 33aa60c3c3bf417ae31f96db8dd5d67b 310 SUPERFAMILY SSF51695 20 302 2.38E-44 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_1092 db1047a61ae4d80e1e84d1aec7a5a17a 453 PIRSF PIRSF006351 1 446 1.9E-126 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YpsIP31758_1092 db1047a61ae4d80e1e84d1aec7a5a17a 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 2.9E-44 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_1092 db1047a61ae4d80e1e84d1aec7a5a17a 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 438 4.6E-155 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YpsIP31758_1092 db1047a61ae4d80e1e84d1aec7a5a17a 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 438 4.6E-155 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 Gene3D G3DSA:3.40.50.300 4 230 2.2E-66 T 12-10-2018 YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 Pfam PF00005 ABC transporter 26 174 9.0E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 6.0E-110 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 SUPERFAMILY SSF52540 6 226 6.34E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1601 c389437d5dc8354c03c2a392c4a25074 234 SMART SM00382 35 230 5.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2488 a822b304de3f652474d0d057ff711942 361 Pfam PF06996 Type VI secretion, TssG 22 319 1.9E-78 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_2488 a822b304de3f652474d0d057ff711942 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 319 3.1E-68 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 19.774 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 SUPERFAMILY SSF81301 10 286 1.21E-93 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 SUPERFAMILY SSF81301 526 813 1.01E-87 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:1.20.120.330 285 440 6.1E-58 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:3.30.460.10 112 284 3.9E-67 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:1.10.4050.10 1 110 5.1E-32 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:1.20.120.1510 450 561 4.6E-31 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 SUPERFAMILY SSF81593 287 436 5.49E-45 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:3.30.460.100 562 811 1.4E-98 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 SUPERFAMILY SSF81593 815 943 7.53E-34 T 12-10-2018 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 1.5E-95 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 3.0E-98 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 5.9E-48 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Pfam PF08335 GlnD PII-uridylyltransferase 825 919 2.1E-10 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YpsIP31758_0563 331a8fbcdf38f488acb9f9d66155b592 951 Gene3D G3DSA:1.20.120.330 812 946 4.3E-47 T 12-10-2018 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 Pfam PF00480 ROK family 89 392 5.2E-89 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 Pfam PF01047 MarR family 25 63 1.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:1.10.10.10 5 81 3.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:3.30.420.40 210 378 6.3E-90 T 12-10-2018 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 SUPERFAMILY SSF53067 88 394 1.82E-55 T 12-10-2018 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 SUPERFAMILY SSF46785 14 79 1.48E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 ProSitePatterns PS01125 ROK family signature. 220 247 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_2911 30061104628cf8509e857c81c1d5129c 408 Gene3D G3DSA:3.30.420.40 93 386 6.3E-90 T 12-10-2018 YpsIP31758_0168 d3fb6039c5db2fa440c25ea4c92ca075 425 Gene3D G3DSA:2.60.40.1090 253 423 6.9E-10 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_0168 d3fb6039c5db2fa440c25ea4c92ca075 425 PIRSF PIRSF029766 5 425 9.4E-186 T 12-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 YpsIP31758_0168 d3fb6039c5db2fa440c25ea4c92ca075 425 Pfam PF00419 Fimbrial protein 246 425 2.5E-29 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_0168 d3fb6039c5db2fa440c25ea4c92ca075 425 SUPERFAMILY SSF49401 255 423 5.97E-11 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Gene3D G3DSA:4.10.520.10 1 98 7.5E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.046 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SUPERFAMILY SSF47729 3 92 2.21E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.9E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.4E-53 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SMART SM00411 3 92 2.2E-42 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_1718 d0a1162ac8bd49845a74ad5bc8fc2a32 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YpsIP31758_1329 840205d73be1228be5d8a39133c64674 329 Gene3D G3DSA:3.20.20.100 15 329 2.3E-118 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_1329 840205d73be1228be5d8a39133c64674 329 Pfam PF00248 Aldo/keto reductase family 28 328 9.2E-68 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_1329 840205d73be1228be5d8a39133c64674 329 SUPERFAMILY SSF51430 13 327 1.7E-87 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 197 385 2.7E-6 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 17 392 46.604 T 12-10-2018 IPR019936 Mutatrotase, YjhT-like YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 SUPERFAMILY SSF117281 55 381 4.84E-30 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 38 385 1.6E-153 T 12-10-2018 IPR019936 Mutatrotase, YjhT-like YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 23 183 1.5E-15 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 YpsIP31758_2260 61ae347a80600f80494e91c7776f6469 392 Pfam PF01344 Kelch motif 91 140 1.5E-9 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Gene3D G3DSA:3.40.50.300 140 313 4.8E-60 T 12-10-2018 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Gene3D G3DSA:1.10.10.60 403 454 1.9E-15 T 12-10-2018 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Gene3D G3DSA:3.40.50.2300 1 139 2.4E-42 T 12-10-2018 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 SMART SM00448 6 117 1.7E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Pfam PF00072 Response regulator receiver domain 8 115 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 SUPERFAMILY SSF52172 4 187 3.42E-50 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 SUPERFAMILY SSF52540 142 385 4.14E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 2.5E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 454 2.5E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 SUPERFAMILY SSF46689 356 452 3.08E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Pfam PF00158 Sigma-54 interaction domain 143 309 7.9E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Pfam PF02954 Bacterial regulatory protein, Fis family 413 452 1.1E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 Gene3D G3DSA:1.10.8.60 314 392 1.2E-30 T 12-10-2018 YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 SMART SM00382 163 306 5.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2820 75a7acb4afd09b368ce5522dbbc1d7b1 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.926 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 Gene3D G3DSA:1.10.3080.10 31 473 2.0E-152 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 SUPERFAMILY SSF81340 23 453 8.5E-110 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 Pfam PF00654 Voltage gated chloride channel 90 437 3.5E-89 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 PRINTS PR00762 Chloride channel signature 102 119 5.5E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 PRINTS PR00762 Chloride channel signature 352 372 5.5E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 PRINTS PR00762 Chloride channel signature 387 403 5.5E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 PRINTS PR00762 Chloride channel signature 405 424 5.5E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_3329 f9dd519cba58a0ef7eef4092dbff1f71 478 PRINTS PR00762 Chloride channel signature 183 202 5.5E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.450.20 152 266 1.8E-19 T 12-10-2018 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.970 1 89 1.7E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF01627 Hpt domain 686 769 8.5E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 12-10-2018 IPR000014 PAS domain YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 5.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47226 661 773 7.98E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00091 155 221 4.9E-8 T 12-10-2018 IPR000014 PAS domain YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 3.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 3.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55874 336 505 7.2E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.130 267 345 2.3E-21 T 12-10-2018 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.20.120.160 656 778 1.8E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00073 675 772 1.0E-16 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00387 394 507 3.1E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.565.10 348 509 7.2E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47384 269 347 9.42E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00448 525 638 3.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00989 PAS fold 157 266 2.6E-17 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.40.50.2300 510 646 1.8E-33 T 12-10-2018 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00072 Response regulator receiver domain 527 638 8.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00388 282 347 5.6E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF52172 525 648 3.42E-30 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 8.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0469 9fdec9ada19f03f6bff0e2f283122f02 778 PIRSF PIRSF003182 1 778 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Gene3D G3DSA:1.10.287.180 2 77 1.1E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 SUPERFAMILY SSF46557 4 79 5.36E-26 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 2.2E-71 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Gene3D G3DSA:3.10.50.30 79 158 1.4E-32 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.892 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 SUPERFAMILY SSF54534 81 156 5.1E-24 T 12-10-2018 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.74 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.3E-23 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.9E-27 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YpsIP31758_3981 f5eb6c4bc6effaa4c0879c5e3eb03e56 171 PIRSF PIRSF006092 1 158 3.4E-62 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YpsIP31758_1704 379838de1622bbfd1edf1f50031b71fd 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1704 379838de1622bbfd1edf1f50031b71fd 296 SMART SM00382 36 222 9.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1704 379838de1622bbfd1edf1f50031b71fd 296 Pfam PF00005 ABC transporter 29 174 4.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1704 379838de1622bbfd1edf1f50031b71fd 296 SUPERFAMILY SSF52540 5 237 6.25E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1704 379838de1622bbfd1edf1f50031b71fd 296 Gene3D G3DSA:3.40.50.300 9 249 2.7E-58 T 12-10-2018 YpsIP31758_2636 f7a72c147559f63dbf34bd7e2803f270 308 Pfam PF01145 SPFH domain / Band 7 family 35 210 6.3E-25 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_2636 f7a72c147559f63dbf34bd7e2803f270 308 SMART SM00244 31 194 0.003 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_2636 f7a72c147559f63dbf34bd7e2803f270 308 SUPERFAMILY SSF117892 62 198 1.31E-13 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily YpsIP31758_2636 f7a72c147559f63dbf34bd7e2803f270 308 Gene3D G3DSA:3.30.479.30 59 196 1.1E-6 T 12-10-2018 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.7E-22 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 SUPERFAMILY SSF52540 4 168 4.02E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 Pfam PF02421 Ferrous iron transport protein B 5 163 2.6E-65 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 161 1.0E-11 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 Pfam PF07670 Nucleoside recognition 354 444 8.8E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 Pfam PF07670 Nucleoside recognition 513 690 1.9E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 Gene3D G3DSA:3.40.50.300 1 169 2.0E-48 T 12-10-2018 YpsIP31758_3985 2ffeb2e51558e80dd148891f4237f19e 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.3E-226 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 61 81 7.5E-6 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 26 51 7.5E-6 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 5 20 7.5E-6 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 Gene3D G3DSA:3.30.70.100 1 91 8.9E-31 T 12-10-2018 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 SUPERFAMILY SSF54975 3 92 6.11E-30 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.225 T 12-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 Pfam PF00708 Acylphosphatase 8 90 7.3E-26 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_2530 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YpsIP31758_1688 e2afff79b72f8a2c9235b929d37cc9ff 430 SUPERFAMILY SSF53850 26 427 9.32E-64 T 12-10-2018 YpsIP31758_1688 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 30 373 4.4E-162 T 12-10-2018 YpsIP31758_1688 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 139 415 4.4E-162 T 12-10-2018 YpsIP31758_1688 e2afff79b72f8a2c9235b929d37cc9ff 430 Pfam PF01547 Bacterial extracellular solute-binding protein 47 333 7.4E-25 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:1.10.10.10 1 84 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:3.40.190.290 89 290 1.9E-45 T 12-10-2018 YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF03466 LysR substrate binding domain 89 289 7.2E-48 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF46785 2 109 3.97E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2672 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF53850 89 289 3.75E-47 T 12-10-2018 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 3.0E-45 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Pfam PF13549 ATP-grasp domain 472 694 6.0E-73 T 12-10-2018 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SUPERFAMILY SSF56059 481 692 7.95E-26 T 12-10-2018 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SMART SM00881 9 104 8.8E-22 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.30.470.20 479 690 1.8E-55 T 12-10-2018 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SUPERFAMILY SSF55729 614 866 2.4E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.40.630.30 717 880 5.7E-42 T 12-10-2018 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.40.50.261 285 455 9.7E-44 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SUPERFAMILY SSF51735 2 136 2.03E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SUPERFAMILY SSF52210 287 447 6.8E-38 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Pfam PF13380 CoA binding domain 13 129 1.5E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 SUPERFAMILY SSF52210 125 286 7.06E-37 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.30.1490.20 499 576 1.8E-55 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.40.50.261 131 283 1.2E-47 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Pfam PF00583 Acetyltransferase (GNAT) family 761 863 2.2E-12 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_3206 347a23c45495586dcdb32bb3a53ddfbf 880 Gene3D G3DSA:3.40.50.720 2 130 1.6E-29 T 12-10-2018 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.10.275.10 6 142 9.8E-59 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 Pfam PF00206 Lyase 13 345 1.0E-106 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 SUPERFAMILY SSF48557 2 458 5.45E-142 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 12-10-2018 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 12-10-2018 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 12-10-2018 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 7.1E-264 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.2E-27 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.2E-27 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.2E-27 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.2E-27 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.20.200.10 143 410 1.7E-113 T 12-10-2018 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YpsIP31758_3678 a011ea4e410c777c0fcecc89ac979e22 478 Gene3D G3DSA:1.10.40.30 411 460 2.4E-29 T 12-10-2018 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.30.300.20 187 303 1.7E-43 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF54814 183 298 2.42E-42 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF52540 12 206 2.39E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.40.50.300 3 185 1.2E-50 T 12-10-2018 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF07650 KH domain 210 286 2.4E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 8.5E-41 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 281 7.7E-118 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.9E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_1137 d46e1d42bae8741a68fa3277ad8acd3e 303 Hamap MF_00367 GTPase Era [era]. 7 298 35.886 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 Gene3D G3DSA:3.40.50.300 2 279 6.9E-57 T 12-10-2018 YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 Gene3D G3DSA:3.40.50.300 282 530 2.8E-56 T 12-10-2018 YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 Pfam PF12848 ABC transporter 224 309 1.8E-20 T 12-10-2018 IPR032781 ABC-transporter extension domain YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 Pfam PF00005 ABC transporter 18 184 1.6E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 SUPERFAMILY SSF52540 6 237 3.1E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 SUPERFAMILY SSF52540 298 523 5.97E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 SMART SM00382 344 513 3.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 SMART SM00382 26 228 6.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2483 e6376af18fba6b51e811586091899294 531 Pfam PF00005 ABC transporter 336 467 4.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2679 17528658ccdf6a4f3106a0c23184e436 162 ProDom PD022058 PSAF MYFF 1 162 2.0E-89 T 12-10-2018 IPR035182 Protein of unknown function PsaF YpsIP31758_2679 17528658ccdf6a4f3106a0c23184e436 162 Pfam PF17550 Family of unknown function 1 162 5.3E-113 T 12-10-2018 IPR035182 Protein of unknown function PsaF YpsIP31758_1762 55f391cf91c1fec2f03a88caf6e7eb1d 365 Gene3D G3DSA:3.20.20.70 3 365 5.0E-143 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1762 55f391cf91c1fec2f03a88caf6e7eb1d 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 1.8E-93 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YpsIP31758_1762 55f391cf91c1fec2f03a88caf6e7eb1d 365 SUPERFAMILY SSF51395 1 365 4.45E-125 T 12-10-2018 YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 7.1E-24 T 12-10-2018 YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 2.3E-87 T 12-10-2018 YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:1.10.150.210 121 183 1.4E-116 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 SUPERFAMILY SSF56784 112 316 1.11E-48 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:3.40.50.1000 107 316 1.4E-116 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 146 282 8.6E-17 T 12-10-2018 YpsIP31758_3493 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:3.30.70.2020 38 320 1.4E-116 T 12-10-2018 YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 PRINTS PR01032 Gene IV protein signature 319 347 2.0E-5 T 12-10-2018 YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 PRINTS PR01032 Gene IV protein signature 211 234 2.0E-5 T 12-10-2018 YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 PRINTS PR01032 Gene IV protein signature 372 394 2.0E-5 T 12-10-2018 YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 Pfam PF13629 Pilus formation protein N terminal region 32 102 2.8E-13 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 185 195 2.1E-6 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 356 374 2.1E-6 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0601 689f8dff668c2c29646578e7615d44a8 439 Pfam PF00263 Bacterial type II and III secretion system protein 236 391 1.9E-37 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:1.10.287.690 470 515 3.2E-25 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 SUPERFAMILY SSF53098 5 394 6.17E-91 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 SUPERFAMILY SSF56672 390 783 6.12E-117 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 209 301 2.6E-5 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 165 1.4E-4 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:3.90.1600.10 353 460 4.6E-30 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:3.90.1600.30 516 642 1.9E-9 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Pfam PF00136 DNA polymerase family B 383 742 6.1E-41 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:1.10.132.60 645 789 3.0E-61 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:2.40.50.590 7 151 1.4E-57 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:3.30.70.2250 42 108 1.4E-57 T 12-10-2018 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 Gene3D G3DSA:3.30.420.10 154 352 1.6E-72 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 7.2E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 7.2E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 7.2E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3418 fe0de3fc8162b134b2d23e82cbc89964 789 SMART SM00486 151 560 4.0E-61 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 SUPERFAMILY SSF53335 5 204 9.58E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Gene3D G3DSA:3.40.50.150 1 206 7.9E-71 T 12-10-2018 YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 2.9E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PIRSF PIRSF003078 1 206 6.1E-61 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.589 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YpsIP31758_4184 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 5.5E-62 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 78 526 1.7E-222 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Pfam PF00364 Biotin-requiring enzyme 106 175 2.7E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Pfam PF00364 Biotin-requiring enzyme 4 73 1.3E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Gene3D G3DSA:4.10.320.10 223 268 6.7E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Pfam PF02817 e3 binding domain 223 258 1.1E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 295 525 2.7E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 SUPERFAMILY SSF51230 1 93 4.06E-23 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Gene3D G3DSA:2.40.50.100 103 182 5.7E-21 T 12-10-2018 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Gene3D G3DSA:2.40.50.100 1 79 2.0E-21 T 12-10-2018 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 SUPERFAMILY SSF47005 217 262 4.32E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 SUPERFAMILY SSF52777 284 525 2.18E-80 T 12-10-2018 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 Gene3D G3DSA:3.30.559.10 278 526 1.6E-100 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 SUPERFAMILY SSF51230 105 196 3.4E-23 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_3362 c71ea5e3818c63fc9fb98115415b8c27 526 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 40 502 5.0E-186 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 Pfam PF03958 Bacterial type II/III secretion system short domain 187 279 8.6E-19 T 12-10-2018 IPR005644 NolW-like YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 Gene3D G3DSA:3.55.50.30 29 111 6.7E-23 T 12-10-2018 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 Gene3D G3DSA:3.30.1370.120 183 277 1.3E-12 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 355 374 7.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 199 216 7.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 281 301 7.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 389 404 7.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 480 499 7.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 447 480 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 Pfam PF00263 Bacterial type II and III secretion system protein 342 498 2.8E-35 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_3830 7348f0b85b06d02530273b4bbe038520 505 Gene3D G3DSA:3.30.1370.120 113 180 1.7E-24 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 Pfam PF13378 Enolase C-terminal domain-like 201 414 2.6E-56 T 12-10-2018 IPR029065 Enolase C-terminal domain-like YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF54826 4 138 4.77E-37 T 12-10-2018 YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF51604 183 423 2.49E-69 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.30.390.10 1 130 8.7E-58 T 12-10-2018 IPR029017 Enolase-like, N-terminal YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.20.20.120 131 425 4.1E-110 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 SMART SM00922 198 294 6.0E-22 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 244 275 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YpsIP31758_2410 36dd236122be9428c17ec2583c0f7294 425 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 135 5.7E-5 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 Gene3D G3DSA:3.40.640.10 36 297 4.5E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 72.697 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 5.2E-180 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 Pfam PF00266 Aminotransferase class-V 25 394 1.9E-158 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 Gene3D G3DSA:3.90.1150.10 8 398 4.5E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YpsIP31758_1745 68c16d0c094a28f7ffbcff468f4f8e38 406 SUPERFAMILY SSF53383 4 401 5.71E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Gene3D G3DSA:3.30.70.20 5 161 1.3E-25 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Gene3D G3DSA:1.10.1060.10 208 342 4.7E-32 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 SUPERFAMILY SSF51971 344 599 2.59E-66 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Pfam PF13247 4Fe-4S dicluster domain 55 153 4.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 PRINTS PR00419 Adrenodoxin reductase family signature 522 535 2.3E-35 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 PRINTS PR00419 Adrenodoxin reductase family signature 488 502 2.3E-35 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 PRINTS PR00419 Adrenodoxin reductase family signature 369 382 2.3E-35 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 PRINTS PR00419 Adrenodoxin reductase family signature 411 421 2.3E-35 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 PRINTS PR00419 Adrenodoxin reductase family signature 346 368 2.3E-35 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 207 670 2.8E-238 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 SUPERFAMILY SSF54862 2 307 2.34E-44 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Gene3D G3DSA:3.50.50.60 444 598 2.2E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Gene3D G3DSA:3.30.70.20 62 127 1.3E-25 T 12-10-2018 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Gene3D G3DSA:3.50.50.60 343 409 1.5E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 345 657 1.1E-17 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_3684 91084cb65d8d6b9b98c5775e0d818794 671 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 222 331 2.8E-35 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 SUPERFAMILY SSF50494 3 303 2.65E-64 T 12-10-2018 IPR009003 Peptidase S1, PA clan YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Pfam PF13365 Trypsin-like peptidase domain 119 255 2.5E-32 T 12-10-2018 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Gene3D G3DSA:2.40.10.120 38 288 2.2E-83 T 12-10-2018 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 400 470 3.9E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Gene3D G3DSA:2.30.42.10 392 481 9.1E-29 T 12-10-2018 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Gene3D G3DSA:2.30.42.10 292 391 1.5E-26 T 12-10-2018 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 SMART SM00228 401 473 5.1E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 SMART SM00228 294 376 5.5E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 5.0E-60 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 SUPERFAMILY SSF50156 276 384 1.73E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 Pfam PF13180 PDZ domain 296 385 9.0E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 SUPERFAMILY SSF50156 412 477 3.81E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_3323 9dd675d2c3c0508c9c68c29fada773a0 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 479 1.3E-163 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SUPERFAMILY SSF55785 24 136 1.61E-19 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 691 2.9E-42 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 688 5.3E-44 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Gene3D G3DSA:3.30.70.270 521 693 2.7E-52 T 12-10-2018 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Pfam PF00989 PAS fold 403 518 6.8E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Gene3D G3DSA:3.30.450.20 395 519 1.1E-22 T 12-10-2018 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00086 85 127 7.1 T 12-10-2018 IPR001610 PAC motif YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00086 479 521 54.0 T 12-10-2018 IPR001610 PAC motif YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00086 341 383 0.021 T 12-10-2018 IPR001610 PAC motif YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00086 213 255 0.33 T 12-10-2018 IPR001610 PAC motif YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SUPERFAMILY SSF55073 537 690 2.28E-44 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SUPERFAMILY SSF55785 251 377 1.92E-25 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 528 5.0E-15 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 2.9E-16 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 262 8.2E-21 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 7.0E-17 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Pfam PF13426 PAS domain 24 126 8.9E-11 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Pfam PF13426 PAS domain 151 254 1.6E-13 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Pfam PF13426 PAS domain 279 382 2.3E-9 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SUPERFAMILY SSF55785 380 519 2.79E-20 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SUPERFAMILY SSF55785 123 250 1.74E-24 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00267 521 692 8.8E-54 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Gene3D G3DSA:3.30.450.20 8 140 4.9E-24 T 12-10-2018 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00091 139 208 6.4E-4 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00091 11 80 5.7E-5 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00091 402 468 1.3E-8 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 SMART SM00091 267 335 1.2 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Gene3D G3DSA:3.30.450.20 141 266 9.0E-27 T 12-10-2018 YpsIP31758_2374 ce6005242a8c4fb8eb20689c98558b4d 693 Gene3D G3DSA:3.30.450.20 267 394 6.4E-24 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 113.937 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03764 Elongation factor G, domain IV 486 607 1.3E-48 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.240 613 683 1.5E-89 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF52540 6 287 2.97E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.40.50.300 1 303 3.8E-116 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:2.40.30.10 304 411 1.8E-44 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.870 412 487 1.3E-32 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 6.4E-67 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.230.10 491 695 1.5E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF14492 Elongation Factor G, domain II 411 485 9.8E-34 T 12-10-2018 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00838 609 696 2.3E-58 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54211 486 608 7.84E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 409 487 1.73E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF50447 271 411 1.63E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.6E-32 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00889 487 607 7.2E-76 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.9E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3919 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 SMART SM01007 11 239 3.1E-34 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 5.0E-143 T 12-10-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 Gene3D G3DSA:3.40.225.10 1 274 7.9E-88 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 58.563 T 12-10-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 SUPERFAMILY SSF53639 1 270 4.51E-75 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3757 6aca53d297a52d5a5a514602f522c72a 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.2E-39 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:1.10.1220.10 11 52 2.1E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.20.20.220 221 611 6.5E-161 T 12-10-2018 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF01619 Proline dehydrogenase 271 570 6.4E-100 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF47598 4 45 2.67E-10 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 1.8E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Pfam PF00171 Aldehyde dehydrogenase family 659 1107 1.1E-114 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF81935 89 262 1.1E-65 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 911 922 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF51730 263 618 2.31E-123 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 PIRSF PIRSF000197 75 1323 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.40.309.10 886 1083 7.6E-145 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:3.40.605.10 636 1114 7.6E-145 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1114 3.4E-250 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 SUPERFAMILY SSF53720 635 1113 1.96E-129 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 Gene3D G3DSA:1.20.5.550 88 139 1.4E-29 T 12-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 YpsIP31758_2268 cba988cf8a17ce39b3a7892c6236e1e7 1323 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 883 890 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF55874 281 446 9.56E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 Gene3D G3DSA:1.10.287.130 176 292 2.3E-29 T 12-10-2018 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF47384 212 291 2.16E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SUPERFAMILY SSF158472 173 225 5.23E-8 T 12-10-2018 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 8.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00388 228 291 7.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00304 172 227 3.7E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 445 7.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 Pfam PF00672 HAMP domain 173 224 3.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 SMART SM00387 338 448 9.9E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1314 d2ea51cf60021ea5b282f5de37f8ddbe 449 Gene3D G3DSA:3.30.565.10 296 448 1.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 51 59 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 SUPERFAMILY SSF56925 29 179 7.06E-33 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 2.9E-36 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 2.9E-36 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 50 62 2.9E-36 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 167 178 2.9E-36 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 Pfam PF13505 Outer membrane protein beta-barrel domain 11 179 6.0E-34 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 Gene3D G3DSA:2.40.160.20 23 179 6.0E-66 T 12-10-2018 YpsIP31758_1160 8ad15fb36d3e5d5e101172f9997f5b74 179 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 171 179 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1660 2131f33d8f4e441a4d982231b27e80cb 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 78 3.0E-39 T 12-10-2018 IPR009950 Protein of unknown function DUF1480 YpsIP31758_1660 2131f33d8f4e441a4d982231b27e80cb 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 2.5E-43 T 12-10-2018 IPR009950 Protein of unknown function DUF1480 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF50615 1 75 2.56E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:2.40.10.170 2 75 9.0E-31 T 12-10-2018 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:3.40.50.300 76 344 3.3E-113 T 12-10-2018 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 SMART SM00382 142 405 1.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.4E-262 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.822 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 3.8E-63 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:1.10.1140.10 345 460 4.4E-60 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.8E-21 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 12-10-2018 YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF52540 77 348 1.24E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4176 2b32ffa9c31bb7bae135c232a781652c 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_2059 0f9a582b0b2b82c20448fe45cadc44fc 360 Gene3D G3DSA:3.40.190.10 141 281 7.3E-30 T 12-10-2018 YpsIP31758_2059 0f9a582b0b2b82c20448fe45cadc44fc 360 Pfam PF13416 Bacterial extracellular solute-binding protein 54 331 9.3E-29 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_2059 0f9a582b0b2b82c20448fe45cadc44fc 360 SUPERFAMILY SSF53850 34 338 3.46E-41 T 12-10-2018 YpsIP31758_2059 0f9a582b0b2b82c20448fe45cadc44fc 360 Gene3D G3DSA:3.40.190.10 52 330 7.3E-30 T 12-10-2018 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Gene3D G3DSA:3.40.50.10260 15 224 2.8E-54 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 SUPERFAMILY SSF53613 232 499 2.12E-76 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 219 8.1E-49 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 PIRSF PIRSF017184 15 504 2.2E-142 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.2E-39 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 SUPERFAMILY SSF64153 16 256 5.36E-60 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Pfam PF01256 Carbohydrate kinase 258 495 1.2E-68 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.456 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 9.3E-82 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Gene3D G3DSA:3.40.1190.20 226 500 4.4E-87 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_3658 db0f7d482f04d2281bbc4a3ae91e2365 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.349 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.84 T 12-10-2018 IPR007376 dsDNA mimic, putative YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 SUPERFAMILY SSF102816 1 107 5.62E-52 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 PIRSF PIRSF004916 1 107 5.7E-56 T 12-10-2018 IPR007376 dsDNA mimic, putative YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 3.7E-47 T 12-10-2018 IPR007376 dsDNA mimic, putative YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 Gene3D G3DSA:3.10.450.140 7 107 4.2E-43 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily YpsIP31758_1954 04529ee1c09dd2452fd95493b1d545b0 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 1.0E-53 T 12-10-2018 IPR007376 dsDNA mimic, putative YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 PIRSF PIRSF001399 3 149 5.8E-59 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.394 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 2.0E-71 T 12-10-2018 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 SUPERFAMILY SSF52304 6 148 1.1E-61 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.9E-61 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 Gene3D G3DSA:3.40.50.9100 1 150 1.2E-68 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0393 1c143fe2d9eb4b7125ff233bac97f673 150 Pfam PF01220 Dehydroquinase class II 7 142 6.2E-61 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YpsIP31758_0820 08841e7b79709d82251e5c3c6f00685b 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.17 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 YpsIP31758_0820 08841e7b79709d82251e5c3c6f00685b 239 SUPERFAMILY SSF53335 18 237 5.84E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0820 08841e7b79709d82251e5c3c6f00685b 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.8E-71 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 YpsIP31758_0820 08841e7b79709d82251e5c3c6f00685b 239 Gene3D G3DSA:3.40.50.150 30 239 5.2E-72 T 12-10-2018 YpsIP31758_0820 08841e7b79709d82251e5c3c6f00685b 239 Pfam PF02390 Putative methyltransferase 64 233 1.8E-60 T 12-10-2018 YpsIP31758_1219 c94fae58dd3439ebce125485ae26edd2 342 Gene3D G3DSA:3.40.190.10 25 320 5.7E-109 T 12-10-2018 YpsIP31758_1219 c94fae58dd3439ebce125485ae26edd2 342 SUPERFAMILY SSF53850 21 339 1.28E-60 T 12-10-2018 YpsIP31758_1219 c94fae58dd3439ebce125485ae26edd2 342 Pfam PF13416 Bacterial extracellular solute-binding protein 42 306 1.0E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_1219 c94fae58dd3439ebce125485ae26edd2 342 Gene3D G3DSA:3.40.190.10 125 326 5.7E-109 T 12-10-2018 YpsIP31758_1034 10ba1628845ff53e67d7bc89ac372e32 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.197 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 YpsIP31758_1034 10ba1628845ff53e67d7bc89ac372e32 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 6.2E-37 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 YpsIP31758_1034 10ba1628845ff53e67d7bc89ac372e32 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-30 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 SUPERFAMILY SSF53697 19 377 1.11E-55 T 12-10-2018 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 Gene3D G3DSA:3.40.50.10490 4 204 1.3E-54 T 12-10-2018 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 Pfam PF01380 SIS domain 229 358 9.0E-13 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 Pfam PF01380 SIS domain 54 192 8.3E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 Gene3D G3DSA:3.40.50.10490 205 380 1.2E-64 T 12-10-2018 YpsIP31758_0941 92bb86f917f33807bb0f1b905d804049 388 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 386 5.5E-164 T 12-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.30.9.10 134 361 2.2E-51 T 12-10-2018 YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 105 404 2.2E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 6.1E-76 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.832 T 12-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF54373 269 359 1.96E-17 T 12-10-2018 YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 1 85 2.7E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1997 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 1 417 3.24E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 SMART SM00739 4 31 9.8E-4 T 12-10-2018 IPR005824 KOW YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.948 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF00467 KOW motif 8 37 7.7E-5 T 12-10-2018 IPR005824 KOW YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.3E-39 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 SUPERFAMILY SSF50104 4 101 5.54E-33 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 Gene3D G3DSA:2.30.30.30 2 104 1.9E-40 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 YpsIP31758_3903 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 3.7E-23 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0224 e50c5b4d43ef77201370cdf3e8945e28 371 Gene3D G3DSA:3.20.20.190 38 365 1.8E-132 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_0224 e50c5b4d43ef77201370cdf3e8945e28 371 SUPERFAMILY SSF51695 40 364 4.19E-91 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_0224 e50c5b4d43ef77201370cdf3e8945e28 371 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 358 4.4E-70 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF01979 Amidohydrolase family 130 459 8.0E-70 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51556 135 571 5.11E-178 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:3.20.20.140 134 569 6.8E-277 T 12-10-2018 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51338 2 183 4.54E-56 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 2.5E-283 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:2.30.40.10 4 485 6.8E-277 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 9.4E-51 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 5.2E-27 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 5.2E-27 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 5.2E-27 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 5.2E-27 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 12-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1079 0e06d64da01f800eae2b85a8f3155752 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.489 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1760 008863ee7a296a03607b11eae0e4b2ac 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.8E-67 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 YpsIP31758_1760 008863ee7a296a03607b11eae0e4b2ac 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.7E-26 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YpsIP31758_1760 008863ee7a296a03607b11eae0e4b2ac 135 Gene3D G3DSA:3.10.180.10 1 131 4.3E-49 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_1760 008863ee7a296a03607b11eae0e4b2ac 135 SUPERFAMILY SSF54593 1 128 3.22E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_1760 008863ee7a296a03607b11eae0e4b2ac 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 6.8E-27 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 Gene3D G3DSA:1.10.101.10 197 280 9.5E-30 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 SMART SM00644 36 182 2.4E-25 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 Gene3D G3DSA:3.40.80.10 46 196 5.7E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 Pfam PF01471 Putative peptidoglycan binding domain 218 269 2.1E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 SUPERFAMILY SSF47090 202 279 2.75E-22 T 12-10-2018 IPR036365 PGBD-like superfamily YpsIP31758_1684 7542ab4b2585da98311d33234dd5f939 283 SUPERFAMILY SSF55846 29 198 4.06E-52 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 Gene3D G3DSA:3.65.10.10 242 420 3.6E-157 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 SUPERFAMILY SSF55205 4 424 6.32E-145 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 5.5E-153 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 PIRSF PIRSF000505 2 428 1.4E-153 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.441 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 9.5E-142 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 Gene3D G3DSA:3.65.10.10 21 224 3.6E-157 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YpsIP31758_2582 f04fc7621f2e8ae3262c5660d1237198 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 SUPERFAMILY SSF52540 14 228 3.8E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 Pfam PF00005 ABC transporter 17 163 9.6E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 SMART SM00382 23 219 4.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 Gene3D G3DSA:3.40.50.300 2 251 2.7E-54 T 12-10-2018 YpsIP31758_1722 c5fd870f9f9bda58514cf9cdfd294e7a 252 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 250 45.254 T 12-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 YpsIP31758_2237 1c4e9b502765d5d612b60c707df79259 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 19 66 7.8E-6 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YpsIP31758_2237 1c4e9b502765d5d612b60c707df79259 75 SUPERFAMILY SSF143120 1 70 1.02E-9 T 12-10-2018 IPR036165 YefM-like superfamily YpsIP31758_1299 69d9b8c8c536f384ce945f759e6760ce 345 Gene3D G3DSA:3.40.190.10 39 308 4.6E-121 T 12-10-2018 YpsIP31758_1299 69d9b8c8c536f384ce945f759e6760ce 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 27 339 8.3E-159 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YpsIP31758_1299 69d9b8c8c536f384ce945f759e6760ce 345 Pfam PF13531 Bacterial extracellular solute-binding protein 48 293 2.7E-41 T 12-10-2018 YpsIP31758_1299 69d9b8c8c536f384ce945f759e6760ce 345 SUPERFAMILY SSF53850 32 339 1.41E-78 T 12-10-2018 YpsIP31758_1299 69d9b8c8c536f384ce945f759e6760ce 345 Gene3D G3DSA:3.40.190.10 127 338 4.6E-121 T 12-10-2018 YpsIP31758_3175 b79e71f444a58f0454a892e5526c5229 596 Gene3D G3DSA:2.40.160.50 213 593 3.8E-60 T 12-10-2018 YpsIP31758_3175 b79e71f444a58f0454a892e5526c5229 596 Pfam PF08479 POTRA domain, ShlB-type 86 166 3.0E-13 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_3175 b79e71f444a58f0454a892e5526c5229 596 Gene3D G3DSA:3.10.20.310 79 166 5.7E-16 T 12-10-2018 YpsIP31758_3175 b79e71f444a58f0454a892e5526c5229 596 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 241 532 4.2E-17 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 SUPERFAMILY SSF50331 243 363 3.19E-27 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 Gene3D G3DSA:3.40.50.300 4 228 1.7E-59 T 12-10-2018 YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 Pfam PF08402 TOBE domain 288 359 1.6E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 SMART SM00382 28 211 1.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 Pfam PF00005 ABC transporter 20 161 9.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 Gene3D G3DSA:2.40.50.140 295 351 5.2E-35 T 12-10-2018 YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 SUPERFAMILY SSF52540 4 249 1.08E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2169 8ca61e2d394867ba4fad7bdc6b0fa028 380 Gene3D G3DSA:2.40.50.940 229 360 5.2E-35 T 12-10-2018 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 Pfam PF12221 Bacterial membrane protein N terminal 1 60 4.8E-14 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 Gene3D G3DSA:3.30.479.30 123 256 2.8E-18 T 12-10-2018 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 Pfam PF01145 SPFH domain / Band 7 family 98 269 4.6E-30 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 183 200 1.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 101 123 1.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 PRINTS PR00721 Stomatin signature 148 169 1.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 SMART SM00244 94 254 7.6E-43 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 TIGRFAM TIGR01933 hflK: HflK protein 96 355 9.8E-121 T 12-10-2018 IPR010201 HflK GO:0016021 YpsIP31758_3651 52b9f73b19e433e63cf9b7c672b1ac6d 420 SUPERFAMILY SSF117892 127 258 4.18E-20 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 Gene3D G3DSA:1.10.1200.120 3 135 3.4E-42 T 12-10-2018 IPR036019 Gated mechanosensitive channel YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 SUPERFAMILY SSF81330 12 128 4.18E-35 T 12-10-2018 IPR036019 Gated mechanosensitive channel YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 133 24.165 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 132 3.6E-45 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L YpsIP31758_3886 bdf1bed5be211391ec3375e2a43e7e62 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 1.9E-54 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 Pfam PF00005 ABC transporter 20 170 1.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 SMART SM00382 29 217 1.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 SMART SM00382 279 480 9.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 Pfam PF00005 ABC transporter 274 423 1.3E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 SUPERFAMILY SSF52540 272 485 3.32E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 Gene3D G3DSA:3.40.50.300 248 491 2.6E-41 T 12-10-2018 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 Gene3D G3DSA:3.40.50.300 1 245 1.1E-55 T 12-10-2018 YpsIP31758_1508 cae86937179b5e68a3811971aeda9af7 496 SUPERFAMILY SSF52540 3 227 9.76E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 420 512 1.03E-25 T 12-10-2018 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF53686 14 365 6.81E-101 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.50.1100 61 157 4.3E-130 T 12-10-2018 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 336 423 9.16E-28 T 12-10-2018 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 3.0E-28 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 6.9E-26 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.1020.10 338 514 7.4E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 1.7E-76 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.50.1100 25 327 4.3E-130 T 12-10-2018 YpsIP31758_0158 c4b98d901d0e264b88f4115c30857cc8 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.1E-261 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.145 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 SUPERFAMILY SSF53383 6 416 4.68E-180 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 PIRSF PIRSF000412 1 417 1.4E-168 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.8E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 Gene3D G3DSA:3.40.640.10 37 289 1.7E-182 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 Gene3D G3DSA:3.90.1150.10 10 395 1.7E-182 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1158 fbc2898ec4e9a3b727cd0b0692d748f8 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:1.10.260.40 1 61 3.1E-28 T 12-10-2018 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.9E-149 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 5.4E-14 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 SMART SM00354 1 73 2.9E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:3.40.50.2300 62 154 6.8E-25 T 12-10-2018 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 SUPERFAMILY SSF47413 2 58 2.38E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 Gene3D G3DSA:3.40.50.2300 155 333 3.7E-28 T 12-10-2018 YpsIP31758_3399 79bd111a8f343d6b4852f24471a5a26d 336 SUPERFAMILY SSF53822 60 314 3.73E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Gene3D G3DSA:3.50.50.60 267 671 2.2E-153 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 674 2.6E-157 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Gene3D G3DSA:3.40.50.150 9 251 1.0E-108 T 12-10-2018 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 SUPERFAMILY SSF53335 138 242 4.32E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Gene3D G3DSA:3.30.9.10 351 574 2.2E-153 T 12-10-2018 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 1.5E-49 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Pfam PF01266 FAD dependent oxidoreductase 266 644 3.4E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 669 28.263 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 YpsIP31758_1410 f57b5c8a3feeb0a5429550153637bcbe 689 SUPERFAMILY SSF51905 266 673 5.24E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Gene3D G3DSA:2.60.200.60 72 159 1.4E-13 T 12-10-2018 YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Pfam PF03527 RHS protein 1180 1216 3.6E-17 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Gene3D G3DSA:3.90.930.1 569 727 6.4E-13 T 12-10-2018 YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Gene3D G3DSA:2.180.10.10 857 1290 1.1E-42 T 12-10-2018 YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Pfam PF05593 RHS Repeat 865 901 4.5E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Pfam PF05593 RHS Repeat 640 671 1.1E-6 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Pfam PF05593 RHS Repeat 659 695 1.2E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1207 1290 1.2E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 Pfam PF05488 PAAR motif 83 149 1.5E-12 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 722 761 2.4E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 642 678 3.8E-5 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 680 720 9.0E-5 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 865 904 3.0E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0333 e233444f0e8de9dc64c0b55169a3bb17 1418 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 414 440 0.0016 T 12-10-2018 IPR006530 YD repeat YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 2.7E-23 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 4.2E-231 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 1.0E-94 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 4.7E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 4.7E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 4.7E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.7E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 3.1E-55 T 12-10-2018 YpsIP31758_1464 43af4633f6013a2ddc338ece266d26ab 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 3.1E-55 T 12-10-2018 YpsIP31758_2259 06688488867f069cb0edb6387a43d595 471 Pfam PF00324 Amino acid permease 27 464 7.2E-114 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_2259 06688488867f069cb0edb6387a43d595 471 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_2259 06688488867f069cb0edb6387a43d595 471 Gene3D G3DSA:1.20.1740.10 17 470 2.2E-59 T 12-10-2018 YpsIP31758_2259 06688488867f069cb0edb6387a43d595 471 PIRSF PIRSF006060 2 469 6.4E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 528 3.9E-154 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 Gene3D G3DSA:2.30.110.50 5 336 2.4E-89 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 Gene3D G3DSA:2.40.50.230 362 463 5.1E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 Pfam PF05954 Phage late control gene D protein (GPD) 18 335 9.8E-87 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 SUPERFAMILY SSF69279 6 192 5.53E-50 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 SUPERFAMILY SSF69349 449 656 1.02E-43 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 SUPERFAMILY SSF69279 200 371 2.04E-34 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 Gene3D G3DSA:3.30.1920.30 232 294 2.4E-89 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 14 511 1.2E-118 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 SUPERFAMILY SSF69255 371 459 5.23E-32 T 12-10-2018 YpsIP31758_1374 799298776a8f33e2bf76c65198743b4a 916 Gene3D G3DSA:3.55.50.10 106 196 2.4E-89 T 12-10-2018 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 SUPERFAMILY SSF109604 30 503 4.71E-64 T 12-10-2018 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 506 53.236 T 12-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Pfam PF13286 Phosphohydrolase-associated domain 461 501 7.7E-6 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3410.10 261 391 2.5E-22 T 12-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 504 5.5E-126 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3210.10 1 146 3.6E-44 T 12-10-2018 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Gene3D G3DSA:1.10.3210.10 150 258 4.0E-16 T 12-10-2018 YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 SMART SM00471 62 283 2.4E-11 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_3324 339cff3ebd287f2b07fdd6d6e59bb94d 506 Pfam PF01966 HD domain 66 133 3.1E-10 T 12-10-2018 IPR006674 HD domain YpsIP31758_3791 52b6077f1f783c4da845fee0afdcd006 378 Gene3D G3DSA:3.40.50.2020 26 218 5.4E-10 T 12-10-2018 YpsIP31758_3791 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF15609 Phosphoribosyl transferase 32 218 7.8E-62 T 12-10-2018 YpsIP31758_3791 52b6077f1f783c4da845fee0afdcd006 378 PIRSF PIRSF020967 1 378 1.4E-221 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 YpsIP31758_3791 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF12500 TRSP domain C terminus to PRTase_2 265 356 1.2E-20 T 12-10-2018 IPR022537 TRSP domain YpsIP31758_3791 52b6077f1f783c4da845fee0afdcd006 378 SUPERFAMILY SSF53271 27 220 3.15E-19 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 Gene3D G3DSA:1.20.1730.10 26 481 2.8E-83 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 4.0E-107 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 7.6E-242 T 12-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 Pfam PF00474 Sodium:solute symporter family 36 432 6.9E-131 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0389 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF101967 365 503 1.29E-23 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 643 680 1.2E-7 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 481 521 3.1E-9 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 322 362 4.4E-8 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 754 791 2.5E-9 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 160 191 3.6E-5 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF101967 685 775 4.45E-20 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:3.30.1300.30 807 880 1.7E-28 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF54523 765 880 3.3E-25 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF101967 199 344 6.8E-23 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 392 418 2.2E-6 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 724 748 3.5E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 579 605 4.6E-5 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF05658 Head domain of trimeric autotransporter adhesin 551 576 2.9E-5 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF101967 527 664 2.35E-18 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:2.150.10.10 688 806 5.7E-22 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:2.150.10.10 379 535 3.1E-45 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:2.150.10.10 538 687 1.3E-31 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:2.150.10.10 242 376 9.7E-31 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Pfam PF03895 YadA-like membrane anchor domain 821 880 5.4E-17 T 12-10-2018 IPR005594 YadA-like, C-terminal YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 SUPERFAMILY SSF101967 111 185 1.44E-5 T 12-10-2018 YpsIP31758_1650 792416d8b02e19cac043e0815af55449 880 Gene3D G3DSA:2.150.10.10 51 185 1.1E-5 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 Gene3D G3DSA:3.40.630.10 25 369 1.2E-80 T 12-10-2018 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 SUPERFAMILY SSF55031 186 300 3.44E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 Gene3D G3DSA:3.30.70.360 186 301 1.2E-80 T 12-10-2018 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 Pfam PF01546 Peptidase family M20/M25/M40 81 382 2.7E-33 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 152 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 382 5.8E-155 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 387 65.426 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 80 89 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 Pfam PF07687 Peptidase dimerisation domain 183 292 1.3E-25 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain YpsIP31758_0126 05429d906976d98c06fd12a1189eeec8 389 SUPERFAMILY SSF53187 4 387 2.63E-57 T 12-10-2018 YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 3.4E-87 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 SMART SM00062 22 242 2.5E-84 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 Gene3D G3DSA:3.40.190.10 26 240 6.5E-84 T 12-10-2018 YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 SMART SM00079 22 243 5.1E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 Gene3D G3DSA:3.40.190.10 108 201 6.5E-84 T 12-10-2018 YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 4.0E-71 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2639 30698a814d4ac80cb22c729df804caff 243 SUPERFAMILY SSF53850 1 242 1.13E-73 T 12-10-2018 YpsIP31758_2131 7f172d0be8f04e4ce95b7a55dde1bd47 822 Gene3D G3DSA:1.25.40.10 19 302 8.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2131 7f172d0be8f04e4ce95b7a55dde1bd47 822 SUPERFAMILY SSF48452 107 293 1.83E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2131 7f172d0be8f04e4ce95b7a55dde1bd47 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 822 0.0 T 12-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.40.50.620 194 514 3.1E-114 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.2E-123 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 7.7E-41 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF00733 Asparagine synthase 212 366 2.3E-58 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.60.20.10 2 193 9.7E-75 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF56235 1 196 1.89E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 PIRSF PIRSF001589 1 367 2.4E-108 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 PIRSF PIRSF001589 362 505 2.3E-28 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 YpsIP31758_2913 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF52402 212 483 1.13E-74 T 12-10-2018 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 9.2E-42 T 12-10-2018 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.6E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:1.10.260.40 1 67 1.1E-23 T 12-10-2018 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF47413 8 67 9.09E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 69 314 5.7E-84 T 12-10-2018 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF53822 68 340 9.42E-92 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 12-10-2018 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 SMART SM00354 9 79 3.7E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0115 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 168 297 5.7E-84 T 12-10-2018 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.47 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:3.40.190.10 129 224 1.2E-64 T 12-10-2018 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:1.10.530.10 285 468 1.3E-33 T 12-10-2018 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Pfam PF01464 Transglycosylase SLT domain 298 402 2.7E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 SMART SM00062 44 268 1.6E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 5.9E-35 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:3.40.190.10 38 263 1.2E-64 T 12-10-2018 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 SUPERFAMILY SSF53850 45 267 4.35E-40 T 12-10-2018 YpsIP31758_1146 58d6fba5dd2af73f33e584d4b4bb2591 486 SUPERFAMILY SSF53955 290 451 2.15E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.862 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 Pfam PF08323 Starch synthase catalytic domain 2 233 1.4E-70 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 Gene3D G3DSA:3.40.50.2000 249 458 2.2E-188 T 12-10-2018 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 Gene3D G3DSA:3.40.50.2000 3 473 2.2E-188 T 12-10-2018 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 4.4E-169 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 SUPERFAMILY SSF53756 1 476 9.77E-116 T 12-10-2018 YpsIP31758_4003 1f64ac29b2cbc212744ca4db008b2379 476 Pfam PF00534 Glycosyl transferases group 1 288 448 8.8E-16 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 Gene3D G3DSA:3.30.300.30 98 193 8.3E-33 T 12-10-2018 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 Pfam PF01514 Secretory protein of YscJ/FliF family 7 191 1.2E-28 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 Gene3D G3DSA:3.30.70.1530 21 91 2.6E-26 T 12-10-2018 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 2.0E-74 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 4.1E-18 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 4.1E-18 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 4.1E-18 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 4.1E-18 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_3822 28390107213d670be2816eab32bb42c4 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 4.1E-18 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 571 5.1E-6 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 2.6E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.3E-25 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF52374 5 668 8.56E-140 T 12-10-2018 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 5.7E-16 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 12-10-2018 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.10.20.590 799 860 2.9E-25 T 12-10-2018 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 12-10-2018 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.378 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF47323 662 859 1.64E-37 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 4.5E-78 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF50677 226 415 5.55E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.2E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YpsIP31758_2926 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_1849 ad80b3380f940ebefec0e8363220f9cf 343 Gene3D G3DSA:3.40.190.10 150 337 5.3E-25 T 12-10-2018 YpsIP31758_1849 ad80b3380f940ebefec0e8363220f9cf 343 Gene3D G3DSA:3.40.190.10 40 149 3.6E-13 T 12-10-2018 YpsIP31758_1849 ad80b3380f940ebefec0e8363220f9cf 343 SUPERFAMILY SSF53850 44 278 2.29E-40 T 12-10-2018 YpsIP31758_1849 ad80b3380f940ebefec0e8363220f9cf 343 Pfam PF13379 NMT1-like family 56 268 4.4E-20 T 12-10-2018 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.4E-45 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.3E-51 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.859 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 PIRSF PIRSF000102 1 310 3.4E-60 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF56327 146 311 8.65E-43 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.40.50.720 1 146 6.6E-64 T 12-10-2018 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF51735 1 145 5.31E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 9.8E-137 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 YpsIP31758_3616 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.90.110.10 147 312 1.2E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.10.160 114 187 5.0E-105 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.486.10 382 538 1.9E-137 T 12-10-2018 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 SUPERFAMILY SSF52540 4 642 3.38E-181 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.4E-73 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 10 274 5.0E-105 T 12-10-2018 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 281 636 1.9E-137 T 12-10-2018 YpsIP31758_0209 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 2.1E-75 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YpsIP31758_2009 237dadbe122640e0e1b2bca9c57ad6ee 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 1.0E-42 T 12-10-2018 IPR027354 YcgL domain YpsIP31758_2009 237dadbe122640e0e1b2bca9c57ad6ee 90 SUPERFAMILY SSF160191 1 87 1.57E-38 T 12-10-2018 IPR038068 YcgL-like superfamily YpsIP31758_2009 237dadbe122640e0e1b2bca9c57ad6ee 90 Pfam PF05166 YcgL domain 3 75 1.7E-33 T 12-10-2018 IPR027354 YcgL domain YpsIP31758_2009 237dadbe122640e0e1b2bca9c57ad6ee 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.625 T 12-10-2018 IPR027354 YcgL domain YpsIP31758_2009 237dadbe122640e0e1b2bca9c57ad6ee 90 Gene3D G3DSA:3.10.510.20 1 74 1.4E-31 T 12-10-2018 IPR038068 YcgL-like superfamily YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 20 75 1.9E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.8E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3637 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 Gene3D G3DSA:2.60.40.10 149 245 4.9E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 SUPERFAMILY SSF49584 152 243 4.97E-16 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 234 4.5E-16 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 Gene3D G3DSA:2.60.40.10 24 145 1.1E-43 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 PRINTS PR00969 Pili chaperone signature 72 93 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 PRINTS PR00969 Pili chaperone signature 100 117 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 PRINTS PR00969 Pili chaperone signature 126 141 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 PRINTS PR00969 Pili chaperone signature 23 32 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 PRINTS PR00969 Pili chaperone signature 166 181 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 SUPERFAMILY SSF49354 18 144 7.85E-42 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_1364 3457020d95a1d3857a337613e2bfaba7 253 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 144 6.9E-44 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 8 733 54.558 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 SUPERFAMILY SSF51735 315 496 1.81E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 210 1.6E-40 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 SUPERFAMILY SSF48179 642 733 2.47E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 SUPERFAMILY SSF52096 11 306 3.47E-64 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 643 729 3.0E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 592 5.7E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 SUPERFAMILY SSF48179 499 598 1.7E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 13 733 0.0 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Gene3D G3DSA:3.40.50.720 316 501 2.7E-60 T 12-10-2018 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Gene3D G3DSA:1.10.1040.50 502 728 1.1E-64 T 12-10-2018 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 496 521 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 1.4E-56 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_1400 16a1db57cd4b68924c19c07f88b17259 747 Gene3D G3DSA:3.90.226.10 10 312 7.9E-95 T 12-10-2018 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 1.7E-156 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 2.2E-225 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 Pfam PF00202 Aminotransferase class-III 24 401 1.3E-123 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 SUPERFAMILY SSF53383 16 402 1.88E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 PIRSF PIRSF000521 179 408 6.3E-38 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 PIRSF PIRSF000521 22 163 1.8E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 Gene3D G3DSA:3.90.1150.10 24 398 4.0E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 Gene3D G3DSA:3.40.640.10 59 310 4.0E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 Hamap MF_01173 Succinylornithine transaminase [astC]. 3 414 76.462 T 12-10-2018 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 YpsIP31758_2121 4dfa58abaf46488107980ba52d30858f 414 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 408 70.603 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 SUPERFAMILY SSF52540 334 576 8.13E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 Pfam PF00005 ABC transporter 357 505 2.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 Gene3D G3DSA:1.20.1560.10 1 328 8.8E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 SMART SM00382 366 557 6.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 Gene3D G3DSA:3.40.50.300 332 588 1.4E-80 T 12-10-2018 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 SUPERFAMILY SSF90123 12 324 7.06E-69 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_3079 59d88053603b08ab9c111facc2a4670f 607 Pfam PF00664 ABC transporter transmembrane region 26 295 4.2E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Gene3D G3DSA:3.40.50.12160 3 136 1.2E-32 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 2.4E-207 T 12-10-2018 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.904 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Gene3D G3DSA:3.80.30.20 145 379 8.9E-85 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 5.7E-157 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF01938 TRAM domain 378 440 3.8E-18 T 12-10-2018 IPR002792 TRAM domain YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.3E-28 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 SMART SM00729 147 367 3.5E-64 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 Pfam PF04055 Radical SAM superfamily 151 325 1.0E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 SUPERFAMILY SSF102114 127 372 4.19E-64 T 12-10-2018 YpsIP31758_2915 c68d68e7cb15f29a0886573bddd6c526 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 Gene3D G3DSA:2.40.160.20 25 174 7.6E-48 T 12-10-2018 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 7.3E-23 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 86 109 1.0E-35 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 162 173 1.0E-35 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 1.0E-35 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 135 156 1.0E-35 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 SUPERFAMILY SSF56925 28 174 2.88E-30 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_1501 7f3ec854cdb6e7a7b992eac27c39ae50 174 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 6.0E-106 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 Gene3D G3DSA:3.40.600.10 6 228 3.7E-50 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 SMART SM00927 59 157 3.6E-66 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 152.64 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 SUPERFAMILY SSF52980 9 227 2.09E-80 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_0980 86772d879e2489a080c8090410a5f053 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.8E-33 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 SUPERFAMILY SSF53383 2 374 2.86E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.952 T 12-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 1.1E-83 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.40.640.10 1 249 9.1E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 PIRSF PIRSF000390 1 376 2.6E-116 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.6E-211 T 12-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 YpsIP31758_0189 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.90.1150.10 250 376 1.1E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 SUPERFAMILY SSF51569 35 274 2.49E-63 T 12-10-2018 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 SMART SM01133 51 259 1.5E-30 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 PIRSF PIRSF038992 31 288 2.0E-79 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.464 T 12-10-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 Gene3D G3DSA:3.20.20.70 1 291 1.9E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3525 288c0c38bc909cce89b3bb3516fd160e 291 Pfam PF01791 DeoC/LacD family aldolase 51 258 6.2E-19 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3279 03c9ab552a2e6e8f03de3af6c00a8857 256 Gene3D G3DSA:3.40.190.10 121 212 8.3E-67 T 12-10-2018 YpsIP31758_3279 03c9ab552a2e6e8f03de3af6c00a8857 256 Gene3D G3DSA:3.40.190.10 27 243 8.3E-67 T 12-10-2018 YpsIP31758_3279 03c9ab552a2e6e8f03de3af6c00a8857 256 SMART SM00062 34 256 5.5E-31 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_3279 03c9ab552a2e6e8f03de3af6c00a8857 256 SUPERFAMILY SSF53850 3 245 7.15E-45 T 12-10-2018 YpsIP31758_3279 03c9ab552a2e6e8f03de3af6c00a8857 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 241 5.1E-40 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:1.10.730.10 389 526 1.0E-32 T 12-10-2018 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF50249 568 674 2.33E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:3.40.50.620 8 384 3.4E-161 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:2.20.28.20 142 176 3.4E-161 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 4.3E-163 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF47323 390 546 1.2E-43 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.173 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:2.40.50.140 563 675 2.7E-29 T 12-10-2018 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 6.0E-198 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF52374 6 387 3.58E-101 T 12-10-2018 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF57770 142 176 1.12E-12 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 6.7E-45 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 2.1E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2455 381a78c5b41808a611ce611e4d203ca2 675 Pfam PF01588 Putative tRNA binding domain 579 672 2.1E-21 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF52833 1 79 4.12E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.5E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 8.9E-15 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:1.20.1050.10 82 188 5.9E-79 T 12-10-2018 YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:3.40.30.10 3 193 5.9E-79 T 12-10-2018 YpsIP31758_1775 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF47616 84 199 3.06E-27 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 795 4.8E-282 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 348 421 9.7E-14 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 92 172 3.2E-11 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 267 344 6.1E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 176 263 2.4E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 PIRSF PIRSF006076 1 795 1.2E-251 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:3.10.20.310 347 425 3.1E-25 T 12-10-2018 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:3.10.20.310 92 174 5.7E-16 T 12-10-2018 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 795 25.905 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:3.10.20.310 265 346 3.0E-16 T 12-10-2018 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF01103 Surface antigen 448 795 5.5E-100 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:3.10.20.310 19 91 2.3E-20 T 12-10-2018 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:2.40.160.50 426 795 1.3E-141 T 12-10-2018 YpsIP31758_1021 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:3.10.20.310 175 264 1.7E-23 T 12-10-2018 YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 SUPERFAMILY SSF50346 106 182 2.35E-19 T 12-10-2018 IPR011033 PRC-barrel-like superfamily YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 SUPERFAMILY SSF50447 13 99 3.46E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 Pfam PF05239 PRC-barrel domain 103 177 3.9E-9 T 12-10-2018 IPR027275 PRC-barrel domain YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.537 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 Gene3D G3DSA:2.30.30.240 101 182 1.5E-31 T 12-10-2018 YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 2.6E-60 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 Gene3D G3DSA:2.40.30.60 5 100 1.2E-34 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 YpsIP31758_3227 953c5d99f89d3131dc40c06bd0d438f6 182 Pfam PF01782 RimM N-terminal domain 16 96 1.1E-26 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF56176 203 289 1.12E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF54631 66 202 3.79E-32 T 12-10-2018 YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF03471 Transporter associated domain 206 281 8.1E-22 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.10.580.10 51 197 3.4E-56 T 12-10-2018 YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 143 189 1.2E-4 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 69 123 5.3E-8 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 78 127 3.9 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 141 189 3.9 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.30.465.10 198 292 2.2E-34 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_2918 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM01091 205 283 1.8E-29 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF55781 438 588 1.44E-6 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 SMART SM00471 604 914 1.3E-4 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF109604 600 682 2.8E-8 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 SUPERFAMILY SSF109604 834 938 1.19E-6 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:1.20.1480.50 334 423 2.7E-8 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Pfam PF13487 HD domain 831 896 1.3E-20 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.20 174 229 9.9E-11 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:1.10.3210.10 822 952 5.0E-24 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:1.10.3210.10 588 757 2.6E-19 T 12-10-2018 YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.40 424 587 7.1E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_2287 003ad78cb36bb37e2bb103823937bc75 984 Gene3D G3DSA:3.30.450.20 230 275 9.9E-11 T 12-10-2018 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50447 205 301 1.75E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.7E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.0E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 206 334 5.6E-52 T 12-10-2018 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 338 393 8.9E-29 T 12-10-2018 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50465 298 393 1.78E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.224 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF52540 6 219 8.65E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-71 T 12-10-2018 YpsIP31758_3867 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.2E-237 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_2313 e55651cdf8800a3b40f4aa23bfb59ece 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 5.8E-24 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_2313 e55651cdf8800a3b40f4aa23bfb59ece 326 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 198 1.1E-72 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YpsIP31758_2313 e55651cdf8800a3b40f4aa23bfb59ece 326 SUPERFAMILY SSF64518 2 324 2.48E-59 T 12-10-2018 YpsIP31758_2313 e55651cdf8800a3b40f4aa23bfb59ece 326 Gene3D G3DSA:1.20.1330.10 40 272 4.2E-67 T 12-10-2018 YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 Gene3D G3DSA:3.30.70.270 245 414 1.9E-54 T 12-10-2018 YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 SUPERFAMILY SSF55073 256 410 4.94E-47 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 Pfam PF17152 Periplasmic sensor domain 47 148 1.4E-30 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 SMART SM00267 240 414 6.2E-65 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 406 9.0E-49 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3487 6dc82d3f0bc49bd7bd88e3e216462f04 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 408 1.7E-45 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 SMART SM00354 1 71 2.2E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.6E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 61 303 6.3E-64 T 12-10-2018 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF47413 1 59 2.32E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF13377 Periplasmic binding protein-like domain 169 321 2.0E-31 T 12-10-2018 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 160 287 6.3E-64 T 12-10-2018 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:1.10.260.40 1 58 1.6E-21 T 12-10-2018 YpsIP31758_3952 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF53822 61 324 2.14E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 Gene3D G3DSA:3.90.1150.10 29 392 2.9E-157 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 72.659 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 Pfam PF00202 Aminotransferase class-III 24 398 7.9E-138 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 4.1E-154 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 9.0E-209 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 PIRSF PIRSF000521 173 402 6.1E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 PIRSF PIRSF000521 28 156 5.0E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 Gene3D G3DSA:3.40.640.10 59 304 2.9E-157 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3947 df7bb81c8881ad1a7a899df617cee575 405 SUPERFAMILY SSF53383 17 399 1.29E-127 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 54 64 1.3E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 93 105 1.3E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 76 1.3E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 Gene3D G3DSA:2.10.109.10 27 139 9.0E-45 T 12-10-2018 YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 SUPERFAMILY SSF51306 18 137 7.5E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_B0052 330558ec36bab2689ac565c10f0840f7 139 Pfam PF00717 Peptidase S24-like 57 122 3.3E-13 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YpsIP31758_2921 507e4f76eb580bf802ea0467cf5ab59e 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 131 4.6E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_2921 507e4f76eb580bf802ea0467cf5ab59e 246 SUPERFAMILY SSF161098 24 223 7.85E-37 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2921 507e4f76eb580bf802ea0467cf5ab59e 246 Gene3D G3DSA:1.10.3720.10 18 238 2.3E-43 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2921 507e4f76eb580bf802ea0467cf5ab59e 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 5.7E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3074 96f61e56bbd60dc724bdcce9f80c24bd 187 SUPERFAMILY SSF46767 88 170 5.23E-25 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 YpsIP31758_3074 96f61e56bbd60dc724bdcce9f80c24bd 187 Gene3D G3DSA:1.10.10.10 87 187 1.5E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3074 96f61e56bbd60dc724bdcce9f80c24bd 187 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 89 152 4.1E-15 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_3074 96f61e56bbd60dc724bdcce9f80c24bd 187 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 169 6.1E-25 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF00037 4Fe-4S binding domain 165 185 7.2E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 60 127 5.2E-10 T 12-10-2018 YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF12838 4Fe-4S dicluster domain 67 118 1.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 128 189 1.1E-7 T 12-10-2018 YpsIP31758_1340 b4db0443115485606f2fb1e1ddfba28f 189 SUPERFAMILY SSF54862 59 187 1.79E-18 T 12-10-2018 YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 Pfam PF03887 YfbU domain 1 164 1.3E-69 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 SUPERFAMILY SSF116960 1 164 1.23E-69 T 12-10-2018 YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.3190.10 54 164 9.5E-40 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.102 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.287.680 1 53 5.4E-33 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily YpsIP31758_1445 5d95865658b256d7c245198a2f5a412e 164 PIRSF PIRSF006272 1 164 7.2E-75 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU YpsIP31758_A0020 b650c8f91c520e431acb6c3378802781 986 Pfam PF13362 Toprim domain 836 938 1.5E-7 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_A0020 b650c8f91c520e431acb6c3378802781 986 Pfam PF08401 Domain of unknown function (DUF1738) 10 114 1.2E-31 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 YpsIP31758_A0020 b650c8f91c520e431acb6c3378802781 986 SMART SM00493 834 916 9.0E-5 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 2.0E-29 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF01751 Toprim domain 419 531 5.2E-18 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.565.10 1 220 3.4E-97 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 3.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 398 571 2.8E-74 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.10.20.690 592 683 2.3E-36 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.230.10 221 392 3.8E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 706 802 6.4E-26 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF56719 394 795 1.12E-86 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.687 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00433 35 797 3.8E-281 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF55874 4 220 1.44E-77 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.9E-70 T 12-10-2018 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00204 DNA gyrase B 221 390 2.1E-59 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_4150 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00387 31 175 6.0E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 SUPERFAMILY SSF51998 177 700 2.75E-185 T 12-10-2018 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 17 716 0.0 T 12-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF02867 Ribonucleotide reductase, barrel domain 178 695 6.2E-141 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 253 272 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 451 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 579 606 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 384 395 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 495 518 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 467 489 1.8E-32 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 568 590 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 Gene3D G3DSA:1.10.1650.20 296 347 1.8E-28 T 12-10-2018 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 SUPERFAMILY SSF48168 17 176 2.49E-61 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 105 698 1.9E-159 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF08343 Ribonucleotide reductase N-terminal 18 99 7.8E-34 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1063 fb29ab40bdfd466b382b5ce0c0843eb3 716 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 101 173 1.1E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_0193 38fb0b8983af7dd4a30fcde19438a816 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.617 T 12-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 YpsIP31758_0193 38fb0b8983af7dd4a30fcde19438a816 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 1.5E-74 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 YpsIP31758_0193 38fb0b8983af7dd4a30fcde19438a816 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 5.9E-53 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 Gene3D G3DSA:1.10.287.950 236 540 8.8E-79 T 12-10-2018 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 504 4.2E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 SUPERFAMILY SSF47170 47 198 4.97E-40 T 12-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 SMART SM00319 66 202 0.0018 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 82 97 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 211 231 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 27 52 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 495 5.1E-50 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 Gene3D G3DSA:1.20.120.30 44 211 1.1E-39 T 12-10-2018 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 SMART SM00283 291 538 3.0E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 SMART SM00304 236 290 8.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 Pfam PF02203 Tar ligand binding domain homologue 25 193 5.2E-37 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_0967 847a27a0b009cc8883a4250df746f059 563 SUPERFAMILY SSF58104 257 543 2.49E-60 T 12-10-2018 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 Gene3D G3DSA:2.60.40.10 31 153 1.6E-36 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 SUPERFAMILY SSF49584 147 239 7.06E-19 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 Gene3D G3DSA:2.60.40.10 160 244 1.7E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 107 124 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 SUPERFAMILY SSF49354 24 153 3.4E-37 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 PRINTS PR00969 Pili chaperone signature 108 125 7.4E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 PRINTS PR00969 Pili chaperone signature 30 39 7.4E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 PRINTS PR00969 Pili chaperone signature 79 100 7.4E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 PRINTS PR00969 Pili chaperone signature 174 189 7.4E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 PRINTS PR00969 Pili chaperone signature 135 150 7.4E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 153 6.6E-40 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_0167 9a3976a3facfe0177bfe8ab7ee0703ca 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 179 237 1.2E-14 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 223 285 2.0E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 305 372 1.5E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 227 278 5.8E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 3.9E-47 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.5E-39 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 291 374 5.23E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 299 373 6.4E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 8.0E-39 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 386 554 8.3E-42 T 12-10-2018 IPR006512 YidE/YbjL duplication YpsIP31758_2649 87af8d1c8680733b7646e0e25d051946 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.381 T 12-10-2018 IPR023017 Transport protein YbjL, putative YpsIP31758_0405 7d7d5f61f71fa036d3efe4b203f9a402 481 Gene3D G3DSA:3.30.2290.10 11 240 1.3E-18 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal YpsIP31758_0405 7d7d5f61f71fa036d3efe4b203f9a402 481 SUPERFAMILY SSF111283 23 480 6.67E-131 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 YpsIP31758_0405 7d7d5f61f71fa036d3efe4b203f9a402 481 PIRSF PIRSF004919 14 481 1.6E-146 T 12-10-2018 IPR025502 TldD YpsIP31758_0405 7d7d5f61f71fa036d3efe4b203f9a402 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 7.0E-68 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 YpsIP31758_1795 aa2056c8688d31370fc0f2575a559f06 167 Gene3D G3DSA:3.40.30.10 1 167 2.1E-49 T 12-10-2018 YpsIP31758_1795 aa2056c8688d31370fc0f2575a559f06 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 YpsIP31758_1795 aa2056c8688d31370fc0f2575a559f06 167 SUPERFAMILY SSF52833 4 164 1.86E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1795 aa2056c8688d31370fc0f2575a559f06 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 40.468 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 YpsIP31758_1795 aa2056c8688d31370fc0f2575a559f06 167 Pfam PF08534 Redoxin 21 163 2.9E-29 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Pfam PF01627 Hpt domain 838 919 7.7E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 518 2.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF55874 345 517 3.14E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SMART SM00304 199 251 5.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF47384 277 357 3.14E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SMART SM00387 403 519 1.7E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Gene3D G3DSA:1.20.120.160 817 928 5.0E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Gene3D G3DSA:3.40.50.2300 651 791 1.8E-33 T 12-10-2018 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF47226 764 919 7.07E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Gene3D G3DSA:1.20.1480.50 165 254 1.3E-8 T 12-10-2018 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SMART SM00388 291 356 2.3E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SMART SM00073 828 924 7.9E-4 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 1.5E-56 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Pfam PF00072 Response regulator receiver domain 670 781 7.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Gene3D G3DSA:1.10.287.130 255 354 2.4E-28 T 12-10-2018 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF158472 199 248 2.09E-5 T 12-10-2018 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SMART SM00448 668 781 4.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF52172 534 647 3.37E-5 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 8.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 8.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 8.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 8.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 1.3E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 SUPERFAMILY SSF52172 668 786 1.34E-31 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3322 82949657b588d905c62910dc2c2116b3 930 Gene3D G3DSA:3.30.565.10 357 523 7.5E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:3.40.50.10930 4 315 1.5E-128 T 12-10-2018 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 1.1E-301 T 12-10-2018 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52980 819 1121 4.83E-98 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52540 370 811 7.75E-105 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.044 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:3.40.50.300 334 809 2.3E-203 T 12-10-2018 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:1.10.10.990 865 936 5.2E-27 T 12-10-2018 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 SUPERFAMILY SSF52540 1 347 1.49E-124 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 PIRSF PIRSF000980 1 1123 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:1.10.486.10 456 664 2.3E-203 T 12-10-2018 YpsIP31758_0989 4edcfbcd415b4266eb5bb1c02c0d8ad4 1123 Gene3D G3DSA:1.10.10.160 79 187 1.5E-128 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily YpsIP31758_3798 7925f0d1b645579d342df1622f54e23c 169 Pfam PF06228 Haem utilisation ChuX/HutX 22 156 5.6E-34 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like YpsIP31758_3798 7925f0d1b645579d342df1622f54e23c 169 PIRSF PIRSF030840 1 162 3.3E-87 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like YpsIP31758_3798 7925f0d1b645579d342df1622f54e23c 169 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 6 156 6.7E-65 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like YpsIP31758_3798 7925f0d1b645579d342df1622f54e23c 169 Gene3D G3DSA:3.40.1570.10 4 165 1.3E-58 T 12-10-2018 YpsIP31758_3798 7925f0d1b645579d342df1622f54e23c 169 SUPERFAMILY SSF144064 3 160 5.76E-52 T 12-10-2018 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:3.10.196.10 911 1226 4.6E-149 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:3.20.20.20 344 646 1.1E-127 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Pfam PF02607 B12 binding domain 663 736 1.6E-23 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Pfam PF02574 Homocysteine S-methyltransferase 21 329 7.9E-79 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Pfam PF00809 Pterin binding enzyme 364 602 2.1E-61 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SUPERFAMILY SSF52242 747 897 5.1E-46 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SMART SM01018 660 743 1.1E-42 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1211 4.8E-123 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 PIRSF PIRSF000381 5 1198 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:3.20.20.330 5 342 4.4E-123 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:1.10.1240.10 652 740 1.0E-39 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SUPERFAMILY SSF47644 656 742 6.41E-28 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SUPERFAMILY SSF51717 360 634 1.01E-87 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SUPERFAMILY SSF56507 906 1229 5.1E-133 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 TIGRFAM TIGR02082 metH: methionine synthase 17 1195 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Pfam PF02310 B12 binding domain 751 843 1.4E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 SUPERFAMILY SSF82282 11 403 8.24E-115 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:1.10.288.10 939 1095 4.6E-149 T 12-10-2018 YpsIP31758_0298 afe7a49512f5a49445de4d6c851d5f0f 1230 Gene3D G3DSA:3.40.50.280 747 898 1.3E-56 T 12-10-2018 YpsIP31758_3958 7c5fb2b1b3682711a5616b8c6c433428 268 Pfam PF01226 Formate/nitrite transporter 18 247 1.8E-56 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3958 7c5fb2b1b3682711a5616b8c6c433428 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 8.5E-80 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3958 7c5fb2b1b3682711a5616b8c6c433428 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site YpsIP31758_3958 7c5fb2b1b3682711a5616b8c6c433428 268 Gene3D G3DSA:1.20.1080.10 1 258 1.8E-91 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 YpsIP31758_3958 7c5fb2b1b3682711a5616b8c6c433428 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.7E-66 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.0E-218 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-29 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.8E-29 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.8E-29 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.8E-29 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.8E-29 T 12-10-2018 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 Gene3D G3DSA:3.30.390.30 338 450 5.8E-48 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 3.7E-34 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 9.2E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 SUPERFAMILY SSF55424 336 450 1.43E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 PIRSF PIRSF000350 1 447 4.8E-86 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 Gene3D G3DSA:3.50.50.60 144 261 3.0E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 Gene3D G3DSA:3.50.50.60 5 318 3.0E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4049 4043fe57f979c4663ef8089023ab337a 450 SUPERFAMILY SSF51905 1 365 1.01E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4136 8917dc8e0e061463c4536d914924e073 214 Gene3D G3DSA:1.10.10.10 12 115 7.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_4136 8917dc8e0e061463c4536d914924e073 214 SUPERFAMILY SSF46785 16 194 1.87E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3458 7382f7235285feee50431ed4354c7d2d 152 Gene3D G3DSA:3.10.50.40 10 138 5.1E-39 T 12-10-2018 YpsIP31758_3458 7382f7235285feee50431ed4354c7d2d 152 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 2 71 8.8E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YpsIP31758_3458 7382f7235285feee50431ed4354c7d2d 152 SUPERFAMILY SSF54534 1 139 1.1E-34 T 12-10-2018 YpsIP31758_3458 7382f7235285feee50431ed4354c7d2d 152 Gene3D G3DSA:2.40.10.330 69 125 5.1E-39 T 12-10-2018 YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 Gene3D G3DSA:3.20.20.70 9 392 3.6E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 Pfam PF04055 Radical SAM superfamily 19 188 2.1E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 404 1.0E-14 T 12-10-2018 YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 SUPERFAMILY SSF102114 18 351 1.23E-37 T 12-10-2018 YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 281 370 3.0E-19 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 Pfam PF13186 Iron-sulfur cluster-binding domain 282 342 1.7E-7 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain YpsIP31758_0932 8407d75e58871b11b5cfd7bfd8dcd687 408 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 12 389 1.3E-161 T 12-10-2018 YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.20.25.10 1 42 3.5E-15 T 12-10-2018 YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF57783 3 36 2.55E-12 T 12-10-2018 YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF82057 41 112 9.61E-29 T 12-10-2018 YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.7E-12 T 12-10-2018 IPR013987 PhnA protein, N-terminal YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF03831 PhnA domain 47 112 4.3E-34 T 12-10-2018 IPR013988 PhnA protein, C-terminal YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.30.30.40 43 113 4.4E-35 T 12-10-2018 YpsIP31758_1380 3600f3ec8a2a6fa39255db0247b76ed3 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.9E-49 T 12-10-2018 IPR004624 PhnA protein YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 Gene3D G3DSA:3.40.50.1820 1 316 9.3E-112 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 3.9E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 3.9E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 3.9E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PIRSF PIRSF006431 2 316 5.0E-139 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 SUPERFAMILY SSF53474 7 313 2.1E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 Pfam PF00561 alpha/beta hydrolase fold 41 297 4.0E-31 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.4E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 3.4E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 3.4E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2344 61b16e51e46931d3740c2b1238472e22 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 9.2E-126 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 208 456 5.69E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.150.80 524 610 1.2E-30 T 12-10-2018 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00341 531 610 3.1E-26 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 209 340 4.7E-44 T 12-10-2018 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 2 208 2.2E-86 T 12-10-2018 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.10.10 341 523 2.5E-51 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 14 201 1.27E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF09382 RQC domain 406 517 2.8E-37 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00271 Helicase conserved C-terminal domain 228 330 1.1E-19 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00570 HRDC domain 535 601 1.4E-23 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00270 DEAD/DEAH box helicase 28 185 5.1E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 9.4E-266 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.5E-200 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF47819 532 608 2.18E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00487 22 218 2.7E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF16124 RecQ zinc-binding 343 404 3.9E-16 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00956 411 514 1.2E-51 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 YpsIP31758_0218 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00490 250 331 5.9E-28 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2946 3c13da2fcf5ee375824fb283393c570f 312 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 38 113 4.1E-9 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YpsIP31758_2946 3c13da2fcf5ee375824fb283393c570f 312 Gene3D G3DSA:1.10.150.130 29 131 2.1E-28 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_2946 3c13da2fcf5ee375824fb283393c570f 312 SUPERFAMILY SSF56349 29 309 9.42E-56 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_2946 3c13da2fcf5ee375824fb283393c570f 312 Gene3D G3DSA:1.10.443.10 132 312 3.0E-43 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_2946 3c13da2fcf5ee375824fb283393c570f 312 Pfam PF00589 Phage integrase family 158 302 2.1E-22 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_2358 4a6c7ab0b0b71ec1bca5a178c6204ff1 455 Pfam PF07690 Major Facilitator Superfamily 40 395 5.9E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2358 4a6c7ab0b0b71ec1bca5a178c6204ff1 455 Pfam PF11700 Vacuole effluxer Atg22 like 399 449 6.2E-6 T 12-10-2018 IPR024671 Autophagy-related protein 22-like YpsIP31758_2358 4a6c7ab0b0b71ec1bca5a178c6204ff1 455 Gene3D G3DSA:1.20.1250.20 21 450 2.8E-73 T 12-10-2018 YpsIP31758_2358 4a6c7ab0b0b71ec1bca5a178c6204ff1 455 SUPERFAMILY SSF103473 22 447 4.19E-80 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2358 4a6c7ab0b0b71ec1bca5a178c6204ff1 455 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 436 8.7E-237 T 12-10-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 YpsIP31758_4035 1e22881da2d08e14898ceeebc5c3d62e 148 PIRSF PIRSF006276 1 141 5.8E-54 T 12-10-2018 IPR006015 Universal stress protein A YpsIP31758_4035 1e22881da2d08e14898ceeebc5c3d62e 148 Pfam PF00582 Universal stress protein family 3 138 7.5E-21 T 12-10-2018 IPR006016 UspA YpsIP31758_4035 1e22881da2d08e14898ceeebc5c3d62e 148 Gene3D G3DSA:3.40.50.620 2 142 3.7E-51 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_4035 1e22881da2d08e14898ceeebc5c3d62e 148 SUPERFAMILY SSF52402 3 139 1.17E-31 T 12-10-2018 YpsIP31758_0575 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 7.0E-41 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 Pfam PF01817 Chorismate mutase type II 39 104 6.0E-9 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 SUPERFAMILY SSF48600 38 184 2.58E-36 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 Gene3D G3DSA:1.20.140.170 31 186 9.9E-63 T 12-10-2018 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 SMART SM00830 35 106 1.8E-10 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 29 141 3.6E-45 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_2624 67c9d5ce2732c36a100f58f0d32c7eb0 186 PIRSF PIRSF026640 1 186 1.7E-67 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 Gene3D G3DSA:3.40.605.10 8 472 5.7E-173 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 Pfam PF00171 Aldehyde dehydrogenase family 16 474 2.6E-167 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 SUPERFAMILY SSF53720 3 480 6.02E-164 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 Gene3D G3DSA:3.40.309.10 248 444 5.7E-173 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_2363 ef982883ca11c37343c973ffe3eb99de 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 3.1E-214 T 12-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 YpsIP31758_2621 43a28bc1953b580726cdb0118fea9e37 496 Pfam PF13460 NAD(P)H-binding 10 153 9.9E-12 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_2621 43a28bc1953b580726cdb0118fea9e37 496 SUPERFAMILY SSF51735 1 301 2.43E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2621 43a28bc1953b580726cdb0118fea9e37 496 Pfam PF11066 Protein of unknown function (DUF2867) 340 469 1.0E-12 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 YpsIP31758_2621 43a28bc1953b580726cdb0118fea9e37 496 Gene3D G3DSA:3.40.50.720 5 305 1.9E-32 T 12-10-2018 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 Gene3D G3DSA:3.40.190.10 117 243 6.9E-55 T 12-10-2018 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 Gene3D G3DSA:3.40.190.10 31 272 6.9E-55 T 12-10-2018 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 1.1E-84 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 285 8.8E-48 T 12-10-2018 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 SUPERFAMILY SSF53850 26 300 6.95E-45 T 12-10-2018 YpsIP31758_2798 761d5de90e7010aa1ce130c591eb22d5 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 1.0E-102 T 12-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 YpsIP31758_1967 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1967 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1967 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1967 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3398 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3398 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3398 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3398 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3869 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3869 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3869 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3869 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1768 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1768 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1768 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1768 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2877 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2877 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2877 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2877 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3127 5ac9aa884374b307cbfa78224d894ffd 169 SUPERFAMILY SSF143422 18 146 3.27E-46 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3127 5ac9aa884374b307cbfa78224d894ffd 169 Gene3D G3DSA:3.30.70.1290 16 149 2.9E-40 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3127 5ac9aa884374b307cbfa78224d894ffd 169 SMART SM01321 28 146 3.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3127 5ac9aa884374b307cbfa78224d894ffd 169 Pfam PF01797 Transposase IS200 like 29 146 1.4E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 Gene3D G3DSA:3.30.450.40 99 278 3.2E-66 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 SUPERFAMILY SSF55781 98 274 3.99E-50 T 12-10-2018 YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 SUPERFAMILY SSF46785 27 100 6.83E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 Pfam PF09339 IclR helix-turn-helix domain 29 79 4.2E-18 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 Gene3D G3DSA:1.10.10.10 11 88 5.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 SMART SM00346 27 117 6.5E-34 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YpsIP31758_0297 ce25650ab514050a9886fba0cb58b245 280 Pfam PF01614 Bacterial transcriptional regulator 148 271 1.5E-39 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 SMART SM01091 441 520 4.8E-26 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 SUPERFAMILY SSF54631 292 426 5.43E-25 T 12-10-2018 YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF00571 CBS domain 375 424 2.9E-6 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF00571 CBS domain 304 360 0.0012 T 12-10-2018 IPR000644 CBS domain YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Gene3D G3DSA:3.30.465.10 437 520 8.6E-20 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Gene3D G3DSA:3.10.580.10 285 436 5.4E-40 T 12-10-2018 YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF03741 Integral membrane protein TerC family 15 203 1.0E-49 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 SUPERFAMILY SSF56176 439 521 6.82E-21 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_2450 86df7ff4dac20d39d32d130d13d08661 528 Pfam PF03471 Transporter associated domain 442 519 5.0E-18 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF51735 100 288 6.09E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF52283 1 133 7.18E-30 T 12-10-2018 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.673 T 12-10-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.0E-61 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 9.4E-29 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 10 311 2.4E-108 T 12-10-2018 YpsIP31758_4137 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 98 286 2.4E-108 T 12-10-2018 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 Gene3D G3DSA:2.40.100.10 24 189 1.6E-70 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 PIRSF PIRSF001467 15 187 1.1E-28 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 7.0E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 7.0E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 7.0E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 SUPERFAMILY SSF50891 26 188 1.23E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_3950 f795ada360a598fdfc0e0a8cc1e04bbe 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 2.1E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 9.5E-38 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 SUPERFAMILY SSF48168 10 221 1.44E-72 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF03477 ATP cone domain 6 92 8.4E-16 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.7E-178 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 4.0E-12 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 SUPERFAMILY SSF51998 222 741 5.49E-168 T 12-10-2018 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.6E-116 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 Gene3D G3DSA:3.20.70.20 209 732 1.4E-155 T 12-10-2018 YpsIP31758_2769 71c1a417ed3b7619887c34bf110f9c5c 762 Gene3D G3DSA:1.10.1650.20 341 394 1.4E-155 T 12-10-2018 YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF88697 2 70 1.71E-17 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 6.7E-87 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF75217 75 242 1.62E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:2.40.240.20 1 73 2.1E-21 T 12-10-2018 YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 PIRSF PIRSF015601 2 242 1.2E-53 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:3.40.1280.10 74 243 2.9E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_0837 69487175222925c1e6fd2538458f23a8 243 Pfam PF04452 RNA methyltransferase 19 236 4.0E-73 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 Gene3D G3DSA:1.10.260.40 3 64 1.3E-23 T 12-10-2018 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 SUPERFAMILY SSF53822 62 325 5.74E-51 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 12-10-2018 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 3.1E-32 T 12-10-2018 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 SMART SM00354 5 75 2.1E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 Gene3D G3DSA:3.40.50.2300 164 326 1.8E-64 T 12-10-2018 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 Gene3D G3DSA:3.40.50.2300 80 322 1.8E-64 T 12-10-2018 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 SUPERFAMILY SSF47413 5 63 3.66E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0922 ffb96edf676dae5ee8b8b09efa7ed273 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.4E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 59.521 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.924 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.150.130 4 100 6.0E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Pfam PF00589 Phage integrase family 114 285 7.9E-56 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 3.6E-119 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF56349 107 297 2.44E-58 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 2.8E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF47823 5 101 1.29E-36 T 12-10-2018 YpsIP31758_0879 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.443.10 111 293 2.5E-79 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 SUPERFAMILY SSF51735 9 252 5.78E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 Gene3D G3DSA:3.40.50.720 1 253 9.3E-79 T 12-10-2018 YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1470 89f70eeaf9d2839d0c8f57bed31d7437 254 Pfam PF00106 short chain dehydrogenase 11 203 1.4E-63 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 SUPERFAMILY SSF48403 15 188 9.0E-31 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 SMART SM00248 43 72 600.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 SMART SM00248 143 172 0.6 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 SMART SM00248 110 139 460.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 SMART SM00248 76 105 2400.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 YpsIP31758_1125 b9f03237a92616f78bb02536ac9175da 218 Gene3D G3DSA:1.25.40.20 14 208 7.0E-26 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily YpsIP31758_0260 88138ae0d62f1ab918d5a845a6b31361 249 SUPERFAMILY SSF51695 6 242 1.07E-61 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_0260 88138ae0d62f1ab918d5a845a6b31361 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 2.5E-39 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YpsIP31758_0260 88138ae0d62f1ab918d5a845a6b31361 249 Gene3D G3DSA:3.20.20.190 10 237 4.7E-80 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1071 1.4E-7 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:1.10.10.1600 433 510 3.8E-34 T 12-10-2018 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:2.40.50.140 982 1074 2.0E-5 T 12-10-2018 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 5.2E-25 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 SUPERFAMILY SSF89550 6 263 6.47E-18 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 SMART SM00481 7 74 1.4E-29 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:3.20.20.140 1 270 2.2E-94 T 12-10-2018 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF02811 PHP domain 8 171 1.1E-43 T 12-10-2018 IPR004013 PHP domain GO:0003824 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Gene3D G3DSA:1.10.150.870 777 886 4.6E-5 T 12-10-2018 YpsIP31758_1028 580f2954006a6317a90a88dcfb22db5c 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 734 1.3E-177 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0800 6770aafa829138c3689880b1e551770a 587 Pfam PF05947 Type VI secretion system, TssF 6 584 4.0E-189 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_0800 6770aafa829138c3689880b1e551770a 587 PIRSF PIRSF028304 1 586 2.8E-161 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_0800 6770aafa829138c3689880b1e551770a 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 584 2.4E-172 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_2157 1eea8a5e321243e394a55db31bb40f55 175 Pfam PF01575 MaoC like domain 28 140 1.8E-18 T 12-10-2018 IPR002539 MaoC-like dehydratase domain YpsIP31758_2157 1eea8a5e321243e394a55db31bb40f55 175 SUPERFAMILY SSF54637 16 167 3.04E-46 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_2157 1eea8a5e321243e394a55db31bb40f55 175 Gene3D G3DSA:3.10.129.10 14 165 2.6E-49 T 12-10-2018 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF02911 Formyl transferase, C-terminal domain 203 283 1.4E-16 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF50486 205 304 3.14E-23 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 PIRSF PIRSF036506 1 660 0.0 T 12-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF53328 1 202 1.28E-55 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF00551 Formyl transferase 25 173 4.1E-24 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 SUPERFAMILY SSF51735 317 651 2.84E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.40.50.720 314 659 2.7E-122 T 12-10-2018 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 4.7E-42 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Gene3D G3DSA:3.40.50.12230 1 304 2.4E-104 T 12-10-2018 YpsIP31758_1727 c1d1ced2632a2df3d06ad922c3517c73 667 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.692 T 12-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 SUPERFAMILY SSF53218 180 327 4.32E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 1.1E-44 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 SMART SM00852 183 320 3.4E-43 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.8E-32 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Gene3D G3DSA:2.170.190.11 53 144 6.6E-145 T 12-10-2018 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Gene3D G3DSA:3.40.980.10 28 330 6.6E-145 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Gene3D G3DSA:3.90.105.10 29 177 6.6E-145 T 12-10-2018 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 SUPERFAMILY SSF63882 9 178 1.44E-54 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 3.3E-19 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 SUPERFAMILY SSF63867 330 410 1.7E-24 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Pfam PF00994 Probable molybdopterin binding domain 183 319 4.4E-26 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2480 744a3d34dd29d866a065bc557e4185d4 424 Gene3D G3DSA:2.40.340.10 331 401 6.6E-145 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2285 46825cb408b772932c6b39f394eeb8a8 120 Gene3D G3DSA:1.20.58.380 2 110 1.7E-33 T 12-10-2018 YpsIP31758_2285 46825cb408b772932c6b39f394eeb8a8 120 Pfam PF05400 Flagellar protein FliT 21 106 1.3E-20 T 12-10-2018 IPR008622 Flagellar protein FliT YpsIP31758_2285 46825cb408b772932c6b39f394eeb8a8 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 26.22 T 12-10-2018 IPR008622 Flagellar protein FliT YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 Pfam PF13356 Arm DNA-binding domain 4 90 4.5E-12 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 Gene3D G3DSA:3.30.160.390 2 104 7.3E-19 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 Pfam PF00589 Phage integrase family 214 384 1.4E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 Gene3D G3DSA:1.10.150.130 105 213 7.0E-40 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 SUPERFAMILY SSF56349 107 393 1.62E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0054 9dfe11ae6469ad547e6d25e9f1eca52f 422 Gene3D G3DSA:1.10.443.10 214 397 4.1E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 PIRSF PIRSF005900 8 167 4.4E-41 T 12-10-2018 IPR002177 DNA-binding protein Dps YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 SUPERFAMILY SSF47240 10 167 1.13E-46 T 12-10-2018 IPR009078 Ferritin-like superfamily YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 Pfam PF00210 Ferritin-like domain 30 166 5.3E-21 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 Gene3D G3DSA:1.20.1260.10 1 167 2.4E-52 T 12-10-2018 IPR012347 Ferritin-like YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.955 T 12-10-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.4E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.4E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps YpsIP31758_1497 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.4E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 Pfam PF00005 ABC transporter 17 165 2.4E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 SMART SM00382 26 213 8.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 SUPERFAMILY SSF52540 1 235 2.0E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 PIRSF PIRSF039085 1 240 1.2E-109 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_1493 e680de17c69c49f987945c1f81b3d323 240 Gene3D G3DSA:3.40.50.300 1 240 1.7E-79 T 12-10-2018 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Gene3D G3DSA:2.40.30.10 245 452 8.2E-75 T 12-10-2018 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 612 4.1E-269 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 SUPERFAMILY SSF52218 63 209 3.19E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Pfam PF00258 Flavodoxin 67 195 7.2E-31 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Gene3D G3DSA:1.20.990.10 293 397 8.2E-75 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 283 293 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 507 518 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 399 406 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 432 441 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 469 488 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 503 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 538 554 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 561 569 3.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Gene3D G3DSA:3.40.50.360 59 218 1.6E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Pfam PF00667 FAD binding domain 243 437 1.0E-26 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Pfam PF00175 Oxidoreductase NAD-binding domain 470 576 6.8E-20 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PIRSF PIRSF000207 1 612 5.0E-272 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 SUPERFAMILY SSF63380 240 459 1.55E-63 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Gene3D G3DSA:3.40.50.80 458 612 7.9E-59 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00369 Flavodoxin signature 113 124 4.1E-14 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00369 Flavodoxin signature 65 78 4.1E-14 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00369 Flavodoxin signature 169 188 4.1E-14 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 PRINTS PR00369 Flavodoxin signature 145 155 4.1E-14 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 SUPERFAMILY SSF52343 457 612 7.2E-52 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_3311 4cc7cc3d19a3a84d6f84a727b44aa84b 612 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 612 51.649 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 Gene3D G3DSA:2.40.50.530 1 65 2.1E-19 T 12-10-2018 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 Pfam PF01632 Ribosomal protein L35 2 60 2.7E-23 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.2E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.2E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.2E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-26 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.039 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1714 3900421b7bba8c1069ad460262660cfa 65 SUPERFAMILY SSF143034 2 64 1.44E-22 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2061 402873578710834bb101512c36068e04 565 TIGRFAM TIGR00815 sulP: sulfate permease 18 558 6.5E-131 T 12-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 YpsIP31758_2061 402873578710834bb101512c36068e04 565 Pfam PF00916 Sulfate permease family 29 414 2.6E-81 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YpsIP31758_2061 402873578710834bb101512c36068e04 565 Pfam PF01740 STAS domain 456 558 2.7E-8 T 12-10-2018 IPR002645 STAS domain YpsIP31758_2061 402873578710834bb101512c36068e04 565 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 YpsIP31758_2061 402873578710834bb101512c36068e04 565 SUPERFAMILY SSF52091 453 564 9.42E-13 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_2061 402873578710834bb101512c36068e04 565 Gene3D G3DSA:3.30.750.24 445 562 6.1E-22 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.1E-53 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 SUPERFAMILY SSF56214 3 125 1.7E-30 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.562 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 2.0E-44 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 Gene3D G3DSA:3.90.470.20 1 126 6.6E-40 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 6.4E-27 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_1140 e38275486819938d23347e15bd44e79c 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.3E-37 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 SMART SM00855 5 191 9.7E-28 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.8E-126 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 Gene3D G3DSA:3.40.50.1240 2 250 1.2E-92 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 128 1.9E-30 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 SUPERFAMILY SSF53254 4 247 3.3E-78 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.166 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 PIRSF PIRSF000709 3 116 3.7E-9 T 12-10-2018 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 PIRSF PIRSF000709 172 237 0.075 T 12-10-2018 YpsIP31758_2861 6b0446fb5ba0fc12a1c416885e5ea31b 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 407 451 1.3E-10 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 2.8E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 2.8E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 2.8E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.8E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 PRINTS PR01005 Flagellar hook-associated protein signature 444 453 2.8E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 Pfam PF00460 Flagella basal body rod protein 5 33 4.7E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 452 1.1E-120 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_0648 b4e09a684a66b5f10cffe84a42a0f380 453 SUPERFAMILY SSF64518 116 453 1.27E-22 T 12-10-2018 YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 SUPERFAMILY SSF53697 86 230 3.27E-31 T 12-10-2018 YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 Gene3D G3DSA:3.40.50.10490 80 246 3.4E-31 T 12-10-2018 YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 1.4E-14 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 Pfam PF01380 SIS domain 108 218 1.9E-15 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 Gene3D G3DSA:1.10.10.10 3 71 1.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2730 c2887b13287f35632ad8781e9a5ab2f8 246 SUPERFAMILY SSF46689 6 72 2.33E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0461 c11ac3d021a69d95fa331dab2f8bbc12 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.996 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid YpsIP31758_0461 c11ac3d021a69d95fa331dab2f8bbc12 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0461 c11ac3d021a69d95fa331dab2f8bbc12 130 SUPERFAMILY SSF54211 5 130 2.69E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_0461 c11ac3d021a69d95fa331dab2f8bbc12 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.6E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0461 c11ac3d021a69d95fa331dab2f8bbc12 130 Gene3D G3DSA:3.30.230.10 1 130 4.5E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_2891 c9a18911b1dfcc61e264e8bc0c62f0a0 94 Pfam PF03658 RnfH family Ubiquitin 4 86 7.1E-35 T 12-10-2018 IPR005346 RnfH protein YpsIP31758_2891 c9a18911b1dfcc61e264e8bc0c62f0a0 94 Gene3D G3DSA:3.10.20.280 1 88 3.8E-34 T 12-10-2018 IPR037021 RnfH superfamily YpsIP31758_2891 c9a18911b1dfcc61e264e8bc0c62f0a0 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 26.648 T 12-10-2018 IPR005346 RnfH protein YpsIP31758_2891 c9a18911b1dfcc61e264e8bc0c62f0a0 94 SUPERFAMILY SSF54285 4 78 1.05E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YpsIP31758_B0122 6ce11e2644d00e545d6d7d74efa02841 934 Pfam PF12696 TraM recognition site of TraD and TraG 426 545 1.9E-6 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site YpsIP31758_B0122 6ce11e2644d00e545d6d7d74efa02841 934 Gene3D G3DSA:3.40.50.300 331 565 1.3E-15 T 12-10-2018 YpsIP31758_B0122 6ce11e2644d00e545d6d7d74efa02841 934 Gene3D G3DSA:3.40.50.300 99 234 3.9E-10 T 12-10-2018 YpsIP31758_B0122 6ce11e2644d00e545d6d7d74efa02841 934 SUPERFAMILY SSF52540 110 558 2.52E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0122 6ce11e2644d00e545d6d7d74efa02841 934 SMART SM00382 129 287 0.006 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_A0001 1eaed069a2f1d497a0d88c4ea23384eb 418 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 40 340 2.5E-50 T 12-10-2018 IPR007001 Bacterial shufflon protein, N-terminal YpsIP31758_0316 cac6bdd5025dee3978d7e31106890353 606 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 606 9.7E-208 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_0316 cac6bdd5025dee3978d7e31106890353 606 Pfam PF05947 Type VI secretion system, TssF 5 605 5.4E-193 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_0316 cac6bdd5025dee3978d7e31106890353 606 PIRSF PIRSF028304 1 606 9.2E-184 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 9 204 3.3E-181 T 12-10-2018 YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.011 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 SUPERFAMILY SSF53686 4 389 2.1E-141 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 53 383 3.3E-181 T 12-10-2018 YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 PIRSF PIRSF001413 1 396 8.0E-170 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 4.0E-49 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_1936 6722c1f6860f31831fad201c62bf1c37 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.3E-188 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 Gene3D G3DSA:3.20.20.120 116 321 2.2E-57 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 109 3.6E-13 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 SUPERFAMILY SSF51604 118 319 4.19E-52 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 SMART SM00922 130 223 6.4E-17 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 SUPERFAMILY SSF54826 3 109 5.3E-27 T 12-10-2018 YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 Gene3D G3DSA:3.30.390.10 1 103 1.3E-26 T 12-10-2018 IPR029017 Enolase-like, N-terminal YpsIP31758_1796 2762de4fed138bdc03e0dc03b2c67395 324 Pfam PF13378 Enolase C-terminal domain-like 136 320 2.7E-23 T 12-10-2018 IPR029065 Enolase C-terminal domain-like YpsIP31758_1990 6f7133561740e213e9fda12890c959b7 256 Pfam PF06629 MltA-interacting protein MipA 35 255 2.4E-55 T 12-10-2018 IPR010583 MltA-interacting MipA YpsIP31758_1990 6f7133561740e213e9fda12890c959b7 256 Gene3D G3DSA:2.40.160.20 149 255 2.6E-5 T 12-10-2018 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.40.50.300 4 278 1.1E-153 T 12-10-2018 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF81271 279 359 6.1E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.1E-39 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:1.10.150.300 120 200 1.1E-153 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 PIRSF PIRSF006641 1 363 2.2E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.741 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF52540 3 301 4.5E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.0E-174 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.7E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_2075 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.10.20.30 48 362 1.1E-153 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_3107 92a5675e64e2f773b8f1be1b1c4863e0 196 Gene3D G3DSA:3.40.50.880 1 196 2.1E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3107 92a5675e64e2f773b8f1be1b1c4863e0 196 Pfam PF01965 DJ-1/PfpI family 4 169 2.4E-45 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 YpsIP31758_3107 92a5675e64e2f773b8f1be1b1c4863e0 196 SUPERFAMILY SSF52317 5 189 8.46E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3107 92a5675e64e2f773b8f1be1b1c4863e0 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 2.6E-65 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 Pfam PF01063 Amino-transferase class IV 24 247 5.0E-51 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 Gene3D G3DSA:3.30.470.10 1 108 3.0E-29 T 12-10-2018 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 SUPERFAMILY SSF56752 1 254 1.16E-67 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 Gene3D G3DSA:3.20.10.10 121 265 1.3E-50 T 12-10-2018 YpsIP31758_1581 a5d55eaf6e64622406922ee41cce4dd4 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 1.6E-116 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 YpsIP31758_1108 0911e57671ec89a3752b441e0c4dc9ad 562 PIRSF PIRSF001294 1 560 1.9E-240 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YpsIP31758_1108 0911e57671ec89a3752b441e0c4dc9ad 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 8.7E-242 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YpsIP31758_1108 0911e57671ec89a3752b441e0c4dc9ad 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.341 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YpsIP31758_1108 0911e57671ec89a3752b441e0c4dc9ad 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 2.7E-262 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 SUPERFAMILY SSF69255 466 553 6.02E-34 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Gene3D G3DSA:2.30.110.50 126 431 1.9E-93 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Gene3D G3DSA:2.40.50.230 459 559 2.2E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 SUPERFAMILY SSF69349 544 730 3.14E-36 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Pfam PF05954 Phage late control gene D protein (GPD) 134 431 6.6E-83 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 114 620 5.0E-201 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 SUPERFAMILY SSF69279 293 467 8.16E-42 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Gene3D G3DSA:2.20.220.20 660 730 7.7E-8 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 126 605 6.1E-192 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 SUPERFAMILY SSF69279 115 289 4.68E-56 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Gene3D G3DSA:3.55.50.10 202 293 1.9E-93 T 12-10-2018 YpsIP31758_0339 31864b907dcebff98f9a84ba5e69ee0f 732 Gene3D G3DSA:3.30.1920.30 325 388 1.9E-93 T 12-10-2018 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 Pfam PF00691 OmpA family 64 159 4.6E-18 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 95 110 3.8E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 65 87 3.8E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 110 126 3.8E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 168 7.6E-8 T 12-10-2018 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 110 127 7.6E-8 T 12-10-2018 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 128 147 7.6E-8 T 12-10-2018 YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 SUPERFAMILY SSF103088 51 165 2.09E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_3488 dbd3e98fda5f49fe2712b65fc25fc1ba 168 Gene3D G3DSA:3.30.1330.60 31 168 4.4E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SMART SM00491 474 603 2.4E-54 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Gene3D G3DSA:3.40.50.300 440 632 1.3E-35 T 12-10-2018 YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SMART SM00487 16 342 0.0019 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 13 232 4.08E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Pfam PF06733 DEAD_2 181 247 6.5E-5 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 SUPERFAMILY SSF52540 40 598 7.41E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Gene3D G3DSA:3.40.50.300 18 283 3.2E-46 T 12-10-2018 YpsIP31758_2017 0eb7c28d7d10559d9c57fd8fcc6eaff3 634 Pfam PF13307 Helicase C-terminal domain 459 616 3.4E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YpsIP31758_1543 b3aba4cee37b49c8075c303303617c50 452 SUPERFAMILY SSF103473 12 433 4.19E-68 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1543 b3aba4cee37b49c8075c303303617c50 452 Gene3D G3DSA:1.10.286.90 201 235 1.9E-6 T 12-10-2018 YpsIP31758_1543 b3aba4cee37b49c8075c303303617c50 452 Pfam PF00083 Sugar (and other) transporter 57 435 6.5E-56 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YpsIP31758_1543 b3aba4cee37b49c8075c303303617c50 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 Pfam PF00248 Aldo/keto reductase family 8 250 5.6E-46 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PIRSF PIRSF000097 1 266 6.7E-63 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 Gene3D G3DSA:3.20.20.100 1 267 7.4E-86 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 2.1E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 2.1E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 2.1E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.1E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.1E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1048 98ceb08c216593640af20f85e9757e87 267 SUPERFAMILY SSF51430 2 259 3.4E-76 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 SUPERFAMILY SSF52540 50 359 8.18E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 SUPERFAMILY SSF57829 424 466 3.3E-7 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 SMART SM00487 1 185 1.4E-16 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 Gene3D G3DSA:3.40.50.300 1 168 1.9E-28 T 12-10-2018 YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 Pfam PF00271 Helicase conserved C-terminal domain 242 343 9.5E-12 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 SMART SM00490 263 345 1.0E-9 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 Gene3D G3DSA:3.40.50.300 186 376 1.4E-33 T 12-10-2018 YpsIP31758_2719 1116155f8acd2f4a494746f97b094da0 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 5.1E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YpsIP31758_2206 34cefb2532d71f69f37920c1f4b1d17a 630 Pfam PF00959 Phage lysozyme 450 522 6.3E-5 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YpsIP31758_2206 34cefb2532d71f69f37920c1f4b1d17a 630 Gene3D G3DSA:1.10.530.10 424 571 5.6E-46 T 12-10-2018 YpsIP31758_2206 34cefb2532d71f69f37920c1f4b1d17a 630 SUPERFAMILY SSF53955 425 563 2.25E-33 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3256 6ac6d345cce541b983bb3a08216620e0 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 2.8E-20 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YpsIP31758_3256 6ac6d345cce541b983bb3a08216620e0 176 SUPERFAMILY SSF81342 3 172 3.45E-25 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 YpsIP31758_3809 bc1917175c3cce57f570bba1878ddd88 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 12-10-2018 IPR001455 TusA-like domain YpsIP31758_3809 bc1917175c3cce57f570bba1878ddd88 89 Gene3D G3DSA:3.30.110.40 17 89 1.5E-30 T 12-10-2018 IPR036868 TusA-like domain superfamily YpsIP31758_3809 bc1917175c3cce57f570bba1878ddd88 89 Pfam PF01206 Sulfurtransferase TusA 21 89 2.4E-19 T 12-10-2018 IPR001455 TusA-like domain YpsIP31758_3809 bc1917175c3cce57f570bba1878ddd88 89 SUPERFAMILY SSF64307 10 89 2.09E-24 T 12-10-2018 IPR036868 TusA-like domain superfamily YpsIP31758_2628 b156399faa7b0f7802c2feee3147d610 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 214 1.0E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2628 b156399faa7b0f7802c2feee3147d610 222 SUPERFAMILY SSF161098 6 200 1.83E-28 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2628 b156399faa7b0f7802c2feee3147d610 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.9E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_2628 b156399faa7b0f7802c2feee3147d610 222 Gene3D G3DSA:1.10.3720.10 1 216 1.1E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 SMART SM00382 28 221 6.7E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 SUPERFAMILY SSF52540 4 243 3.17E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 Gene3D G3DSA:3.40.50.300 1 251 7.1E-80 T 12-10-2018 YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 PIRSF PIRSF039085 1 249 9.5E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_2272 0958ae21fdd1393d21e0753ff05a5911 253 Pfam PF00005 ABC transporter 19 173 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 SUPERFAMILY SSF47616 179 325 1.39E-36 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 PIRSF PIRSF015753 4 324 6.8E-133 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 SUPERFAMILY SSF52833 42 163 1.64E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 Gene3D G3DSA:1.20.1050.10 174 284 8.0E-137 T 12-10-2018 YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 272 1.0E-12 T 12-10-2018 YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 2.6E-24 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YpsIP31758_0479 af13aa82d8833d5a4e308227c974341f 328 Gene3D G3DSA:3.40.30.130 21 316 8.0E-137 T 12-10-2018 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PIRSF PIRSF000097 1 116 3.6E-38 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PIRSF PIRSF000097 110 270 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 SUPERFAMILY SSF51430 2 262 7.46E-89 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 Pfam PF00248 Aldo/keto reductase family 15 257 3.8E-48 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 8.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 8.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 8.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 8.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 8.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 Gene3D G3DSA:3.20.20.100 1 283 8.5E-128 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_2998 ceb856ea59c1551be7db947514fe0cff 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 4.7E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF48498 83 194 3.02E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 106.255 T 12-10-2018 IPR017757 Transcriptional repressor BetI YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.7E-80 T 12-10-2018 IPR017757 Transcriptional repressor BetI YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF46689 6 78 2.31E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 192 3.9E-34 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal YpsIP31758_2829 29924ab08b2947524e13f5bc1a84a2e6 198 Gene3D G3DSA:1.10.357.10 6 196 4.1E-46 T 12-10-2018 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 PIRSF PIRSF005763 1 263 1.9E-94 T 12-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 SUPERFAMILY SSF50331 122 191 4.37E-19 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 4.2E-38 T 12-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Gene3D G3DSA:1.10.10.10 1 107 1.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 SUPERFAMILY SSF50331 171 259 2.08E-15 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.1E-26 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Pfam PF03459 TOBE domain 124 188 2.7E-15 T 12-10-2018 IPR005116 Transport-associated OB, type 1 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Pfam PF03459 TOBE domain 198 258 1.5E-10 T 12-10-2018 IPR005116 Transport-associated OB, type 1 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Gene3D G3DSA:2.40.50.100 183 253 3.1E-18 T 12-10-2018 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.6E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 SUPERFAMILY SSF46785 2 103 3.85E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2852 e5b57e4291d41e9881229c6aa7069953 263 Gene3D G3DSA:2.40.50.100 108 182 9.7E-24 T 12-10-2018 YpsIP31758_2815 0c3ea767f739636cbc898825c501c49c 368 Pfam PF12698 ABC-2 family transporter protein 25 355 9.7E-50 T 12-10-2018 YpsIP31758_2815 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_2815 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_2815 0c3ea767f739636cbc898825c501c49c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 SMART SM00347 46 148 5.0E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 Gene3D G3DSA:1.10.10.10 7 164 6.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 SUPERFAMILY SSF46785 21 165 2.12E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3200 ff8e1f90ec3232ca99d633b736c3f540 170 Pfam PF01047 MarR family 53 112 5.6E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1369 21cb8aca0e0885cc009500b2a0f7967b 161 SUPERFAMILY SSF141452 2 159 9.02E-52 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_1369 21cb8aca0e0885cc009500b2a0f7967b 161 Gene3D G3DSA:2.30.110.20 4 161 7.0E-66 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_1369 21cb8aca0e0885cc009500b2a0f7967b 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.9E-40 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_1369 21cb8aca0e0885cc009500b2a0f7967b 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 145 2.8E-20 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 Gene3D G3DSA:2.40.50.100 289 350 6.0E-15 T 12-10-2018 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 2.9E-151 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 Pfam PF03459 TOBE domain 290 349 7.8E-17 T 12-10-2018 IPR005116 Transport-associated OB, type 1 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 Gene3D G3DSA:3.40.50.300 10 229 1.4E-53 T 12-10-2018 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 SUPERFAMILY SSF52540 7 221 1.15E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 Pfam PF00005 ABC transporter 17 156 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 SMART SM00382 23 206 7.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 290 349 6.3E-17 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 YpsIP31758_2848 5827eaaa03cfd2dc8630c607bb122866 359 SUPERFAMILY SSF50331 235 350 1.04E-23 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0548 efdcd43318d890f4b112cff09d8b4b6d 185 Pfam PF02661 Fic/DOC family 42 139 1.4E-14 T 12-10-2018 IPR003812 Fido domain YpsIP31758_0548 efdcd43318d890f4b112cff09d8b4b6d 185 Gene3D G3DSA:1.10.3290.10 1 185 3.5E-39 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_0548 efdcd43318d890f4b112cff09d8b4b6d 185 SUPERFAMILY SSF140931 28 183 4.58E-31 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 583 8.7E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SMART SM00091 245 311 3.0E-7 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SUPERFAMILY SSF55874 427 586 1.57E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Pfam PF00989 PAS fold 249 352 4.6E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Pfam PF00512 His Kinase A (phospho-acceptor) domain 372 432 3.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SUPERFAMILY SSF47384 363 433 4.51E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 582 4.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 4.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 563 4.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 4.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Gene3D G3DSA:3.30.565.10 437 591 2.0E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 244 361 8.5E-12 T 12-10-2018 IPR000014 PAS domain YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Pfam PF17203 Single cache domain 3 74 119 4.3E-7 T 12-10-2018 IPR033463 Single cache domain 3 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Gene3D G3DSA:1.10.287.130 358 434 3.2E-19 T 12-10-2018 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SMART SM00387 478 585 6.9E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 Gene3D G3DSA:3.30.450.20 234 357 2.6E-17 T 12-10-2018 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SMART SM00388 370 436 8.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SUPERFAMILY SSF103190 37 159 7.85E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily YpsIP31758_2821 447f1c1e30fcc2715ee0e7ae1700c718 604 SUPERFAMILY SSF55785 257 364 7.04E-14 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_3626 0c67cb0520820538d8b9fa8b14e9d1db 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 7.9E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_3626 0c67cb0520820538d8b9fa8b14e9d1db 212 SUPERFAMILY SSF55068 8 208 7.72E-81 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_3626 0c67cb0520820538d8b9fa8b14e9d1db 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 8.3E-66 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_3626 0c67cb0520820538d8b9fa8b14e9d1db 212 Gene3D G3DSA:3.30.1060.10 4 212 1.4E-86 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_3626 0c67cb0520820538d8b9fa8b14e9d1db 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.44 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 SUPERFAMILY SSF50249 3 69 1.49E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 SMART SM00357 6 70 3.3E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 Gene3D G3DSA:2.40.50.140 2 69 4.4E-29 T 12-10-2018 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 PIRSF PIRSF002599 1 70 2.1E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_1070 2a87be951f9f5e5360ee4d71855f0ca3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 SUPERFAMILY SSF46785 8 91 1.69E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 Pfam PF03466 LysR substrate binding domain 120 280 3.3E-18 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 Gene3D G3DSA:3.40.190.290 112 288 3.4E-13 T 12-10-2018 YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 SUPERFAMILY SSF53850 93 288 6.64E-23 T 12-10-2018 YpsIP31758_0478 4da070f5da2512349adb1d8e876a361e 297 Gene3D G3DSA:1.10.10.10 6 94 5.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0139 2d2b73e35bb5173731c4db42d347d5a1 211 Gene3D G3DSA:1.10.357.10 53 210 1.7E-42 T 12-10-2018 YpsIP31758_0139 2d2b73e35bb5173731c4db42d347d5a1 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 52.821 T 12-10-2018 IPR023764 Transcriptional repressor HTH, FabR YpsIP31758_0139 2d2b73e35bb5173731c4db42d347d5a1 211 SUPERFAMILY SSF46689 3 77 2.32E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0139 2d2b73e35bb5173731c4db42d347d5a1 211 Gene3D G3DSA:1.10.10.60 2 52 1.8E-22 T 12-10-2018 YpsIP31758_0139 2d2b73e35bb5173731c4db42d347d5a1 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 299 362 2.1E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF50800 3 264 8.37E-17 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF03473 MOSC domain 140 262 2.6E-28 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF03476 MOSC N-terminal beta barrel domain 3 117 2.4E-29 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF54292 283 367 1.14E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF141673 5 133 2.62E-29 T 12-10-2018 YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 Gene3D G3DSA:3.10.20.30 276 369 9.0E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_2553 85563fdb6234f3cc98aaa9c88ad1bda0 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.2E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 SUPERFAMILY SSF55785 23 114 6.81E-25 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 Gene3D G3DSA:3.30.450.20 18 145 2.5E-23 T 12-10-2018 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 Gene3D G3DSA:1.10.287.950 216 517 2.1E-78 T 12-10-2018 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 Pfam PF08447 PAS fold 31 114 4.6E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 SUPERFAMILY SSF58104 242 516 1.31E-65 T 12-10-2018 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 3.9E-12 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 SMART SM00086 80 120 0.0025 T 12-10-2018 IPR001610 PAC motif YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 SMART SM00283 269 516 2.4E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-40 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-40 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-40 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1618 98317b179a7e35a4bee33963506ac7e4 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-40 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_0893 8648d78151eecbc4f1daf9c9feff25de 66 Gene3D G3DSA:1.10.238.160 5 63 4.0E-6 T 12-10-2018 YpsIP31758_0893 8648d78151eecbc4f1daf9c9feff25de 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.9E-18 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA YpsIP31758_0893 8648d78151eecbc4f1daf9c9feff25de 66 SUPERFAMILY SSF46955 6 63 3.66E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3511 0ca883845875645455f27a8a65de582f 361 Gene3D G3DSA:2.160.20.10 41 361 6.9E-132 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_3511 0ca883845875645455f27a8a65de582f 361 Pfam PF01095 Pectinesterase 31 335 9.3E-38 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 YpsIP31758_3511 0ca883845875645455f27a8a65de582f 361 SUPERFAMILY SSF51126 28 357 1.33E-59 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 725 752 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 42 2.5E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:3.40.50.740 51 325 7.5E-74 T 12-10-2018 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 SUPERFAMILY SSF53706 57 690 1.96E-155 T 12-10-2018 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 12 808 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:2.40.40.20 663 808 5.2E-41 T 12-10-2018 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 113 9.4E-8 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF00384 Molybdopterin oxidoreductase 117 567 6.0E-77 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 SMART SM00926 54 114 2.9E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Pfam PF01568 Molydopterin dinucleotide binding domain 689 800 2.6E-28 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 SUPERFAMILY SSF50692 634 808 7.05E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_1344 df958b0d8e0281c1b9ab54e0d32367ad 808 Gene3D G3DSA:3.40.50.740 366 614 1.6E-43 T 12-10-2018 YpsIP31758_0867 05562fe16a978ff22cee7c73b2d5b5ac 145 Pfam PF13924 Lipocalin-like domain 7 143 4.1E-45 T 12-10-2018 IPR024311 Lipocalin-like domain YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 275 504 2.1E-67 T 12-10-2018 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 267 504 4.23E-65 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 506 727 5.32E-46 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 654 919 4.1E-130 T 12-10-2018 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 27 273 5.1E-79 T 12-10-2018 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF16187 Middle or third domain of peptidase_M16 402 676 1.1E-55 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 506 887 4.1E-130 T 12-10-2018 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 35 263 6.23E-52 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 740 933 2.0E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 1.6E-33 T 12-10-2018 IPR011765 Peptidase M16, N-terminal YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 683 859 2.1E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal YpsIP31758_0990 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 218 394 6.1E-19 T 12-10-2018 IPR007863 Peptidase M16, C-terminal YpsIP31758_1009 b989c9d2c8daa1939c9314eed8647913 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 3.7E-55 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 YpsIP31758_1009 b989c9d2c8daa1939c9314eed8647913 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 YpsIP31758_1009 b989c9d2c8daa1939c9314eed8647913 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.444 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:1.20.1090.10 162 363 1.2E-57 T 12-10-2018 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:3.40.50.1970 12 160 9.1E-25 T 12-10-2018 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 PIRSF PIRSF000112 2 363 5.8E-114 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 SUPERFAMILY SSF56796 10 357 1.83E-61 T 12-10-2018 YpsIP31758_2422 c7421fb27747acdf88ca873d623be70d 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 350 1.2E-46 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 SMART SM00530 18 79 1.7E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 Pfam PF13413 Helix-turn-helix domain 18 79 2.4E-15 T 12-10-2018 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 Pfam PF13464 Domain of unknown function (DUF4115) 286 360 9.0E-24 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 Gene3D G3DSA:1.10.260.40 4 111 7.0E-21 T 12-10-2018 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 SUPERFAMILY SSF47413 12 81 4.56E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1185 e7b8e2dcace45e4c3ef9eaf88a5446e8 363 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 363 42.92 T 12-10-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 YpsIP31758_1220 9141858ec74fec1b2bc675b17b196f62 421 Gene3D G3DSA:1.10.3720.10 156 419 1.2E-48 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1220 9141858ec74fec1b2bc675b17b196f62 421 SUPERFAMILY SSF161098 195 412 4.71E-43 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1220 9141858ec74fec1b2bc675b17b196f62 421 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 221 409 1.6E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2183 1ad415208b745c5015e552974debb5d7 84 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 73 8.8E-24 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 YpsIP31758_2183 1ad415208b745c5015e552974debb5d7 84 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 73 9.7E-25 T 12-10-2018 IPR006531 Gp5 N-terminal YpsIP31758_2183 1ad415208b745c5015e552974debb5d7 84 Gene3D G3DSA:2.40.50.230 4 83 3.2E-26 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.0E-79 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF02132 RecR protein 41 77 2.1E-14 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 Gene3D G3DSA:1.10.8.420 1 53 6.7E-19 T 12-10-2018 YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF13662 Toprim domain 82 172 9.8E-21 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 Gene3D G3DSA:3.40.1360.10 77 199 6.8E-38 T 12-10-2018 YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.192 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 SMART SM00493 81 166 1.1E-17 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_3057 7c8908940156382c6f6bf42dbb322abd 201 SUPERFAMILY SSF111304 2 199 4.58E-70 T 12-10-2018 IPR023627 Recombination protein RecR YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.6E-89 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 19.019 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:1.10.1790.20 1135 1314 1.4E-59 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:1.10.150.390 1316 1375 2.7E-28 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.4E-18 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 SUPERFAMILY SSF64484 16 1364 0.0 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.50.100 948 1022 1.6E-26 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:1.10.274.100 490 637 6.6E-33 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.50.100 1151 1215 1.4E-59 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.50.100 1023 1126 7.2E-29 T 12-10-2018 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.5E-27 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:1.10.132.30 638 790 4.3E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_3859 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 4.0E-79 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Gene3D G3DSA:3.40.50.300 274 632 2.2E-133 T 12-10-2018 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Gene3D G3DSA:3.40.50.300 4 266 4.7E-99 T 12-10-2018 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 SUPERFAMILY SSF52540 2 639 3.94E-160 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.3E-70 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.651 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Gene3D G3DSA:1.10.10.160 108 181 4.7E-99 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Gene3D G3DSA:1.10.486.10 377 544 2.2E-133 T 12-10-2018 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YpsIP31758_0175 eb05388ce522621530b29d6fff9b8e2f 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.5E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 1.9E-92 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 Gene3D G3DSA:3.20.20.10 1 232 4.7E-82 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 SUPERFAMILY SSF51419 1 225 8.77E-80 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 PIRSF PIRSF004848 1 232 2.4E-75 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 Pfam PF01168 Alanine racemase, N-terminal domain 7 227 5.5E-27 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_0830 a61d7c924282d18a4282fa02b0a82400 232 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 32.945 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 Gene3D G3DSA:3.30.420.40 3 314 2.0E-132 T 12-10-2018 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 4.1E-126 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 SUPERFAMILY SSF53067 1 309 3.74E-43 T 12-10-2018 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-52 T 12-10-2018 IPR017861 Kae1/TsaD family YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 Pfam PF00814 Glycoprotease family 24 307 1.0E-102 T 12-10-2018 IPR000905 Gcp-like domain YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 Gene3D G3DSA:3.30.420.40 129 293 2.0E-132 T 12-10-2018 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.249 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 YpsIP31758_0556 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.6E-135 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 Gene3D G3DSA:3.40.50.2300 1 120 5.7E-32 T 12-10-2018 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 SUPERFAMILY SSF52172 1 126 1.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 9.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 Gene3D G3DSA:1.10.10.10 121 227 1.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 Pfam PF00072 Response regulator receiver domain 3 111 4.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 SUPERFAMILY SSF46894 127 226 3.12E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 SMART SM00448 1 111 1.0E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1313 0692bcd814f8902b298e3c83face3e53 227 SMART SM00862 150 226 8.6E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 PIRSF PIRSF002936 1 302 5.8E-155 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 SUPERFAMILY SSF52402 6 209 1.01E-74 T 12-10-2018 YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.9E-166 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.1E-64 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 Gene3D G3DSA:3.40.50.620 7 212 1.4E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3304 aacf8b0209fb2666861e3a669070cfad 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.492 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YpsIP31758_0931 3dbe260e913c3673f43d14965909f04c 535 Pfam PF00884 Sulfatase 34 384 2.6E-73 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_0931 3dbe260e913c3673f43d14965909f04c 535 Gene3D G3DSA:3.30.1120.10 450 517 3.8E-12 T 12-10-2018 YpsIP31758_0931 3dbe260e913c3673f43d14965909f04c 535 ProSitePatterns PS00149 Sulfatases signature 2. 151 161 - T 12-10-2018 IPR024607 Sulfatase, conserved site YpsIP31758_0931 3dbe260e913c3673f43d14965909f04c 535 Gene3D G3DSA:3.40.720.10 30 429 3.1E-98 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_0931 3dbe260e913c3673f43d14965909f04c 535 SUPERFAMILY SSF53649 32 519 2.76E-108 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF54862 665 837 2.65E-22 T 12-10-2018 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.920.10 417 624 4.5E-73 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.9E-14 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.970 1 254 1.3E-106 T 12-10-2018 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 6.2E-35 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.920 255 416 5.2E-54 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52518 794 1164 8.99E-118 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 9.2E-9 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 3.5E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.40.50.970 793 1170 2.2E-150 T 12-10-2018 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF10371 Domain of unknown function 627 678 1.1E-23 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52922 255 410 4.14E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:4.10.780.10 633 668 4.2E-7 T 12-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 PIRSF PIRSF000159 1 1177 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 6.6E-81 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SMART SM00890 622 679 2.2E-30 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF52518 2 254 2.35E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 SUPERFAMILY SSF53323 417 668 2.62E-73 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YpsIP31758_1803 014c0e7d63f72914f14860db914eb8e2 1177 Gene3D G3DSA:3.30.70.20 669 791 3.2E-38 T 12-10-2018 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:3.90.70.10 10 158 7.0E-40 T 12-10-2018 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF00664 ABC transporter transmembrane region 178 443 5.7E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:1.20.1560.10 163 478 6.0E-64 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF00005 ABC transporter 510 658 8.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 SUPERFAMILY SSF90123 166 473 3.66E-58 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 SUPERFAMILY SSF52540 489 700 1.14E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Pfam PF03412 Peptidase C39 family 21 149 1.9E-35 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 Gene3D G3DSA:3.40.50.300 487 704 2.2E-68 T 12-10-2018 YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 SMART SM00382 518 702 2.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0105 feaf9b7355686e8dddfbb3b453f89c1f 704 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 SUPERFAMILY SSF55205 1 419 2.62E-147 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.4E-186 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.564 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 21 229 2.4E-174 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 6.4E-127 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 YpsIP31758_0454 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 7 414 2.4E-174 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Gene3D G3DSA:2.160.20.10 42 282 5.3E-55 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 72 155 2.5E-11 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 SUPERFAMILY SSF51126 46 388 2.17E-37 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF13332 Haemagluttinin repeat 821 900 0.0086 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF13332 Haemagluttinin repeat 937 1095 2.7E-9 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF13332 Haemagluttinin repeat 405 468 0.01 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF13332 Haemagluttinin repeat 632 777 5.7E-10 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF13332 Haemagluttinin repeat 1216 1382 3.9E-16 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 SMART SM00912 54 174 1.1E-30 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_2044 f933a1076c78c44593d23df542fc3c69 1615 Pfam PF05860 haemagglutination activity domain 53 171 1.0E-21 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.30.300.30 1398 1483 8.1E-13 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF47336 1489 1563 2.49E-9 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 603 996 4.0E-111 T 12-10-2018 IPR010071 Amino acid adenylation domain YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF53474 1597 1883 6.11E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.40.50.150 1107 1397 9.3E-45 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF56801 543 1477 1.44E-126 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.30.300.30 966 1096 7.6E-11 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.30.559.30 249 522 4.9E-79 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Pfam PF00501 AMP-binding enzyme 585 972 1.5E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF52777 253 511 3.0E-40 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 ProSitePatterns PS00455 Putative AMP-binding domain signature. 715 726 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF52777 77 263 2.22E-17 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:1.10.1200.10 1484 1568 4.8E-14 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1516 1531 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.30.559.10 76 246 2.1E-37 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Pfam PF00668 Condensation domain 117 511 1.4E-28 T 12-10-2018 IPR001242 Condensation domain YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Pfam PF08242 Methyltransferase domain 1247 1346 1.2E-16 T 12-10-2018 IPR013217 Methyltransferase type 12 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Pfam PF00975 Thioesterase domain 1601 1699 4.6E-13 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:3.40.50.12780 569 964 6.5E-105 T 12-10-2018 YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Pfam PF00550 Phosphopantetheine attachment site 1506 1562 2.5E-4 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 SUPERFAMILY SSF53335 1222 1414 3.34E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0684 9e55a42a104e24e5277bdaf86fbfec8d 1888 Gene3D G3DSA:1.10.10.1830 12 65 3.0E-12 T 12-10-2018 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF46785 4 110 6.16E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:3.40.190.290 89 294 2.0E-63 T 12-10-2018 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.7E-110 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:1.10.10.10 2 83 1.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF03466 LysR substrate binding domain 93 287 3.4E-13 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF53850 93 290 2.53E-19 T 12-10-2018 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0854 92db65c5b5d3ac6c726effcea5ab76f8 302 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.444 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YpsIP31758_2713 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 339 1.2E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2713 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Gene3D G3DSA:1.10.3720.10 132 336 5.4E-17 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2713 839f279ac9e76dcbbce83bd0cc6cdfe8 342 SUPERFAMILY SSF161098 137 322 1.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2713 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 50 1.2E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YpsIP31758_0022 b858999102eff2e0dcf3d3eb962f8031 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.446 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 YpsIP31758_0022 b858999102eff2e0dcf3d3eb962f8031 216 Pfam PF01926 50S ribosome-binding GTPase 30 148 6.4E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_0022 b858999102eff2e0dcf3d3eb962f8031 216 SUPERFAMILY SSF52540 19 201 1.4E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0022 b858999102eff2e0dcf3d3eb962f8031 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 6.8E-73 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 YpsIP31758_0022 b858999102eff2e0dcf3d3eb962f8031 216 Gene3D G3DSA:3.40.50.300 4 205 9.4E-58 T 12-10-2018 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 163 1.9E-5 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 SUPERFAMILY SSF55681 6 209 6.05E-70 T 12-10-2018 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 Gene3D G3DSA:3.30.930.10 4 208 2.9E-62 T 12-10-2018 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 7.0E-25 T 12-10-2018 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 PIRSF PIRSF016262 5 217 3.0E-58 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 Hamap MF_00013 Octanoyltransferase [lipB]. 9 210 37.2 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2954 4fd6904654964871fcb43f97e39ae79d 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 207 5.6E-73 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_0338 c1825cacc04e4144dda2694927b1f383 58 Pfam PF12486 Type VI secretion system, EvfB, or VasL 1 51 2.4E-17 T 12-10-2018 IPR021069 ImpA, C-terminal YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 3 148 7.9E-53 T 12-10-2018 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 170 252 2.0E-27 T 12-10-2018 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.5E-28 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.5E-28 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.5E-28 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 2.5E-28 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 253 377 2.0E-27 T 12-10-2018 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.30.310.50 379 460 1.3E-24 T 12-10-2018 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 151 259 3.37E-26 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 374 3.7E-21 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 3 175 6.67E-39 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 3.2E-17 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 454 4.4E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 261 371 1.96E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 130 3.5E-34 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1525 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF55957 377 459 6.8E-17 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3374 ca1f41166baf7da78d53d76208115ee7 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 1.9E-63 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YpsIP31758_3374 ca1f41166baf7da78d53d76208115ee7 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.735 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YpsIP31758_3374 ca1f41166baf7da78d53d76208115ee7 206 Gene3D G3DSA:3.40.50.300 1 206 9.6E-69 T 12-10-2018 YpsIP31758_3374 ca1f41166baf7da78d53d76208115ee7 206 SUPERFAMILY SSF52540 1 190 3.58E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3374 ca1f41166baf7da78d53d76208115ee7 206 Pfam PF01121 Dephospho-CoA kinase 3 177 2.3E-73 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YpsIP31758_2355 27908e4e45cf0d7baf78d06042693a46 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.3E-55 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 YpsIP31758_2355 27908e4e45cf0d7baf78d06042693a46 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.4E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit YpsIP31758_2355 27908e4e45cf0d7baf78d06042693a46 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.4E-223 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 YpsIP31758_2355 27908e4e45cf0d7baf78d06042693a46 454 SUPERFAMILY SSF143548 16 157 2.33E-45 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 YpsIP31758_2355 27908e4e45cf0d7baf78d06042693a46 454 Gene3D G3DSA:3.30.1330.90 10 159 1.4E-51 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 YpsIP31758_0119 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 75 127 2.0E-22 T 12-10-2018 IPR008024 YiaAB two helix YpsIP31758_0119 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 12 64 7.1E-21 T 12-10-2018 IPR008024 YiaAB two helix YpsIP31758_2376 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 PIRSF PIRSF018249 1 271 4.6E-84 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 YpsIP31758_2376 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 Pfam PF13847 Methyltransferase domain 86 199 3.3E-11 T 12-10-2018 IPR025714 Methyltransferase domain YpsIP31758_2376 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 Gene3D G3DSA:3.40.50.150 1 272 9.4E-79 T 12-10-2018 YpsIP31758_2376 0dd6dcccb63e9e0d79dc4f6dae3c13a4 279 SUPERFAMILY SSF53335 4 242 3.29E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 Gene3D G3DSA:2.40.420.20 288 378 6.9E-20 T 12-10-2018 YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 Gene3D G3DSA:2.40.50.100 62 205 1.3E-67 T 12-10-2018 YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 SUPERFAMILY SSF111369 52 300 3.01E-56 T 12-10-2018 YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 Gene3D G3DSA:2.40.30.170 56 287 1.3E-67 T 12-10-2018 YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 220 3.0E-8 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 Gene3D G3DSA:1.10.287.470 97 170 1.3E-67 T 12-10-2018 YpsIP31758_0667 8026c220b8b0159753bf6afa06ad35e1 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 376 1.0E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_1235 cafcf28fa34854d7ab4b0d07c9ae6835 208 SUPERFAMILY SSF53271 4 206 7.47E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_1235 cafcf28fa34854d7ab4b0d07c9ae6835 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.4E-64 T 12-10-2018 YpsIP31758_1235 cafcf28fa34854d7ab4b0d07c9ae6835 208 Gene3D G3DSA:3.40.50.2020 1 208 5.9E-72 T 12-10-2018 YpsIP31758_1235 cafcf28fa34854d7ab4b0d07c9ae6835 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.0E-89 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 YpsIP31758_1235 cafcf28fa34854d7ab4b0d07c9ae6835 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.831 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 SMART SM00382 35 235 1.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 SMART SM00382 312 502 3.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 SUPERFAMILY SSF52540 279 525 3.17E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 Gene3D G3DSA:3.40.50.300 4 274 5.4E-78 T 12-10-2018 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 Gene3D G3DSA:3.40.50.300 275 529 1.1E-81 T 12-10-2018 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 Pfam PF00005 ABC transporter 303 454 3.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 SUPERFAMILY SSF52540 6 257 1.38E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 260 3.7E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2714 8e7bcb64f352b206d9d492a1e5e680f1 530 Pfam PF00005 ABC transporter 27 185 2.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1699 61658c4b0522d65c1f618cee69f377a1 184 Pfam PF14002 YniB-like protein 15 179 6.1E-80 T 12-10-2018 IPR025229 YniB-like protein YpsIP31758_1699 61658c4b0522d65c1f618cee69f377a1 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 1.0E-101 T 12-10-2018 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 335 354 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 151 171 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 2.4E-39 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 SUPERFAMILY SSF55486 3 499 1.22E-123 T 12-10-2018 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 498 2.1E-94 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 Gene3D G3DSA:1.10.1370.30 1 499 7.9E-201 T 12-10-2018 YpsIP31758_1824 7b3964e75bc83b87be41e52a723d9148 499 PIRSF PIRSF006615 1 499 3.1E-202 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 YpsIP31758_1770 80fd90e18e706b221cbedcec303435e3 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.236 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 YpsIP31758_1770 80fd90e18e706b221cbedcec303435e3 370 Gene3D G3DSA:3.30.420.40 145 327 4.7E-132 T 12-10-2018 YpsIP31758_1770 80fd90e18e706b221cbedcec303435e3 370 Gene3D G3DSA:3.30.420.40 11 362 4.7E-132 T 12-10-2018 YpsIP31758_1770 80fd90e18e706b221cbedcec303435e3 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 3.1E-163 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 YpsIP31758_1770 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 6 341 8.85E-28 T 12-10-2018 YpsIP31758_2364 d825063415ba041129c55627c878bc0a 254 SUPERFAMILY SSF56529 38 245 1.7E-71 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2364 d825063415ba041129c55627c878bc0a 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 2.2E-114 T 12-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 YpsIP31758_2364 d825063415ba041129c55627c878bc0a 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 1.3E-58 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YpsIP31758_2364 d825063415ba041129c55627c878bc0a 254 Gene3D G3DSA:3.90.850.10 36 248 1.4E-74 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 SMART SM00382 348 492 6.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PIRSF PIRSF001174 1 775 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:1.10.8.60 491 584 5.1E-33 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.30.230.10 585 772 1.6E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.40.50.300 314 490 4.9E-61 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:1.20.58.1480 120 245 3.2E-47 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 9.7E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 7.2E-44 T 12-10-2018 IPR003111 Lon, substrate-binding domain YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF88697 10 201 7.46E-53 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF52540 313 586 3.95E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 4.0E-56 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 4.0E-56 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 4.0E-56 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 4.0E-56 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 4.0E-56 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:2.30.130.40 1 118 3.7E-38 T 12-10-2018 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.135 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 SMART SM00464 10 202 5.0E-84 T 12-10-2018 IPR003111 Lon, substrate-binding domain YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.3E-96 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 YpsIP31758_3090 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF54211 595 770 1.48E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.9E-42 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 Gene3D G3DSA:3.30.360.10 131 238 5.8E-102 T 12-10-2018 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 3.4E-41 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.899 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 SUPERFAMILY SSF55347 131 240 1.37E-37 T 12-10-2018 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 PIRSF PIRSF000161 4 272 9.8E-89 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 Gene3D G3DSA:3.40.50.720 7 268 5.8E-102 T 12-10-2018 YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 SUPERFAMILY SSF51735 4 272 1.23E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3455 099096d593d8477a91692819bfec6468 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 7.2E-105 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:3.30.200.20 16 126 7.5E-5 T 12-10-2018 YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:1.10.510.10 135 229 1.2E-18 T 12-10-2018 YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 Pfam PF01163 RIO1 family 31 219 9.7E-44 T 12-10-2018 YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 SUPERFAMILY SSF56112 18 226 4.87E-21 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 12-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 YpsIP31758_2390 53d0676c93c743ffef02e18ba0dedf10 283 SMART SM00090 5 228 2.5E-15 T 12-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 YpsIP31758_3100 74551218fb637163cb9b5703efd00a34 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 2.0E-14 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3100 74551218fb637163cb9b5703efd00a34 204 SUPERFAMILY SSF81452 21 202 7.19E-58 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3100 74551218fb637163cb9b5703efd00a34 204 Gene3D G3DSA:1.20.120.80 19 204 8.0E-60 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3100 74551218fb637163cb9b5703efd00a34 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.3E-86 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 YpsIP31758_2920 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 34 279 7.6E-100 T 12-10-2018 YpsIP31758_2920 a23d13698fb21c51a28fe0db7ba3f12d 305 SMART SM00062 44 276 6.0E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2920 a23d13698fb21c51a28fe0db7ba3f12d 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 274 2.8E-46 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2920 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 138 233 7.6E-100 T 12-10-2018 YpsIP31758_2920 a23d13698fb21c51a28fe0db7ba3f12d 305 SUPERFAMILY SSF53850 3 277 6.73E-62 T 12-10-2018 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 124 1.2E-63 T 12-10-2018 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 7.5E-43 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.9E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3921 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0959 174fdfb0149facc2136a4ecab437ce9d 318 SUPERFAMILY SSF158544 203 264 1.54E-12 T 12-10-2018 IPR038072 GspK, central domain superfamily YpsIP31758_0959 174fdfb0149facc2136a4ecab437ce9d 318 PIRSF PIRSF002786 1 318 4.4E-63 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YpsIP31758_0959 174fdfb0149facc2136a4ecab437ce9d 318 Pfam PF03934 Type II secretion system (T2SS), protein K 36 301 2.7E-18 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YpsIP31758_0320 485f868e3f9e91d268436ef3fbfb2f87 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 6.9E-154 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_0320 485f868e3f9e91d268436ef3fbfb2f87 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 1.2E-158 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 Pfam PF00455 DeoR C terminal sensor domain 75 234 9.9E-49 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-11 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 Gene3D G3DSA:1.10.10.10 1 58 9.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 SUPERFAMILY SSF100950 74 234 6.51E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 SMART SM01134 73 236 3.1E-61 T 12-10-2018 YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 SUPERFAMILY SSF46785 4 63 3.87E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2746 b1d684292209706c80be23d6caa9c748 269 SMART SM00420 6 58 7.8E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 Gene3D G3DSA:3.40.50.300 2 228 9.7E-62 T 12-10-2018 YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 SMART SM00382 24 209 1.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 Pfam PF00005 ABC transporter 19 157 9.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 SUPERFAMILY SSF52540 1 220 2.92E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3416 3db649e67330167345c0e6e2f22aa3b1 236 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 4.1E-102 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 92 8.1E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 9.4E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3639 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_0067 1a3f83fd512d03c88f0878a17cca4916 425 SUPERFAMILY SSF53756 57 420 2.67E-16 T 12-10-2018 YpsIP31758_0067 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF00534 Glycosyl transferases group 1 288 398 4.8E-10 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 YpsIP31758_0067 1a3f83fd512d03c88f0878a17cca4916 425 Gene3D G3DSA:3.40.50.11720 41 209 1.4E-47 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 YpsIP31758_0067 1a3f83fd512d03c88f0878a17cca4916 425 Gene3D G3DSA:3.40.50.2000 217 403 5.0E-66 T 12-10-2018 YpsIP31758_0067 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 2.4E-66 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 2.0E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 Gene3D G3DSA:1.20.120.30 22 191 5.9E-42 T 12-10-2018 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 SUPERFAMILY SSF58104 234 515 3.92E-74 T 12-10-2018 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 SMART SM00319 44 180 5.1E-30 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 SMART SM00304 214 266 4.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 SMART SM00283 267 514 5.7E-96 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 5.3E-80 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 Gene3D G3DSA:1.10.287.950 214 516 7.8E-93 T 12-10-2018 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 Pfam PF02203 Tar ligand binding domain homologue 1 170 3.3E-51 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 Pfam PF00672 HAMP domain 216 261 8.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 SUPERFAMILY SSF47170 38 178 1.44E-41 T 12-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YpsIP31758_1643 8895fb818d42c4bacc37978d14c41afc 536 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 12-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YpsIP31758_1050 6c71531046d9384ca6d03144ab125465 260 SUPERFAMILY SSF56219 43 258 3.66E-25 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YpsIP31758_1050 6c71531046d9384ca6d03144ab125465 260 Gene3D G3DSA:3.60.10.10 42 260 2.2E-18 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YpsIP31758_1050 6c71531046d9384ca6d03144ab125465 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 167 251 1.4E-7 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 92 3.9E-43 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 2.3E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3911 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2561 2fc00771aa9aa904ce9578b54beb907f 215 Gene3D G3DSA:3.60.15.10 1 210 2.9E-86 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2561 2fc00771aa9aa904ce9578b54beb907f 215 SUPERFAMILY SSF56281 2 209 4.32E-61 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2561 2fc00771aa9aa904ce9578b54beb907f 215 SMART SM00849 12 192 5.6E-44 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2561 2fc00771aa9aa904ce9578b54beb907f 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.2E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00664 ABC transporter transmembrane region 27 297 3.4E-60 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:3.40.50.300 329 581 1.1E-95 T 12-10-2018 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00005 ABC transporter 359 509 7.2E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF52540 332 580 3.79E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 SMART SM00382 368 555 2.0E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 2.9E-264 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF90123 14 327 1.24E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2577 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:1.20.1560.10 2 328 8.0E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 SUPERFAMILY SSF55594 286 374 3.93E-23 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 SUPERFAMILY SSF55804 2 140 5.36E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 Pfam PF00381 PTS HPr component phosphorylation site 287 368 1.2E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 Gene3D G3DSA:3.30.1340.10 285 370 1.5E-25 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.2E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 SUPERFAMILY SSF55804 148 276 1.92E-13 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 8.8E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 8.8E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 8.8E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.1E-29 T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_2683 58f6562dd6c705cd2d46d651b65ea275 377 Gene3D G3DSA:3.40.930.10 1 142 1.9E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 Gene3D G3DSA:3.40.190.290 92 293 1.8E-55 T 12-10-2018 YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 SUPERFAMILY SSF53850 89 295 5.43E-41 T 12-10-2018 YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 Gene3D G3DSA:1.10.10.10 3 87 8.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 SUPERFAMILY SSF46785 4 84 1.85E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0547 128610d2fec32f7b1e9f55835f79abfa 318 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_4028 c85ee702d511a1216898b04ded8720e9 314 SUPERFAMILY SSF53822 7 308 3.53E-78 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_4028 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 34 293 7.8E-109 T 12-10-2018 YpsIP31758_4028 c85ee702d511a1216898b04ded8720e9 314 Pfam PF13407 Periplasmic binding protein domain 30 286 1.1E-55 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_4028 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 129 304 7.8E-109 T 12-10-2018 YpsIP31758_0428 8c8f2f814ecf1c5303e73918ea04ae38 128 PIRSF PIRSF000029 1 128 2.2E-60 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YpsIP31758_0428 8c8f2f814ecf1c5303e73918ea04ae38 128 SUPERFAMILY SSF47175 23 128 5.18E-36 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YpsIP31758_0428 8c8f2f814ecf1c5303e73918ea04ae38 128 Gene3D G3DSA:1.20.120.10 18 128 1.5E-41 T 12-10-2018 YpsIP31758_0428 8c8f2f814ecf1c5303e73918ea04ae38 128 Pfam PF07361 Cytochrome b562 25 128 5.8E-32 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YpsIP31758_1984 a50364ae0ff652186612859c052d326f 215 Pfam PF00857 Isochorismatase family 4 205 3.3E-36 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 YpsIP31758_1984 a50364ae0ff652186612859c052d326f 215 Gene3D G3DSA:3.40.50.850 1 210 5.8E-64 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 YpsIP31758_1984 a50364ae0ff652186612859c052d326f 215 SUPERFAMILY SSF52499 2 211 1.14E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 SUPERFAMILY SSF52518 421 639 2.68E-54 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 203 8.6E-33 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 SUPERFAMILY SSF52467 192 376 2.91E-41 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Gene3D G3DSA:3.40.50.970 5 216 4.2E-34 T 12-10-2018 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Gene3D G3DSA:3.40.50.1220 221 397 4.9E-36 T 12-10-2018 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 444 603 4.1E-40 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 480 499 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 SUPERFAMILY SSF52518 8 216 4.05E-33 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 227 360 1.0E-30 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 Gene3D G3DSA:3.40.50.970 416 616 6.5E-48 T 12-10-2018 YpsIP31758_2976 9d518423059616c4b03376701a232bd0 648 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 12 646 6.3E-280 T 12-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 8.0E-8 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 2.4E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.30.56.50 2 50 8.4E-26 T 12-10-2018 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.604 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF52540 390 559 5.26E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.40.50.10050 685 792 6.1E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF46955 3 50 4.94E-13 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF50447 565 646 4.91E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 9.2E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:2.40.30.10 793 890 2.0E-34 T 12-10-2018 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 4.6E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 4.1E-291 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:3.40.50.300 389 562 1.5E-72 T 12-10-2018 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF50447 792 889 5.89E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 3.1E-35 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 550 9.9E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Gene3D G3DSA:2.40.30.10 563 681 1.1E-39 T 12-10-2018 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 Pfam PF11987 Translation-initiation factor 2 676 781 2.2E-36 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 YpsIP31758_3596 34b2e5fea219fac73e35ef9a926b122e 892 SUPERFAMILY SSF52156 669 798 1.09E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Gene3D G3DSA:1.10.225.40 353 440 2.2E-41 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.174 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 75 - T 12-10-2018 IPR010916 TonB box, conserved site YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17192 MukF middle domain 121 281 5.1E-85 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 12-10-2018 IPR036141 MukF, middle domain superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Gene3D G3DSA:1.20.58.590 119 311 1.6E-87 T 12-10-2018 IPR036141 MukF, middle domain superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Gene3D G3DSA:1.10.10.10 24 118 1.0E-52 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17193 MukF C-terminal domain 283 440 1.3E-78 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 PIRSF PIRSF018282 1 440 4.6E-247 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF46785 8 118 5.17E-50 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2567 178e753a18dad2312dfb19151d7fe966 440 Pfam PF03882 MukF winged-helix domain 3 117 3.2E-58 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain YpsIP31758_0740 db75dff45e17f86965d29e6564f2a411 91 Pfam PF03811 InsA N-terminal domain 1 36 3.8E-9 T 12-10-2018 IPR003220 InsA N-terminal domain GO:0006313 YpsIP31758_0740 db75dff45e17f86965d29e6564f2a411 91 Pfam PF12759 InsA C-terminal domain 43 88 2.1E-20 T 12-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YpsIP31758_0735 db75dff45e17f86965d29e6564f2a411 91 Pfam PF03811 InsA N-terminal domain 1 36 3.8E-9 T 12-10-2018 IPR003220 InsA N-terminal domain GO:0006313 YpsIP31758_0735 db75dff45e17f86965d29e6564f2a411 91 Pfam PF12759 InsA C-terminal domain 43 88 2.1E-20 T 12-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.30.63.10 37 96 7.0E-74 T 12-10-2018 YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 SMART SM00072 3 187 4.6E-80 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.052 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.6E-74 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 SUPERFAMILY SSF52540 3 189 1.58E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 Pfam PF00625 Guanylate kinase 5 186 1.4E-66 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YpsIP31758_0041 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 8 183 7.0E-74 T 12-10-2018 YpsIP31758_0216 1eecf44797e6cab923e34896d13623f5 156 SUPERFAMILY SSF54637 13 155 1.0E-24 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_0216 1eecf44797e6cab923e34896d13623f5 156 Pfam PF03061 Thioesterase superfamily 58 143 1.9E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 YpsIP31758_0216 1eecf44797e6cab923e34896d13623f5 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 2.8E-15 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 YpsIP31758_0216 1eecf44797e6cab923e34896d13623f5 156 Gene3D G3DSA:3.10.129.10 4 156 2.3E-48 T 12-10-2018 YpsIP31758_1597 a1f00152dd38ddd23ae095932cda2cc1 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.5E-10 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 31 337 6.9E-142 T 12-10-2018 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PIRSF PIRSF019574 1 369 4.4E-142 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 135 363 6.9E-142 T 12-10-2018 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 2.3E-75 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 1.7E-32 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_2645 fe686d400499aa0d8655e7f2650be2ce 369 SUPERFAMILY SSF53850 29 368 3.51E-102 T 12-10-2018 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SMART SM00322 552 617 3.3E-12 T 12-10-2018 IPR004087 K Homology domain GO:0003676 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.8E-26 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54211 293 488 4.66E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 PIRSF PIRSF005499 2 705 4.6E-300 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF55666 450 548 6.59E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54211 5 144 7.59E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF00013 KH domain 556 614 5.6E-9 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.230.70 236 549 6.8E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF55666 145 235 2.24E-30 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF00575 S1 RNA binding domain 619 690 1.9E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.230.70 4 235 3.5E-78 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SMART SM00316 620 690 6.6E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF50249 620 695 1.04E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.2E-21 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 3.0E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54791 554 639 1.25E-22 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF46915 238 320 4.18E-19 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 8.4E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.4E-5 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.1370.10 550 621 5.7E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:2.40.50.140 622 693 1.5E-28 T 12-10-2018 YpsIP31758_3592 501383f999637018710f52eac7325c7e 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.374 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YpsIP31758_1981 0d1f4efabfc296d45e4602e98ee885f8 183 Pfam PF00881 Nitroreductase family 8 161 1.7E-21 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 YpsIP31758_1981 0d1f4efabfc296d45e4602e98ee885f8 183 SUPERFAMILY SSF55469 1 177 2.62E-38 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YpsIP31758_1981 0d1f4efabfc296d45e4602e98ee885f8 183 PIRSF PIRSF000232 1 182 2.4E-62 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YpsIP31758_1981 0d1f4efabfc296d45e4602e98ee885f8 183 Gene3D G3DSA:3.40.109.10 1 183 5.8E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YpsIP31758_3976 45ce53a4442fb25d1dfc86181590990f 135 Pfam PF01479 S4 domain 11 57 1.1E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3976 45ce53a4442fb25d1dfc86181590990f 135 Gene3D G3DSA:3.10.290.10 3 110 3.7E-39 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_3976 45ce53a4442fb25d1dfc86181590990f 135 PIRSF PIRSF016821 8 135 1.3E-42 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 YpsIP31758_3976 45ce53a4442fb25d1dfc86181590990f 135 SUPERFAMILY SSF55174 10 106 7.59E-31 T 12-10-2018 YpsIP31758_3976 45ce53a4442fb25d1dfc86181590990f 135 SMART SM00363 11 72 9.8E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50104 6 64 5.78E-18 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 67 128 2.61E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 130 187 1.25E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 6.8E-24 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 130 188 4.5E-28 T 12-10-2018 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.30.30.30 1 65 5.9E-27 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 PIRSF PIRSF005901 2 188 3.7E-66 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.8E-76 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 66 129 6.1E-30 T 12-10-2018 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.817 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 SMART SM01185 69 123 2.3E-25 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.2E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.9E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YpsIP31758_3672 58cd7022ddf1a6e46315783910d450ef 188 SMART SM00841 131 186 9.5E-33 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF51197 10 109 3.43E-37 T 12-10-2018 YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF53335 75 282 6.39E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF09313 Domain of unknown function (DUF1971) 16 96 3.4E-30 T 12-10-2018 IPR015392 Domain of unknown function DUF1971 YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF03848 Tellurite resistance protein TehB 98 290 2.8E-112 T 12-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:3.40.50.150 115 294 7.1E-42 T 12-10-2018 YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 PIRSF PIRSF005215 1 295 5.2E-150 T 12-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:2.60.120.10 9 114 4.8E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_2133 15966b8b8bc4e3e67cb30a2e5674cee7 295 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 56 293 4.0E-110 T 12-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 SUPERFAMILY SSF56672 1 234 5.96E-92 T 12-10-2018 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:3.30.70.270 4 164 1.1E-64 T 12-10-2018 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.322 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 341 3.7E-9 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:2.30.40.20 21 73 1.1E-64 T 12-10-2018 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF11798 IMS family HHH motif 169 197 5.7E-8 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Pfam PF00817 impB/mucB/samB family 7 154 2.5E-48 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:1.10.150.20 166 228 8.4E-19 T 12-10-2018 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 Gene3D G3DSA:3.30.1490.100 237 351 5.4E-30 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_3157 21a2ba3044456609e622ca05e3b555cf 352 SUPERFAMILY SSF100879 241 350 8.79E-28 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 269 2.0E-99 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 SMART SM00936 289 380 6.0E-34 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 4.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 4.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 4.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 Gene3D G3DSA:2.60.410.10 289 380 9.8E-28 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 SUPERFAMILY SSF56601 10 289 1.13E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 SUPERFAMILY SSF69189 289 382 2.94E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 Gene3D G3DSA:3.40.710.10 27 288 5.2E-90 T 12-10-2018 YpsIP31758_2952 d332f0f780332436d81ff8d25b5969ae 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 380 8.2E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3671 56535fcb6f4afc72afb033514c17ac8c 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-32 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 YpsIP31758_3671 56535fcb6f4afc72afb033514c17ac8c 104 Gene3D G3DSA:1.10.3730.20 1 104 3.7E-33 T 12-10-2018 YpsIP31758_3671 56535fcb6f4afc72afb033514c17ac8c 104 SUPERFAMILY SSF103481 5 103 1.83E-21 T 12-10-2018 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 SMART SM01240 7 344 5.1E-139 T 12-10-2018 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.7E-198 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 PIRSF PIRSF000235 1 347 2.5E-200 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 SUPERFAMILY SSF51412 7 335 3.53E-100 T 12-10-2018 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.526 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.4E-79 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 YpsIP31758_3373 6e8aaaefb5aacf41f9412dd8ea577aea 347 Gene3D G3DSA:3.20.20.70 1 345 9.5E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 2.5E-209 T 12-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 PIRSF PIRSF000538 2 542 9.9E-77 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 4 263 2.95E-60 T 12-10-2018 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.40 5 513 1.1E-227 T 12-10-2018 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 280 532 4.53E-56 T 12-10-2018 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 2.7E-40 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.460 323 525 1.1E-227 T 12-10-2018 YpsIP31758_0368 b5532775c0068183802ff244d35ff0b1 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 1.7E-30 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00388 280 350 5.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.5E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:3.30.565.10 352 509 9.6E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF55874 340 501 1.83E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF47384 265 347 3.73E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:1.10.287.130 274 349 1.2E-17 T 12-10-2018 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00387 391 502 6.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 501 4.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1305 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 155 170 1.3E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 45 54 1.3E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 118 135 1.3E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 90 111 1.3E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 190 205 1.3E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.10 175 269 2.6E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49354 41 172 5.79E-36 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 45 173 1.1E-36 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 195 265 5.0E-17 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49584 167 269 2.35E-19 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.10 45 171 8.8E-42 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2677 75b2f67f489a700656698a647969b436 273 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 117 134 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 SUPERFAMILY SSF53822 290 688 3.24E-79 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Gene3D G3DSA:1.25.40.650 180 287 2.6E-41 T 12-10-2018 YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 38 683 37.355 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Gene3D G3DSA:1.25.40.10 56 179 1.2E-43 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Pfam PF04348 LppC putative lipoprotein 361 683 3.0E-91 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Pfam PF04348 LppC putative lipoprotein 72 318 2.4E-53 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA YpsIP31758_0475 880610a7caf9348d54753c89f988c67b 689 Gene3D G3DSA:3.40.50.2300 492 676 9.8E-25 T 12-10-2018 YpsIP31758_3587 ff594fde28501ad0463330cbd4badfee 351 Gene3D G3DSA:3.20.20.30 14 343 6.7E-96 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 YpsIP31758_3587 ff594fde28501ad0463330cbd4badfee 351 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 20 340 1.7E-137 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 YpsIP31758_3587 ff594fde28501ad0463330cbd4badfee 351 SUPERFAMILY SSF51679 19 340 2.62E-82 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 YpsIP31758_3587 ff594fde28501ad0463330cbd4badfee 351 Pfam PF00296 Luciferase-like monooxygenase 34 255 4.8E-29 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 Gene3D G3DSA:1.20.1250.20 254 453 3.6E-12 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.0E-8 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.0E-8 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.0E-8 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.0E-8 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.0E-8 T 12-10-2018 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 42.468 T 12-10-2018 IPR023721 Multidrug resistance protein MdtD, putative YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 SUPERFAMILY SSF103473 9 451 9.29E-58 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 433 7.0E-69 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 Pfam PF07690 Major Facilitator Superfamily 15 405 1.1E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1212 341f5371cfef77164dbcd102f0dd5fd3 465 Gene3D G3DSA:1.20.1720.10 12 253 1.0E-44 T 12-10-2018 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 3.9E-34 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YpsIP31758_4181 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.9E-119 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 Gene3D G3DSA:3.40.50.1370 8 304 2.9E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.4E-47 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 Gene3D G3DSA:3.40.50.1370 135 292 2.9E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 SUPERFAMILY SSF53671 4 306 4.16E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.736 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.6E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.6E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.6E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.6E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0436 a951642b531823fc3958f9b4e54f9748 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 6.2E-28 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.337 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 9.6E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 2.6E-95 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 SUPERFAMILY SSF50475 20 217 5.05E-67 T 12-10-2018 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 PIRSF PIRSF000190 1 217 4.8E-82 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 2.7E-23 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 YpsIP31758_1772 54ba31f1aa33bf7b5b8bbfe6f2233ee6 217 Gene3D G3DSA:2.30.110.10 19 217 2.2E-77 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 SMART SM00479 7 184 7.4E-52 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 2.1E-94 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 2.0E-89 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 Pfam PF00929 Exonuclease 9 175 2.7E-40 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 Gene3D G3DSA:3.30.420.10 3 190 1.1E-60 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 SUPERFAMILY SSF53098 3 185 1.34E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_1055 1047eaca77205968cffd1900de9452a5 254 Gene3D G3DSA:3.20.20.140 208 254 8.5E-8 T 12-10-2018 YpsIP31758_0613 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Pfam PF00419 Fimbrial protein 32 175 8.5E-16 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_0613 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 SUPERFAMILY SSF49401 30 176 2.44E-36 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_0613 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Gene3D G3DSA:2.60.40.1090 30 175 3.6E-35 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_1413 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Pfam PF00419 Fimbrial protein 32 175 8.5E-16 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_1413 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 SUPERFAMILY SSF49401 30 176 2.44E-36 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1413 31f4b7eb7b7dfceeec6a5a36472ac9d6 176 Gene3D G3DSA:2.60.40.1090 30 175 3.6E-35 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF55874 6 216 7.46E-69 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF54211 218 383 3.03E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 SMART SM00387 28 174 1.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.40.50.670 391 624 4.4E-94 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF00204 DNA gyrase B 219 385 1.5E-39 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF01751 Toprim domain 414 523 3.3E-12 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.062 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 6.3E-24 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 SMART SM00433 35 625 6.0E-209 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 4.4E-154 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 8.8E-59 T 12-10-2018 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.30.565.10 4 216 5.7E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.30.230.10 217 390 8.9E-59 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF56719 389 622 2.28E-77 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_0578 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 2.6E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 Gene3D G3DSA:3.40.50.2000 6 471 4.1E-207 T 12-10-2018 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 SUPERFAMILY SSF53756 12 814 0.0 T 12-10-2018 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 PIRSF PIRSF000460 2 815 3.9E-231 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_4002 4393eafe0e7ff625aa80aaadb5ced5e6 815 Gene3D G3DSA:3.40.50.2000 472 795 8.6E-148 T 12-10-2018 YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 Gene3D G3DSA:3.40.50.300 222 502 7.2E-106 T 12-10-2018 YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 SUPERFAMILY SSF160246 11 75 1.07E-11 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 Gene3D G3DSA:3.30.450.90 88 221 3.2E-49 T 12-10-2018 YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 SMART SM00382 249 367 0.0027 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 13 494 6.7E-191 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 316 330 - T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 SUPERFAMILY SSF52540 105 494 1.61E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 Pfam PF00437 Type II/IV secretion system protein 122 388 2.9E-84 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0954 967419c501a032dbfea0531b23f0f29b 503 Gene3D G3DSA:3.30.300.160 4 87 1.7E-7 T 12-10-2018 YpsIP31758_3118 ad04a9c4e9eb6d14471c207a0dc82de9 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.5E-75 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YpsIP31758_3118 ad04a9c4e9eb6d14471c207a0dc82de9 149 Pfam PF03477 ATP cone domain 50 136 5.9E-16 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 YpsIP31758_3118 ad04a9c4e9eb6d14471c207a0dc82de9 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.723 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YpsIP31758_B0066 4e795ae86fccc920fdbc9d89c76c29f7 410 SUPERFAMILY SSF103473 7 393 1.03E-38 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_B0066 4e795ae86fccc920fdbc9d89c76c29f7 410 Gene3D G3DSA:1.20.1250.20 4 395 6.4E-36 T 12-10-2018 YpsIP31758_B0066 4e795ae86fccc920fdbc9d89c76c29f7 410 Pfam PF07690 Major Facilitator Superfamily 16 362 1.5E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0474 340e6b3e0cad4db6a2d59eece76c899f 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.0E-38 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 YpsIP31758_0474 340e6b3e0cad4db6a2d59eece76c899f 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 1.3E-23 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 YpsIP31758_0474 340e6b3e0cad4db6a2d59eece76c899f 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 23.456 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 YpsIP31758_0474 340e6b3e0cad4db6a2d59eece76c899f 117 SUPERFAMILY SSF52980 4 112 5.79E-21 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_0474 340e6b3e0cad4db6a2d59eece76c899f 117 Gene3D G3DSA:3.40.1350.10 10 117 7.3E-30 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:3.40.50.2300 161 295 2.7E-41 T 12-10-2018 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 326 3.3E-48 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SUPERFAMILY SSF53822 69 333 1.29E-38 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.2E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:1.10.260.40 1 58 3.5E-17 T 12-10-2018 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SMART SM00354 1 73 7.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SUPERFAMILY SSF47413 1 59 1.13E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:3.40.50.2300 72 310 2.7E-41 T 12-10-2018 YpsIP31758_1616 d1b7172ffa87ca38a7c226a9dd8f2c43 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 PIRSF PIRSF000445 1 420 5.1E-155 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.3E-49 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.703 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69742 1 158 7.59E-48 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Gene3D G3DSA:3.40.50.720 161 313 8.7E-45 T 12-10-2018 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF51735 162 315 8.21E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.9E-158 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Gene3D G3DSA:3.30.460.30 1 158 4.4E-59 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 6.0E-49 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.2E-23 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_2067 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69075 317 418 1.01E-27 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SMART SM00982 1005 1105 1.2E-47 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF141259 468 545 5.36E-24 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.40.50.11180 24 334 2.5E-129 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.40.50.11140 354 450 4.0E-36 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:2.30.30.840 480 538 4.7E-235 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.30.2060.10 128 213 2.5E-129 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF52540 8 341 4.69E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 9.6E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 2.3E-24 T 12-10-2018 IPR003711 CarD-like/TRCF domain YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF52540 779 987 5.92E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Pfam PF03461 TRCF domain 1007 1097 2.7E-27 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SMART SM00487 597 787 6.0E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SMART SM00490 823 907 1.4E-19 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1140 27.715 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF52540 520 780 2.45E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.40.50.300 475 987 4.7E-235 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF143517 992 1144 6.93E-44 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.90.1150.50 1001 1148 1.5E-46 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SMART SM01058 476 573 6.0E-51 T 12-10-2018 IPR003711 CarD-like/TRCF domain YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Gene3D G3DSA:3.40.50.300 539 778 4.7E-235 T 12-10-2018 YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 SUPERFAMILY SSF52540 351 463 2.71E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1598 c122256d488fa323083a796a79b6ed3d 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.3E-17 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1542 70e1c48b1e8e677b6667d3eab2c8fdb3 167 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 3 156 1.8E-42 T 12-10-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 YpsIP31758_1542 70e1c48b1e8e677b6667d3eab2c8fdb3 167 SUPERFAMILY SSF54211 1 164 1.59E-56 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_1542 70e1c48b1e8e677b6667d3eab2c8fdb3 167 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 5 162 2.0E-55 T 12-10-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 YpsIP31758_1542 70e1c48b1e8e677b6667d3eab2c8fdb3 167 Gene3D G3DSA:3.30.230.60 1 165 7.1E-57 T 12-10-2018 IPR037075 Formaldehyde-activating enzyme superfamily GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00421 147 204 7.7E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00448 3 116 1.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF46894 141 210 1.36E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 Gene3D G3DSA:3.40.50.12740 4 210 1.7E-54 T 12-10-2018 YpsIP31758_2160 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF52172 2 131 3.98E-30 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF75138 229 353 1.57E-25 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.50.10950 398 708 1.6E-135 T 12-10-2018 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF53659 392 709 1.89E-93 T 12-10-2018 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.9E-136 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.1E-127 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF13500 AAA domain 3 229 2.2E-51 T 12-10-2018 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.50.300 5 207 2.9E-11 T 12-10-2018 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.1390.20 225 365 1.2E-14 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF07085 DRTGG domain 233 344 6.4E-29 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 PIRSF PIRSF006107 1 714 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.50.10750 529 682 1.6E-135 T 12-10-2018 YpsIP31758_1442 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF52540 3 240 9.03E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.4E-92 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 SUPERFAMILY SSF50447 1 208 2.38E-80 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.005 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.30.10 128 209 5.5E-19 T 12-10-2018 YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 Pfam PF00297 Ribosomal protein L3 94 182 1.2E-12 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site YpsIP31758_3915 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.50.620 32 94 6.1E-15 T 12-10-2018 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Gene3D G3DSA:1.10.1780.10 1 160 3.9E-39 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Pfam PF07724 AAA domain (Cdc48 subfamily) 619 785 7.6E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Gene3D G3DSA:3.40.50.300 378 566 2.2E-47 T 12-10-2018 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 364 5.9E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 1.1E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 623 641 1.1E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 697 715 1.1E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 730 744 1.1E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SUPERFAMILY SSF81923 15 123 1.94E-17 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 791 869 5.1E-15 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Gene3D G3DSA:1.10.8.60 791 885 1.1E-13 T 12-10-2018 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SUPERFAMILY SSF52540 190 535 4.94E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Gene3D G3DSA:3.40.50.300 189 377 4.8E-61 T 12-10-2018 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 863 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SMART SM01086 791 882 1.5E-14 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SUPERFAMILY SSF52540 568 860 4.0E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Gene3D G3DSA:3.40.50.300 572 789 1.7E-63 T 12-10-2018 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 653 671 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 25 74 0.0029 T 12-10-2018 IPR004176 Clp, N-terminal YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SMART SM00382 619 770 3.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1362 80d785e3507850dff131cf0844179943 885 SMART SM00382 228 369 2.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 SUPERFAMILY SSF49354 34 166 3.14E-36 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 SUPERFAMILY SSF49584 160 262 1.44E-11 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 Gene3D G3DSA:2.60.40.10 42 166 4.0E-38 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 Gene3D G3DSA:2.60.40.10 170 267 1.2E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 120 137 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 PRINTS PR00969 Pili chaperone signature 40 49 3.4E-30 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 PRINTS PR00969 Pili chaperone signature 187 202 3.4E-30 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 PRINTS PR00969 Pili chaperone signature 121 138 3.4E-30 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 PRINTS PR00969 Pili chaperone signature 148 163 3.4E-30 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 PRINTS PR00969 Pili chaperone signature 91 112 3.4E-30 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 39 166 2.5E-39 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_1679 fcb05f2bfdc63022681bfca480dbf8d8 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 192 258 4.5E-11 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Pfam PF00263 Bacterial type II and III secretion system protein 416 581 3.4E-50 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 526 559 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 590 1.3E-142 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Gene3D G3DSA:3.30.1370.120 267 345 3.2E-14 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Gene3D G3DSA:3.30.1370.120 194 262 1.4E-13 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Pfam PF03958 Bacterial type II/III secretion system short domain 196 265 5.7E-9 T 12-10-2018 IPR005644 NolW-like YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Pfam PF03958 Bacterial type II/III secretion system short domain 131 191 7.5E-11 T 12-10-2018 IPR005644 NolW-like YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Pfam PF03958 Bacterial type II/III secretion system short domain 270 347 1.9E-14 T 12-10-2018 IPR005644 NolW-like YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 Gene3D G3DSA:3.30.1370.120 27 190 6.0E-48 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 436 2.1E-35 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 2.1E-35 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 2.1E-35 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 2.1E-35 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0953 d5d23a65b8e0524105aec0dd19e19545 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 2.1E-35 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_3371 bb536271f3cdcf0df7913888e98be54b 512 Gene3D G3DSA:3.40.50.300 235 506 5.6E-101 T 12-10-2018 YpsIP31758_3371 bb536271f3cdcf0df7913888e98be54b 512 SUPERFAMILY SSF52540 110 502 2.45E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3371 bb536271f3cdcf0df7913888e98be54b 512 Gene3D G3DSA:3.30.450.90 102 234 2.4E-43 T 12-10-2018 YpsIP31758_3371 bb536271f3cdcf0df7913888e98be54b 512 Pfam PF00437 Type II/IV secretion system protein 139 400 1.2E-83 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_3371 bb536271f3cdcf0df7913888e98be54b 512 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 328 342 - T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:1.10.287.130 116 191 4.2E-14 T 12-10-2018 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00091 7 75 6.2E-7 T 12-10-2018 IPR000014 PAS domain YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.565.10 192 348 1.2E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55785 11 97 1.35E-5 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00387 233 349 8.1E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00989 PAS fold 11 98 4.3E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55874 198 346 4.32E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF47384 121 190 7.46E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 4.8E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.450.20 9 112 1.1E-16 T 12-10-2018 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00388 129 194 1.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0026 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 3.5E-69 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 Gene3D G3DSA:3.10.420.10 1 152 1.0E-62 T 12-10-2018 IPR035958 SecB-like superfamily YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.7E-41 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.7E-41 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.7E-41 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.7E-41 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.658 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 SUPERFAMILY SSF54611 2 141 2.4E-53 T 12-10-2018 IPR035958 SecB-like superfamily YpsIP31758_0078 75b036a4a4126578e953652e051d25b3 158 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.5E-57 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 290 49.236 T 12-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 119 270 8.4E-79 T 12-10-2018 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 Pfam PF00480 ROK family 5 288 3.9E-70 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 ProSitePatterns PS01125 ROK family signature. 129 156 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 SUPERFAMILY SSF53067 3 288 6.72E-53 T 12-10-2018 YpsIP31758_1295 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 6 283 8.4E-79 T 12-10-2018 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 Gene3D G3DSA:1.10.150.20 162 251 4.4E-27 T 12-10-2018 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 159 1.0E-31 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 SUPERFAMILY SSF88723 4 159 7.36E-41 T 12-10-2018 IPR029060 PIN-like domain superfamily YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 8.5E-24 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 SMART SM00475 3 250 2.4E-92 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 SUPERFAMILY SSF47807 160 241 4.64E-21 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 Gene3D G3DSA:3.40.50.1010 1 161 2.1E-59 T 12-10-2018 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 SMART SM00279 162 197 2.1E-9 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YpsIP31758_1002 891854477ecffdb5265be2d017718d00 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.106 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 SUPERFAMILY SSF52540 271 487 4.3E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 SUPERFAMILY SSF52540 5 224 5.74E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 Gene3D G3DSA:3.40.50.300 261 506 8.9E-45 T 12-10-2018 YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 SMART SM00382 280 485 6.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 SMART SM00382 31 218 6.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 Pfam PF00005 ABC transporter 22 171 6.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 Gene3D G3DSA:3.40.50.300 1 241 8.2E-59 T 12-10-2018 YpsIP31758_4030 e4d9cbf2a0b01830cc72899de9064bbc 507 Pfam PF00005 ABC transporter 272 425 3.5E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 5.7E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 Gene3D G3DSA:3.30.1340.10 1 85 5.1E-31 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 SUPERFAMILY SSF55594 4 90 1.02E-23 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 5.2E-21 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_0437 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF52172 943 1061 2.56E-34 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF47384 677 757 1.06E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF47226 1210 1273 9.16E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF53850 38 256 2.5E-23 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Pfam PF00512 His Kinase A (phospho-acceptor) domain 693 756 6.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF55874 745 917 1.57E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.40.190.10 273 502 2.7E-49 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.40.50.12740 944 1175 5.2E-37 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SUPERFAMILY SSF53850 275 504 1.37E-33 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SMART SM00388 692 756 1.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SMART SM00448 945 1059 4.0E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:1.10.287.130 668 754 1.3E-17 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 290 502 7.5E-26 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Pfam PF00072 Response regulator receiver domain 947 1058 3.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 858 5.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 862 872 5.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 897 5.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 5.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 806 918 2.8E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.40.190.10 39 254 8.2E-39 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 256 1.2E-14 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SMART SM00062 282 506 1.1E-16 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SMART SM00062 41 258 6.8E-41 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.40.190.10 369 465 2.7E-49 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.40.190.10 125 217 8.2E-39 T 12-10-2018 YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 SMART SM00387 803 919 9.8E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2161 8f0e4ed1811a1e4fa524a708b75df156 1286 Gene3D G3DSA:3.30.565.10 755 923 3.9E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 SUPERFAMILY SSF55031 208 320 7.22E-41 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 Pfam PF01546 Peptidase family M20/M25/M40 139 400 2.2E-14 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 3.0E-154 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 Gene3D G3DSA:3.30.70.360 208 319 2.7E-174 T 12-10-2018 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 Gene3D G3DSA:3.40.630.10 4 400 2.7E-174 T 12-10-2018 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 Pfam PF07687 Peptidase dimerisation domain 206 303 1.6E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.757 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 SUPERFAMILY SSF53187 1 400 2.41E-78 T 12-10-2018 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 PIRSF PIRSF037215 1 408 1.6E-183 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YpsIP31758_1605 f05c284a881a72b32bcfd172b6570f1b 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 Pfam PF12833 Helix-turn-helix domain 178 255 6.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 SMART SM00342 172 254 2.2E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 Gene3D G3DSA:2.60.120.10 9 92 5.5E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 Pfam PF02311 AraC-like ligand binding domain 25 134 8.5E-9 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 SUPERFAMILY SSF51182 16 154 6.52E-15 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 SUPERFAMILY SSF46689 208 256 3.36E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1417 7ebed4e66979b7d3933662f190794482 261 Gene3D G3DSA:1.10.10.60 152 258 1.5E-21 T 12-10-2018 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 SUPERFAMILY SSF47446 298 431 8.5E-46 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:1.10.260.30 328 450 1.3E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:3.40.50.300 90 285 1.3E-124 T 12-10-2018 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.4E-179 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 SMART SM00963 1 86 1.9E-37 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 SUPERFAMILY SSF52540 42 354 3.37E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 SMART SM00962 100 296 6.6E-117 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:1.20.120.140 4 305 1.3E-124 T 12-10-2018 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.7E-75 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Pfam PF02978 Signal peptide binding domain 329 427 1.2E-32 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.7E-23 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.905 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 YpsIP31758_3230 5325e7c52a64d04049c44637bdc10837 453 SMART SM00382 99 247 4.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0899 e924a8e895e12f392da6aab018923666 107 Pfam PF09204 Bacterial self-protective colicin-like immunity 14 100 2.8E-34 T 12-10-2018 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YpsIP31758_0899 e924a8e895e12f392da6aab018923666 107 SUPERFAMILY SSF101125 15 102 3.14E-36 T 12-10-2018 IPR036471 Colicin D superfamily YpsIP31758_0899 e924a8e895e12f392da6aab018923666 107 Gene3D G3DSA:1.20.120.650 13 102 3.6E-20 T 12-10-2018 IPR036471 Colicin D superfamily YpsIP31758_3308 99ef893fbd44f0a2c54fbfe18291b61f 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 1.2E-28 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system YpsIP31758_3308 99ef893fbd44f0a2c54fbfe18291b61f 135 Gene3D G3DSA:1.10.1220.10 100 134 4.0E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_3308 99ef893fbd44f0a2c54fbfe18291b61f 135 Gene3D G3DSA:3.30.160.250 1 86 9.9E-21 T 12-10-2018 YpsIP31758_3308 99ef893fbd44f0a2c54fbfe18291b61f 135 SUPERFAMILY SSF143100 1 61 8.5E-14 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like YpsIP31758_0413 e2b0887e5ba25c7810335f2adef5db76 100 Pfam PF16083 LydA holin phage, holin superfamily III 15 92 1.9E-25 T 12-10-2018 IPR032126 LydA-like holin YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 Gene3D G3DSA:2.30.33.40 1 97 1.0E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 SUPERFAMILY SSF50129 1 96 3.06E-31 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.991 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.7E-30 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 SMART SM00883 2 95 1.1E-48 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_3676 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 24 90 8.5E-17 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 SUPERFAMILY SSF81653 158 269 8.89E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:2.70.150.20 146 233 2.4E-14 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 3.5E-19 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 SMART SM00831 22 95 5.1E-19 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:1.20.1110.10 73 145 1.1E-5 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:1.20.1110.10 683 804 8.7E-9 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:1.20.1110.10 235 381 2.1E-28 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 SUPERFAMILY SSF81665 25 896 4.45E-103 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Pfam PF00122 E1-E2 ATPase 141 349 5.5E-42 T 12-10-2018 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 13 898 0.0 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:3.40.1110.10 382 546 2.0E-52 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 889 1.1E-17 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 SUPERFAMILY SSF56784 367 738 3.79E-34 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 406 1.6E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 728 1.4E-27 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 Gene3D G3DSA:3.40.50.1000 547 682 9.7E-26 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_1633 97cd3cd3a722a7e354089a5107d879b2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 1.3E-88 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 Gene3D G3DSA:3.40.50.720 4 316 1.5E-93 T 12-10-2018 YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 2.5E-20 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 7.3E-131 T 12-10-2018 IPR030827 Inositol 2-dehydrogenase YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 SUPERFAMILY SSF51735 2 143 1.42E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 SUPERFAMILY SSF55347 124 287 1.36E-33 T 12-10-2018 YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 162 234 9.7E-7 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 YpsIP31758_2974 a8a84d0f7a46222f006dfa4f8509985c 328 Gene3D G3DSA:3.30.360.10 138 268 1.5E-93 T 12-10-2018 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 853 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 555 766 4.5E-61 T 12-10-2018 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 552 834 3.23E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 603 751 2.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 217 362 1.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.8.60 769 865 1.4E-6 T 12-10-2018 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 842 1.9E-8 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 763 1.6E-37 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 3.2E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 3.2E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 3.2E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 3.2E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 637 655 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF81923 12 126 1.02E-9 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 180 551 5.89E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 363 550 5.3E-43 T 12-10-2018 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 334 5.2E-8 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 171 361 6.9E-60 T 12-10-2018 YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 SMART SM01086 769 859 2.4E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0322 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.1780.10 5 160 5.4E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 243 377 3.3E-10 T 12-10-2018 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 4.1E-172 T 12-10-2018 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF53955 43 257 6.47E-80 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:1.10.3810.10 48 242 5.8E-80 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 4.5E-31 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 610 4.4E-25 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF56601 211 833 3.5E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF00912 Transglycosylase 55 229 4.7E-65 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 399 614 1.3E-67 T 12-10-2018 YpsIP31758_3972 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 636 836 7.3E-25 T 12-10-2018 YpsIP31758_2988 e09f2bb0afb4a10464720aa49617a6be 373 SMART SM00558 92 215 1.3E-5 T 12-10-2018 IPR003347 JmjC domain YpsIP31758_2988 e09f2bb0afb4a10464720aa49617a6be 373 Gene3D G3DSA:1.10.10.2510 205 372 3.4E-61 T 12-10-2018 YpsIP31758_2988 e09f2bb0afb4a10464720aa49617a6be 373 Gene3D G3DSA:2.60.120.650 2 204 1.8E-80 T 12-10-2018 YpsIP31758_2988 e09f2bb0afb4a10464720aa49617a6be 373 Pfam PF08007 Cupin superfamily protein 10 309 3.5E-102 T 12-10-2018 IPR003347 JmjC domain YpsIP31758_2988 e09f2bb0afb4a10464720aa49617a6be 373 SUPERFAMILY SSF51197 6 292 3.98E-73 T 12-10-2018 YpsIP31758_1361 c8370417cda604aa709d188bb849b7d3 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 1.3E-196 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_1361 c8370417cda604aa709d188bb849b7d3 626 Pfam PF05947 Type VI secretion system, TssF 6 623 1.2E-200 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_1361 c8370417cda604aa709d188bb849b7d3 626 PIRSF PIRSF028304 1 626 3.6E-157 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 Pfam PF09383 NIL domain 268 339 6.6E-18 T 12-10-2018 IPR018449 NIL domain YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 Pfam PF00005 ABC transporter 21 169 4.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 SUPERFAMILY SSF52540 1 240 6.19E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 SMART SM00930 265 340 6.4E-24 T 12-10-2018 IPR018449 NIL domain YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 Gene3D G3DSA:3.40.50.300 1 232 6.1E-78 T 12-10-2018 YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 SUPERFAMILY SSF55021 248 343 1.26E-24 T 12-10-2018 YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 SMART SM00382 30 217 4.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 Gene3D G3DSA:3.30.70.260 233 343 1.2E-36 T 12-10-2018 YpsIP31758_1043 cd4e07122b61efbf9ae8ce99c2bdf282 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.6E-195 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82866 296 497 6.28E-49 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:1.20.1640.10 516 1024 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82714 182 272 2.62E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1440 675 864 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 566 672 3.87E-27 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 136 330 1.78E-25 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82866 807 1031 1.83E-46 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82714 723 810 1.57E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.9E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 SUPERFAMILY SSF82693 39 131 2.35E-27 T 12-10-2018 YpsIP31758_1268 12f254d7b52e8c22143c34275e90ee0a 1043 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 Pfam PF01479 S4 domain 8 52 7.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 Gene3D G3DSA:3.30.70.580 70 229 3.0E-57 T 12-10-2018 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 1.4E-15 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 Gene3D G3DSA:3.10.290.10 1 62 1.3E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 SUPERFAMILY SSF55174 7 62 5.38E-12 T 12-10-2018 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 SMART SM00363 7 63 1.7E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 Gene3D G3DSA:3.30.70.1560 134 207 3.0E-57 T 12-10-2018 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 SUPERFAMILY SSF55120 69 229 2.4E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2990 82df2d2b01f2879f6c2b0b974b4793ca 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.4E-51 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:1.10.150.20 174 253 1.4E-96 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:1.10.150.20 712 855 8.6E-116 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SUPERFAMILY SSF53098 329 521 2.37E-58 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:1.20.1060.10 546 661 3.8E-40 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SMART SM00474 333 520 7.2E-48 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Pfam PF01612 3'-5' exonuclease 333 520 3.4E-44 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.8E-287 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SMART SM00475 7 268 5.1E-140 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SMART SM00482 689 896 1.9E-115 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SUPERFAMILY SSF88723 7 170 2.45E-57 T 12-10-2018 IPR029060 PIN-like domain superfamily YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.5E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SUPERFAMILY SSF47807 171 291 1.26E-31 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:3.30.420.10 329 545 6.7E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Pfam PF00476 DNA polymerase family A 555 929 1.1E-155 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SUPERFAMILY SSF56672 525 932 2.89E-157 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:3.40.50.1010 9 284 1.4E-96 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 2.7E-79 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Gene3D G3DSA:3.30.70.370 667 928 8.6E-116 T 12-10-2018 YpsIP31758_0021 3de42a3a056b0f10b58e6e8fb957335e 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 6.4E-31 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 YpsIP31758_1958 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 3.2E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1958 a0510fcc7e2bcf65ad0ba5773b891e7c 301 SUPERFAMILY SSF161098 99 282 1.96E-23 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1958 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 1.3E-13 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YpsIP31758_1958 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Gene3D G3DSA:1.10.3720.10 99 297 1.3E-16 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.8E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.8E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.8E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.8E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 Gene3D G3DSA:3.40.50.720 2 244 3.7E-61 T 12-10-2018 YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0064 T 12-10-2018 YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 SUPERFAMILY SSF51735 3 254 1.58E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 Pfam PF00106 short chain dehydrogenase 3 191 2.9E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3022 4f97295b59848490394b745bd61fa45d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 Gene3D G3DSA:3.40.50.2300 1 105 2.7E-27 T 12-10-2018 YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 Gene3D G3DSA:1.10.10.10 106 209 6.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 SMART SM00448 1 96 1.7E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 SUPERFAMILY SSF52172 2 162 1.94E-30 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 Pfam PF00486 Transcriptional regulatory protein, C terminal 131 207 6.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 SMART SM00862 131 207 1.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1102 b70e6e99a3c9becba31a0c12ed6bd55c 209 Pfam PF00072 Response regulator receiver domain 4 97 3.2E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0020 763ac468b98a4d2f5c9db4f860b44e84 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_0020 763ac468b98a4d2f5c9db4f860b44e84 207 Pfam PF01323 DSBA-like thioredoxin domain 40 194 1.9E-28 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 YpsIP31758_0020 763ac468b98a4d2f5c9db4f860b44e84 207 Gene3D G3DSA:3.40.30.10 18 207 8.0E-53 T 12-10-2018 YpsIP31758_0020 763ac468b98a4d2f5c9db4f860b44e84 207 SUPERFAMILY SSF52833 20 203 3.18E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0020 763ac468b98a4d2f5c9db4f860b44e84 207 PIRSF PIRSF001488 1 207 1.6E-91 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YpsIP31758_3284 10510bacc155a2995a824af5d06e3acc 319 Gene3D G3DSA:1.10.10.60 3 52 3.0E-20 T 12-10-2018 YpsIP31758_3284 10510bacc155a2995a824af5d06e3acc 319 SUPERFAMILY SSF100950 63 313 1.34E-69 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_3284 10510bacc155a2995a824af5d06e3acc 319 Pfam PF13518 Helix-turn-helix domain 13 49 2.9E-6 T 12-10-2018 YpsIP31758_3284 10510bacc155a2995a824af5d06e3acc 319 Gene3D G3DSA:3.40.50.1360 53 318 9.4E-88 T 12-10-2018 YpsIP31758_3284 10510bacc155a2995a824af5d06e3acc 319 Pfam PF04198 Putative sugar-binding domain 59 313 1.1E-80 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:3.30.70.3070 163 267 2.7E-58 T 12-10-2018 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.58.1830 1 58 2.9E-10 T 12-10-2018 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.1330.10 59 314 2.7E-58 T 12-10-2018 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 SUPERFAMILY SSF64518 1 368 1.44E-106 T 12-10-2018 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.10.8.410 317 369 1.3E-23 T 12-10-2018 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.1E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.6E-32 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 110 133 7.2E-31 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 75 94 7.2E-31 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_2281 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 36 53 7.2E-31 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 4.4E-51 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.8E-126 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.0E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 SUPERFAMILY SSF53613 12 310 2.18E-55 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.6E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 Gene3D G3DSA:3.40.1190.20 2 309 1.5E-109 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 2.2E-63 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 Gene3D G3DSA:3.40.50.620 318 475 5.8E-39 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.224 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YpsIP31758_0564 de2270720e42455c443eddf053f0173c 476 SUPERFAMILY SSF52374 340 470 3.56E-22 T 12-10-2018 YpsIP31758_2108 17457a16d7bcc605bdfd80bd1c578898 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 190 2.8E-21 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_2108 17457a16d7bcc605bdfd80bd1c578898 335 Gene3D G3DSA:3.40.47.10 10 334 3.2E-87 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2108 17457a16d7bcc605bdfd80bd1c578898 335 SUPERFAMILY SSF53901 13 333 1.17E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2108 17457a16d7bcc605bdfd80bd1c578898 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 333 7.2E-24 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 Gene3D G3DSA:3.40.50.300 6 186 2.3E-58 T 12-10-2018 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 Pfam PF00158 Sigma-54 interaction domain 19 183 9.5E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 SUPERFAMILY SSF46689 228 330 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 Gene3D G3DSA:1.10.10.60 271 337 1.9E-8 T 12-10-2018 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 102 117 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 Gene3D G3DSA:1.10.8.60 187 252 6.8E-21 T 12-10-2018 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 SUPERFAMILY SSF52540 26 254 5.45E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 1.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 1.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 Pfam PF02954 Bacterial regulatory protein, Fis family 296 329 3.8E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 SMART SM00382 36 179 9.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0629 6d1c228fe2689797d97b0e123bec98db 342 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 40 53 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.032 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF53623 105 338 1.7E-76 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 4.7E-25 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 6.2E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.40.1390.10 2 104 1.1E-32 T 12-10-2018 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.90.190.20 342 494 4.0E-56 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF63418 5 103 6.02E-24 T 12-10-2018 IPR035911 MurE/MurF, N-terminal YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Gene3D G3DSA:3.40.1190.10 105 341 2.4E-87 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 5.1E-164 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 Pfam PF08245 Mur ligase middle domain 114 318 6.8E-50 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_3392 64a48ad3b808bbf1ce68cf3001fdf304 495 SUPERFAMILY SSF53244 339 491 1.68E-51 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:1.10.260.40 3 58 6.6E-22 T 12-10-2018 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:3.40.50.2300 160 289 3.1E-69 T 12-10-2018 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.4E-33 T 12-10-2018 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 SUPERFAMILY SSF53822 61 331 3.26E-79 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 SUPERFAMILY SSF47413 2 56 5.23E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:3.40.50.2300 63 304 3.1E-69 T 12-10-2018 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.9E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 YpsIP31758_1855 56c015148e9b6013aa89e6db15c8f610 338 SMART SM00354 1 71 1.1E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_B0018 3abd4a01ebaf6566233192f5b95d5d8d 359 Gene3D G3DSA:1.20.81.30 218 324 1.2E-10 T 12-10-2018 YpsIP31758_B0018 3abd4a01ebaf6566233192f5b95d5d8d 359 Pfam PF00482 Type II secretion system (T2SS), protein F 28 143 4.3E-10 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_B0018 3abd4a01ebaf6566233192f5b95d5d8d 359 Pfam PF00482 Type II secretion system (T2SS), protein F 228 347 3.5E-15 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_B0018 3abd4a01ebaf6566233192f5b95d5d8d 359 Gene3D G3DSA:1.20.81.30 14 133 3.9E-25 T 12-10-2018 YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 Gene3D G3DSA:1.10.10.10 141 238 2.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 Gene3D G3DSA:3.40.50.2300 3 139 2.0E-36 T 12-10-2018 YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 6.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 Pfam PF00072 Response regulator receiver domain 14 122 7.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 SMART SM00448 12 122 3.7E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 SUPERFAMILY SSF52172 12 189 3.84E-40 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1210 39364e9324ee858f2e14c4f1e40c8b29 239 SMART SM00862 155 231 6.9E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 Gene3D G3DSA:3.60.15.10 503 740 4.7E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 SUPERFAMILY SSF56281 505 751 1.7E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 Pfam PF13567 Domain of unknown function (DUF4131) 33 162 2.8E-11 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 Pfam PF03772 Competence protein 209 477 5.0E-52 T 12-10-2018 IPR004477 ComEC/Rec2-related protein YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 413 8.1E-38 T 12-10-2018 IPR004477 ComEC/Rec2-related protein YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 SMART SM00849 514 698 6.3E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 Pfam PF00753 Metallo-beta-lactamase superfamily 514 690 1.5E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2578 26d2230a16077cc35ff1536a34dcc982 763 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 72 727 2.4E-182 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 592 8.1E-35 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Gene3D G3DSA:4.10.180.10 297 312 3.8E-24 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 2.5E-64 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Gene3D G3DSA:2.30.110.50 294 370 3.8E-24 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Gene3D G3DSA:2.30.110.50 15 238 1.1E-81 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 2.4E-51 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 SUPERFAMILY SSF69255 382 471 9.68E-26 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Gene3D G3DSA:2.40.50.230 388 471 1.6E-34 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 SUPERFAMILY SSF69279 22 203 4.48E-48 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 SUPERFAMILY SSF69279 204 383 2.38E-50 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 Gene3D G3DSA:3.55.50.10 112 208 1.1E-81 T 12-10-2018 YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 1.3E-73 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_0733 4da4c02e349c86828e483e25cab87d0e 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 8.6E-186 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 Gene3D G3DSA:3.40.50.880 152 379 4.0E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.2E-48 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.5E-52 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 SUPERFAMILY SSF52021 3 143 7.32E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.0E-40 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.0E-40 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.0E-40 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.0E-40 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.0E-40 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 SMART SM01097 3 133 1.2E-90 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 Gene3D G3DSA:3.50.30.20 2 151 2.6E-61 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 5.1E-150 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 SUPERFAMILY SSF52317 153 378 8.87E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.519 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.4E-11 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.4E-11 T 12-10-2018 YpsIP31758_3454 605df4fde42ad7f20931d946c1d1e01f 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.4E-11 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:2.40.50.140 317 390 1.7E-34 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:3.30.470.30 70 253 1.5E-102 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00278 480 499 0.79 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00278 512 531 200.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00278 446 465 17.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00278 544 563 38.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.8E-36 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:1.10.150.20 506 580 1.2E-29 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:3.30.1490.70 78 316 1.5E-102 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 7.8E-138 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:1.10.150.20 432 505 1.9E-30 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:1.10.287.610 1 69 1.3E-30 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.277 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:2.20.70.80 391 431 5.5E-21 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00292 594 669 2.1E-12 T 12-10-2018 IPR001357 BRCT domain YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SUPERFAMILY SSF52113 595 668 9.0E-19 T 12-10-2018 IPR036420 BRCT domain superfamily YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 PIRSF PIRSF001604 1 670 3.6E-261 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 4.2E-13 T 12-10-2018 IPR001357 BRCT domain YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SUPERFAMILY SSF50249 318 400 1.88E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Gene3D G3DSA:3.40.50.10190 581 669 3.1E-26 T 12-10-2018 IPR036420 BRCT domain superfamily YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF14520 Helix-hairpin-helix domain 446 502 3.2E-6 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SMART SM00532 3 448 3.0E-284 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.3E-23 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SUPERFAMILY SSF47781 404 578 1.37E-61 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.4E-10 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 5.9E-273 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 SUPERFAMILY SSF56091 2 316 1.54E-123 T 12-10-2018 YpsIP31758_1321 2a1119f289ab483464b667124eb084bd 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site YpsIP31758_0533 c486b1ab88ade045cb49376ebdee1631 453 SUPERFAMILY SSF56954 16 442 6.54E-73 T 12-10-2018 YpsIP31758_0533 c486b1ab88ade045cb49376ebdee1631 453 Pfam PF02321 Outer membrane efflux protein 252 440 3.7E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_0533 c486b1ab88ade045cb49376ebdee1631 453 Pfam PF02321 Outer membrane efflux protein 32 225 4.2E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_0533 c486b1ab88ade045cb49376ebdee1631 453 Gene3D G3DSA:1.20.1600.10 25 444 2.0E-72 T 12-10-2018 YpsIP31758_0533 c486b1ab88ade045cb49376ebdee1631 453 PIRSF PIRSF001892 1 449 5.4E-162 T 12-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 YpsIP31758_0317 c0036654809e7ba61d0bc7e801153d95 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 329 2.9E-99 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_0317 c0036654809e7ba61d0bc7e801153d95 343 Pfam PF06996 Type VI secretion, TssG 19 329 7.5E-92 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_4147 67f342c3158728750fcc77d9b40179ce 317 Gene3D G3DSA:3.40.50.720 125 297 7.4E-77 T 12-10-2018 YpsIP31758_4147 67f342c3158728750fcc77d9b40179ce 317 Gene3D G3DSA:3.30.1780.10 5 309 7.4E-77 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 YpsIP31758_4147 67f342c3158728750fcc77d9b40179ce 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 15 309 3.7E-62 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 YpsIP31758_4147 67f342c3158728750fcc77d9b40179ce 317 SUPERFAMILY SSF51735 1 307 1.37E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_4147 67f342c3158728750fcc77d9b40179ce 317 PIRSF PIRSF001439 1 310 7.1E-55 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 Gene3D G3DSA:2.40.170.20 185 681 2.3E-58 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 Gene3D G3DSA:2.170.130.10 68 180 1.5E-13 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 SUPERFAMILY SSF56935 60 681 2.12E-85 T 12-10-2018 YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 74 681 1.7E-247 T 12-10-2018 IPR010100 TonB-dependent copper receptor YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 173 3.4E-13 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_3953 d93c2cbd4a31a3263af0ef771d9c4c75 681 Pfam PF00593 TonB dependent receptor 228 680 2.0E-37 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_0352 d07031d8dd32bb650760387c90160c64 193 Pfam PF03358 NADPH-dependent FMN reductase 1 139 4.7E-32 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YpsIP31758_0352 d07031d8dd32bb650760387c90160c64 193 Gene3D G3DSA:3.40.50.360 1 190 6.3E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0352 d07031d8dd32bb650760387c90160c64 193 SUPERFAMILY SSF52218 1 168 6.68E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0352 d07031d8dd32bb650760387c90160c64 193 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 169 3.5E-71 T 12-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 YpsIP31758_2471 873d416aad289cfbd167c68fca48d092 383 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 4.0E-88 T 12-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB YpsIP31758_2471 873d416aad289cfbd167c68fca48d092 383 Gene3D G3DSA:1.20.1250.20 1 380 3.7E-14 T 12-10-2018 YpsIP31758_2471 873d416aad289cfbd167c68fca48d092 383 SUPERFAMILY SSF103473 6 377 1.96E-23 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 327 3.4E-163 T 12-10-2018 IPR014317 Transcription activator PspF YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 310 5.0E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 310 330 5.0E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.10.60 264 330 5.9E-8 T 12-10-2018 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.8.60 180 263 5.0E-27 T 12-10-2018 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 Pfam PF02954 Bacterial regulatory protein, Fis family 290 326 2.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF46689 222 329 1.57E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 SMART SM00382 28 171 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:3.40.50.300 1 179 1.3E-56 T 12-10-2018 YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF52540 8 245 2.3E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1785 416c979727886b6d0da014313ab6a5f6 342 Pfam PF00158 Sigma-54 interaction domain 9 170 5.4E-60 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 698 1.2E-286 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF109604 3 190 2.39E-75 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF02824 TGS domain 388 447 2.2E-20 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:1.10.3210.10 3 190 1.0E-80 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF55021 629 699 4.4E-5 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.4E-35 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00954 235 345 8.8E-62 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81271 375 447 3.92E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13328 HD domain 26 175 4.1E-53 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81301 180 392 4.25E-62 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00471 41 153 1.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13291 ACT domain 622 699 2.0E-15 T 12-10-2018 IPR002912 ACT domain YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.460.10 193 325 5.8E-48 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.70.260 623 702 2.7E-13 T 12-10-2018 YpsIP31758_0039 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.10.20.30 381 455 7.1E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 Gene3D G3DSA:3.40.190.10 49 362 5.8E-99 T 12-10-2018 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 Pfam PF13416 Bacterial extracellular solute-binding protein 46 348 1.1E-52 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 PRINTS PR00181 Maltose binding protein signature 69 87 2.0E-8 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 PRINTS PR00181 Maltose binding protein signature 129 148 2.0E-8 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 PRINTS PR00181 Maltose binding protein signature 150 169 2.0E-8 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 PRINTS PR00181 Maltose binding protein signature 362 381 2.0E-8 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 Gene3D G3DSA:3.40.190.10 138 395 5.8E-99 T 12-10-2018 YpsIP31758_0914 2482ad91755cae54f538e9fe7ac5ec2c 411 SUPERFAMILY SSF53850 31 400 9.51E-80 T 12-10-2018 YpsIP31758_1203 0b5c736330198bcf69666b5ab182f146 266 SUPERFAMILY SSF53613 5 266 3.12E-77 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_1203 0b5c736330198bcf69666b5ab182f146 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 1.1E-91 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 YpsIP31758_1203 0b5c736330198bcf69666b5ab182f146 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 8.4E-100 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_1203 0b5c736330198bcf69666b5ab182f146 266 Gene3D G3DSA:3.40.1190.20 1 266 3.6E-98 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.2E-249 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 SUPERFAMILY SSF56059 83 347 2.69E-69 T 12-10-2018 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Gene3D G3DSA:3.30.1490.20 131 203 1.5E-157 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 8.1E-85 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 SMART SM00878 336 441 3.2E-65 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Gene3D G3DSA:3.40.50.20 1 85 5.2E-34 T 12-10-2018 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 Gene3D G3DSA:3.30.470.20 86 433 1.5E-157 T 12-10-2018 YpsIP31758_0391 d9300bff9c88290022c29c69c37fc442 449 SUPERFAMILY SSF52440 1 113 3.74E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 791 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.1490.20 8 198 4.7E-70 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF52009 351 469 7.98E-36 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF51621 470 792 3.4E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.470.20 199 360 1.8E-59 T 12-10-2018 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 4.2E-117 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 7.1E-27 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 790 3.8E-60 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF56059 10 387 2.94E-106 T 12-10-2018 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.20.20.60 481 793 3.6E-100 T 12-10-2018 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 PIRSF PIRSF000854 6 794 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 YpsIP31758_1737 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.50.30.10 364 480 4.4E-41 T 12-10-2018 YpsIP31758_0076 a5d67ba558b6fe71fbcd47adfa83b37c 144 SMART SM00450 41 139 2.0E-18 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_0076 a5d67ba558b6fe71fbcd47adfa83b37c 144 Gene3D G3DSA:3.40.250.10 23 142 1.4E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_0076 a5d67ba558b6fe71fbcd47adfa83b37c 144 SUPERFAMILY SSF52821 17 143 1.7E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_0076 a5d67ba558b6fe71fbcd47adfa83b37c 144 Pfam PF00581 Rhodanese-like domain 44 134 1.1E-16 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 PIRSF PIRSF002599 1 70 1.8E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.5E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 SUPERFAMILY SSF50249 3 69 8.74E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 7 22 1.8E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 43 61 1.8E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 28 37 1.8E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 SMART SM00357 6 70 5.6E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_0374 3a9072204569ef1d2b1f271c44259db4 70 Gene3D G3DSA:2.40.50.140 2 69 4.1E-29 T 12-10-2018 YpsIP31758_3122 a57d62d0e9976f699869817f934c0cc6 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 1.7E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC YpsIP31758_3122 a57d62d0e9976f699869817f934c0cc6 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 1.7E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC YpsIP31758_3122 a57d62d0e9976f699869817f934c0cc6 111 Pfam PF02699 Preprotein translocase subunit 24 100 1.8E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC YpsIP31758_3122 a57d62d0e9976f699869817f934c0cc6 111 SMART SM01323 20 103 1.7E-37 T 12-10-2018 IPR003849 Preprotein translocase YajC YpsIP31758_3122 a57d62d0e9976f699869817f934c0cc6 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 2.3E-32 T 12-10-2018 IPR003849 Preprotein translocase YajC YpsIP31758_0245 28a21f8131b1ee37012722f45a602b81 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.3E-63 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 Pfam PF00155 Aminotransferase class I and II 27 392 4.5E-78 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 Gene3D G3DSA:3.90.1150.10 11 391 1.2E-154 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 SUPERFAMILY SSF53383 1 389 6.99E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 Gene3D G3DSA:3.40.640.10 60 301 1.2E-154 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.7E-36 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.7E-36 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.7E-36 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_3763 35f2c01214c341de7cfebce12d745a6a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.7E-36 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_1502 d4b46519e36477c1adfa6c347add5eca 312 Gene3D G3DSA:1.20.1510.10 19 223 7.1E-24 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_1502 d4b46519e36477c1adfa6c347add5eca 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 288 4.3E-24 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_1502 d4b46519e36477c1adfa6c347add5eca 312 Pfam PF01545 Cation efflux family 22 221 2.2E-33 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_1502 d4b46519e36477c1adfa6c347add5eca 312 SUPERFAMILY SSF161111 16 223 1.57E-34 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_2706 5968c3959430720421e287e5f1ca4158 233 Gene3D G3DSA:1.20.144.10 124 227 1.7E-8 T 12-10-2018 YpsIP31758_2706 5968c3959430720421e287e5f1ca4158 233 SMART SM00014 95 210 2.2E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_2706 5968c3959430720421e287e5f1ca4158 233 Pfam PF01569 PAP2 superfamily 97 202 1.2E-7 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_2706 5968c3959430720421e287e5f1ca4158 233 SUPERFAMILY SSF48317 26 222 1.44E-17 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YpsIP31758_2706 5968c3959430720421e287e5f1ca4158 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.022 T 12-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 45.273 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 Pfam PF13847 Methyltransferase domain 111 247 1.2E-21 T 12-10-2018 IPR025714 Methyltransferase domain YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 Gene3D G3DSA:1.10.8.10 1 84 1.7E-22 T 12-10-2018 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 1.7E-87 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 7.3E-88 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 Gene3D G3DSA:3.40.50.150 87 275 3.6E-60 T 12-10-2018 YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 SUPERFAMILY SSF53335 3 272 5.48E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2065 4588d7c53c8c64a6198cec7b99a0a37d 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_0904 2413967b98100f874de3237a587e8924 106 Gene3D G3DSA:1.10.225.20 2 96 9.4E-30 T 12-10-2018 YpsIP31758_0904 2413967b98100f874de3237a587e8924 106 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 1.3E-34 T 12-10-2018 IPR024476 Protein of unknown function DUF3861 YpsIP31758_3499 75e979f65ff827c0aa54a5c92a7b709a 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 7.6E-23 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 YpsIP31758_3499 75e979f65ff827c0aa54a5c92a7b709a 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 420 8.0E-154 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 YpsIP31758_3499 75e979f65ff827c0aa54a5c92a7b709a 423 Pfam PF07670 Nucleoside recognition 97 193 4.5E-9 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YpsIP31758_3499 75e979f65ff827c0aa54a5c92a7b709a 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 420 1.4E-75 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 YpsIP31758_1073 578681d76e08ed7b6d926caf2ddf2a55 268 Gene3D G3DSA:1.10.3720.10 60 262 1.4E-19 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1073 578681d76e08ed7b6d926caf2ddf2a55 268 SUPERFAMILY SSF161098 65 256 4.97E-24 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1073 578681d76e08ed7b6d926caf2ddf2a55 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 261 1.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Pfam PF01380 SIS domain 127 208 2.9E-9 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:1.10.8.1080 219 295 1.2E-30 T 12-10-2018 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.497 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF53697 4 249 5.12E-75 T 12-10-2018 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 3.0E-129 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:3.40.50.10490 1 218 1.6E-84 T 12-10-2018 YpsIP31758_1143 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF46934 239 277 5.19E-5 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 1.8E-46 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52518 5 330 6.7E-121 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52922 533 664 8.25E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.4E-170 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.920 538 664 4.4E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 SUPERFAMILY SSF52518 334 526 1.36E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Pfam PF02780 Transketolase, C-terminal domain 540 655 5.9E-20 T 12-10-2018 IPR033248 Transketolase, C-terminal domain YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 SMART SM00861 355 525 1.5E-68 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.970 1 326 4.0E-136 T 12-10-2018 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 Gene3D G3DSA:3.40.50.970 327 537 6.9E-85 T 12-10-2018 YpsIP31758_0847 c5b9054de5cd877e039a904884343b6b 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 YpsIP31758_3445 723851f32c8dfcf1611ed30fd7f2aec6 125 SUPERFAMILY SSF110069 5 125 1.83E-46 T 12-10-2018 IPR036767 ApaG domain superfamily YpsIP31758_3445 723851f32c8dfcf1611ed30fd7f2aec6 125 Gene3D G3DSA:2.60.40.1470 1 125 6.4E-45 T 12-10-2018 IPR036767 ApaG domain superfamily YpsIP31758_3445 723851f32c8dfcf1611ed30fd7f2aec6 125 Pfam PF04379 ApaG domain 18 102 7.8E-33 T 12-10-2018 IPR007474 ApaG domain YpsIP31758_3445 723851f32c8dfcf1611ed30fd7f2aec6 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.51 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 2.3E-45 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 25.19 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 9.7E-176 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 2.8E-105 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.874 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Gene3D G3DSA:3.30.460.80 6 156 1.3E-35 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 3.8E-42 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Gene3D G3DSA:1.10.645.20 213 598 6.2E-143 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.302 T 12-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF143243 24 228 1.57E-60 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1456 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF56762 224 598 2.49E-121 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 10 495 58.102 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 Gene3D G3DSA:3.40.605.10 16 458 7.8E-142 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 SUPERFAMILY SSF53720 10 464 1.57E-120 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 Pfam PF00171 Aldehyde dehydrogenase family 23 467 3.9E-119 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 Gene3D G3DSA:3.40.309.10 256 446 7.8E-142 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_2119 219844b9e9e870a23f3a0401f984b994 500 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 12 495 6.2E-263 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Gene3D G3DSA:3.10.20.410 22 142 4.7E-24 T 12-10-2018 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 SUPERFAMILY SSF141729 22 142 1.28E-26 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Pfam PF00577 Outer membrane usher protein 183 753 1.2E-142 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Gene3D G3DSA:2.60.40.3110 253 342 1.4E-36 T 12-10-2018 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Gene3D G3DSA:2.60.40.2070 759 852 8.5E-15 T 12-10-2018 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Gene3D G3DSA:2.60.40.2610 668 758 5.7E-29 T 12-10-2018 YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Pfam PF13953 PapC C-terminal domain 762 833 1.3E-20 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_2165 459db9949674ffbbea5b1f7652dcfca5 854 Pfam PF13954 PapC N-terminal domain 25 164 7.5E-35 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Gene3D G3DSA:3.30.1850.10 1 122 2.5E-50 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 SUPERFAMILY SSF102405 120 330 4.88E-42 T 12-10-2018 YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF03641 Possible lysine decarboxylase 190 329 8.1E-33 T 12-10-2018 IPR031100 LOG family YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 2.3E-45 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 4.4E-58 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 YpsIP31758_1003 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Gene3D G3DSA:3.40.50.450 124 452 4.3E-123 T 12-10-2018 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Pfam PF01584 CheW-like domain 574 700 1.4E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:2.40.50.180 592 656 6.4E-38 T 12-10-2018 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SUPERFAMILY SSF55052 176 239 2.59E-19 T 12-10-2018 IPR035891 CheY-binding domain of CheA YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:2.30.30.40 569 697 6.4E-38 T 12-10-2018 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SUPERFAMILY SSF50341 568 700 9.68E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SMART SM00387 429 569 8.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:1.20.120.160 1 147 1.6E-43 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SUPERFAMILY SSF55874 387 567 4.58E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SMART SM01231 321 384 2.6E-20 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:1.10.287.560 321 384 2.3E-16 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 2.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 2.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 2.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 523 2.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:3.30.565.10 385 568 2.0E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SUPERFAMILY SSF47384 322 385 4.32E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Pfam PF01627 Hpt domain 9 104 2.2E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 568 3.1E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 322 384 1.8E-16 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SMART SM00073 5 102 2.7E-29 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SMART SM00260 561 701 8.8E-42 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Pfam PF09078 CheY binding 177 239 1.0E-23 T 12-10-2018 IPR015162 CheY binding YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 SUPERFAMILY SSF47226 7 126 1.7E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_1638 75edaffda6e50ad48b79a2bc2d4eddde 717 Gene3D G3DSA:3.30.70.400 171 242 6.4E-26 T 12-10-2018 IPR035891 CheY-binding domain of CheA YpsIP31758_0357 650a3e570273f184d549541fb9ce372d 85 Gene3D G3DSA:1.10.1220.10 4 79 4.6E-5 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_0357 650a3e570273f184d549541fb9ce372d 85 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 83 5.3E-14 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ YpsIP31758_0357 650a3e570273f184d549541fb9ce372d 85 Pfam PF04221 RelB antitoxin 5 75 5.6E-13 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ YpsIP31758_0357 650a3e570273f184d549541fb9ce372d 85 PIRSF PIRSF003108 1 85 3.5E-19 T 12-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 5.4E-121 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 3.7E-103 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 Gene3D G3DSA:3.40.50.10800 200 295 1.5E-94 T 12-10-2018 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 Gene3D G3DSA:3.40.50.10800 115 340 1.5E-94 T 12-10-2018 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 Gene3D G3DSA:3.40.50.10800 31 322 1.5E-94 T 12-10-2018 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.082 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YpsIP31758_2865 7b9a535719b03cc0b8e0b085c2314add 353 SUPERFAMILY SSF142754 29 341 1.96E-106 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YpsIP31758_1636 6c5cbd043400e9ed37296899af286812 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site YpsIP31758_1636 6c5cbd043400e9ed37296899af286812 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 2.9E-11 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YpsIP31758_1636 6c5cbd043400e9ed37296899af286812 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 2.8E-119 T 12-10-2018 IPR022522 Flagellar motor stator, MotA YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:1.10.10.10 1 86 1.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 167 267 1.1E-99 T 12-10-2018 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF53850 91 322 2.27E-43 T 12-10-2018 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 Pfam PF03466 LysR substrate binding domain 92 288 1.7E-40 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1922 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 92 303 1.1E-99 T 12-10-2018 YpsIP31758_3505 8c7b3332eb91e56a2a436faef2c2c78a 147 Gene3D G3DSA:3.40.630.30 1 147 3.9E-47 T 12-10-2018 YpsIP31758_3505 8c7b3332eb91e56a2a436faef2c2c78a 147 SUPERFAMILY SSF55729 3 145 2.74E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3505 8c7b3332eb91e56a2a436faef2c2c78a 147 Pfam PF00583 Acetyltransferase (GNAT) family 15 120 1.5E-17 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_3505 8c7b3332eb91e56a2a436faef2c2c78a 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 1.4E-44 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 SUPERFAMILY SSF117143 92 222 4.45E-37 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 4.8E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.6E-109 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 1.4E-34 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_0644 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 9.7E-43 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF56801 2668 3224 6.67E-124 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 117 354 1.5E-58 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF52777 987 1226 1.67E-39 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 267 283 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF47336 29 131 1.7E-12 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF53901 113 469 2.56E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.40.50.980 2858 3010 6.3E-23 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2165 2180 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1412 1423 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SMART SM00823 Phosphopantetheine attachment site 33 102 5.6E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SMART SM00823 Phosphopantetheine attachment site 2142 2210 0.34 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SMART SM00823 Phosphopantetheine attachment site 3211 3280 0.025 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 362 470 1.2E-30 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.559.10 2222 2422 3.6E-50 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.559.10 805 982 5.4E-35 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:2.30.38.10 3014 3091 1.6E-19 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.40.50.980 2725 2852 4.7E-26 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:1.10.1200.10 3195 3288 3.0E-17 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:1.10.1200.10 2125 2212 4.3E-13 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00501 AMP-binding enzyme 1264 1668 1.6E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00501 AMP-binding enzyme 2706 3100 3.1E-88 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF47336 2138 2206 5.23E-10 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF52777 2279 2422 1.33E-23 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00668 Condensation domain 2284 2662 1.3E-34 T 12-10-2018 IPR001242 Condensation domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00668 Condensation domain 811 1228 1.1E-25 T 12-10-2018 IPR001242 Condensation domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.559.30 2425 2718 5.4E-84 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.559.30 986 1237 6.7E-77 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.70.3290 557 689 1.2E-12 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:1.10.1200.10 705 780 3.6E-13 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.300.30 2046 2121 4.3E-13 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1285 1693 6.9E-116 T 12-10-2018 IPR010071 Amino acid adenylation domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2724 3125 3.9E-110 T 12-10-2018 IPR010071 Amino acid adenylation domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF47336 711 783 4.97E-8 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.40.50.12780 1257 1661 3.8E-102 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF52777 812 982 1.33E-18 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2838 2849 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF56801 1249 2154 7.98E-124 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.300.30 3096 3194 4.6E-20 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.30.300.30 1663 1746 6.8E-8 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.40.47.10 109 554 1.6E-131 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF52777 2427 2668 2.78E-44 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:3.40.50.150 1775 2045 3.0E-11 T 12-10-2018 YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SMART SM00825 Beta-ketoacyl synthase 119 525 1.1E-112 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Gene3D G3DSA:1.10.1200.10 29 108 1.2E-11 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00550 Phosphopantetheine attachment site 38 95 2.4E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00550 Phosphopantetheine attachment site 2145 2204 8.7E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00550 Phosphopantetheine attachment site 3212 3273 1.2E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 Pfam PF00550 Phosphopantetheine attachment site 713 776 6.9E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_0683 6d2edf969500fd51721a75d6491251e7 3293 SUPERFAMILY SSF47336 3205 3273 6.02E-15 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 7.9E-119 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.4E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.4E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.4E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.4E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 Gene3D G3DSA:3.20.20.70 1 293 1.5E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 SUPERFAMILY SSF51569 2 291 1.36E-98 T 12-10-2018 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.855 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 SMART SM01130 1 291 5.2E-144 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 PIRSF PIRSF001365 1 293 2.1E-94 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1247 9206989b2eb5d44e71f6809b068b5cce 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 1.1E-113 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 122 3.8E-39 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 SUPERFAMILY SSF81343 2 125 1.5E-33 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 PIRSF PIRSF000178 1 125 2.2E-32 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 Gene3D G3DSA:1.20.1300.10 1 125 4.6E-46 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2885 eb85b35641de8c098651bd2af0bc1bc6 125 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 4.0E-29 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3134 0c5da0c801601cc733a10c4395dece9f 348 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 48 332 1.2E-68 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 YpsIP31758_3134 0c5da0c801601cc733a10c4395dece9f 348 Pfam PF12849 PBP superfamily domain 61 313 8.4E-30 T 12-10-2018 IPR024370 PBP domain YpsIP31758_3134 0c5da0c801601cc733a10c4395dece9f 348 Gene3D G3DSA:3.40.190.10 148 290 8.0E-105 T 12-10-2018 YpsIP31758_3134 0c5da0c801601cc733a10c4395dece9f 348 SUPERFAMILY SSF53850 64 345 1.61E-66 T 12-10-2018 YpsIP31758_3134 0c5da0c801601cc733a10c4395dece9f 348 Gene3D G3DSA:3.40.190.10 63 334 8.0E-105 T 12-10-2018 YpsIP31758_2756 9c549b41dfa07e8a74d767764b107af3 508 Pfam PF13347 MFS/sugar transport protein 13 444 1.2E-48 T 12-10-2018 YpsIP31758_2756 9c549b41dfa07e8a74d767764b107af3 508 Gene3D G3DSA:1.20.1250.20 3 440 9.6E-15 T 12-10-2018 YpsIP31758_2756 9c549b41dfa07e8a74d767764b107af3 508 SUPERFAMILY SSF103473 8 442 3.4E-30 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.1E-44 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:2.60.15.10 4 91 2.7E-31 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.6E-12 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.0 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF46604 90 138 1.83E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4175 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:1.20.5.440 92 135 4.3E-19 T 12-10-2018 YpsIP31758_4140 1dd3b49b4c1f1d3ccd7c1834295f39d2 421 SUPERFAMILY SSF53383 62 410 3.44E-60 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_4140 1dd3b49b4c1f1d3ccd7c1834295f39d2 421 Pfam PF00155 Aminotransferase class I and II 68 391 3.8E-22 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_4140 1dd3b49b4c1f1d3ccd7c1834295f39d2 421 Gene3D G3DSA:3.40.640.10 1 415 1.8E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 51.91 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 SUPERFAMILY SSF51905 1 418 8.4E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 2.8E-181 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 Gene3D G3DSA:3.50.50.60 1 107 1.4E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 Pfam PF00890 FAD binding domain 4 404 4.8E-62 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_0228 5f0801ca961b230f2edaeeeec9b9b3dc 424 PIRSF PIRSF000141 1 423 1.3E-174 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 143 4.8E-41 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49584 137 237 8.11E-14 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49354 17 143 2.12E-38 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 236 1.8E-14 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.10 148 245 1.2E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.10 22 144 1.8E-40 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 21 30 3.7E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 70 91 3.7E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 98 115 3.7E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 164 179 3.7E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2167 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 125 140 3.7E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.9E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.6E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.6E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 SUPERFAMILY SSF46785 5 60 2.6E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 SMART SM00420 6 58 7.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 SUPERFAMILY SSF100950 93 249 1.99E-29 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 SMART SM01134 90 250 3.0E-63 T 12-10-2018 YpsIP31758_3264 81610202801b8cee76855ec06eb6b8a6 269 Pfam PF00455 DeoR C terminal sensor domain 92 248 1.5E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_2725 b4ba961c23ecb557d61614e20137cee1 382 Pfam PF12639 DNase/tRNase domain of colicin-like bacteriocin 278 349 1.3E-6 T 12-10-2018 YpsIP31758_2725 b4ba961c23ecb557d61614e20137cee1 382 SUPERFAMILY SSF54060 245 348 3.06E-24 T 12-10-2018 YpsIP31758_2725 b4ba961c23ecb557d61614e20137cee1 382 PIRSF PIRSF011452 1 382 9.6E-223 T 12-10-2018 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YpsIP31758_2148 d49a2cb497d7bb4d844f54051d10b9a3 386 Pfam PF00155 Aminotransferase class I and II 55 375 8.7E-31 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_2148 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.40.640.10 63 276 6.9E-107 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2148 d49a2cb497d7bb4d844f54051d10b9a3 386 SUPERFAMILY SSF53383 7 385 3.98E-84 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2148 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.90.1150.10 22 379 6.9E-107 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 140 9.2E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 SUPERFAMILY SSF56935 25 724 5.13E-92 T 12-10-2018 YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 Gene3D G3DSA:2.40.170.20 151 726 2.7E-57 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 726 1.6E-128 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 Pfam PF00593 TonB dependent receptor 233 723 3.7E-33 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 Gene3D G3DSA:2.170.130.10 24 146 3.8E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_0710 754c62554d940b1aa79d11fc33ca9d47 726 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 709 726 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site YpsIP31758_1750 cc5aa6b4985359b21f7a68de6a7c6c3e 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.081 T 12-10-2018 IPR022913 Multidrug resistance protein MdtK YpsIP31758_1750 cc5aa6b4985359b21f7a68de6a7c6c3e 457 Pfam PF01554 MatE 17 177 1.6E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_1750 cc5aa6b4985359b21f7a68de6a7c6c3e 457 Pfam PF01554 MatE 244 405 2.0E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_1750 cc5aa6b4985359b21f7a68de6a7c6c3e 457 PIRSF PIRSF006603 5 455 1.0E-62 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_1750 cc5aa6b4985359b21f7a68de6a7c6c3e 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 9.5E-120 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 4.8E-144 T 12-10-2018 IPR005215 Trigger factor GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.30.70.1050 1 115 1.9E-43 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 230 6.0E-14 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:1.10.3120.10 116 417 1.2E-111 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF109998 248 429 4.32E-48 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 PIRSF PIRSF003095 1 434 3.7E-130 T 12-10-2018 IPR005215 Trigger factor GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF102735 1 131 1.7E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.948 T 12-10-2018 IPR005215 Trigger factor GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.3E-44 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.10.50.40 150 246 1.2E-111 T 12-10-2018 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.1E-40 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YpsIP31758_3093 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF54534 96 240 9.82E-37 T 12-10-2018 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 Pfam PF07690 Major Facilitator Superfamily 10 351 8.9E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 374 3.8E-74 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 Gene3D G3DSA:1.20.1720.10 4 383 4.6E-92 T 12-10-2018 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_1996 4ba0ec75140ac80afc8c3337335959db 397 SUPERFAMILY SSF103473 4 384 1.44E-60 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0877 8f1fd01e728800170ebe93fcf70c3343 485 PIRSF PIRSF004548 1 458 4.7E-194 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD YpsIP31758_0877 8f1fd01e728800170ebe93fcf70c3343 485 Pfam PF06123 Inner membrane protein CreD 6 428 2.1E-149 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF00672 HAMP domain 218 264 1.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 SUPERFAMILY SSF47170 25 182 4.71E-50 T 12-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 Gene3D G3DSA:1.10.287.950 216 518 1.6E-98 T 12-10-2018 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 12-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.4E-89 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00283 269 516 4.8E-95 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.1E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00304 216 268 1.0E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 SUPERFAMILY SSF58104 236 522 1.57E-76 T 12-10-2018 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 SMART SM00319 44 182 4.2E-39 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 Gene3D G3DSA:1.20.120.30 22 193 9.8E-60 T 12-10-2018 YpsIP31758_1642 3fbaab0e55771a58f8e5c055be7b75c9 557 Pfam PF02203 Tar ligand binding domain homologue 1 175 2.8E-52 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_3973 5937ed14835c5ee182f1e8e0895a523b 181 Gene3D G3DSA:3.90.79.10 7 181 6.0E-43 T 12-10-2018 YpsIP31758_3973 5937ed14835c5ee182f1e8e0895a523b 181 Pfam PF00293 NUDIX domain 46 139 1.1E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_3973 5937ed14835c5ee182f1e8e0895a523b 181 SUPERFAMILY SSF55811 3 179 9.88E-37 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_3973 5937ed14835c5ee182f1e8e0895a523b 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Gene3D G3DSA:2.60.40.2070 783 870 1.4E-12 T 12-10-2018 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF13953 PapC C-terminal domain 788 849 5.8E-18 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 SUPERFAMILY SSF141729 63 181 4.84E-30 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Gene3D G3DSA:2.60.40.2610 690 780 8.9E-30 T 12-10-2018 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF00577 Outer membrane usher protein 206 775 4.5E-167 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 317 327 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Gene3D G3DSA:2.60.40.3110 275 364 8.2E-38 T 12-10-2018 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Pfam PF13954 PapC N-terminal domain 45 189 3.7E-38 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_1677 7cae1b7110259b040c1edf0d3a493831 870 Gene3D G3DSA:3.10.20.410 44 167 2.5E-26 T 12-10-2018 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.40.1190.10 86 317 1.6E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 397 1.8E-13 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.40.1390.10 1 85 2.5E-25 T 12-10-2018 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF08245 Mur ligase middle domain 111 299 3.9E-48 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Pfam PF01225 Mur ligase family, catalytic domain 28 96 9.4E-13 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF63418 1 102 1.24E-27 T 12-10-2018 IPR035911 MurE/MurF, N-terminal YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF53244 319 452 2.52E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 SUPERFAMILY SSF53623 105 316 3.92E-58 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Gene3D G3DSA:3.90.190.20 318 458 3.2E-45 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 34.192 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3391 9cc6f404b21a13c3db603d25a6f66007 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 452 1.6E-139 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_0265 da2393b5efe7c860d69c56894b5236b5 290 SUPERFAMILY SSF53474 45 278 5.12E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0265 da2393b5efe7c860d69c56894b5236b5 290 Gene3D G3DSA:3.40.50.1820 40 278 6.1E-75 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0265 da2393b5efe7c860d69c56894b5236b5 290 Pfam PF01738 Dienelactone hydrolase family 56 278 1.2E-75 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF55957 357 445 7.19E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-194 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 4.9E-32 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 3 154 8.1E-49 T 12-10-2018 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.3E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.3E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.3E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 258 365 7.06E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 156 256 2.59E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 257 339 2.6E-64 T 12-10-2018 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.9E-14 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.355 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 9.1E-46 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 175 362 2.6E-64 T 12-10-2018 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.30.310.50 370 446 2.6E-24 T 12-10-2018 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 2 181 1.02E-49 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3600 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 4.9E-20 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 Gene3D G3DSA:3.10.20.30 1 111 4.8E-37 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.2E-62 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 3.6E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 SUPERFAMILY SSF54292 4 109 7.27E-35 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 YpsIP31758_1173 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 YpsIP31758_3542 80832d8c5fe80fbfa6f86f99a27e29c2 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.3E-75 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 YpsIP31758_3542 80832d8c5fe80fbfa6f86f99a27e29c2 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.0E-115 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 YpsIP31758_A0030 cc27d56a92157db0d3bc285b2b1f69f8 242 Gene3D G3DSA:3.40.50.300 1 119 7.9E-9 T 12-10-2018 YpsIP31758_A0030 cc27d56a92157db0d3bc285b2b1f69f8 242 SUPERFAMILY SSF52540 2 108 9.98E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0030 cc27d56a92157db0d3bc285b2b1f69f8 242 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 134 3.1E-6 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 Gene3D G3DSA:2.40.10.240 64 163 8.2E-117 T 12-10-2018 YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 3.2E-159 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.911 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 1.6E-131 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 Gene3D G3DSA:3.40.1780.10 14 343 8.2E-117 T 12-10-2018 YpsIP31758_3124 de22edaa55a66bfef1c34d4a262ecb0d 356 SUPERFAMILY SSF111337 1 343 2.62E-137 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 1.2E-9 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 Gene3D G3DSA:1.10.10.10 5 83 7.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 SUPERFAMILY SSF46689 9 85 4.84E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 Gene3D G3DSA:3.40.50.10490 109 283 1.0E-32 T 12-10-2018 YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 SUPERFAMILY SSF53697 109 278 1.31E-26 T 12-10-2018 YpsIP31758_2978 bd1cb223244537221c8ad06aea3ab60a 284 Pfam PF01380 SIS domain 140 266 4.6E-21 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 Gene3D G3DSA:1.20.1260.30 1 179 1.5E-51 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 Pfam PF02384 N-6 DNA Methylase 162 477 1.5E-99 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 Gene3D G3DSA:3.40.50.150 183 474 1.2E-82 T 12-10-2018 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 7.6E-20 T 12-10-2018 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 7.6E-20 T 12-10-2018 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 7.6E-20 T 12-10-2018 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 7.6E-20 T 12-10-2018 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 SUPERFAMILY SSF53335 4 525 1.89E-126 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 Pfam PF12161 HsdM N-terminal domain 6 150 2.1E-15 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 4 486 1.1E-100 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 YpsIP31758_3536 783a8457a695694e85bf250eb57116d0 863 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 278 2.6E-15 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF51735 91 257 3.78E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 92 257 1.1E-112 T 12-10-2018 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.78 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF52283 5 129 2.34E-16 T 12-10-2018 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 5.2E-29 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 1.2E-31 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.30.1370.170 293 374 6.6E-32 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 YpsIP31758_1418 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 3 277 1.1E-112 T 12-10-2018 YpsIP31758_3126 384323a82ef4ea13f5ec605410948793 200 SUPERFAMILY SSF52833 1 194 3.69E-65 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3126 384323a82ef4ea13f5ec605410948793 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.4E-11 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_3126 384323a82ef4ea13f5ec605410948793 200 Gene3D G3DSA:3.40.30.10 1 197 3.7E-72 T 12-10-2018 YpsIP31758_3126 384323a82ef4ea13f5ec605410948793 200 PIRSF PIRSF000239 1 199 7.4E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_3126 384323a82ef4ea13f5ec605410948793 200 Pfam PF00578 AhpC/TSA family 5 139 1.8E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 Gene3D G3DSA:2.40.170.20 192 830 8.6E-142 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 54 830 1.1E-166 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 Gene3D G3DSA:2.170.130.10 64 191 8.6E-46 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 SUPERFAMILY SSF56935 67 830 1.62E-84 T 12-10-2018 YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 830 2.7E-120 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 5.5E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0130 7e40f2e6053348c2f63d06a98dd6b05d 830 Pfam PF00593 TonB dependent receptor 323 829 1.8E-36 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_1917 b98a7320123d0cbd989c531f2837260f 253 SUPERFAMILY SSF48317 11 237 3.14E-32 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YpsIP31758_1917 b98a7320123d0cbd989c531f2837260f 253 SMART SM00014 77 227 6.3E-36 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_1917 b98a7320123d0cbd989c531f2837260f 253 Pfam PF01569 PAP2 superfamily 80 228 5.0E-28 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_1917 b98a7320123d0cbd989c531f2837260f 253 Gene3D G3DSA:1.20.144.10 2 253 2.0E-77 T 12-10-2018 YpsIP31758_2359 c04aecd7c3b44cee5431b40451fcaf2c 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 8.9E-61 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YpsIP31758_2359 c04aecd7c3b44cee5431b40451fcaf2c 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 6.5E-137 T 12-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 YpsIP31758_2359 c04aecd7c3b44cee5431b40451fcaf2c 268 Gene3D G3DSA:3.20.20.60 3 258 7.9E-93 T 12-10-2018 YpsIP31758_2359 c04aecd7c3b44cee5431b40451fcaf2c 268 SUPERFAMILY SSF51621 2 253 2.72E-82 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 5.7E-177 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 PIRSF PIRSF004532 1 332 4.0E-139 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 Gene3D G3DSA:3.40.190.90 110 277 1.1E-128 T 12-10-2018 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 2.4E-131 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 Gene3D G3DSA:3.30.540.10 7 320 1.1E-128 T 12-10-2018 YpsIP31758_0100 c841e9f81c51fa924a0b824a8e2b65d4 336 SUPERFAMILY SSF56655 1 325 3.54E-108 T 12-10-2018 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.10.580.10 295 395 1.7E-9 T 12-10-2018 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00571 CBS domain 346 393 5.1E-5 T 12-10-2018 IPR000644 CBS domain YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.8E-172 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF52540 43 272 4.99E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00005 ABC transporter 45 192 9.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF54631 276 396 6.19E-13 T 12-10-2018 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.40.50.300 33 291 7.4E-78 T 12-10-2018 YpsIP31758_1061 1cb645ee0a8811482ca3ade6c47ac6a5 399 SMART SM00382 53 242 1.1E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2381 b0a5d474077e23f905507b5ccf2b4c67 457 PIRSF PIRSF006060 1 449 2.4E-77 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2381 b0a5d474077e23f905507b5ccf2b4c67 457 Pfam PF00324 Amino acid permease 18 445 4.2E-118 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_2381 b0a5d474077e23f905507b5ccf2b4c67 457 Gene3D G3DSA:1.20.1740.10 10 456 9.2E-59 T 12-10-2018 YpsIP31758_2381 b0a5d474077e23f905507b5ccf2b4c67 457 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_2107 6ff9b974b039f624979009bded4dfd59 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 4.0E-33 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_2107 6ff9b974b039f624979009bded4dfd59 338 SUPERFAMILY SSF51735 1 330 8.1E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2107 6ff9b974b039f624979009bded4dfd59 338 Gene3D G3DSA:3.40.50.720 1 334 4.1E-63 T 12-10-2018 YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 SMART SM00382 38 228 2.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 SMART SM00382 288 483 0.057 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 Pfam PF00005 ABC transporter 29 180 7.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 Gene3D G3DSA:3.40.50.300 251 503 4.8E-45 T 12-10-2018 YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 Gene3D G3DSA:3.40.50.300 8 247 1.1E-56 T 12-10-2018 YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 SUPERFAMILY SSF52540 12 239 1.43E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 SUPERFAMILY SSF52540 268 493 1.92E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 Pfam PF00005 ABC transporter 280 434 1.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3266 3d6e021932e64a5b3857c4613c2b8025 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 SMART SM00448 3 116 1.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 6.0E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 Pfam PF00072 Response regulator receiver domain 6 116 1.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 Gene3D G3DSA:3.40.50.12740 3 208 1.2E-57 T 12-10-2018 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 SUPERFAMILY SSF46894 144 208 1.19E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 SUPERFAMILY SSF52172 2 128 6.55E-31 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3833 0ef2f4326048d9affa002db6a39306e1 210 SMART SM00421 146 203 8.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 Gene3D G3DSA:3.40.47.10 271 424 4.6E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 SUPERFAMILY SSF53901 226 422 4.32E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 257 9.9E-58 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 3.4E-164 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 SMART SM00825 Beta-ketoacyl synthase 6 424 4.4E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 SUPERFAMILY SSF53901 4 262 5.01E-71 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 Gene3D G3DSA:3.40.47.10 1 265 1.6E-84 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 PIRSF PIRSF000447 1 424 2.6E-161 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YpsIP31758_2547 bf4e7b1082a1a8fadf929c714b4d6627 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 2.4E-35 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.315 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 168 187 1.9E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 86 101 1.9E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 58 74 1.9E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 PRINTS PR00773 GrpE protein signature 141 156 1.9E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 SUPERFAMILY SSF51064 134 190 1.57E-18 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Gene3D G3DSA:2.30.22.10 133 189 1.1E-25 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 SUPERFAMILY SSF58014 44 133 3.01E-26 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Pfam PF01025 GrpE 16 189 4.7E-47 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YpsIP31758_2887 3f1acc9f68f56ec6370e1b2b6b8d1d9e 192 Gene3D G3DSA:3.90.20.20 29 132 1.1E-33 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 YpsIP31758_3868 3a698615de089f81ffb00ab37a7712cf 181 SUPERFAMILY SSF55729 2 169 2.2E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3868 3a698615de089f81ffb00ab37a7712cf 181 Gene3D G3DSA:3.40.630.30 1 171 1.3E-36 T 12-10-2018 YpsIP31758_3868 3a698615de089f81ffb00ab37a7712cf 181 Pfam PF13673 Acetyltransferase (GNAT) domain 49 147 1.8E-8 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_A0066 ce36c9ff16cfba43bb4b2a2616fa67af 317 SUPERFAMILY SSF52540 73 272 7.14E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0066 ce36c9ff16cfba43bb4b2a2616fa67af 317 Gene3D G3DSA:3.40.50.300 91 317 1.8E-45 T 12-10-2018 YpsIP31758_A0066 ce36c9ff16cfba43bb4b2a2616fa67af 317 Pfam PF00437 Type II/IV secretion system protein 81 246 9.8E-24 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0833 628af073ee1e0d677594a5767701e871 294 Gene3D G3DSA:3.60.110.10 1 293 2.9E-105 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_0833 628af073ee1e0d677594a5767701e871 294 SUPERFAMILY SSF56317 1 285 1.7E-81 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_0833 628af073ee1e0d677594a5767701e871 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 3.3E-53 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YpsIP31758_0833 628af073ee1e0d677594a5767701e871 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 285 3.1E-146 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 YpsIP31758_3914 3476b68d211c1d01328d01318d8bbe2d 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.7E-74 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3914 3476b68d211c1d01328d01318d8bbe2d 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 33.968 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3914 3476b68d211c1d01328d01318d8bbe2d 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 4.1E-64 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3914 3476b68d211c1d01328d01318d8bbe2d 201 Gene3D G3DSA:3.40.1370.10 3 201 2.8E-68 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3914 3476b68d211c1d01328d01318d8bbe2d 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-31 T 12-10-2018 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 Pfam PF04397 LytTr DNA-binding domain 143 235 1.3E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 SMART SM00448 2 112 1.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 SMART SM00850 142 236 4.1E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 Pfam PF00072 Response regulator receiver domain 4 112 7.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 Gene3D G3DSA:2.40.50.1020 133 237 7.7E-12 T 12-10-2018 YpsIP31758_3221 e0ff2373afa67c83808db3dcca32f0f3 238 SUPERFAMILY SSF52172 1 126 8.82E-33 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0498 f2e69ba2d1b39804de49bf43176175ae 169 Gene3D G3DSA:3.30.2010.10 55 161 1.1E-7 T 12-10-2018 YpsIP31758_0498 f2e69ba2d1b39804de49bf43176175ae 169 Pfam PF01863 Protein of unknown function DUF45 46 149 1.9E-11 T 12-10-2018 IPR002725 Protein of unknown function DUF45 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.630.30 293 441 1.3E-38 T 12-10-2018 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.1160.10 7 292 7.1E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 2.6E-201 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00696 Amino acid kinase family 25 266 1.8E-31 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 1.9E-7 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 PIRSF PIRSF000423 1 441 3.5E-211 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.354 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF53633 4 290 4.19E-70 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0993 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF55729 296 418 2.96E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 SUPERFAMILY SSF53335 190 370 1.61E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 50.267 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 Gene3D G3DSA:3.40.50.150 184 380 1.5E-48 T 12-10-2018 YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 Gene3D G3DSA:3.40.50.150 8 181 3.4E-57 T 12-10-2018 YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 Pfam PF05175 Methyltransferase small domain 200 371 8.1E-53 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_0500 d4891a9353477c5d85f48760fb099640 395 PIRSF PIRSF037565 1 375 1.4E-166 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 YpsIP31758_3269 32305a99cb01fd4449f5f7fa5a878653 293 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 4.0E-36 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YpsIP31758_3269 32305a99cb01fd4449f5f7fa5a878653 293 SUPERFAMILY SSF51658 13 278 5.11E-57 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_3269 32305a99cb01fd4449f5f7fa5a878653 293 Gene3D G3DSA:3.20.20.150 2 286 1.0E-74 T 12-10-2018 YpsIP31758_3269 32305a99cb01fd4449f5f7fa5a878653 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 283 4.1E-137 T 12-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 YpsIP31758_1206 89e204ef4aff388683db5c3971debde3 169 PIRSF PIRSF009103 15 169 2.2E-66 T 12-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YpsIP31758_1206 89e204ef4aff388683db5c3971debde3 169 SUPERFAMILY SSF89872 43 168 6.93E-51 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily YpsIP31758_1206 89e204ef4aff388683db5c3971debde3 169 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 52 167 8.3E-50 T 12-10-2018 YpsIP31758_1206 89e204ef4aff388683db5c3971debde3 169 Gene3D G3DSA:3.40.1420.10 42 169 1.0E-45 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 Pfam PF00929 Exonuclease 20 194 3.1E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.4E-105 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 117.089 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 Gene3D G3DSA:3.30.420.10 9 215 4.6E-58 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 SMART SM00479 18 203 8.1E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_1759 a1fd3d7a46590ebf1c3f7ff856c9e398 215 SUPERFAMILY SSF53098 9 207 9.11E-58 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_1769 20370cb737ffe21ec44ee344b1b36982 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 6.0E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 YpsIP31758_2332 9459429422285cda8e1bf1fe0984a8c1 140 Pfam PF06366 Flagellar protein FlhE 35 140 1.6E-36 T 12-10-2018 IPR009420 Flagellar protein FlhE YpsIP31758_1974 0901941b6a45182f4709e592f68500f8 286 Gene3D G3DSA:1.10.10.10 3 91 6.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1974 0901941b6a45182f4709e592f68500f8 286 SUPERFAMILY SSF46785 5 79 3.47E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1974 0901941b6a45182f4709e592f68500f8 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Gene3D G3DSA:3.30.9.50 78 267 8.9E-98 T 12-10-2018 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Pfam PF01494 FAD binding domain 2 343 2.0E-22 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 SUPERFAMILY SSF51905 2 382 1.21E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 9.5E-133 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.7E-146 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 Gene3D G3DSA:3.50.50.60 3 336 8.9E-98 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.4E-15 T 12-10-2018 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 8.4E-15 T 12-10-2018 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 8.4E-15 T 12-10-2018 YpsIP31758_0861 a1911bd919fafdd5ac5ec9bb004bcb1c 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.4E-15 T 12-10-2018 YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF48498 86 176 2.36E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF46689 10 73 9.48E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.71 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 2.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 Gene3D G3DSA:1.10.357.10 9 198 6.7E-73 T 12-10-2018 YpsIP31758_0058 a474a8c6dc171e169fb3a3c4dfd50011 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YpsIP31758_2399 983fa8fef9598a6fda3cfb91ac639749 330 Gene3D G3DSA:3.40.190.170 33 330 1.2E-112 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily YpsIP31758_2399 983fa8fef9598a6fda3cfb91ac639749 330 PIRSF PIRSF006470 5 330 2.8E-97 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 YpsIP31758_2399 983fa8fef9598a6fda3cfb91ac639749 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 315 7.6E-71 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 YpsIP31758_2399 983fa8fef9598a6fda3cfb91ac639749 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 291 8.4E-63 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 SUPERFAMILY SSF53613 5 306 6.08E-86 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.435 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 9.0E-113 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 35 54 2.0E-37 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 175 190 2.0E-37 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 219 230 2.0E-37 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 8 29 2.0E-37 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 107 120 2.0E-37 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 Gene3D G3DSA:3.40.1190.20 3 302 4.4E-104 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0008 9a27d5dc2a90871a627151e29ae36f09 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 1.2E-77 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PIRSF PIRSF005419 15 692 8.5E-241 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 Gene3D G3DSA:3.40.30.60 361 504 2.8E-51 T 12-10-2018 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 Gene3D G3DSA:1.10.8.540 505 593 1.1E-29 T 12-10-2018 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 6.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 Gene3D G3DSA:1.10.490.80 596 689 5.7E-8 T 12-10-2018 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 9.0E-278 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 YpsIP31758_2333 fd28ac861e3b4aae258b569279421f50 692 Pfam PF00771 FHIPEP family 31 681 2.7E-267 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 SMART SM01133 16 252 3.8E-78 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 Pfam PF01791 DeoC/LacD family aldolase 18 250 4.6E-45 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.645 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 PIRSF PIRSF001357 11 261 1.7E-79 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 Gene3D G3DSA:3.20.20.70 7 265 1.1E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 3.7E-79 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3498 74ad069f88f06f66b5ea8ab7758ef633 265 SUPERFAMILY SSF51569 13 252 1.88E-80 T 12-10-2018 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 Pfam PF03466 LysR substrate binding domain 93 288 2.0E-20 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 Gene3D G3DSA:1.10.10.10 5 96 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.7E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 SUPERFAMILY SSF46785 3 85 1.11E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 Gene3D G3DSA:3.40.190.10 99 284 5.9E-33 T 12-10-2018 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 SUPERFAMILY SSF53850 93 292 5.07E-24 T 12-10-2018 YpsIP31758_1545 861b975e65e3b1abf6ce7fa8e0a9b99f 308 Gene3D G3DSA:3.40.190.10 159 259 5.9E-33 T 12-10-2018 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF46785 1 61 5.96E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 8.8E-13 T 12-10-2018 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:1.10.10.10 1 50 1.9E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 SMART SM00344 1 107 2.1E-25 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF54909 62 136 8.4E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 131 1.6E-10 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YpsIP31758_1625 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:3.30.70.920 51 136 1.4E-16 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 2.6E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF55021 338 412 1.59E-19 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.30.70.260 328 412 1.6E-32 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 14 312 2.7E-110 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF51735 108 295 2.6E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF52283 7 135 8.72E-49 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 109 297 2.7E-110 T 12-10-2018 YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF01842 ACT domain 347 404 9.5E-7 T 12-10-2018 IPR002912 ACT domain YpsIP31758_0856 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 7.9E-37 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 Pfam PF00005 ABC transporter 17 163 4.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 SUPERFAMILY SSF52540 1 240 1.41E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 SUPERFAMILY SSF54631 269 306 1.97E-5 T 12-10-2018 YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 Gene3D G3DSA:3.40.50.300 1 244 4.4E-77 T 12-10-2018 YpsIP31758_2784 2a54208a3643c71331c93c0fb413e870 312 SMART SM00382 26 213 2.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00959 5 47 8.6E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:2.40.50.140 48 117 2.0E-35 T 12-10-2018 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00357 52 118 2.0E-18 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.558 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00382 170 355 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.9E-22 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:1.10.720.10 1 47 4.6E-24 T 12-10-2018 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.8E-16 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.2E-220 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:3.40.50.300 130 417 9.7E-134 T 12-10-2018 YpsIP31758_0180 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.2E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 YpsIP31758_1813 0226f01764f920d2bea4a723edb56a37 318 Gene3D G3DSA:1.10.10.10 2 53 3.8E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1813 0226f01764f920d2bea4a723edb56a37 318 Gene3D G3DSA:3.40.50.1360 54 313 7.1E-66 T 12-10-2018 YpsIP31758_1813 0226f01764f920d2bea4a723edb56a37 318 Pfam PF04198 Putative sugar-binding domain 58 314 4.1E-69 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 YpsIP31758_1813 0226f01764f920d2bea4a723edb56a37 318 SUPERFAMILY SSF100950 58 314 2.47E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Pfam PF09209 Domain of unknown function (DUF1956) 104 230 8.0E-35 T 12-10-2018 IPR015292 Transcription regulator YbiH, C-terminal YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 7.5E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Gene3D G3DSA:1.10.357.10 73 235 1.1E-51 T 12-10-2018 YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 SUPERFAMILY SSF46689 13 94 3.75E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 SUPERFAMILY SSF48498 101 231 9.56E-37 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2811 dd9d1762d2ed0fa08fa7419d2971ea4b 236 Gene3D G3DSA:1.10.10.60 12 72 8.8E-26 T 12-10-2018 YpsIP31758_3519 b7b61277ca3754665e0fdc6282f7dab6 306 Gene3D G3DSA:1.10.10.10 1 51 1.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3519 b7b61277ca3754665e0fdc6282f7dab6 306 Gene3D G3DSA:3.40.50.1360 57 304 8.5E-84 T 12-10-2018 YpsIP31758_3519 b7b61277ca3754665e0fdc6282f7dab6 306 Pfam PF04198 Putative sugar-binding domain 55 304 2.0E-68 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 YpsIP31758_3519 b7b61277ca3754665e0fdc6282f7dab6 306 SUPERFAMILY SSF100950 55 305 1.3E-58 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2563 223815a2f9b3cf557984d26a57bad049 569 SUPERFAMILY SSF47090 266 309 3.84E-11 T 12-10-2018 IPR036365 PGBD-like superfamily YpsIP31758_2563 223815a2f9b3cf557984d26a57bad049 569 Pfam PF03734 L,D-transpeptidase catalytic domain 328 497 5.4E-29 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YpsIP31758_2563 223815a2f9b3cf557984d26a57bad049 569 SUPERFAMILY SSF141523 329 487 3.79E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YpsIP31758_2563 223815a2f9b3cf557984d26a57bad049 569 Pfam PF01471 Putative peptidoglycan binding domain 267 301 2.9E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like YpsIP31758_0643 c52687ead91a6960333a825c6b884314 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 119 2.7E-27 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_0643 c52687ead91a6960333a825c6b884314 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 239 3.6E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_0643 c52687ead91a6960333a825c6b884314 243 Pfam PF00460 Flagella basal body rod protein 5 35 5.6E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_0643 c52687ead91a6960333a825c6b884314 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 2.4E-55 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 YpsIP31758_0643 c52687ead91a6960333a825c6b884314 243 SUPERFAMILY SSF117143 77 165 9.94E-10 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 1.3E-73 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 569 2.2E-171 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 Pfam PF08345 Flagellar M-ring protein C-terminal 255 447 1.2E-49 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 Gene3D G3DSA:3.30.300.30 125 226 1.8E-9 T 12-10-2018 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PIRSF PIRSF004862 8 570 1.3E-162 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 156 170 6.3E-43 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 124 142 6.3E-43 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 199 217 6.3E-43 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 268 286 6.3E-43 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_2290 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 375 399 6.3E-43 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YpsIP31758_3629 7d3845f09043e054cfdbc33442365df1 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 183 2.2E-76 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YpsIP31758_3629 7d3845f09043e054cfdbc33442365df1 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 2.7E-81 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YpsIP31758_3629 7d3845f09043e054cfdbc33442365df1 187 Gene3D G3DSA:3.40.30.10 38 185 3.1E-7 T 12-10-2018 YpsIP31758_3629 7d3845f09043e054cfdbc33442365df1 187 SUPERFAMILY SSF52833 49 181 2.87E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3790 8d498c6b2355f69714186fe303a5412a 353 SUPERFAMILY SSF56059 109 314 9.3E-20 T 12-10-2018 YpsIP31758_3790 8d498c6b2355f69714186fe303a5412a 353 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 4 340 4.7E-109 T 12-10-2018 IPR011226 ATP-grasp family YpsIP31758_3790 8d498c6b2355f69714186fe303a5412a 353 PIRSF PIRSF029120 1 353 8.8E-175 T 12-10-2018 IPR011226 ATP-grasp family YpsIP31758_3790 8d498c6b2355f69714186fe303a5412a 353 Gene3D G3DSA:3.30.470.20 109 351 1.2E-11 T 12-10-2018 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.642 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:1.20.58.930 387 482 6.5E-233 T 12-10-2018 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.0E-73 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:3.20.20.10 94 370 6.5E-233 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.1E-269 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF51419 93 370 1.29E-67 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:2.40.37.10 39 591 6.5E-233 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 368 1.2E-67 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 PIRSF PIRSF001336 17 659 4.8E-254 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YpsIP31758_0843 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF50621 482 588 1.57E-8 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF46600 620 667 2.48E-12 T 12-10-2018 IPR036876 UVR domain superfamily YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF00271 Helicase conserved C-terminal domain 439 544 3.7E-17 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 SMART SM00490 460 546 6.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF52540 37 579 3.26E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 SUPERFAMILY SSF52540 4 415 5.33E-139 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 SMART SM00487 9 426 3.3E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF02151 UvrB/uvrC motif 632 666 1.5E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:4.10.860.10 611 671 1.8E-21 T 12-10-2018 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 415 596 2.2E-48 T 12-10-2018 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 1 241 2.7E-75 T 12-10-2018 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Gene3D G3DSA:3.40.50.300 275 414 3.0E-52 T 12-10-2018 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.5E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Pfam PF04851 Type III restriction enzyme, res subunit 15 92 3.7E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.955 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 YpsIP31758_2839 f84396a663e609afaaa3ccc52ae18300 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 Gene3D G3DSA:3.30.479.30 46 178 4.4E-42 T 12-10-2018 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 SMART SM00244 18 176 8.0E-59 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 128 151 2.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 171 192 2.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 108 125 2.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 152 170 2.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 73 94 2.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 SUPERFAMILY SSF117892 49 183 1.11E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily YpsIP31758_3024 c742e17a8d0fdf4bde1691e6c777e3ca 304 Pfam PF01145 SPFH domain / Band 7 family 22 200 2.5E-31 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_0312 6a84c2f5ceeb9e506023cf38e7834dd4 172 Gene3D G3DSA:2.30.110.20 2 172 1.4E-67 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0312 6a84c2f5ceeb9e506023cf38e7834dd4 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.1E-64 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_0312 6a84c2f5ceeb9e506023cf38e7834dd4 172 SUPERFAMILY SSF141452 3 168 1.57E-39 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0312 6a84c2f5ceeb9e506023cf38e7834dd4 172 Pfam PF05638 Type VI secretion system effector, Hcp 7 155 2.0E-32 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_0596 422612965109e641700a3e523d24446c 256 SUPERFAMILY SSF48452 55 225 2.47E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0596 422612965109e641700a3e523d24446c 256 Gene3D G3DSA:1.25.40.10 13 237 3.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 448 1.1E-127 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 292 305 5.8E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 306 319 5.8E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 401 415 5.8E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 386 400 5.8E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 SUPERFAMILY SSF56322 4 452 3.4E-147 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Pfam PF00425 chorismate binding enzyme 190 444 6.6E-94 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.4E-28 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_2353 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Gene3D G3DSA:3.60.120.10 3 453 2.4E-173 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 1.0E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 1.0E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 463 478 1.0E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 1.0E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 PRINTS PR00132 Glycosyl hydrolase family 2 signature 547 562 1.0E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Gene3D G3DSA:2.60.40.10 641 747 1.9E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Gene3D G3DSA:3.20.20.80 350 638 3.9E-124 T 12-10-2018 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 61 226 3.4E-64 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Pfam PF02929 Beta galactosidase small chain 795 1060 5.5E-58 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SUPERFAMILY SSF49785 22 226 3.12E-70 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Gene3D G3DSA:2.60.120.260 12 226 3.0E-80 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SMART SM01038 790 1063 1.1E-117 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Pfam PF00703 Glycosyl hydrolases family 2 228 349 3.1E-11 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SUPERFAMILY SSF49303 637 746 6.23E-28 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Gene3D G3DSA:2.70.98.10 776 1065 4.7E-88 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SUPERFAMILY SSF49303 228 349 1.67E-20 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 463 477 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 644 1.2E-113 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Pfam PF16353 Domain of unknown function(DUF4981) 655 743 1.1E-14 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SUPERFAMILY SSF74650 778 1062 1.73E-91 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 SUPERFAMILY SSF51445 351 638 5.18E-99 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Gene3D G3DSA:2.60.40.10 227 349 3.0E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1629 cad73418c6013030afd27ae6efc310d6 1066 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1065 17.751 T 12-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 4.5E-99 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 SUPERFAMILY SSF53720 10 434 1.31E-86 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Pfam PF00815 Histidinol dehydrogenase 31 430 3.5E-165 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PIRSF PIRSF000099 3 433 2.8E-168 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 40.978 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Gene3D G3DSA:3.40.50.1980 36 235 2.1E-122 T 12-10-2018 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 2.9E-159 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YpsIP31758_2429 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Gene3D G3DSA:3.40.50.1980 237 352 2.1E-122 T 12-10-2018 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 PIRSF PIRSF000179 1 118 2.4E-51 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 2.0E-48 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 Gene3D G3DSA:1.20.1300.10 1 118 3.4E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 SUPERFAMILY SSF81343 1 118 1.16E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.641 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 YpsIP31758_3670 48cc513ee034453d5ceb1da451c76c5b 118 Pfam PF02313 Fumarate reductase subunit D 5 116 2.2E-50 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 YpsIP31758_0092 5ec3dca28eee6311c9d0a5abac553886 475 PIRSF PIRSF002457 1 474 3.0E-131 T 12-10-2018 IPR030676 Citrate carrier CitT-related YpsIP31758_0092 5ec3dca28eee6311c9d0a5abac553886 475 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 1.5E-131 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YpsIP31758_0092 5ec3dca28eee6311c9d0a5abac553886 475 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 473 1.0E-144 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YpsIP31758_3384 0783bb88ca04f9353619b560c4e3474b 275 Pfam PF03799 Cell division protein FtsQ 130 244 2.9E-25 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB YpsIP31758_3384 0783bb88ca04f9353619b560c4e3474b 275 Gene3D G3DSA:3.10.20.310 58 126 2.4E-33 T 12-10-2018 YpsIP31758_3384 0783bb88ca04f9353619b560c4e3474b 275 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.446 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 YpsIP31758_3384 0783bb88ca04f9353619b560c4e3474b 275 Pfam PF08478 POTRA domain, FtsQ-type 57 126 2.7E-22 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type YpsIP31758_3384 0783bb88ca04f9353619b560c4e3474b 275 Gene3D G3DSA:3.40.50.11690 127 259 1.2E-48 T 12-10-2018 YpsIP31758_1007 07ed166dbc220093cd47280be381b8ae 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.2E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1007 07ed166dbc220093cd47280be381b8ae 257 Gene3D G3DSA:3.30.2350.10 3 235 3.0E-61 T 12-10-2018 YpsIP31758_1007 07ed166dbc220093cd47280be381b8ae 257 SUPERFAMILY SSF55120 2 237 2.56E-62 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1007 07ed166dbc220093cd47280be381b8ae 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 176 4.4E-25 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 Gene3D G3DSA:2.160.20.10 74 454 9.6E-92 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00912 70 182 6.3E-37 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1568 1589 4600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 625 646 990.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 816 840 6100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 999 1040 690.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1533 1554 4300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1673 1697 93.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1719 1743 4900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 777 809 2100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1159 1180 2800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 1395 1419 6300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 557 593 4200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SMART SM00710 210 232 9100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 Pfam PF05860 haemagglutination activity domain 89 178 1.3E-22 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 SUPERFAMILY SSF51126 64 363 1.54E-47 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_3174 06adb2d08e8a454b0d488a51bf9ad901 1910 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.4E-4 T 12-10-2018 IPR024973 ESPR domain YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 SUPERFAMILY SSF53335 396 701 2.15E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.40.50.150 484 702 2.8E-73 T 12-10-2018 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.30.2130.30 5 255 3.0E-146 T 12-10-2018 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 SMART SM00981 56 154 1.3E-18 T 12-10-2018 IPR004114 THUMP domain GO:0003723 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF02926 THUMP domain 23 152 2.5E-15 T 12-10-2018 IPR004114 THUMP domain GO:0003723 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 PIRSF PIRSF037618 1 703 1.7E-293 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.40.50.150 169 372 3.0E-146 T 12-10-2018 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 453 664 4.8E-19 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Gene3D G3DSA:3.30.750.80 392 483 2.2E-36 T 12-10-2018 YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 SUPERFAMILY SSF53335 146 373 3.98E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.7E-62 T 12-10-2018 IPR000241 Putative RNA methylase domain YpsIP31758_2552 d9721131a9cd6c7fb7d08e1b09472542 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.232 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 YpsIP31758_0791 c34406d120a2da20fe03711784d43599 251 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 76 208 7.1E-48 T 12-10-2018 IPR013423 Conserved hypothetical protein CHP02594 YpsIP31758_0791 c34406d120a2da20fe03711784d43599 251 SUPERFAMILY SSF54001 111 213 6.38E-5 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_0791 c34406d120a2da20fe03711784d43599 251 Pfam PF05257 CHAP domain 109 186 9.8E-7 T 12-10-2018 IPR007921 CHAP domain YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF46785 1 70 6.61E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:1.10.10.10 1 94 4.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.90.1150.10 96 465 4.3E-102 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.40.640.10 141 359 4.3E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SMART SM00345 7 66 5.9E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00155 Aminotransferase class I and II 146 446 3.0E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_2122 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF53383 60 468 3.13E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0763 ba71207dc0025ff27dfd593a51ebf9f7 69 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 19 59 1.2E-8 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA YpsIP31758_0763 ba71207dc0025ff27dfd593a51ebf9f7 69 Gene3D G3DSA:1.10.238.160 11 67 1.5E-18 T 12-10-2018 YpsIP31758_3802 d4cd4c7bb04b71493577e09fe815f294 345 SUPERFAMILY SSF144064 4 339 7.46E-132 T 12-10-2018 YpsIP31758_3802 d4cd4c7bb04b71493577e09fe815f294 345 Gene3D G3DSA:3.40.1570.10 13 281 3.6E-135 T 12-10-2018 YpsIP31758_3802 d4cd4c7bb04b71493577e09fe815f294 345 Gene3D G3DSA:3.40.1570.10 82 332 3.6E-135 T 12-10-2018 YpsIP31758_3802 d4cd4c7bb04b71493577e09fe815f294 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 3.3E-40 T 12-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YpsIP31758_3802 d4cd4c7bb04b71493577e09fe815f294 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 1.6E-43 T 12-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01021 OMPA domain signature 281 297 1.5E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01021 OMPA domain signature 234 256 1.5E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01021 OMPA domain signature 266 281 1.5E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 ProSitePatterns PS01068 OmpA-like domain. 268 312 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 SUPERFAMILY SSF103088 221 345 1.96E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 Pfam PF01389 OmpA-like transmembrane domain 27 204 6.2E-68 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 Pfam PF00691 OmpA family 233 326 6.3E-19 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 SUPERFAMILY SSF56925 26 204 1.36E-40 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 Gene3D G3DSA:3.30.1330.60 210 354 4.7E-54 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 Gene3D G3DSA:2.40.160.20 26 202 9.3E-70 T 12-10-2018 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 222 237 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 324 337 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 112 128 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 189 203 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 251 270 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 290 309 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_2542 0dbd781e537d40ac73549e0a261b7606 357 PRINTS PR01022 Outer membrane protein A signature 175 189 6.3E-63 T 12-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YpsIP31758_3013 48efc81959648d98ca3bb328f093a5db 70 Pfam PF13275 S4 domain 8 68 4.3E-22 T 12-10-2018 YpsIP31758_3013 48efc81959648d98ca3bb328f093a5db 70 Gene3D G3DSA:3.10.290.10 1 70 3.1E-25 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_3013 48efc81959648d98ca3bb328f093a5db 70 SUPERFAMILY SSF55174 6 69 7.2E-19 T 12-10-2018 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 2.9E-40 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 SUPERFAMILY SSF52096 2 303 3.7E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 494 1.4E-59 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 8.7E-26 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.264 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Gene3D G3DSA:3.40.50.720 314 496 6.9E-65 T 12-10-2018 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Gene3D G3DSA:3.90.226.10 1 311 5.9E-95 T 12-10-2018 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 SUPERFAMILY SSF48179 495 611 7.82E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 Gene3D G3DSA:1.10.1040.50 497 709 9.1E-74 T 12-10-2018 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 SUPERFAMILY SSF51735 316 495 3.78E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 YpsIP31758_0283 1d14f158449baef9ab82cf700b1b13e4 729 SUPERFAMILY SSF48179 622 714 1.62E-22 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_4101 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Gene3D G3DSA:3.40.50.2300 29 305 2.1E-122 T 12-10-2018 YpsIP31758_4101 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Gene3D G3DSA:3.40.50.2300 129 317 2.1E-122 T 12-10-2018 YpsIP31758_4101 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 6.3E-163 T 12-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 YpsIP31758_4101 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 SUPERFAMILY SSF53822 24 317 5.62E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_4101 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Pfam PF13407 Periplasmic binding protein domain 38 285 3.1E-60 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_4068 36386217cef3b2c085f2ae8fe3df33c5 234 SUPERFAMILY SSF56935 53 234 3.66E-10 T 12-10-2018 YpsIP31758_4068 36386217cef3b2c085f2ae8fe3df33c5 234 Gene3D G3DSA:2.40.160.40 21 234 2.2E-75 T 12-10-2018 YpsIP31758_4068 36386217cef3b2c085f2ae8fe3df33c5 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 8.1E-79 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin YpsIP31758_2324 45b7ae7312658bc95de91bf697f30e79 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.1E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2324 45b7ae7312658bc95de91bf697f30e79 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 4.8E-42 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YpsIP31758_2324 45b7ae7312658bc95de91bf697f30e79 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_2324 45b7ae7312658bc95de91bf697f30e79 137 PIRSF PIRSF002889 1 137 4.9E-41 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YpsIP31758_0603 c6b6d16afe8a4956d35a4438deeebefe 132 Pfam PF01478 Type IV leader peptidase family 4 100 7.7E-12 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YpsIP31758_0603 c6b6d16afe8a4956d35a4438deeebefe 132 Gene3D G3DSA:1.20.120.1220 1 132 3.0E-5 T 12-10-2018 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 ProSitePatterns PS01087 Radical activating enzymes signature. 4 25 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 Pfam PF13353 4Fe-4S single cluster domain 2 141 2.4E-51 T 12-10-2018 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 1 141 1.9E-59 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 PIRSF PIRSF000368 1 144 1.2E-55 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 SUPERFAMILY SSF102114 14 101 1.45E-6 T 12-10-2018 YpsIP31758_3557 3aa923efaceffc43c0b26101c1d8fbb5 144 Gene3D G3DSA:3.20.20.70 1 144 1.1E-19 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 29 240 2.62E-27 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 Gene3D G3DSA:3.30.830.10 8 256 8.0E-53 T 12-10-2018 YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 Pfam PF05193 Peptidase M16 inactive domain 201 378 7.0E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 Gene3D G3DSA:3.30.830.10 257 472 4.3E-104 T 12-10-2018 YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 Pfam PF00675 Insulinase (Peptidase family M16) 51 173 5.8E-11 T 12-10-2018 IPR011765 Peptidase M16, N-terminal YpsIP31758_4063 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 342 458 8.56E-7 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_1141 b041527537b65fcf9efd7e82da948961 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1141 b041527537b65fcf9efd7e82da948961 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 1.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1141 b041527537b65fcf9efd7e82da948961 86 Gene3D G3DSA:3.30.70.20 2 86 1.3E-35 T 12-10-2018 YpsIP31758_1141 b041527537b65fcf9efd7e82da948961 86 SUPERFAMILY SSF54862 5 63 3.87E-17 T 12-10-2018 YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 SUPERFAMILY SSF52540 13 155 1.19E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 Pfam PF01715 IPP transferase 46 291 6.4E-84 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:1.10.20.140 119 190 7.6E-104 T 12-10-2018 YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 1.0E-119 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.522 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YpsIP31758_3654 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:3.40.50.300 16 296 7.6E-104 T 12-10-2018 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 32.224 T 12-10-2018 IPR033747 Class I PurE YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 Gene3D G3DSA:3.40.50.7700 1 174 8.3E-79 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 SUPERFAMILY SSF52255 14 172 6.02E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 Pfam PF00731 AIR carboxylase 14 162 6.0E-63 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 SMART SM01001 13 164 3.4E-100 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 PIRSF PIRSF001338 10 173 5.0E-66 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 YpsIP31758_3017 c9db1f3a1a2359430423b0a20b0a6367 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 9.8E-65 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 SMART SM01134 74 235 4.0E-67 T 12-10-2018 YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 SMART SM00420 7 59 3.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 Pfam PF00455 DeoR C terminal sensor domain 77 234 1.8E-51 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 Gene3D G3DSA:1.10.10.10 2 58 3.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF46785 6 59 1.63E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF100950 76 237 3.63E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 2.1E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 2.1E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_0943 a470ebf96bb16239c575091472721c65 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 8.4E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 300 340 1.4E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 Gene3D G3DSA:2.160.20.10 65 353 5.6E-69 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 85 180 1.6E-17 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 SMART SM00912 67 184 1.1E-33 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 SUPERFAMILY SSF51126 69 346 6.28E-44 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_4077 c071abf63d6ff133fc75c702758f1b1d 463 Pfam PF05860 haemagglutination activity domain 70 183 3.3E-24 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 699 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 715 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 321 335 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 486 2.8E-28 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Pfam PF00403 Heavy-metal-associated domain 87 143 5.2E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Gene3D G3DSA:3.40.1110.10 483 614 6.8E-79 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Pfam PF00122 E1-E2 ATPase 272 451 3.8E-45 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 470 692 9.7E-35 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Gene3D G3DSA:3.40.50.1000 453 731 6.8E-79 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Gene3D G3DSA:3.30.70.100 81 151 5.1E-15 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 782 2.9E-172 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00941 Cadmium-transporting ATPase signature 256 276 5.5E-9 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00941 Cadmium-transporting ATPase signature 86 95 5.5E-9 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00941 Cadmium-transporting ATPase signature 97 118 5.5E-9 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00941 Cadmium-transporting ATPase signature 276 292 5.5E-9 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 PRINTS PR00941 Cadmium-transporting ATPase signature 337 353 5.5E-9 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 SUPERFAMILY SSF81665 224 768 4.45E-17 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 ProSitePatterns PS01047 Heavy-metal-associated domain. 88 117 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 474 480 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 Gene3D G3DSA:2.70.150.20 271 376 2.2E-29 T 12-10-2018 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 SUPERFAMILY SSF56784 470 780 1.06E-51 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 SUPERFAMILY SSF81653 274 371 3.66E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 581 758 3.4E-38 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 494 2.6E-35 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_0233 f99822ce910b41aeeb090cbc6e4d6a77 788 SUPERFAMILY SSF55008 82 146 1.7E-14 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 39.412 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF51735 30 209 4.59E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Gene3D G3DSA:1.10.1040.10 209 492 3.7E-126 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 4.6E-135 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 7.7E-26 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.2E-21 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF48179 210 343 2.04E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 SUPERFAMILY SSF48179 348 485 2.72E-41 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.2E-59 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YpsIP31758_0163 4fdfa4019742c322442f061acef11d27 492 Gene3D G3DSA:3.40.50.720 1 208 9.3E-87 T 12-10-2018 YpsIP31758_A0042 df484526ca4042b300925e68b176e941 100 Gene3D G3DSA:3.30.2310.20 3 94 2.5E-14 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YpsIP31758_A0042 df484526ca4042b300925e68b176e941 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 1.6E-15 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Pfam PF03466 LysR substrate binding domain 197 404 1.2E-28 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 6.5E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 114 171 1.3E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Gene3D G3DSA:1.10.10.10 111 192 2.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Gene3D G3DSA:1.10.10.10 4 93 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Gene3D G3DSA:3.40.190.10 203 394 7.2E-48 T 12-10-2018 YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 SUPERFAMILY SSF53850 198 407 5.98E-35 T 12-10-2018 YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 SUPERFAMILY SSF46785 10 88 9.58E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 Gene3D G3DSA:3.40.190.10 276 377 7.2E-48 T 12-10-2018 YpsIP31758_0095 d5b2271088df2288a0d1b0026a5c4caa 411 SUPERFAMILY SSF46785 110 190 6.82E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_B0059 135a9c7ec8e73ecce34624adbfaf081c 261 Pfam PF14284 PcfJ-like protein 163 243 1.3E-8 T 12-10-2018 IPR025586 PcfJ-like protein YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 Pfam PF09850 Type VI secretion system protein DotU 86 289 3.1E-48 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 Gene3D G3DSA:3.30.1330.60 310 457 4.6E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 SUPERFAMILY SSF103088 341 456 1.06E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 320 456 2.3E-51 T 12-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 Gene3D G3DSA:1.25.40.590 83 241 2.0E-41 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 86 293 2.2E-59 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_1372 e298aed25350abfb24653ec0280bdb0d 458 Pfam PF00691 OmpA family 352 450 1.7E-18 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.5E-243 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF00890 FAD binding domain 7 397 3.0E-114 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF51905 3 416 1.89E-70 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.90.700.10 237 363 2.3E-163 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-9 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-9 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF46977 444 583 7.46E-45 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 PIRSF PIRSF000171 1 579 1.6E-42 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:4.10.80.40 543 577 7.5E-19 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 7.5E-38 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF56425 227 358 1.79E-43 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.50.50.60 7 409 2.3E-163 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:1.20.58.100 424 538 4.0E-35 T 12-10-2018 YpsIP31758_3667 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 Pfam PF12146 Serine aminopeptidase, S33 32 268 4.8E-64 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 SUPERFAMILY SSF53474 9 282 2.19E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 Gene3D G3DSA:3.40.50.1820 2 286 2.0E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 SUPERFAMILY SSF53335 393 578 6.38E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 Pfam PF12147 Putative methyltransferase 276 583 1.8E-151 T 12-10-2018 IPR022744 Methyltransferase domain, putative YpsIP31758_3003 62d7fe119223206f179843f8dc12b5a6 587 Gene3D G3DSA:3.40.50.150 385 573 9.7E-15 T 12-10-2018 YpsIP31758_3148 6ac7abed1968c86c1b2de96aec254c71 249 Gene3D G3DSA:2.40.10.220 117 244 1.3E-34 T 12-10-2018 YpsIP31758_3148 6ac7abed1968c86c1b2de96aec254c71 249 Gene3D G3DSA:2.30.110.10 7 115 2.3E-6 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 YpsIP31758_3148 6ac7abed1968c86c1b2de96aec254c71 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 29.836 T 12-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 YpsIP31758_3148 6ac7abed1968c86c1b2de96aec254c71 249 Pfam PF07238 PilZ domain 115 233 7.1E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 YpsIP31758_3148 6ac7abed1968c86c1b2de96aec254c71 249 Pfam PF07317 Flagellar regulator YcgR 9 112 1.3E-30 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.40.50.2300 10 149 4.5E-47 T 12-10-2018 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.90.100.10 644 768 3.1E-40 T 12-10-2018 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.40.640.10 150 453 1.2E-89 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 26 144 1.4E-20 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 PIRSF PIRSF009393 6 768 2.0E-278 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 SUPERFAMILY SSF55904 623 763 2.35E-35 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 SUPERFAMILY SSF53383 150 620 1.45E-103 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 150 603 9.3E-159 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Gene3D G3DSA:3.90.1150.10 454 643 4.0E-74 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 394 408 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YpsIP31758_2781 3818b8febb79c94eafeb119a393eee92 768 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 628 757 7.7E-43 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 SUPERFAMILY SSF48113 428 734 2.21E-107 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Pfam PF00141 Peroxidase 401 709 1.7E-36 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Pfam PF00141 Peroxidase 81 393 1.0E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Gene3D G3DSA:1.10.420.10 586 710 1.3E-138 T 12-10-2018 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 4.3E-38 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 56 69 4.3E-38 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 30 52 4.3E-38 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 96 4.3E-38 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 4.3E-38 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 SUPERFAMILY SSF48113 31 428 1.22E-141 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Gene3D G3DSA:1.10.520.10 28 428 4.7E-201 T 12-10-2018 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 ProSitePatterns PS00436 Peroxidases active site signature. 94 105 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Hamap MF_01961 Catalase-peroxidase [katG]. 13 735 40.23 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 256 266 - T 12-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 17 735 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Gene3D G3DSA:1.10.420.20 194 395 4.7E-201 T 12-10-2018 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00458 Haem peroxidase superfamily signature 94 108 5.8E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 5.8E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00458 Haem peroxidase superfamily signature 640 655 5.8E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00458 Haem peroxidase superfamily signature 154 171 5.8E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 PRINTS PR00458 Haem peroxidase superfamily signature 172 184 5.8E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YpsIP31758_3254 c50678dae772cec473184bf4fbd2fce5 737 Gene3D G3DSA:1.10.520.10 431 734 1.3E-138 T 12-10-2018 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 SUPERFAMILY SSF49584 148 234 5.23E-23 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 Gene3D G3DSA:2.60.40.10 23 142 3.6E-44 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 SUPERFAMILY SSF49354 24 145 2.12E-40 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 PRINTS PR00969 Pili chaperone signature 70 91 1.4E-34 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-34 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-34 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 PRINTS PR00969 Pili chaperone signature 159 174 1.4E-34 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 PRINTS PR00969 Pili chaperone signature 100 117 1.4E-34 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 222 4.7E-14 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 Gene3D G3DSA:2.60.40.10 144 234 4.1E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0615 58802e4fe5859e7cc2b44c4abc6229e0 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 4.5E-40 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_3141 a497bd137dc88c9d3c78850d03b86f54 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.4E-129 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 YpsIP31758_3141 a497bd137dc88c9d3c78850d03b86f54 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.975 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 2.9E-34 T 12-10-2018 YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 SUPERFAMILY SSF56784 1 212 7.43E-28 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 Gene3D G3DSA:1.20.1440.100 15 87 6.2E-64 T 12-10-2018 YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 Gene3D G3DSA:3.40.50.1000 3 213 6.2E-64 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 198 2.4E-48 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like YpsIP31758_2664 34cdcedf32dec717e2aa6b798cdc59b7 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 4.4E-24 T 12-10-2018 YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 Gene3D G3DSA:3.40.47.10 6 260 1.4E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 Gene3D G3DSA:3.40.47.10 261 407 1.5E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 SUPERFAMILY SSF53901 216 405 3.7E-61 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 SMART SM00825 Beta-ketoacyl synthase 4 407 2.1E-12 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 2.8E-30 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 SUPERFAMILY SSF53901 1 254 2.1E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1411 ae625f21aa3007bab51b5ed208ca193a 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 1.8E-40 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 Gene3D G3DSA:3.30.750.80 73 181 2.1E-37 T 12-10-2018 YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 370 4.2E-27 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 SUPERFAMILY SSF88697 4 72 8.45E-16 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 SUPERFAMILY SSF53335 79 392 2.39E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 Gene3D G3DSA:2.30.130.10 1 72 3.3E-29 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 SMART SM00359 3 88 5.9E-12 T 12-10-2018 IPR002478 PUA domain GO:0003723 YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 Gene3D G3DSA:3.40.50.150 183 396 1.1E-68 T 12-10-2018 YpsIP31758_2531 6caeb163f1d3e165868a47e60acdce35 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 67.8 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.1E-146 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 SMART SM00382 44 227 1.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF50331 252 375 2.28E-17 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 Gene3D G3DSA:2.40.50.940 239 301 7.1E-11 T 12-10-2018 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 Pfam PF00005 ABC transporter 36 177 2.3E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 Gene3D G3DSA:2.40.50.140 302 356 7.1E-11 T 12-10-2018 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF52540 19 257 1.02E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 Gene3D G3DSA:3.40.50.300 19 238 4.1E-71 T 12-10-2018 YpsIP31758_2644 68ff700802ade253dec780e778cbeeba 377 Pfam PF08402 TOBE domain 295 375 3.5E-20 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_1529 f290d5eacfb6173ac8d898a7cb02c114 274 Gene3D G3DSA:1.10.3720.10 1 263 5.6E-57 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1529 f290d5eacfb6173ac8d898a7cb02c114 274 SUPERFAMILY SSF161098 2 270 4.21E-57 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1529 f290d5eacfb6173ac8d898a7cb02c114 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 2.2E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0159 b23821bbf5e576afe5342caf809ef733 153 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 151 2.7E-63 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 4.7E-97 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 Gene3D G3DSA:3.40.50.11270 12 97 4.7E-110 T 12-10-2018 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.382 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 Gene3D G3DSA:3.40.1010.20 98 197 4.7E-110 T 12-10-2018 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 Gene3D G3DSA:3.40.1010.20 6 283 4.7E-110 T 12-10-2018 YpsIP31758_3457 1e85807d33800bcac244a40fa8d48506 317 Pfam PF02401 LytB protein 3 283 1.6E-91 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 142 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 189 198 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 293 301 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 1.1E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:3.10.20.30 1 96 1.4E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:2.40.30.10 97 192 2.5E-22 T 12-10-2018 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF54292 2 96 1.21E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Gene3D G3DSA:3.40.50.80 197 326 5.9E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF52343 198 327 1.03E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00970 Oxidoreductase FAD-binding domain 103 194 2.1E-20 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 79 2.4E-14 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 Pfam PF00175 Oxidoreductase NAD-binding domain 205 307 3.2E-23 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_3052 c72c0bbccc477a4dea4fc13b857ad7e1 329 SUPERFAMILY SSF63380 100 195 1.55E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 267 430 2.0E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SUPERFAMILY SSF58104 216 429 1.03E-46 T 12-10-2018 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 132 6.6E-18 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 254 7.7E-15 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Pfam PF08448 PAS fold 145 248 1.8E-12 T 12-10-2018 IPR013656 PAS fold-4 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SMART SM00086 207 249 5.5E-4 T 12-10-2018 IPR001610 PAC motif YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SMART SM00086 85 127 1.3E-7 T 12-10-2018 IPR001610 PAC motif YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Gene3D G3DSA:1.10.287.950 244 432 1.7E-37 T 12-10-2018 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 347 376 1.3E-15 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 345 1.3E-15 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SMART SM00091 11 79 1.9 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SMART SM00091 132 199 0.0059 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Pfam PF13426 PAS domain 24 126 5.7E-15 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SUPERFAMILY SSF55785 23 124 2.62E-24 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Gene3D G3DSA:3.30.450.20 16 148 3.1E-26 T 12-10-2018 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 Gene3D G3DSA:3.30.450.20 149 243 3.7E-17 T 12-10-2018 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SMART SM00283 238 428 9.3E-9 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1492 5d803cc3354ff21db3d167a7edfdd4e5 434 SUPERFAMILY SSF55785 144 247 2.97E-22 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 PIRSF PIRSF038996 1 172 3.0E-71 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 Pfam PF00258 Flavodoxin 6 160 4.5E-33 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 SUPERFAMILY SSF52218 4 170 4.6E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 5.7E-77 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 YpsIP31758_2901 5834de8a9663be676c78792af08f6c8c 175 Gene3D G3DSA:3.40.50.360 2 175 3.2E-59 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 SMART SM00729 372 622 2.0E-6 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 Gene3D G3DSA:3.80.30.20 371 625 1.8E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 SUPERFAMILY SSF102114 361 649 1.7E-10 T 12-10-2018 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 376 396 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 640 2.5E-266 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 642 50.747 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 Pfam PF04055 Radical SAM superfamily 376 581 1.5E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 Pfam PF08497 Radical SAM N-terminal 28 375 9.5E-146 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal YpsIP31758_0585 d937e38a8586a2abd90bc987ad107f0e 787 Pfam PF11842 Domain of unknown function (DUF3362) 590 740 3.8E-41 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 SMART SM00649 9 141 1.3E-82 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.7E-24 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF46906 68 141 3.53E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.5E-65 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 12-10-2018 YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:3.30.1550.10 2 72 2.1E-35 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.8E-30 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:1.10.10.250 73 141 2.3E-26 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YpsIP31758_3864 1f1e2715f761021b0e104791c4b68765 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.272 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 SMART SM00525 191 211 2.6E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Gene3D G3DSA:1.10.340.30 21 132 1.4E-88 T 12-10-2018 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Pfam PF14815 NUDIX domain 233 342 8.7E-24 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Gene3D G3DSA:3.90.79.10 222 350 9.6E-12 T 12-10-2018 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 SUPERFAMILY SSF55811 220 346 4.19E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 6.0E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 2.3E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Pfam PF00633 Helix-hairpin-helix motif 100 127 9.0E-9 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 SUPERFAMILY SSF48150 2 225 4.4E-79 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 276 3.8E-124 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 SMART SM00478 39 190 1.3E-51 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_0819 31864ff3fc406bbe392449335e622270 371 Gene3D G3DSA:1.10.1670.10 10 211 1.4E-88 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 283 4.9E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 Gene3D G3DSA:2.40.30.170 42 293 1.2E-100 T 12-10-2018 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 Gene3D G3DSA:1.10.287.470 91 164 1.2E-100 T 12-10-2018 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 Gene3D G3DSA:2.40.50.100 56 200 1.2E-100 T 12-10-2018 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 SUPERFAMILY SSF111369 44 290 5.75E-79 T 12-10-2018 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 Gene3D G3DSA:2.40.420.20 294 363 1.2E-100 T 12-10-2018 YpsIP31758_3586 0ec34aaef45e4b2a66d66192e87c0c75 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 365 1.5E-81 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_1466 21febf70dbd4d0178cb024a55c80ac63 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 477 1.2E-132 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1466 21febf70dbd4d0178cb024a55c80ac63 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.725 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YpsIP31758_1466 21febf70dbd4d0178cb024a55c80ac63 487 Pfam PF00361 Proton-conducting membrane transporter 122 422 9.5E-81 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.7E-11 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SMART SM00929 88 128 1.9E-19 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Gene3D G3DSA:3.40.50.740 510 678 1.7E-10 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Gene3D G3DSA:2.20.25.90 221 274 1.1E-12 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 6.5E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SMART SM00926 221 275 1.9E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SUPERFAMILY SSF54862 81 213 5.44E-34 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SUPERFAMILY SSF53706 219 694 1.15E-79 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Gene3D G3DSA:3.10.20.740 1 127 3.4E-28 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Gene3D G3DSA:2.40.40.20 812 908 9.7E-10 T 12-10-2018 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SUPERFAMILY SSF50692 821 896 7.46E-14 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 661 1.7E-202 T 12-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Pfam PF00384 Molybdopterin oxidoreductase 554 637 1.3E-6 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 Pfam PF01568 Molydopterin dinucleotide binding domain 830 896 1.1E-7 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_1459 2f2ce8ac6b82f47012ebd3f4e3393306 914 SUPERFAMILY SSF54292 1 77 9.86E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SMART SM00400 36 90 1.4E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Pfam PF01807 CHC2 zinc finger 7 100 3.3E-40 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.1E-150 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.10.860.10 435 581 9.7E-53 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.580.10 1 101 4.1E-37 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF117023 447 578 2.48E-46 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Pfam PF13155 Toprim-like 263 348 2.0E-14 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.407 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF57783 4 100 5.27E-35 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 4.7E-44 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.20.50.20 368 426 2.6E-28 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 5.4E-35 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF56731 115 427 1.48E-114 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SMART SM00766 450 575 2.4E-55 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.980.10 115 240 1.8E-48 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 SMART SM00493 259 330 1.8E-22 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.40.1360.10 241 367 2.8E-44 T 12-10-2018 YpsIP31758_0554 7864b395b2d16ed221ecee88809660f4 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.6E-12 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 YpsIP31758_2768 43fe6b1ccc82963b02cfcdbdeabf8f46 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 9.0E-89 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 YpsIP31758_2768 43fe6b1ccc82963b02cfcdbdeabf8f46 242 SUPERFAMILY SSF53335 18 235 3.34E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2768 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 240 37.402 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 YpsIP31758_2768 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Gene3D G3DSA:3.40.50.150 16 240 6.8E-75 T 12-10-2018 YpsIP31758_2768 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Pfam PF13489 Methyltransferase domain 58 192 4.3E-25 T 12-10-2018 YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 Gene3D G3DSA:3.40.50.300 10 256 1.2E-67 T 12-10-2018 YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 SMART SM00382 36 238 5.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 SUPERFAMILY SSF52540 11 245 4.73E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 4.0E-121 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YpsIP31758_4168 90941fafa5978fb710eadef21efb7356 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.658 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF117916 14 85 8.83E-5 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 Gene3D G3DSA:3.40.50.300 96 349 3.7E-79 T 12-10-2018 YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF52540 109 356 3.35E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2454 c6b3b6a9c828649bcdc889729b416134 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 3.9E-99 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YpsIP31758_0915 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Gene3D G3DSA:1.10.3720.10 178 434 2.5E-62 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0915 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF160964 128 187 5.36E-8 T 12-10-2018 YpsIP31758_0915 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF161098 182 418 1.14E-52 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0915 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 9.0E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1347 a6624bb7a45ab38be8c3c7c7415357e9 174 PIRSF PIRSF034455 1 170 4.2E-45 T 12-10-2018 IPR014591 Uncharacterised conserved protein UCP034455 YpsIP31758_1347 a6624bb7a45ab38be8c3c7c7415357e9 174 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 1.3E-29 T 12-10-2018 IPR021125 Protein of unknown function DUF2127 YpsIP31758_B0129 fb852c5b241475016b6196c1df7ffd70 280 Pfam PF04221 RelB antitoxin 1 48 2.2E-7 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ YpsIP31758_B0129 fb852c5b241475016b6196c1df7ffd70 280 Gene3D G3DSA:1.10.1220.10 1 49 3.1E-11 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:1.10.150.240 16 95 2.1E-61 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 220 1.2E-74 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 7.4E-20 T 12-10-2018 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 SUPERFAMILY SSF56784 2 222 3.01E-47 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 54 195 1.3E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 2.5E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:3.40.50.1000 5 218 2.1E-61 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1837 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 SUPERFAMILY SSF56104 2 232 4.58E-75 T 12-10-2018 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.470.20 85 220 4.5E-90 T 12-10-2018 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.6 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 6.6E-79 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.200.20 7 231 4.5E-90 T 12-10-2018 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 Pfam PF01259 SAICAR synthetase 7 231 7.1E-58 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_1249 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 185 2.1E-30 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 PIRSF PIRSF005624 2 217 2.6E-47 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 Hamap MF_01389 Urease accessory protein UreG [ureG]. 10 211 45.13 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 Gene3D G3DSA:3.40.50.300 11 211 4.4E-45 T 12-10-2018 YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 SUPERFAMILY SSF52540 8 206 2.18E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1082 8eec57ebe472f595c5912a7e523754e9 220 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 13 209 6.6E-79 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 SUPERFAMILY SSF52540 326 572 1.52E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 Gene3D G3DSA:1.20.1560.10 7 319 1.3E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 SMART SM00382 358 556 4.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 Gene3D G3DSA:3.40.50.300 325 580 1.5E-79 T 12-10-2018 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 Pfam PF00005 ABC transporter 350 502 9.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 Pfam PF00664 ABC transporter transmembrane region 37 281 6.3E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0690 bd84c2c5dc60d0eecc9eae85b255611a 585 SUPERFAMILY SSF90123 21 318 4.84E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1816 131664239c0a6d655d00dad4f92021d5 123 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 27 115 3.0E-23 T 12-10-2018 IPR009241 Toxin HigB-like YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 SUPERFAMILY SSF47616 82 208 1.08E-28 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 4.6E-11 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.4E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 Gene3D G3DSA:3.40.30.10 12 200 1.0E-81 T 12-10-2018 YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 SUPERFAMILY SSF52833 11 110 1.39E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0462 8656eb7d126574fc90da04d90d49d062 213 Gene3D G3DSA:1.20.1050.10 89 193 1.0E-81 T 12-10-2018 YpsIP31758_B0116 520e6614396aeee4efa234200f7a2660 462 Pfam PF03743 Bacterial conjugation TrbI-like protein 335 457 2.3E-8 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SUPERFAMILY SSF47384 190 268 4.51E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Gene3D G3DSA:3.30.565.10 277 425 1.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SUPERFAMILY SSF55785 87 195 1.03E-12 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SUPERFAMILY SSF55874 259 423 8.51E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 2.1E-134 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Gene3D G3DSA:1.10.287.130 200 269 3.7E-23 T 12-10-2018 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 1.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Gene3D G3DSA:3.30.450.20 86 199 4.0E-9 T 12-10-2018 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 7.4E-9 T 12-10-2018 IPR000014 PAS domain YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.8E-28 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 1.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SMART SM00387 313 425 3.7E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 Pfam PF00989 PAS fold 99 193 3.9E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SMART SM00388 203 269 3.0E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3135 a5c73fb571f3ac32494e112347ece42f 438 SMART SM00091 98 165 1.5E-7 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.8E-125 T 12-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SMART SM00382 27 214 1.3E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SUPERFAMILY SSF52540 3 244 1.16E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 Pfam PF00005 ABC transporter 18 164 8.2E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 Gene3D G3DSA:3.40.50.300 2 263 5.8E-81 T 12-10-2018 YpsIP31758_1302 d64d9f39cf48f3bf9ab5f8b1bd1eb487 363 SUPERFAMILY SSF50331 239 326 2.15E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Gene3D G3DSA:3.40.190.10 113 314 8.0E-31 T 12-10-2018 YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 SUPERFAMILY SSF53850 117 550 1.63E-65 T 12-10-2018 YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.6E-17 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 69.366 T 12-10-2018 IPR023767 Transcriptional regulator SgrR YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 SUPERFAMILY SSF46785 4 56 4.71E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3411 4e94ff49586594fe9cf9c5c25e2ad1c0 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 4.6E-42 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 SUPERFAMILY SSF50129 57 241 8.18E-44 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 Gene3D G3DSA:3.40.50.720 219 356 8.1E-95 T 12-10-2018 YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 Gene3D G3DSA:3.90.180.10 68 396 8.1E-95 T 12-10-2018 YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 85 199 2.1E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 Pfam PF00107 Zinc-binding dehydrogenase 242 357 2.8E-23 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 SUPERFAMILY SSF51735 209 363 5.47E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1506 0db43a40bead8ad468f26b32a6802612 408 SMART SM00829 68 406 0.0012 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 SUPERFAMILY SSF52402 7 228 8.38E-61 T 12-10-2018 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 198 4.0E-53 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Pfam PF11734 TilS substrate C-terminal domain 372 444 2.4E-26 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 SUPERFAMILY SSF56037 336 444 3.66E-31 T 12-10-2018 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 302 23.358 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 372 416 7.3E-13 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Pfam PF01171 PP-loop family 15 193 4.4E-58 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 SMART SM00977 372 444 2.4E-26 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 SUPERFAMILY SSF82829 229 312 3.79E-25 T 12-10-2018 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Gene3D G3DSA:1.20.59.20 229 313 7.4E-29 T 12-10-2018 YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Gene3D G3DSA:3.40.50.620 8 228 6.7E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1031 474c86425f5e7a3283d27b67113ec967 451 Pfam PF09179 TilS substrate binding domain 243 310 2.6E-20 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF47413 3 60 6.38E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 315 2.1E-152 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 163 281 6.0E-68 T 12-10-2018 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF13377 Periplasmic binding protein-like domain 168 317 1.4E-15 T 12-10-2018 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.2E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:1.10.260.40 1 61 1.6E-21 T 12-10-2018 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SMART SM00354 4 74 2.8E-33 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF53822 63 316 3.34E-62 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 68 304 6.0E-68 T 12-10-2018 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0432 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 3.8E-54 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YpsIP31758_3078 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 9.8E-45 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.4E-111 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 6 283 5.0E-112 T 12-10-2018 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 SUPERFAMILY SSF52943 2 287 2.62E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:3.40.1380.10 61 206 5.0E-112 T 12-10-2018 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.354 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 Pfam PF00231 ATP synthase 5 286 9.1E-96 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-38 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-38 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-38 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4177 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-38 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 SMART SM00530 24 79 3.4E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 SUPERFAMILY SSF51306 138 235 3.84E-23 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 Pfam PF00717 Peptidase S24-like 146 221 7.0E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 Gene3D G3DSA:2.10.109.10 100 233 3.4E-39 T 12-10-2018 YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 Pfam PF01381 Helix-turn-helix 25 79 4.1E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 Gene3D G3DSA:1.10.260.40 17 83 8.3E-24 T 12-10-2018 YpsIP31758_2248 649c5f4e2a44091d053f4a0029165e1c 236 SUPERFAMILY SSF47413 17 85 3.07E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 PIRSF PIRSF004440 1 351 2.4E-67 T 12-10-2018 IPR026276 Baseplate protein GpP YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 SUPERFAMILY SSF69279 176 349 7.37E-42 T 12-10-2018 YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 Gene3D G3DSA:3.30.1920.10 199 280 2.4E-92 T 12-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 Gene3D G3DSA:3.55.50.10 91 175 2.4E-92 T 12-10-2018 YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 Pfam PF05954 Phage late control gene D protein (GPD) 26 324 9.6E-16 T 12-10-2018 YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 SUPERFAMILY SSF69279 1 175 1.36E-51 T 12-10-2018 YpsIP31758_2736 c7709e2e649f25c89c75ce4d3fdac017 351 Gene3D G3DSA:2.30.300.10 7 340 2.4E-92 T 12-10-2018 YpsIP31758_1706 c6357817bad6aa40fdfdf99f3128e828 212 Gene3D G3DSA:1.10.530.10 32 210 2.5E-45 T 12-10-2018 YpsIP31758_1706 c6357817bad6aa40fdfdf99f3128e828 212 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 67 95 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YpsIP31758_1706 c6357817bad6aa40fdfdf99f3128e828 212 SUPERFAMILY SSF53955 45 209 1.46E-29 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_1706 c6357817bad6aa40fdfdf99f3128e828 212 Pfam PF01464 Transglycosylase SLT domain 49 174 5.3E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.9E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.9E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.9E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 SMART SM00411 1 91 2.7E-41 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 SUPERFAMILY SSF47729 1 91 3.83E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.0E-29 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.373 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.5E-51 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 Gene3D G3DSA:4.10.520.10 40 94 1.3E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_2579 cd62ff6e78886be13899a872c9395e47 94 Gene3D G3DSA:4.10.520.10 2 39 2.2E-16 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_2614 7e2a9cdefa0c6381f5968d3073e7562f 555 Pfam PF11398 Protein of unknown function (DUF2813) 1 377 2.8E-158 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 YpsIP31758_2614 7e2a9cdefa0c6381f5968d3073e7562f 555 Gene3D G3DSA:3.40.50.300 1 349 2.4E-13 T 12-10-2018 YpsIP31758_2614 7e2a9cdefa0c6381f5968d3073e7562f 555 SUPERFAMILY SSF52540 1 335 1.3E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 SUPERFAMILY SSF56235 25 587 2.12E-184 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 1.7E-76 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 Gene3D G3DSA:3.60.20.40 375 579 1.3E-67 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 Gene3D G3DSA:1.10.246.130 262 374 8.9E-42 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 1.2E-181 T 12-10-2018 YpsIP31758_3128 d1b897647db03c5dd7d79932fe6d885c 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 1.3E-174 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 201 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 42 275 1.2E-65 T 12-10-2018 YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 169 197 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 SUPERFAMILY SSF51735 32 275 2.74E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 Gene3D G3DSA:3.40.50.720 14 276 1.1E-84 T 12-10-2018 YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 118 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 170 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 37 54 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2695 02b0be006b09f2b240ff2d88d0f2ce38 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 5.4E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Pfam PF13237 4Fe-4S dicluster domain 373 427 2.9E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 SUPERFAMILY SSF142019 94 303 2.22E-59 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.6E-179 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 4.0E-28 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Gene3D G3DSA:3.40.50.11540 144 283 7.5E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 698 253.018 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 SUPERFAMILY SSF46548 336 444 1.01E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.4E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Pfam PF10531 SLBB domain 296 344 8.5E-11 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1896 3eaaea4e64df21a8fa0b2016268db923 698 Gene3D G3DSA:3.30.70.20 372 446 1.9E-11 T 12-10-2018 YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 PIRSF PIRSF039085 10 265 1.2E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 SUPERFAMILY SSF52540 14 259 5.57E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 SMART SM00382 38 237 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 Pfam PF00005 ABC transporter 29 189 2.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1431 e2c71c08a045190666eaab4354f9fac7 265 Gene3D G3DSA:3.40.50.300 9 265 3.2E-82 T 12-10-2018 YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 SUPERFAMILY SSF51556 50 375 1.06E-68 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 2.9E-228 T 12-10-2018 IPR010252 Formiminoglutamate deiminase YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 Pfam PF01979 Amidohydrolase family 48 429 2.6E-30 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 Gene3D G3DSA:3.20.20.140 52 445 1.1E-182 T 12-10-2018 YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 Gene3D G3DSA:2.30.40.10 9 433 1.1E-182 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_2111 c130fd74c451c2559e5c8a67b3dbd169 456 SUPERFAMILY SSF51338 356 434 1.89E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_0888 34705bdb0271888fb8d5828b831566e1 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 6.1E-30 T 12-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 YpsIP31758_0888 34705bdb0271888fb8d5828b831566e1 100 Gene3D G3DSA:3.30.2310.40 1 100 1.9E-37 T 12-10-2018 IPR038493 Toxin MqsR superfamily YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 821 2.1E-77 T 12-10-2018 IPR009612 ImcF-related YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 SUPERFAMILY SSF52540 113 295 3.6E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1125 3.6E-58 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1174 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 Gene3D G3DSA:3.40.50.300 127 304 7.3E-7 T 12-10-2018 YpsIP31758_0326 dee64095461ffc0233cc0186953a55a1 1177 Pfam PF14331 ImcF-related N-terminal domain 203 452 1.3E-70 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 233 2.5E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF75516 13 162 1.16E-35 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF46894 174 242 2.41E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF03472 Autoinducer binding domain 13 157 2.2E-31 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 SMART SM00421 179 236 7.1E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:1.10.10.10 177 242 1.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:3.30.450.80 3 176 2.6E-49 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0720 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Gene3D G3DSA:1.10.150.570 570 622 5.4E-23 T 12-10-2018 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.4E-294 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Gene3D G3DSA:1.10.10.1800 459 550 3.2E-30 T 12-10-2018 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Gene3D G3DSA:3.50.50.60 2 245 2.5E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Gene3D G3DSA:3.50.50.60 294 458 1.1E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Pfam PF13932 GidA associated domain 403 616 1.1E-75 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 SUPERFAMILY SSF51905 6 261 9.44E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 SMART SM01228 546 617 2.8E-44 T 12-10-2018 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Pfam PF01134 Glucose inhibited division protein A 8 398 3.8E-169 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.643 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 YpsIP31758_4186 e413f96f8aa535ead8ea01d560b3f59c 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 YpsIP31758_3016 2cc97916e11ee539f0777b8eed33efab 240 SUPERFAMILY SSF56300 3 238 8.86E-36 T 12-10-2018 YpsIP31758_3016 2cc97916e11ee539f0777b8eed33efab 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 7.1E-104 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 YpsIP31758_3016 2cc97916e11ee539f0777b8eed33efab 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 6.3E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_3016 2cc97916e11ee539f0777b8eed33efab 240 Gene3D G3DSA:3.60.21.10 1 235 1.1E-19 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_3016 2cc97916e11ee539f0777b8eed33efab 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 127.465 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 YpsIP31758_2284 2120f85aea3618aae351a8445c95ed16 132 PIRSF PIRSF039090 1 132 2.1E-42 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_2284 2120f85aea3618aae351a8445c95ed16 132 Gene3D G3DSA:1.20.120.340 2 128 1.1E-41 T 12-10-2018 YpsIP31758_2284 2120f85aea3618aae351a8445c95ed16 132 Pfam PF02561 Flagellar protein FliS 8 125 1.2E-39 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_2284 2120f85aea3618aae351a8445c95ed16 132 SUPERFAMILY SSF101116 8 130 2.62E-41 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 YpsIP31758_2284 2120f85aea3618aae351a8445c95ed16 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 2.0E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_3524 e05939e1e9501292668ad66514be4b51 339 Gene3D G3DSA:3.40.50.2300 129 265 1.5E-109 T 12-10-2018 YpsIP31758_3524 e05939e1e9501292668ad66514be4b51 339 SUPERFAMILY SSF53822 26 339 1.08E-81 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3524 e05939e1e9501292668ad66514be4b51 339 Gene3D G3DSA:3.40.50.2300 29 299 1.5E-109 T 12-10-2018 YpsIP31758_3524 e05939e1e9501292668ad66514be4b51 339 Pfam PF13407 Periplasmic binding protein domain 29 284 6.7E-53 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.6E-8 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 3.1E-20 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Gene3D G3DSA:3.40.1010.10 214 330 4.2E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Gene3D G3DSA:3.30.160.110 113 148 6.7E-19 T 12-10-2018 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.1E-78 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 SUPERFAMILY SSF53790 213 456 5.37E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.369 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 SUPERFAMILY SSF75615 114 211 1.96E-28 T 12-10-2018 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Gene3D G3DSA:1.10.8.210 149 207 1.2E-15 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 PIRSF PIRSF036426 1 465 3.6E-204 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 SUPERFAMILY SSF51735 2 113 9.17E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Gene3D G3DSA:3.30.950.10 331 470 1.8E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 2.9E-48 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Pfam PF13241 Putative NAD(P)-binding 6 115 6.2E-29 T 12-10-2018 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.0E-92 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YpsIP31758_3305 d1e84aea9a0b69bd8cd3edfe60fcff77 472 Gene3D G3DSA:3.40.50.720 1 112 3.1E-32 T 12-10-2018 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 SUPERFAMILY SSF53756 6 351 2.47E-128 T 12-10-2018 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 Gene3D G3DSA:3.40.50.2000 9 161 2.4E-122 T 12-10-2018 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 1.1E-113 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 Gene3D G3DSA:3.40.50.2000 162 318 2.4E-122 T 12-10-2018 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.6E-48 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 319 4.0E-34 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 YpsIP31758_3387 f8995904fb8bc4ffec17be7655edd727 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.336 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Gene3D G3DSA:2.40.30.10 2 105 1.2E-23 T 12-10-2018 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 SUPERFAMILY SSF52343 106 227 3.14E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 206 9.6E-5 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 SUPERFAMILY SSF54292 216 319 1.31E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 7 321 85.105 T 12-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Gene3D G3DSA:3.10.20.30 225 321 7.5E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Gene3D G3DSA:3.40.50.80 106 224 2.8E-22 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 2.7E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 241 312 3.2E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 1.1E-25 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 YpsIP31758_1517 9be9bb188292bcf5b7036ca9daf69ea7 321 SUPERFAMILY SSF63380 3 104 1.29E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 57.013 T 12-10-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 SUPERFAMILY SSF46689 223 272 1.43E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 Gene3D G3DSA:1.10.10.60 166 273 3.6E-27 T 12-10-2018 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 SMART SM00342 187 270 7.5E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 SUPERFAMILY SSF51215 17 157 7.06E-14 T 12-10-2018 IPR037923 Transcription regulator HTH-like YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 SUPERFAMILY SSF46689 171 221 6.0E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 1.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 1.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 Pfam PF02311 AraC-like ligand binding domain 18 154 2.5E-25 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 Gene3D G3DSA:2.60.120.10 3 85 8.0E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3754 6366d9a9ea16f7adbae1fc9228d6b340 273 Pfam PF12833 Helix-turn-helix domain 193 271 6.7E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 6.2E-41 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 Gene3D G3DSA:2.40.50.140 2 65 3.0E-26 T 12-10-2018 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 SMART SM00357 3 67 2.1E-28 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 SUPERFAMILY SSF50249 1 66 1.2E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 PIRSF PIRSF002599 1 78 4.1E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_2609 147e3fca95c482f620fabf69995d72dd 87 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 9.5E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.8E-62 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.958 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 Pfam PF03737 Aldolase/RraA 5 152 1.2E-35 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 Gene3D G3DSA:3.50.30.40 1 161 2.4E-61 T 12-10-2018 YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 7.1E-87 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YpsIP31758_0110 2409a8f5766ea4714ead9159156f689f 161 SUPERFAMILY SSF89562 2 158 4.71E-44 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 1 82 1.11E-23 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.8E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.8E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 PIRSF PIRSF002162 1 177 2.5E-44 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 1 82 1.3E-30 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 90 164 6.6E-19 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 11 82 2.3E-19 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.759 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3899 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 83 177 9.7E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 Pfam PF03466 LysR substrate binding domain 98 288 7.0E-12 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF46785 1 87 2.72E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:3.40.190.10 99 284 1.3E-9 T 12-10-2018 YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:3.40.190.10 171 268 1.3E-9 T 12-10-2018 YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:1.10.10.10 5 95 1.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3463 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF53850 92 290 2.95E-26 T 12-10-2018 YpsIP31758_1274 7f59935637f52d9048fb3f8656fe881b 151 PIRSF PIRSF006105 5 151 2.3E-52 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YpsIP31758_1274 7f59935637f52d9048fb3f8656fe881b 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 38 144 1.1E-45 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YpsIP31758_1274 7f59935637f52d9048fb3f8656fe881b 151 Gene3D G3DSA:1.10.1130.10 64 131 9.5E-29 T 12-10-2018 YpsIP31758_1274 7f59935637f52d9048fb3f8656fe881b 151 SUPERFAMILY SSF48695 50 146 7.04E-41 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily YpsIP31758_2864 372147d5400d43f31fb791ab162779f8 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 4.9E-53 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YpsIP31758_2864 372147d5400d43f31fb791ab162779f8 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 4.6E-63 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YpsIP31758_3432 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 609 2.5E-109 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_3432 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 PIRSF PIRSF028304 2 614 1.3E-179 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_3432 4fa4f1ba3e02dbb2c8253b855d7f07d4 614 Pfam PF05947 Type VI secretion system, TssF 8 610 1.6E-137 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_2392 9751792c2ef67ad730cc6715efce5009 270 Gene3D G3DSA:1.10.472.150 16 139 7.3E-42 T 12-10-2018 YpsIP31758_2392 9751792c2ef67ad730cc6715efce5009 270 Gene3D G3DSA:3.40.390.10 140 262 8.9E-41 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 YpsIP31758_2392 9751792c2ef67ad730cc6715efce5009 270 Pfam PF06167 Glucose-regulated metallo-peptidase M90 12 243 1.3E-63 T 12-10-2018 IPR010384 MtfA family YpsIP31758_2392 9751792c2ef67ad730cc6715efce5009 270 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 68.235 T 12-10-2018 IPR010384 MtfA family YpsIP31758_2392 9751792c2ef67ad730cc6715efce5009 270 SUPERFAMILY SSF55486 34 245 1.54E-44 T 12-10-2018 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 1.3E-87 T 12-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 SUPERFAMILY SSF56784 1 222 3.67E-57 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 Gene3D G3DSA:1.10.720.60 16 99 4.5E-70 T 12-10-2018 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 5.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 5.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 5.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 5.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 40.561 T 12-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 Gene3D G3DSA:3.40.50.1000 4 206 4.5E-70 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3181 799430a979539e77892231aa11079ea3 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 196 5.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_2018 22be9c7a9fae2741bf230cf90f43673a 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 YpsIP31758_2018 22be9c7a9fae2741bf230cf90f43673a 114 Gene3D G3DSA:3.30.1330.40 1 114 5.4E-34 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_2018 22be9c7a9fae2741bf230cf90f43673a 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 1.8E-25 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 YpsIP31758_2018 22be9c7a9fae2741bf230cf90f43673a 114 SUPERFAMILY SSF55298 2 114 1.32E-26 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:2.40.50.940 222 349 2.4E-24 T 12-10-2018 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:2.40.50.140 284 340 2.4E-24 T 12-10-2018 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 SUPERFAMILY SSF52540 4 243 2.18E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 SUPERFAMILY SSF50331 237 355 2.27E-19 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 Gene3D G3DSA:3.40.50.300 4 221 2.7E-65 T 12-10-2018 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 Pfam PF00005 ABC transporter 20 161 1.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 Pfam PF08402 TOBE domain 277 348 4.9E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_1524 ae8ae05e216d98524395b2cb2128e3da 359 SMART SM00382 28 211 7.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3995 fef8e4010eb94f23ab96a5b2393d624e 109 Gene3D G3DSA:3.40.250.10 1 108 9.3E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_3995 fef8e4010eb94f23ab96a5b2393d624e 109 SUPERFAMILY SSF52821 2 101 1.83E-27 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_3995 fef8e4010eb94f23ab96a5b2393d624e 109 Pfam PF00581 Rhodanese-like domain 15 98 1.1E-14 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_3995 fef8e4010eb94f23ab96a5b2393d624e 109 SMART SM00450 7 102 5.0E-21 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_3995 fef8e4010eb94f23ab96a5b2393d624e 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.525 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 YpsIP31758_2434 606ab20f90b412c09a05259e8e184ff2 258 Gene3D G3DSA:3.20.20.70 1 258 3.6E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2434 606ab20f90b412c09a05259e8e184ff2 258 SUPERFAMILY SSF51366 1 257 4.4E-72 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_2434 606ab20f90b412c09a05259e8e184ff2 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.971 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 YpsIP31758_2434 606ab20f90b412c09a05259e8e184ff2 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.1E-114 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 YpsIP31758_2434 606ab20f90b412c09a05259e8e184ff2 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.1E-76 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 284 3.7E-91 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 SUPERFAMILY SSF51569 3 284 1.61E-86 T 12-10-2018 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 Gene3D G3DSA:3.20.20.70 1 286 9.5E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 6.4E-80 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_4026 982548f24b9612e4856db2dd77133b51 286 PIRSF PIRSF001359 1 286 3.0E-102 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_3140 96d1351cefcf1f1f255bc10e5800b6d8 304 Gene3D G3DSA:3.30.420.40 119 289 1.1E-78 T 12-10-2018 YpsIP31758_3140 96d1351cefcf1f1f255bc10e5800b6d8 304 SUPERFAMILY SSF53067 2 300 2.91E-60 T 12-10-2018 YpsIP31758_3140 96d1351cefcf1f1f255bc10e5800b6d8 304 Pfam PF00480 ROK family 3 300 3.0E-84 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_3140 96d1351cefcf1f1f255bc10e5800b6d8 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_3140 96d1351cefcf1f1f255bc10e5800b6d8 304 Gene3D G3DSA:3.30.420.40 4 296 1.1E-78 T 12-10-2018 YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 Gene3D G3DSA:1.10.3470.10 15 340 4.8E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 SUPERFAMILY SSF81345 354 667 1.7E-69 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 Gene3D G3DSA:1.10.3470.10 350 670 1.0E-76 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 SUPERFAMILY SSF81345 14 335 1.05E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 Pfam PF01032 FecCD transport family 24 333 1.1E-66 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_3331 8ada014ab5187ec1bfe5229f9db39ad3 670 Pfam PF01032 FecCD transport family 371 667 7.0E-72 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 SUPERFAMILY SSF141571 506 605 4.19E-12 T 12-10-2018 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Gene3D G3DSA:2.160.20.100 416 490 3.2E-13 T 12-10-2018 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Gene3D G3DSA:2.160.20.100 491 607 7.0E-15 T 12-10-2018 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 9 285 2.5E-30 T 12-10-2018 IPR018683 Domain of unknown function DUF2169 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 SUPERFAMILY SSF141571 424 534 3.01E-21 T 12-10-2018 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Gene3D G3DSA:2.160.20.100 608 723 1.9E-18 T 12-10-2018 YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Pfam PF13599 Pentapeptide repeats (9 copies) 637 711 2.1E-15 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Pfam PF13599 Pentapeptide repeats (9 copies) 424 494 2.7E-12 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 Pfam PF13599 Pentapeptide repeats (9 copies) 546 605 2.7E-6 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3428 5dfe604ef5df038d1288f3cd1e1010e9 739 SUPERFAMILY SSF141571 611 709 2.88E-19 T 12-10-2018 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 PIRSF PIRSF006250 17 302 2.6E-103 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 1.4E-59 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.90.1170.20 21 300 6.2E-118 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.20.20.70 139 291 6.2E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF51690 130 301 5.1E-57 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 2.8E-97 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF54675 14 129 5.49E-32 T 12-10-2018 YpsIP31758_3369 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 3.4E-26 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Gene3D G3DSA:3.30.565.10 205 353 7.6E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Gene3D G3DSA:1.10.287.130 87 197 1.7E-17 T 12-10-2018 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SMART SM00388 136 196 4.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 350 1.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SMART SM00387 242 351 4.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SUPERFAMILY SSF55874 186 349 1.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SUPERFAMILY SSF47384 121 194 7.85E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_3608 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 5.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Pfam PF00403 Heavy-metal-associated domain 73 128 6.4E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Pfam PF00403 Heavy-metal-associated domain 228 280 5.9E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Pfam PF00403 Heavy-metal-associated domain 8 61 1.9E-7 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Pfam PF00702 haloacid dehalogenase-like hydrolase 639 853 8.3E-47 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:2.70.150.20 433 545 9.3E-34 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF55008 2 66 1.23E-10 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 839 855 6.5E-7 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 870 895 6.5E-7 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 644 650 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:3.30.70.100 222 285 4.4E-19 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF81665 407 905 1.05E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 ProSitePatterns PS01047 Heavy-metal-associated domain. 226 255 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 412 916 3.0E-86 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Pfam PF00122 E1-E2 ATPase 441 621 4.5E-51 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:3.40.1110.10 653 771 1.1E-92 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF55008 70 132 1.24E-11 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF81653 443 540 1.09E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 373 948 7.6E-180 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF56784 640 945 3.25E-61 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:3.40.50.1000 623 891 1.1E-92 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 SUPERFAMILY SSF55008 221 288 9.03E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 490 504 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 862 874 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 764 775 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 786 796 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 839 858 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 656 7.0E-25 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 354 948 2.5E-185 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:3.30.70.100 71 131 1.6E-13 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 Gene3D G3DSA:3.30.70.100 6 64 2.9E-10 T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 ProSitePatterns PS01229 Hypothetical cof family signature 2. 839 861 - T 12-10-2018 YpsIP31758_3027 977a12b71d87b99847ad03b9baeca3cd 955 ProSitePatterns PS01047 Heavy-metal-associated domain. 75 104 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 Pfam PF00293 NUDIX domain 6 124 5.7E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 Gene3D G3DSA:3.90.79.10 1 128 1.4E-38 T 12-10-2018 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 SUPERFAMILY SSF55811 1 126 5.69E-39 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.6E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.6E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 77 90 1.5E-10 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 2 23 1.5E-10 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YpsIP31758_3377 7ef68f24bf10ee3b5d60bc250413e543 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-50 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YpsIP31758_2263 24f292b6fde8a99f2ecb02c2091eb23f 376 Pfam PF13473 Cupredoxin-like domain 14 116 2.0E-23 T 12-10-2018 IPR028096 EfeO-type cupredoxin-like domain YpsIP31758_2263 24f292b6fde8a99f2ecb02c2091eb23f 376 Gene3D G3DSA:2.60.40.420 20 118 3.2E-5 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_2263 24f292b6fde8a99f2ecb02c2091eb23f 376 SUPERFAMILY SSF49503 18 116 1.4E-6 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_2263 24f292b6fde8a99f2ecb02c2091eb23f 376 Gene3D G3DSA:1.20.1420.20 129 376 2.8E-99 T 12-10-2018 IPR038352 Imelysin-like domain superfamily YpsIP31758_2263 24f292b6fde8a99f2ecb02c2091eb23f 376 Pfam PF09375 Imelysin 137 369 9.0E-45 T 12-10-2018 IPR018976 Imelysin-like domain YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Gene3D G3DSA:3.40.50.300 283 551 2.6E-63 T 12-10-2018 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Pfam PF12848 ABC transporter 224 298 1.7E-9 T 12-10-2018 IPR032781 ABC-transporter extension domain YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Pfam PF00005 ABC transporter 336 469 3.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 SMART SM00382 28 230 8.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 SMART SM00382 344 514 1.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 SUPERFAMILY SSF52540 311 501 2.33E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 SUPERFAMILY SSF52540 4 244 1.52E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Gene3D G3DSA:1.10.287.380 556 637 6.6E-29 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Gene3D G3DSA:3.40.50.300 11 279 1.7E-65 T 12-10-2018 YpsIP31758_2551 05851c56305419be8b532120c261cd6a 637 Pfam PF16326 ABC transporter C-terminal domain 564 632 5.7E-20 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 YpsIP31758_3404 396d02c88351f2dd523a37081c3543a6 27 Pfam PF08054 Leucine operon leader peptide 6 26 1.5E-6 T 12-10-2018 IPR012570 Leucine operon leader peptide GO:0009098 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.403 T 12-10-2018 IPR022973 Ribosomal protein L10 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 SUPERFAMILY SSF160369 4 162 4.71E-48 T 12-10-2018 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 Gene3D G3DSA:3.30.70.1730 1 126 4.2E-35 T 12-10-2018 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 6.0E-4 T 12-10-2018 YpsIP31758_3862 3122d49df73954aa91c8d607ffb1baa0 165 Pfam PF00466 Ribosomal protein L10 6 101 1.6E-25 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 Gene3D G3DSA:1.10.520.20 2 106 6.4E-38 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.9E-50 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.5E-63 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.934 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4179 a4a4c50db4c1f86c245e8cc3e015f003 177 SUPERFAMILY SSF47928 3 104 1.44E-27 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 SMART SM00382 33 222 7.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 SMART SM00382 287 483 8.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 SUPERFAMILY SSF52540 251 489 1.07E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 SUPERFAMILY SSF52540 8 231 1.57E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 Gene3D G3DSA:3.40.50.300 1 234 3.3E-57 T 12-10-2018 YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 Gene3D G3DSA:3.40.50.300 254 503 2.5E-44 T 12-10-2018 YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 Pfam PF00005 ABC transporter 279 434 2.5E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3251 d6782e47c8e162584c169e2b9db2183b 507 Pfam PF00005 ABC transporter 24 174 1.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3443 de3cd34acf8dda014ffd851e6c33367b 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 4.6E-129 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 YpsIP31758_3443 de3cd34acf8dda014ffd851e6c33367b 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 2.7E-107 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 YpsIP31758_3443 de3cd34acf8dda014ffd851e6c33367b 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 329 36.399 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 YpsIP31758_3443 de3cd34acf8dda014ffd851e6c33367b 331 SUPERFAMILY SSF53659 7 328 1.12E-112 T 12-10-2018 YpsIP31758_3443 de3cd34acf8dda014ffd851e6c33367b 331 Gene3D G3DSA:3.40.718.10 1 331 1.7E-135 T 12-10-2018 YpsIP31758_1071 27f12eaac09e1227b64e644a5685fd63 525 PIRSF PIRSF002741 30 517 1.8E-74 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_1071 27f12eaac09e1227b64e644a5685fd63 525 Gene3D G3DSA:3.40.190.10 42 508 8.9E-182 T 12-10-2018 YpsIP31758_1071 27f12eaac09e1227b64e644a5685fd63 525 Gene3D G3DSA:3.10.105.10 250 496 8.9E-182 T 12-10-2018 YpsIP31758_1071 27f12eaac09e1227b64e644a5685fd63 525 SUPERFAMILY SSF53850 29 505 9.41E-97 T 12-10-2018 YpsIP31758_1071 27f12eaac09e1227b64e644a5685fd63 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 427 5.9E-81 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_1600 a1d5b611326bef9b9bd2e64e4bf4560e 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 5.2E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain YpsIP31758_1600 a1d5b611326bef9b9bd2e64e4bf4560e 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 5.5E-139 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YpsIP31758_1600 a1d5b611326bef9b9bd2e64e4bf4560e 400 Pfam PF02687 FtsX-like permease family 297 393 5.4E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 SUPERFAMILY SSF53850 41 275 1.54E-47 T 12-10-2018 YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 Gene3D G3DSA:3.40.190.10 45 319 2.5E-114 T 12-10-2018 YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 45 324 8.1E-83 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 Pfam PF09084 NMT1/THI5 like 82 198 4.4E-11 T 12-10-2018 IPR015168 SsuA/THI5-like YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 SMART SM00062 43 264 1.6E-24 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 Gene3D G3DSA:3.40.190.10 122 221 2.5E-114 T 12-10-2018 YpsIP31758_0353 127e53d6d8d7c5df8452f80c1d29f3e5 373 Gene3D G3DSA:1.10.8.450 253 286 2.5E-114 T 12-10-2018 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 PIRSF PIRSF005902 1 260 2.4E-71 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 63.118 T 12-10-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 Gene3D G3DSA:3.20.20.140 1 260 3.7E-94 T 12-10-2018 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 SUPERFAMILY SSF51556 1 259 7.03E-80 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_0277 7084f3b7005ba92b0cf44bf94499c79e 260 Pfam PF01026 TatD related DNase 2 257 1.2E-64 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF54534 81 157 1.28E-24 T 12-10-2018 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.737 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 7.5E-32 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.7E-60 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:3.10.50.30 76 158 5.4E-33 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:1.10.287.180 1 75 5.4E-33 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 9.8E-29 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 PIRSF PIRSF006092 1 158 1.9E-55 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YpsIP31758_3605 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF46557 3 78 4.05E-29 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 Gene3D G3DSA:2.150.10.10 14 140 4.5E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 SUPERFAMILY SSF54523 274 361 2.51E-17 T 12-10-2018 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 Gene3D G3DSA:3.30.1300.30 264 362 5.2E-19 T 12-10-2018 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 240 255 1.9E-6 T 12-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 267 283 1.9E-6 T 12-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 75 95 1.9E-6 T 12-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 173 191 1.9E-6 T 12-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 Pfam PF03895 YadA-like membrane anchor domain 313 361 2.0E-7 T 12-10-2018 IPR005594 YadA-like, C-terminal YpsIP31758_2585 f9ef027d8999afdf86d75026220d4689 364 SUPERFAMILY SSF101967 27 136 6.8E-10 T 12-10-2018 YpsIP31758_0857 2a22188b1de9f97ca68ae2f98fe16467 198 SUPERFAMILY SSF100950 10 198 9.07E-59 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_0857 2a22188b1de9f97ca68ae2f98fe16467 198 PIRSF PIRSF006806 7 195 5.2E-42 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YpsIP31758_0857 2a22188b1de9f97ca68ae2f98fe16467 198 Gene3D G3DSA:3.40.50.10420 3 197 2.8E-59 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YpsIP31758_0857 2a22188b1de9f97ca68ae2f98fe16467 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 6.5E-57 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YpsIP31758_0857 2a22188b1de9f97ca68ae2f98fe16467 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 192 2.1E-52 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YpsIP31758_2710 86bf027407e470d64bef10768a9b4ad4 526 Pfam PF00563 EAL domain 272 505 4.4E-65 T 12-10-2018 IPR001633 EAL domain YpsIP31758_2710 86bf027407e470d64bef10768a9b4ad4 526 Gene3D G3DSA:3.20.20.450 265 523 2.0E-75 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_2710 86bf027407e470d64bef10768a9b4ad4 526 SMART SM00052 265 510 2.4E-83 T 12-10-2018 IPR001633 EAL domain YpsIP31758_2710 86bf027407e470d64bef10768a9b4ad4 526 Pfam PF12792 CSS motif domain associated with EAL 46 233 1.1E-32 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YpsIP31758_2710 86bf027407e470d64bef10768a9b4ad4 526 SUPERFAMILY SSF141868 271 518 6.54E-72 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 PRINTS PR01100 Shikimate kinase family signature 100 117 2.0E-5 T 12-10-2018 YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 PRINTS PR01100 Shikimate kinase family signature 6 21 2.0E-5 T 12-10-2018 YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 SUPERFAMILY SSF52540 3 165 9.87E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 Pfam PF01202 Shikimate kinase 12 165 3.4E-14 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 Gene3D G3DSA:3.40.50.300 2 167 1.9E-67 T 12-10-2018 YpsIP31758_4020 b45b525184322e6efcac84a0fcb78298 167 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 163 2.9E-65 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 Pfam PF09383 NIL domain 255 326 1.9E-13 T 12-10-2018 IPR018449 NIL domain YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 SMART SM00382 30 226 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 Pfam PF00005 ABC transporter 21 169 1.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.30.70.260 247 328 1.1E-6 T 12-10-2018 YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.40.50.300 1 238 1.8E-72 T 12-10-2018 YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF52540 1 236 2.1E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 SMART SM00930 251 328 2.2E-10 T 12-10-2018 IPR018449 NIL domain YpsIP31758_2661 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF55021 253 327 2.86E-10 T 12-10-2018 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 96 129 2.0E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 62 95 0.0033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 SUPERFAMILY SSF48452 27 283 9.36E-75 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 Gene3D G3DSA:1.25.40.10 20 294 2.9E-117 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3591 cd9ae0fa8be8e53c473bfe648b2f363e 294 PIRSF PIRSF004654 1 292 1.6E-116 T 12-10-2018 IPR023605 Lipoprotein NlpI YpsIP31758_0256 fdc4afc79348071389a425628a8cd6f3 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 YpsIP31758_0256 fdc4afc79348071389a425628a8cd6f3 439 Gene3D G3DSA:3.40.190.10 31 385 1.6E-165 T 12-10-2018 YpsIP31758_0256 fdc4afc79348071389a425628a8cd6f3 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 359 2.1E-41 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_0256 fdc4afc79348071389a425628a8cd6f3 439 SUPERFAMILY SSF53850 27 426 1.14E-73 T 12-10-2018 YpsIP31758_0256 fdc4afc79348071389a425628a8cd6f3 439 Gene3D G3DSA:3.40.190.10 147 425 1.6E-165 T 12-10-2018 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.609 T 12-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:3.40.50.300 19 186 2.1E-5 T 12-10-2018 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.10.10.10 828 900 5.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF52540 7 225 9.69E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF46894 829 895 1.29E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 1.4E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.25.40.10 439 811 1.6E-94 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF48452 442 806 8.94E-158 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3994 9e033452c91f32f23d3db58bcefb3c71 903 SMART SM00421 836 893 6.4E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 1.8E-30 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 9.5E-84 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 PIRSF PIRSF001394 30 547 3.5E-231 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.6E-62 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 Gene3D G3DSA:3.20.130.10 347 537 1.2E-58 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 Pfam PF05683 Fumarase C-terminus 332 537 5.6E-94 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YpsIP31758_3271 9277480cadfa258516e2d52c3b61660e 547 SUPERFAMILY SSF117457 361 536 3.79E-63 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 YpsIP31758_3571 241751e87d874da801f732ae29d67c6a 388 Pfam PF05426 Alginate lyase 56 335 1.1E-76 T 12-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YpsIP31758_3571 241751e87d874da801f732ae29d67c6a 388 Gene3D G3DSA:1.50.10.100 11 388 1.1E-119 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_3571 241751e87d874da801f732ae29d67c6a 388 SUPERFAMILY SSF48230 63 338 2.84E-56 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_0669 b7f8e62323edb1b1c18e70be39848916 150 Pfam PF14568 SMI1-KNR4 cell-wall 15 142 3.3E-24 T 12-10-2018 YpsIP31758_0669 b7f8e62323edb1b1c18e70be39848916 150 SUPERFAMILY SSF160631 6 147 9.55E-27 T 12-10-2018 YpsIP31758_0669 b7f8e62323edb1b1c18e70be39848916 150 Gene3D G3DSA:3.40.1580.10 3 149 9.9E-29 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily YpsIP31758_0669 b7f8e62323edb1b1c18e70be39848916 150 SMART SM00860 10 144 1.6E-14 T 12-10-2018 IPR018958 Knr4/Smi1-like domain YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 SMART SM00062 40 263 4.1E-64 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 SUPERFAMILY SSF53850 12 262 2.99E-66 T 12-10-2018 YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 7.6E-58 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 Gene3D G3DSA:3.40.190.10 128 221 1.5E-63 T 12-10-2018 YpsIP31758_4165 c7359d868956f2b3d3ff082dc969bf14 284 Gene3D G3DSA:3.40.190.10 32 256 1.5E-63 T 12-10-2018 YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 Gene3D G3DSA:3.40.225.10 25 232 1.2E-53 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 446 681 2.0E-41 T 12-10-2018 YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 SUPERFAMILY SSF51735 435 685 1.25E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 573 601 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 SUPERFAMILY SSF53639 26 228 1.79E-33 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 Gene3D G3DSA:3.40.50.720 419 686 4.7E-56 T 12-10-2018 YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 607 624 6.8E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 512 523 6.8E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 586 605 6.8E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 441 458 6.8E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 SMART SM01007 28 227 2.2E-31 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_2311 b1329b636f7b8c9907e4dfcfb4d409dd 688 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 224 1.9E-23 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 188.755 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 Gene3D G3DSA:3.40.50.300 9 316 1.4E-94 T 12-10-2018 YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 PIRSF PIRSF000545 1 316 6.2E-148 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 SUPERFAMILY SSF52540 10 315 1.49E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 9.0E-170 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 YpsIP31758_3870 1a5cbc0702113c26a2f389f0a9bd97bb 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 5.8E-16 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 YpsIP31758_2414 4a4ce94d0fbfb6c1a1789d5f184b3e22 434 Pfam PF07690 Major Facilitator Superfamily 27 388 1.2E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2414 4a4ce94d0fbfb6c1a1789d5f184b3e22 434 Gene3D G3DSA:1.20.1250.20 12 218 9.6E-38 T 12-10-2018 YpsIP31758_2414 4a4ce94d0fbfb6c1a1789d5f184b3e22 434 Gene3D G3DSA:1.20.1250.20 233 427 3.9E-17 T 12-10-2018 YpsIP31758_2414 4a4ce94d0fbfb6c1a1789d5f184b3e22 434 SUPERFAMILY SSF103473 6 430 1.18E-68 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 Gene3D G3DSA:1.10.443.10 204 391 1.1E-13 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 Pfam PF00589 Phage integrase family 207 382 4.6E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 Pfam PF13356 Arm DNA-binding domain 3 87 2.2E-20 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 Gene3D G3DSA:1.10.150.130 90 201 5.1E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 SUPERFAMILY SSF56349 97 385 6.83E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0809 941eadad246b45dd821654b934e3eafe 419 Gene3D G3DSA:3.30.160.390 1 88 6.7E-34 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_1027 1a7349ff74bd00cf878cfe39953ef0cb 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.211 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 YpsIP31758_1027 1a7349ff74bd00cf878cfe39953ef0cb 198 SUPERFAMILY SSF53098 5 196 5.01E-69 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_1027 1a7349ff74bd00cf878cfe39953ef0cb 198 Gene3D G3DSA:3.30.420.10 1 197 8.3E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_1027 1a7349ff74bd00cf878cfe39953ef0cb 198 Pfam PF01351 Ribonuclease HII 14 189 1.2E-38 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain YpsIP31758_1810 7b044ad2d2377574f87c07ae70c5709e 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 18 64 8.0E-21 T 12-10-2018 YpsIP31758_1810 7b044ad2d2377574f87c07ae70c5709e 64 Pfam PF13617 YnbE-like lipoprotein 10 62 1.5E-25 T 12-10-2018 IPR025985 YnbE-like lipoprotein YpsIP31758_2262 59bd9ac0ca611ffb57588a143f6b67fb 434 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 73 421 5.7E-100 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 YpsIP31758_2262 59bd9ac0ca611ffb57588a143f6b67fb 434 Pfam PF04261 Dyp-type peroxidase family 73 421 1.2E-110 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 YpsIP31758_2262 59bd9ac0ca611ffb57588a143f6b67fb 434 SUPERFAMILY SSF54909 66 427 5.01E-98 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_2262 59bd9ac0ca611ffb57588a143f6b67fb 434 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 18 433 3.2E-168 T 12-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 1 152 2.15E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 390 440 1.44E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 232 376 5.43E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 390 451 3.2E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 156 225 6.1E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 233 366 4.1E-36 T 12-10-2018 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-22 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 2 139 1.8E-49 T 12-10-2018 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 235 350 9.0E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YpsIP31758_3885 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 3 124 1.2E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YpsIP31758_2981 5ea3e45bd0811a8b5c935e0de8ef0b47 81 SUPERFAMILY SSF47413 3 70 1.74E-28 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_2981 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Gene3D G3DSA:1.10.260.40 1 69 3.3E-32 T 12-10-2018 YpsIP31758_2981 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 75 1.9E-33 T 12-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YpsIP31758_3095 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 3.7E-5 T 12-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site YpsIP31758_3095 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 4.6E-54 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG YpsIP31758_1604 96f0bb969551bb0270ce828b98e20430 278 SUPERFAMILY SSF52467 41 267 9.2E-75 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_1604 96f0bb969551bb0270ce828b98e20430 278 Pfam PF02146 Sir2 family 46 219 9.0E-52 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 YpsIP31758_1604 96f0bb969551bb0270ce828b98e20430 278 Gene3D G3DSA:3.40.50.1220 41 261 2.8E-82 T 12-10-2018 YpsIP31758_1604 96f0bb969551bb0270ce828b98e20430 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 58.882 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 YpsIP31758_1604 96f0bb969551bb0270ce828b98e20430 278 Gene3D G3DSA:3.30.1600.10 55 191 2.8E-82 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily YpsIP31758_0364 28ca3b1bff66278ec47d56b88c6ca904 329 Gene3D G3DSA:3.40.50.2300 131 268 4.2E-92 T 12-10-2018 YpsIP31758_0364 28ca3b1bff66278ec47d56b88c6ca904 329 SUPERFAMILY SSF53822 28 327 7.61E-65 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0364 28ca3b1bff66278ec47d56b88c6ca904 329 Gene3D G3DSA:3.40.50.2300 32 301 4.2E-92 T 12-10-2018 YpsIP31758_0364 28ca3b1bff66278ec47d56b88c6ca904 329 Pfam PF13407 Periplasmic binding protein domain 32 289 2.9E-53 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_3215 6d3b1670648edf151bb2419bd7b8bd10 243 Pfam PF13525 Outer membrane lipoprotein 28 236 2.3E-84 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like YpsIP31758_3215 6d3b1670648edf151bb2419bd7b8bd10 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 1.2E-88 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD YpsIP31758_3215 6d3b1670648edf151bb2419bd7b8bd10 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.778 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD YpsIP31758_3215 6d3b1670648edf151bb2419bd7b8bd10 243 SUPERFAMILY SSF48452 27 119 1.23E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3215 6d3b1670648edf151bb2419bd7b8bd10 243 Gene3D G3DSA:1.25.40.10 29 243 3.1E-62 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 SUPERFAMILY SSF51735 418 547 1.14E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 Gene3D G3DSA:3.40.50.720 416 552 7.1E-27 T 12-10-2018 YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 9.0E-81 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 Gene3D G3DSA:1.20.1530.20 6 397 1.1E-78 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 Pfam PF02254 TrkA-N domain 420 534 6.9E-21 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YpsIP31758_3034 4a4eea3e99b2013dd2959d75ae66d67e 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 2.3E-79 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YpsIP31758_2631 4d45e1f21c2dbd037ddbe0c750a1e6e5 442 Pfam PF10100 Staphylopine dehydrogenase 7 438 2.3E-181 T 12-10-2018 IPR016935 Staphylopine dehydrogenase YpsIP31758_2631 4d45e1f21c2dbd037ddbe0c750a1e6e5 442 Gene3D G3DSA:3.40.50.720 4 182 1.2E-9 T 12-10-2018 YpsIP31758_2631 4d45e1f21c2dbd037ddbe0c750a1e6e5 442 SUPERFAMILY SSF51735 8 144 4.73E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2631 4d45e1f21c2dbd037ddbe0c750a1e6e5 442 PIRSF PIRSF029692 2 442 6.2E-206 T 12-10-2018 IPR016935 Staphylopine dehydrogenase YpsIP31758_3094 a197bee84ce1f7652d5eabca07c765b2 106 PIRSF PIRSF003113 1 101 8.2E-33 T 12-10-2018 IPR002634 BolA protein YpsIP31758_3094 a197bee84ce1f7652d5eabca07c765b2 106 Gene3D G3DSA:3.30.300.90 2 91 3.8E-35 T 12-10-2018 YpsIP31758_3094 a197bee84ce1f7652d5eabca07c765b2 106 SUPERFAMILY SSF82657 3 90 3.01E-29 T 12-10-2018 IPR036065 BolA-like superfamily YpsIP31758_3094 a197bee84ce1f7652d5eabca07c765b2 106 Pfam PF01722 BolA-like protein 12 85 4.6E-29 T 12-10-2018 IPR002634 BolA protein YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 PIRSF PIRSF002181 1 142 1.3E-50 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.544 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.2E-67 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 SUPERFAMILY SSF52161 1 140 2.35E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 Gene3D G3DSA:3.90.1180.10 1 142 1.3E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0459 5d73bf0d848d5778405ad66e5a089275 142 Pfam PF00572 Ribosomal protein L13 15 138 8.5E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 SUPERFAMILY SSF51230 79 154 8.77E-27 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 Pfam PF00364 Biotin-requiring enzyme 82 153 6.9E-25 T 12-10-2018 IPR000089 Biotin/lipoyl attachment YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.4E-65 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 YpsIP31758_0392 bd9177e1c2e94c0b3506ae1d3fbeeccf 154 Gene3D G3DSA:2.40.50.100 75 154 1.4E-31 T 12-10-2018 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.9E-63 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 PIRSF PIRSF001220 1 334 4.0E-99 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 SMART SM00870 5 323 8.5E-138 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 SUPERFAMILY SSF53774 3 335 6.41E-111 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 PIRSF PIRSF500176 2 332 5.4E-113 T 12-10-2018 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 Gene3D G3DSA:3.40.50.40 209 338 1.1E-48 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.0E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.0E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.0E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 8.1E-128 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 YpsIP31758_1983 a85bdcaf8eae7801f82001f3dad05d7e 338 Gene3D G3DSA:3.40.50.1170 1 208 2.6E-92 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 YpsIP31758_0356 37a993f1f5a2f61cfdb9d5fa0839e028 271 Gene3D G3DSA:3.40.50.300 4 216 1.5E-60 T 12-10-2018 YpsIP31758_0356 37a993f1f5a2f61cfdb9d5fa0839e028 271 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0356 37a993f1f5a2f61cfdb9d5fa0839e028 271 SUPERFAMILY SSF52540 13 213 3.29E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0356 37a993f1f5a2f61cfdb9d5fa0839e028 271 SMART SM00382 37 211 2.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0356 37a993f1f5a2f61cfdb9d5fa0839e028 271 Pfam PF00005 ABC transporter 28 161 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 Gene3D G3DSA:3.40.50.720 6 330 2.3E-127 T 12-10-2018 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 SUPERFAMILY SSF51735 2 182 2.82E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 3.4E-14 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 Gene3D G3DSA:3.30.360.10 153 312 2.3E-127 T 12-10-2018 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.4E-127 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.922 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 SUPERFAMILY SSF55347 154 308 3.18E-49 T 12-10-2018 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 SMART SM00859 3 146 1.6E-53 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0127 890d821dbc300796fe9cb5e6d9bf184b 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.6E-33 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00270 DEAD/DEAH box helicase 32 196 4.4E-51 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF12343 Cold shock protein DEAD box A 591 664 1.3E-22 T 12-10-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00271 Helicase conserved C-terminal domain 234 342 8.7E-29 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 574 46.583 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 2 213 5.4E-77 T 12-10-2018 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.30.70.330 500 573 3.2E-9 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00490 261 342 1.5E-31 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 148 356 2.34E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF03880 DbpA RNA binding domain 503 572 1.9E-19 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 5 210 2.48E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 216 435 4.1E-50 T 12-10-2018 YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00487 26 224 3.2E-64 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_3590 975c2c37a0e563c78469f3b6ec907661 664 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YpsIP31758_0906 0059e4ef63db7d06c6bb90f6b4d610fe 285 SUPERFAMILY SSF54001 58 232 5.89E-28 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_0906 0059e4ef63db7d06c6bb90f6b4d610fe 285 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 59 151 5.9E-9 T 12-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YpsIP31758_0906 0059e4ef63db7d06c6bb90f6b4d610fe 285 Gene3D G3DSA:3.90.1720.10 53 235 7.2E-11 T 12-10-2018 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 SUPERFAMILY SSF88659 158 230 1.38E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 Pfam PF04539 Sigma-70 region 3 100 142 1.1E-7 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 Gene3D G3DSA:1.20.140.160 90 231 1.7E-34 T 12-10-2018 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 Gene3D G3DSA:1.10.1740.10 10 88 7.3E-17 T 12-10-2018 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 SUPERFAMILY SSF88946 19 91 1.7E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 229 7.4E-65 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 229 2.4E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 Pfam PF04545 Sigma-70, region 4 180 228 8.1E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 PRINTS PR00046 Major sigma-70 factor signature 201 216 4.5E-7 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 PRINTS PR00046 Major sigma-70 factor signature 184 196 4.5E-7 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 PRINTS PR00046 Major sigma-70 factor signature 216 227 4.5E-7 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 PRINTS PR00046 Major sigma-70 factor signature 47 60 4.5E-7 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 Pfam PF04542 Sigma-70 region 2 22 92 7.7E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_0660 1fb51afc323299b84b497dbb075c835c 231 SUPERFAMILY SSF88659 93 154 9.16E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 3.0E-31 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 113.279 T 12-10-2018 IPR008135 Competence-induced protein CinA YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 SMART SM00852 5 172 1.0E-32 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.5E-31 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 Gene3D G3DSA:3.40.980.10 1 172 4.9E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 1.2E-116 T 12-10-2018 IPR008135 Competence-induced protein CinA YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 SUPERFAMILY SSF53218 1 203 5.89E-37 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_2773 b3e8a674b791478a5eed7957bf6c572d 397 PIRSF PIRSF006728 1 385 6.7E-113 T 12-10-2018 IPR008135 Competence-induced protein CinA YpsIP31758_0255 9210c6b6ba48cfc4ca102232ed011dee 174 Pfam PF04449 CS1 type fimbrial major subunit 36 171 6.9E-35 T 12-10-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 YpsIP31758_0255 9210c6b6ba48cfc4ca102232ed011dee 174 Gene3D G3DSA:2.60.40.2040 48 174 2.2E-7 T 12-10-2018 YpsIP31758_0543 31f7a69b39f6c2d1b79baf69d94de198 134 Gene3D G3DSA:3.30.1330.40 2 134 1.0E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0543 31f7a69b39f6c2d1b79baf69d94de198 134 SUPERFAMILY SSF55298 4 133 4.87E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0543 31f7a69b39f6c2d1b79baf69d94de198 134 Pfam PF01042 Endoribonuclease L-PSP 18 132 1.3E-21 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 YpsIP31758_1857 98d441d40675b60dfd9c19a3a9ab831d 392 Gene3D G3DSA:3.90.1150.10 14 385 2.7E-133 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1857 98d441d40675b60dfd9c19a3a9ab831d 392 Gene3D G3DSA:3.40.640.10 71 295 2.7E-133 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1857 98d441d40675b60dfd9c19a3a9ab831d 392 Pfam PF00155 Aminotransferase class I and II 46 386 9.6E-42 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1857 98d441d40675b60dfd9c19a3a9ab831d 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 389 3.3E-127 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 YpsIP31758_1857 98d441d40675b60dfd9c19a3a9ab831d 392 SUPERFAMILY SSF53383 5 390 2.24E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1472 a39100feefefd92307ce18683da23788 427 SUPERFAMILY SSF51445 70 364 6.38E-32 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_1472 a39100feefefd92307ce18683da23788 427 Pfam PF02638 Glycosyl hydrolase-like 10 43 377 1.3E-101 T 12-10-2018 IPR003790 Glycosyl hydrolase-like 10 YpsIP31758_1472 a39100feefefd92307ce18683da23788 427 Gene3D G3DSA:3.20.20.70 125 349 1.8E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1942 7ebbf9a1e865175791d1bcd23feff099 256 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 22.426 T 12-10-2018 IPR009627 Uncharacterised protein family UPF0259 YpsIP31758_1942 7ebbf9a1e865175791d1bcd23feff099 256 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 1.6E-101 T 12-10-2018 IPR009627 Uncharacterised protein family UPF0259 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF02080 TrkA-C domain 425 483 5.9E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Gene3D G3DSA:3.30.70.1450 408 484 3.1E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Gene3D G3DSA:1.20.1530.20 7 391 1.1E-17 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.934 T 12-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Gene3D G3DSA:3.30.465.10 486 570 2.4E-11 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 SMART SM01091 492 572 1.2E-20 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 6.1E-59 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 SUPERFAMILY SSF116726 420 483 1.14E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 Pfam PF03471 Transporter associated domain 493 571 2.8E-14 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_1549 3b4ad80866e2c21fd2d99ec27131c3e8 575 SUPERFAMILY SSF56176 497 570 6.82E-13 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 6.8E-120 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 4.6E-218 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_3282 a708933d8ef77d1c8b9c034c9c324b70 429 Pfam PF02040 Arsenical pump membrane protein 4 423 1.1E-161 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 SUPERFAMILY SSF53955 154 356 8.73E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 Pfam PF01464 Transglycosylase SLT domain 195 316 1.1E-32 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 Gene3D G3DSA:1.10.530.10 177 354 4.5E-49 T 12-10-2018 YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 1.7E-77 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal YpsIP31758_0817 fac182713896752e77c602038a14e44f 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.613 T 12-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 YpsIP31758_0839 6b0ee1f37217aaedf18f6a7e612ac122 235 Pfam PF04231 Endonuclease I 44 229 1.9E-42 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 YpsIP31758_0839 6b0ee1f37217aaedf18f6a7e612ac122 235 SUPERFAMILY SSF54060 25 230 1.29E-86 T 12-10-2018 YpsIP31758_1674 59c96ed54f68a2d0c5f2b64266702dc0 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.994 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 YpsIP31758_1674 59c96ed54f68a2d0c5f2b64266702dc0 293 Gene3D G3DSA:3.30.2010.10 64 157 3.9E-36 T 12-10-2018 YpsIP31758_1674 59c96ed54f68a2d0c5f2b64266702dc0 293 Pfam PF01435 Peptidase family M48 74 288 5.7E-38 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.0E-261 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.50.50.60 248 400 1.0E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 4.1E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF51971 145 401 1.06E-68 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.5E-37 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.5E-37 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.5E-37 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.5E-37 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.5E-37 T 12-10-2018 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.50.50.60 147 205 2.1E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.3E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 YpsIP31758_0465 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:1.10.1060.10 13 146 6.8E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_3612 f8b2654b453bfc8156e546f6a043ecf7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3612 f8b2654b453bfc8156e546f6a043ecf7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.14 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3612 f8b2654b453bfc8156e546f6a043ecf7 103 SUPERFAMILY SSF141091 1 102 3.4E-38 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3612 f8b2654b453bfc8156e546f6a043ecf7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-44 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3612 f8b2654b453bfc8156e546f6a043ecf7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-39 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 Pfam PF01595 Domain of unknown function DUF21 3 176 1.1E-51 T 12-10-2018 IPR002550 CNNM, transmembrane domain YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 Pfam PF03471 Transporter associated domain 336 409 2.9E-17 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 Gene3D G3DSA:3.10.580.10 193 322 3.7E-43 T 12-10-2018 YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 Pfam PF00571 CBS domain 270 318 0.0023 T 12-10-2018 IPR000644 CBS domain YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 SUPERFAMILY SSF56176 332 415 8.18E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 Gene3D G3DSA:3.30.465.10 332 410 9.4E-25 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 SMART SM01091 334 411 3.4E-23 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_3232 698529d6ad23b16f7bfcf6a2176fcc9e 418 SUPERFAMILY SSF54631 184 321 9.73E-23 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 SUPERFAMILY SSF69304 541 758 3.79E-6 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Gene3D G3DSA:3.90.930.1 488 655 1.0E-9 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Gene3D G3DSA:3.90.930.1 656 803 5.4E-12 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Pfam PF03527 RHS protein 1181 1216 2.1E-15 T 12-10-2018 IPR001826 RHS protein YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 537 577 3.2E-10 T 12-10-2018 IPR006530 YD repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 645 682 1.2E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 687 717 3.9E-5 T 12-10-2018 IPR006530 YD repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 729 757 1.2E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 592 621 1.5E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Pfam PF05488 PAAR motif 89 153 1.5E-16 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Gene3D G3DSA:2.180.10.10 985 1293 4.8E-43 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Gene3D G3DSA:2.60.200.60 75 163 2.8E-17 T 12-10-2018 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1207 1293 3.9E-27 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Pfam PF05593 RHS Repeat 729 764 6.2E-6 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_3692 b14913bd6b2c440bfd5bece5bc3aae5f 1419 Pfam PF05593 RHS Repeat 648 675 5.1E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_3397 c63204b4e7b1f7feba1a889b5702f39f 146 Pfam PF06610 L-alanine exporter 6 142 7.1E-72 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YpsIP31758_3397 c63204b4e7b1f7feba1a889b5702f39f 146 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 4.0E-61 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YpsIP31758_3397 c63204b4e7b1f7feba1a889b5702f39f 146 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 36.208 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SUPERFAMILY SSF54106 482 525 3.27E-10 T 12-10-2018 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SUPERFAMILY SSF53187 197 421 3.14E-52 T 12-10-2018 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Gene3D G3DSA:3.40.630.40 185 428 5.5E-70 T 12-10-2018 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SMART SM00646 259 418 6.7E-73 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SMART SM00257 548 591 2.7E-16 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SMART SM00257 482 525 3.4E-12 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Pfam PF11741 AMIN domain 27 119 1.7E-7 T 12-10-2018 IPR021731 AMIN domain YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 199 418 1.2E-48 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Gene3D G3DSA:3.10.350.10 532 593 9.7E-17 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Gene3D G3DSA:2.60.40.3500 15 125 1.6E-13 T 12-10-2018 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 SUPERFAMILY SSF54106 548 591 6.15E-11 T 12-10-2018 YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Pfam PF01476 LysM domain 483 525 5.8E-11 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Pfam PF01476 LysM domain 549 591 9.7E-14 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3656 e77e592291d858ba89c2ce411c53e663 593 Gene3D G3DSA:3.10.350.10 478 531 1.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 Pfam PF00293 NUDIX domain 4 120 4.2E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 Gene3D G3DSA:3.90.79.10 1 128 4.3E-36 T 12-10-2018 YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 SUPERFAMILY SSF55811 3 124 3.38E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_1977 20b52da652f96112cd05929ed2250354 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-46 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 17 107 1.3E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3909 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 8.9E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.1700.10 129 306 1.3E-75 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.9E-108 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 134 278 1.44E-54 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 3 124 1.06E-41 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.230.20 1 128 5.3E-52 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.027 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YpsIP31758_3381 03c3fa9d1b52ad5ba66ba21ea20291d6 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 5.3E-159 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YpsIP31758_4066 05d74d1cf2321ac67797ce71a57c0527 572 PIRSF PIRSF001432 1 565 2.6E-279 T 12-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YpsIP31758_4066 05d74d1cf2321ac67797ce71a57c0527 572 Gene3D G3DSA:2.30.30.880 69 562 0.0 T 12-10-2018 YpsIP31758_4066 05d74d1cf2321ac67797ce71a57c0527 572 Pfam PF06917 Periplasmic pectate lyase 18 572 0.0 T 12-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YpsIP31758_4066 05d74d1cf2321ac67797ce71a57c0527 572 Gene3D G3DSA:1.50.10.20 27 527 0.0 T 12-10-2018 YpsIP31758_4066 05d74d1cf2321ac67797ce71a57c0527 572 Gene3D G3DSA:2.20.25.430 281 397 0.0 T 12-10-2018 YpsIP31758_0372 61fa7ac68d136268efbdc5c5a11e3256 391 SUPERFAMILY SSF46565 249 289 4.45E-5 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 262 386 2.98E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.34 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 4 267 9.1E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.5E-81 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 134 381 9.1E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 1 258 1.07E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 6.2E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.8E-141 T 12-10-2018 IPR002155 Thiolase GO:0016747 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 386 1.7E-224 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 YpsIP31758_0282 c0c7890d8dd735cf219f4050491bb19c 387 PIRSF PIRSF000429 1 387 3.5E-130 T 12-10-2018 IPR002155 Thiolase GO:0016747 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 SUPERFAMILY SSF50331 236 358 6.32E-28 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 Pfam PF08402 TOBE domain 281 352 6.1E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:2.40.50.140 288 344 4.1E-32 T 12-10-2018 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 SUPERFAMILY SSF52540 4 243 1.58E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:3.40.50.300 3 221 7.9E-67 T 12-10-2018 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 Pfam PF00005 ABC transporter 19 161 5.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 Gene3D G3DSA:2.40.50.940 222 353 4.1E-32 T 12-10-2018 YpsIP31758_0913 415d16a9a0a6cdcfc6537c466633e842 368 SMART SM00382 28 211 6.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3379 fbab78bfd0f5d31b58c90ba72f75f6ed 177 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 177 2.0E-91 T 12-10-2018 IPR009502 Secretion monitor GO:0045182 YpsIP31758_3379 fbab78bfd0f5d31b58c90ba72f75f6ed 177 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 1.5E-59 T 12-10-2018 IPR009502 Secretion monitor GO:0045182 YpsIP31758_3379 fbab78bfd0f5d31b58c90ba72f75f6ed 177 PIRSF PIRSF004572 1 177 4.8E-87 T 12-10-2018 IPR009502 Secretion monitor GO:0045182 YpsIP31758_3379 fbab78bfd0f5d31b58c90ba72f75f6ed 177 Hamap MF_01332 Secretion monitor [secM]. 1 177 44.155 T 12-10-2018 IPR009502 Secretion monitor GO:0045182 YpsIP31758_3276 2a4b243f9ba4d55d345eb340f0914073 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 151 3.0E-27 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_3276 2a4b243f9ba4d55d345eb340f0914073 698 Gene3D G3DSA:2.40.170.20 162 698 2.0E-127 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_3276 2a4b243f9ba4d55d345eb340f0914073 698 SUPERFAMILY SSF56935 27 698 2.93E-123 T 12-10-2018 YpsIP31758_3276 2a4b243f9ba4d55d345eb340f0914073 698 Pfam PF00593 TonB dependent receptor 223 697 3.4E-57 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_3276 2a4b243f9ba4d55d345eb340f0914073 698 Gene3D G3DSA:2.170.130.10 25 156 1.2E-39 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_A0054 0673c999a8a9229bfceb7c56250755fe 459 Gene3D G3DSA:2.40.128.260 268 448 6.3E-60 T 12-10-2018 YpsIP31758_A0054 0673c999a8a9229bfceb7c56250755fe 459 Pfam PF03743 Bacterial conjugation TrbI-like protein 266 450 9.2E-60 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI YpsIP31758_A0054 0673c999a8a9229bfceb7c56250755fe 459 Gene3D G3DSA:1.10.1200.160 390 429 6.3E-60 T 12-10-2018 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 SUPERFAMILY SSF46955 2 121 4.76E-35 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 SMART SM00422 2 71 1.9E-31 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.4E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.4E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.4E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 Gene3D G3DSA:1.10.1660.10 1 129 2.0E-37 T 12-10-2018 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.6E-72 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 3.4E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3888 5e8c0bd933511bfb8ecdf616f430e417 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_2147 da587c1e53b3a011a6ab4d0d6877d134 509 PIRSF PIRSF006060 20 484 1.2E-62 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2147 da587c1e53b3a011a6ab4d0d6877d134 509 Pfam PF00324 Amino acid permease 34 472 3.3E-121 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_2147 da587c1e53b3a011a6ab4d0d6877d134 509 Gene3D G3DSA:1.20.1740.10 26 482 3.3E-62 T 12-10-2018 YpsIP31758_2147 da587c1e53b3a011a6ab4d0d6877d134 509 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 4.9E-149 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 SUPERFAMILY SSF51905 2 337 1.42E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PIRSF PIRSF000350 1 468 2.0E-85 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.50.50.60 9 332 1.9E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.50.50.60 150 271 1.9E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 Gene3D G3DSA:3.30.390.30 346 467 1.1E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-68 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 SUPERFAMILY SSF55424 343 466 5.84E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-62 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.2E-41 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.2E-41 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.2E-41 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.2E-41 T 12-10-2018 YpsIP31758_3360 ed8e9a1c365b4bd6493269c555d6d874 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.2E-41 T 12-10-2018 YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 7.2E-230 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 Gene3D G3DSA:3.40.640.10 21 267 7.3E-167 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 SUPERFAMILY SSF53383 8 395 1.71E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 Pfam PF00266 Aminotransferase class-V 10 373 4.7E-88 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 Gene3D G3DSA:3.90.1150.10 10 381 7.3E-167 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.482 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 YpsIP31758_1168 47eef6a78366efcbd5162fa17098164a 409 PIRSF PIRSF005572 7 389 5.9E-137 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YpsIP31758_1931 59ec54618662618ad0eb8e6f8f44f675 20 Pfam PF08255 Trp-operon Leader Peptide 2 15 6.8E-7 T 12-10-2018 IPR013205 Leader peptide, tryptophan-operon YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 SUPERFAMILY SSF49584 140 240 1.83E-18 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 SUPERFAMILY SSF49354 18 146 4.19E-41 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 Gene3D G3DSA:2.60.40.10 24 147 1.6E-42 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 146 2.6E-44 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 PRINTS PR00969 Pili chaperone signature 23 32 1.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 PRINTS PR00969 Pili chaperone signature 100 117 1.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 PRINTS PR00969 Pili chaperone signature 72 93 1.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 PRINTS PR00969 Pili chaperone signature 128 143 1.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 PRINTS PR00969 Pili chaperone signature 163 178 1.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 Gene3D G3DSA:2.60.40.10 151 245 5.9E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1676 28652548e1226dd9a10fd8805f84a784 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 237 3.4E-16 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.986 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 8.1E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.2E-20 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Gene3D G3DSA:3.30.2350.10 1 249 1.3E-93 T 12-10-2018 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Gene3D G3DSA:2.30.130.10 250 313 6.5E-28 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 8.8E-58 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF88697 251 310 2.14E-14 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 5.8E-90 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3594 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF55120 10 248 2.27E-82 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.1360.30 271 420 1.7E-197 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:2.40.50.140 1 106 1.1E-35 T 12-10-2018 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.646 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF02938 GAD domain 307 406 3.0E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 8.6E-18 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55681 108 583 2.4E-103 T 12-10-2018 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF50249 1 105 2.67E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.930.10 118 578 1.7E-197 T 12-10-2018 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 4.1E-273 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.2E-107 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2035 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55261 288 419 2.4E-45 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 YpsIP31758_3924 d88428e496b37c12194a938287748596 131 Gene3D G3DSA:3.40.1260.10 1 131 3.6E-57 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3924 d88428e496b37c12194a938287748596 131 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 131 39.481 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YpsIP31758_3924 d88428e496b37c12194a938287748596 131 Pfam PF02635 DsrE/DsrF-like family 5 131 5.2E-28 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YpsIP31758_3924 d88428e496b37c12194a938287748596 131 SUPERFAMILY SSF75169 1 131 6.67E-37 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3924 d88428e496b37c12194a938287748596 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.2E-54 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 Gene3D G3DSA:3.90.220.20 220 375 7.9E-56 T 12-10-2018 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 Gene3D G3DSA:3.90.220.20 19 156 7.9E-56 T 12-10-2018 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 SUPERFAMILY SSF116734 7 200 1.49E-28 T 12-10-2018 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 SUPERFAMILY SSF116734 205 418 5.72E-33 T 12-10-2018 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 Gene3D G3DSA:1.10.287.1120 157 416 7.9E-56 T 12-10-2018 YpsIP31758_3537 a8fdcd9e143395f29e62e58d6747710f 419 Pfam PF01420 Type I restriction modification DNA specificity domain 272 405 2.4E-8 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 2.6E-6 T 12-10-2018 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 2.6E-6 T 12-10-2018 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.6E-6 T 12-10-2018 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.6E-6 T 12-10-2018 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 2.4E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 SUPERFAMILY SSF161098 173 371 2.49E-33 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2785 b176ac1c024b466fe941d3c238e5f755 384 Gene3D G3DSA:1.10.3720.10 169 377 5.6E-31 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0844 3c88f02d1589ff246f87787a5f38841b 106 Pfam PF00355 Rieske [2Fe-2S] domain 3 88 2.7E-18 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YpsIP31758_0844 3c88f02d1589ff246f87787a5f38841b 106 Gene3D G3DSA:2.102.10.10 2 105 8.3E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_0844 3c88f02d1589ff246f87787a5f38841b 106 SUPERFAMILY SSF50022 1 103 5.11E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.8E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.8E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.8E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.8E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.8E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 SMART SM00437 280 558 1.3E-103 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Gene3D G3DSA:1.10.290.10 289 416 3.1E-174 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Pfam PF01131 DNA topoisomerase 158 593 6.6E-110 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Pfam PF01751 Toprim domain 3 135 1.8E-18 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 SUPERFAMILY SSF56712 1 608 1.96E-188 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 SMART SM00436 128 223 6.8E-36 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 SMART SM00493 1 124 5.6E-32 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Gene3D G3DSA:2.70.20.10 217 488 3.1E-174 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Gene3D G3DSA:1.10.460.10 162 602 3.1E-174 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Gene3D G3DSA:3.40.50.140 1 156 3.6E-63 T 12-10-2018 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 631 1.5E-278 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 66.114 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1979 866f43339feb1892d5088cc1908a016a 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 SUPERFAMILY SSF90123 147 459 6.8E-66 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 SMART SM00382 500 684 3.2E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Pfam PF00664 ABC transporter transmembrane region 162 428 3.1E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 SUPERFAMILY SSF52540 469 710 2.51E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 18 712 0.0 T 12-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Gene3D G3DSA:1.20.1560.10 146 459 3.1E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Pfam PF03412 Peptidase C39 family 21 133 7.7E-7 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Gene3D G3DSA:3.90.70.10 17 133 3.0E-14 T 12-10-2018 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Gene3D G3DSA:3.40.50.300 465 712 6.1E-88 T 12-10-2018 YpsIP31758_1889 31b5b0a38a7a396e14088a6f9d96a529 712 Pfam PF00005 ABC transporter 491 640 9.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 Pfam PF13872 P-loop containing NTP hydrolase pore-1 970 1207 5.2E-10 T 12-10-2018 IPR039187 Strawberry notch, AAA domain YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 Pfam PF13871 C-terminal domain on Strawberry notch homologue 1441 1670 7.7E-20 T 12-10-2018 IPR026937 Strawberry notch, helicase C domain YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 SUPERFAMILY SSF53335 548 755 1.82E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 Gene3D G3DSA:3.40.50.300 949 1158 2.5E-7 T 12-10-2018 YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 Gene3D G3DSA:3.40.50.150 564 760 1.3E-10 T 12-10-2018 YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 SUPERFAMILY SSF52540 938 1143 1.15E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0003 60d8cdc1af27156f30bc4ec5f8729944 2133 SUPERFAMILY SSF52540 1435 1595 1.84E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 Gene3D G3DSA:1.10.1040.10 207 382 1.6E-70 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 SUPERFAMILY SSF48179 204 384 1.26E-46 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 SUPERFAMILY SSF51735 1 203 2.48E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 373 6.3E-66 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 2.3E-25 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 Gene3D G3DSA:3.40.50.720 1 205 1.1E-81 T 12-10-2018 YpsIP31758_4127 c8ef0d2c8191758c0dcc4677f9e641f4 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.672 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.8E-20 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 3.5E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 1 59 7.9E-27 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily YpsIP31758_3896 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 SUPERFAMILY SSF56784 6 217 4.96E-43 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 2.3E-11 T 12-10-2018 YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 Gene3D G3DSA:3.40.50.1000 9 202 9.5E-25 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3975 ba38b511ab295d7ae61665c277592317 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 6.1E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 SUPERFAMILY SSF55048 128 197 4.97E-18 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 Gene3D G3DSA:3.30.70.250 125 197 7.5E-108 T 12-10-2018 YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.8E-129 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 Pfam PF00698 Acyl transferase domain 7 298 2.1E-36 T 12-10-2018 IPR014043 Acyl transferase YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 Gene3D G3DSA:3.40.366.10 6 286 7.5E-108 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 PIRSF PIRSF000446 1 309 1.3E-137 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 SUPERFAMILY SSF52151 4 307 8.89E-80 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YpsIP31758_1577 bab36e9d45552225780be369bd1f3e06 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 7.4E-40 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.386 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 PIRSF PIRSF029827 1 90 5.9E-44 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 Gene3D G3DSA:1.10.3880.10 1 90 1.6E-36 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 SUPERFAMILY SSF111148 1 89 4.45E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YpsIP31758_0818 75c9142cdd4d6e618471779118f3b852 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.4E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YpsIP31758_1358 6eedc305a050061258aef0d0b6440408 343 Pfam PF00419 Fimbrial protein 201 342 2.5E-15 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_1358 6eedc305a050061258aef0d0b6440408 343 Gene3D G3DSA:2.60.40.1090 206 341 5.7E-10 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_1358 6eedc305a050061258aef0d0b6440408 343 SUPERFAMILY SSF49401 207 340 4.97E-18 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_3901 d1e71548dbace9030783e0f6be326d92 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3901 d1e71548dbace9030783e0f6be326d92 101 Gene3D G3DSA:4.10.830.10 41 101 1.5E-23 T 12-10-2018 YpsIP31758_3901 d1e71548dbace9030783e0f6be326d92 101 SUPERFAMILY SSF57716 2 101 1.14E-36 T 12-10-2018 YpsIP31758_3901 d1e71548dbace9030783e0f6be326d92 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.8E-26 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3901 d1e71548dbace9030783e0f6be326d92 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.40.1380.20 342 474 2.8E-152 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:2.40.33.10 74 172 2.8E-152 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF50800 74 168 3.31E-24 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.7E-169 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 5.6E-131 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF52935 329 479 3.14E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 7.0E-29 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF51621 4 344 1.61E-87 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.20.20.60 6 341 2.8E-152 T 12-10-2018 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_2024 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YpsIP31758_1885 9768fb0c2de135cb610f4500e2df4c6e 327 SUPERFAMILY SSF53822 26 324 2.88E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1885 9768fb0c2de135cb610f4500e2df4c6e 327 Gene3D G3DSA:3.40.50.2300 27 308 2.2E-131 T 12-10-2018 YpsIP31758_1885 9768fb0c2de135cb610f4500e2df4c6e 327 Gene3D G3DSA:3.40.50.2300 132 317 2.2E-131 T 12-10-2018 YpsIP31758_1885 9768fb0c2de135cb610f4500e2df4c6e 327 PIRSF PIRSF002816 2 326 3.7E-149 T 12-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 YpsIP31758_1885 9768fb0c2de135cb610f4500e2df4c6e 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 1.2E-85 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.90.740.10 211 372 2.9E-49 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF46589 898 962 7.32E-16 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF47323 656 913 4.86E-72 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.213 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:1.10.287.380 891 963 4.0E-19 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.2E-43 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF52374 14 655 6.05E-137 T 12-10-2018 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:1.10.730.10 593 831 1.1E-72 T 12-10-2018 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 5.5E-17 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 945 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.40.50.620 373 592 4.2E-59 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Gene3D G3DSA:3.40.50.620 16 210 2.5E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 SUPERFAMILY SSF50677 205 379 1.44E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YpsIP31758_3545 eb341523bf942411a99db0a1c1cd7b6b 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 6.9E-231 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 24.221 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 Gene3D G3DSA:2.40.50.140 1 105 3.5E-41 T 12-10-2018 YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 101 9.9E-38 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 PIRSF PIRSF003135 1 102 4.7E-51 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 SUPERFAMILY SSF50249 2 104 5.83E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3638 c249487f0638b59541c1fea454587a62 105 Pfam PF00436 Single-strand binding protein family 4 87 5.2E-14 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 YpsIP31758_3787 f9ca76374e7fdf73b4196af1f549148e 151 Gene3D G3DSA:1.10.3680.10 1 151 7.7E-43 T 12-10-2018 IPR029024 TerB-like YpsIP31758_3787 f9ca76374e7fdf73b4196af1f549148e 151 SUPERFAMILY SSF158682 23 150 8.5E-17 T 12-10-2018 IPR029024 TerB-like YpsIP31758_3787 f9ca76374e7fdf73b4196af1f549148e 151 Pfam PF05099 Tellurite resistance protein TerB 15 150 3.5E-24 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 SUPERFAMILY SSF51230 4 127 5.8E-43 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.8E-53 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 Gene3D G3DSA:2.40.50.100 2 128 6.6E-50 T 12-10-2018 YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 Pfam PF01597 Glycine cleavage H-protein 8 127 1.1E-45 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YpsIP31758_0864 e43667fc284c08e165691a2d2cefeed5 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 39.155 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 2.5E-182 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.7E-84 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.622 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF51246 329 425 6.8E-34 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.30.1490.20 121 190 6.4E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF52440 1 103 6.76E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 4.5E-34 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.90.600.10 330 425 1.7E-36 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.30.470.20 191 329 2.8E-61 T 12-10-2018 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 SMART SM01209 103 296 2.3E-141 T 12-10-2018 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.40.50.20 2 95 2.7E-37 T 12-10-2018 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 SMART SM01210 330 424 3.1E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF56059 104 323 1.38E-67 T 12-10-2018 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3844 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 4.4E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 7 400 53.46 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 Pfam PF00155 Aminotransferase class I and II 48 392 7.9E-79 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 Gene3D G3DSA:3.90.1150.10 43 393 3.5E-140 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 10 402 1.1E-216 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 SUPERFAMILY SSF53383 10 401 7.45E-127 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0071 734da04c4964bd6c263c914c3f48f20f 403 Gene3D G3DSA:3.40.640.10 63 301 3.5E-140 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1665 c8763fdf1ba9ed83b21873d3715806eb 194 SMART SM00972 131 191 5.1E-15 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1665 c8763fdf1ba9ed83b21873d3715806eb 194 Pfam PF05229 Spore Coat Protein U domain 43 191 1.7E-28 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF51306 76 198 1.26E-38 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:1.10.10.10 1 70 3.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:2.10.109.10 80 202 7.9E-47 T 12-10-2018 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF46785 3 69 6.36E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF00717 Peptidase S24-like 114 179 3.4E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.42 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YpsIP31758_3770 24581eb8c2ba7bd79c5837445181b0d7 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 2.8E-83 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 Gene3D G3DSA:1.10.300.10 102 201 2.5E-106 T 12-10-2018 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 SMART SM00788 4 425 2.8E-297 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.503 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.2E-202 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 SUPERFAMILY SSF52540 3 431 6.16E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 Gene3D G3DSA:3.90.170.10 267 432 2.0E-71 T 12-10-2018 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 8.8E-179 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YpsIP31758_3648 44e649d9f35b74c8d69a4416178e98bb 432 Gene3D G3DSA:3.40.440.10 6 255 2.5E-106 T 12-10-2018 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.7E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF55681 104 464 3.98E-96 T 12-10-2018 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.548 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF50249 14 102 4.07E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:2.40.50.140 2 104 1.4E-21 T 12-10-2018 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:3.30.930.10 109 465 1.6E-109 T 12-10-2018 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 6.5E-83 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2558 578d5548b3219df4688d269372e5ba47 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.2E-209 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 YpsIP31758_2670 b6fe9c8225165a59c033ffa61780e270 503 Pfam PF00324 Amino acid permease 25 478 5.4E-143 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_2670 b6fe9c8225165a59c033ffa61780e270 503 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_2670 b6fe9c8225165a59c033ffa61780e270 503 PIRSF PIRSF006060 3 495 1.5E-82 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2670 b6fe9c8225165a59c033ffa61780e270 503 Gene3D G3DSA:1.20.1740.10 16 485 2.3E-63 T 12-10-2018 YpsIP31758_3922 d6cc21370f7619b78754c5bf8975bc98 95 Gene3D G3DSA:3.40.1260.10 1 95 2.1E-30 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3922 d6cc21370f7619b78754c5bf8975bc98 95 Pfam PF04077 DsrH like protein 7 92 3.8E-29 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YpsIP31758_3922 d6cc21370f7619b78754c5bf8975bc98 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 29.501 T 12-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 YpsIP31758_3922 d6cc21370f7619b78754c5bf8975bc98 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 2.0E-31 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YpsIP31758_3922 d6cc21370f7619b78754c5bf8975bc98 95 SUPERFAMILY SSF75169 1 95 9.42E-31 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 456 2.3E-112 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Gene3D G3DSA:2.40.30.170 323 438 1.4E-10 T 12-10-2018 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Pfam PF13533 Biotin-lipoyl like 85 130 1.7E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 ProSitePatterns PS00543 HlyD family secretion proteins signature. 420 442 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Gene3D G3DSA:2.40.50.100 81 114 2.0E-8 T 12-10-2018 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 51 74 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 377 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 435 455 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 320 341 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 93 113 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 377 400 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 435 8.1E-60 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Gene3D G3DSA:1.10.287.470 115 195 2.0E-8 T 12-10-2018 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 SUPERFAMILY SSF111369 84 150 9.68E-6 T 12-10-2018 YpsIP31758_1890 bfbd73abcfb914cfa995f0c50c6ea0a5 456 Pfam PF13437 HlyD family secretion protein 307 410 9.0E-16 T 12-10-2018 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PIRSF PIRSF005536 1 707 4.9E-256 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 Gene3D G3DSA:2.70.98.60 2 274 9.5E-50 T 12-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 SUPERFAMILY SSF51445 289 621 1.45E-108 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 308 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 430 445 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 257 277 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 478 494 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 503 519 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 206 221 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 372 394 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 322 337 3.8E-59 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 237 6.2E-44 T 12-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 Gene3D G3DSA:3.20.20.70 275 590 3.5E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 Pfam PF02065 Melibiase 254 592 2.6E-122 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_2395 3394c24f17ccf62d75db8e6d8b9cac83 708 ProSitePatterns PS00512 Alpha-galactosidase signature. 323 338 - T 12-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:1.10.10.10 122 218 1.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 SMART SM00862 145 216 2.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00072 Response regulator receiver domain 4 113 2.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.9E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 SUPERFAMILY SSF52172 1 175 2.2E-39 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 SMART SM00448 1 112 5.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3607 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:3.40.50.2300 1 121 5.4E-40 T 12-10-2018 YpsIP31758_1169 fb7a0275ed6f6692408bf6c1c1a2b07c 128 Gene3D G3DSA:3.90.1010.10 1 128 6.6E-58 T 12-10-2018 YpsIP31758_1169 fb7a0275ed6f6692408bf6c1c1a2b07c 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.0E-68 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 YpsIP31758_1169 fb7a0275ed6f6692408bf6c1c1a2b07c 128 SUPERFAMILY SSF82649 1 125 4.45E-47 T 12-10-2018 YpsIP31758_1169 fb7a0275ed6f6692408bf6c1c1a2b07c 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.5E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 YpsIP31758_0916 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Gene3D G3DSA:1.10.3720.10 5 270 2.9E-61 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0916 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 SUPERFAMILY SSF161098 10 283 3.18E-68 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0916 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 4.5E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 9.0E-210 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Pfam PF00206 Lyase 6 301 8.0E-97 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.10.275.10 1 107 1.1E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.021 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 SUPERFAMILY SSF48557 3 456 3.46E-141 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.3E-23 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.2E-67 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.20.200.10 108 446 3.2E-148 T 12-10-2018 YpsIP31758_0129 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.10.40.30 363 433 3.2E-148 T 12-10-2018 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 7.0E-42 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 8.3E-118 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.2E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.8.60 185 258 1.5E-29 T 12-10-2018 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.10.10 260 334 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.486 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:3.40.50.300 23 184 8.3E-40 T 12-10-2018 YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 SMART SM00382 54 181 1.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF52540 23 255 4.07E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2030 054eb81548425a83568a9c3c66137996 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 4.6E-149 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YpsIP31758_1774 003f03157bc3dfe386f38ce71e55fcbb 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.3E-128 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 YpsIP31758_1774 003f03157bc3dfe386f38ce71e55fcbb 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 53.66 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 YpsIP31758_1774 003f03157bc3dfe386f38ce71e55fcbb 286 SUPERFAMILY SSF53613 1 279 2.03E-76 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_1774 003f03157bc3dfe386f38ce71e55fcbb 286 Gene3D G3DSA:3.40.1190.20 1 286 5.5E-91 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_1774 003f03157bc3dfe386f38ce71e55fcbb 286 Pfam PF08543 Phosphomethylpyrimidine kinase 90 263 1.4E-16 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SUPERFAMILY SSF53098 322 468 3.29E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SUPERFAMILY SSF47781 469 557 9.12E-29 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Pfam PF00575 S1 RNA binding domain 649 719 3.8E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Gene3D G3DSA:2.40.50.140 630 723 1.3E-28 T 12-10-2018 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Gene3D G3DSA:3.30.420.140 325 450 5.5E-152 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SMART SM00732 326 423 1.5E-34 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SUPERFAMILY SSF47781 559 631 2.45E-19 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Gene3D G3DSA:1.10.150.310 498 629 1.7E-50 T 12-10-2018 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.3E-28 T 12-10-2018 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SUPERFAMILY SSF50249 637 722 9.7E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.9E-68 T 12-10-2018 IPR018974 Tex-like protein, N-terminal YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Gene3D G3DSA:1.10.10.650 2 109 1.6E-38 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SUPERFAMILY SSF158832 3 321 1.96E-118 T 12-10-2018 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Pfam PF16921 Tex protein YqgF-like domain 327 450 3.6E-49 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 SMART SM00316 648 719 1.2E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_3982 ff7bccc78c2d65c8461a89c1c3660633 791 Gene3D G3DSA:1.10.3500.10 112 497 5.5E-152 T 12-10-2018 IPR023323 Tex-like domain superfamily YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 641 671 0.099 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 621 659 0.064 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 1.6E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 702 733 1.4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 544 0.019 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 837 863 0.062 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1235 1272 0.013 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF13332 Haemagluttinin repeat 1456 1520 4.0E-4 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF13332 Haemagluttinin repeat 1522 1678 5.6E-9 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF13332 Haemagluttinin repeat 1750 1925 9.4E-43 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05860 haemagglutination activity domain 74 207 1.0E-31 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Gene3D G3DSA:2.160.20.10 75 352 4.1E-103 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 SUPERFAMILY SSF51126 77 347 1.04E-65 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 SMART SM00912 88 208 4.0E-45 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF04829 Pre-toxin domain with VENN motif 2279 2329 5.6E-23 T 12-10-2018 IPR006914 VENN motif-containing domain YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF14436 Bacterial EndoU nuclease 2463 2586 8.2E-7 T 12-10-2018 IPR029501 Bacterial EndoU nuclease YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05594 Haemagluttinin repeat 580 669 36.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05594 Haemagluttinin repeat 680 740 0.38 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05594 Haemagluttinin repeat 316 373 2.1E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05594 Haemagluttinin repeat 929 970 70.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF05594 Haemagluttinin repeat 1210 1268 3.5 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.2E-6 T 12-10-2018 IPR024973 ESPR domain YpsIP31758_1519 a4d05a3504bbba00e3a7d8dce185452b 2588 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 6.3E-21 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_2078 6ff0dd72e9c6a04da8a72351206a3fd6 132 SMART SM00450 19 116 2.4E-11 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_2078 6ff0dd72e9c6a04da8a72351206a3fd6 132 Gene3D G3DSA:3.40.250.10 2 119 1.3E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2078 6ff0dd72e9c6a04da8a72351206a3fd6 132 SUPERFAMILY SSF52821 17 119 9.82E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2078 6ff0dd72e9c6a04da8a72351206a3fd6 132 Pfam PF00581 Rhodanese-like domain 26 112 1.2E-11 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_B0019 fa6cbd0e61cd6593503f770bd2073e78 175 Pfam PF08805 PilS N terminal 50 172 6.0E-23 T 12-10-2018 IPR014911 Type 4 secretion system, PilS, N-terminal YpsIP31758_B0019 fa6cbd0e61cd6593503f770bd2073e78 175 Gene3D G3DSA:3.30.1690.10 44 174 6.8E-26 T 12-10-2018 YpsIP31758_B0019 fa6cbd0e61cd6593503f770bd2073e78 175 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 35 4.7E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_B0019 fa6cbd0e61cd6593503f770bd2073e78 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 34 1.3E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_B0019 fa6cbd0e61cd6593503f770bd2073e78 175 SUPERFAMILY SSF54523 47 172 1.49E-20 T 12-10-2018 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 6.9E-57 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 SUPERFAMILY SSF46955 1 126 3.0E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.3E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 Gene3D G3DSA:1.10.1660.10 1 125 3.9E-32 T 12-10-2018 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3026 5b7b1ea391a6d5cd3ab592e20c1640bf 139 SMART SM00422 1 70 2.5E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 12-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.585 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 Pfam PF00962 Adenosine/AMP deaminase 6 329 1.0E-94 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 Gene3D G3DSA:3.20.20.140 4 332 1.6E-97 T 12-10-2018 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.6E-108 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 YpsIP31758_1878 cbdca54b98dac0e81aa3b0c503537aff 334 SUPERFAMILY SSF51556 5 326 1.1E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_1429 ddab0767949494ef2d41ef0a9fcb44fd 228 SUPERFAMILY SSF161098 8 205 4.71E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1429 ddab0767949494ef2d41ef0a9fcb44fd 228 Gene3D G3DSA:1.10.3720.10 1 223 7.3E-49 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1429 ddab0767949494ef2d41ef0a9fcb44fd 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 3.5E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_1429 ddab0767949494ef2d41ef0a9fcb44fd 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 3.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 SUPERFAMILY SSF69255 391 478 1.36E-33 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Gene3D G3DSA:3.30.1920.30 250 313 6.0E-94 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 SUPERFAMILY SSF69349 469 716 1.57E-48 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 548 1.6E-204 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Pfam PF05954 Phage late control gene D protein (GPD) 58 356 1.3E-86 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Gene3D G3DSA:2.30.110.50 51 356 6.0E-94 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 SUPERFAMILY SSF69279 218 392 1.21E-42 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 530 551 1.5E-4 T 12-10-2018 IPR010609 Gp5, C-terminal YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 51 530 3.9E-206 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Gene3D G3DSA:2.40.50.230 384 484 1.5E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 SUPERFAMILY SSF69279 39 214 7.94E-55 T 12-10-2018 YpsIP31758_0696 713556232c7e10fd55e52ca5a01c5d55 741 Gene3D G3DSA:3.55.50.10 127 218 6.0E-94 T 12-10-2018 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Pfam PF00459 Inositol monophosphatase family 2 257 2.4E-70 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.40.190.80 142 267 1.1E-40 T 12-10-2018 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.1E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 SUPERFAMILY SSF56655 1 258 1.96E-85 T 12-10-2018 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.30.540.10 1 140 5.4E-52 T 12-10-2018 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.2E-37 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.2E-37 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.2E-37 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YpsIP31758_1165 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.2E-37 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YpsIP31758_3530 92c906f8691b1100b8a950eb36752943 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 2.8E-38 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 YpsIP31758_3530 92c906f8691b1100b8a950eb36752943 106 SUPERFAMILY SSF52794 3 99 1.92E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_3530 92c906f8691b1100b8a950eb36752943 106 Gene3D G3DSA:3.40.50.2300 1 106 1.0E-39 T 12-10-2018 YpsIP31758_3530 92c906f8691b1100b8a950eb36752943 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 4.4E-19 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF04055 Radical SAM superfamily 18 178 1.0E-29 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 SMART SM00729 13 217 9.7E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 38.551 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 1.7E-6 T 12-10-2018 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 1.4E-104 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 Gene3D G3DSA:3.20.20.70 1 326 1.3E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 1.6E-40 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2836 49cd695bbb4ae87cab0ca67bc84073f5 326 SUPERFAMILY SSF102114 4 279 8.11E-70 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52440 558 676 1.11E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF48108 396 554 5.62E-53 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.20 1 116 1.1E-50 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:1.10.1030.10 404 522 8.6E-39 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.470.20 119 403 2.3E-132 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-76 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 5.7E-37 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.341 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52335 939 1071 1.7E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF52440 1 127 5.75E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Pfam PF02142 MGS-like domain 957 1041 4.7E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SMART SM01096 424 547 2.5E-74 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.1380 937 1073 3.3E-35 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.30.470.20 666 936 1.2E-124 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF56059 674 934 4.77E-104 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.0E-39 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SUPERFAMILY SSF56059 128 401 2.3E-109 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Gene3D G3DSA:3.40.50.20 524 663 2.4E-64 T 12-10-2018 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 SMART SM00851 956 1042 1.3E-30 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.15 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_3453 507eeba121553080ab299474a8261946 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YpsIP31758_3490 b6d757bf3ed8ce76376265c7ce02db66 376 Pfam PF02661 Fic/DOC family 117 227 9.4E-17 T 12-10-2018 IPR003812 Fido domain YpsIP31758_3490 b6d757bf3ed8ce76376265c7ce02db66 376 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 2.0E-26 T 12-10-2018 IPR025230 Domain of unknown function DUF4172 YpsIP31758_3490 b6d757bf3ed8ce76376265c7ce02db66 376 Gene3D G3DSA:1.10.3290.10 40 279 4.9E-38 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_3490 b6d757bf3ed8ce76376265c7ce02db66 376 SUPERFAMILY SSF140931 103 298 9.42E-39 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_3490 b6d757bf3ed8ce76376265c7ce02db66 376 Gene3D G3DSA:1.10.10.10 280 373 2.1E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2380 eb11f66507417502062442b188a63595 185 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 37 182 4.7E-69 T 12-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YpsIP31758_2380 eb11f66507417502062442b188a63595 185 Gene3D G3DSA:2.40.160.20 26 185 2.5E-71 T 12-10-2018 YpsIP31758_2380 eb11f66507417502062442b188a63595 185 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 1 185 41.221 T 12-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YpsIP31758_2380 eb11f66507417502062442b188a63595 185 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 37 173 4.0E-71 T 12-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YpsIP31758_2380 eb11f66507417502062442b188a63595 185 SUPERFAMILY SSF56925 27 185 9.42E-81 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.64 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 SMART SM00518 3 279 5.8E-129 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 SUPERFAMILY SSF51658 1 278 5.37E-99 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 6.5E-107 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 6.1E-41 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YpsIP31758_2675 08fb28bd20528d4e7000b9f18fd9ed71 285 Gene3D G3DSA:3.20.20.150 1 283 1.3E-109 T 12-10-2018 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 386 1.0E-93 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 Gene3D G3DSA:3.40.640.10 8 256 5.5E-62 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 388 3.7E-134 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 PIRSF PIRSF001434 1 390 1.2E-105 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 Gene3D G3DSA:3.90.1150.10 257 390 3.6E-35 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3806 5e98618c3d7679107f3def897e56d2e3 393 SUPERFAMILY SSF53383 45 386 2.02E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3469 4dcbfb89d791beb40088128faa403d61 459 SUPERFAMILY SSF103473 19 442 1.44E-64 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3469 4dcbfb89d791beb40088128faa403d61 459 Gene3D G3DSA:1.20.1250.20 36 450 1.0E-58 T 12-10-2018 YpsIP31758_3469 4dcbfb89d791beb40088128faa403d61 459 Pfam PF07690 Major Facilitator Superfamily 82 408 4.6E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 Pfam PF02545 Maf-like protein 3 185 1.4E-41 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 PIRSF PIRSF006305 1 193 3.4E-37 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.237 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 3.1E-55 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 SUPERFAMILY SSF52972 1 186 2.49E-56 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_1571 b902a4a2e9a2ed5cc33a4fbdfad665bf 198 Gene3D G3DSA:3.90.950.10 2 194 4.4E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 Pfam PF02300 Fumarate reductase subunit C 3 128 6.9E-53 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 PIRSF PIRSF000180 2 130 8.5E-56 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 SUPERFAMILY SSF81343 2 129 5.56E-56 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 114 6.0E-58 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.237 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 YpsIP31758_3669 4f278be45f0104b000392c8a8fd068ea 130 Gene3D G3DSA:1.20.1300.10 2 130 2.4E-49 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3805 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Gene3D G3DSA:3.40.50.300 1 266 5.8E-80 T 12-10-2018 YpsIP31758_3805 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Pfam PF00005 ABC transporter 28 176 6.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3805 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3805 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SMART SM00382 36 225 5.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3805 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SUPERFAMILY SSF52540 11 241 7.21E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1883 951e383ff1e011697b668a7cd4c7cf82 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 79 336 3.5E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 SUPERFAMILY SSF52374 4 328 7.42E-109 T 12-10-2018 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Pfam PF01479 S4 domain 359 400 2.5E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.08 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 SUPERFAMILY SSF55174 327 423 1.1E-20 T 12-10-2018 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 3.2E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 3.2E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.2E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 3.2E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 3.5E-144 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:1.10.240.10 228 329 6.4E-36 T 12-10-2018 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.1E-91 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:3.10.290.10 330 424 1.3E-28 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 SMART SM00363 357 419 0.0049 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1773 3bdc7ed401d50f3c043d44b9625a3564 424 Gene3D G3DSA:3.40.50.620 1 227 8.8E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 Gene3D G3DSA:2.40.128.130 335 638 6.3E-70 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 SMART SM00869 380 627 1.1E-40 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 Pfam PF03212 Pertactin 203 323 2.4E-31 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 Gene3D G3DSA:2.160.20.20 25 325 9.4E-36 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 SUPERFAMILY SSF103515 349 638 6.93E-47 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 527 550 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 359 377 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 421 445 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 593 618 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 508 525 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 PRINTS PR01484 Pertactin virulence factor family signature 618 638 2.7E-10 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 221 638 3.8E-116 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 SUPERFAMILY SSF51126 24 323 5.65E-31 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_2985 26d08f73e6fcd5e89b708d7ad2284cd4 638 Pfam PF03797 Autotransporter beta-domain 383 617 1.5E-46 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 3 624 4.8E-224 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Gene3D G3DSA:2.170.130.10 26 156 2.9E-39 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 3.3E-30 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 SUPERFAMILY SSF56935 32 624 1.25E-122 T 12-10-2018 YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 624 35.006 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Gene3D G3DSA:2.40.170.20 157 624 7.2E-156 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_0142 9f7c9ef2c2f2cfee3cbc18c270e5f80e 624 Pfam PF00593 TonB dependent receptor 239 623 1.8E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 Gene3D G3DSA:3.30.420.40 2 253 3.1E-79 T 12-10-2018 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 446 5.5E-48 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 PIRSF PIRSF000538 3 493 2.8E-128 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 SUPERFAMILY SSF53067 257 490 1.65E-61 T 12-10-2018 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 Gene3D G3DSA:3.30.420.40 257 493 3.8E-69 T 12-10-2018 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.2E-60 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_3247 f1e43ab31ae780a862575bb12b7e67bc 495 SUPERFAMILY SSF53067 6 254 3.42E-74 T 12-10-2018 YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 2.9E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 Gene3D G3DSA:3.40.50.1000 5 265 4.2E-95 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 Gene3D G3DSA:3.30.1240.10 87 193 4.2E-95 T 12-10-2018 YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 SUPERFAMILY SSF56784 1 268 8.68E-78 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 12-10-2018 YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 3.5E-69 T 12-10-2018 YpsIP31758_4149 7668232d4df48ff5061706885ac956fe 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 5.8E-68 T 12-10-2018 IPR000150 Cof family GO:0016787 YpsIP31758_0344 1b36f089fd512cd2b0db4879954e2bf6 299 SUPERFAMILY SSF51658 8 289 8.15E-37 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_0344 1b36f089fd512cd2b0db4879954e2bf6 299 Pfam PF01261 Xylose isomerase-like TIM barrel 20 228 2.3E-27 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YpsIP31758_0344 1b36f089fd512cd2b0db4879954e2bf6 299 Gene3D G3DSA:3.20.20.150 6 296 5.1E-44 T 12-10-2018 YpsIP31758_1114 149f815cc33abc0374dc5c469f5a1f4b 248 SUPERFAMILY SSF102705 2 247 8.24E-83 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YpsIP31758_1114 149f815cc33abc0374dc5c469f5a1f4b 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 247 8.4E-70 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YpsIP31758_1114 149f815cc33abc0374dc5c469f5a1f4b 248 Gene3D G3DSA:3.40.1390.30 15 233 3.3E-86 T 12-10-2018 YpsIP31758_1114 149f815cc33abc0374dc5c469f5a1f4b 248 Gene3D G3DSA:3.40.1390.30 98 219 3.3E-86 T 12-10-2018 YpsIP31758_1114 149f815cc33abc0374dc5c469f5a1f4b 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 234 8.0E-57 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 Gene3D G3DSA:3.40.630.30 1 211 7.0E-49 T 12-10-2018 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 12-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 8.3E-63 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 Pfam PF00765 Autoinducer synthase 8 188 7.9E-82 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_1546 7479152a2ac84b80f65afa95f5ee9cf2 214 SUPERFAMILY SSF55729 1 209 6.53E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 Gene3D G3DSA:3.40.30.10 1 82 2.1E-29 T 12-10-2018 YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 60 73 2.5E-17 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 46 59 2.5E-17 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 4 22 2.5E-17 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 Pfam PF00462 Glutaredoxin 4 63 5.0E-25 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 7.3E-37 T 12-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 YpsIP31758_0077 5bc3aad8df72deac04cf0c261d1a961f 82 SUPERFAMILY SSF52833 1 82 1.14E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 Gene3D G3DSA:3.20.20.10 33 279 2.9E-141 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 8.5E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 8.5E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.5E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.5E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.5E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 SUPERFAMILY SSF51419 25 277 6.94E-57 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.8E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.8E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 2.8E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 2.8E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 11 418 1.7E-126 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 Gene3D G3DSA:2.40.37.10 22 415 2.9E-141 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 376 7.9E-23 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 48 275 5.3E-57 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 SUPERFAMILY SSF50621 251 419 4.6E-56 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_0973 b56db39ee6b4eb35d199d62696536f22 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 37.784 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 21 855 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SMART SM00382 601 758 2.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SMART SM00382 226 371 5.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:3.40.50.300 554 769 5.6E-62 T 12-10-2018 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SMART SM01086 772 864 0.0094 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:3.40.50.300 372 548 2.9E-36 T 12-10-2018 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 78 2.8E-7 T 12-10-2018 IPR004176 Clp, N-terminal YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 6.1E-31 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 9.9E-23 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 9.9E-23 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 9.9E-23 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 9.9E-23 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:3.40.50.300 175 370 7.1E-62 T 12-10-2018 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 364 5.1E-11 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF81923 18 134 9.81E-18 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF52540 189 504 4.5E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:1.10.1780.10 4 164 1.4E-31 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_3430 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF52540 550 843 1.5E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1307 635413835a9a4f5cc4dbbe7d6af84660 393 Gene3D G3DSA:3.40.640.10 70 293 5.9E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1307 635413835a9a4f5cc4dbbe7d6af84660 393 Gene3D G3DSA:3.90.1150.10 13 383 5.9E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1307 635413835a9a4f5cc4dbbe7d6af84660 393 Pfam PF00155 Aminotransferase class I and II 59 381 1.4E-33 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1307 635413835a9a4f5cc4dbbe7d6af84660 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 389 1.4E-148 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 YpsIP31758_1307 635413835a9a4f5cc4dbbe7d6af84660 393 SUPERFAMILY SSF53383 1 390 9.79E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0470 d4cc4ec1d54cd0f43f816dfe11e69e0f 217 SUPERFAMILY SSF52317 1 215 1.83E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0470 d4cc4ec1d54cd0f43f816dfe11e69e0f 217 PIRSF PIRSF006320 1 216 8.4E-100 T 12-10-2018 IPR026041 Glyoxalase ElbB YpsIP31758_0470 d4cc4ec1d54cd0f43f816dfe11e69e0f 217 Gene3D G3DSA:3.40.50.880 1 217 3.5E-90 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.1E-111 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 SUPERFAMILY SSF118215 9 401 1.05E-121 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 9.5E-29 T 12-10-2018 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.601 T 12-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 Gene3D G3DSA:1.10.3860.10 1 418 1.9E-119 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_4064 dc921e41b127560738c5a3d18c7ecd42 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF01434 Peptidase family M41 382 591 1.1E-81 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 SMART SM00382 184 323 1.9E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:2.40.50.920 24 99 6.6E-36 T 12-10-2018 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.379 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:3.40.50.300 141 320 1.4E-70 T 12-10-2018 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.6E-247 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:1.20.58.760 397 600 2.9E-69 T 12-10-2018 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF140990 402 601 3.14E-72 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:1.10.8.60 322 396 1.1E-28 T 12-10-2018 YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF52540 142 391 6.57E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3602 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF06480 FtsH Extracellular 5 93 9.8E-15 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 YpsIP31758_2401 dc3b118ee56d9268ac51c5d7a3700a3f 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.3E-131 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 YpsIP31758_2401 dc3b118ee56d9268ac51c5d7a3700a3f 430 PIRSF PIRSF006066 1 428 6.5E-176 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 YpsIP31758_2401 dc3b118ee56d9268ac51c5d7a3700a3f 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 3.2E-113 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 SUPERFAMILY SSF160240 209 288 2.09E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 SUPERFAMILY SSF161111 9 207 1.44E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 Gene3D G3DSA:1.20.1510.10 8 206 9.6E-66 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 2.7E-72 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 Pfam PF01545 Cation efflux family 16 206 8.2E-43 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 4.4E-25 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain YpsIP31758_0088 c9f288104d917bab0100b67c08c45adc 300 Gene3D G3DSA:3.30.70.1350 207 290 4.2E-33 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 SUPERFAMILY SSF69593 246 487 9.15E-25 T 12-10-2018 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 PIRSF PIRSF500064 2 815 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 SMART SM00563 299 426 7.4E-28 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.578 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 PIRSF PIRSF000437 19 812 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 YpsIP31758_3772 880f19737f3d3305799e34a1049f6138 825 Pfam PF01553 Acyltransferase 281 423 3.6E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 Pfam PF08378 Nuclease-related domain 17 114 6.1E-10 T 12-10-2018 IPR011528 Nuclease-related domain, NERD YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 SUPERFAMILY SSF52540 234 604 3.63E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 Gene3D G3DSA:3.40.50.300 237 425 1.6E-24 T 12-10-2018 YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 Gene3D G3DSA:3.40.50.300 429 616 4.8E-28 T 12-10-2018 YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 Pfam PF13361 UvrD-like helicase C-terminal domain 536 603 6.5E-6 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YpsIP31758_0807 673cef95c512b4f43bb9eecd5e86c926 616 Pfam PF13245 AAA domain 248 404 7.1E-9 T 12-10-2018 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.60.20.10 2 414 3.2E-161 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 PIRSF PIRSF000485 1 483 1.5E-169 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 Pfam PF00156 Phosphoribosyl transferase domain 294 394 5.8E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF53271 252 485 1.31E-72 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.0E-161 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.614 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF56235 2 259 1.2E-75 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.40.50.2020 279 443 3.2E-161 T 12-10-2018 YpsIP31758_1426 706aabb44dd3580870f752a38ad7d061 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 4.8E-15 T 12-10-2018 YpsIP31758_1531 936cd7ba433348e26b8d43a3f864367b 312 SUPERFAMILY SSF75005 23 310 4.47E-56 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YpsIP31758_1531 936cd7ba433348e26b8d43a3f864367b 312 Pfam PF08950 Protein of unknown function (DUF1861) 22 310 1.5E-123 T 12-10-2018 IPR015045 Protein of unknown function DUF1861 YpsIP31758_1531 936cd7ba433348e26b8d43a3f864367b 312 Gene3D G3DSA:2.115.10.20 15 311 2.5E-112 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.818 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.4E-236 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF63380 105 272 4.86E-35 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:2.40.30.10 126 264 1.4E-48 T 12-10-2018 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 1.6E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PIRSF PIRSF000044 1 407 8.7E-218 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:3.10.20.30 34 125 2.9E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:3.40.50.80 275 393 1.4E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 5.0E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 1.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF54292 35 124 1.06E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.9E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_3161 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF52343 255 402 1.96E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 Gene3D G3DSA:3.40.50.300 2 237 3.0E-56 T 12-10-2018 YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 Gene3D G3DSA:3.40.50.300 239 493 2.2E-49 T 12-10-2018 YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 SMART SM00382 280 474 1.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 SMART SM00382 29 217 1.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 Pfam PF00005 ABC transporter 272 425 9.4E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 SUPERFAMILY SSF52540 263 484 8.13E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 Pfam PF00005 ABC transporter 20 169 4.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0148 177a169a9cc3814505ba8ef073a7c315 496 SUPERFAMILY SSF52540 3 227 6.41E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 SUPERFAMILY SSF103515 827 1117 8.37E-46 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 721 1117 1.5E-90 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 Gene3D G3DSA:2.160.20.20 509 811 3.1E-26 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 SMART SM00869 856 1106 1.0E-35 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 Gene3D G3DSA:2.40.128.130 812 1117 6.4E-55 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 Pfam PF03797 Autotransporter beta-domain 860 1093 1.6E-37 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 SUPERFAMILY SSF51126 430 813 1.48E-24 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_1177 f332dcedb08313c554748e6e557bc1f0 1117 Pfam PF03212 Pertactin 707 807 5.7E-13 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_3610 87933ac9b489c0a4c758a509db6351d7 328 SUPERFAMILY SSF103481 43 147 1.26E-14 T 12-10-2018 YpsIP31758_3610 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 161 273 2.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_3610 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 9 144 1.4E-28 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:2.40.30.170 335 419 4.9E-19 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:2.40.30.170 54 64 4.3E-8 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 331 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 367 2.9E-51 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Pfam PF13437 HlyD family secretion protein 298 409 1.4E-13 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:2.40.50.100 298 334 4.9E-19 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:2.40.50.100 65 98 4.3E-8 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 SUPERFAMILY SSF111369 230 345 1.96E-6 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Pfam PF13533 Biotin-lipoyl like 69 112 7.4E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 442 3.4E-109 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:1.10.287.470 99 193 4.3E-8 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 Gene3D G3DSA:1.10.287.470 216 297 4.9E-19 T 12-10-2018 YpsIP31758_0133 306816afe3f8e329b4dd322eb5ca81e2 442 ProSitePatterns PS00543 HlyD family secretion proteins signature. 406 428 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 12-10-2018 IPR026593 Protein translocase subunit SecY YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 1.3E-119 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 12-10-2018 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.6E-123 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 13 429 1.9E-164 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3894 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3216 5565edec86bfc43d6dbc973239766659 120 Gene3D G3DSA:3.30.160.100 1 107 1.4E-36 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like YpsIP31758_3216 5565edec86bfc43d6dbc973239766659 120 SUPERFAMILY SSF69754 3 107 1.57E-31 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like YpsIP31758_3216 5565edec86bfc43d6dbc973239766659 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.6E-32 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YpsIP31758_3216 5565edec86bfc43d6dbc973239766659 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.1E-20 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 2.1E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 1 121 6.5E-48 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 122 180 2.3E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 9.5E-8 T 12-10-2018 IPR005824 KOW YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 12-10-2018 IPR005824 KOW YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YpsIP31758_3865 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_2870 9c836096e8015734fed22a593e746e5c 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.2E-24 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 YpsIP31758_2870 9c836096e8015734fed22a593e746e5c 142 Gene3D G3DSA:3.30.420.270 60 133 3.2E-24 T 12-10-2018 YpsIP31758_2870 9c836096e8015734fed22a593e746e5c 142 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 140 27.823 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 YpsIP31758_2870 9c836096e8015734fed22a593e746e5c 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 8.1E-38 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 Gene3D G3DSA:3.40.630.10 95 431 1.7E-106 T 12-10-2018 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 6.6E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 6.6E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 6.6E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 6.6E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 6.6E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 PIRSF PIRSF036388 2 432 2.3E-239 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 SUPERFAMILY SSF53187 108 427 1.51E-102 T 12-10-2018 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 Pfam PF12404 Peptidase 6 82 1.2E-35 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 7.6E-105 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YpsIP31758_1175 faafcb459e5f60ceacf1113e6a2afc7b 432 Hamap MF_00504 Peptidase B [pepB]. 4 428 70.192 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YpsIP31758_3222 530c99e2c1110939569dd3dc4aeb78cf 447 PIRSF PIRSF004539 1 447 5.7E-186 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_3222 530c99e2c1110939569dd3dc4aeb78cf 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 2.1E-160 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_3222 530c99e2c1110939569dd3dc4aeb78cf 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 6.4E-151 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 Gene3D G3DSA:3.90.180.10 9 367 4.7E-156 T 12-10-2018 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF50129 321 372 3.72E-12 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF51735 163 337 2.56E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 SMART SM00829 13 370 5.0E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 Gene3D G3DSA:3.40.50.720 177 315 4.7E-156 T 12-10-2018 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 6.3E-224 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 Pfam PF00107 Zinc-binding dehydrogenase 200 327 5.0E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 4.8E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_2473 fc2f023f78d8685a7af4915e97165ac0 379 SUPERFAMILY SSF50129 2 190 7.0E-74 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.4E-69 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 PIRSF PIRSF000774 1 477 6.9E-147 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.0E-15 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 Gene3D G3DSA:1.10.10.60 417 474 1.9E-22 T 12-10-2018 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 Gene3D G3DSA:1.10.10.1330 116 252 1.3E-24 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 6.0E-60 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 YpsIP31758_0441 6d0a8219a363c0ca206e9aa9ca717a4c 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 2.7E-156 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 SUPERFAMILY SSF46785 456 524 2.29E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Gene3D G3DSA:1.10.10.10 588 648 1.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Pfam PF09107 Elongation factor SelB, winged helix 602 646 6.6E-20 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 SUPERFAMILY SSF50447 180 300 2.65E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Gene3D G3DSA:1.10.10.10 528 587 7.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Pfam PF09106 Elongation factor SelB, winged helix 466 521 3.9E-15 T 12-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Gene3D G3DSA:3.40.50.300 1 172 3.1E-45 T 12-10-2018 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 648 9.6E-207 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 1.5E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 SUPERFAMILY SSF50465 280 389 2.45E-5 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 SUPERFAMILY SSF46785 590 648 7.63E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.8E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.8E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.8E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.8E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 Gene3D G3DSA:2.40.30.10 176 287 9.7E-25 T 12-10-2018 YpsIP31758_4114 b5c5ffdaef6191676eb0fbdd3c395eea 657 SUPERFAMILY SSF52540 2 194 1.94E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 SUPERFAMILY SSF47413 3 60 5.35E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 7.2E-35 T 12-10-2018 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:3.40.50.2300 159 288 8.0E-73 T 12-10-2018 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 SUPERFAMILY SSF53822 63 327 1.85E-71 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:3.40.50.2300 62 307 8.0E-73 T 12-10-2018 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 Gene3D G3DSA:1.10.260.40 2 60 4.4E-21 T 12-10-2018 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 YpsIP31758_0527 3f509d6b5cbc2535e6e96743aa822b72 328 SMART SM00354 2 72 1.0E-23 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 SUPERFAMILY SSF52518 372 559 1.66E-33 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 436 2.8E-142 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Gene3D G3DSA:3.40.50.1220 217 342 8.4E-47 T 12-10-2018 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 2.2E-27 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 PIRSF PIRSF004983 1 564 1.2E-178 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 SUPERFAMILY SSF52518 7 176 5.35E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 394 4.0E-88 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Gene3D G3DSA:3.40.50.970 1 196 2.1E-62 T 12-10-2018 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 559 32.614 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 541 8.7E-8 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_1482 824b9a7b98a9d258c52d5b558bf58b4e 567 Gene3D G3DSA:3.40.50.970 357 562 8.8E-62 T 12-10-2018 YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 Pfam PF03602 Conserved hypothetical protein 95 23 198 5.3E-62 T 12-10-2018 YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 Gene3D G3DSA:3.40.50.150 11 208 2.2E-63 T 12-10-2018 YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 PIRSF PIRSF004553 22 202 3.6E-59 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 135 141 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 SUPERFAMILY SSF53335 22 199 5.58E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0238 a7552cc8a8ec0e5ef82bd40f0a466252 220 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 18 200 1.0E-64 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 Gene3D G3DSA:3.90.190.10 786 956 1.0E-10 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 868 878 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 Pfam PF00782 Dual specificity phosphatase, catalytic domain 833 892 2.0E-9 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 3.4E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 Gene3D G3DSA:2.180.10.10 6 669 4.0E-232 T 12-10-2018 YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 1.8E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0409 0b24a08764130ce42f65e522217c3208 958 SUPERFAMILY SSF52799 769 891 2.72E-12 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 Pfam PF11612 Type II secretion system (T2SS), protein J 59 193 1.4E-23 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 Gene3D G3DSA:2.10.70.20 151 198 3.9E-10 T 12-10-2018 YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 8.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 7.7E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 SUPERFAMILY SSF54523 47 197 6.59E-34 T 12-10-2018 YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 Gene3D G3DSA:3.10.610.10 39 149 3.0E-8 T 12-10-2018 YpsIP31758_0958 e9bb08d0172062d2fac17e456475aa5f 198 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 196 1.6E-31 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YpsIP31758_2689 144f5d8e9c384622a3980269bc9c2707 362 SUPERFAMILY SSF53822 38 345 4.07E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2689 144f5d8e9c384622a3980269bc9c2707 362 Pfam PF13407 Periplasmic binding protein domain 41 303 8.2E-46 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_2689 144f5d8e9c384622a3980269bc9c2707 362 Gene3D G3DSA:3.40.50.2300 47 298 1.1E-51 T 12-10-2018 YpsIP31758_2689 144f5d8e9c384622a3980269bc9c2707 362 Gene3D G3DSA:3.40.50.2300 137 284 1.1E-51 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82714 722 808 1.1E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82693 136 331 3.14E-25 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82714 183 273 2.22E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82866 833 1025 2.35E-38 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82693 565 671 1.52E-29 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.70.1430 39 817 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82693 39 132 7.85E-25 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82866 297 498 3.92E-51 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:1.20.1640.10 513 1021 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.70.1440 669 864 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 SUPERFAMILY SSF82693 672 855 5.41E-23 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 12-10-2018 YpsIP31758_3585 e82f50a10178221f42531c96213962bb 1041 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3934 4126903f045a2e524be204c910a2d7aa 326 Gene3D G3DSA:3.40.50.2000 170 326 2.2E-23 T 12-10-2018 YpsIP31758_3934 4126903f045a2e524be204c910a2d7aa 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 303 3.2E-13 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YpsIP31758_3934 4126903f045a2e524be204c910a2d7aa 326 SUPERFAMILY SSF53756 2 324 4.39E-57 T 12-10-2018 YpsIP31758_3934 4126903f045a2e524be204c910a2d7aa 326 Gene3D G3DSA:3.40.50.2000 1 164 5.6E-20 T 12-10-2018 YpsIP31758_B0136 1263799e7a0f3710acfce7cc058c70cc 342 Gene3D G3DSA:1.10.10.10 16 154 1.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_B0136 1263799e7a0f3710acfce7cc058c70cc 342 Gene3D G3DSA:1.10.10.10 159 259 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_B0136 1263799e7a0f3710acfce7cc058c70cc 342 Pfam PF01051 Initiator Replication protein 18 251 9.3E-51 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 YpsIP31758_B0136 1263799e7a0f3710acfce7cc058c70cc 342 SUPERFAMILY SSF46785 19 146 5.44E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_B0136 1263799e7a0f3710acfce7cc058c70cc 342 SUPERFAMILY SSF46785 146 254 4.9E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Gene3D G3DSA:1.20.58.1510 287 492 1.4E-109 T 12-10-2018 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 7.6E-24 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 SMART SM00382 38 187 3.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Pfam PF12592 Protein of unknown function (DUF3763) 444 496 4.2E-19 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Hamap MF_01625 ATPase RavA [ravA]. 1 507 59.887 T 12-10-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Gene3D G3DSA:1.10.8.300 222 285 1.1E-27 T 12-10-2018 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Gene3D G3DSA:3.40.50.300 1 221 1.2E-61 T 12-10-2018 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 Gene3D G3DSA:2.40.128.430 331 441 1.4E-109 T 12-10-2018 YpsIP31758_0005 aeaac8dd9371cc424229e833af0a399e 512 SUPERFAMILY SSF52540 21 287 8.75E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4095 10095fc80eb07de638e649007089528c 252 SMART SM00382 26 213 5.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4095 10095fc80eb07de638e649007089528c 252 Pfam PF00005 ABC transporter 17 164 5.6E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4095 10095fc80eb07de638e649007089528c 252 SUPERFAMILY SSF52540 1 225 1.1E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4095 10095fc80eb07de638e649007089528c 252 Gene3D G3DSA:3.40.50.300 1 251 1.3E-63 T 12-10-2018 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 Gene3D G3DSA:1.20.1250.20 240 449 1.2E-61 T 12-10-2018 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 Pfam PF07690 Major Facilitator Superfamily 34 400 8.4E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 PIRSF PIRSF002808 5 450 4.5E-173 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 SUPERFAMILY SSF103473 13 441 8.89E-83 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 7.2E-262 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.3E-165 T 12-10-2018 YpsIP31758_0225 40e52b0e57e6e9edd75ae93c3bceb993 450 Gene3D G3DSA:1.20.1250.20 18 226 2.3E-58 T 12-10-2018 YpsIP31758_2711 d4b1b4b00d97f2f6eab6cd834f841afc 602 Gene3D G3DSA:3.40.190.10 29 588 2.7E-223 T 12-10-2018 YpsIP31758_2711 d4b1b4b00d97f2f6eab6cd834f841afc 602 PIRSF PIRSF002741 5 593 7.7E-147 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_2711 d4b1b4b00d97f2f6eab6cd834f841afc 602 Gene3D G3DSA:3.10.105.10 310 568 2.7E-223 T 12-10-2018 YpsIP31758_2711 d4b1b4b00d97f2f6eab6cd834f841afc 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 502 2.1E-76 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_2711 d4b1b4b00d97f2f6eab6cd834f841afc 602 SUPERFAMILY SSF53850 50 591 9.96E-116 T 12-10-2018 YpsIP31758_0874 4cfee0a832a59ae3c69ef3a28221fdda 141 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 5.0E-56 T 12-10-2018 IPR009883 Inner membrane protein YgfX YpsIP31758_0874 4cfee0a832a59ae3c69ef3a28221fdda 141 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 7.0E-52 T 12-10-2018 IPR009883 Inner membrane protein YgfX YpsIP31758_0874 4cfee0a832a59ae3c69ef3a28221fdda 141 PIRSF PIRSF020653 1 139 5.7E-75 T 12-10-2018 IPR009883 Inner membrane protein YgfX YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 ProSitePatterns PS00149 Sulfatases signature 2. 152 162 - T 12-10-2018 IPR024607 Sulfatase, conserved site YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 Gene3D G3DSA:3.30.1120.10 454 518 7.0E-6 T 12-10-2018 YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 Gene3D G3DSA:3.40.720.10 32 447 3.5E-94 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 Pfam PF00884 Sulfatase 35 384 1.7E-93 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 ProSitePatterns PS00523 Sulfatases signature 1. 107 119 - T 12-10-2018 IPR024607 Sulfatase, conserved site YpsIP31758_1263 7b99fe5545e46b75f2591b6e6a64ee63 534 SUPERFAMILY SSF53649 34 510 1.6E-95 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 Gene3D G3DSA:3.30.54.10 174 306 2.9E-122 T 12-10-2018 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 Gene3D G3DSA:3.50.14.10 14 281 2.9E-122 T 12-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 44.126 T 12-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 SUPERFAMILY SSF56596 5 307 4.71E-122 T 12-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 1.1E-137 T 12-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YpsIP31758_1872 eb510a2491f9caef7387de68e3b46187 311 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 7.7E-171 T 12-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YpsIP31758_3707 b3dc011da3b47ecbc881940d77a96666 505 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 4 494 3.6E-184 T 12-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 YpsIP31758_2354 bb12d50d4f3aeba30d1bf2096b86c522 199 Gene3D G3DSA:3.90.79.10 23 198 5.1E-47 T 12-10-2018 YpsIP31758_2354 bb12d50d4f3aeba30d1bf2096b86c522 199 ProSitePatterns PS01293 Nudix CoA signature. 56 76 - T 12-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 YpsIP31758_2354 bb12d50d4f3aeba30d1bf2096b86c522 199 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 4 199 53.074 T 12-10-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 YpsIP31758_2354 bb12d50d4f3aeba30d1bf2096b86c522 199 SUPERFAMILY SSF55811 27 194 6.91E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_2354 bb12d50d4f3aeba30d1bf2096b86c522 199 Pfam PF00293 NUDIX domain 39 152 1.3E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 399 1.4E-24 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 SUPERFAMILY SSF55073 249 405 2.75E-26 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 244 403 4.8E-15 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 Gene3D G3DSA:3.20.20.450 417 667 1.0E-83 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 SMART SM00052 413 658 3.8E-96 T 12-10-2018 IPR001633 EAL domain YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 Gene3D G3DSA:3.30.70.270 239 416 1.4E-30 T 12-10-2018 YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 SUPERFAMILY SSF141868 418 665 1.31E-77 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 SMART SM00267 229 403 1.9E-26 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 155 2.9E-58 T 12-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YpsIP31758_4069 24b1c5eecd66e00b89ef721819c8b843 671 Pfam PF00563 EAL domain 419 653 4.5E-63 T 12-10-2018 IPR001633 EAL domain YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 SMART SM00020 43 273 0.0041 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 Gene3D G3DSA:2.40.10.10 53 160 3.5E-30 T 12-10-2018 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 79 84 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 216 227 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 Gene3D G3DSA:2.40.10.10 38 241 3.5E-30 T 12-10-2018 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 215 227 1.1E-6 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 1.1E-6 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 69 84 1.1E-6 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 Pfam PF00089 Trypsin 47 242 7.4E-13 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YpsIP31758_1818 bda5963bb32a3eab7c30ca6445501dbd 278 SUPERFAMILY SSF50494 33 269 1.2E-31 T 12-10-2018 IPR009003 Peptidase S1, PA clan YpsIP31758_0726 594e51499d159e247d431dd7d01e9091 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.2E-53 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0726 594e51499d159e247d431dd7d01e9091 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 9.5E-57 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0726 594e51499d159e247d431dd7d01e9091 166 PIRSF PIRSF028301 1 165 3.6E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_2511 594e51499d159e247d431dd7d01e9091 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.2E-53 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_2511 594e51499d159e247d431dd7d01e9091 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 9.5E-57 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_2511 594e51499d159e247d431dd7d01e9091 166 PIRSF PIRSF028301 1 165 3.6E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 46.895 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 Pfam PF01979 Amidohydrolase family 15 307 1.1E-18 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 Gene3D G3DSA:3.20.20.140 6 348 1.2E-104 T 12-10-2018 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 8.0E-150 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 SUPERFAMILY SSF51556 6 347 4.3E-145 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_1567 de253c4c5ab208f5ed8da84bd9137825 348 PIRSF PIRSF001237 4 348 2.2E-140 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YpsIP31758_4082 20fcd76036fbbe3a42dfc359870c56ed 487 Pfam PF12146 Serine aminopeptidase, S33 118 237 1.7E-10 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 YpsIP31758_4082 20fcd76036fbbe3a42dfc359870c56ed 487 SUPERFAMILY SSF53474 74 342 1.91E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_4082 20fcd76036fbbe3a42dfc359870c56ed 487 Gene3D G3DSA:3.40.50.1820 107 347 1.4E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 1.3E-86 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Gene3D G3DSA:3.90.1310.10 65 248 7.0E-50 T 12-10-2018 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Gene3D G3DSA:3.30.1390.30 86 161 7.0E-50 T 12-10-2018 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 8.8E-45 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.76 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 Gene3D G3DSA:3.40.710.10 249 618 8.6E-95 T 12-10-2018 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 SUPERFAMILY SSF56519 57 254 5.49E-52 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 SUPERFAMILY SSF56601 255 610 3.76E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_2949 42f654683feb413c86bd533a91b7c097 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 4.5E-236 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_0605 05bb3f5bd4ccf11f358bfdaa0819e409 195 Gene3D G3DSA:1.10.10.10 2 105 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0605 05bb3f5bd4ccf11f358bfdaa0819e409 195 SUPERFAMILY SSF46894 24 99 4.54E-6 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF02096 60Kd inner membrane protein 353 532 1.8E-60 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF14849 YidC periplasmic domain 61 342 9.4E-90 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.5E-29 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.5E-29 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.5E-29 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 Gene3D G3DSA:2.70.98.90 56 332 8.4E-109 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.5E-69 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 2.0E-120 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.628 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_4157 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.3E-105 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 Gene3D G3DSA:3.30.2010.10 79 157 1.1E-6 T 12-10-2018 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 491 40.686 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 Pfam PF01435 Peptidase family M48 78 265 1.1E-27 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 Gene3D G3DSA:1.25.40.10 274 491 4.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 SUPERFAMILY SSF48452 315 440 2.12E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1239 a848068a6878b2e505472565d3b16334 494 Pfam PF14559 Tetratricopeptide repeat 360 425 3.5E-9 T 12-10-2018 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 SUPERFAMILY SSF52218 1 146 2.86E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 51 62 3.0E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 106 125 3.0E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 5 18 3.0E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 82 92 3.0E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 Pfam PF00258 Flavodoxin 7 138 4.4E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YpsIP31758_0001 43a4ab7b81d5c1e934889625011c9261 146 Gene3D G3DSA:3.40.50.360 1 146 3.6E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF13484 4Fe-4S double cluster binding domain 224 288 9.2E-19 T 12-10-2018 YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 347 51.146 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 SUPERFAMILY SSF46548 171 288 5.02E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF08331 Domain of unknown function (DUF1730) 62 128 4.8E-21 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 YpsIP31758_3660 8c0f4d594663a93bff63acf56c95fd88 411 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 380 4.5E-146 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 YpsIP31758_1054 7450947fe154a02532eb73441684f18f 154 SUPERFAMILY SSF53098 3 143 2.02E-58 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_1054 7450947fe154a02532eb73441684f18f 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 38.32 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 YpsIP31758_1054 7450947fe154a02532eb73441684f18f 154 Pfam PF00075 RNase H 3 141 2.6E-53 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 YpsIP31758_1054 7450947fe154a02532eb73441684f18f 154 Gene3D G3DSA:3.30.420.10 1 154 1.8E-60 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 Gene3D G3DSA:3.40.50.300 330 567 1.0E-63 T 12-10-2018 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 Gene3D G3DSA:1.20.1560.10 14 322 5.7E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 SUPERFAMILY SSF90123 16 324 5.76E-42 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 Pfam PF00005 ABC transporter 353 500 1.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 SMART SM00382 362 548 4.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 SUPERFAMILY SSF52540 326 559 1.71E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 561 3.2E-225 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0132 9365c08e4a76012de15d55d9a95f51be 602 Pfam PF00664 ABC transporter transmembrane region 30 287 2.5E-7 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.5E-129 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 1.8E-45 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 SUPERFAMILY SSF55681 13 322 5.36E-82 T 12-10-2018 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 Gene3D G3DSA:3.30.930.10 1 325 8.7E-122 T 12-10-2018 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.575 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.9E-6 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_3665 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.9E-6 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 SMART SM00382 39 226 2.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 Pfam PF02687 FtsX-like permease family 583 671 4.8E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 Pfam PF00005 ABC transporter 30 178 3.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 Gene3D G3DSA:3.40.50.300 8 297 3.3E-70 T 12-10-2018 YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 Pfam PF12704 MacB-like periplasmic core domain 302 519 6.5E-39 T 12-10-2018 IPR025857 MacB-like periplasmic core domain YpsIP31758_1311 c3d461541e39239791d8a3814b7054dd 678 SUPERFAMILY SSF52540 10 241 2.13E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4111 1f5d79ca45449301cd2352d82abda5e4 272 Pfam PF13988 Protein of unknown function (DUF4225) 77 240 3.5E-61 T 12-10-2018 IPR025320 Protein of unknown function DUF4225 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 SUPERFAMILY SSF53659 2 359 1.79E-121 T 12-10-2018 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.1E-134 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.131 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 2.8E-165 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 SMART SM01329 6 355 1.0E-196 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_3406 26d83be806487aa8a57e6da5c40afce9 363 Gene3D G3DSA:3.40.718.10 1 363 2.8E-154 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.1E-135 T 12-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 3.3E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:1.10.287.470 95 186 1.5E-13 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 194 269 1.7E-9 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.50.100 60 94 1.5E-13 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 59 113 1.57E-6 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.30.170 232 355 8.3E-35 T 12-10-2018 YpsIP31758_3201 26394d610b0023b07145eb9ae74686be 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 4.4E-15 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_3163 043eaf2f0ecbf755feb087b9261c125a 209 PIRSF PIRSF006102 3 209 1.8E-70 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_3163 043eaf2f0ecbf755feb087b9261c125a 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.0E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_3163 043eaf2f0ecbf755feb087b9261c125a 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 1.2E-104 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YpsIP31758_3163 043eaf2f0ecbf755feb087b9261c125a 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.87 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.9E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 SUPERFAMILY SSF52172 1 122 1.85E-42 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 Gene3D G3DSA:3.40.50.2300 1 128 4.5E-39 T 12-10-2018 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 SUPERFAMILY SSF46894 128 226 2.47E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 SMART SM00448 1 112 7.3E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 Gene3D G3DSA:1.10.10.10 129 231 3.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 SMART SM00862 150 226 3.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1304 b9e4bd23d207bf545c4da9084d6f1fe8 235 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4163 2beddf47908905267655beefd60bdf97 251 Gene3D G3DSA:1.10.3720.10 22 225 2.1E-45 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4163 2beddf47908905267655beefd60bdf97 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 2.0E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_4163 2beddf47908905267655beefd60bdf97 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 9.2E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4163 2beddf47908905267655beefd60bdf97 251 SUPERFAMILY SSF161098 22 209 2.09E-40 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 SUPERFAMILY SSF46894 132 234 2.3E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 SUPERFAMILY SSF52172 3 126 1.17E-41 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 SMART SM00862 156 232 1.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-40 T 12-10-2018 YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 SMART SM00448 5 116 1.2E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 Gene3D G3DSA:1.10.10.10 130 239 1.5E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3980 c4549875f12caadbd6b16a743806d61f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0395 fd2d8cdb548b706d1150c88cd1b4f619 366 Gene3D G3DSA:3.90.420.10 96 366 1.8E-119 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YpsIP31758_0395 fd2d8cdb548b706d1150c88cd1b4f619 366 SUPERFAMILY SSF56524 103 362 6.54E-93 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YpsIP31758_0395 fd2d8cdb548b706d1150c88cd1b4f619 366 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 38 366 55.554 T 12-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 YpsIP31758_0395 fd2d8cdb548b706d1150c88cd1b4f619 366 Pfam PF00174 Oxidoreductase molybdopterin binding domain 140 299 3.0E-28 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 Gene3D G3DSA:1.10.10.370 39 109 1.6E-32 T 12-10-2018 YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 Pfam PF04358 DsrC like protein 3 109 1.1E-46 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 PIRSF PIRSF006223 2 109 1.5E-47 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 SUPERFAMILY SSF69721 2 109 2.88E-42 T 12-10-2018 IPR025526 DsrC-like domain superfamily YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 Gene3D G3DSA:3.30.1420.10 1 37 2.3E-12 T 12-10-2018 YpsIP31758_2529 f345a070c025c027d7eda26b5e1ab93c 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.5E-51 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 103 278 1.5E-129 T 12-10-2018 YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 29 326 1.5E-129 T 12-10-2018 YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 SUPERFAMILY SSF53850 28 339 3.31E-95 T 12-10-2018 YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 9.2E-128 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 Pfam PF12849 PBP superfamily domain 23 306 5.7E-61 T 12-10-2018 IPR024370 PBP domain YpsIP31758_4171 f80e62d218e1d46734910de6fa285a29 346 PIRSF PIRSF002756 1 338 1.2E-104 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YpsIP31758_3111 d7a1783741c067d5b7e2f27fb4e31da6 306 SUPERFAMILY SSF48576 9 290 2.01E-86 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily YpsIP31758_3111 d7a1783741c067d5b7e2f27fb4e31da6 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site YpsIP31758_3111 d7a1783741c067d5b7e2f27fb4e31da6 306 Gene3D G3DSA:1.10.600.10 8 306 1.5E-106 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily YpsIP31758_3111 d7a1783741c067d5b7e2f27fb4e31da6 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site YpsIP31758_3111 d7a1783741c067d5b7e2f27fb4e31da6 306 Pfam PF00348 Polyprenyl synthetase 38 278 3.8E-57 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.6E-65 T 12-10-2018 IPR023798 Ribosomal protein S7 domain YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 2 155 5.6E-64 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 2.3E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 YpsIP31758_3920 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1022 26f9e63da11e8cd882d54e87d66eed05 165 Gene3D G3DSA:3.30.910.20 21 165 1.6E-49 T 12-10-2018 IPR024930 Skp domain superfamily YpsIP31758_1022 26f9e63da11e8cd882d54e87d66eed05 165 SMART SM00935 12 165 7.4E-57 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 YpsIP31758_1022 26f9e63da11e8cd882d54e87d66eed05 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 1.1E-37 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 YpsIP31758_1022 26f9e63da11e8cd882d54e87d66eed05 165 PIRSF PIRSF002094 1 165 6.3E-63 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 YpsIP31758_1022 26f9e63da11e8cd882d54e87d66eed05 165 SUPERFAMILY SSF111384 22 164 2.22E-39 T 12-10-2018 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF75516 2 162 4.18E-36 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 2.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 2.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 2.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 234 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:3.30.450.80 1 177 7.7E-68 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF46894 178 242 7.14E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 SMART SM00421 179 236 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:1.10.10.10 178 243 4.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1547 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF03472 Autoinducer binding domain 13 157 1.0E-28 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YpsIP31758_0314 0c8564e0c1083e701cf3c77db7618e79 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 490 4.9E-175 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_0314 0c8564e0c1083e701cf3c77db7618e79 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 491 3.7E-210 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_1757 c4fbcc7cef3a456286145a71f42f8ffa 283 Gene3D G3DSA:3.90.1720.10 77 276 5.0E-42 T 12-10-2018 YpsIP31758_1757 c4fbcc7cef3a456286145a71f42f8ffa 283 Pfam PF00877 NlpC/P60 family 165 275 1.2E-31 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YpsIP31758_1757 c4fbcc7cef3a456286145a71f42f8ffa 283 SUPERFAMILY SSF54001 146 277 6.38E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_1440 eb24891342a6691b67a997a39c7b391b 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 4.6E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_1440 eb24891342a6691b67a997a39c7b391b 147 Gene3D G3DSA:3.40.930.10 1 147 3.7E-60 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_1440 eb24891342a6691b67a997a39c7b391b 147 SUPERFAMILY SSF55804 1 145 1.22E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 5.5E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 SUPERFAMILY SSF51735 4 243 2.16E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 Gene3D G3DSA:3.40.50.720 1 244 1.0E-85 T 12-10-2018 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.3E-5 T 12-10-2018 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.1E-65 T 12-10-2018 YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1578 ab8ac175c839dad5143536505f54bf91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 Gene3D G3DSA:3.40.190.10 108 286 1.9E-13 T 12-10-2018 YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 Gene3D G3DSA:3.40.190.10 168 264 1.9E-13 T 12-10-2018 YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-27 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 SUPERFAMILY SSF53850 89 292 2.48E-31 T 12-10-2018 YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 Gene3D G3DSA:1.10.10.10 4 89 5.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1754 e5d7aba020a05973b385849770c21e9d 310 SUPERFAMILY SSF46785 7 88 1.98E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.115 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 Pfam PF05175 Methyltransferase small domain 133 215 1.3E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 PIRSF PIRSF037167 2 307 2.7E-147 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 SUPERFAMILY SSF53335 15 294 3.5E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 Gene3D G3DSA:3.40.50.150 109 277 1.5E-44 T 12-10-2018 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 9.1E-100 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YpsIP31758_1404 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.1E-136 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YpsIP31758_4038 b6e8b24e532302231de03937f643c6cc 256 SUPERFAMILY SSF53335 9 249 1.2E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_4038 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.50.150 60 253 1.9E-73 T 12-10-2018 YpsIP31758_4038 b6e8b24e532302231de03937f643c6cc 256 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 6 251 38.124 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YpsIP31758_4038 b6e8b24e532302231de03937f643c6cc 256 Pfam PF04445 Putative SAM-dependent methyltransferase 22 249 1.1E-107 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YpsIP31758_4038 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.1630.10 4 59 1.2E-28 T 12-10-2018 YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF100950 64 314 1.17E-65 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:1.10.10.60 1 53 3.7E-17 T 12-10-2018 YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF46785 13 55 8.71E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF04198 Putative sugar-binding domain 64 314 1.6E-62 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF01047 MarR family 14 51 9.7E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_3245 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:3.40.50.1360 54 313 1.7E-82 T 12-10-2018 YpsIP31758_1300 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.1E-114 T 12-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 YpsIP31758_1300 b94666000c8716b4c892250dc298b0a2 277 Gene3D G3DSA:1.10.3720.10 14 272 1.5E-69 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1300 b94666000c8716b4c892250dc298b0a2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.4E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1300 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 2.2E-111 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YpsIP31758_1300 b94666000c8716b4c892250dc298b0a2 277 SUPERFAMILY SSF161098 17 264 7.59E-57 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:3.40.50.1000 336 686 5.5E-290 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 1.6E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 1.6E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 1.6E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 1.6E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:1.20.1110.10 69 896 5.5E-290 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81653 128 238 1.23E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 1.7E-42 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00122 E1-E2 ATPase 126 319 4.6E-55 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:3.40.1110.10 349 547 5.5E-290 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 85 3.6E-21 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Gene3D G3DSA:2.70.150.10 33 241 5.5E-290 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.3E-40 T 12-10-2018 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81660 346 544 6.54E-46 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF81665 18 901 5.1E-119 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 98 204 2.9E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 4.9E-35 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 230 360 5.8E-23 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 SUPERFAMILY SSF56784 337 744 7.5E-62 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 SMART SM00831 18 91 7.0E-34 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YpsIP31758_3485 c820b15ed53f4f8d901d4ae6e251c616 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 655 7.8E-24 T 12-10-2018 YpsIP31758_2419 edb48620319abe9bff4adc52b2f1e567 369 SUPERFAMILY SSF51735 2 353 3.87E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2419 edb48620319abe9bff4adc52b2f1e567 369 Gene3D G3DSA:3.40.50.720 1 324 1.2E-46 T 12-10-2018 YpsIP31758_2419 edb48620319abe9bff4adc52b2f1e567 369 Pfam PF07993 Male sterility protein 6 237 5.9E-33 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 Gene3D G3DSA:3.30.70.240 135 203 2.8E-30 T 12-10-2018 YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 1.1E-74 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 SUPERFAMILY SSF54211 2 129 1.44E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 9.1E-29 T 12-10-2018 IPR001498 Impact, N-terminal YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 8.4E-14 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 Gene3D G3DSA:3.30.230.30 1 134 1.1E-52 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YpsIP31758_0285 831446878b1cf76dfd3f34ea1cc3d3d9 203 SUPERFAMILY SSF54980 136 201 1.44E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 SUPERFAMILY SSF51126 77 356 1.91E-69 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05860 haemagglutination activity domain 75 207 1.4E-33 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF13332 Haemagluttinin repeat 2287 2415 2.0E-8 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF13332 Haemagluttinin repeat 2022 2204 8.1E-4 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF13332 Haemagluttinin repeat 2225 2278 0.011 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF13332 Haemagluttinin repeat 2519 2689 1.4E-40 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 5.2E-23 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 1224 1283 0.9 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 666 722 2.2 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 558 607 5.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 918 990 0.0064 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 348 424 2.1 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 1648 1687 15.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 1340 1388 5.8 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 256 341 6.3E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF05594 Haemagluttinin repeat 1399 1458 0.028 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Gene3D G3DSA:2.160.20.10 75 368 1.2E-105 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 SMART SM00912 88 208 8.4E-48 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.0E-6 T 12-10-2018 IPR024973 ESPR domain YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 Pfam PF04829 Pre-toxin domain with VENN motif 3043 3092 2.8E-20 T 12-10-2018 IPR006914 VENN motif-containing domain YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 8.0E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 929 968 2.7E-8 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1445 1477 2.0 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2004 2041 0.052 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 353 0.11 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 582 611 1.1 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1297 1319 1.9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1227 1258 0.0036 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 973 1011 0.0017 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1367 1395 0.16 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 668 699 0.014 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1458 1496 2.5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_0510 478c69d5d911c6a33573b0552bf21a40 3350 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1555 1582 0.32 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 4.1E-62 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 Gene3D G3DSA:3.30.1360.80 1 171 1.9E-73 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 PIRSF PIRSF006160 1 162 6.0E-67 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-84 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.725 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3233 a13cdff49cc1c2efd247d8f22a1b50f9 171 SUPERFAMILY SSF63411 4 162 1.19E-67 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YpsIP31758_0756 d77999a8088ce8d24008e9be0024d065 178 Pfam PF14237 Domain of unknown function (DUF4339) 3 46 2.1E-10 T 12-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 6.0E-71 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 Pfam PF00588 SpoU rRNA Methylase family 2 147 6.0E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 Gene3D G3DSA:3.40.1280.10 1 162 3.7E-77 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 SUPERFAMILY SSF75217 1 157 7.19E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 PIRSF PIRSF029256 1 159 3.8E-71 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 YpsIP31758_0081 3041a067c6432df7fbb21df9ac446e74 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 34.168 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 SUPERFAMILY SSF46565 132 273 8.27E-28 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Pfam PF00226 DnaJ domain 214 273 2.1E-9 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Gene3D G3DSA:1.10.287.110 189 275 4.6E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 276 40.376 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Pfam PF05099 Tellurite resistance protein TerB 44 171 7.3E-12 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 Gene3D G3DSA:1.10.3680.10 35 183 1.2E-20 T 12-10-2018 IPR029024 TerB-like YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 213 231 2.8E-6 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 231 246 2.8E-6 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 PRINTS PR00625 DnaJ domain signature 255 275 2.8E-6 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3440 cb7de3f8ec2d4d8a60df3a172490fc1b 277 SMART SM00271 210 275 3.4E-15 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_2822 dc94ba91d7a80f5f22348ae00ccce591 157 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 24 134 3.0E-59 T 12-10-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 YpsIP31758_2822 dc94ba91d7a80f5f22348ae00ccce591 157 Gene3D G3DSA:1.20.120.1490 56 136 9.2E-30 T 12-10-2018 YpsIP31758_2822 dc94ba91d7a80f5f22348ae00ccce591 157 Pfam PF13801 Heavy-metal resistance 13 132 3.5E-15 T 12-10-2018 IPR025961 Heavy-metal resistance protein YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.10750 573 727 4.6E-94 T 12-10-2018 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF53223 10 161 2.16E-52 T 12-10-2018 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 SMART SM00919 163 401 3.5E-140 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.10380 1 160 3.8E-68 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.10950 447 751 4.6E-94 T 12-10-2018 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 2.1E-99 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 SMART SM01274 18 151 3.6E-79 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 3.1E-17 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 PIRSF PIRSF036684 1 758 0.0 T 12-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF53659 430 755 4.11E-91 T 12-10-2018 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 SUPERFAMILY SSF51735 163 453 1.08E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 5.2E-27 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YpsIP31758_1277 a7b77130531fd282db78f0d059ed665b 759 Gene3D G3DSA:3.40.50.720 161 446 1.3E-81 T 12-10-2018 YpsIP31758_2521 8cfdc9bd6460182c5a2831123dd66e59 174 Pfam PF07977 FabA-like domain 36 165 2.3E-15 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_2521 8cfdc9bd6460182c5a2831123dd66e59 174 SUPERFAMILY SSF54637 32 170 3.55E-27 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_2521 8cfdc9bd6460182c5a2831123dd66e59 174 Gene3D G3DSA:3.10.129.10 25 173 1.6E-33 T 12-10-2018 YpsIP31758_0640 c9fa8f3e5935ce9f57e61531b3e85614 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_0640 c9fa8f3e5935ce9f57e61531b3e85614 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 138 1.3E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_0640 c9fa8f3e5935ce9f57e61531b3e85614 141 Pfam PF00460 Flagella basal body rod protein 8 31 4.8E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_0640 c9fa8f3e5935ce9f57e61531b3e85614 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 139 8.0E-41 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 SUPERFAMILY SSF51658 1 383 2.02E-78 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.7E-211 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 Gene3D G3DSA:3.20.20.150 1 391 1.0E-144 T 12-10-2018 YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 PIRSF PIRSF016049 1 392 8.4E-178 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 397 225.375 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 YpsIP31758_2699 624e914b290a9cf7a4415b9b2e861006 397 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.3E-155 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 YpsIP31758_B0126 a00a0e04d3549f987fdf3d6e8862fe62 171 Gene3D G3DSA:2.40.50.140 3 168 4.2E-17 T 12-10-2018 YpsIP31758_B0126 a00a0e04d3549f987fdf3d6e8862fe62 171 Pfam PF00436 Single-strand binding protein family 5 97 3.1E-8 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 YpsIP31758_B0126 a00a0e04d3549f987fdf3d6e8862fe62 171 SUPERFAMILY SSF50249 4 161 3.77E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3115 1f1db598d4494f6f2a39094d59d20aa0 138 Pfam PF01029 NusB family 7 131 4.9E-37 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YpsIP31758_3115 1f1db598d4494f6f2a39094d59d20aa0 138 Gene3D G3DSA:1.10.940.10 1 138 2.6E-54 T 12-10-2018 IPR035926 NusB-like superfamily YpsIP31758_3115 1f1db598d4494f6f2a39094d59d20aa0 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 4.7E-47 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 YpsIP31758_3115 1f1db598d4494f6f2a39094d59d20aa0 138 SUPERFAMILY SSF48013 3 135 2.49E-44 T 12-10-2018 IPR035926 NusB-like superfamily YpsIP31758_3115 1f1db598d4494f6f2a39094d59d20aa0 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 24.287 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Gene3D G3DSA:3.40.50.1100 35 140 8.3E-114 T 12-10-2018 YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 4.2E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Gene3D G3DSA:3.40.50.1100 8 288 8.3E-114 T 12-10-2018 YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 4.5E-123 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 SUPERFAMILY SSF53686 4 289 3.8E-92 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_1303 c3a051e65a0d1fbc2af5afe7d594b5d6 292 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 4.7E-150 T 12-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YpsIP31758_2797 2a3e03edca5dd2fe89940657b7ff27bc 286 SUPERFAMILY SSF161098 88 274 3.92E-33 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2797 2a3e03edca5dd2fe89940657b7ff27bc 286 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 9.6E-85 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YpsIP31758_2797 2a3e03edca5dd2fe89940657b7ff27bc 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 271 2.3E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2797 2a3e03edca5dd2fe89940657b7ff27bc 286 Gene3D G3DSA:1.10.3720.10 87 284 1.5E-32 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 Gene3D G3DSA:3.40.50.300 28 269 3.2E-81 T 12-10-2018 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 SMART SM00382 59 230 1.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 SUPERFAMILY SSF54752 272 327 1.96E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 212 240 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 129 158 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 299 316 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 167 196 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 245 274 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 PRINTS PR00142 RecA protein signature 95 124 1.2E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 Hamap MF_00268 Protein RecA [recA]. 7 331 50.697 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 Pfam PF00154 recA bacterial DNA recombination protein 9 270 8.3E-141 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 ProSitePatterns PS00321 recA signature. 215 223 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.2E-170 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 SUPERFAMILY SSF52540 6 269 5.12E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3240 ecb51b3dd857407b5eb972e9f1efad70 356 Gene3D G3DSA:3.30.250.10 271 329 1.0E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 1.1E-24 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 Pfam PF00005 ABC transporter 36 192 2.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 1.1E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 SUPERFAMILY SSF52540 45 310 6.74E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 Gene3D G3DSA:3.40.50.300 12 330 6.2E-97 T 12-10-2018 YpsIP31758_1957 373c392a131d8eeab1c95ec776299164 333 SMART SM00382 44 250 4.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2922 ce71427ebb695bc3377af38697cc35b8 224 Gene3D G3DSA:1.10.3720.10 2 224 1.6E-50 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2922 ce71427ebb695bc3377af38697cc35b8 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2922 ce71427ebb695bc3377af38697cc35b8 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.6E-24 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_2922 ce71427ebb695bc3377af38697cc35b8 224 SUPERFAMILY SSF161098 14 209 4.06E-39 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 1 136 1.3E-55 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.2E-48 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3908 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2187 a7b5dbea420936819d7a563dcad4ea5f 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 1.3E-32 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain YpsIP31758_2187 a7b5dbea420936819d7a563dcad4ea5f 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 2.9E-18 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 SUPERFAMILY SSF52279 381 607 3.92E-48 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Pfam PF14310 Fibronectin type III-like domain 641 710 3.8E-17 T 12-10-2018 IPR026891 Fibronectin type III-like domain YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 210 2.1E-20 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 92 108 2.1E-20 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 111 130 2.1E-20 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 264 282 2.1E-20 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 157 173 2.1E-20 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Gene3D G3DSA:3.20.20.300 12 364 4.6E-120 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 SUPERFAMILY SSF51445 3 380 4.74E-110 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 SMART SM01217 641 710 5.9E-26 T 12-10-2018 IPR026891 Fibronectin type III-like domain YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 342 5.6E-76 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Gene3D G3DSA:2.60.40.10 607 720 4.7E-32 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Gene3D G3DSA:3.40.50.1700 367 606 1.4E-66 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_0532 5523b22e946b31e704f9b3d11e7e286a 727 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 604 1.2E-44 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 Gene3D G3DSA:3.40.50.300 6 274 1.6E-60 T 12-10-2018 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF00005 ABC transporter 17 178 4.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 Gene3D G3DSA:3.40.50.300 276 539 1.3E-58 T 12-10-2018 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 SMART SM00382 337 506 1.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 SMART SM00382 26 223 6.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF12848 ABC transporter 217 297 1.2E-28 T 12-10-2018 IPR032781 ABC-transporter extension domain YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 Pfam PF00005 ABC transporter 328 459 2.8E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 SUPERFAMILY SSF52540 294 517 7.96E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3932 1f8bdf9952098fc4a1c342d86194dff8 640 SUPERFAMILY SSF52540 2 255 3.31E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 7.5E-70 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 3.1E-143 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 Gene3D G3DSA:3.40.50.1100 12 306 4.1E-125 T 12-10-2018 YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 6.2E-136 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 SUPERFAMILY SSF53686 4 309 1.57E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YpsIP31758_1318 c2e9418e9419506b0df42d604cb91c23 322 Gene3D G3DSA:3.40.50.1100 43 145 4.1E-125 T 12-10-2018 YpsIP31758_0309 9ca9ec5122d1d1a771d45ebf09fb6499 423 SUPERFAMILY SSF56935 25 423 1.71E-147 T 12-10-2018 YpsIP31758_0309 9ca9ec5122d1d1a771d45ebf09fb6499 423 Pfam PF02264 LamB porin 27 423 4.6E-144 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 YpsIP31758_0309 9ca9ec5122d1d1a771d45ebf09fb6499 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 418 0.0 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 YpsIP31758_0309 9ca9ec5122d1d1a771d45ebf09fb6499 423 Gene3D G3DSA:2.40.170.10 25 423 3.1E-170 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 YpsIP31758_0309 9ca9ec5122d1d1a771d45ebf09fb6499 423 Hamap MF_01301 Maltoporin [lamB]. 3 423 42.99 T 12-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 SUPERFAMILY SSF53720 10 497 4.32E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 Gene3D G3DSA:3.40.605.10 36 491 7.6E-162 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 Pfam PF00171 Aldehyde dehydrogenase family 35 493 1.0E-158 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 Gene3D G3DSA:3.40.309.10 265 463 7.6E-162 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_1862 5bb0ab330a10d66c9f0e45351ae1858f 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_0957 f34ac847203ab1eae58ded3ead1d1793 114 Gene3D G3DSA:3.30.1300.30 22 109 3.5E-17 T 12-10-2018 YpsIP31758_0957 f34ac847203ab1eae58ded3ead1d1793 114 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 1.4E-17 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0957 f34ac847203ab1eae58ded3ead1d1793 114 Pfam PF02501 Type II secretion system (T2SS), protein I 32 109 5.3E-17 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 YpsIP31758_0957 f34ac847203ab1eae58ded3ead1d1793 114 SUPERFAMILY SSF54523 30 110 8.63E-20 T 12-10-2018 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 SUPERFAMILY SSF56801 205 714 1.15E-97 T 12-10-2018 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF13193 AMP-binding enzyme C-terminal domain 631 701 8.3E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF00501 AMP-binding enzyme 231 619 7.0E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 59.806 T 12-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:3.30.300.30 616 715 8.5E-9 T 12-10-2018 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 SMART SM00563 30 140 9.4E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 SUPERFAMILY SSF69593 10 164 7.06E-18 T 12-10-2018 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Pfam PF01553 Acyltransferase 24 136 6.5E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_0975 d9d54ecb6033136d48ba7311ea875f87 718 Gene3D G3DSA:3.40.50.12780 194 614 8.3E-76 T 12-10-2018 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 Pfam PF00005 ABC transporter 369 514 7.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 Gene3D G3DSA:3.40.50.300 337 587 8.0E-69 T 12-10-2018 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 Gene3D G3DSA:1.20.1560.10 2 334 1.5E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 SUPERFAMILY SSF52540 363 582 2.71E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 SUPERFAMILY SSF90123 11 329 4.45E-54 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 SMART SM00382 375 560 2.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 1.5E-206 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 YpsIP31758_2600 d6e4aa72e6d0a64804fecf054cabfc94 588 Pfam PF00664 ABC transporter transmembrane region 26 291 5.2E-38 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2840 9bf3058322254a0708c255366fae9bd2 236 SMART SM00382 26 218 5.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2840 9bf3058322254a0708c255366fae9bd2 236 Gene3D G3DSA:3.40.50.300 1 232 6.6E-51 T 12-10-2018 YpsIP31758_2840 9bf3058322254a0708c255366fae9bd2 236 Pfam PF00005 ABC transporter 19 164 2.1E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2840 9bf3058322254a0708c255366fae9bd2 236 SUPERFAMILY SSF52540 2 227 8.04E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF46689 1 80 9.14E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01380 SIS domain 124 252 2.8E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:3.40.50.10490 95 277 3.9E-43 T 12-10-2018 YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.5E-29 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:1.10.10.10 1 79 4.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2023 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF53697 94 277 1.01E-42 T 12-10-2018 YpsIP31758_1229 98554625f76934e45e01a0a6f7fb5df0 570 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 302 562 5.5E-74 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YpsIP31758_1229 98554625f76934e45e01a0a6f7fb5df0 570 SUPERFAMILY SSF161098 285 553 1.7E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1229 98554625f76934e45e01a0a6f7fb5df0 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 338 566 2.9E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1229 98554625f76934e45e01a0a6f7fb5df0 570 Gene3D G3DSA:1.10.3720.10 313 565 3.9E-32 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1530 8019d31bc7516a99bcf4808b16dff99c 351 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 107 345 3.5E-53 T 12-10-2018 IPR007184 Mannoside phosphorylase YpsIP31758_1530 8019d31bc7516a99bcf4808b16dff99c 351 PIRSF PIRSF016202 3 351 5.5E-115 T 12-10-2018 IPR007184 Mannoside phosphorylase YpsIP31758_1530 8019d31bc7516a99bcf4808b16dff99c 351 SUPERFAMILY SSF75005 2 341 9.42E-77 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.3E-87 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 SUPERFAMILY SSF75217 3 170 5.95E-39 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 PIRSF PIRSF004808 1 246 3.3E-77 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 Gene3D G3DSA:3.40.1280.10 1 164 4.5E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 Gene3D G3DSA:1.10.8.590 167 250 7.1E-33 T 12-10-2018 YpsIP31758_1166 7c491874a5677239767aaee98d5a7fea 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.0E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YpsIP31758_3749 1af4cfc578622f2670cf0f4fb34684bd 856 Pfam PF03272 Putative mucin or carbohydrate-binding module 736 852 2.2E-26 T 12-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain YpsIP31758_3749 1af4cfc578622f2670cf0f4fb34684bd 856 Pfam PF03272 Putative mucin or carbohydrate-binding module 541 652 9.6E-30 T 12-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain YpsIP31758_3749 1af4cfc578622f2670cf0f4fb34684bd 856 SMART SM01276 35 338 2.3E-54 T 12-10-2018 IPR031161 Peptidase family M60 domain YpsIP31758_3749 1af4cfc578622f2670cf0f4fb34684bd 856 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 121 373 1.3E-12 T 12-10-2018 IPR031161 Peptidase family M60 domain YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 Gene3D G3DSA:3.40.710.10 23 308 1.0E-65 T 12-10-2018 YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 2.5E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 2.5E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 2.5E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 265 5.6E-82 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YpsIP31758_2806 765bd8471ba5df7c1003c08a6de3e1ca 311 SUPERFAMILY SSF56601 3 281 2.76E-62 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_3402 10cec8fa6911a4bcb32343b9a17af266 601 Gene3D G3DSA:3.40.50.12780 3 317 1.9E-53 T 12-10-2018 YpsIP31758_3402 10cec8fa6911a4bcb32343b9a17af266 601 Gene3D G3DSA:3.40.50.12780 325 463 2.6E-32 T 12-10-2018 YpsIP31758_3402 10cec8fa6911a4bcb32343b9a17af266 601 Pfam PF00501 AMP-binding enzyme 15 470 2.6E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_3402 10cec8fa6911a4bcb32343b9a17af266 601 SUPERFAMILY SSF56801 8 599 8.77E-110 T 12-10-2018 YpsIP31758_3402 10cec8fa6911a4bcb32343b9a17af266 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_0538 3f8d89bfc1a412000f94c13b1706f7b8 403 SUPERFAMILY SSF53383 43 391 1.58E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0538 3f8d89bfc1a412000f94c13b1706f7b8 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 YpsIP31758_0538 3f8d89bfc1a412000f94c13b1706f7b8 403 Gene3D G3DSA:3.40.640.10 67 289 8.2E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0538 3f8d89bfc1a412000f94c13b1706f7b8 403 Gene3D G3DSA:3.90.1150.10 44 375 8.2E-92 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0538 3f8d89bfc1a412000f94c13b1706f7b8 403 Pfam PF00155 Aminotransferase class I and II 48 387 2.5E-58 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 SUPERFAMILY SSF51182 1 374 5.67E-103 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PIRSF PIRSF001480 1 391 1.4E-107 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 382 1.4E-119 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 Gene3D G3DSA:2.60.120.10 301 382 2.2E-143 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 Pfam PF01238 Phosphomannose isomerase type I 1 355 1.9E-100 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 3.2E-72 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 Gene3D G3DSA:2.60.120.10 6 275 2.2E-143 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1874 7c26055278ea8805adb19de94d8a2250 391 Gene3D G3DSA:1.10.441.10 150 300 2.2E-143 T 12-10-2018 YpsIP31758_2459 e8690e7e13c9d4c5ab28a04b2442750b 393 SUPERFAMILY SSF103473 11 389 6.15E-52 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2459 e8690e7e13c9d4c5ab28a04b2442750b 393 Gene3D G3DSA:1.20.1250.20 5 387 1.3E-46 T 12-10-2018 YpsIP31758_2459 e8690e7e13c9d4c5ab28a04b2442750b 393 Pfam PF07690 Major Facilitator Superfamily 11 352 2.8E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1807 695cc8635005809c5615e7218ed87b65 150 Gene3D G3DSA:2.40.128.270 45 145 7.0E-33 T 12-10-2018 IPR038670 HslJ-like superfamily YpsIP31758_1807 695cc8635005809c5615e7218ed87b65 150 Pfam PF03724 META domain 40 140 7.3E-19 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 Gene3D G3DSA:3.40.1180.10 5 244 3.1E-91 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 SUPERFAMILY SSF64005 14 238 4.71E-86 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.842 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 2.5E-78 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 2.7E-101 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YpsIP31758_1018 b977fb34b6fab30544aae4887916a387 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.2E-36 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF52540 201 452 5.47E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF48024 22 133 3.53E-38 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:1.10.860.10 17 180 2.0E-54 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:3.40.50.300 181 460 9.5E-106 T 12-10-2018 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.2E-111 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 1.3E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3765 a9065623a555437f33290757e7e0479e 468 SMART SM00382 220 426 3.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1592 3903e67b533ac7c213b8ec232422bb81 343 Gene3D G3DSA:3.20.20.300 1 343 5.1E-132 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_1592 3903e67b533ac7c213b8ec232422bb81 343 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YpsIP31758_1592 3903e67b533ac7c213b8ec232422bb81 343 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 292 4.7E-95 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_1592 3903e67b533ac7c213b8ec232422bb81 343 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.68 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YpsIP31758_1592 3903e67b533ac7c213b8ec232422bb81 343 SUPERFAMILY SSF51445 3 317 4.53E-86 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00448 2 115 4.0E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF46894 130 206 4.08E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF52172 1 125 6.97E-28 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00421 143 200 1.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 3.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 3.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 3.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 5.0E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2402 2170942f84359f8a1cae061c5e24ee8f 209 Gene3D G3DSA:3.40.50.12740 2 206 3.1E-55 T 12-10-2018 YpsIP31758_4062 e34e7f18596d8460cd6e10c838b795f1 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_4062 e34e7f18596d8460cd6e10c838b795f1 314 Gene3D G3DSA:3.40.1190.20 1 312 4.1E-87 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_4062 e34e7f18596d8460cd6e10c838b795f1 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 2.3E-68 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_4062 e34e7f18596d8460cd6e10c838b795f1 314 SUPERFAMILY SSF53613 1 307 2.65E-73 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2452 bbb60b141bfe33944b240ec3fbeef41d 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 35.137 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 YpsIP31758_2452 bbb60b141bfe33944b240ec3fbeef41d 193 Gene3D G3DSA:2.70.40.10 1 162 5.7E-52 T 12-10-2018 IPR036157 dUTPase-like superfamily YpsIP31758_2452 bbb60b141bfe33944b240ec3fbeef41d 193 SUPERFAMILY SSF51283 1 193 5.83E-62 T 12-10-2018 IPR036157 dUTPase-like superfamily YpsIP31758_2452 bbb60b141bfe33944b240ec3fbeef41d 193 Pfam PF00692 dUTPase 79 185 1.5E-10 T 12-10-2018 IPR029054 dUTPase-like YpsIP31758_2452 bbb60b141bfe33944b240ec3fbeef41d 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-70 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 Gene3D G3DSA:1.20.140.10 294 472 1.5E-36 T 12-10-2018 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 185 283 1.2E-12 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 293 446 5.3E-29 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 SUPERFAMILY SSF47203 291 451 1.21E-38 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 187 199 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 Gene3D G3DSA:2.40.110.20 134 293 2.2E-54 T 12-10-2018 YpsIP31758_3643 37570989b8e496bc6de8a0f7d9951c7a 547 SUPERFAMILY SSF56645 65 290 5.92E-29 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:3.40.50.2300 168 301 5.5E-58 T 12-10-2018 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 12-10-2018 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 SMART SM00354 12 82 7.1E-29 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 3.8E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 SUPERFAMILY SSF47413 12 70 1.35E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 SUPERFAMILY SSF53822 70 324 1.54E-42 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:3.40.50.2300 74 317 5.5E-58 T 12-10-2018 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 Gene3D G3DSA:1.10.260.40 4 70 1.3E-20 T 12-10-2018 YpsIP31758_1441 5de0cdf8f37a7e2f0fb64b747efaa328 344 Pfam PF13377 Periplasmic binding protein-like domain 179 328 2.5E-26 T 12-10-2018 YpsIP31758_2103 7c84da63e552ea77ff687426ff92d7cb 320 SUPERFAMILY SSF51735 1 319 1.61E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2103 7c84da63e552ea77ff687426ff92d7cb 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 167 1.4E-21 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_2103 7c84da63e552ea77ff687426ff92d7cb 320 Gene3D G3DSA:3.40.50.720 1 320 3.9E-45 T 12-10-2018 YpsIP31758_2461 7f0a287721cb51024bd8d83e486d6d30 231 Pfam PF04172 LrgB-like family 12 223 2.5E-78 T 12-10-2018 IPR007300 CidB/LrgB family YpsIP31758_2461 7f0a287721cb51024bd8d83e486d6d30 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 5.0E-98 T 12-10-2018 IPR005261 Conserved hypothetical protein CHP00659 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 SMART SM00304 158 210 1.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 SUPERFAMILY SSF47384 194 271 1.49E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 Gene3D G3DSA:1.10.287.130 162 272 4.8E-20 T 12-10-2018 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 SMART SM00388 211 271 2.1E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 SUPERFAMILY SSF55874 260 423 9.82E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 Pfam PF00672 HAMP domain 164 206 8.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 3.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 SMART SM00387 315 425 2.5E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 Gene3D G3DSA:3.30.565.10 277 425 1.1E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1825 561efc6a11676460f5d476972d0b36c5 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 1.3E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.3E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.3E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.3E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 Gene3D G3DSA:3.30.565.10 306 458 2.5E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 456 3.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SMART SM00387 346 458 1.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SUPERFAMILY SSF55874 290 456 1.1E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 2.9E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 Pfam PF00672 HAMP domain 184 232 1.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SMART SM00388 237 301 1.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SMART SM00304 184 236 6.8E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 Gene3D G3DSA:1.10.287.130 183 294 2.2E-28 T 12-10-2018 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SUPERFAMILY SSF47384 220 301 1.1E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1211 7568dda51673fd298cd108cd150d525e 461 SUPERFAMILY SSF158472 185 233 2.88E-10 T 12-10-2018 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 8.8E-126 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 Gene3D G3DSA:3.40.50.1580 1 238 3.4E-77 T 12-10-2018 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 Pfam PF01048 Phosphorylase superfamily 15 219 5.9E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.567 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YpsIP31758_3495 f199d897c15ea5d8395d66d6eb8605a6 239 SUPERFAMILY SSF53167 3 234 3.27E-94 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 SUPERFAMILY SSF51735 137 317 8.27E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 SUPERFAMILY SSF52283 1 168 1.11E-58 T 12-10-2018 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-52 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 SMART SM01003 4 137 5.7E-77 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 3.1E-292 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 Gene3D G3DSA:3.40.50.720 137 318 2.1E-164 T 12-10-2018 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 SMART SM01002 146 311 3.2E-85 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 Gene3D G3DSA:3.40.50.720 3 365 2.1E-164 T 12-10-2018 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.9E-75 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 PIRSF PIRSF000203 1 507 2.5E-279 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1830 7e5ae8e599dd371edffe7a3bbf187ebb 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 1.0E-35 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.580.10 56 409 1.8E-151 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PIRSF PIRSF001369 37 426 1.5E-174 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.230.10 267 375 1.8E-151 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 1.5E-132 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:2.20.28.60 1 49 1.2E-20 T 12-10-2018 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 SUPERFAMILY SSF48256 3 421 2.09E-168 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 1.2E-235 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 378 392 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 218 233 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 295 315 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 240 268 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 358 374 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_2886 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 164 177 2.0E-56 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 SUPERFAMILY SSF52283 2 135 1.29E-44 T 12-10-2018 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 Gene3D G3DSA:3.40.50.720 2 317 1.9E-138 T 12-10-2018 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 5.8E-54 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 Gene3D G3DSA:3.40.50.720 102 297 1.9E-138 T 12-10-2018 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 SUPERFAMILY SSF51735 102 298 1.29E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 2.5E-32 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_1808 7b543ff253e8843e6276a36e063fc117 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 6.5E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 6.5E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 6.5E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 6.5E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 Pfam PF13433 Periplasmic binding protein domain 31 406 2.0E-170 T 12-10-2018 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 SUPERFAMILY SSF53822 30 408 1.15E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 Gene3D G3DSA:3.40.50.2300 33 375 4.9E-139 T 12-10-2018 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 Gene3D G3DSA:3.40.50.2300 146 395 4.9E-139 T 12-10-2018 YpsIP31758_2794 792bbfb5cc914e36125f1a0087df679d 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 5.7E-177 T 12-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 SUPERFAMILY SSF51905 1 314 3.8E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.8E-125 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 118 244 4.8E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 9 312 4.8E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.5E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.9E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.9E-41 T 12-10-2018 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-41 T 12-10-2018 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.9E-41 T 12-10-2018 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.9E-41 T 12-10-2018 YpsIP31758_2598 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.9E-41 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 Pfam PF00122 E1-E2 ATPase 115 288 1.1E-31 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 Gene3D G3DSA:2.70.150.20 106 212 7.0E-26 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.101 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 4.4E-36 T 12-10-2018 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 SUPERFAMILY SSF81665 33 305 7.85E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 Gene3D G3DSA:3.40.1110.10 322 457 3.7E-55 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 SUPERFAMILY SSF56784 299 565 1.27E-38 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 SUPERFAMILY SSF81653 115 207 1.7E-20 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 1.1E-33 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 1.3E-48 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YpsIP31758_1106 96b62738f843c2d8070697c165adbd8a 688 SUPERFAMILY SSF81660 322 456 5.89E-37 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 Pfam PF00149 Calcineurin-like phosphoesterase 32 267 6.7E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 251 274 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 436 459 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 223 240 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 291 311 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 30 48 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 PRINTS PR01607 Apyrase family signature 538 557 1.4E-31 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 30 655 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 Gene3D G3DSA:3.60.21.10 24 362 8.8E-149 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 SUPERFAMILY SSF56300 27 361 8.02E-85 T 12-10-2018 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 Gene3D G3DSA:3.90.780.10 408 595 4.0E-50 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 558 5.7E-21 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 ProSitePatterns PS00786 5'-nucleotidase signature 2. 117 128 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 ProSitePatterns PS00785 5'-nucleotidase signature 1. 32 44 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3631 5ed56bb1414231fcb03594368636bcaf 656 SUPERFAMILY SSF55816 363 604 9.03E-38 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 Pfam PF00005 ABC transporter 285 439 4.2E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 Pfam PF00005 ABC transporter 32 181 3.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 SUPERFAMILY SSF52540 262 492 2.25E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 SMART SM00382 294 488 2.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 SMART SM00382 41 228 4.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 SUPERFAMILY SSF52540 15 239 2.39E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 Gene3D G3DSA:3.40.50.300 268 506 8.4E-44 T 12-10-2018 YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 Gene3D G3DSA:3.40.50.300 1 245 4.4E-55 T 12-10-2018 YpsIP31758_1851 c9dc8e45d8758120c7d7e3e6ba783345 512 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:3.30.930.10 65 270 6.3E-75 T 12-10-2018 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 5.9E-24 T 12-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:2.30.30.100 271 313 9.1E-24 T 12-10-2018 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF50037 271 317 6.87E-12 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:1.10.10.10 1 64 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF46785 8 60 1.61E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.6E-24 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.823 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.3E-13 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 7.8E-79 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF55681 71 268 3.23E-59 T 12-10-2018 YpsIP31758_3871 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF08279 HTH domain 14 58 9.6E-10 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:2.20.200.10 96 350 3.2E-132 T 12-10-2018 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 6.1E-112 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 SUPERFAMILY SSF56954 2 462 1.31E-104 T 12-10-2018 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 Gene3D G3DSA:1.20.1600.10 50 461 3.2E-132 T 12-10-2018 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 Pfam PF02321 Outer membrane efflux protein 280 459 1.7E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_3584 855a64ba26f72554917b8c431d2d59e5 468 Pfam PF02321 Outer membrane efflux protein 60 250 7.8E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 SUPERFAMILY SSF55804 500 638 9.81E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 457 6.9E-10 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF02378 Phosphotransferase system, EIIC 18 278 1.1E-20 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 Gene3D G3DSA:3.40.930.10 494 640 3.3E-54 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 Gene3D G3DSA:3.40.50.2300 367 473 4.1E-36 T 12-10-2018 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 543 559 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 637 2.2E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 SUPERFAMILY SSF52794 379 469 3.66E-23 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_4128 8a7385bfb4e103b4100594e58d6c5d0d 643 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 6.5E-182 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:1.10.10.10 1 84 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 SUPERFAMILY SSF46785 1 110 5.14E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Pfam PF03466 LysR substrate binding domain 88 293 2.9E-51 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:3.40.190.10 164 267 1.2E-75 T 12-10-2018 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 SUPERFAMILY SSF53850 89 297 2.33E-45 T 12-10-2018 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:3.40.190.10 91 280 1.2E-75 T 12-10-2018 YpsIP31758_0138 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2094 5c3129ab4a7b53acb03a6fb170124833 219 Pfam PF08242 Methyltransferase domain 54 151 4.7E-9 T 12-10-2018 IPR013217 Methyltransferase type 12 YpsIP31758_2094 5c3129ab4a7b53acb03a6fb170124833 219 SUPERFAMILY SSF53335 36 207 6.52E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2094 5c3129ab4a7b53acb03a6fb170124833 219 Gene3D G3DSA:3.40.50.150 22 207 4.3E-13 T 12-10-2018 YpsIP31758_2094 5c3129ab4a7b53acb03a6fb170124833 219 PIRSF PIRSF011491 1 219 3.8E-96 T 12-10-2018 IPR016584 Methyltransferase VrtF-like YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:1.10.8.280 287 403 1.1E-244 T 12-10-2018 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Pfam PF00005 ABC transporter 623 860 1.8E-8 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.938 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:1.20.1580.10 692 830 2.9E-137 T 12-10-2018 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:3.40.50.300 6 595 1.1E-244 T 12-10-2018 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:3.30.190.20 130 244 1.1E-244 T 12-10-2018 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:1.20.1580.10 90 492 1.1E-244 T 12-10-2018 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 SUPERFAMILY SSF52540 1 569 1.64E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 SUPERFAMILY SSF52540 619 911 1.77E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3761 55017e5ea45009df8227f0723046ecd7 947 Gene3D G3DSA:3.40.50.300 617 936 2.9E-137 T 12-10-2018 YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 Gene3D G3DSA:1.20.81.30 53 170 7.5E-28 T 12-10-2018 YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 2.6E-34 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 2.6E-34 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 161 189 2.6E-34 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 2.6E-34 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 161 189 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 Pfam PF00482 Type II secretion system (T2SS), protein F 67 189 2.8E-29 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 389 1.6E-21 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_0955 6915312caef58e3e7174c3f2b5162bde 400 Gene3D G3DSA:1.20.81.30 253 364 6.4E-22 T 12-10-2018 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 Pfam PF01479 S4 domain 4 44 3.0E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 Gene3D G3DSA:3.10.290.10 1 61 9.4E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 4.2E-63 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.6E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 SMART SM00363 3 74 6.4E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 SUPERFAMILY SSF55174 5 98 2.8E-13 T 12-10-2018 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 SUPERFAMILY SSF55120 69 233 4.52E-45 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1928 3764e6dcd630a440ab1798ecaac12f28 318 Gene3D G3DSA:3.30.2350.10 63 251 8.8E-54 T 12-10-2018 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.40.50.620 30 247 1.2E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 463 547 2.9E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF50715 340 547 9.42E-80 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.90.800.10 101 209 1.2E-106 T 12-10-2018 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 0.0 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:1.10.1160.10 261 339 8.1E-36 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 348 462 2.2E-47 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.715 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.9E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.9E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.9E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.2E-126 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.6E-62 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2907 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF52374 28 346 1.07E-101 T 12-10-2018 YpsIP31758_0340 19b780f3306f3543544988847ab708e5 140 SUPERFAMILY SSF55724 1 137 6.8E-44 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0340 19b780f3306f3543544988847ab708e5 140 Gene3D G3DSA:3.40.1000.10 1 140 1.9E-36 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0340 19b780f3306f3543544988847ab708e5 140 Pfam PF08786 DcrB 6 133 2.6E-36 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_0057 9ab99f9e3e64a0bcb7222fa44029c815 215 SUPERFAMILY SSF53271 2 212 3.98E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_0057 9ab99f9e3e64a0bcb7222fa44029c815 215 Pfam PF00156 Phosphoribosyl transferase domain 49 159 9.7E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_0057 9ab99f9e3e64a0bcb7222fa44029c815 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 35.258 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0057 9ab99f9e3e64a0bcb7222fa44029c815 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.6E-66 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YpsIP31758_0057 9ab99f9e3e64a0bcb7222fa44029c815 215 Gene3D G3DSA:3.40.50.2020 1 213 9.1E-78 T 12-10-2018 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 SUPERFAMILY SSF56935 22 371 1.36E-85 T 12-10-2018 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 323 339 - T 12-10-2018 IPR013793 Porin, Gram-negative type, conserved site YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 Pfam PF00267 Gram-negative porin 27 371 2.7E-139 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 Gene3D G3DSA:2.40.160.10 22 371 9.0E-154 T 12-10-2018 IPR023614 Porin domain superfamily YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 3.2E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 3.2E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 3.2E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 235 247 3.2E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 3.2E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 241 258 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2761 71c389b9a9612cf62fb69342f8efe00b 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 279 298 3.4E-68 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_0599 e407655cbc59e0736e16039815a8418a 428 Pfam PF00437 Type II/IV secretion system protein 74 349 2.8E-80 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0599 e407655cbc59e0736e16039815a8418a 428 SUPERFAMILY SSF52540 55 358 2.7E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0599 e407655cbc59e0736e16039815a8418a 428 Gene3D G3DSA:3.30.450.380 5 168 6.5E-37 T 12-10-2018 YpsIP31758_0599 e407655cbc59e0736e16039815a8418a 428 Gene3D G3DSA:3.40.50.300 171 425 5.3E-72 T 12-10-2018 YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 4.5E-15 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.40.30.10 71 230 3.4E-52 T 12-10-2018 YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF13098 Thioredoxin-like domain 104 227 3.1E-29 T 12-10-2018 IPR012336 Thioredoxin-like fold YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF52833 88 230 1.2E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.10.450.70 22 70 5.4E-24 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 YpsIP31758_0880 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF54423 22 80 1.44E-17 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 YpsIP31758_1382 c49bbace9d7bb79db23669042a943777 180 Pfam PF04011 LemA family 7 174 3.4E-56 T 12-10-2018 IPR007156 LemA YpsIP31758_1382 c49bbace9d7bb79db23669042a943777 180 SUPERFAMILY SSF140478 25 169 2.48E-46 T 12-10-2018 IPR023353 LemA-like domain superfamily YpsIP31758_1382 c49bbace9d7bb79db23669042a943777 180 Gene3D G3DSA:1.20.1440.20 15 180 8.9E-52 T 12-10-2018 IPR023353 LemA-like domain superfamily YpsIP31758_0567 e508b5f5a872c6c13e818d4ac67eda8a 217 SUPERFAMILY SSF55821 7 210 1.01E-84 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YpsIP31758_0567 e508b5f5a872c6c13e818d4ac67eda8a 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.5E-82 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_0567 e508b5f5a872c6c13e818d4ac67eda8a 217 Gene3D G3DSA:3.90.870.10 1 217 1.3E-96 T 12-10-2018 YpsIP31758_0567 e508b5f5a872c6c13e818d4ac67eda8a 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 41.897 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_0567 e508b5f5a872c6c13e818d4ac67eda8a 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 1.8E-79 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 SUPERFAMILY SSF51735 141 305 8.16E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 Gene3D G3DSA:3.40.50.720 153 286 5.4E-120 T 12-10-2018 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 SMART SM00829 12 338 1.6E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.2E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.6E-183 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 SUPERFAMILY SSF50129 1 173 4.26E-54 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.5E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 Gene3D G3DSA:3.90.180.10 21 328 5.4E-120 T 12-10-2018 YpsIP31758_0072 a7d4d9901802bc09e60e3f4fa3408a3d 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.682 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:3.40.50.720 1 180 5.4E-57 T 12-10-2018 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.20.5.320 436 469 4.0E-22 T 12-10-2018 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.5E-52 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF51735 4 172 3.26E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.10.1040.10 181 435 9.3E-112 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 PIRSF PIRSF000109 1 469 3.3E-242 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 SMART SM01350 179 468 1.7E-224 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 5.2E-229 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 2.6E-134 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 YpsIP31758_2436 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF48179 177 468 9.78E-133 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 42.847 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF52540 71 290 4.59E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.40.50.300 69 282 1.9E-38 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.2E-93 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 2.4E-232 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF54211 258 458 2.35E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 3.7E-9 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 Pfam PF13481 AAA domain 88 225 2.3E-13 T 12-10-2018 YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.30.230.10 306 460 2.2E-21 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3492 530293d5077ef74ecf579c674a791268 460 SMART SM00382 94 248 1.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_A0026 da0fe5062fb6a260c1d79324c28f5f9e 873 Pfam PF03432 Relaxase/Mobilisation nuclease domain 13 251 2.3E-46 T 12-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.1E-139 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SUPERFAMILY SSF51604 143 427 1.84E-127 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SMART SM01192 143 430 1.3E-212 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Hamap MF_00318 Enolase [eno]. 2 416 44.11 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PIRSF PIRSF001400 1 429 1.5E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SUPERFAMILY SSF54826 3 138 3.16E-56 T 12-10-2018 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Gene3D G3DSA:3.20.20.120 128 431 7.9E-137 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Gene3D G3DSA:3.30.390.10 3 127 1.0E-54 T 12-10-2018 IPR029017 Enolase-like, N-terminal YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 SMART SM01193 4 134 5.3E-93 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.6E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 3.0E-205 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3316 fc2d8d73fa565bf41d4d47a1a8ba4b3c 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3346 70463a4231b0d363a9bf422c0bb8d309 417 Gene3D G3DSA:3.20.20.370 160 401 1.0E-58 T 12-10-2018 YpsIP31758_3346 70463a4231b0d363a9bf422c0bb8d309 417 Pfam PF01522 Polysaccharide deacetylase 223 361 1.5E-18 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 YpsIP31758_3346 70463a4231b0d363a9bf422c0bb8d309 417 SUPERFAMILY SSF88713 187 383 1.2E-28 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 91 179 4.0E-19 T 12-10-2018 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 5 89 1.8E-25 T 12-10-2018 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 7 85 1.54E-16 T 12-10-2018 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 PIRSF PIRSF028103 5 180 4.6E-64 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 Pfam PF13740 ACT domain 7 82 4.9E-26 T 12-10-2018 YpsIP31758_1246 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 91 188 9.0E-31 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF53850 104 290 1.63E-56 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 PIRSF PIRSF001500 1 379 1.4E-141 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Pfam PF01817 Chorismate mutase type II 10 88 6.6E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF48600 5 91 2.01E-21 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 SUPERFAMILY SSF55021 279 376 1.01E-23 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.40.190.10 107 280 8.2E-56 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 SMART SM00830 10 90 6.1E-23 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Pfam PF00800 Prephenate dehydratase 105 286 3.6E-61 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 9.2E-34 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:1.20.59.10 1 106 2.3E-32 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.30.70.260 290 378 1.2E-23 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 Gene3D G3DSA:3.40.190.10 188 273 8.2E-56 T 12-10-2018 YpsIP31758_3218 2833bbfeabfba3538ea1e8e9752d4067 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 256 372 5.1E-34 T 12-10-2018 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 172 254 3.3E-29 T 12-10-2018 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 4 176 2.06E-36 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF55957 373 456 3.92E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 453 8.8E-11 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.40.120.10 3 145 1.0E-49 T 12-10-2018 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 1.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 5.2E-20 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 132 7.3E-30 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 263 368 9.03E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 6.4E-26 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 SUPERFAMILY SSF53738 153 261 7.46E-27 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YpsIP31758_3037 381e9d10c38e0c3c29d67b80dc058dde 457 Gene3D G3DSA:3.30.310.50 374 456 1.9E-25 T 12-10-2018 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Gene3D G3DSA:3.10.20.310 102 189 4.8E-30 T 12-10-2018 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Pfam PF07244 Surface antigen variable number repeat 190 251 3.1E-7 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Pfam PF01103 Surface antigen 341 575 4.8E-31 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Pfam PF17243 POTRA domain TamA domain 1 26 100 2.4E-20 T 12-10-2018 IPR035243 TamA, POTRA domain 1 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Gene3D G3DSA:3.10.20.310 190 266 2.8E-25 T 12-10-2018 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Gene3D G3DSA:3.10.20.310 21 101 5.4E-31 T 12-10-2018 YpsIP31758_3625 c332cb7528967d202c302a4238848fcf 578 Gene3D G3DSA:2.40.160.50 267 578 6.6E-121 T 12-10-2018 YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF57863 86 173 5.75E-9 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF02565 Recombination protein O C terminal 83 226 5.1E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF11967 Recombination protein O N terminal 4 76 1.0E-22 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 2.3E-38 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF50249 4 75 3.08E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.902 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 Gene3D G3DSA:1.20.1440.120 79 236 1.6E-55 T 12-10-2018 YpsIP31758_1138 d3861ff1b8f3e7303be808201d305a55 241 Gene3D G3DSA:2.40.50.140 1 78 4.5E-33 T 12-10-2018 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 165 183 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 40 55 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 25 40 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 60 75 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 191 209 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 6.2E-88 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 38.471 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_2317 ac71fe9f4fc19cff72639c663339ed6c 369 Pfam PF02119 Flagellar P-ring protein 25 368 6.8E-134 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PIRSF PIRSF000532 1 327 7.8E-124 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 2.6E-82 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 327 44.808 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 Gene3D G3DSA:3.40.50.460 144 253 8.2E-114 T 12-10-2018 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 SUPERFAMILY SSF53784 3 315 1.16E-108 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 Pfam PF00365 Phosphofructokinase 4 277 2.7E-107 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 Gene3D G3DSA:3.40.50.450 4 281 8.2E-114 T 12-10-2018 YpsIP31758_0089 d1228ac925fd8a3e54d81bcd31f2616f 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 1.4E-120 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 90 290 1.9E-30 T 12-10-2018 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 165 269 1.9E-30 T 12-10-2018 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF46785 1 111 8.92E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF53850 89 293 7.72E-33 T 12-10-2018 YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:1.10.10.10 1 83 1.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0162 99529294db5027b3527effe8b96132a3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 445 528 1.8E-20 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 6 97 3.1E-17 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 98 181 4.6E-7 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 358 444 1.6E-22 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 269 357 1.2E-29 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PIRSF PIRSF002111 1 534 6.2E-217 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.3E-236 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 1 112 4.52E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 20 78 6.7E-7 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 279 347 2.8E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 449 520 4.3E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 103 171 6.9E-10 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Pfam PF00575 S1 RNA binding domain 361 434 3.3E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 255 371 1.37E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 275 347 6.5E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 19 87 5.0E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 362 434 1.8E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 103 171 8.1E-9 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 449 520 2.0E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SMART SM00316 190 260 2.8E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 12-10-2018 YpsIP31758_2580 28cdfe915096deec08ff09b71c8d77e3 557 SUPERFAMILY SSF50249 429 533 5.74E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 Gene3D G3DSA:3.90.25.10 193 351 1.4E-169 T 12-10-2018 YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 Gene3D G3DSA:3.40.50.720 5 337 1.4E-169 T 12-10-2018 YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 1.5E-161 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.607 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 2.2E-180 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YpsIP31758_3041 f1e5c710dc7902b7dad4a8754e4aa769 373 SUPERFAMILY SSF51735 3 352 1.57E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 SUPERFAMILY SSF55816 364 542 3.92E-54 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 507 8.8E-35 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 Gene3D G3DSA:3.90.780.10 363 549 4.2E-63 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 1.3E-16 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 32 50 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 283 303 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 484 503 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 207 224 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 417 440 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 PRINTS PR01607 Apyrase family signature 238 261 6.2E-62 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 SUPERFAMILY SSF56300 27 360 2.68E-97 T 12-10-2018 YpsIP31758_3032 44844cde556e3084fe0ee5984db05b6b 551 Gene3D G3DSA:3.60.21.10 26 362 8.9E-132 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF54211 1 181 6.58E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.269 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.7E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.6E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.4E-24 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF55666 153 237 1.27E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site YpsIP31758_0056 f240eaba6b87a5a28847c019df81a221 238 Gene3D G3DSA:3.30.230.70 10 238 6.0E-65 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 Pfam PF01565 FAD binding domain 52 192 2.2E-35 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 Gene3D G3DSA:3.30.465.40 18 206 2.2E-44 T 12-10-2018 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 Gene3D G3DSA:3.30.465.40 240 301 1.4E-5 T 12-10-2018 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 2.0E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.2E-61 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 SUPERFAMILY SSF46548 516 691 1.92E-8 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 SUPERFAMILY SSF56176 18 282 8.36E-53 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_1739 d4c668d6c6bcdfe11467b5aef91e253c 1018 SUPERFAMILY SSF55103 258 542 1.96E-53 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 Pfam PF00318 Ribosomal protein S2 9 224 3.1E-94 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:1.10.287.610 103 150 2.3E-93 T 12-10-2018 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 4.8E-108 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 SUPERFAMILY SSF52313 6 236 7.85E-97 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.585 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1013 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:3.40.50.10490 8 219 2.3E-93 T 12-10-2018 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 SUPERFAMILY SSF53850 1 242 4.93E-73 T 12-10-2018 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 1.6E-90 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 SMART SM00079 22 243 9.2E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 108 201 1.0E-83 T 12-10-2018 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 SMART SM00062 22 241 7.8E-87 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.2E-70 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 26 240 1.0E-83 T 12-10-2018 YpsIP31758_2626 ca1104f7499df044cb9471035057c6ab 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_0730 a696bb5ce58b8c4e56ede3c66882a5e4 578 Pfam PF00691 OmpA family 447 543 6.5E-15 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_0730 a696bb5ce58b8c4e56ede3c66882a5e4 578 Gene3D G3DSA:3.30.1330.60 436 558 2.1E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_0730 a696bb5ce58b8c4e56ede3c66882a5e4 578 SUPERFAMILY SSF103088 427 548 2.22E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 200 5.2E-79 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 SUPERFAMILY SSF52540 2 188 5.84E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 Gene3D G3DSA:3.40.50.300 1 207 1.2E-42 T 12-10-2018 YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 SMART SM00382 26 207 5.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1387 2cf3bb7db27bc47bff5eb5cd429c6c34 218 Pfam PF00005 ABC transporter 18 157 5.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 Pfam PF00267 Gram-negative porin 27 371 1.6E-143 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 Gene3D G3DSA:2.40.160.10 22 371 8.5E-149 T 12-10-2018 IPR023614 Porin domain superfamily YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 SUPERFAMILY SSF56935 22 371 1.57E-79 T 12-10-2018 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 2.4E-64 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 4.9E-18 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.9E-18 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.9E-18 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 4.9E-18 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.9E-18 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2778 a7596a6ce0c9f1c59a6a9eb3feb986e4 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 12-10-2018 IPR013793 Porin, Gram-negative type, conserved site YpsIP31758_1619 e3125ee007fab9070e563a65cbb3ec72 285 Pfam PF05368 NmrA-like family 2 220 1.4E-23 T 12-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 YpsIP31758_1619 e3125ee007fab9070e563a65cbb3ec72 285 Gene3D G3DSA:3.40.50.720 3 267 4.8E-91 T 12-10-2018 YpsIP31758_1619 e3125ee007fab9070e563a65cbb3ec72 285 SUPERFAMILY SSF51735 2 245 8.36E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1619 e3125ee007fab9070e563a65cbb3ec72 285 Gene3D G3DSA:3.90.25.10 137 269 4.8E-91 T 12-10-2018 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 Pfam PF00005 ABC transporter 284 434 7.7E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 SUPERFAMILY SSF52540 10 228 8.1E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 SUPERFAMILY SSF52540 282 484 2.45E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 Gene3D G3DSA:3.40.50.300 257 499 3.0E-41 T 12-10-2018 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 Gene3D G3DSA:3.40.50.300 8 238 2.2E-56 T 12-10-2018 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 Pfam PF00005 ABC transporter 27 169 6.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 SMART SM00382 291 483 2.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3521 91f72430dc7dc66a412fb82056c79a6a 527 SMART SM00382 36 220 3.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3679 dff71fdd4cc4c9250306222190d8bad3 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 3.6E-142 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_3679 dff71fdd4cc4c9250306222190d8bad3 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 3.8E-195 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_3679 dff71fdd4cc4c9250306222190d8bad3 433 PIRSF PIRSF004539 1 433 7.2E-176 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 50.885 T 12-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 Gene3D G3DSA:1.20.1730.10 34 547 7.0E-62 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 12-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 Pfam PF00474 Sodium:solute symporter family 64 470 7.4E-128 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site YpsIP31758_3837 70eacc959700e6634c12b08fc9ec27cf 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 3.9E-63 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2571 fde537e3711c34f9bb5bc0357722fa5e 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.6E-123 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 YpsIP31758_2571 fde537e3711c34f9bb5bc0357722fa5e 250 Gene3D G3DSA:3.90.550.10 1 250 1.3E-100 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2571 fde537e3711c34f9bb5bc0357722fa5e 250 SUPERFAMILY SSF53448 3 247 4.51E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2571 fde537e3711c34f9bb5bc0357722fa5e 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.648 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 YpsIP31758_2571 fde537e3711c34f9bb5bc0357722fa5e 250 Pfam PF02348 Cytidylyltransferase 4 221 4.6E-68 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 Gene3D G3DSA:3.40.430.10 1 160 1.3E-59 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 12-10-2018 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 12-10-2018 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 12-10-2018 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.1E-14 T 12-10-2018 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 PIRSF PIRSF000194 1 160 1.3E-58 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 SUPERFAMILY SSF53597 1 160 1.44E-57 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YpsIP31758_3449 794d6c880217e31ee86c274376a58450 160 Pfam PF00186 Dihydrofolate reductase 3 159 6.1E-59 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 YpsIP31758_0447 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 5 144 8.1E-30 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YpsIP31758_0447 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 3.2E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YpsIP31758_0447 6648d6fb917f2e7e1522a3d21e929031 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 9.6E-89 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 YpsIP31758_0447 6648d6fb917f2e7e1522a3d21e929031 324 Gene3D G3DSA:1.20.58.1130 8 207 2.2E-85 T 12-10-2018 YpsIP31758_0447 6648d6fb917f2e7e1522a3d21e929031 324 Gene3D G3DSA:1.20.1420.30 35 309 2.2E-85 T 12-10-2018 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.1480.10 1 129 2.1E-46 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SMART SM00322 301 358 0.19 T 12-10-2018 IPR004087 K Homology domain GO:0003676 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SMART SM00322 230 293 17.0 T 12-10-2018 IPR004087 K Homology domain GO:0003676 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.039 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF50249 133 199 2.23E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 279 342 6.54E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SMART SM00316 133 200 8.9E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 431 490 2.2E-25 T 12-10-2018 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 202 278 1.18E-28 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 278 346 1.1E-23 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF69705 1 126 5.62E-42 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 6.7E-130 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 199 277 9.5E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 352 421 3.0E-31 T 12-10-2018 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 5.9E-21 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 355 415 1.52E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.7E-9 T 12-10-2018 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:2.40.50.140 135 198 6.8E-19 T 12-10-2018 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Pfam PF08529 NusA N-terminal domain 4 123 8.7E-37 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YpsIP31758_3597 6911cb32b94c96760f650d1285816272 495 Pfam PF13184 NusA-like KH domain 230 297 8.1E-28 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 PIRSF PIRSF006169 1 76 2.3E-36 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 SUPERFAMILY SSF118001 1 71 2.48E-28 T 12-10-2018 IPR036685 YehU-like superfamily YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 1.2E-33 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 9.0E-27 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.09 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 YpsIP31758_3941 29997a20f319fe900db3c6f619c63f97 78 Gene3D G3DSA:1.10.10.610 1 75 7.3E-29 T 12-10-2018 IPR036685 YehU-like superfamily YpsIP31758_0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 SUPERFAMILY SSF53300 323 465 1.26E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 Gene3D G3DSA:3.40.50.410 326 468 9.0E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 SMART SM00327 324 488 1.4E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 Pfam PF05762 VWA domain containing CoxE-like protein 310 441 1.5E-8 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like YpsIP31758_0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 60.3 T 12-10-2018 IPR023481 Uncharacterised protein family ViaA YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 SUPERFAMILY SSF74731 3 117 1.83E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.175 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 Gene3D G3DSA:1.10.1900.20 56 118 2.8E-29 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.2E-53 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 12-10-2018 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 Gene3D G3DSA:1.10.720.90 2 55 5.5E-25 T 12-10-2018 YpsIP31758_1715 1f408ec68b6a84a9184df911d1597b81 118 Pfam PF00453 Ribosomal protein L20 3 109 5.1E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.3E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 4.3E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 4.3E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 4.3E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.5E-65 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_2304 85846acbe2497d1bfa6615f0634ee9e9 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 7.0E-74 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.6E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.6E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 4.6E-11 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 6.4E-11 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 6.4E-11 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 6.4E-11 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 6.4E-11 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Gene3D G3DSA:1.10.10.1100 422 476 9.9E-12 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Gene3D G3DSA:3.50.50.60 110 246 6.5E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 4.2E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PIRSF PIRSF037149 1 834 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 8.8E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 SUPERFAMILY SSF51905 2 310 9.61E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 SUPERFAMILY SSF55124 501 626 9.6E-32 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 9.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-13 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-13 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-13 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-13 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Gene3D G3DSA:3.50.50.60 8 283 6.5E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 Gene3D G3DSA:3.30.413.10 631 788 1.4E-30 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 SUPERFAMILY SSF56014 632 808 1.27E-45 T 12-10-2018 YpsIP31758_3956 d52084d43d1d90d6b4e1b48380291c2e 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.50.1970 450 643 4.2E-58 T 12-10-2018 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:1.20.1090.10 645 865 1.8E-61 T 12-10-2018 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.8E-114 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.309.10 218 404 8.8E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF53720 6 453 2.62E-83 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00171 Aldehyde dehydrogenase family 5 399 1.1E-27 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 PIRSF PIRSF000111 1 866 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF56796 451 864 4.58E-119 T 12-10-2018 YpsIP31758_1963 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.605.10 10 444 8.8E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_3388 92d8af04ecb095805205de0df467b41a 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.7E-134 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3388 92d8af04ecb095805205de0df467b41a 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3388 92d8af04ecb095805205de0df467b41a 400 Pfam PF01098 Cell cycle protein 33 387 4.0E-122 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3388 92d8af04ecb095805205de0df467b41a 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 29 396 42.061 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3431 7acf067fe7a3c8988f9ca605cfa34e42 327 Pfam PF06996 Type VI secretion, TssG 19 312 4.2E-59 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_3431 7acf067fe7a3c8988f9ca605cfa34e42 327 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 312 9.3E-53 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF46785 22 101 7.0E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 108 310 2.6E-39 T 12-10-2018 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 2.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:1.10.10.10 17 105 1.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 Pfam PF03466 LysR substrate binding domain 119 311 1.5E-19 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 189 286 2.6E-39 T 12-10-2018 YpsIP31758_3403 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF53850 108 312 1.71E-42 T 12-10-2018 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 Pfam PF00230 Major intrinsic protein 6 253 1.2E-71 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 7.8E-73 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 6.0E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 Gene3D G3DSA:1.20.1080.10 3 261 6.5E-108 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 YpsIP31758_0102 adf11d43f1c641ac0fa8f4e6857ef64f 282 SUPERFAMILY SSF81338 11 259 8.11E-80 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.844 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 Pfam PF01264 Chorismate synthase 10 345 3.2E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.9E-140 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 Gene3D G3DSA:3.60.150.10 1 360 9.4E-159 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 PIRSF PIRSF001456 3 358 3.1E-142 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_1405 f73ef09bb719d60dd44f64f1c0bf22ef 361 SUPERFAMILY SSF103263 4 351 4.45E-149 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 SMART SM00862 152 228 1.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 SUPERFAMILY SSF52172 2 123 3.7E-36 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 Pfam PF00072 Response regulator receiver domain 5 114 9.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 Gene3D G3DSA:3.40.50.2300 1 131 4.2E-32 T 12-10-2018 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 SMART SM00448 3 114 2.0E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 Gene3D G3DSA:1.10.10.10 132 230 8.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0875 d094c7a6a5fca74079a9053bf4c64cca 232 SUPERFAMILY SSF46894 130 228 2.92E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 Gene3D G3DSA:3.90.950.10 2 189 2.9E-72 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 4.0E-63 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 SUPERFAMILY SSF52972 2 184 2.94E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.197 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 Pfam PF02545 Maf-like protein 4 184 5.7E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_0401 7ad248668a8ac0b339c193b2a9746291 197 PIRSF PIRSF006305 1 191 1.0E-49 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 YpsIP31758_1515 11005b16bc65b231959e2c3cdfd89d27 548 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 498 2.9E-149 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 YpsIP31758_1515 11005b16bc65b231959e2c3cdfd89d27 548 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 12-10-2018 IPR018093 BCCT transporter, conserved site YpsIP31758_1515 11005b16bc65b231959e2c3cdfd89d27 548 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 498 2.3E-116 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.6E-160 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF04055 Radical SAM superfamily 91 251 2.9E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 4.8E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 Gene3D G3DSA:3.20.20.70 82 294 3.7E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 PIRSF PIRSF005963 2 321 5.9E-131 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 SUPERFAMILY SSF102114 53 316 1.7E-68 T 12-10-2018 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.033 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YpsIP31758_2955 c11b031c550889f9fc70034d0cd85dd5 321 SMART SM00729 84 293 1.2E-16 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 Gene3D G3DSA:2.160.20.20 745 927 2.0E-33 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 SUPERFAMILY SSF51126 400 925 8.79E-32 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 SUPERFAMILY SSF103515 942 1259 2.62E-39 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 811 1259 7.0E-79 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 SMART SM00869 980 1244 2.8E-34 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 Pfam PF03797 Autotransporter beta-domain 983 1235 2.2E-34 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0694 a4a6edb1caf9101c3ee584f673d5b6be 1259 Gene3D G3DSA:2.40.128.130 934 1259 1.8E-63 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF52009 293 413 3.66E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:1.10.274.10 190 313 1.1E-55 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.20.20.60 400 741 2.0E-101 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 7.2E-16 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 SMART SM00065 17 164 3.0E-26 T 12-10-2018 IPR003018 GAF domain GO:0005515 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF51621 420 715 4.19E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF01590 GAF domain 18 151 1.5E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 1.5E-130 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 6.1E-103 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.1E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF55781 4 159 1.74E-30 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.30.450.40 1 163 3.7E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 Gene3D G3DSA:3.50.30.10 175 399 1.1E-55 T 12-10-2018 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YpsIP31758_0982 1dfd008513c2d3bdc3abc4d9c39521f4 748 SUPERFAMILY SSF47831 202 309 8.24E-26 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_1556 050464ba680e1101c06d7f8974c80cf9 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 8.0E-102 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_1556 050464ba680e1101c06d7f8974c80cf9 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 305 52.684 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 YpsIP31758_1556 050464ba680e1101c06d7f8974c80cf9 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 3.4E-144 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 YpsIP31758_1556 050464ba680e1101c06d7f8974c80cf9 306 PIRSF PIRSF026649 1 305 1.4E-99 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Gene3D G3DSA:3.20.20.300 29 337 2.0E-109 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Gene3D G3DSA:2.60.40.10 602 717 3.8E-35 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Pfam PF14310 Fibronectin type III-like domain 632 702 9.2E-27 T 12-10-2018 IPR026891 Fibronectin type III-like domain YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 70 86 2.6E-34 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 102 121 2.6E-34 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 179 195 2.6E-34 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 249 267 2.6E-34 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 2.6E-34 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 SUPERFAMILY SSF52279 361 595 7.72E-48 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 328 4.3E-51 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 SUPERFAMILY SSF51445 19 360 5.58E-88 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 SMART SM01217 632 702 5.1E-34 T 12-10-2018 IPR026891 Fibronectin type III-like domain YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Gene3D G3DSA:3.40.50.1700 347 595 1.4E-80 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 361 593 3.6E-50 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YpsIP31758_2994 9006825f340023879f96a5b895c82d17 793 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 249 266 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 Gene3D G3DSA:3.30.420.40 267 520 2.5E-95 T 12-10-2018 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 PIRSF PIRSF000538 33 487 1.8E-45 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 SUPERFAMILY SSF53067 35 275 4.06E-52 T 12-10-2018 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 Hamap MF_01535 Rhamnulokinase [rhaB]. 36 513 54.599 T 12-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 283 465 5.1E-25 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 37 490 3.7E-242 T 12-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 SUPERFAMILY SSF53067 278 496 1.12E-32 T 12-10-2018 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 36 273 4.9E-36 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_3755 bcdd147b9cd9420408ab627a2017cc1a 520 Gene3D G3DSA:3.30.420.40 31 266 3.9E-93 T 12-10-2018 YpsIP31758_0263 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 35 131 8.5E-8 T 12-10-2018 YpsIP31758_0263 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 138 274 9.8E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_0263 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 1 129 4.3E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_0263 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 196 276 1.07E-8 T 12-10-2018 YpsIP31758_0263 19781d4174a80f5aa04856f9ba68b1e2 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.1E-83 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 YpsIP31758_0493 2d8e6e6b30993b267c514eefbcbba6f8 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 495 8.6E-156 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 YpsIP31758_0493 2d8e6e6b30993b267c514eefbcbba6f8 496 Pfam PF08666 SAF domain 11 80 1.4E-11 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 YpsIP31758_0493 2d8e6e6b30993b267c514eefbcbba6f8 496 Gene3D G3DSA:3.90.1210.30 3 85 8.0E-25 T 12-10-2018 YpsIP31758_0493 2d8e6e6b30993b267c514eefbcbba6f8 496 SMART SM00858 11 82 3.9E-12 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 Gene3D G3DSA:3.40.47.10 1 255 3.5E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.2E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.5E-62 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 Gene3D G3DSA:3.40.47.10 261 413 6.0E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.3E-39 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 PIRSF PIRSF000447 1 413 3.6E-203 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.1E-197 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YpsIP31758_1580 72895e21a85263a092bdcfecc16b2d52 413 SUPERFAMILY SSF53901 3 252 1.95E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 2.6E-84 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 Pfam PF00813 FliP family 13 211 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_3814 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 6.0E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2186 5f6bd419d69c73baa2f0d701f54ba648 172 Pfam PF10908 Protein of unknown function (DUF2778) 24 153 2.0E-38 T 12-10-2018 IPR021225 Protein of unknown function DUF2778 YpsIP31758_3483 c0f865ee2a225392a6a5840a371c097f 180 Gene3D G3DSA:3.90.950.10 1 175 8.9E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_3483 c0f865ee2a225392a6a5840a371c097f 180 SUPERFAMILY SSF52972 1 169 2.4E-56 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_3483 c0f865ee2a225392a6a5840a371c097f 180 Pfam PF01931 Protein of unknown function DUF84 7 165 8.0E-52 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YpsIP31758_3483 c0f865ee2a225392a6a5840a371c097f 180 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.112 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase YpsIP31758_3483 c0f865ee2a225392a6a5840a371c097f 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 5.9E-50 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Gene3D G3DSA:1.10.287.950 292 595 1.3E-83 T 12-10-2018 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 SMART SM00283 347 594 1.4E-85 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 SMART SM00304 292 346 5.6E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 SUPERFAMILY SSF58104 314 595 2.75E-70 T 12-10-2018 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Pfam PF00672 HAMP domain 293 341 1.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Pfam PF02743 Cache domain 44 254 4.8E-26 T 12-10-2018 IPR033479 Double Cache domain 1 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Gene3D G3DSA:3.30.450.20 52 265 7.4E-49 T 12-10-2018 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 561 1.7E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 SUPERFAMILY SSF103190 64 177 7.85E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily YpsIP31758_2753 ae412f134b2317a4eba162d0fad4a7fb 595 Gene3D G3DSA:3.30.450.20 64 168 7.4E-49 T 12-10-2018 YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Gene3D G3DSA:1.20.81.30 252 362 2.2E-21 T 12-10-2018 YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 9.6E-19 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 9.6E-19 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.6E-19 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.6E-19 T 12-10-2018 IPR003004 GspF/PilC family YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 1.8E-27 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 1.5E-29 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_3372 b0dc4cd3fcd12ee3fa337f7dd3d14bf1 399 Gene3D G3DSA:1.20.81.30 52 166 2.8E-28 T 12-10-2018 YpsIP31758_1368 1bebe059c5fc59a23d59b04e6584b110 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 494 9.3E-218 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_1368 1bebe059c5fc59a23d59b04e6584b110 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 494 8.1E-191 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 SMART SM00729 23 247 1.5E-39 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 Pfam PF16199 Radical_SAM C-terminal domain 208 281 3.8E-18 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 2.1E-133 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 SUPERFAMILY SSF102114 13 254 6.41E-45 T 12-10-2018 YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 Pfam PF04055 Radical SAM superfamily 43 202 7.6E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_0468 74449291f77437e0b2380e4176fcc083 307 Gene3D G3DSA:3.80.30.20 42 270 4.2E-17 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_3320 8d3dd72aa8614350606ffb75617c6a22 41 Gene3D G3DSA:3.40.50.150 2 34 7.4E-7 T 12-10-2018 YpsIP31758_3320 8d3dd72aa8614350606ffb75617c6a22 41 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 18 28 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site YpsIP31758_3935 24a971eaa5c8051a4efb17decbda0859 282 Gene3D G3DSA:3.60.130.10 1 282 1.9E-97 T 12-10-2018 YpsIP31758_3935 24a971eaa5c8051a4efb17decbda0859 282 SUPERFAMILY SSF51197 7 281 4.03E-94 T 12-10-2018 YpsIP31758_3935 24a971eaa5c8051a4efb17decbda0859 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 8.6E-65 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 YpsIP31758_0286 0cdf38489ee18eb822918506f917c031 483 PIRSF PIRSF006247 1 483 3.5E-182 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 YpsIP31758_0286 0cdf38489ee18eb822918506f917c031 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 3.5E-126 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 YpsIP31758_0286 0cdf38489ee18eb822918506f917c031 483 Pfam PF02386 Cation transport protein 37 477 3.7E-92 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YpsIP31758_B0090 23ab56d9fbfe0d30879b8cb35e181658 283 SMART SM00477 63 264 2.8E-48 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 YpsIP31758_B0090 23ab56d9fbfe0d30879b8cb35e181658 283 Gene3D G3DSA:3.40.570.10 41 283 1.8E-73 T 12-10-2018 YpsIP31758_B0090 23ab56d9fbfe0d30879b8cb35e181658 283 Pfam PF01223 DNA/RNA non-specific endonuclease 47 262 2.7E-43 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 YpsIP31758_B0090 23ab56d9fbfe0d30879b8cb35e181658 283 SMART SM00892 62 264 3.8E-41 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 YpsIP31758_B0090 23ab56d9fbfe0d30879b8cb35e181658 283 SUPERFAMILY SSF54060 46 273 7.06E-49 T 12-10-2018 YpsIP31758_0497 da23ac7e13542e2e8bc4ffcba96f312d 331 SUPERFAMILY SSF51735 2 152 4.76E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0497 da23ac7e13542e2e8bc4ffcba96f312d 331 SUPERFAMILY SSF55347 127 292 6.7E-23 T 12-10-2018 YpsIP31758_0497 da23ac7e13542e2e8bc4ffcba96f312d 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.5E-23 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_0497 da23ac7e13542e2e8bc4ffcba96f312d 331 Gene3D G3DSA:3.30.360.10 135 325 1.0E-50 T 12-10-2018 YpsIP31758_0497 da23ac7e13542e2e8bc4ffcba96f312d 331 Gene3D G3DSA:3.40.50.720 1 134 5.0E-33 T 12-10-2018 YpsIP31758_2554 2bf07ce8cbf51a41d56f63a7f8af67ca 183 Pfam PF07126 Cell-division protein ZapC 3 169 1.3E-68 T 12-10-2018 IPR009809 Cell division protein ZapC YpsIP31758_2554 2bf07ce8cbf51a41d56f63a7f8af67ca 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 42.111 T 12-10-2018 IPR009809 Cell division protein ZapC YpsIP31758_2554 2bf07ce8cbf51a41d56f63a7f8af67ca 183 PIRSF PIRSF010252 1 179 1.5E-60 T 12-10-2018 IPR009809 Cell division protein ZapC YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 12-10-2018 IPR020823 Cell division protein FtsA YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 13 379 1.9E-115 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 300 1.9E-115 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.5E-30 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 197 359 1.9E-115 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.1490.110 87 169 1.9E-115 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.2E-24 T 12-10-2018 YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 12-10-2018 IPR020823 Cell division protein FtsA YpsIP31758_3383 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 1.2E-153 T 12-10-2018 IPR020823 Cell division protein FtsA YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.30.470.10 9 126 1.8E-111 T 12-10-2018 YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 Pfam PF01063 Amino-transferase class IV 35 267 1.3E-48 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.20.10.10 137 288 1.8E-111 T 12-10-2018 YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 4.5E-144 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 YpsIP31758_0156 29517221d8a9ea65eea864c3670fab01 308 SUPERFAMILY SSF56752 6 306 2.09E-105 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 YpsIP31758_2005 19874cec2b421cda76b315b8f201b09d 390 Gene3D G3DSA:1.20.1250.20 1 378 1.3E-25 T 12-10-2018 YpsIP31758_2005 19874cec2b421cda76b315b8f201b09d 390 Pfam PF07690 Major Facilitator Superfamily 10 287 1.3E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2005 19874cec2b421cda76b315b8f201b09d 390 SUPERFAMILY SSF103473 7 388 1.22E-30 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3333 6274842626c88dd6c20ce451b626e804 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3333 6274842626c88dd6c20ce451b626e804 264 SMART SM00382 35 223 4.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3333 6274842626c88dd6c20ce451b626e804 264 SUPERFAMILY SSF52540 13 237 3.15E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3333 6274842626c88dd6c20ce451b626e804 264 Gene3D G3DSA:3.40.50.300 3 257 3.3E-69 T 12-10-2018 YpsIP31758_3333 6274842626c88dd6c20ce451b626e804 264 Pfam PF00005 ABC transporter 26 175 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 178 7.9E-17 T 12-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 149 1.0E-8 T 12-10-2018 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 Pfam PF01928 CYTH domain 9 173 9.0E-23 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 SUPERFAMILY SSF55154 8 177 2.29E-38 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 SMART SM01118 8 179 7.2E-15 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YpsIP31758_2804 c1a6b9b3c5c944f23121d91f496bf76a 179 Gene3D G3DSA:2.40.320.10 1 179 6.0E-48 T 12-10-2018 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 SUPERFAMILY SSF50621 275 408 1.12E-40 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 TIGRFAM TIGR00492 alr: alanine racemase 44 393 1.9E-63 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 Hamap MF_01201 Alanine racemase. 42 408 24.529 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 SMART SM01005 280 408 4.8E-48 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 Gene3D G3DSA:2.40.37.10 45 403 1.4E-125 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 104 122 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 166 178 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 245 272 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 68 84 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 202 213 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 313 328 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 334 351 4.6E-24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 271 6.3E-42 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 Pfam PF00842 Alanine racemase, C-terminal domain 280 405 9.3E-33 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 SUPERFAMILY SSF51419 49 280 2.04E-41 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_1652 14c4cdca4f2a365ffaea98baf9f76d5c 409 Gene3D G3DSA:3.20.20.10 51 268 1.4E-125 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_1637 2a262eaa7f380f31a1f6aa3702301141 433 Pfam PF00691 OmpA family 159 253 3.6E-12 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_1637 2a262eaa7f380f31a1f6aa3702301141 433 Gene3D G3DSA:3.30.1330.60 106 293 2.8E-61 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1637 2a262eaa7f380f31a1f6aa3702301141 433 SUPERFAMILY SSF103088 155 263 1.44E-18 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1637 2a262eaa7f380f31a1f6aa3702301141 433 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 1.0E-18 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 1.4E-62 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 SUPERFAMILY SSF53067 4 249 6.76E-69 T 12-10-2018 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 Gene3D G3DSA:3.30.420.40 1 237 5.9E-79 T 12-10-2018 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 PIRSF PIRSF000538 1 513 1.9E-141 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 Gene3D G3DSA:3.30.420.40 248 509 1.3E-80 T 12-10-2018 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 TIGRFAM TIGR01312 XylB: xylulokinase 5 501 6.1E-146 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 372 392 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 SUPERFAMILY SSF53067 248 506 8.03E-61 T 12-10-2018 YpsIP31758_2691 6c4252331f391ce81aeaa025b3fe4519 517 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 460 1.6E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:1.10.10.10 129 246 4.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF52172 2 127 3.42E-31 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF46894 145 240 1.22E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:3.40.50.2300 1 119 5.0E-28 T 12-10-2018 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.3E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00862 163 239 3.1E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1826 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00448 2 112 6.8E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2517 5ba887914dcdf99a74fef2883af1dec8 239 SUPERFAMILY SSF52096 11 230 2.19E-36 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_2517 5ba887914dcdf99a74fef2883af1dec8 239 Gene3D G3DSA:3.90.226.10 10 230 1.1E-35 T 12-10-2018 YpsIP31758_2517 5ba887914dcdf99a74fef2883af1dec8 239 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 229 3.1E-30 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YpsIP31758_3828 74d8881f14c197ca8068e388888e5c09 73 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 3.9E-24 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 YpsIP31758_3828 74d8881f14c197ca8068e388888e5c09 73 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 1.2E-24 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 Pfam PF00330 Aconitase family (aconitate hydratase) 14 463 1.4E-161 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 201 214 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 125 138 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 88 101 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 114 122 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 215 228 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 405 418 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 292 306 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 139 154 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 349 360 3.3E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 Gene3D G3DSA:3.30.499.20 10 292 2.8E-100 T 12-10-2018 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 Gene3D G3DSA:3.30.499.10 331 476 2.0E-51 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 1.6E-266 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 61.757 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 YpsIP31758_3407 758b3656461bd525d63cf76485fada09 476 SUPERFAMILY SSF53732 7 472 1.31E-168 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 YpsIP31758_2723 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF00884 Sulfatase 260 512 1.6E-25 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_2723 7c256689a7e11381144d3c0de77e31c1 598 Gene3D G3DSA:3.40.720.10 249 522 1.7E-36 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_2723 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 1.5E-107 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal YpsIP31758_2723 7c256689a7e11381144d3c0de77e31c1 598 SUPERFAMILY SSF53649 256 582 4.51E-50 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_2723 7c256689a7e11381144d3c0de77e31c1 598 PIRSF PIRSF004950 6 598 5.3E-244 T 12-10-2018 IPR012159 Inner membrane protein YejM YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 474 4.1E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 SUPERFAMILY SSF55874 324 473 4.58E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 SMART SM00388 252 320 2.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 3.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 SMART SM00387 363 475 4.0E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 Gene3D G3DSA:1.10.287.130 196 316 8.4E-18 T 12-10-2018 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 SUPERFAMILY SSF47384 235 316 4.32E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 Gene3D G3DSA:3.30.565.10 319 474 1.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 6.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 6.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1150 768ea62350ea19ea19a80c07fdc8e90d 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 6.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 266 538 65.191 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 SMART SM00382 336 516 6.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 Gene3D G3DSA:1.20.120.140 240 536 5.6E-117 T 12-10-2018 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 Gene3D G3DSA:3.40.50.300 335 526 5.6E-117 T 12-10-2018 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 511 524 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 SMART SM00962 337 538 1.3E-122 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 SUPERFAMILY SSF52540 334 537 6.46E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 266 537 4.6E-115 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 SUPERFAMILY SSF47364 238 317 3.53E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 Pfam PF02881 SRP54-type protein, helical bundle domain 254 319 6.7E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 SMART SM00963 243 323 5.1E-25 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_0239 6b613b39d306f09a87ef8e60dadb9839 541 Pfam PF00448 SRP54-type protein, GTPase domain 338 537 1.2E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.0E-41 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-28 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 Gene3D G3DSA:3.30.1440.10 1 179 3.7E-81 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 SUPERFAMILY SSF55282 4 179 7.53E-79 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.604 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3902 138f8966827b522aff2eefaac3f66634 179 PIRSF PIRSF002161 1 179 6.2E-66 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 7.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 7.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:1.10.287.470 90 149 2.5E-71 T 12-10-2018 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.420.20 269 350 2.5E-71 T 12-10-2018 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 SUPERFAMILY SSF111369 48 206 5.89E-24 T 12-10-2018 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 1.3E-99 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.30.170 44 268 2.5E-71 T 12-10-2018 YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 248 3.7E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_3513 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.50.100 56 188 2.5E-71 T 12-10-2018 YpsIP31758_3815 2cfde4442aade2eba1c18d1ce44c8464 320 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 242 310 1.8E-13 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) YpsIP31758_3815 2cfde4442aade2eba1c18d1ce44c8464 320 SUPERFAMILY SSF101801 242 313 8.24E-14 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_3815 2cfde4442aade2eba1c18d1ce44c8464 320 Gene3D G3DSA:2.30.330.10 230 314 6.1E-16 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_3815 2cfde4442aade2eba1c18d1ce44c8464 320 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 34 310 4.5E-66 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 YpsIP31758_1289 61276c6abc5eb754ef58c2c31f494a6e 137 SUPERFAMILY SSF101756 40 135 1.96E-35 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily YpsIP31758_1289 61276c6abc5eb754ef58c2c31f494a6e 137 Pfam PF04076 Bacterial OB fold (BOF) protein 31 135 2.0E-34 T 12-10-2018 IPR005220 Bacterial OB-fold YpsIP31758_1289 61276c6abc5eb754ef58c2c31f494a6e 137 Gene3D G3DSA:2.40.50.200 27 137 1.3E-42 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily YpsIP31758_1289 61276c6abc5eb754ef58c2c31f494a6e 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 136 9.2E-40 T 12-10-2018 IPR016052 Bacteriophage 933W, L0136 YpsIP31758_3926 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:1.10.287.460 26 139 7.8E-31 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 YpsIP31758_3926 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 243 3.8E-29 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YpsIP31758_3926 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 30 149 9.9E-38 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YpsIP31758_3926 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:3.10.50.40 140 257 1.1E-42 T 12-10-2018 YpsIP31758_3926 6b0568feadd82f9ded8746f8dcb995e2 266 SUPERFAMILY SSF54534 40 246 2.16E-64 T 12-10-2018 YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 SUPERFAMILY SSF141868 399 631 1.83E-34 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 375 3.0E-22 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 SMART SM00052 392 632 2.9E-24 T 12-10-2018 IPR001633 EAL domain YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 Gene3D G3DSA:3.20.20.450 392 630 6.7E-33 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 SUPERFAMILY SSF55073 230 383 3.92E-19 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 Pfam PF00563 EAL domain 400 627 1.3E-37 T 12-10-2018 IPR001633 EAL domain YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 1.6E-33 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 Gene3D G3DSA:3.30.70.270 207 383 9.9E-22 T 12-10-2018 YpsIP31758_0397 fb3bc295deb09221a95408a7d1b78b23 638 SMART SM00267 213 382 5.6E-17 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_1221 b1eecc2c3e7e595663daff262ca2b1ad 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 271 9.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1221 b1eecc2c3e7e595663daff262ca2b1ad 282 Gene3D G3DSA:1.10.3720.10 19 276 6.1E-58 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1221 b1eecc2c3e7e595663daff262ca2b1ad 282 SUPERFAMILY SSF161098 19 273 1.21E-58 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 1.4E-116 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 Gene3D G3DSA:3.40.718.10 1 417 3.1E-186 T 12-10-2018 YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 1.8E-234 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 SMART SM01329 29 413 1.3E-180 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1615 252d6e8fc421241b257bc9a14720b319 417 SUPERFAMILY SSF53659 4 417 1.69E-148 T 12-10-2018 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 15 342 3.8E-117 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 15 343 42.786 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 Gene3D G3DSA:3.40.50.620 18 341 1.3E-143 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 Pfam PF00579 tRNA synthetases class I (W and Y) 15 297 2.8E-87 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 SUPERFAMILY SSF52374 17 342 9.65E-100 T 12-10-2018 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 Gene3D G3DSA:1.10.240.10 198 310 1.3E-143 T 12-10-2018 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 2.9E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 207 217 2.9E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 2.9E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 2.9E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YpsIP31758_3960 1974733753317285f2fb0ecd12a74aa9 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_0303 addd5a07e6a65e62b6e165a69db113cc 135 PIRSF PIRSF029598 1 135 2.1E-48 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YpsIP31758_0303 addd5a07e6a65e62b6e165a69db113cc 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 6.7E-16 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like YpsIP31758_0303 addd5a07e6a65e62b6e165a69db113cc 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.941 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YpsIP31758_2732 bfc628b2f3d7450ab45bf9c1359c940b 200 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 197 4.9E-40 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF100950 74 233 8.89E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.3E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 Gene3D G3DSA:1.10.10.10 2 57 7.2E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM00420 6 58 1.3E-23 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM01134 73 233 5.7E-64 T 12-10-2018 YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.0E-49 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_2145 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF46785 5 65 7.76E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3968 cb52fabb52df344d9f8f0b6044c5e009 119 Pfam PF10748 Protein of unknown function (DUF2531) 26 98 3.5E-6 T 12-10-2018 IPR019684 HofP protein YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Gene3D G3DSA:3.40.10.10 4 74 1.3E-31 T 12-10-2018 IPR035451 Ada-like domain superfamily YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 SUPERFAMILY SSF46689 81 129 1.03E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Pfam PF02805 Metal binding domain of Ada 8 70 1.6E-31 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 SUPERFAMILY SSF46767 265 347 1.07E-30 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 187 262 2.5E-4 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Gene3D G3DSA:3.30.160.70 177 264 2.3E-31 T 12-10-2018 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 SUPERFAMILY SSF53155 186 264 7.46E-20 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 3.2E-35 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Gene3D G3DSA:1.10.10.60 132 176 9.0E-7 T 12-10-2018 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Gene3D G3DSA:1.10.10.10 265 351 5.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 347 1.2E-31 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 SUPERFAMILY SSF57884 6 88 5.1E-32 T 12-10-2018 IPR035451 Ada-like domain superfamily YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Pfam PF12833 Helix-turn-helix domain 102 179 1.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 Gene3D G3DSA:1.10.10.60 75 131 1.3E-22 T 12-10-2018 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 SMART SM00342 96 178 1.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0082 4e09ab0a94cef391ebe88ef725ab3e11 354 PIRSF PIRSF000409 1 354 1.1E-143 T 12-10-2018 IPR016221 Bifunctional regulatory protein Ada YpsIP31758_0059 951acb8d0671ec1c3b1b9b58500112c4 151 Pfam PF00692 dUTPase 16 149 2.4E-43 T 12-10-2018 IPR029054 dUTPase-like YpsIP31758_0059 951acb8d0671ec1c3b1b9b58500112c4 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.1E-49 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 YpsIP31758_0059 951acb8d0671ec1c3b1b9b58500112c4 151 SUPERFAMILY SSF51283 1 150 6.15E-56 T 12-10-2018 IPR036157 dUTPase-like superfamily YpsIP31758_0059 951acb8d0671ec1c3b1b9b58500112c4 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.47 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 YpsIP31758_0059 951acb8d0671ec1c3b1b9b58500112c4 151 Gene3D G3DSA:2.70.40.10 1 150 6.9E-55 T 12-10-2018 IPR036157 dUTPase-like superfamily YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 SUPERFAMILY SSF51905 4 388 2.72E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 5.1E-140 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 Pfam PF01494 FAD binding domain 5 349 2.1E-29 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 Gene3D G3DSA:3.50.50.60 259 406 1.0E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 Gene3D G3DSA:3.50.50.60 1 227 4.9E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.7E-19 T 12-10-2018 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 3.7E-19 T 12-10-2018 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 3.7E-19 T 12-10-2018 YpsIP31758_0862 a13d5946703f232d9c350190c08bd59f 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 3.7E-19 T 12-10-2018 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 PRINTS PR00762 Chloride channel signature 318 338 3.6E-23 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 PRINTS PR00762 Chloride channel signature 371 390 3.6E-23 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 PRINTS PR00762 Chloride channel signature 154 173 3.6E-23 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 PRINTS PR00762 Chloride channel signature 353 369 3.6E-23 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 PRINTS PR00762 Chloride channel signature 104 123 3.6E-23 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 Gene3D G3DSA:1.10.3080.10 2 414 7.5E-77 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 4 414 40.469 T 12-10-2018 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 Pfam PF00654 Voltage gated chloride channel 65 404 3.3E-76 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YpsIP31758_1867 1f01fa7b93bd7c67b619f5fd5ff5c3de 414 SUPERFAMILY SSF81340 2 413 1.19E-85 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SUPERFAMILY SSF52540 560 852 4.33E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Gene3D G3DSA:3.40.50.300 380 558 1.5E-41 T 12-10-2018 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Gene3D G3DSA:1.10.1780.10 1 161 4.4E-44 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SMART SM01086 782 875 1.4E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Gene3D G3DSA:3.40.50.300 564 780 6.3E-66 T 12-10-2018 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 4.6E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 4.6E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 4.6E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 4.6E-32 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SMART SM00382 234 379 6.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SMART SM00382 611 772 1.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Gene3D G3DSA:1.10.8.60 782 876 7.0E-12 T 12-10-2018 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SUPERFAMILY SSF81923 12 127 6.38E-17 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 3.3E-39 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Gene3D G3DSA:3.40.50.300 186 378 7.7E-63 T 12-10-2018 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 SUPERFAMILY SSF52540 196 531 3.35E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 6.7E-13 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_0732 01e902173177c3578794e7ec0cbb1db8 882 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.1E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_1397 e93be1c55b4daa8bc877f37e168c50c3 421 Gene3D G3DSA:2.40.160.60 26 421 2.7E-142 T 12-10-2018 YpsIP31758_1397 e93be1c55b4daa8bc877f37e168c50c3 421 SUPERFAMILY SSF56935 26 421 4.58E-105 T 12-10-2018 YpsIP31758_1397 e93be1c55b4daa8bc877f37e168c50c3 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 421 6.0E-138 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Pfam PF01330 RuvA N terminal domain 2 62 4.4E-18 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF50249 2 63 9.71E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF46929 159 202 5.36E-10 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-17 T 12-10-2018 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.150.20 67 142 2.7E-30 T 12-10-2018 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 3.0E-67 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.8.10 157 204 7.5E-23 T 12-10-2018 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 108 127 0.15 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 73 92 0.054 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF47781 66 136 6.95E-23 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.583 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Pfam PF07499 RuvA, C-terminal domain 161 202 9.3E-14 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YpsIP31758_2031 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:2.40.50.140 1 66 6.5E-26 T 12-10-2018 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF55347 155 317 4.46E-54 T 12-10-2018 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.8E-51 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 9.5E-185 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.4E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.4E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.4E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.4E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.4E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 PIRSF PIRSF000149 1 337 6.7E-128 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.7E-33 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 SMART SM00846 3 155 3.0E-78 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.406 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.30.360.10 154 318 3.1E-128 T 12-10-2018 YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF51735 1 154 3.96E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0848 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.40.50.720 4 328 3.1E-128 T 12-10-2018 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF50182 114 179 7.52E-17 T 12-10-2018 IPR010920 LSM domain superfamily YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:3.30.70.100 179 273 9.3E-23 T 12-10-2018 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 Pfam PF05552 Conserved TM helix 15 64 5.3E-14 T 12-10-2018 IPR008910 Conserved TM helix YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82689 181 279 9.55E-29 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 Pfam PF00924 Mechanosensitive ion channel 72 268 2.1E-53 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82861 28 112 2.22E-16 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YpsIP31758_0851 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:2.30.30.60 129 177 8.1E-21 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Pfam PF13174 Tetratricopeptide repeat 224 256 1.8E-7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Gene3D G3DSA:1.25.40.10 149 269 1.6E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 3.7E-44 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Gene3D G3DSA:1.20.5.110 35 114 3.1E-32 T 12-10-2018 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Pfam PF16331 TolA binding protein trimerisation 37 110 3.4E-23 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 269 20.217 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 SUPERFAMILY SSF48452 158 262 7.59E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2866 e105e31110324de7f23db9bd07a7766c 269 Pfam PF13432 Tetratricopeptide repeat 158 220 3.6E-10 T 12-10-2018 YpsIP31758_1880 c1fc9ec144254d64f4ae1b354974e6c4 342 PIRSF PIRSF026166 1 335 1.2E-135 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter YpsIP31758_1880 c1fc9ec144254d64f4ae1b354974e6c4 342 Gene3D G3DSA:1.20.1530.20 7 327 3.9E-32 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily YpsIP31758_1880 c1fc9ec144254d64f4ae1b354974e6c4 342 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 2.9E-104 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter YpsIP31758_3793 9ff2065f652337578ec23a3e533f8915 359 PIRSF PIRSF020979 1 359 6.8E-197 T 12-10-2018 IPR011215 Phosphoribosyl transferase YpsIP31758_3793 9ff2065f652337578ec23a3e533f8915 359 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 6.7E-90 T 12-10-2018 IPR011215 Phosphoribosyl transferase YpsIP31758_3793 9ff2065f652337578ec23a3e533f8915 359 Pfam PF15608 PELOTA RNA binding domain 276 357 7.1E-29 T 12-10-2018 IPR028157 PELOTA RNA-binding domain YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 Gene3D G3DSA:3.30.565.10 388 502 4.2E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 SMART SM00387 413 503 6.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 500 1.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 Pfam PF05231 MASE1 7 282 7.1E-17 T 12-10-2018 IPR007895 MASE1 YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 SUPERFAMILY SSF55874 384 500 8.25E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4079 19e9e9b49b1246fb3d6ae1a34996861f 509 Pfam PF07730 Histidine kinase 310 373 6.7E-10 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YpsIP31758_0321 8eea7a8b32721e4f83c5efa965ef8488 255 Gene3D G3DSA:1.25.40.590 31 190 5.2E-51 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_0321 8eea7a8b32721e4f83c5efa965ef8488 255 Pfam PF09850 Type VI secretion system protein DotU 36 238 4.5E-57 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0321 8eea7a8b32721e4f83c5efa965ef8488 255 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 34 243 1.4E-61 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0561 bb4c81410d04d2e9b8eecb0977b1855e 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 1.3E-52 T 12-10-2018 IPR016476 SH3 domain protein YpsIP31758_0561 bb4c81410d04d2e9b8eecb0977b1855e 206 Gene3D G3DSA:2.30.30.40 21 88 5.3E-7 T 12-10-2018 YpsIP31758_0561 bb4c81410d04d2e9b8eecb0977b1855e 206 Pfam PF08239 Bacterial SH3 domain 34 81 8.9E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type YpsIP31758_0561 bb4c81410d04d2e9b8eecb0977b1855e 206 PIRSF PIRSF006158 1 205 2.4E-69 T 12-10-2018 IPR016476 SH3 domain protein YpsIP31758_0561 bb4c81410d04d2e9b8eecb0977b1855e 206 SMART SM00287 23 89 5.7E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 SUPERFAMILY SSF111369 46 231 8.24E-22 T 12-10-2018 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 55.673 T 12-10-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 270 1.5E-31 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Gene3D G3DSA:2.40.50.100 46 191 4.6E-35 T 12-10-2018 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Gene3D G3DSA:1.10.287.470 80 156 4.6E-35 T 12-10-2018 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Pfam PF13437 HlyD family secretion protein 156 240 2.3E-9 T 12-10-2018 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Pfam PF13533 Biotin-lipoyl like 47 95 8.7E-19 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Gene3D G3DSA:2.40.420.20 269 278 4.6E-35 T 12-10-2018 YpsIP31758_0420 6b6510bc523c57fdd14b77ced619e54f 311 Gene3D G3DSA:2.40.30.170 192 268 4.6E-35 T 12-10-2018 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.47 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 PIRSF PIRSF002070 2 163 1.3E-40 T 12-10-2018 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 Pfam PF00436 Single-strand binding protein family 6 112 7.4E-44 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 Gene3D G3DSA:2.40.50.140 2 148 9.3E-54 T 12-10-2018 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 1.0E-61 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 YpsIP31758_3760 610951319ea2fd167b536c244bad4baf 182 SUPERFAMILY SSF50249 4 182 3.77E-63 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1786 f5f42e15e3bf86b2a221bedbae1aaf73 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 8.4E-96 T 12-10-2018 IPR014319 Phage shock protein, PspA YpsIP31758_1786 f5f42e15e3bf86b2a221bedbae1aaf73 221 Pfam PF04012 PspA/IM30 family 2 216 2.6E-46 T 12-10-2018 IPR007157 PspA/IM30 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Gene3D G3DSA:2.60.40.1840 444 545 8.1E-36 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Gene3D G3DSA:2.60.40.1730 15 194 1.7E-71 T 12-10-2018 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Gene3D G3DSA:1.10.390.10 280 443 3.9E-65 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 SUPERFAMILY SSF63737 1 193 2.88E-50 T 12-10-2018 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 SUPERFAMILY SSF55486 204 450 1.76E-74 T 12-10-2018 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Gene3D G3DSA:1.10.1740.60 195 279 5.7E-41 T 12-10-2018 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 7.2E-121 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 2.4E-33 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.4E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.4E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.4E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.4E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.4E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Pfam PF01433 Peptidase family M1 domain 208 439 3.3E-59 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YpsIP31758_2556 6aa78d16bc20e50b3fe245600197ac01 871 Gene3D G3DSA:1.25.50.10 546 870 2.0E-124 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 Gene3D G3DSA:3.40.640.10 34 292 2.9E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.2E-237 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 Pfam PF00266 Aminotransferase class-V 22 388 3.0E-137 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 SUPERFAMILY SSF53383 8 397 7.98E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0998 ee748b8b78b97285999a940f66431406 401 Gene3D G3DSA:3.90.1150.10 22 389 2.9E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1627 20940f7e851da2940206dbd176f66a2f 177 Pfam PF10777 Inner membrane protein YlaC 1 153 2.3E-72 T 12-10-2018 IPR019713 Inner membrane protein YlaC YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PIRSF PIRSF000350 2 472 8.3E-58 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Gene3D G3DSA:3.30.390.30 351 474 4.2E-43 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 463 3.2E-18 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 1.8E-19 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.8E-19 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.8E-19 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.8E-19 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-19 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 SUPERFAMILY SSF51905 1 370 3.55E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.1E-40 T 12-10-2018 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Gene3D G3DSA:3.50.50.60 152 273 7.7E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 SUPERFAMILY SSF55424 353 471 1.72E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 331 1.1E-37 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Gene3D G3DSA:3.50.50.60 7 334 7.7E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0135 42882abc2891298c0839cec716ba2933 487 Gene3D G3DSA:1.10.287.990 37 107 7.7E-95 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_3532 e2b54a51f5784d4bb48a2d948c65dd32 114 SUPERFAMILY SSF52794 4 98 1.92E-28 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_3532 e2b54a51f5784d4bb48a2d948c65dd32 114 Gene3D G3DSA:3.40.50.2300 2 114 2.4E-39 T 12-10-2018 YpsIP31758_3532 e2b54a51f5784d4bb48a2d948c65dd32 114 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 97 3.4E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_3532 e2b54a51f5784d4bb48a2d948c65dd32 114 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 86 4.1E-25 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 197 293 9.9E-17 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 SUPERFAMILY SSF51197 16 305 1.24E-81 T 12-10-2018 YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 Gene3D G3DSA:2.60.120.330 13 337 1.4E-84 T 12-10-2018 IPR027443 Isopenicillin N synthase-like YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 25 148 7.5E-36 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 PRINTS PR00682 Isopenicillin N synthase signature 47 64 3.8E-11 T 12-10-2018 YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 PRINTS PR00682 Isopenicillin N synthase signature 254 280 3.8E-11 T 12-10-2018 YpsIP31758_2663 2b0308560f66e23b5b8f324a8e29d5f9 355 PRINTS PR00682 Isopenicillin N synthase signature 218 239 3.8E-11 T 12-10-2018 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 SUPERFAMILY SSF74653 174 241 1.29E-18 T 12-10-2018 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 179 249 3.7E-18 T 12-10-2018 IPR006260 TonB/TolA, C-terminal YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 Gene3D G3DSA:3.30.2420.10 168 256 2.1E-28 T 12-10-2018 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 178 239 6.0E-16 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 Pfam PF16031 TonB N-terminal region 36 175 6.1E-21 T 12-10-2018 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 194 212 8.1E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 173 194 8.1E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 213 230 8.1E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YpsIP31758_1946 c5de06c85d8b29013ddae0625b8ea14d 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 105 115 8.1E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YpsIP31758_4073 d1d999c08d6135b2936d866075a4f8a0 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4073 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 7.1E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4073 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 7.4E-14 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YpsIP31758_4073 d1d999c08d6135b2936d866075a4f8a0 300 Gene3D G3DSA:1.10.3720.10 88 295 9.2E-24 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 SUPERFAMILY SSF64288 63 240 6.75E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 5.5E-86 T 12-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 Gene3D G3DSA:1.10.10.10 10 75 1.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.1E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 SMART SM00866 96 236 8.7E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 Pfam PF07702 UTRA domain 96 235 3.5E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 SMART SM00345 17 75 4.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 SUPERFAMILY SSF46785 8 83 2.91E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 Gene3D G3DSA:3.40.1410.10 84 241 1.6E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.3E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3559 0e20380dc70423de4954168cb6553437 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.3E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SUPERFAMILY SSF158472 186 230 6.02E-5 T 12-10-2018 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SMART SM00387 347 458 5.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SUPERFAMILY SSF55874 293 449 3.54E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 Pfam PF00672 HAMP domain 185 231 3.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SMART SM00304 184 237 1.5E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 304 2.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 454 5.6E-121 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 Gene3D G3DSA:3.30.565.10 310 459 1.9E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 449 8.7E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SUPERFAMILY SSF47384 221 305 4.71E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 Gene3D G3DSA:1.10.287.130 188 304 3.7E-23 T 12-10-2018 YpsIP31758_2085 c2ff33e8c5445fb31f0e3b7a9c5f51a9 461 SMART SM00388 238 304 1.4E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3577 5abf2d8ad3f3fc3327bb29102755f8c6 672 Pfam PF05426 Alginate lyase 101 267 1.1E-4 T 12-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YpsIP31758_3577 5abf2d8ad3f3fc3327bb29102755f8c6 672 Gene3D G3DSA:2.70.98.70 366 669 1.8E-40 T 12-10-2018 YpsIP31758_3577 5abf2d8ad3f3fc3327bb29102755f8c6 672 Gene3D G3DSA:1.50.10.100 59 352 1.5E-68 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_3577 5abf2d8ad3f3fc3327bb29102755f8c6 672 SUPERFAMILY SSF48230 13 328 3.2E-35 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_3577 5abf2d8ad3f3fc3327bb29102755f8c6 672 Pfam PF07940 Heparinase II/III-like protein 368 514 3.2E-19 T 12-10-2018 IPR012480 Heparinase II/III-like GO:0016829 YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 314 4.6E-25 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 SUPERFAMILY SSF51735 103 284 2.86E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 Gene3D G3DSA:3.40.50.720 15 309 1.0E-109 T 12-10-2018 YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 Gene3D G3DSA:3.40.50.720 103 286 1.0E-109 T 12-10-2018 YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 SUPERFAMILY SSF52283 5 137 1.59E-30 T 12-10-2018 YpsIP31758_1475 f0d4306d5dbc08bb9e2d1e633910c53d 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 1.0E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 SUPERFAMILY SSF48024 13 120 4.18E-33 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 Pfam PF03796 DnaB-like helicase C terminal domain 186 444 2.5E-94 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 SUPERFAMILY SSF52540 184 437 3.3E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 446 1.0E-146 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 Gene3D G3DSA:1.10.860.10 12 164 1.9E-45 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 Pfam PF00772 DnaB-like helicase N terminal domain 14 111 7.0E-31 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YpsIP31758_3747 9032d4dfa5565d71cf2171775cb455f5 453 Gene3D G3DSA:3.40.50.300 165 448 2.1E-90 T 12-10-2018 YpsIP31758_1819 d3669ab1cf6eb47398e2e85e278c67ba 94 ProDom PD580032 SHOCK ACID PRECURSOR SIGNAL 3D-STRUCTURE RESPONSE STRESS SECRETED 1 93 7.0E-18 T 12-10-2018 YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.5E-89 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 SUPERFAMILY SSF160467 5 92 8.89E-9 T 12-10-2018 YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 1.1E-66 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 SUPERFAMILY SSF50891 88 214 4.55E-44 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 Gene3D G3DSA:2.40.100.10 87 217 1.5E-53 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_1115 dc546c8638cda6e304e1fdfcf9bb52ee 218 SMART SM00796 4 202 1.3E-89 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D YpsIP31758_2255 bba318e8d59d26d4c87a289382df2b95 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 111 2.0E-49 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC YpsIP31758_2255 bba318e8d59d26d4c87a289382df2b95 113 Pfam PF06942 GlpM protein 5 111 2.7E-50 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC YpsIP31758_2339 5b2acd55de23bff5385453ae4cdd0754 128 SUPERFAMILY SSF81296 30 128 3.01E-27 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_2339 5b2acd55de23bff5385453ae4cdd0754 128 Gene3D G3DSA:2.60.40.1220 30 128 4.1E-27 T 12-10-2018 YpsIP31758_2339 5b2acd55de23bff5385453ae4cdd0754 128 Pfam PF04234 CopC domain 31 127 3.0E-24 T 12-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 SUPERFAMILY SSF46785 1 83 3.93E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 Pfam PF03466 LysR substrate binding domain 86 283 2.8E-41 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 Gene3D G3DSA:3.40.190.10 95 276 2.7E-20 T 12-10-2018 YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 Gene3D G3DSA:1.10.10.10 1 84 9.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 SUPERFAMILY SSF53850 86 287 3.08E-31 T 12-10-2018 YpsIP31758_2150 9f2ef4f7b41fae1cb61d1e89d5af0bf5 320 Gene3D G3DSA:3.40.190.10 163 265 2.7E-20 T 12-10-2018 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 111 232 3.49E-52 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 103 372 2.1E-180 T 12-10-2018 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.7E-199 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 11 270 2.1E-180 T 12-10-2018 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.731 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 5 233 2.1E-180 T 12-10-2018 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 PIRSF PIRSF000497 1 381 3.4E-175 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 4.0E-69 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 233 382 7.46E-71 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_0841 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.6E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YpsIP31758_2745 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 6.7E-28 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YpsIP31758_2745 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 PIRSF PIRSF006241 1 261 1.7E-88 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like YpsIP31758_2745 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 SUPERFAMILY SSF51658 1 254 2.21E-71 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_2745 1aa2deb4ada1f4c93c4b0c2ce86453c7 264 Gene3D G3DSA:3.20.20.150 1 261 8.4E-66 T 12-10-2018 YpsIP31758_2212 e62f602163fa7e36bcda37467b9f821a 216 Pfam PF10548 P22AR C-terminal domain 127 191 6.3E-11 T 12-10-2018 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal YpsIP31758_2212 e62f602163fa7e36bcda37467b9f821a 216 Pfam PF02498 BRO family, N-terminal domain 20 107 3.2E-6 T 12-10-2018 IPR003497 BRO N-terminal domain YpsIP31758_2212 e62f602163fa7e36bcda37467b9f821a 216 SMART SM01040 15 112 2.0E-13 T 12-10-2018 IPR003497 BRO N-terminal domain YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 8.1E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF46894 122 194 4.76E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00421 136 193 2.2E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00448 3 113 2.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF52172 2 129 1.57E-24 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_4080 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Gene3D G3DSA:3.40.50.12740 4 195 3.8E-51 T 12-10-2018 YpsIP31758_3705 63ef3b669a3baf1e3942f3abf4225932 948 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 49 314 2.0E-72 T 12-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase YpsIP31758_3705 63ef3b669a3baf1e3942f3abf4225932 948 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 38 928 0.0 T 12-10-2018 IPR022303 Conjugative transfer ATPase YpsIP31758_3705 63ef3b669a3baf1e3942f3abf4225932 948 Gene3D G3DSA:3.40.50.300 482 563 2.0E-7 T 12-10-2018 YpsIP31758_3705 63ef3b669a3baf1e3942f3abf4225932 948 SUPERFAMILY SSF52540 459 854 1.23E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3705 63ef3b669a3baf1e3942f3abf4225932 948 Gene3D G3DSA:3.40.50.300 710 881 4.9E-19 T 12-10-2018 YpsIP31758_1144 02f9d9d2f648956e0e9a43f751fdc45c 215 SUPERFAMILY SSF56784 6 198 7.0E-10 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1144 02f9d9d2f648956e0e9a43f751fdc45c 215 Gene3D G3DSA:3.40.50.1000 13 213 1.1E-13 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1144 02f9d9d2f648956e0e9a43f751fdc45c 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 13 196 1.4E-13 T 12-10-2018 YpsIP31758_1144 02f9d9d2f648956e0e9a43f751fdc45c 215 Gene3D G3DSA:1.20.1440.100 24 97 1.1E-13 T 12-10-2018 YpsIP31758_1144 02f9d9d2f648956e0e9a43f751fdc45c 215 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 6 215 3.1E-135 T 12-10-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YpsIP31758_2992 5ead94724c972a7b0f7b0bb4adfb3b27 735 Pfam PF14351 Domain of unknown function (DUF4401) 394 724 4.7E-55 T 12-10-2018 IPR025513 Domain of unknown function DUF4401 YpsIP31758_2992 5ead94724c972a7b0f7b0bb4adfb3b27 735 Pfam PF09925 Predicted membrane protein (DUF2157) 29 164 1.1E-27 T 12-10-2018 IPR018677 Domain of unknown function DUF2157 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 7 233 1.15E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 254 497 4.6E-43 T 12-10-2018 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 32 222 1.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 282 477 0.0012 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 274 428 2.5E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 23 174 2.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 2 238 3.1E-59 T 12-10-2018 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0365 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 272 488 6.86E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF53187 179 496 4.71E-125 T 12-10-2018 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.0E-33 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.266 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.220.10 1 159 3.3E-59 T 12-10-2018 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 9.2E-123 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.630.10 181 498 1.2E-141 T 12-10-2018 YpsIP31758_3543 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF52949 1 184 4.06E-52 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 3.9E-33 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 Pfam PF00085 Thioredoxin 37 137 8.7E-27 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 SUPERFAMILY SSF52833 25 144 4.32E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 PRINTS PR00421 Thioredoxin family signature 55 63 6.7E-8 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 PRINTS PR00421 Thioredoxin family signature 63 72 6.7E-8 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 PRINTS PR00421 Thioredoxin family signature 103 114 6.7E-8 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 Gene3D G3DSA:3.40.30.10 35 145 1.2E-33 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 Gene3D G3DSA:2.20.28.140 1 34 2.6E-20 T 12-10-2018 YpsIP31758_3204 c713e00a17ac6be304c6f9a693e137a4 145 PIRSF PIRSF000077 35 139 1.4E-29 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YpsIP31758_0323 bd87f8b12b9ccd5d0cccd542b8931d8c 265 SUPERFAMILY SSF46689 203 261 7.62E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0323 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Pfam PF02954 Bacterial regulatory protein, Fis family 221 261 2.5E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0323 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Gene3D G3DSA:1.10.10.60 208 265 6.2E-6 T 12-10-2018 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 SMART SM00490 243 348 2.6E-15 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Gene3D G3DSA:3.40.50.300 200 366 1.3E-50 T 12-10-2018 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Pfam PF08482 ATP-dependent helicase C-terminal 687 819 3.6E-53 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Gene3D G3DSA:1.20.120.1080 391 479 3.2E-10 T 12-10-2018 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 SUPERFAMILY SSF52540 32 359 2.16E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 19 831 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 PIRSF PIRSF005496 14 833 0.0 T 12-10-2018 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Pfam PF04408 Helicase associated domain (HA2) 409 470 1.8E-12 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Pfam PF00270 DEAD/DEAH box helicase 31 182 6.8E-11 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 SMART SM00487 17 206 4.6E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Pfam PF00271 Helicase conserved C-terminal domain 225 347 1.6E-12 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 Gene3D G3DSA:3.40.50.300 5 199 3.3E-54 T 12-10-2018 YpsIP31758_3335 de26657bf7ed6ff6f89a33ad629e6ca7 834 SMART SM00847 408 499 3.6E-15 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 YpsIP31758_0232 e0a23c85c9530c4e3cb040ea36710156 84 Gene3D G3DSA:3.30.110.40 1 80 4.6E-33 T 12-10-2018 IPR036868 TusA-like domain superfamily YpsIP31758_0232 e0a23c85c9530c4e3cb040ea36710156 84 SUPERFAMILY SSF64307 4 80 3.01E-27 T 12-10-2018 IPR036868 TusA-like domain superfamily YpsIP31758_0232 e0a23c85c9530c4e3cb040ea36710156 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain YpsIP31758_0232 e0a23c85c9530c4e3cb040ea36710156 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.742 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 YpsIP31758_0232 e0a23c85c9530c4e3cb040ea36710156 84 Pfam PF01206 Sulfurtransferase TusA 10 79 1.5E-26 T 12-10-2018 IPR001455 TusA-like domain YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 Pfam PF03466 LysR substrate binding domain 97 295 8.2E-28 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 5.3E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 Gene3D G3DSA:3.40.190.10 103 294 6.7E-40 T 12-10-2018 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 Gene3D G3DSA:3.40.190.10 174 276 6.7E-40 T 12-10-2018 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 Gene3D G3DSA:1.10.10.10 6 92 1.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 SUPERFAMILY SSF46785 9 90 9.98E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2826 6ee5d861c0933f186adc5bd0b2dccbfd 297 SUPERFAMILY SSF53850 99 295 4.34E-26 T 12-10-2018 YpsIP31758_2692 0fe6fa8d5a86bc20197d9b30512bc847 498 Gene3D G3DSA:3.40.605.10 36 488 1.4E-167 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2692 0fe6fa8d5a86bc20197d9b30512bc847 498 Pfam PF00171 Aldehyde dehydrogenase family 30 490 8.2E-161 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2692 0fe6fa8d5a86bc20197d9b30512bc847 498 SUPERFAMILY SSF53720 15 490 8.77E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2692 0fe6fa8d5a86bc20197d9b30512bc847 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2692 0fe6fa8d5a86bc20197d9b30512bc847 498 Gene3D G3DSA:3.40.309.10 265 459 1.4E-167 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_3712 006b450c60d9a1735e811f9e109c8ddc 81 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 81 2.5E-29 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 YpsIP31758_3712 006b450c60d9a1735e811f9e109c8ddc 81 Pfam PF11660 Protein of unknown function (DUF3262) 3 79 8.9E-16 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 4.8E-47 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 4.8E-47 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 4.8E-47 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 4.8E-47 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 Pfam PF02308 MgtC family 10 129 1.7E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1632 8fe972eaa7f2ab63e399913e588b9878 232 Gene3D G3DSA:3.30.70.260 142 230 2.3E-13 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 3 495 54.25 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 SUPERFAMILY SSF53067 8 129 2.53E-38 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 Gene3D G3DSA:3.30.420.150 113 290 1.9E-87 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 PIRSF PIRSF001267 1 497 1.0E-180 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 Gene3D G3DSA:3.30.420.40 10 298 1.9E-87 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 Gene3D G3DSA:1.10.3210.10 306 498 2.6E-49 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 301 2.6E-93 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 SUPERFAMILY SSF53067 133 301 4.21E-42 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 SUPERFAMILY SSF109604 308 495 1.48E-44 T 12-10-2018 YpsIP31758_0177 a4772f218516db3cc768517d26206a80 498 Pfam PF02541 Ppx/GppA phosphatase family 22 302 1.7E-96 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 SUPERFAMILY SSF56601 11 285 1.14E-82 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 Gene3D G3DSA:3.40.710.10 27 284 3.1E-92 T 12-10-2018 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 SMART SM00936 285 376 6.2E-31 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 Gene3D G3DSA:2.60.410.10 285 376 1.2E-26 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 SUPERFAMILY SSF69189 285 378 2.55E-24 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 265 5.5E-98 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YpsIP31758_2659 2ff778be744c4f94505f0218112c687e 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 1.6E-21 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_1432 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.7E-19 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 YpsIP31758_1432 7ae49199b636f4e564f0e1649cf5d9e6 302 Gene3D G3DSA:3.40.50.720 2 300 2.6E-75 T 12-10-2018 YpsIP31758_1432 7ae49199b636f4e564f0e1649cf5d9e6 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.2E-114 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 YpsIP31758_1432 7ae49199b636f4e564f0e1649cf5d9e6 302 SUPERFAMILY SSF51735 1 298 8.1E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1432 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.3E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_3719 9dae791a4643cba802a028ed343e1fc5 173 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 70 173 7.5E-41 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 YpsIP31758_3719 9dae791a4643cba802a028ed343e1fc5 173 Pfam PF11072 Protein of unknown function (DUF2859) 27 171 2.0E-47 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 YpsIP31758_1193 82702c272771994e4d23d376b7f16cb6 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.1E-32 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 YpsIP31758_1193 82702c272771994e4d23d376b7f16cb6 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.289 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_1193 82702c272771994e4d23d376b7f16cb6 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.0E-100 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 YpsIP31758_1193 82702c272771994e4d23d376b7f16cb6 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 4.3E-137 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 SUPERFAMILY SSF46785 1 83 1.23E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:1.10.10.10 1 89 1.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 Pfam PF03466 LysR substrate binding domain 89 287 1.5E-42 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:3.40.190.10 90 287 1.5E-63 T 12-10-2018 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 Gene3D G3DSA:3.40.190.10 164 269 1.5E-63 T 12-10-2018 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 SUPERFAMILY SSF53850 91 287 2.05E-36 T 12-10-2018 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.1E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2155 e05ee5d0507bde6d3f4f30e2357bd257 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 Pfam PF00312 Ribosomal protein S15 8 88 3.3E-37 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.924 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 SUPERFAMILY SSF47060 3 89 2.71E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 Gene3D G3DSA:1.10.287.10 2 89 3.7E-37 T 12-10-2018 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.1E-39 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 SMART SM01387 8 88 1.2E-50 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3593 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-40 T 12-10-2018 YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 654 0.0 T 12-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 Pfam PF12696 TraM recognition site of TraD and TraG 505 633 2.4E-11 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 SUPERFAMILY SSF52540 141 656 1.93E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 654 1.8E-272 T 12-10-2018 IPR022458 Conjugative coupling factor TraG/TraD YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 Gene3D G3DSA:3.40.50.300 144 312 1.9E-9 T 12-10-2018 YpsIP31758_3718 d400d91eb0fe941cd687f4c3eb1b9820 706 Gene3D G3DSA:3.40.50.300 416 658 9.5E-28 T 12-10-2018 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 189 3.3E-59 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 Gene3D G3DSA:3.30.360.10 179 479 6.6E-169 T 12-10-2018 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 492 3.8E-200 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 Gene3D G3DSA:3.40.50.720 15 440 6.6E-169 T 12-10-2018 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 1.2E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 1.2E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 1.2E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 1.2E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 1.2E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 SUPERFAMILY SSF55347 179 491 5.56E-113 T 12-10-2018 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 PIRSF PIRSF000110 1 494 3.5E-183 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 SUPERFAMILY SSF51735 4 192 5.77E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 492 91.621 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 491 1.1E-115 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_2022 54e036a702cfd50d244e90f03126030c 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-149 T 12-10-2018 YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PIRSF PIRSF000450 1 308 1.9E-146 T 12-10-2018 IPR033752 MetA family YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.936 T 12-10-2018 IPR033752 MetA family YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.4E-157 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Gene3D G3DSA:3.40.50.880 1 301 4.9E-120 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 SUPERFAMILY SSF52317 17 297 3.82E-100 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0292 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 9.1E-132 T 12-10-2018 IPR033752 MetA family YpsIP31758_1231 9a5654b09eeb99781de5c757f673b323 397 Pfam PF03692 Putative zinc- or iron-chelating domain 17 125 9.4E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein YpsIP31758_1231 9a5654b09eeb99781de5c757f673b323 397 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 230 393 8.0E-95 T 12-10-2018 IPR020193 Flagellin lysine-N-methylase, C-terminal YpsIP31758_0638 c5d9ddca0e861f225d49fd432de79a9c 272 Gene3D G3DSA:2.30.30.760 208 270 9.1E-10 T 12-10-2018 YpsIP31758_0638 c5d9ddca0e861f225d49fd432de79a9c 272 Pfam PF13144 Chaperone for flagella basal body P-ring formation 64 266 2.9E-55 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YpsIP31758_0638 c5d9ddca0e861f225d49fd432de79a9c 272 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 131 266 9.3E-40 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YpsIP31758_0638 c5d9ddca0e861f225d49fd432de79a9c 272 Gene3D G3DSA:3.90.1210.10 144 207 2.7E-5 T 12-10-2018 YpsIP31758_0638 c5d9ddca0e861f225d49fd432de79a9c 272 SMART SM00858 143 205 1.3E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 YpsIP31758_3623 15c00941dae8fa3fcbce1993fe6f1861 118 Gene3D G3DSA:3.10.490.10 1 117 1.0E-40 T 12-10-2018 YpsIP31758_3623 15c00941dae8fa3fcbce1993fe6f1861 118 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.6E-23 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YpsIP31758_3623 15c00941dae8fa3fcbce1993fe6f1861 118 SUPERFAMILY SSF110857 1 112 1.31E-33 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily YpsIP31758_4180 ed2affadf47d099a67b84bf9a92c5180 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-59 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 YpsIP31758_4180 ed2affadf47d099a67b84bf9a92c5180 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily YpsIP31758_4180 ed2affadf47d099a67b84bf9a92c5180 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.319 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YpsIP31758_4180 ed2affadf47d099a67b84bf9a92c5180 156 Gene3D G3DSA:1.20.5.620 62 122 1.6E-24 T 12-10-2018 YpsIP31758_4180 ed2affadf47d099a67b84bf9a92c5180 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.6E-39 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 SMART SM00926 1 54 2.4E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 SUPERFAMILY SSF53706 1 561 7.59E-196 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 1.9E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 SUPERFAMILY SSF50692 564 700 2.71E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Gene3D G3DSA:3.40.50.740 67 530 1.1E-174 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 433 450 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 PIRSF PIRSF000144 55 440 1.2E-60 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 PIRSF PIRSF000144 536 691 8.5 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Gene3D G3DSA:2.40.40.20 571 687 1.5E-40 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Gene3D G3DSA:2.20.25.90 1 55 3.0E-18 T 12-10-2018 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Pfam PF00384 Molybdopterin oxidoreductase 61 486 3.1E-93 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 684 5.3E-270 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 7.3E-28 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_3682 a467e87da9b8aaf6f893259418f6c0db 715 Gene3D G3DSA:3.40.228.10 142 340 1.1E-174 T 12-10-2018 YpsIP31758_3853 8935d167ccd975e3cc251741d0b1ac0a 681 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 162 614 9.8E-223 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YpsIP31758_3853 8935d167ccd975e3cc251741d0b1ac0a 681 Gene3D G3DSA:3.20.20.540 233 546 6.9E-153 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YpsIP31758_3853 8935d167ccd975e3cc251741d0b1ac0a 681 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 162 615 99.448 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YpsIP31758_3853 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF13667 ThiC-associated domain 42 123 4.3E-34 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YpsIP31758_3853 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF01964 Radical SAM ThiC family 163 611 4.3E-199 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.046 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.5E-95 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 SUPERFAMILY SSF51351 1 250 2.23E-90 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 Gene3D G3DSA:3.20.20.70 1 255 5.6E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0096 8bf821008795b685ed755a8dab024242 255 Pfam PF00121 Triosephosphate isomerase 5 246 4.8E-92 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.4E-28 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 SMART SM00905 4 114 3.5E-47 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 SUPERFAMILY SSF55620 1 115 1.67E-36 T 12-10-2018 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 Gene3D G3DSA:3.30.1130.10 1 119 6.7E-46 T 12-10-2018 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.2E-31 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YpsIP31758_0558 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.0E-40 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YpsIP31758_3258 afea9bd9e04fcf181b4a445e2f0e1b8f 226 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 11 226 43.623 T 12-10-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 YpsIP31758_3258 afea9bd9e04fcf181b4a445e2f0e1b8f 226 SUPERFAMILY SSF89155 8 226 1.83E-49 T 12-10-2018 IPR036411 TorD-like superfamily YpsIP31758_3258 afea9bd9e04fcf181b4a445e2f0e1b8f 226 PIRSF PIRSF004690 8 226 1.1E-61 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type YpsIP31758_3258 afea9bd9e04fcf181b4a445e2f0e1b8f 226 Pfam PF02613 Nitrate reductase delta subunit 79 181 6.4E-19 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone YpsIP31758_3258 afea9bd9e04fcf181b4a445e2f0e1b8f 226 Gene3D G3DSA:1.10.3480.10 11 226 7.9E-48 T 12-10-2018 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 Gene3D G3DSA:1.20.1440.90 272 388 7.5E-28 T 12-10-2018 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 SUPERFAMILY SSF51621 6 878 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 9.0E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 1.8E-289 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_0125 7d53a9607e20d65cd05d8d46100188af 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.224 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00958 228 358 8.9E-85 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00957 6 402 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 101 115 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 63 87 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 170 190 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 339 361 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 376 393 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 117 127 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 413 426 1.4E-73 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 416 618 1.06E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 417 620 4.3E-87 T 12-10-2018 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.941 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81767 227 368 6.8E-45 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.2E-39 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF02810 SEC-C motif 884 902 1.1E-10 T 12-10-2018 IPR004027 SEC-C motif YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 22 415 5.4E-176 T 12-10-2018 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07517 SecA DEAD-like domain 7 402 1.0E-131 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 5 415 1.93E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 5.0E-69 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:1.10.3060.10 621 833 4.5E-82 T 12-10-2018 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.90.1440.10 229 368 5.4E-176 T 12-10-2018 YpsIP31758_3378 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81886 620 892 3.66E-84 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 2 89 2.22E-30 T 12-10-2018 IPR036183 YajQ-like superfamily YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.101 T 12-10-2018 IPR007551 Protein of unknown function DUF520 YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.6E-65 T 12-10-2018 IPR007551 Protein of unknown function DUF520 YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.860 98 163 6.9E-32 T 12-10-2018 IPR035571 UPF0234-like, C-terminal YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 91 163 3.14E-29 T 12-10-2018 IPR036183 YajQ-like superfamily YpsIP31758_3104 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.990 9 97 1.8E-32 T 12-10-2018 IPR035570 UPF0234, N-terminal YpsIP31758_0155 1021dc1677af3d1df977afe9ee2bfb49 85 Pfam PF13710 ACT domain 13 73 3.2E-27 T 12-10-2018 YpsIP31758_0155 1021dc1677af3d1df977afe9ee2bfb49 85 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 81 0.009 T 12-10-2018 YpsIP31758_0155 1021dc1677af3d1df977afe9ee2bfb49 85 Gene3D G3DSA:3.30.70.260 1 85 2.0E-8 T 12-10-2018 YpsIP31758_0155 1021dc1677af3d1df977afe9ee2bfb49 85 SUPERFAMILY SSF55021 3 76 2.25E-13 T 12-10-2018 YpsIP31758_0928 c6a9511f0de82bd2b00077dddff9fdb9 192 Gene3D G3DSA:3.40.50.880 1 183 5.3E-41 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0928 c6a9511f0de82bd2b00077dddff9fdb9 192 SUPERFAMILY SSF52317 3 173 4.59E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_0928 c6a9511f0de82bd2b00077dddff9fdb9 192 Pfam PF01965 DJ-1/PfpI family 3 165 3.4E-31 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 SMART SM00487 71 255 2.5E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 SUPERFAMILY SSF52540 70 596 1.03E-109 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 SMART SM00382 88 380 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1291 7.3E-237 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Gene3D G3DSA:3.40.50.300 249 417 1.5E-55 T 12-10-2018 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1292 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Pfam PF00270 DEAD/DEAH box helicase 82 229 5.9E-6 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 3.0E-17 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 1.4E-18 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Gene3D G3DSA:3.40.50.300 24 248 2.5E-74 T 12-10-2018 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Pfam PF00271 Helicase conserved C-terminal domain 282 399 2.0E-11 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 SMART SM00847 460 554 5.0E-36 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 SMART SM00490 301 400 2.1E-15 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1815 14235f9425580aea45a293c42b9af024 1295 Gene3D G3DSA:1.20.120.1080 445 546 3.6E-19 T 12-10-2018 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 59 326 1.7E-51 T 12-10-2018 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SMART SM00354 7 78 7.1E-8 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:1.10.260.40 1 51 1.1E-13 T 12-10-2018 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF13377 Periplasmic binding protein-like domain 175 328 1.1E-21 T 12-10-2018 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF53822 67 327 4.71E-41 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 1.0E-9 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 166 311 1.7E-51 T 12-10-2018 YpsIP31758_1526 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF47413 6 58 1.03E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 Pfam PF08479 POTRA domain, ShlB-type 37 110 9.6E-18 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 Gene3D G3DSA:2.40.160.50 139 513 4.6E-62 T 12-10-2018 YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 PIRSF PIRSF029745 2 513 3.8E-102 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 Gene3D G3DSA:3.10.20.310 19 110 1.7E-8 T 12-10-2018 YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 167 475 1.8E-85 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_2045 b0e7125f38de255abddaeaaa516d7dc5 513 Pfam PF17287 POTRA domain 114 161 2.4E-10 T 12-10-2018 IPR035251 ShlB, POTRA domain YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 SMART SM00345 13 72 1.1E-24 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF46785 2 76 3.32E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.20.120.530 82 228 1.3E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 Pfam PF07729 FCD domain 95 218 7.8E-17 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF48008 93 226 1.05E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.10.10.10 3 81 3.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 SMART SM00895 95 219 2.1E-14 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.2E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0489 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2492 8a324f3ccad35486d809b48ec83a8926 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 7.1E-20 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_2492 8a324f3ccad35486d809b48ec83a8926 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 490 5.9E-113 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_2492 8a324f3ccad35486d809b48ec83a8926 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 230 490 3.7E-88 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 183.759 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Gene3D G3DSA:3.30.470.20 115 295 1.2E-120 T 12-10-2018 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 1.4E-138 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Gene3D G3DSA:3.30.1490.20 137 201 1.2E-120 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 SUPERFAMILY SSF52440 2 122 6.62E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 SUPERFAMILY SSF56059 123 313 2.59E-58 T 12-10-2018 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Gene3D G3DSA:3.40.50.20 7 114 1.2E-120 T 12-10-2018 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.7E-47 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 YpsIP31758_0836 ff8d417a5657545007f42d79d0f3b1dd 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.6E-80 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 Gene3D G3DSA:2.40.50.140 2 69 6.4E-29 T 12-10-2018 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 PIRSF PIRSF002599 1 70 1.1E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 43 61 2.1E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 7 22 2.1E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 PRINTS PR00050 Cold shock protein signature 28 37 2.1E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 SMART SM00357 6 70 1.6E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 4.0E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0376 55c03d32d59d683bf52175891209b8c6 70 SUPERFAMILY SSF50249 3 69 1.12E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3434 0c51a47b01dc1c081e72b35f42036938 172 Pfam PF05638 Type VI secretion system effector, Hcp 8 147 3.5E-39 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_3434 0c51a47b01dc1c081e72b35f42036938 172 SUPERFAMILY SSF141452 5 169 5.23E-40 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_3434 0c51a47b01dc1c081e72b35f42036938 172 Gene3D G3DSA:2.30.110.20 5 171 1.3E-54 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 25.789 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 SUPERFAMILY SSF89919 2 110 2.62E-31 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 Gene3D G3DSA:3.30.300.20 1 111 3.8E-38 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-50 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.6E-40 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YpsIP31758_3595 6f005a089d5e761571dd5b3ecf6063d1 136 Pfam PF02033 Ribosome-binding factor A 7 115 4.9E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YpsIP31758_2503 29d5dacbdc500862244b77a36b5b9504 766 SUPERFAMILY SSF53955 511 761 2.08E-7 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_2503 29d5dacbdc500862244b77a36b5b9504 766 Gene3D G3DSA:2.70.70.10 22 164 6.4E-13 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2503 29d5dacbdc500862244b77a36b5b9504 766 SUPERFAMILY SSF51261 31 158 1.2E-6 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2503 29d5dacbdc500862244b77a36b5b9504 766 Pfam PF01551 Peptidase family M23 42 155 4.2E-6 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 Gene3D G3DSA:3.40.630.10 1 235 1.2E-64 T 12-10-2018 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 Pfam PF07687 Peptidase dimerisation domain 200 290 4.2E-5 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 SUPERFAMILY SSF53187 10 482 2.04E-66 T 12-10-2018 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 Gene3D G3DSA:3.40.630.10 340 486 4.5E-24 T 12-10-2018 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 4.6E-183 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 9.4E-98 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 1.8E-20 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_3156 e87d30d64f6081a3da570386042d01bd 486 PIRSF PIRSF016599 1 485 2.8E-211 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YpsIP31758_A0019 2703bb7e4f907309adac7013c730804a 263 Pfam PF00589 Phage integrase family 54 236 4.8E-32 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_A0019 2703bb7e4f907309adac7013c730804a 263 PIRSF PIRSF004576 8 261 1.3E-89 T 12-10-2018 IPR016423 Resolvase, Rsv YpsIP31758_A0019 2703bb7e4f907309adac7013c730804a 263 SUPERFAMILY SSF56349 57 236 3.53E-29 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_A0019 2703bb7e4f907309adac7013c730804a 263 Gene3D G3DSA:1.10.443.10 48 246 5.9E-29 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 Gene3D G3DSA:3.40.1280.10 223 395 1.1E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 157 229 2.9E-11 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 SUPERFAMILY SSF55315 149 226 6.36E-9 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 Pfam PF00588 SpoU rRNA Methylase family 247 384 5.2E-31 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 SUPERFAMILY SSF75217 240 392 7.85E-40 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 SMART SM00967 156 231 4.1E-8 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YpsIP31758_3203 1a166f63add218c2ae6d9c467433d95f 395 PIRSF PIRSF006280 1 393 2.7E-197 T 12-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 YpsIP31758_0114 0d8dc5858c24909590bd7da36987bcda 281 SUPERFAMILY SSF110997 207 276 4.05E-22 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_0114 0d8dc5858c24909590bd7da36987bcda 281 Pfam PF05036 Sporulation related domain 207 275 2.1E-19 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 YpsIP31758_0114 0d8dc5858c24909590bd7da36987bcda 281 Gene3D G3DSA:3.30.70.1070 202 281 1.7E-31 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_0114 0d8dc5858c24909590bd7da36987bcda 281 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 281 34.919 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 YpsIP31758_0114 0d8dc5858c24909590bd7da36987bcda 281 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 275 1.7E-73 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.8E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 SUPERFAMILY SSF48498 94 186 3.3E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 SUPERFAMILY SSF46689 17 82 5.99E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 Gene3D G3DSA:1.10.357.10 10 192 1.7E-46 T 12-10-2018 YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 4.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_2760 7dbcdea026d967ed9e92f98221c87cf4 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 4.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_3887 8ffc9ae31aec777d1f366a4b667dbe23 66 Pfam PF03889 Domain of unknown function 9 45 1.2E-22 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain YpsIP31758_3916 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 Pfam PF01026 TatD related DNase 4 255 3.1E-76 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 PIRSF PIRSF005902 1 259 7.8E-73 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 Gene3D G3DSA:3.20.20.140 1 264 6.0E-99 T 12-10-2018 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 4.4E-92 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 SUPERFAMILY SSF51556 1 259 5.06E-86 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_1585 9e503cc492545ccf9a5578ad2d675648 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 Pfam PF00005 ABC transporter 355 502 2.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 Gene3D G3DSA:3.40.50.300 330 583 1.7E-76 T 12-10-2018 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 Gene3D G3DSA:1.20.1560.10 1 326 3.3E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 SMART SM00382 364 548 3.4E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 SUPERFAMILY SSF52540 328 571 2.93E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 SUPERFAMILY SSF90123 9 330 3.14E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0689 e04646b01957d9125236646ad31c3f6f 590 Pfam PF00664 ABC transporter transmembrane region 24 292 3.8E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 PIRSF PIRSF001217 8 616 2.9E-213 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 Gene3D G3DSA:3.90.226.10 95 316 2.5E-163 T 12-10-2018 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 Gene3D G3DSA:3.40.1750.10 187 496 2.5E-163 T 12-10-2018 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 9.5E-51 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 SUPERFAMILY SSF52096 34 284 1.03E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 Pfam PF01343 Peptidase family S49 390 541 1.5E-47 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 Pfam PF01343 Peptidase family S49 139 287 3.7E-35 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 SUPERFAMILY SSF52096 316 528 1.33E-40 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 6.9E-222 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YpsIP31758_1982 e832add8fc1ba5de43092a014b950ce5 616 Gene3D G3DSA:3.90.226.10 317 539 2.5E-163 T 12-10-2018 YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:1.10.260.40 1 91 5.4E-36 T 12-10-2018 YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF01381 Helix-turn-helix 25 73 3.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF51306 109 233 1.12E-26 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 SMART SM00530 16 75 3.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:2.10.109.10 106 239 3.3E-50 T 12-10-2018 YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF00717 Peptidase S24-like 152 223 7.8E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YpsIP31758_2750 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF47413 1 92 2.65E-21 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.1E-43 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 SUPERFAMILY SSF110324 2 79 1.88E-34 T 12-10-2018 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-30 T 12-10-2018 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.288 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3611 69554d2aa512d229762d0879d739589d 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.0E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3957 55bf78bcff0c084ef19b3d5c5a098337 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 6.1E-37 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YpsIP31758_3957 55bf78bcff0c084ef19b3d5c5a098337 108 SUPERFAMILY SSF50022 1 107 2.14E-37 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_3957 55bf78bcff0c084ef19b3d5c5a098337 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 5.7E-41 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YpsIP31758_3957 55bf78bcff0c084ef19b3d5c5a098337 108 Gene3D G3DSA:2.102.10.10 1 108 1.9E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00474 3 171 1.3E-40 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Gene3D G3DSA:1.10.150.80 294 373 1.3E-28 T 12-10-2018 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 3.7E-146 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.681 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF53098 2 210 4.34E-62 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Gene3D G3DSA:1.10.150.80 195 293 1.7E-23 T 12-10-2018 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Gene3D G3DSA:3.30.420.10 1 194 4.1E-63 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF00570 HRDC domain 213 279 1.4E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 194 300 4.14E-30 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00341 210 289 3.7E-18 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 296 371 2.22E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 YpsIP31758_2013 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF01612 3'-5' exonuclease 3 168 7.9E-35 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 SUPERFAMILY SSF53335 17 265 4.78E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 Gene3D G3DSA:3.40.50.150 1 200 1.1E-67 T 12-10-2018 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 Gene3D G3DSA:1.10.8.100 201 268 1.8E-28 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 2.4E-79 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 56.043 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 7.1E-89 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 YpsIP31758_3444 6a208bce41b6e3569c3198205c2ec429 272 SMART SM00650 25 198 8.4E-83 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.6E-80 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.644 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.2E-151 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 SUPERFAMILY SSF52096 19 280 9.68E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:3.90.226.10 1 222 3.2E-86 T 12-10-2018 YpsIP31758_1484 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:1.10.12.10 223 273 2.4E-31 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PIRSF PIRSF003161 1 330 1.6E-117 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 113 323 2.09E-63 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 4 103 3.66E-21 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.2E-73 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 193 329 1.3E-41 T 12-10-2018 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14841 FliG middle domain 114 186 7.0E-25 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14842 FliG N-terminal domain 3 102 1.9E-31 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 88 190 1.9E-26 T 12-10-2018 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 1.5E-139 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF01706 FliG C-terminal domain 216 322 4.5E-37 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal YpsIP31758_2291 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 1 79 2.7E-20 T 12-10-2018 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:3.10.20.30 1 106 1.5E-34 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF46548 107 236 9.59E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 5.1E-32 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF54292 1 106 4.18E-31 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.4E-10 T 12-10-2018 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:1.10.1060.10 107 238 4.1E-59 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_2882 824628d2578f7787a8e0db6a45862640 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.1E-90 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 Pfam PF03466 LysR substrate binding domain 91 286 5.4E-26 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 Gene3D G3DSA:1.10.10.10 2 84 7.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 SUPERFAMILY SSF46785 6 84 2.62E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 SUPERFAMILY SSF53850 96 288 1.12E-27 T 12-10-2018 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 Gene3D G3DSA:3.40.190.290 96 268 7.8E-21 T 12-10-2018 YpsIP31758_1330 c25f3c6db994846208409a7165b392b6 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 PRINTS PR00147 DNA photolyase signature 145 161 5.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 PRINTS PR00147 DNA photolyase signature 384 398 5.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 PRINTS PR00147 DNA photolyase signature 345 363 5.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 PRINTS PR00147 DNA photolyase signature 325 341 5.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 SUPERFAMILY SSF48173 192 472 6.54E-108 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 Gene3D G3DSA:1.25.40.80 134 289 1.1E-77 T 12-10-2018 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 Gene3D G3DSA:3.40.50.620 5 204 1.1E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 SUPERFAMILY SSF52425 3 183 9.42E-53 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 Gene3D G3DSA:1.10.579.10 293 475 5.7E-82 T 12-10-2018 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 2.1E-81 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 YpsIP31758_1112 77196dd1358cdebd6527efe504ac4522 487 Pfam PF00875 DNA photolyase 5 175 1.1E-42 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 SUPERFAMILY SSF53850 26 257 1.94E-63 T 12-10-2018 YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 9.4E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Gene3D G3DSA:3.40.190.10 113 213 2.6E-85 T 12-10-2018 YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 SMART SM00062 27 256 1.6E-71 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 Gene3D G3DSA:3.40.190.10 29 252 2.6E-85 T 12-10-2018 YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_1428 e1e1ff5e951ae8c97cc1a0a94d4a1eaf 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 253 1.2E-91 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 YpsIP31758_0329 1e50d7a463af7f1cc9ea0facfaab91c6 152 Gene3D G3DSA:3.40.1000.10 5 151 1.7E-38 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0329 1e50d7a463af7f1cc9ea0facfaab91c6 152 SUPERFAMILY SSF55724 6 146 3.98E-46 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0329 1e50d7a463af7f1cc9ea0facfaab91c6 152 Pfam PF08786 DcrB 13 141 2.4E-39 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_1635 a4ba3816bf63c3aed1d7b29916a884a0 193 SUPERFAMILY SSF160930 5 161 8.11E-65 T 12-10-2018 YpsIP31758_1635 a4ba3816bf63c3aed1d7b29916a884a0 193 PIRSF PIRSF003159 1 182 1.5E-89 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YpsIP31758_1635 a4ba3816bf63c3aed1d7b29916a884a0 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 4.0E-112 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YpsIP31758_1635 a4ba3816bf63c3aed1d7b29916a884a0 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 8.5E-83 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YpsIP31758_1635 a4ba3816bf63c3aed1d7b29916a884a0 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.077 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.7E-236 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 338 393 4.5E-29 T 12-10-2018 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:3.40.50.300 1 203 1.3E-69 T 12-10-2018 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 9.1E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50465 298 393 9.21E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.667 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 206 334 7.6E-53 T 12-10-2018 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF52540 6 219 6.27E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3918 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YpsIP31758_2025 9e524d1239f0091d079daf27207fdd0f 320 PIRSF PIRSF026649 11 315 3.2E-92 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_2025 9e524d1239f0091d079daf27207fdd0f 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 6.8E-94 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_2025 9e524d1239f0091d079daf27207fdd0f 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 3.4E-133 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 YpsIP31758_2025 9e524d1239f0091d079daf27207fdd0f 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.918 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 Pfam PF12833 Helix-turn-helix domain 204 278 2.7E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 SUPERFAMILY SSF46689 177 227 2.96E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 Pfam PF02311 AraC-like ligand binding domain 30 157 2.8E-12 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 Gene3D G3DSA:2.60.120.10 7 112 6.1E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 SUPERFAMILY SSF51215 15 162 7.32E-22 T 12-10-2018 IPR037923 Transcription regulator HTH-like YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 SMART SM00342 193 276 3.6E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 SUPERFAMILY SSF46689 229 280 9.86E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0347 03c4194af5406ec596c6ed878918fa9b 288 Gene3D G3DSA:1.10.10.60 174 282 1.0E-28 T 12-10-2018 YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 7.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 7.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 7.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 Pfam PF12697 Alpha/beta hydrolase family 19 246 6.2E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 Gene3D G3DSA:3.40.50.1820 2 253 9.3E-75 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2898 4a1be6655735ed9cada13cc510d6530e 255 SUPERFAMILY SSF53474 3 253 9.95E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 Gene3D G3DSA:2.40.30.10 283 369 4.5E-34 T 12-10-2018 YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 Gene3D G3DSA:2.30.30.280 214 282 1.4E-27 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 6.1E-156 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 Pfam PF03054 tRNA methyl transferase 7 361 1.5E-142 T 12-10-2018 YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.894 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 Gene3D G3DSA:3.40.50.620 1 212 2.0E-96 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1612 3b521245666f6328e28cc1760b6c17c2 371 SUPERFAMILY SSF52402 5 245 2.43E-56 T 12-10-2018 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 Gene3D G3DSA:3.40.50.10470 142 340 7.0E-65 T 12-10-2018 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 Pfam PF01008 Initiation factor 2 subunit family 53 334 3.7E-64 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 40 334 3.3E-90 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 Gene3D G3DSA:1.20.120.420 6 141 9.8E-30 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 SUPERFAMILY SSF100950 16 339 3.41E-106 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 333 3.6E-126 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YpsIP31758_3179 6242a6061ea2d6be2a080ad9450b7275 346 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 345 35.769 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YpsIP31758_2707 801372c40aedc0625d4c23b0b6f9ea94 194 SUPERFAMILY SSF54001 70 189 1.24E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_2707 801372c40aedc0625d4c23b0b6f9ea94 194 Pfam PF00877 NlpC/P60 family 82 185 1.6E-31 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YpsIP31758_2707 801372c40aedc0625d4c23b0b6f9ea94 194 Gene3D G3DSA:3.90.1720.10 65 193 2.8E-45 T 12-10-2018 YpsIP31758_1916 907966836e7afc654960492c9311b78c 103 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 3.4E-19 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YpsIP31758_1916 907966836e7afc654960492c9311b78c 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.939 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 3.3E-190 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 Gene3D G3DSA:3.20.20.105 1 367 2.2E-170 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.1E-93 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.4E-179 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 SUPERFAMILY SSF51713 2 364 2.88E-163 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_3123 a3edcc49e3e08b50ac38c673e0da7702 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.422 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.9E-174 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF00575 S1 RNA binding domain 38 109 3.2E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 SMART SM00316 37 122 2.1E-9 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 Gene3D G3DSA:2.40.50.140 31 127 4.1E-31 T 12-10-2018 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.0E-101 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 Gene3D G3DSA:3.40.1260.20 402 488 3.9E-6 T 12-10-2018 YpsIP31758_0402 37a7c4ae82595842376d59ffc0d4ec24 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 SMART SM00382 27 218 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 Gene3D G3DSA:3.40.50.300 1 241 9.7E-70 T 12-10-2018 YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 Pfam PF00005 ABC transporter 20 170 5.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 PIRSF PIRSF039085 1 242 2.1E-83 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_2625 6c77c961a1f3614c90af31368434cbac 242 SUPERFAMILY SSF52540 3 234 1.65E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 Pfam PF00551 Formyl transferase 2 182 7.8E-67 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 32.16 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 Gene3D G3DSA:3.40.50.170 2 212 9.9E-90 T 12-10-2018 YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 3.8E-81 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 SUPERFAMILY SSF53328 2 201 2.22E-68 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1233 c31c78a31fe874e80d233a41b15421fa 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.81 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 4.0E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 SUPERFAMILY SSF74982 8 138 1.7E-51 T 12-10-2018 IPR023620 Small protein B YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 Gene3D G3DSA:2.40.280.10 7 134 8.7E-48 T 12-10-2018 IPR023620 Small protein B YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 Pfam PF01668 SmpB protein 14 157 6.3E-58 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 YpsIP31758_2893 50e116b31e60ef598a5f32ef8b556d7a 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.2E-54 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 165 311 5.3E-58 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 SUPERFAMILY SSF52728 163 322 1.28E-56 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 Pfam PF03830 PTS system sorbose subfamily IIB component 165 311 7.7E-57 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 Gene3D G3DSA:3.40.50.510 2 134 9.1E-42 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 2.1E-45 T 12-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 SUPERFAMILY SSF53062 3 128 3.79E-37 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 Pfam PF03610 PTS system fructose IIA component 5 116 1.9E-33 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YpsIP31758_2368 7e9b4e5eed7afcfe94397e6ec9ca2c4f 324 Gene3D G3DSA:3.40.35.10 160 324 5.8E-62 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.50.100 65 209 4.5E-110 T 12-10-2018 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 295 361 5.8E-11 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 SUPERFAMILY SSF111369 53 301 1.96E-86 T 12-10-2018 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 1.4E-9 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:1.10.287.470 100 173 4.5E-110 T 12-10-2018 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 9.8E-80 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.30.170 53 304 4.5E-110 T 12-10-2018 YpsIP31758_3067 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.420.20 305 374 4.5E-110 T 12-10-2018 YpsIP31758_2361 a943112d4445c58251fc9f2e05286690 132 SUPERFAMILY SSF55331 3 125 2.32E-42 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily YpsIP31758_2361 a943112d4445c58251fc9f2e05286690 132 Gene3D G3DSA:3.30.429.10 3 126 7.1E-46 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily YpsIP31758_2361 a943112d4445c58251fc9f2e05286690 132 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 3 123 6.2E-22 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-29 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 SMART SM00382 48 241 4.1E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 Gene3D G3DSA:3.40.50.300 8 332 4.3E-97 T 12-10-2018 YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 SUPERFAMILY SSF52540 22 263 5.45E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 6.1E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1956 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF00005 ABC transporter 40 191 5.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.6E-5 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 SUPERFAMILY SSF52540 220 601 5.18E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 Gene3D G3DSA:3.40.50.300 184 379 1.7E-82 T 12-10-2018 YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.9E-205 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 SMART SM00487 195 395 5.0E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.593 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 Gene3D G3DSA:1.10.8.630 2 113 4.3E-36 T 12-10-2018 YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 SMART SM00490 492 589 2.5E-8 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0116 d8dbb32bf38a6a25c812c1e19342326d 732 Pfam PF00270 DEAD/DEAH box helicase 219 364 9.6E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF55785 81 170 4.76E-8 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 8.0E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:1.10.8.60 378 455 2.4E-19 T 12-10-2018 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 SMART SM00382 226 370 4.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF52540 206 447 1.52E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 SUPERFAMILY SSF46689 459 513 1.43E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:1.10.10.60 457 514 1.1E-26 T 12-10-2018 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Pfam PF00989 PAS fold 82 124 4.6E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Pfam PF00158 Sigma-54 interaction domain 206 372 1.1E-60 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:3.40.50.300 193 377 9.7E-60 T 12-10-2018 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:3.30.450.20 82 190 3.6E-28 T 12-10-2018 YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 SMART SM00091 80 146 7.9E-6 T 12-10-2018 IPR000014 PAS domain YpsIP31758_1794 eb16ebfe5e73d908ee108ce0c96a41d4 525 Gene3D G3DSA:3.30.70.260 1 81 5.2E-26 T 12-10-2018 YpsIP31758_0665 74644b2836baaaeca9213a5c053b0652 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.4E-8 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 YpsIP31758_1354 614883efac4dd8f139288bdf408ed9b1 160 SUPERFAMILY SSF55724 5 155 6.8E-37 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_1354 614883efac4dd8f139288bdf408ed9b1 160 Pfam PF08786 DcrB 12 151 3.8E-34 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_1354 614883efac4dd8f139288bdf408ed9b1 160 Gene3D G3DSA:3.40.1000.10 5 159 1.0E-30 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_3516 0b1d7a9feff2dc030bd06a7db603cdf9 387 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 39 379 1.1E-117 T 12-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YpsIP31758_3516 0b1d7a9feff2dc030bd06a7db603cdf9 387 Gene3D G3DSA:3.40.50.2000 32 199 4.4E-36 T 12-10-2018 YpsIP31758_3516 0b1d7a9feff2dc030bd06a7db603cdf9 387 SUPERFAMILY SSF53756 39 381 3.45E-77 T 12-10-2018 YpsIP31758_3516 0b1d7a9feff2dc030bd06a7db603cdf9 387 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 112 350 2.7E-47 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YpsIP31758_3516 0b1d7a9feff2dc030bd06a7db603cdf9 387 Gene3D G3DSA:3.40.50.2000 204 382 5.1E-42 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF81891 431 650 3.04E-9 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF81301 9 191 1.72E-23 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Gene3D G3DSA:3.30.70.260 814 890 3.6E-5 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Gene3D G3DSA:1.10.3210.10 460 574 1.0E-7 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF81593 212 330 1.57E-10 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Pfam PF01842 ACT domain 818 878 5.6E-9 T 12-10-2018 IPR002912 ACT domain YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 PIRSF PIRSF006288 28 893 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 893 344.405 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF55021 816 887 2.71E-10 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Pfam PF01909 Nucleotidyltransferase domain 86 148 6.5E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF55021 707 766 5.34E-9 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Pfam PF08335 GlnD PII-uridylyltransferase 194 333 5.4E-37 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SUPERFAMILY SSF109604 459 560 9.42E-14 T 12-10-2018 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 Pfam PF01966 HD domain 470 603 1.7E-13 T 12-10-2018 IPR006674 HD domain YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 50 887 5.9E-301 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YpsIP31758_1011 d47ac6cfc10c85b64f2c0ffb7ebe506b 893 SMART SM00471 466 613 3.6E-11 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_1468 c30b1dfab3c434c887134943e35e1911 155 Gene3D G3DSA:2.60.120.370 1 155 2.0E-39 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily YpsIP31758_1468 c30b1dfab3c434c887134943e35e1911 155 SUPERFAMILY SSF51197 1 154 3.84E-41 T 12-10-2018 YpsIP31758_1468 c30b1dfab3c434c887134943e35e1911 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 6.8E-36 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_1468 c30b1dfab3c434c887134943e35e1911 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.5E-38 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.9E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 1.2E-54 T 12-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 Gene3D G3DSA:1.10.357.10 1 215 3.9E-79 T 12-10-2018 YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF46689 2 78 1.75E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF48498 85 203 5.34E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.4E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_3066 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.4E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_1814 53a5da3e930347aa81dd6d80e69d9368 201 Gene3D G3DSA:3.40.50.360 1 201 3.8E-67 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1814 53a5da3e930347aa81dd6d80e69d9368 201 Pfam PF02525 Flavodoxin-like fold 3 195 2.6E-47 T 12-10-2018 IPR003680 Flavodoxin-like fold YpsIP31758_1814 53a5da3e930347aa81dd6d80e69d9368 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 33.026 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 YpsIP31758_1814 53a5da3e930347aa81dd6d80e69d9368 201 SUPERFAMILY SSF52218 1 199 1.36E-58 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1534 2829a93f19f4f15e04c2f87035b7d9b8 414 SUPERFAMILY SSF50182 187 252 2.81E-12 T 12-10-2018 IPR010920 LSM domain superfamily YpsIP31758_1534 2829a93f19f4f15e04c2f87035b7d9b8 414 Pfam PF00924 Mechanosensitive ion channel 143 398 2.7E-55 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YpsIP31758_1534 2829a93f19f4f15e04c2f87035b7d9b8 414 Gene3D G3DSA:2.30.30.60 201 244 2.7E-5 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 714 8.0E-106 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 Gene3D G3DSA:2.170.130.10 49 179 3.1E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 SUPERFAMILY SSF56935 59 714 2.63E-125 T 12-10-2018 YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 7.3E-15 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 Gene3D G3DSA:2.40.170.20 180 714 3.1E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_0815 31013ddc4db711d0ed731348e81a9034 714 Pfam PF00593 TonB dependent receptor 258 711 3.3E-61 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SMART SM00091 308 373 4.5E-6 T 12-10-2018 IPR000014 PAS domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SUPERFAMILY SSF141868 608 847 1.23E-87 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SMART SM00052 602 844 6.8E-112 T 12-10-2018 IPR001633 EAL domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 588 3.6E-46 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SUPERFAMILY SSF55785 298 418 1.2E-16 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Gene3D G3DSA:3.20.20.450 606 853 9.8E-95 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Gene3D G3DSA:3.30.450.20 298 418 7.6E-17 T 12-10-2018 YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Pfam PF00989 PAS fold 308 416 2.5E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Gene3D G3DSA:3.30.70.270 425 605 2.0E-55 T 12-10-2018 YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 426 3.5E-13 T 12-10-2018 IPR000014 PAS domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SMART SM00267 420 592 8.4E-57 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 590 4.5E-41 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Pfam PF05228 CHASE4 domain 68 227 5.0E-18 T 12-10-2018 IPR007892 CHASE4 YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 SUPERFAMILY SSF55073 436 593 4.47E-46 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_0666 104905011a7d955bd84dff8fc9de65d6 855 Pfam PF00563 EAL domain 610 839 1.7E-70 T 12-10-2018 IPR001633 EAL domain YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:3.50.7.10 192 372 1.9E-239 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF54849 137 203 4.81E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 5.0E-255 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF48592 7 521 1.91E-77 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:3.30.260.10 136 410 1.9E-239 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF52029 185 376 8.02E-82 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:1.10.560.10 8 521 1.9E-239 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.7E-93 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 YpsIP31758_3675 c31487beecc4cf7dbb48bd96810885fd 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.403 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YpsIP31758_4088 c97f819ce9114f5936555d3a370cb256 188 Pfam PF00156 Phosphoribosyl transferase domain 35 154 4.9E-9 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_4088 c97f819ce9114f5936555d3a370cb256 188 SUPERFAMILY SSF53271 34 176 3.67E-24 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_4088 c97f819ce9114f5936555d3a370cb256 188 Gene3D G3DSA:3.40.50.2020 3 181 1.3E-30 T 12-10-2018 YpsIP31758_1940 510efa58a44176292527ed4290d876ad 211 Pfam PF03922 OmpW family 23 211 4.1E-65 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 YpsIP31758_1940 510efa58a44176292527ed4290d876ad 211 Gene3D G3DSA:2.40.160.20 22 211 1.2E-76 T 12-10-2018 YpsIP31758_1940 510efa58a44176292527ed4290d876ad 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1940 510efa58a44176292527ed4290d876ad 211 SUPERFAMILY SSF56925 23 211 3.66E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.207 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 9.0E-63 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF06418 CTP synthase N-terminus 5 266 7.9E-126 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 7.5E-264 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.300 1 285 8.0E-136 T 12-10-2018 YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52317 289 541 2.37E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52540 3 269 4.91E-122 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3317 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.880 287 545 1.4E-106 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_4133 31439dce277bdb20158dcf6197ff31dc 151 Gene3D G3DSA:3.40.630.30 1 147 1.1E-32 T 12-10-2018 YpsIP31758_4133 31439dce277bdb20158dcf6197ff31dc 151 Pfam PF13673 Acetyltransferase (GNAT) domain 58 133 1.4E-14 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_4133 31439dce277bdb20158dcf6197ff31dc 151 SUPERFAMILY SSF55729 1 134 9.41E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1281 e6301cecabd54f763475bc38ad36d8db 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 56.391 T 12-10-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 YpsIP31758_1281 e6301cecabd54f763475bc38ad36d8db 141 SUPERFAMILY SSF55729 1 130 8.1E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1281 e6301cecabd54f763475bc38ad36d8db 141 Gene3D G3DSA:3.40.630.30 1 141 2.5E-43 T 12-10-2018 YpsIP31758_1281 e6301cecabd54f763475bc38ad36d8db 141 Pfam PF00583 Acetyltransferase (GNAT) family 22 123 7.8E-19 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_3441 35ad967b0633a724d3d1ad85f26c740a 780 Gene3D G3DSA:2.60.450.10 44 141 1.6E-6 T 12-10-2018 YpsIP31758_3441 35ad967b0633a724d3d1ad85f26c740a 780 Pfam PF04453 Organic solvent tolerance protein 307 693 5.2E-107 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 YpsIP31758_3441 35ad967b0633a724d3d1ad85f26c740a 780 Pfam PF03968 OstA-like protein 53 193 8.8E-30 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal YpsIP31758_3441 35ad967b0633a724d3d1ad85f26c740a 780 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 759 19.914 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 YpsIP31758_1667 d7ac4c99a1f640006063cf0fc2a8c1ae 184 SMART SM00972 121 181 5.4E-16 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1667 d7ac4c99a1f640006063cf0fc2a8c1ae 184 Pfam PF05229 Spore Coat Protein U domain 27 181 6.5E-30 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_2884 6e0750c5470509e9b55745bc6fc86eab 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.6E-35 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 YpsIP31758_2884 6e0750c5470509e9b55745bc6fc86eab 115 SUPERFAMILY SSF81343 5 114 1.24E-28 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2884 6e0750c5470509e9b55745bc6fc86eab 115 Gene3D G3DSA:1.20.1300.10 1 115 3.9E-30 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2884 6e0750c5470509e9b55745bc6fc86eab 115 PIRSF PIRSF000169 1 115 5.3E-41 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 YpsIP31758_2062 4ae31d38718d86c248e587c26d7807e8 284 Pfam PF00793 DAHP synthetase I family 10 275 7.8E-68 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_2062 4ae31d38718d86c248e587c26d7807e8 284 Gene3D G3DSA:3.20.20.70 1 284 1.7E-98 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2062 4ae31d38718d86c248e587c26d7807e8 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.4E-118 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_2062 4ae31d38718d86c248e587c26d7807e8 284 SUPERFAMILY SSF51569 3 279 6.32E-103 T 12-10-2018 YpsIP31758_2062 4ae31d38718d86c248e587c26d7807e8 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.167 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_0332 6573decde6e9e897b30cee7c0c6aef63 56 SUPERFAMILY SSF55724 2 50 3.4E-14 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0332 6573decde6e9e897b30cee7c0c6aef63 56 Gene3D G3DSA:3.40.1000.10 1 55 3.0E-12 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0332 6573decde6e9e897b30cee7c0c6aef63 56 Pfam PF08786 DcrB 2 45 5.3E-12 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_3898 7cd6b047f5dcf98077b20479ca32345f 117 SUPERFAMILY SSF53137 3 115 2.62E-53 T 12-10-2018 YpsIP31758_3898 7cd6b047f5dcf98077b20479ca32345f 117 Gene3D G3DSA:3.30.420.100 1 117 1.7E-46 T 12-10-2018 YpsIP31758_3898 7cd6b047f5dcf98077b20479ca32345f 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.23 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3898 7cd6b047f5dcf98077b20479ca32345f 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.5E-44 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3898 7cd6b047f5dcf98077b20479ca32345f 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.4E-46 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 242 260 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 87 111 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 408 424 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 147 176 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 183 205 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 267 283 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 298 314 9.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.2E-79 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 4.1E-101 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 PIRSF PIRSF000106 3 563 4.6E-228 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF51735 271 562 5.63E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.084 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.10380 18 268 2.2E-115 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 SMART SM01274 81 261 9.4E-110 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.720 269 565 4.0E-108 T 12-10-2018 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF53223 6 270 4.89E-111 T 12-10-2018 YpsIP31758_2463 040fa337528b8e652c609859aca0e6ca 565 SMART SM00919 271 531 5.4E-133 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YpsIP31758_0453 581f4ca194d9b253819bba5b0a765411 84 PIRSF PIRSF003113 1 83 1.7E-22 T 12-10-2018 IPR002634 BolA protein YpsIP31758_0453 581f4ca194d9b253819bba5b0a765411 84 Pfam PF01722 BolA-like protein 19 74 8.7E-16 T 12-10-2018 IPR002634 BolA protein YpsIP31758_0453 581f4ca194d9b253819bba5b0a765411 84 Gene3D G3DSA:3.30.300.90 1 84 4.4E-37 T 12-10-2018 YpsIP31758_0453 581f4ca194d9b253819bba5b0a765411 84 SUPERFAMILY SSF82657 2 82 7.72E-30 T 12-10-2018 IPR036065 BolA-like superfamily YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 Gene3D G3DSA:3.20.20.120 98 295 1.3E-126 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 Gene3D G3DSA:3.30.390.10 4 302 1.3E-126 T 12-10-2018 IPR029017 Enolase-like, N-terminal YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 Pfam PF13378 Enolase C-terminal domain-like 127 283 9.3E-15 T 12-10-2018 IPR029065 Enolase C-terminal domain-like YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 SUPERFAMILY SSF51604 108 307 1.23E-51 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 SUPERFAMILY SSF54826 1 98 2.36E-28 T 12-10-2018 YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 9.1E-117 T 12-10-2018 YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 SMART SM00922 115 210 5.6E-9 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YpsIP31758_1485 f3eeb6065ee514aa750ae945c8df5718 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.613 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 Gene3D G3DSA:3.30.300.130 101 188 8.3E-21 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.4E-100 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 1.3E-12 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF89360 1 97 1.73E-21 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF117916 95 184 1.26E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.185 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 Gene3D G3DSA:2.60.300.12 1 98 1.3E-13 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 6.0E-28 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YpsIP31758_3990 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01106 NifU-like domain 111 177 7.7E-20 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 Gene3D G3DSA:3.30.1330.60 429 557 2.6E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 PRINTS PR01021 OMPA domain signature 477 492 4.2E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 PRINTS PR01021 OMPA domain signature 447 469 4.2E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 PRINTS PR01021 OMPA domain signature 492 508 4.2E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 Pfam PF00691 OmpA family 446 542 1.3E-15 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_0781 80c19715b02d5cf8ae595b6e07c52072 573 SUPERFAMILY SSF103088 422 547 1.57E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 83 1.0E-37 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 SUPERFAMILY SSF47345 3 84 1.31E-33 T 12-10-2018 IPR035900 Colicin E immunity protein superfamily YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 3.3E-25 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 3.3E-25 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 3.3E-25 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 Gene3D G3DSA:1.10.1200.20 1 84 2.6E-34 T 12-10-2018 IPR035900 Colicin E immunity protein superfamily YpsIP31758_0165 fda7679c00ff059668b362a9fa935ea0 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 83 8.8E-35 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 280 7.3E-91 T 12-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 Gene3D G3DSA:1.20.140.10 288 478 6.0E-64 T 12-10-2018 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 Gene3D G3DSA:2.40.110.10 152 282 4.3E-39 T 12-10-2018 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 12-10-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 Gene3D G3DSA:1.10.3140.10 14 151 9.9E-43 T 12-10-2018 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 1.4E-61 T 12-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 SUPERFAMILY SSF56645 13 282 2.33E-80 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 PIRSF PIRSF000331 11 501 2.1E-191 T 12-10-2018 IPR004925 HpaB/PvcC/4-BUDH YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 PIRSF PIRSF500125 1 518 9.3E-275 T 12-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YpsIP31758_2357 023bf0d6e085214023cf2d1728aba220 520 SUPERFAMILY SSF47203 272 493 5.44E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 Gene3D G3DSA:3.30.420.40 4 297 1.1E-90 T 12-10-2018 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 Gene3D G3DSA:3.30.420.40 119 290 1.1E-90 T 12-10-2018 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 304 69.229 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 SUPERFAMILY SSF53067 1 301 2.27E-60 T 12-10-2018 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 Pfam PF00480 ROK family 2 301 3.3E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_1603 37c5d2b406abe705724ad25c824d97ae 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.3E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.3E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.3E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.3E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF82051 2 157 1.31E-56 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 PIRSF PIRSF002401 1 375 1.3E-139 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.084 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.8E-146 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01018 GTP1/OBG 4 156 6.7E-58 T 12-10-2018 IPR006169 GTP1/OBG domain YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:3.40.50.300 159 339 1.3E-52 T 12-10-2018 YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF52540 151 339 3.54E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3609 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:2.70.210.12 1 158 5.7E-62 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 SUPERFAMILY SSF50331 252 340 9.07E-7 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 SUPERFAMILY SSF52540 4 242 3.77E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 Gene3D G3DSA:3.40.50.300 2 270 4.4E-68 T 12-10-2018 YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 Pfam PF00005 ABC transporter 19 163 3.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1348 002a7b7b954df161a90967e114498354 349 SMART SM00382 28 213 2.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_B0062 575af7451fb0c7ffa1f7aa6876768159 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 198 36.141 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_B0062 575af7451fb0c7ffa1f7aa6876768159 198 SUPERFAMILY SSF142695 6 172 1.07E-55 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_B0062 575af7451fb0c7ffa1f7aa6876768159 198 Gene3D G3DSA:3.40.50.10990 5 174 2.2E-61 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_B0062 575af7451fb0c7ffa1f7aa6876768159 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 31 195 2.7E-62 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_B0062 575af7451fb0c7ffa1f7aa6876768159 198 Pfam PF00925 GTP cyclohydrolase II 19 171 1.7E-57 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 Gene3D G3DSA:1.20.1280.20 80 171 4.6E-24 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 1.4E-15 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 SMART SM00271 1 66 7.8E-9 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.23 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 SUPERFAMILY SSF47144 78 171 1.83E-24 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 Pfam PF00226 DnaJ domain 2 70 6.9E-7 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.2E-51 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 SUPERFAMILY SSF46565 1 74 3.53E-18 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_1171 2ff4573fda8f888ee315c6325018bfd8 174 Gene3D G3DSA:1.10.287.110 1 79 3.6E-24 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PIRSF PIRSF000097 108 266 1.7E-49 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PIRSF PIRSF000097 1 113 4.0E-43 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 121 138 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 227 242 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 SUPERFAMILY SSF51430 1 265 3.67E-87 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 Gene3D G3DSA:3.20.20.100 1 273 2.2E-117 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 Pfam PF00248 Aldo/keto reductase family 16 258 7.1E-48 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PRINTS PR00069 Aldo-keto reductase signature 121 138 1.7E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.7E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PRINTS PR00069 Aldo-keto reductase signature 155 184 1.7E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PRINTS PR00069 Aldo-keto reductase signature 194 218 1.7E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0586 1e906a11c6e5fb5c1acb51833ec4a55b 275 PRINTS PR00069 Aldo-keto reductase signature 89 107 1.7E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF53850 90 283 4.34E-24 T 12-10-2018 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 Pfam PF03466 LysR substrate binding domain 88 279 1.2E-22 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 284 50.958 T 12-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:3.40.190.290 89 292 7.4E-15 T 12-10-2018 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF46785 2 81 6.93E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0150 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:1.10.10.10 1 83 3.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Pfam PF10415 Fumarase C C-terminus 408 461 1.4E-25 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Pfam PF00206 Lyase 13 342 1.2E-116 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Gene3D G3DSA:1.10.40.30 408 465 4.7E-31 T 12-10-2018 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.314 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Gene3D G3DSA:1.10.275.10 5 138 9.9E-56 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 SUPERFAMILY SSF48557 5 459 2.83E-157 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 Gene3D G3DSA:1.20.200.10 139 407 3.9E-120 T 12-10-2018 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 12-10-2018 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 12-10-2018 YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.7E-33 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.7E-33 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.7E-33 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.7E-33 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1873 8b4c3955cfa9acfa73e4720a785d2aea 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 7.4E-243 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.1E-169 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1178 1213 6.9E-15 T 12-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 SUPERFAMILY SSF50249 40 124 8.88E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Hamap MF_00970 Ribonuclease E [rne]. 1 1202 41.629 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Pfam PF00575 S1 RNA binding domain 36 118 1.5E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 SMART SM00316 37 119 8.7E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Pfam PF10150 Ribonuclease E/G family 121 391 7.7E-92 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Gene3D G3DSA:3.40.1260.20 401 510 4.1E-42 T 12-10-2018 YpsIP31758_1569 06fd68d148eb40ccbd9e978b02e30cc5 1216 Gene3D G3DSA:2.40.50.140 32 125 7.7E-34 T 12-10-2018 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 1.3E-23 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Gene3D G3DSA:3.40.50.740 52 517 1.1E-193 T 12-10-2018 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Pfam PF00384 Molybdopterin oxidoreductase 52 508 1.3E-58 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 SUPERFAMILY SSF53706 10 627 8.51E-153 T 12-10-2018 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 SUPERFAMILY SSF50692 618 750 2.69E-32 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Gene3D G3DSA:2.40.40.20 599 753 2.8E-38 T 12-10-2018 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Gene3D G3DSA:3.90.55.10 10 565 1.1E-193 T 12-10-2018 YpsIP31758_0974 b222e24a941549da9c9b77f48be89111 753 Gene3D G3DSA:3.40.228.10 145 591 1.1E-193 T 12-10-2018 YpsIP31758_4015 c34ac3067e1732a9ea91fe1baf7c9786 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 188 5.2E-31 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_4015 c34ac3067e1732a9ea91fe1baf7c9786 194 Pfam PF01914 MarC family integral membrane protein 2 190 1.3E-57 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_0832 02124991ee59ed0f83d092ce4cb97d2f 365 SUPERFAMILY SSF55909 7 364 2.86E-139 T 12-10-2018 YpsIP31758_0832 02124991ee59ed0f83d092ce4cb97d2f 365 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 10 364 1.1E-175 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YpsIP31758_0832 02124991ee59ed0f83d092ce4cb97d2f 365 Gene3D G3DSA:3.75.10.10 6 365 5.0E-139 T 12-10-2018 YpsIP31758_0832 02124991ee59ed0f83d092ce4cb97d2f 365 Hamap MF_01841 Agmatine deiminase [aguA]. 9 364 59.51 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YpsIP31758_0832 02124991ee59ed0f83d092ce4cb97d2f 365 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 18 363 4.2E-121 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YpsIP31758_0919 5e9ccd7e2bbd740b9690b1c3424aad9a 103 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 40 57 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_0919 5e9ccd7e2bbd740b9690b1c3424aad9a 103 SUPERFAMILY SSF55604 27 98 6.02E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_0919 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Gene3D G3DSA:3.30.1360.60 22 102 1.5E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_0919 5e9ccd7e2bbd740b9690b1c3424aad9a 103 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 23 86 5.2E-18 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YpsIP31758_0919 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Pfam PF00367 phosphotransferase system, EIIB 31 62 3.6E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_0693 6136ebcd92185518179bdcd6c5b525b3 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 447 6.0E-171 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_0693 6136ebcd92185518179bdcd6c5b525b3 447 PIRSF PIRSF002746 1 447 1.8E-141 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_0693 6136ebcd92185518179bdcd6c5b525b3 447 Pfam PF02447 GntP family permease 4 445 5.0E-158 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:2.40.30.10 2 98 1.4E-23 T 12-10-2018 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF63380 3 97 1.47E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF52343 100 231 1.83E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.5E-21 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 1.5E-4 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:3.40.50.80 99 233 3.8E-28 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.4E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.4E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.4E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.4E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_0281 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.4E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_3575 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 Pfam PF01547 Bacterial extracellular solute-binding protein 45 340 4.8E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_3575 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 SUPERFAMILY SSF53850 32 432 1.74E-79 T 12-10-2018 YpsIP31758_3575 e8fd8dfe44d1c21e0f23de6c60ea67d9 437 Gene3D G3DSA:3.40.190.10 31 434 2.3E-75 T 12-10-2018 YpsIP31758_0448 5f27a101a37945e59adc77b280409d37 272 Pfam PF00005 ABC transporter 29 175 4.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0448 5f27a101a37945e59adc77b280409d37 272 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0448 5f27a101a37945e59adc77b280409d37 272 SMART SM00382 36 233 3.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0448 5f27a101a37945e59adc77b280409d37 272 Gene3D G3DSA:3.40.50.300 8 252 5.1E-63 T 12-10-2018 YpsIP31758_0448 5f27a101a37945e59adc77b280409d37 272 SUPERFAMILY SSF52540 11 240 4.44E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 2 180 1.94E-66 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 1 180 2.3E-72 T 12-10-2018 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 4.8E-60 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.1220 190 360 1.5E-60 T 12-10-2018 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 1.8E-49 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 9.0E-278 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 364 562 2.2E-67 T 12-10-2018 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 368 572 5.18E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.0E-45 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YpsIP31758_3401 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52467 188 362 3.44E-63 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_3208 123bf3c63d361f8b6e0d81e525efa027 113 PIRSF PIRSF034456 8 113 1.4E-58 T 12-10-2018 IPR017028 Uncharacterised conserved protein UCP034456 YpsIP31758_3208 123bf3c63d361f8b6e0d81e525efa027 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 7.6E-7 T 12-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 9.4E-57 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 9.4E-57 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 9.4E-57 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 9.4E-57 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 9.4E-57 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:3.40.1160.10 2 258 6.5E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF00696 Amino acid kinase family 6 234 8.1E-44 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF53633 6 256 3.14E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF01472 PUA domain 276 350 8.4E-21 T 12-10-2018 IPR002478 PUA domain GO:0003723 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF88697 276 366 5.36E-23 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 35.94 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 PIRSF PIRSF000729 1 367 3.4E-141 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 2.5E-151 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:2.30.130.10 266 367 1.0E-28 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 YpsIP31758_3150 2bba4a88aae9bf859fc4d706999c715f 367 SMART SM00359 276 359 1.7E-21 T 12-10-2018 IPR002478 PUA domain GO:0003723 YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.3E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 12-10-2018 YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF109635 9 110 8.24E-37 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 Gene3D G3DSA:1.20.120.910 20 150 1.7E-35 T 12-10-2018 YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.578 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YpsIP31758_3338 e48e7ebf611fae039bc107fa1fd6563d 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.1E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YpsIP31758_4034 6782cefae553d7a763269f61ac7cc2cd 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.8E-54 T 12-10-2018 IPR019598 Universal stress protein B YpsIP31758_4034 6782cefae553d7a763269f61ac7cc2cd 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.029 T 12-10-2018 IPR019598 Universal stress protein B YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.40.50.800 532 642 6.1E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 SMART SM00863 170 219 2.6E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.002 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF81271 3 61 1.85E-16 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF03129 Anticodon binding domain 541 628 4.4E-21 T 12-10-2018 IPR004154 Anticodon-binding YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.8E-50 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55681 243 525 5.84E-96 T 12-10-2018 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF52954 529 636 1.15E-31 T 12-10-2018 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.980.10 69 222 3.9E-62 T 12-10-2018 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.54.20 130 187 3.9E-62 T 12-10-2018 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.930.10 223 531 2.0E-128 T 12-10-2018 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.10.20.30 1 64 3.6E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.8E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55186 63 241 7.19E-64 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF02824 TGS domain 4 61 1.4E-11 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 YpsIP31758_1712 f861d3aa4b80df4efebdb340763c66f5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.0E-242 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 5.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 5.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 Gene3D G3DSA:3.40.50.720 4 256 2.4E-80 T 12-10-2018 YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 SUPERFAMILY SSF51735 16 255 9.52E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 254 1.2E-68 T 12-10-2018 YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3287 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3370 a5fcdf846efa77e019f9562c4638bcf0 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 31 2.0E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_3370 a5fcdf846efa77e019f9562c4638bcf0 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_3370 a5fcdf846efa77e019f9562c4638bcf0 154 Gene3D G3DSA:3.30.700.10 13 150 1.3E-23 T 12-10-2018 YpsIP31758_3370 a5fcdf846efa77e019f9562c4638bcf0 154 SUPERFAMILY SSF54523 34 144 9.94E-23 T 12-10-2018 YpsIP31758_3370 a5fcdf846efa77e019f9562c4638bcf0 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 9.1E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_1436 853e1cd9f40aebd9e51bd8d559d4de1f 182 PIRSF PIRSF017340 2 171 6.6E-69 T 12-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 YpsIP31758_1436 853e1cd9f40aebd9e51bd8d559d4de1f 182 Pfam PF00293 NUDIX domain 37 150 6.8E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_1436 853e1cd9f40aebd9e51bd8d559d4de1f 182 SUPERFAMILY SSF55811 11 167 7.45E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_1436 853e1cd9f40aebd9e51bd8d559d4de1f 182 Gene3D G3DSA:3.90.79.10 2 178 9.5E-56 T 12-10-2018 YpsIP31758_3151 c5c4284fa3fe8bc699d1eee4f8b84eb7 133 Pfam PF07417 Transcriptional regulator Crl 5 122 4.8E-53 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 YpsIP31758_3151 c5c4284fa3fe8bc699d1eee4f8b84eb7 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 31.963 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 YpsIP31758_3151 c5c4284fa3fe8bc699d1eee4f8b84eb7 133 Gene3D G3DSA:3.30.310.230 1 133 6.0E-56 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 711 800 2.7E-32 T 12-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Pfam PF00072 Response regulator receiver domain 829 938 2.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 943 27.887 T 12-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Gene3D G3DSA:3.40.50.2300 822 949 8.0E-39 T 12-10-2018 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 9.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SUPERFAMILY SSF47384 455 537 2.75E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 5.4E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SUPERFAMILY SSF52172 704 817 8.45E-40 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SMART SM00448 827 938 3.1E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Gene3D G3DSA:1.10.287.130 448 534 1.4E-22 T 12-10-2018 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SUPERFAMILY SSF52172 827 944 4.84E-38 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SMART SM00387 583 694 9.2E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SMART SM00388 471 536 3.3E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 SUPERFAMILY SSF55874 525 696 1.96E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Gene3D G3DSA:3.40.50.10970 709 821 1.3E-9 T 12-10-2018 IPR038388 RcsC, C-terminal domain superfamily YpsIP31758_2765 df617f6eea6ca89d870cd9c9b114d9c3 949 Gene3D G3DSA:3.30.565.10 537 698 4.6E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1804 a12d91738f7001e21770eb51449ed4da 110 SUPERFAMILY SSF103481 6 105 8.63E-20 T 12-10-2018 YpsIP31758_1804 a12d91738f7001e21770eb51449ed4da 110 Gene3D G3DSA:1.10.3730.20 1 110 6.8E-37 T 12-10-2018 YpsIP31758_1804 a12d91738f7001e21770eb51449ed4da 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 2.5E-28 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 5.5E-159 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.7E-92 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 SUPERFAMILY SSF51395 1 334 3.19E-106 T 12-10-2018 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 Gene3D G3DSA:3.20.20.70 1 336 8.7E-146 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 PIRSF PIRSF000164 13 336 4.9E-96 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 YpsIP31758_2555 a7c1b6562f4a670e133f80821d34483d 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.453 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 YpsIP31758_0530 410c860a7e7bdf0a6c1ea5dbae9af44d 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 5.0E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0530 410c860a7e7bdf0a6c1ea5dbae9af44d 272 SUPERFAMILY SSF161098 6 267 1.96E-67 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0530 410c860a7e7bdf0a6c1ea5dbae9af44d 272 Gene3D G3DSA:1.10.3720.10 3 264 3.6E-66 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1731 636d6eb7a21d564145a86e4d75591ed9 128 Gene3D G3DSA:1.10.3730.20 38 126 2.7E-6 T 12-10-2018 YpsIP31758_1731 636d6eb7a21d564145a86e4d75591ed9 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 23.171 T 12-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YpsIP31758_1731 636d6eb7a21d564145a86e4d75591ed9 128 SUPERFAMILY SSF103481 42 124 4.58E-11 T 12-10-2018 YpsIP31758_1056 d1f0389a2af6ce259426ab7ef2314c91 494 Gene3D G3DSA:1.10.4160.10 11 476 4.3E-109 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily YpsIP31758_1056 d1f0389a2af6ce259426ab7ef2314c91 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 27 462 2.9E-85 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 Gene3D G3DSA:3.30.230.10 1 119 8.6E-45 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.542 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 SUPERFAMILY SSF54211 5 114 9.36E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 98 3.0E-42 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 6.3E-36 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YpsIP31758_4155 510914fba22b3ad18df9553c6e8ea155 119 Pfam PF00825 Ribonuclease P 6 111 2.7E-32 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YpsIP31758_2469 545c08ec809fb26a4f50a43dabbbc6be 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 1.7E-47 T 12-10-2018 IPR007349 Domain of unknown function DUF418 YpsIP31758_3268 ec5d0af835cdf215e2df688cdbd2341b 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 316 9.5E-24 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 Gene3D G3DSA:3.30.160.390 1 88 1.0E-31 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 Pfam PF13356 Arm DNA-binding domain 3 88 1.6E-17 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 Gene3D G3DSA:1.10.443.10 207 385 7.5E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 Gene3D G3DSA:1.10.150.130 90 206 4.6E-32 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 SUPERFAMILY SSF56349 98 380 2.24E-66 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0884 2238d40757e53a436a0db9bc9a7f7d55 404 Pfam PF00589 Phage integrase family 207 370 5.0E-24 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 9.1E-37 T 12-10-2018 IPR025857 MacB-like periplasmic core domain YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 Pfam PF02687 FtsX-like permease family 554 642 2.3E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 SUPERFAMILY SSF52540 4 225 2.99E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 SMART SM00382 33 220 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 Gene3D G3DSA:3.40.50.300 1 265 1.3E-68 T 12-10-2018 YpsIP31758_2610 d4f72064a8f62c6540936bae47766feb 649 Pfam PF00005 ABC transporter 24 172 1.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1068 5a8f3e8bf322c0b0d0fc0088e1fb137a 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 3.4E-65 T 12-10-2018 IPR009587 Protein of unknown function DUF1198 YpsIP31758_1068 5a8f3e8bf322c0b0d0fc0088e1fb137a 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 2.0E-76 T 12-10-2018 IPR009587 Protein of unknown function DUF1198 YpsIP31758_1036 0a8249f1b57856e4b0fdbfb8cd9afd2f 146 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 29 45 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YpsIP31758_1036 0a8249f1b57856e4b0fdbfb8cd9afd2f 146 Gene3D G3DSA:3.30.160.20 9 146 2.5E-36 T 12-10-2018 YpsIP31758_1036 0a8249f1b57856e4b0fdbfb8cd9afd2f 146 SUPERFAMILY SSF75620 15 123 1.84E-13 T 12-10-2018 YpsIP31758_1036 0a8249f1b57856e4b0fdbfb8cd9afd2f 146 Pfam PF00472 RF-1 domain 16 137 5.2E-22 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 69 323 1.8E-101 T 12-10-2018 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 162 324 1.8E-101 T 12-10-2018 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:1.10.260.40 3 59 4.2E-25 T 12-10-2018 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 9.5E-42 T 12-10-2018 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 SMART SM00354 1 71 2.0E-36 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.616 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF53822 60 340 1.02E-95 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1755 90362defb78a9eafd61b12087e2f7016 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 661 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 675 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 696 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 715 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SMART SM00388 497 559 1.1E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SMART SM00448 738 848 1.7E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Gene3D G3DSA:1.10.8.500 321 365 5.6E-11 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SUPERFAMILY SSF158472 321 363 1.44E-7 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Pfam PF12860 PAS fold 386 486 1.5E-9 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SUPERFAMILY SSF47384 492 557 2.55E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Pfam PF00672 HAMP domain 323 362 2.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SUPERFAMILY SSF52172 739 851 9.68E-20 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Gene3D G3DSA:1.10.287.130 489 558 4.6E-17 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Gene3D G3DSA:3.30.450.20 366 487 2.6E-9 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Gene3D G3DSA:3.40.50.2300 736 851 1.9E-18 T 12-10-2018 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SUPERFAMILY SSF55874 550 718 4.06E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SUPERFAMILY SSF55785 367 471 3.24E-7 T 12-10-2018 IPR035965 PAS domain superfamily YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 716 5.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Pfam PF00072 Response regulator receiver domain 740 848 6.8E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Gene3D G3DSA:3.30.565.10 561 722 6.0E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SMART SM00304 315 368 5.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 SMART SM00387 600 718 2.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_4031 e10a0a6d9e1450b4743dc7b9b19746fe 851 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 558 6.5E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1450 79569ebd50ebae331cfc04d900568a59 404 Pfam PF00155 Aminotransferase class I and II 58 392 3.6E-45 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1450 79569ebd50ebae331cfc04d900568a59 404 Gene3D G3DSA:3.40.640.10 53 294 1.1E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1450 79569ebd50ebae331cfc04d900568a59 404 SUPERFAMILY SSF53383 7 401 6.92E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1450 79569ebd50ebae331cfc04d900568a59 404 Gene3D G3DSA:3.90.1150.10 21 398 1.1E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3730 6365d05d87b0ae29455614674f6ab64d 366 Gene3D G3DSA:1.20.81.30 19 140 4.1E-15 T 12-10-2018 YpsIP31758_3730 6365d05d87b0ae29455614674f6ab64d 366 Pfam PF00482 Type II secretion system (T2SS), protein F 32 160 6.4E-13 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_3730 6365d05d87b0ae29455614674f6ab64d 366 Pfam PF00482 Type II secretion system (T2SS), protein F 235 355 1.6E-12 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_3730 6365d05d87b0ae29455614674f6ab64d 366 Gene3D G3DSA:1.20.81.30 227 333 1.1E-7 T 12-10-2018 YpsIP31758_2762 129efe2f7af4ae59eb266e662ea5ceb5 384 SUPERFAMILY SSF103473 22 378 4.19E-35 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2762 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 18 189 1.8E-13 T 12-10-2018 YpsIP31758_2762 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 200 382 2.3E-20 T 12-10-2018 YpsIP31758_2762 129efe2f7af4ae59eb266e662ea5ceb5 384 Pfam PF07690 Major Facilitator Superfamily 22 324 6.9E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3040 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.90.25.10 168 312 4.5E-113 T 12-10-2018 YpsIP31758_3040 01449c0cccf5695c74357fe33438884f 321 SUPERFAMILY SSF51735 1 318 2.32E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3040 01449c0cccf5695c74357fe33438884f 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 48.945 T 12-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 YpsIP31758_3040 01449c0cccf5695c74357fe33438884f 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 2.7E-75 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_3040 01449c0cccf5695c74357fe33438884f 321 Gene3D G3DSA:3.40.50.720 6 303 4.5E-113 T 12-10-2018 YpsIP31758_1991 a3f01e457c7ce8d2aca2a346e35c852e 644 SMART SM00763 19 380 2.1E-216 T 12-10-2018 IPR013153 PrkA AAA domain YpsIP31758_1991 a3f01e457c7ce8d2aca2a346e35c852e 644 PIRSF PIRSF000549 1 644 1.0E-285 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 YpsIP31758_1991 a3f01e457c7ce8d2aca2a346e35c852e 644 SUPERFAMILY SSF52540 75 368 6.05E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1991 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.3E-72 T 12-10-2018 IPR010650 PrkA C-terminal domain YpsIP31758_1991 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF08298 PrkA AAA domain 20 380 3.2E-175 T 12-10-2018 IPR013153 PrkA AAA domain YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Pfam PF07732 Multicopper oxidase 53 167 1.1E-25 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Gene3D G3DSA:2.60.40.420 347 472 1.4E-23 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Pfam PF07731 Multicopper oxidase 362 468 1.5E-13 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.77 T 12-10-2018 IPR026589 Cell division protein FtsP GO:0043093 YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Gene3D G3DSA:2.60.40.420 166 346 1.4E-54 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 SUPERFAMILY SSF49503 173 296 2.93E-31 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 Gene3D G3DSA:2.60.40.420 29 165 3.9E-31 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 SUPERFAMILY SSF49503 316 467 1.68E-17 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_0583 6e5604ad5a86953dd5a8daae25799c0b 474 SUPERFAMILY SSF49503 3 166 9.11E-26 T 12-10-2018 IPR008972 Cupredoxin YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 Gene3D G3DSA:1.10.1040.10 267 460 5.1E-44 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 202 440 1.3E-74 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 SUPERFAMILY SSF48179 268 455 1.63E-46 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 Gene3D G3DSA:3.40.50.720 1 265 2.3E-80 T 12-10-2018 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 SUPERFAMILY SSF51735 3 265 5.51E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 PRINTS PR00084 Mannitol dehydrogenase signature 232 247 1.2E-15 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 PRINTS PR00084 Mannitol dehydrogenase signature 162 175 1.2E-15 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 PRINTS PR00084 Mannitol dehydrogenase signature 202 215 1.2E-15 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 PRINTS PR00084 Mannitol dehydrogenase signature 12 22 1.2E-15 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_1812 171fe601697b9540c4ed6d70eedc0195 463 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 12 171 5.7E-36 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 SUPERFAMILY SSF56425 238 353 2.84E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 SUPERFAMILY SSF51905 9 447 2.44E-73 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.1E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 PIRSF PIRSF000171 339 531 2.3E-13 T 12-10-2018 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 PIRSF PIRSF000171 1 249 7.2E-23 T 12-10-2018 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 Gene3D G3DSA:3.50.50.60 10 404 4.0E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 Gene3D G3DSA:3.90.700.10 248 358 4.0E-154 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 7.3E-224 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 Gene3D G3DSA:1.20.58.100 425 533 5.0E-46 T 12-10-2018 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 Pfam PF00890 FAD binding domain 10 392 6.3E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-9 T 12-10-2018 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.2E-9 T 12-10-2018 YpsIP31758_1128 f903da6f565519178693449f7a3f515e 533 SUPERFAMILY SSF46977 425 525 6.8E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2369 07c23e56a12d22fc79c4984bc930474e 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 4.2E-74 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 YpsIP31758_2369 07c23e56a12d22fc79c4984bc930474e 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 1.2E-123 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Pfam PF03288 Poxvirus D5 protein-like 651 748 3.3E-20 T 12-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Gene3D G3DSA:3.40.50.300 442 614 2.5E-8 T 12-10-2018 YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Gene3D G3DSA:1.10.10.10 652 750 2.1E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 SMART SM00778 29 67 1.6E-19 T 12-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Pfam PF08273 Zinc-binding domain of primase-helicase 30 67 1.6E-17 T 12-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 SUPERFAMILY SSF46785 652 750 4.62E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 SMART SM00885 318 444 1.9E-20 T 12-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 SUPERFAMILY SSF57783 28 94 5.1E-10 T 12-10-2018 YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 SUPERFAMILY SSF52540 412 616 1.86E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Pfam PF13362 Toprim domain 181 279 3.7E-11 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_0890 35cb750c801688b43fa4224efa8c90eb 763 Pfam PF08706 D5 N terminal like 367 447 1.6E-7 T 12-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YpsIP31758_2149 64760a0ab26dc15767454cdde1024c2c 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 28.713 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YpsIP31758_2149 64760a0ab26dc15767454cdde1024c2c 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 197 7.1E-52 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_2149 64760a0ab26dc15767454cdde1024c2c 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 198 2.3E-102 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YpsIP31758_2149 64760a0ab26dc15767454cdde1024c2c 199 PIRSF PIRSF006102 1 199 5.3E-56 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_3337 3d63e0af5dda93ccb8b0bd576d363b37 251 Pfam PF03749 Sugar fermentation stimulation protein 21 232 2.4E-74 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein YpsIP31758_3337 3d63e0af5dda93ccb8b0bd576d363b37 251 Gene3D G3DSA:2.40.50.580 8 87 8.7E-28 T 12-10-2018 YpsIP31758_3337 3d63e0af5dda93ccb8b0bd576d363b37 251 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 11 239 4.6E-81 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein YpsIP31758_3337 3d63e0af5dda93ccb8b0bd576d363b37 251 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 8 241 56.077 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein YpsIP31758_3337 3d63e0af5dda93ccb8b0bd576d363b37 251 Gene3D G3DSA:3.40.1350.60 88 241 4.5E-56 T 12-10-2018 YpsIP31758_3186 8199fd83d235d6cac3f585315751d799 451 Gene3D G3DSA:3.40.640.10 29 290 6.7E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3186 8199fd83d235d6cac3f585315751d799 451 Gene3D G3DSA:3.90.1150.10 18 388 6.7E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3186 8199fd83d235d6cac3f585315751d799 451 SUPERFAMILY SSF53383 10 395 1.95E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3186 8199fd83d235d6cac3f585315751d799 451 Pfam PF00266 Aminotransferase class-V 20 356 8.1E-24 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 12-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Gene3D G3DSA:3.90.1150.10 421 600 6.6E-71 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 550 1.5E-194 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 SUPERFAMILY SSF53383 109 566 1.54E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Gene3D G3DSA:3.40.640.10 109 420 2.3E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 SUPERFAMILY SSF52172 1 108 2.44E-31 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Gene3D G3DSA:3.40.50.220 2 108 3.2E-23 T 12-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 PIRSF PIRSF009393 2 720 5.4E-291 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 2.6E-48 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 9.5E-22 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 SUPERFAMILY SSF55904 571 719 1.57E-46 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 YpsIP31758_0811 7e625baec96e567b38480f3393439148 720 Gene3D G3DSA:3.90.100.10 601 720 4.3E-41 T 12-10-2018 YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 SMART SM01152 7 83 8.3E-39 T 12-10-2018 IPR003746 Protein of unknown function DUF167 YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 6.4E-26 T 12-10-2018 IPR003746 Protein of unknown function DUF167 YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 SUPERFAMILY SSF69786 4 95 1.83E-32 T 12-10-2018 IPR036591 YggU-like superfamily YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.522 T 12-10-2018 IPR003746 Protein of unknown function DUF167 YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 2.3E-30 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 YpsIP31758_0827 50f776440ef7d13c6d422092d0abb9c9 96 Gene3D G3DSA:3.30.1200.10 1 96 6.6E-36 T 12-10-2018 IPR036591 YggU-like superfamily YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:3.10.20.30 3 106 8.7E-35 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.1E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF54292 4 106 7.01E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:1.10.1060.10 107 244 4.4E-51 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 3.2E-97 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 8.7E-32 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_3668 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF46548 107 229 7.32E-32 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SMART SM01211 1040 1295 1.6E-155 T 12-10-2018 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF109736 154 219 2.22E-21 T 12-10-2018 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF55326 220 427 4.19E-64 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF56042 822 1033 2.84E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.90.650.10 808 981 5.0E-27 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF82697 1 151 8.37E-53 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF56042 430 614 1.09E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:1.10.8.750 152 212 1.3E-28 T 12-10-2018 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 966 4.8E-13 T 12-10-2018 IPR010918 PurM-like, C-terminal domain YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 584 6.0E-26 T 12-10-2018 IPR010918 PurM-like, C-terminal domain YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.90.650.10 419 605 1.8E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.381 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF55326 618 815 3.66E-66 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.30.1330.10 213 418 7.7E-43 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 7.6E-103 T 12-10-2018 YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.40.50.880 982 1296 2.6E-139 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 Gene3D G3DSA:3.30.1330.10 614 807 4.9E-24 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1147 ff9b150524e73144cb4811ba4a3927f4 1296 SUPERFAMILY SSF52317 1036 1294 7.92E-97 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_4117 8c15f19107be5d110242f83faacf5f75 224 Pfam PF01292 Prokaryotic cytochrome b561 9 184 2.7E-23 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YpsIP31758_4117 8c15f19107be5d110242f83faacf5f75 224 Gene3D G3DSA:1.20.950.20 1 214 1.4E-73 T 12-10-2018 YpsIP31758_4117 8c15f19107be5d110242f83faacf5f75 224 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 8.4E-66 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 YpsIP31758_4117 8c15f19107be5d110242f83faacf5f75 224 SUPERFAMILY SSF81342 4 206 1.65E-55 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF142984 257 339 6.28E-22 T 12-10-2018 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 Gene3D G3DSA:3.10.20.600 248 342 2.1E-28 T 12-10-2018 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 2.9E-201 T 12-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 SMART SM00928 345 390 2.4E-21 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF140490 343 433 7.72E-31 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.6E-50 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 5.1E-26 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 Gene3D G3DSA:1.20.1440.230 343 443 1.1E-27 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF142019 23 252 1.31E-85 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1458 0299365bfc70e93586f992d66e8cb26e 461 Gene3D G3DSA:3.40.50.11540 66 245 2.0E-78 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 Gene3D G3DSA:3.40.640.10 55 259 9.1E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 55.424 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 SUPERFAMILY SSF53383 5 353 2.86E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 Gene3D G3DSA:3.90.1150.10 10 348 9.1E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 Pfam PF00155 Aminotransferase class I and II 47 352 2.4E-62 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 6.3E-122 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 YpsIP31758_2430 2bca0582a59ef09272e9fca71a86abe6 382 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 2.7E-53 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 Pfam PF07972 NrdI Flavodoxin like 5 123 2.6E-47 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 PIRSF PIRSF005087 1 134 2.8E-54 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 Gene3D G3DSA:3.40.50.360 3 134 5.8E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 SUPERFAMILY SSF52218 1 132 2.69E-23 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1064 16925d89f717312ac146e565ec59ae94 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 36.262 T 12-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:2.160.10.10 228 456 2.6E-72 T 12-10-2018 YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 1.2E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 8.4E-205 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF51161 255 438 1.66E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.326 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 2.4E-4 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 3.1E-4 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:3.90.550.10 1 227 9.9E-75 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_4174 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF53448 5 252 5.42E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 PRINTS PR00207 Flagellin signature 37 54 3.3E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 PRINTS PR00207 Flagellin signature 111 134 3.3E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 PRINTS PR00207 Flagellin signature 76 95 3.3E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 Pfam PF00700 Bacterial flagellin C-terminal helical region 309 391 9.4E-16 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 Gene3D G3DSA:1.20.1330.10 45 343 9.2E-50 T 12-10-2018 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 Gene3D G3DSA:1.10.8.410 344 393 9.0E-10 T 12-10-2018 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.3E-28 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 SUPERFAMILY SSF64518 1 393 1.1E-69 T 12-10-2018 YpsIP31758_0654 400a0c06449ce72a3f5728fea7ebac6d 394 Gene3D G3DSA:3.30.70.2120 174 291 9.2E-50 T 12-10-2018 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 3.5E-78 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.40.190.10 6 216 1.4E-84 T 12-10-2018 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PIRSF PIRSF001438 1 311 4.3E-122 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.7E-22 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 SUPERFAMILY SSF53850 5 219 9.99E-86 T 12-10-2018 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.40.190.10 100 199 1.4E-84 T 12-10-2018 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.498 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.30.160.40 221 306 8.0E-31 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 SUPERFAMILY SSF54782 220 309 7.85E-29 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.0E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.0E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.0E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.0E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.0E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0198 fca16cdaad2657b3c20f37caff649821 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.5E-113 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_2895 217ff9ffe9f0d21b61410ce8e1f80c78 176 Gene3D G3DSA:1.10.150.130 111 171 1.2E-14 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_2895 217ff9ffe9f0d21b61410ce8e1f80c78 176 Pfam PF13356 Arm DNA-binding domain 8 94 2.2E-17 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_2895 217ff9ffe9f0d21b61410ce8e1f80c78 176 Gene3D G3DSA:3.30.160.390 6 110 4.6E-29 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_2895 217ff9ffe9f0d21b61410ce8e1f80c78 176 SUPERFAMILY SSF56349 108 170 5.53E-5 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 SUPERFAMILY SSF56655 2 327 3.38E-110 T 12-10-2018 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 7.8E-73 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PIRSF PIRSF000904 1 333 7.7E-122 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 Gene3D G3DSA:3.40.190.80 197 334 2.5E-58 T 12-10-2018 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 Gene3D G3DSA:3.30.540.10 1 195 6.8E-73 T 12-10-2018 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 PIRSF PIRSF500210 1 332 1.2E-124 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 4.0E-78 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3621 20c32bef81fca6c59c4d03218f4542da 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.129 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 SUPERFAMILY SSF82607 11 104 1.57E-34 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 PIRSF PIRSF004555 3 110 7.8E-39 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.965 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 3.4E-41 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 4.3E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YpsIP31758_3058 6140810bea07c4c4c7ed660db78322e5 110 Gene3D G3DSA:3.30.1310.10 1 110 7.6E-47 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 7 332 6.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.30.390.30 345 464 2.7E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 5.4E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.7E-52 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 158 276 6.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.5E-27 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 7.5E-27 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 7.5E-27 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.5E-27 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.5E-27 T 12-10-2018 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.4E-59 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 PIRSF PIRSF000350 1 463 1.4E-71 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.793 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 YpsIP31758_0137 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF51905 1 322 1.04E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0964 3429a2cdd297488ba56c05b7af7c037a 219 SMART SM00862 22 95 2.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0964 3429a2cdd297488ba56c05b7af7c037a 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 95 4.3E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0964 3429a2cdd297488ba56c05b7af7c037a 219 SUPERFAMILY SSF46894 2 95 1.7E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_0964 3429a2cdd297488ba56c05b7af7c037a 219 Gene3D G3DSA:1.10.10.10 1 104 1.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0822 81a36ff955bdf067785f6cf50fd1ad61 308 Gene3D G3DSA:3.40.710.10 4 308 1.1E-111 T 12-10-2018 YpsIP31758_0822 81a36ff955bdf067785f6cf50fd1ad61 308 SUPERFAMILY SSF56601 8 308 3.28E-116 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_0822 81a36ff955bdf067785f6cf50fd1ad61 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.5E-133 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_0822 81a36ff955bdf067785f6cf50fd1ad61 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.133 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_0822 81a36ff955bdf067785f6cf50fd1ad61 308 Pfam PF04960 Glutaminase 24 308 5.7E-115 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_3640 8b068f03ea4c4134626fccee779662ed 249 SUPERFAMILY SSF53474 13 249 3.02E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3640 8b068f03ea4c4134626fccee779662ed 249 Gene3D G3DSA:3.40.50.1820 2 249 2.5E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3640 8b068f03ea4c4134626fccee779662ed 249 Pfam PF00326 Prolyl oligopeptidase family 89 234 3.4E-13 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YpsIP31758_3060 2e58ff2f637f109514aee3cf798b2aa0 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.792 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 YpsIP31758_3060 2e58ff2f637f109514aee3cf798b2aa0 187 Gene3D G3DSA:3.40.50.2020 2 187 1.0E-70 T 12-10-2018 YpsIP31758_3060 2e58ff2f637f109514aee3cf798b2aa0 187 Pfam PF00156 Phosphoribosyl transferase domain 35 164 2.1E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_3060 2e58ff2f637f109514aee3cf798b2aa0 187 SUPERFAMILY SSF53271 17 184 1.56E-53 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_3060 2e58ff2f637f109514aee3cf798b2aa0 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 1.7E-73 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 Gene3D G3DSA:2.60.40.10 152 243 1.4E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 149 3.8E-39 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 PRINTS PR00969 Pili chaperone signature 168 183 2.8E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 PRINTS PR00969 Pili chaperone signature 76 97 2.8E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 PRINTS PR00969 Pili chaperone signature 130 145 2.8E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 PRINTS PR00969 Pili chaperone signature 104 121 2.8E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 PRINTS PR00969 Pili chaperone signature 27 36 2.8E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 236 1.6E-12 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 SUPERFAMILY SSF49354 21 148 4.45E-38 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 Gene3D G3DSA:2.60.40.10 28 149 1.7E-38 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2164 07dcb59065990b2c779bb9461f45d426 243 SUPERFAMILY SSF49584 166 241 3.66E-13 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_3351 f9cafba0b2e19296ef832cb6d033f5cc 181 SUPERFAMILY SSF53271 5 177 4.06E-55 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_3351 f9cafba0b2e19296ef832cb6d033f5cc 181 Pfam PF00156 Phosphoribosyl transferase domain 15 163 1.1E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_3351 f9cafba0b2e19296ef832cb6d033f5cc 181 Gene3D G3DSA:3.40.50.2020 2 180 1.0E-65 T 12-10-2018 YpsIP31758_3351 f9cafba0b2e19296ef832cb6d033f5cc 181 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 176 8.7E-74 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 YpsIP31758_A0052 295d424aea4de15373b425830cc4da4b 295 Gene3D G3DSA:2.60.40.2500 186 294 2.0E-8 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily YpsIP31758_A0052 295d424aea4de15373b425830cc4da4b 295 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 68 281 7.3E-82 T 12-10-2018 IPR014142 P-type conjugative transfer protein TrbG YpsIP31758_A0052 295d424aea4de15373b425830cc4da4b 295 Pfam PF03524 Conjugal transfer protein 78 293 2.3E-53 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX YpsIP31758_3012 2878b653f957cd700013190623ede902 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.8E-67 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF51735 123 285 1.39E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3012 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF53223 3 122 1.15E-39 T 12-10-2018 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.244 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.50.10860 8 276 8.4E-106 T 12-10-2018 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.2E-39 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.50.720 6 259 8.4E-106 T 12-10-2018 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_3012 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.3E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.062 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 Gene3D G3DSA:3.90.79.10 1 160 4.6E-53 T 12-10-2018 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 SUPERFAMILY SSF55811 6 155 4.6E-33 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_0981 653463b6538c0dcac193641c1c3155d2 175 Pfam PF00293 NUDIX domain 7 146 1.0E-28 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.368 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF00549 CoA-ligase 262 382 4.4E-24 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.470.20 1 234 2.9E-97 T 12-10-2018 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF08442 ATP-grasp domain 2 203 2.9E-83 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.1490.20 21 104 2.9E-97 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 12-10-2018 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.40.50.261 240 387 2.3E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 PIRSF PIRSF001554 1 388 1.6E-155 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 8.6E-182 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2879 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF52210 240 385 1.96E-52 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 12-10-2018 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 SUPERFAMILY SSF51998 4 758 2.35E-289 T 12-10-2018 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF01228 Glycine radical 630 741 3.5E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 1.1E-205 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 YpsIP31758_2589 480d15168e7aaadd8a146dbfcb608a34 760 PIRSF PIRSF000379 8 760 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Gene3D G3DSA:3.55.50.10 112 208 5.9E-57 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Pfam PF05954 Phage late control gene D protein (GPD) 34 353 1.4E-63 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 1.3E-182 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 SUPERFAMILY SSF69279 204 383 2.38E-48 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 754 6.6E-51 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 SUPERFAMILY SSF69255 382 471 1.62E-25 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Gene3D G3DSA:3.30.1920.30 241 312 5.9E-57 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Gene3D G3DSA:2.30.110.50 28 343 5.9E-57 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 515 3.1E-72 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 3.1E-35 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 SUPERFAMILY SSF69279 23 203 9.07E-49 T 12-10-2018 YpsIP31758_0788 15f0dd6bf5351215a806af86683e3cf2 900 Gene3D G3DSA:2.40.50.230 388 471 3.7E-34 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.104 T 12-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 SUPERFAMILY SSF54534 49 126 6.15E-18 T 12-10-2018 YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF14760 Rnk N-terminus 4 43 2.0E-12 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 PIRSF PIRSF006092 28 128 7.3E-23 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 9.6E-18 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:1.10.286.20 1 44 1.0E-25 T 12-10-2018 YpsIP31758_0429 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:3.10.50.30 45 136 3.0E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:1.10.3210.10 311 519 1.6E-87 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 138 311 1.13E-47 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.150 118 296 2.6E-97 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF109604 314 507 8.63E-55 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 307 3.2E-101 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.40 15 304 2.6E-97 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 PIRSF PIRSF001267 4 507 2.0E-203 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 14 134 4.98E-37 T 12-10-2018 YpsIP31758_1226 9debccb20f1d1c51c19e4e6aa2b05559 519 Pfam PF02541 Ppx/GppA phosphatase family 27 309 1.6E-98 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 YpsIP31758_0173 fdcb6943822b008ea66287d84bdef0c1 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-24 T 12-10-2018 YpsIP31758_0173 fdcb6943822b008ea66287d84bdef0c1 93 Gene3D G3DSA:3.10.50.40 2 93 2.6E-37 T 12-10-2018 YpsIP31758_0173 fdcb6943822b008ea66287d84bdef0c1 93 SUPERFAMILY SSF54534 4 90 2.68E-30 T 12-10-2018 YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 Pfam PF03797 Autotransporter beta-domain 1009 1261 2.0E-34 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 SUPERFAMILY SSF51126 408 951 1.98E-28 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 SUPERFAMILY SSF103515 968 1285 2.22E-39 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 Gene3D G3DSA:2.40.128.130 960 1285 1.9E-63 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 837 1285 9.4E-80 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 Gene3D G3DSA:2.160.20.20 771 953 2.1E-33 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_3775 7379637215b1d741ff5ac4612871c42f 1285 SMART SM00869 1006 1270 6.0E-35 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 SUPERFAMILY SSF53187 1 320 7.61E-88 T 12-10-2018 YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 9.6E-153 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 322 2.2E-73 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 330 147.608 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 Gene3D G3DSA:3.40.630.10 1 327 9.3E-112 T 12-10-2018 YpsIP31758_2117 cad24af0f4ad682afbbd80407032a8aa 330 PIRSF PIRSF017020 1 327 7.4E-125 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.10.20.30 399 472 3.1E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13328 HD domain 46 191 2.6E-41 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:1.10.3210.10 27 207 7.1E-39 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.3E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.460.10 209 341 6.4E-50 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13291 ACT domain 664 740 1.7E-17 T 12-10-2018 IPR002912 ACT domain YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81301 196 409 2.62E-64 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF55021 665 741 1.49E-13 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 SMART SM00954 251 361 3.5E-66 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.70.260 663 743 4.9E-18 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.5E-187 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF109604 25 207 7.22E-46 T 12-10-2018 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF02824 TGS domain 405 464 2.1E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 YpsIP31758_3319 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81271 398 464 2.62E-22 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YpsIP31758_2443 7b0cdda89e75f686b75f46fd47a087ae 346 SUPERFAMILY SSF81345 20 339 1.96E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_2443 7b0cdda89e75f686b75f46fd47a087ae 346 Pfam PF01032 FecCD transport family 35 339 4.3E-75 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_2443 7b0cdda89e75f686b75f46fd47a087ae 346 Gene3D G3DSA:1.10.3470.10 21 345 5.8E-72 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_1793 f9e9eae116cee3014d7b8d3d446688a6 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 4.1E-14 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 YpsIP31758_1793 f9e9eae116cee3014d7b8d3d446688a6 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 147 1.1E-54 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 YpsIP31758_0754 3e51101ec9c48b155495f8924a51ef39 273 Pfam PF06067 Domain of unknown function (DUF932) 38 262 7.2E-52 T 12-10-2018 IPR026325 Protein of unknown function DUF932 YpsIP31758_2328 430dda5075112198f0b9261ad7d0b35b 146 Gene3D G3DSA:1.20.58.300 3 120 1.4E-13 T 12-10-2018 YpsIP31758_2328 430dda5075112198f0b9261ad7d0b35b 146 SUPERFAMILY SSF140566 2 120 1.2E-19 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 YpsIP31758_2328 430dda5075112198f0b9261ad7d0b35b 146 Pfam PF05130 FlgN protein 2 135 1.6E-26 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.6E-52 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.3E-33 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:1.10.8.50 1 71 7.0E-27 T 12-10-2018 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 PIRSF PIRSF002134 1 118 7.3E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 SUPERFAMILY SSF46946 2 114 2.06E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:4.10.910.10 72 118 2.3E-25 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3893 27f9ad9f09ec293cd83e76776f5acb21 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.012 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 Gene3D G3DSA:1.20.1340.10 1 81 2.5E-29 T 12-10-2018 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 SUPERFAMILY SSF53383 1 470 1.89E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 Gene3D G3DSA:3.40.640.10 84 369 5.1E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 402 4.1E-97 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 Gene3D G3DSA:3.90.1150.10 370 471 1.3E-11 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 342 357 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 385 404 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2788 6e6aafc0eb4ebe36c410d5d41ec89eb2 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 4.6E-43 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2641 5913a79e5ec716de6bebdc61064e6c53 154 Pfam PF10767 Protein of unknown function (DUF2593) 11 148 2.1E-63 T 12-10-2018 IPR019703 Protein of unknown function DUF2593 YpsIP31758_2803 5534780c015cc6efd68a642d6e5890b0 113 SMART SM00507 15 70 3.0E-4 T 12-10-2018 IPR003615 HNH nuclease YpsIP31758_2803 5534780c015cc6efd68a642d6e5890b0 113 Pfam PF01844 HNH endonuclease 27 75 8.4E-10 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 YpsIP31758_2793 ad0f8cd953a102ead1b1b7c2874cfbaf 515 Gene3D G3DSA:1.25.10.10 93 215 7.1E-9 T 12-10-2018 IPR011989 Armadillo-like helical YpsIP31758_2793 ad0f8cd953a102ead1b1b7c2874cfbaf 515 SUPERFAMILY SSF48371 104 211 1.04E-11 T 12-10-2018 IPR016024 Armadillo-type fold YpsIP31758_2793 ad0f8cd953a102ead1b1b7c2874cfbaf 515 Pfam PF13646 HEAT repeats 158 212 1.0E-8 T 12-10-2018 YpsIP31758_2793 ad0f8cd953a102ead1b1b7c2874cfbaf 515 Pfam PF02653 Branched-chain amino acid transport system / permease component 223 498 1.4E-49 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2793 ad0f8cd953a102ead1b1b7c2874cfbaf 515 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 221 512 6.1E-129 T 12-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type YpsIP31758_0772 df805d95a92ac9d3d0f29d810e92099e 294 Pfam PF02195 ParB-like nuclease domain 28 90 6.3E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_0772 df805d95a92ac9d3d0f29d810e92099e 294 SUPERFAMILY SSF109709 100 181 5.23E-8 T 12-10-2018 YpsIP31758_0772 df805d95a92ac9d3d0f29d810e92099e 294 Pfam PF07506 RepB plasmid partitioning protein 97 275 9.3E-22 T 12-10-2018 IPR011111 RepB plasmid partition YpsIP31758_0772 df805d95a92ac9d3d0f29d810e92099e 294 Gene3D G3DSA:3.90.1530.10 9 101 1.7E-5 T 12-10-2018 YpsIP31758_0772 df805d95a92ac9d3d0f29d810e92099e 294 SUPERFAMILY SSF110849 12 90 5.41E-10 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:3.20.20.80 336 823 1.9E-164 T 12-10-2018 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 1.2E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:2.60.40.290 28 169 1.4E-61 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF55545 206 337 5.23E-27 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 1.5E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF81296 786 889 6.3E-39 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 6.0E-109 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 2.6E-32 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF49384 29 199 9.83E-71 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Pfam PF03173 Putative carbohydrate binding domain 38 196 1.9E-69 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:3.30.379.10 209 335 4.3E-22 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 Gene3D G3DSA:2.60.40.10 824 889 2.9E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 SUPERFAMILY SSF51445 338 778 5.9E-139 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_2903 4988dd1149bfee988e4649ef7f102572 891 SMART SM01081 36 197 5.5E-103 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 SUPERFAMILY SSF46689 217 268 1.25E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 SMART SM00342 181 264 5.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 Pfam PF12833 Helix-turn-helix domain 192 265 9.2E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 Gene3D G3DSA:1.10.10.60 164 267 5.4E-19 T 12-10-2018 YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 Gene3D G3DSA:2.60.120.10 7 96 4.5E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 Pfam PF07883 Cupin domain 21 73 1.4E-6 T 12-10-2018 IPR013096 Cupin 2, conserved barrel YpsIP31758_1094 97ddc4f14d86b7b837cf137b415c11d9 276 SUPERFAMILY SSF51182 5 86 6.45E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_B0025 72eac2309a1242a1d0b9fdb5bebec999 500 SUPERFAMILY SSF52540 18 448 8.89E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0025 72eac2309a1242a1d0b9fdb5bebec999 500 Gene3D G3DSA:3.40.50.300 309 496 1.1E-15 T 12-10-2018 YpsIP31758_B0025 72eac2309a1242a1d0b9fdb5bebec999 500 Gene3D G3DSA:3.40.50.300 2 125 3.8E-9 T 12-10-2018 YpsIP31758_B0025 72eac2309a1242a1d0b9fdb5bebec999 500 Pfam PF01935 Domain of unknown function DUF87 9 76 2.8E-8 T 12-10-2018 IPR002789 Helicase HerA, central domain YpsIP31758_0620 6774f1c69cc7ca0da5c3b8a22d0791df 192 Pfam PF11153 Protein of unknown function (DUF2931) 12 191 5.6E-39 T 12-10-2018 IPR021326 Protein of unknown function DUF2931 YpsIP31758_3231 f196abcf943032a8dfa2bd4434bb96d8 263 Pfam PF01578 Cytochrome C assembly protein 37 261 7.1E-42 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:2.70.20.10 219 479 4.6E-164 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 3.5E-255 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:3.30.65.10 751 813 5.5E-32 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:3.30.65.10 705 750 5.6E-6 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 55.136 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.8E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.8E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.8E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.8E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.8E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SUPERFAMILY SSF57783 751 813 3.57E-19 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:3.40.50.140 1 169 3.0E-67 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SUPERFAMILY SSF56712 3 615 5.62E-202 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:1.10.460.10 171 577 4.6E-164 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SUPERFAMILY SSF57783 706 749 2.21E-7 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:2.20.25.10 814 871 8.0E-31 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SMART SM00493 3 138 1.3E-34 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SUPERFAMILY SSF57783 815 870 1.63E-22 T 12-10-2018 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SMART SM00436 139 227 1.0E-47 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF01751 Toprim domain 5 148 8.6E-33 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.1E-11 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.9E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Gene3D G3DSA:1.10.290.10 286 410 4.6E-164 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 SMART SM00437 278 533 1.2E-119 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 1.0E-23 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 2.9E-12 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YpsIP31758_1923 c087875876f3687224fa822a14319ccc 871 Pfam PF01131 DNA topoisomerase 163 571 2.2E-126 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_1903 cdb431561e4472e678574f410cecbad7 436 Gene3D G3DSA:1.20.1250.20 10 434 4.4E-88 T 12-10-2018 YpsIP31758_1903 cdb431561e4472e678574f410cecbad7 436 SUPERFAMILY SSF103473 16 430 3.53E-89 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1903 cdb431561e4472e678574f410cecbad7 436 Pfam PF07690 Major Facilitator Superfamily 33 395 4.2E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2433 6377f52f90382ea2df5efac1bbe4999c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.9E-79 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 YpsIP31758_2433 6377f52f90382ea2df5efac1bbe4999c 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.4E-77 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 YpsIP31758_2433 6377f52f90382ea2df5efac1bbe4999c 245 Gene3D G3DSA:3.20.20.70 1 245 8.2E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2433 6377f52f90382ea2df5efac1bbe4999c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.291 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 YpsIP31758_2433 6377f52f90382ea2df5efac1bbe4999c 245 SUPERFAMILY SSF51366 1 242 6.53E-66 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 Gene3D G3DSA:1.10.10.10 6 91 5.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 Gene3D G3DSA:3.40.190.290 94 297 4.9E-60 T 12-10-2018 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 SUPERFAMILY SSF46785 7 114 2.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 SUPERFAMILY SSF53850 92 299 6.52E-46 T 12-10-2018 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.6E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2818 7d56ff2b452d4b69742d6c83554ac8f5 303 Pfam PF03466 LysR substrate binding domain 92 296 1.7E-42 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 91 205 2.7E-31 T 12-10-2018 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 277 346 1.6E-5 T 12-10-2018 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 347 359 1.6E-5 T 12-10-2018 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 56 2.9E-5 T 12-10-2018 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:1.10.10.10 8 76 1.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF00480 ROK family 94 242 6.9E-18 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF46785 12 76 1.76E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 206 243 2.7E-31 T 12-10-2018 YpsIP31758_2054 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF53067 81 365 6.2E-32 T 12-10-2018 YpsIP31758_3560 80ebbf7e31732354ef9cb15aa4642d03 158 Pfam PF06754 Phosphonate metabolism protein PhnG 7 156 5.0E-52 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3560 80ebbf7e31732354ef9cb15aa4642d03 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 157 6.0E-54 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 Gene3D G3DSA:2.60.300.12 9 114 4.3E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.5E-20 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 5.5E-39 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 SUPERFAMILY SSF89360 8 103 7.06E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 YpsIP31758_3328 05ca593d44188ecfc850e31a12e1ca05 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.686 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 YpsIP31758_0231 cbb51e6ed47c8b52c98d722bdd184353 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.4E-33 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 YpsIP31758_0231 cbb51e6ed47c8b52c98d722bdd184353 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 15.282 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 YpsIP31758_0231 cbb51e6ed47c8b52c98d722bdd184353 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 2.6E-62 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 YpsIP31758_2595 9ff00a98206223fc4824a56760b99352 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 202 1.3E-97 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YpsIP31758_2595 9ff00a98206223fc4824a56760b99352 202 Gene3D G3DSA:2.50.20.10 20 202 8.9E-54 T 12-10-2018 YpsIP31758_2595 9ff00a98206223fc4824a56760b99352 202 SUPERFAMILY SSF89392 23 202 9.02E-56 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX YpsIP31758_2595 9ff00a98206223fc4824a56760b99352 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 32.008 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YpsIP31758_2595 9ff00a98206223fc4824a56760b99352 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 8.4E-58 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YpsIP31758_3810 df00ed16502d8f767b3ef086b4bd579a 404 Pfam PF04143 Sulphur transport 5 160 9.6E-25 T 12-10-2018 IPR007272 Sulphur transport domain YpsIP31758_3810 df00ed16502d8f767b3ef086b4bd579a 404 Pfam PF04143 Sulphur transport 237 390 1.1E-24 T 12-10-2018 IPR007272 Sulphur transport domain YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 Gene3D G3DSA:1.10.10.10 25 98 1.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 SMART SM00345 32 95 2.9E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 Gene3D G3DSA:3.40.1410.10 99 260 1.9E-45 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 SMART SM00866 115 251 7.9E-38 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 4.0E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 4.0E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 93 2.1E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 Pfam PF07702 UTRA domain 115 251 2.0E-38 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 SUPERFAMILY SSF64288 102 256 1.51E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_2176 e661caa72856bbea75682bff0fb0f4ad 264 SUPERFAMILY SSF46785 28 98 3.42E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SMART SM00342 192 275 9.8E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Pfam PF12833 Helix-turn-helix domain 206 277 1.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SUPERFAMILY SSF51182 16 91 3.2E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 54.282 T 12-10-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 6.7E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 6.7E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Gene3D G3DSA:1.10.10.60 174 279 5.7E-26 T 12-10-2018 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Gene3D G3DSA:2.60.120.10 8 97 1.6E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 Pfam PF02311 AraC-like ligand binding domain 23 141 1.5E-15 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YpsIP31758_3753 fbc1eccb924f1c8c2b77c49d4d3fab29 290 SUPERFAMILY SSF46689 228 280 5.82E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF53223 4 102 2.24E-31 T 12-10-2018 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.2E-96 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 33.12 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 1.0E-10 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF51735 103 269 6.27E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.9E-25 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.50.10860 6 255 1.8E-85 T 12-10-2018 YpsIP31758_3877 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.50.720 103 245 1.8E-85 T 12-10-2018 YpsIP31758_2110 ba4b2541b88e74da8782907cf02e29c8 190 SUPERFAMILY SSF51182 1 187 1.69E-54 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_2110 ba4b2541b88e74da8782907cf02e29c8 190 Gene3D G3DSA:2.60.120.10 115 157 5.8E-38 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_2110 ba4b2541b88e74da8782907cf02e29c8 190 Pfam PF05962 HutD 14 167 7.7E-52 T 12-10-2018 IPR010282 Uncharacterised protein family HutD/Ves YpsIP31758_2110 ba4b2541b88e74da8782907cf02e29c8 190 Gene3D G3DSA:2.60.120.10 14 114 5.8E-38 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_2250 72d97403ea41ceaf787dd36299d8f27e 338 SUPERFAMILY SSF56349 61 325 2.06E-46 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_2250 72d97403ea41ceaf787dd36299d8f27e 338 Gene3D G3DSA:1.10.443.10 165 329 5.0E-21 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_2250 72d97403ea41ceaf787dd36299d8f27e 338 Gene3D G3DSA:1.10.150.130 57 164 3.2E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_2250 72d97403ea41ceaf787dd36299d8f27e 338 Pfam PF00589 Phage integrase family 165 325 6.8E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Pfam PF13361 UvrD-like helicase C-terminal domain 517 808 4.6E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Gene3D G3DSA:1.10.3170.10 156 349 4.6E-163 T 12-10-2018 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Gene3D G3DSA:3.40.50.300 445 846 8.9E-173 T 12-10-2018 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1193 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 SUPERFAMILY SSF52980 903 1195 1.39E-89 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 SUPERFAMILY SSF52540 12 819 7.62E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 436 2.3E-59 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1194 23.095 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Gene3D G3DSA:1.10.486.10 583 728 8.9E-173 T 12-10-2018 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Gene3D G3DSA:3.40.50.300 9 436 4.6E-163 T 12-10-2018 YpsIP31758_0991 26d789254971945a8d7b8156819599d5 1220 Gene3D G3DSA:3.90.320.10 892 1200 1.7E-111 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF57716 217 268 3.99E-17 T 12-10-2018 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.4E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.284 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.5E-25 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SMART SM00898 2 115 8.4E-54 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Gene3D G3DSA:3.20.190.10 2 128 3.8E-43 T 12-10-2018 IPR035937 MutM-like, N-terminal YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.6E-101 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.5E-30 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF81624 2 138 2.75E-43 T 12-10-2018 IPR035937 MutM-like, N-terminal YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SMART SM01232 129 221 1.0E-47 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 Gene3D G3DSA:1.10.8.50 139 269 3.2E-46 T 12-10-2018 YpsIP31758_0064 7ccae4c6c6c2ed5f7e6fbaca8903dffe 269 SUPERFAMILY SSF46946 130 222 2.75E-29 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Pfam PF01565 FAD binding domain 33 181 7.5E-12 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:3.40.462.20 226 508 6.0E-121 T 12-10-2018 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF51055 634 678 4.71E-8 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:3.30.465.40 10 525 6.0E-121 T 12-10-2018 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Pfam PF08031 Berberine and berberine like 480 536 5.5E-12 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF49265 536 637 1.23E-16 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:2.60.40.10 541 628 4.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 Gene3D G3DSA:2.10.10.20 632 680 1.8E-7 T 12-10-2018 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 SUPERFAMILY SSF56176 5 221 7.48E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_3776 f45b13a38687050977bfbb2a8743cc21 685 SMART SM00060 542 617 3.3E-4 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 YpsIP31758_4046 1c3093d7f8dbfa315346a5486c0b6a46 189 Pfam PF00589 Phage integrase family 124 189 5.6E-9 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_4046 1c3093d7f8dbfa315346a5486c0b6a46 189 Gene3D G3DSA:1.10.443.10 118 189 2.3E-12 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_4046 1c3093d7f8dbfa315346a5486c0b6a46 189 SUPERFAMILY SSF56349 32 189 2.21E-23 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_4046 1c3093d7f8dbfa315346a5486c0b6a46 189 Gene3D G3DSA:1.10.150.130 2 115 2.3E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0023 f8a5ce43d61b02896d15f83becd20f93 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.434 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 YpsIP31758_0023 f8a5ce43d61b02896d15f83becd20f93 188 Pfam PF04220 Der GTPase activator (YihI) 20 179 1.1E-56 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 YpsIP31758_3548 40c72c776434f96a939bc99fc4845be9 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.951 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B YpsIP31758_3548 40c72c776434f96a939bc99fc4845be9 143 SUPERFAMILY SSF89946 3 123 5.62E-42 T 12-10-2018 IPR036701 RraB-like superfamily YpsIP31758_3548 40c72c776434f96a939bc99fc4845be9 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.6E-34 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain YpsIP31758_3548 40c72c776434f96a939bc99fc4845be9 143 PIRSF PIRSF018193 1 143 2.2E-68 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B YpsIP31758_3548 40c72c776434f96a939bc99fc4845be9 143 Gene3D G3DSA:3.30.70.970 1 125 2.3E-49 T 12-10-2018 IPR036701 RraB-like superfamily YpsIP31758_1647 7281f707051d42cbc207aac299893beb 214 PIRSF PIRSF002884 1 214 1.5E-87 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 YpsIP31758_1647 7281f707051d42cbc207aac299893beb 214 SUPERFAMILY SSF75708 13 213 2.35E-65 T 12-10-2018 YpsIP31758_1647 7281f707051d42cbc207aac299893beb 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 1.0E-75 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 YpsIP31758_1647 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.20.5.590 6 34 5.7E-12 T 12-10-2018 YpsIP31758_1647 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.10.287.500 35 168 2.6E-51 T 12-10-2018 YpsIP31758_2039 535ccdcb1ed775bfe2513948b6b55e60 323 SUPERFAMILY SSF53335 89 317 1.92E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2039 535ccdcb1ed775bfe2513948b6b55e60 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 1.4E-145 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 YpsIP31758_2039 535ccdcb1ed775bfe2513948b6b55e60 323 Gene3D G3DSA:3.40.50.150 90 323 7.5E-22 T 12-10-2018 YpsIP31758_2039 535ccdcb1ed775bfe2513948b6b55e60 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.3E-164 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like YpsIP31758_2039 535ccdcb1ed775bfe2513948b6b55e60 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.105 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 SUPERFAMILY SSF51735 7 213 5.46E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 Pfam PF00106 short chain dehydrogenase 7 189 2.7E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2093 5471ff4497bf34d72f896090120eaf0f 226 Gene3D G3DSA:3.40.50.720 6 224 2.3E-52 T 12-10-2018 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 SUPERFAMILY SSF54719 82 191 1.83E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 4.8E-35 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 Gene3D G3DSA:1.10.287.990 20 82 7.0E-27 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 SUPERFAMILY SSF46609 1 83 1.83E-36 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.0E-40 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 Gene3D G3DSA:2.40.500.20 83 192 3.3E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.4E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1756 390e431b86a5bce7afc30fad2d3d487f 192 PIRSF PIRSF000349 1 192 5.0E-87 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_3050 7051d6acdfd926fecb7d3cf4484beda0 391 Gene3D G3DSA:3.40.50.720 35 227 3.4E-51 T 12-10-2018 YpsIP31758_3050 7051d6acdfd926fecb7d3cf4484beda0 391 SUPERFAMILY SSF51735 39 382 3.52E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3050 7051d6acdfd926fecb7d3cf4484beda0 391 Gene3D G3DSA:3.90.25.10 228 391 6.1E-72 T 12-10-2018 YpsIP31758_3050 7051d6acdfd926fecb7d3cf4484beda0 391 Pfam PF16363 GDP-mannose 4,6 dehydratase 47 361 1.2E-33 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_3050 7051d6acdfd926fecb7d3cf4484beda0 391 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 40 388 3.4E-160 T 12-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 SMART SM00060 333 406 1.0E-6 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 Pfam PF00704 Glycosyl hydrolases family 18 22 299 4.3E-31 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 SUPERFAMILY SSF51055 424 467 1.57E-12 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 SUPERFAMILY SSF51445 19 311 2.38E-50 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 SUPERFAMILY SSF49265 332 417 5.41E-14 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 Gene3D G3DSA:2.60.40.10 332 417 1.5E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 SMART SM00636 20 299 0.0083 T 12-10-2018 IPR011583 Chitinase II GO:0008061 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 ProSitePatterns PS01095 Chitinases family 18 active site. 128 136 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 Gene3D G3DSA:2.10.10.20 422 468 1.5E-9 T 12-10-2018 YpsIP31758_0611 cf33d1f4af0891032138e71ad552a7cf 471 Gene3D G3DSA:3.20.20.80 2 322 2.8E-80 T 12-10-2018 YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 8.1E-133 T 12-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 SUPERFAMILY SSF51735 3 250 2.34E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 2.3E-56 T 12-10-2018 YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 Gene3D G3DSA:3.40.50.720 1 251 7.3E-80 T 12-10-2018 YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_0935 f10ce0b79ef08fd4abc1b11f76a211ca 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_4057 23f62f017a266bc385f0e4594aca6a0c 265 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 41 258 3.0E-91 T 12-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 YpsIP31758_4057 23f62f017a266bc385f0e4594aca6a0c 265 SUPERFAMILY SSF54197 41 258 2.65E-87 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_4057 23f62f017a266bc385f0e4594aca6a0c 265 PIRSF PIRSF001273 11 263 4.3E-113 T 12-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 YpsIP31758_4057 23f62f017a266bc385f0e4594aca6a0c 265 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 3 260 40.038 T 12-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 YpsIP31758_4057 23f62f017a266bc385f0e4594aca6a0c 265 Gene3D G3DSA:3.30.428.30 35 259 1.5E-90 T 12-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF01842 ACT domain 5 69 7.1E-15 T 12-10-2018 IPR002912 ACT domain YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.1150 81 158 5.7E-27 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 7.0E-37 T 12-10-2018 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.2E-23 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 3 75 1.04E-21 T 12-10-2018 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 6.4E-66 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.260 1 80 1.2E-34 T 12-10-2018 YpsIP31758_3400 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 80 163 5.8E-25 T 12-10-2018 YpsIP31758_2325 9439cbd881a5cd9699f8e95b3e7d2dea 232 Gene3D G3DSA:2.30.30.760 173 232 8.3E-26 T 12-10-2018 YpsIP31758_2325 9439cbd881a5cd9699f8e95b3e7d2dea 232 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 98 230 3.2E-43 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YpsIP31758_2325 9439cbd881a5cd9699f8e95b3e7d2dea 232 Pfam PF13144 Chaperone for flagella basal body P-ring formation 38 230 1.9E-53 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YpsIP31758_2325 9439cbd881a5cd9699f8e95b3e7d2dea 232 SMART SM00858 108 170 8.1E-14 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 SUPERFAMILY SSF46458 1 142 2.49E-39 T 12-10-2018 IPR009050 Globin-like superfamily YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Gene3D G3DSA:1.10.490.10 1 142 1.7E-51 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 58.111 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 2.2E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 5.5E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 5.5E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 5.5E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 5.5E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 SUPERFAMILY SSF63380 148 253 9.03E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Pfam PF00042 Globin 7 102 2.2E-13 T 12-10-2018 IPR000971 Globin GO:0020037 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Gene3D G3DSA:2.40.30.10 149 254 2.1E-32 T 12-10-2018 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 3.1E-6 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 3.1E-6 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 3.1E-6 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 3.1E-6 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 3.0E-15 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 SUPERFAMILY SSF52343 254 395 7.46E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_1157 b37939d12032e3cf196546a7e936cec8 396 Gene3D G3DSA:3.40.50.80 256 396 1.8E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 Pfam PF13437 HlyD family secretion protein 265 358 1.9E-11 T 12-10-2018 YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 276 297 3.4E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.4E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 3.4E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 ProSitePatterns PS00543 HlyD family secretion proteins signature. 392 414 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YpsIP31758_0106 de858a3085e4acc6d839932fcdd180d3 430 SUPERFAMILY SSF51230 65 106 4.71E-5 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_3097 9a9728256f60215e13ff513e69b65de5 255 SUPERFAMILY SSF111364 26 255 5.75E-33 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 YpsIP31758_3097 9a9728256f60215e13ff513e69b65de5 255 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 255 5.1E-53 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YpsIP31758_0458 b0ecdea66e6b0863f31fe19c42a16941 375 SUPERFAMILY SSF52540 68 210 1.58E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0458 b0ecdea66e6b0863f31fe19c42a16941 375 Pfam PF03969 AFG1-like ATPase 6 370 4.9E-148 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 YpsIP31758_0458 b0ecdea66e6b0863f31fe19c42a16941 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.031 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 YpsIP31758_0458 b0ecdea66e6b0863f31fe19c42a16941 375 Gene3D G3DSA:3.40.50.300 23 197 4.6E-19 T 12-10-2018 YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 SUPERFAMILY SSF50249 9 176 4.97E-43 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 3.5E-244 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Pfam PF00270 DEAD/DEAH box helicase 271 431 5.6E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.4E-16 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 SUPERFAMILY SSF52540 208 453 3.99E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Pfam PF17191 RecG wedge domain 14 172 5.5E-22 T 12-10-2018 IPR033454 RecG, wedge domain YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Gene3D G3DSA:3.40.50.300 457 630 3.8E-50 T 12-10-2018 YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Gene3D G3DSA:2.40.50.140 47 141 6.4E-14 T 12-10-2018 YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 SMART SM00490 505 589 1.5E-21 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 SUPERFAMILY SSF52540 292 653 5.8E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 SMART SM00487 265 459 6.7E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_0037 d777d05cc88f82f4d606886c111fa412 693 Gene3D G3DSA:3.40.50.300 208 450 7.4E-82 T 12-10-2018 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:2.40.50.140 34 101 2.8E-26 T 12-10-2018 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 1.9E-92 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:1.10.40.50 276 349 2.8E-28 T 12-10-2018 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 39 340 37.237 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:3.40.50.300 102 275 2.2E-47 T 12-10-2018 YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 SUPERFAMILY SSF52540 113 340 5.74E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3662 c5f046db7128b2ea4f0c810acf33dc2b 350 Pfam PF03193 RsgA GTPase 99 276 2.4E-54 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SMART SM00981 76 166 2.9E-22 T 12-10-2018 IPR004114 THUMP domain GO:0003723 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Gene3D G3DSA:3.40.50.620 176 396 2.1E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF143437 1 174 8.89E-47 T 12-10-2018 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 1.2E-128 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF52402 175 373 6.17E-42 T 12-10-2018 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 2.9E-79 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Gene3D G3DSA:3.30.2130.30 1 175 1.4E-34 T 12-10-2018 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Gene3D G3DSA:3.40.250.10 397 483 4.4E-10 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 230.324 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 3.9E-43 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF52821 392 482 3.01E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_3108 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Pfam PF02926 THUMP domain 29 162 1.5E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 YpsIP31758_3769 8dae59b4c7c41fbf9690060fea491e91 170 Pfam PF01475 Ferric uptake regulator family 21 139 2.7E-13 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YpsIP31758_3769 8dae59b4c7c41fbf9690060fea491e91 170 SUPERFAMILY SSF46785 13 145 3.46E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3769 8dae59b4c7c41fbf9690060fea491e91 170 Gene3D G3DSA:1.10.10.10 2 90 4.1E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3769 8dae59b4c7c41fbf9690060fea491e91 170 Gene3D G3DSA:3.30.1490.190 91 153 4.6E-15 T 12-10-2018 YpsIP31758_1253 1a24278fc87b49941b2b0ebc1d90e0ef 64 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 6.5E-38 T 12-10-2018 IPR020910 Uncharacterised protein family UPF0370 YpsIP31758_1253 1a24278fc87b49941b2b0ebc1d90e0ef 64 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 28.52 T 12-10-2018 IPR020910 Uncharacterised protein family UPF0370 YpsIP31758_1910 d6626af96d8023d9bcf88d3884e120a3 231 SMART SM01007 7 198 5.0E-65 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_1910 d6626af96d8023d9bcf88d3884e120a3 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.2E-44 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_1910 d6626af96d8023d9bcf88d3884e120a3 231 SUPERFAMILY SSF53639 1 223 9.61E-67 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_1910 d6626af96d8023d9bcf88d3884e120a3 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.3E-124 T 12-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YpsIP31758_1910 d6626af96d8023d9bcf88d3884e120a3 231 Gene3D G3DSA:3.40.225.10 1 231 1.2E-58 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 Gene3D G3DSA:1.10.287.470 94 185 9.8E-87 T 12-10-2018 YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 2.4E-22 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 363 2.0E-59 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 Gene3D G3DSA:2.40.420.20 45 362 9.8E-87 T 12-10-2018 YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 Gene3D G3DSA:2.40.30.170 49 301 9.8E-87 T 12-10-2018 YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 Gene3D G3DSA:2.40.50.100 60 222 9.8E-87 T 12-10-2018 YpsIP31758_2611 b1c895c00b3a6202427e5d2706401b2d 370 SUPERFAMILY SSF111369 52 298 3.14E-29 T 12-10-2018 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 Gene3D G3DSA:3.40.50.970 472 706 2.9E-112 T 12-10-2018 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 450 4.1E-5 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 109 294 2.7E-8 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 SUPERFAMILY SSF52518 474 701 1.3E-99 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 Gene3D G3DSA:3.40.50.970 58 471 9.1E-136 T 12-10-2018 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 Gene3D G3DSA:3.40.50.920 707 887 4.7E-74 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 SUPERFAMILY SSF52922 702 885 2.17E-62 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 SUPERFAMILY SSF52518 59 469 9.09E-144 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3363 4746c3343a1cdf930e84ecb40a23bfc6 887 PIRSF PIRSF000156 1 887 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 Pfam PF00210 Ferritin-like domain 8 143 8.8E-38 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PIRSF PIRSF002560 1 157 1.0E-69 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 SUPERFAMILY SSF47240 1 153 4.67E-52 T 12-10-2018 IPR009078 Ferritin-like superfamily YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 Gene3D G3DSA:1.20.1260.10 1 157 7.4E-70 T 12-10-2018 IPR012347 Ferritin-like YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.6E-79 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 3 22 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 44 64 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 128 149 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 65 85 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 23 43 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 107 127 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_3917 29a305f87b6b0df91a1b3d43daa3ccea 157 PRINTS PR00601 Bacterioferritin signature 86 106 1.2E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YpsIP31758_0997 16359dac08429a62c4cee574ccc55b51 146 SUPERFAMILY SSF82649 3 143 3.24E-45 T 12-10-2018 YpsIP31758_0997 16359dac08429a62c4cee574ccc55b51 146 Pfam PF02657 Fe-S metabolism associated domain 17 137 6.4E-40 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like YpsIP31758_0997 16359dac08429a62c4cee574ccc55b51 146 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 2 140 3.5E-78 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YpsIP31758_0997 16359dac08429a62c4cee574ccc55b51 146 Gene3D G3DSA:3.90.1010.10 1 143 2.0E-49 T 12-10-2018 YpsIP31758_1802 9bd6cce06dffd57749c4b3074c7136f2 313 PIRSF PIRSF004976 2 270 6.4E-76 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 YpsIP31758_1802 9bd6cce06dffd57749c4b3074c7136f2 313 SUPERFAMILY SSF52402 17 236 3.26E-54 T 12-10-2018 YpsIP31758_1802 9bd6cce06dffd57749c4b3074c7136f2 313 Pfam PF01171 PP-loop family 42 203 1.2E-12 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 YpsIP31758_1802 9bd6cce06dffd57749c4b3074c7136f2 313 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 10 271 57.377 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 YpsIP31758_1802 9bd6cce06dffd57749c4b3074c7136f2 313 Gene3D G3DSA:3.40.50.620 3 267 2.1E-46 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 Gene3D G3DSA:3.20.20.140 55 344 3.5E-136 T 12-10-2018 YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 SUPERFAMILY SSF51556 54 350 2.77E-100 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 SUPERFAMILY SSF51338 1 53 2.09E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 PIRSF PIRSF038994 1 381 5.4E-116 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 Gene3D G3DSA:2.30.40.10 7 376 3.5E-136 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 Pfam PF01979 Amidohydrolase family 50 379 1.6E-41 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_2910 5c2e1e98f0644ac438a36cacc409537a 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.1E-163 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 8.3E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 8.3E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 8.3E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 8.3E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 8.3E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 Gene3D G3DSA:3.40.50.1370 150 319 1.2E-138 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 4.5E-47 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 SUPERFAMILY SSF53671 1 333 3.8E-100 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 4.3E-54 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.867 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.1E-134 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 Gene3D G3DSA:3.40.50.1370 6 329 1.2E-138 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 6.8E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 6.8E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 6.8E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_3549 e60060066675fc6879f8fe6bccb2cdc9 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 6.8E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YpsIP31758_0905 2cfd51b0d5bb086c3cc26cb238e82699 226 SUPERFAMILY SSF46785 63 184 8.0E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0905 2cfd51b0d5bb086c3cc26cb238e82699 226 Pfam PF03551 Transcriptional regulator PadR-like family 68 137 4.4E-19 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal YpsIP31758_0905 2cfd51b0d5bb086c3cc26cb238e82699 226 Gene3D G3DSA:1.10.10.10 49 162 4.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Gene3D G3DSA:1.50.10.100 233 621 2.8E-109 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 SUPERFAMILY SSF49863 902 1023 4.32E-41 T 12-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 SUPERFAMILY SSF49785 21 231 2.13E-82 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 SUPERFAMILY SSF74650 622 896 1.05E-84 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Pfam PF09093 Lyase, catalytic 244 606 9.1E-134 T 12-10-2018 IPR015177 Lyase, catalytic YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 903 964 7.5E-5 T 12-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 628 880 5.2E-33 T 12-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Gene3D G3DSA:2.60.120.430 20 232 2.2E-64 T 12-10-2018 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Gene3D G3DSA:2.60.220.10 902 1024 7.4E-38 T 12-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 PIRSF PIRSF034515 1 1024 0.0 T 12-10-2018 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 SUPERFAMILY SSF48230 234 620 6.11E-154 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Gene3D G3DSA:2.70.98.10 622 900 1.9E-98 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 YpsIP31758_0946 0d81754177b32fcdbb3bf248231ba735 1024 Pfam PF09092 Lyase, N terminal 34 229 1.2E-59 T 12-10-2018 IPR015176 Lyase, N-terminal YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PIRSF PIRSF000535 2 311 3.1E-114 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Gene3D G3DSA:3.40.1190.20 2 310 2.7E-90 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 9.3E-100 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 SUPERFAMILY SSF53613 7 306 8.89E-66 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.8E-98 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YpsIP31758_2682 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 4.0E-62 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_0979 c1d1882fe799214596cdfb72a59c4e5e 346 Gene3D G3DSA:3.20.20.100 1 346 1.8E-139 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_0979 c1d1882fe799214596cdfb72a59c4e5e 346 SUPERFAMILY SSF51430 1 344 6.29E-108 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_0979 c1d1882fe799214596cdfb72a59c4e5e 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.3E-74 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 7 29 1.2E-38 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 1.2E-38 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 1.2E-38 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 1.2E-38 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 1.2E-38 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 SUPERFAMILY SSF160544 239 345 1.02E-31 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 341 5.1E-104 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 5 343 3.3E-117 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 YpsIP31758_3811 584d724f4cb136bcd920a8bf9aa11f4b 356 Gene3D G3DSA:3.40.1690.10 212 352 5.7E-50 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_3183 269dde239a6135adc7eea59423bc6ad3 386 SUPERFAMILY SSF53383 9 385 1.46E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3183 269dde239a6135adc7eea59423bc6ad3 386 Pfam PF00155 Aminotransferase class I and II 32 383 3.7E-61 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_3183 269dde239a6135adc7eea59423bc6ad3 386 Gene3D G3DSA:3.90.1150.10 20 383 2.8E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3183 269dde239a6135adc7eea59423bc6ad3 386 Gene3D G3DSA:3.40.640.10 45 284 2.8E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3103 a7b80564342486ca4515e95bd5df8a47 454 Pfam PF07690 Major Facilitator Superfamily 20 346 1.1E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3103 a7b80564342486ca4515e95bd5df8a47 454 Gene3D G3DSA:3.30.70.100 390 454 1.4E-27 T 12-10-2018 YpsIP31758_3103 a7b80564342486ca4515e95bd5df8a47 454 SUPERFAMILY SSF103473 1 390 4.05E-62 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3103 a7b80564342486ca4515e95bd5df8a47 454 Gene3D G3DSA:1.20.1250.20 3 389 3.1E-100 T 12-10-2018 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 SMART SM00448 2 111 7.7E-47 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 SUPERFAMILY SSF52172 1 188 6.55E-42 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:3.40.50.2300 1 129 3.6E-42 T 12-10-2018 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 SMART SM00862 152 228 2.6E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.1E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0084 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:1.10.10.10 130 232 9.7E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1427 968cf8e4153a4923bc268c6401208cc7 190 SUPERFAMILY SSF52507 2 187 4.71E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YpsIP31758_1427 968cf8e4153a4923bc268c6401208cc7 190 Pfam PF02441 Flavoprotein 2 165 5.8E-25 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 YpsIP31758_1427 968cf8e4153a4923bc268c6401208cc7 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.467 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like YpsIP31758_1427 968cf8e4153a4923bc268c6401208cc7 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 1.3E-71 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like YpsIP31758_1427 968cf8e4153a4923bc268c6401208cc7 190 Gene3D G3DSA:3.40.50.1950 2 190 1.1E-77 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 Pfam PF00005 ABC transporter 35 184 2.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 Pfam PF00005 ABC transporter 286 439 3.6E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 SUPERFAMILY SSF52540 18 240 1.63E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 SUPERFAMILY SSF52540 283 497 4.74E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 Gene3D G3DSA:3.40.50.300 277 520 7.0E-42 T 12-10-2018 YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 Gene3D G3DSA:3.40.50.300 4 255 7.4E-60 T 12-10-2018 YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 SMART SM00382 44 232 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 SMART SM00382 293 488 4.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1884 356973531c9684701f7aca4cf085e6c6 523 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 1.5E-103 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 4.6E-165 T 12-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 35 280 8.5E-89 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 Gene3D G3DSA:3.40.50.1580 1 287 2.0E-114 T 12-10-2018 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 Pfam PF01048 Phosphorylase superfamily 36 282 1.9E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 PIRSF PIRSF000477 7 284 1.6E-111 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 YpsIP31758_2824 ccf408a5e590a0f4e672fa78c72c9a92 287 SUPERFAMILY SSF53167 20 283 1.57E-81 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF52777 177 406 9.34E-90 T 12-10-2018 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF47005 107 151 5.49E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 5.0E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 1.0E-189 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Pfam PF02817 e3 binding domain 114 146 1.5E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00364 Biotin-requiring enzyme 5 77 2.6E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:3.30.559.10 175 407 5.3E-98 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF51230 2 93 1.57E-24 T 12-10-2018 IPR011053 Single hybrid motif YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:2.40.50.100 2 79 1.1E-23 T 12-10-2018 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YpsIP31758_2880 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:4.10.320.10 103 152 3.8E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 YpsIP31758_A0063 929ebc54007f0336b8cd7ddf8b17b576 510 Gene3D G3DSA:3.40.50.300 205 482 4.8E-71 T 12-10-2018 YpsIP31758_A0063 929ebc54007f0336b8cd7ddf8b17b576 510 Pfam PF00437 Type II/IV secretion system protein 100 371 1.6E-35 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_A0063 929ebc54007f0336b8cd7ddf8b17b576 510 SUPERFAMILY SSF52540 86 476 4.25E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0063 929ebc54007f0336b8cd7ddf8b17b576 510 Gene3D G3DSA:3.30.450.90 64 152 8.9E-6 T 12-10-2018 YpsIP31758_1058 5bd36345732a24a649c39a676ca7cf0f 316 Pfam PF01522 Polysaccharide deacetylase 81 167 5.6E-8 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 YpsIP31758_1058 5bd36345732a24a649c39a676ca7cf0f 316 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 10 309 9.1E-155 T 12-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 YpsIP31758_1058 5bd36345732a24a649c39a676ca7cf0f 316 Gene3D G3DSA:3.20.20.370 2 314 2.5E-99 T 12-10-2018 YpsIP31758_1058 5bd36345732a24a649c39a676ca7cf0f 316 SUPERFAMILY SSF88713 9 310 3.06E-85 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_3197 dabba7abe4b79a1ea35d5e71528e2327 399 Pfam PF07690 Major Facilitator Superfamily 19 276 9.3E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3197 dabba7abe4b79a1ea35d5e71528e2327 399 SUPERFAMILY SSF103473 9 390 2.35E-55 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3197 dabba7abe4b79a1ea35d5e71528e2327 399 Gene3D G3DSA:1.20.1250.20 10 386 2.2E-46 T 12-10-2018 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 SMART SM00283 293 540 1.2E-88 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 318 340 - T 12-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 Gene3D G3DSA:1.10.287.950 240 542 1.4E-89 T 12-10-2018 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 1.2E-60 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 55 1.2E-60 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.2E-60 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 1.2E-60 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.2E-60 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 Pfam PF02203 Tar ligand binding domain homologue 27 192 1.4E-27 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 Gene3D G3DSA:1.20.120.30 49 214 2.0E-5 T 12-10-2018 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 SUPERFAMILY SSF47170 55 180 1.01E-13 T 12-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 SMART SM00304 240 292 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 Pfam PF00672 HAMP domain 242 287 2.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 SUPERFAMILY SSF58104 260 541 4.32E-70 T 12-10-2018 YpsIP31758_1631 fa85f4fa98b3261281507a0da7d173cf 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 508 9.9E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_0491 ef4e497b385551a2704cf5018066c8d3 469 SUPERFAMILY SSF51556 3 465 4.76E-179 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_0491 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:1.10.2020.10 46 137 9.0E-200 T 12-10-2018 YpsIP31758_0491 ef4e497b385551a2704cf5018066c8d3 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 48.974 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 YpsIP31758_0491 ef4e497b385551a2704cf5018066c8d3 469 Pfam PF02614 Glucuronate isomerase 1 465 1.2E-226 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 YpsIP31758_0491 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:3.20.20.140 7 465 9.0E-200 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 PIRSF PIRSF000185 22 447 8.8E-114 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF53223 6 196 5.12E-74 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.3E-85 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.50.720 209 373 1.7E-173 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 401 447 1.1E-10 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 14 374 1.7E-173 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF51735 202 446 5.09E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 4.6E-51 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.50.10860 55 190 1.7E-173 T 12-10-2018 YpsIP31758_4036 8071908ddfd9824af202c5fca1776d5d 447 SMART SM00839 204 445 6.6E-91 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YpsIP31758_0803 f5b8f159f2fa4d15f91984c78f716a4b 149 Pfam PF04965 Gene 25-like lysozyme 35 116 5.6E-10 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_0803 f5b8f159f2fa4d15f91984c78f716a4b 149 SUPERFAMILY SSF160719 32 120 1.26E-17 T 12-10-2018 YpsIP31758_0803 f5b8f159f2fa4d15f91984c78f716a4b 149 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 1.0E-23 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 SUPERFAMILY SSF47226 773 866 5.5E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 SUPERFAMILY SSF55874 479 648 5.5E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 1 867 25.722 T 12-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Gene3D G3DSA:1.20.120.160 770 870 7.3E-10 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Pfam PF16359 RcsD-ABL domain 659 758 7.1E-38 T 12-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Gene3D G3DSA:3.30.565.10 488 646 9.5E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Gene3D G3DSA:1.10.287.130 436 487 9.5E-23 T 12-10-2018 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Gene3D G3DSA:3.40.50.11620 658 769 6.6E-41 T 12-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 590 3.1E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 3.1E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 3.1E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 SMART SM00387 537 650 2.4E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 537 646 5.4E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2763 c1b12c2be283222dab5294da06b8e96b 872 Pfam PF01627 Hpt domain 787 846 8.2E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 3.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 3.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 312 329 3.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 3.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 3.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 Pfam PF00267 Gram-negative porin 28 360 2.6E-141 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 Gene3D G3DSA:2.40.160.10 23 360 2.9E-147 T 12-10-2018 IPR023614 Porin domain superfamily YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 312 328 - T 12-10-2018 IPR013793 Porin, Gram-negative type, conserved site YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 SUPERFAMILY SSF56935 23 360 4.58E-82 T 12-10-2018 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 267 286 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2559 21f9265934a34fe7120cc3e2b855d227 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 1.9E-69 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 SUPERFAMILY SSF54843 1 109 1.57E-42 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.807 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.3E-38 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3910 f8dac1c557d023b0b5dfdfbd193dce1b 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-46 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_0996 5e81801f9a24efe6c647033af8a951bf 275 SUPERFAMILY SSF69572 6 259 6.54E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 YpsIP31758_0996 5e81801f9a24efe6c647033af8a951bf 275 Gene3D G3DSA:3.40.50.720 1 274 9.3E-113 T 12-10-2018 YpsIP31758_0996 5e81801f9a24efe6c647033af8a951bf 275 Pfam PF00899 ThiF family 24 262 9.5E-39 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 SMART SM00642 247 596 8.8E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Gene3D G3DSA:2.60.40.1180 623 727 5.0E-38 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 3.8E-25 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 SUPERFAMILY SSF51445 233 620 5.07E-114 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 1.6E-300 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 PIRSF PIRSF000463 6 727 2.7E-286 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 SUPERFAMILY SSF81296 117 223 3.15E-36 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 SUPERFAMILY SSF51011 623 726 8.51E-34 T 12-10-2018 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Pfam PF00128 Alpha amylase, catalytic domain 273 347 6.6E-10 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.907 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 SUPERFAMILY SSF81296 16 115 7.35E-17 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Gene3D G3DSA:2.60.40.10 3 221 2.8E-78 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Gene3D G3DSA:3.20.20.80 231 612 1.7E-173 T 12-10-2018 YpsIP31758_4006 32696736da75846fb826340dae6a271f 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 2.2E-20 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 Gene3D G3DSA:3.90.79.10 126 256 5.1E-38 T 12-10-2018 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.4E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 45.192 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 SUPERFAMILY SSF55811 79 241 2.94E-38 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 Gene3D G3DSA:3.90.79.20 2 125 1.2E-47 T 12-10-2018 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 Pfam PF00293 NUDIX domain 131 234 1.4E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_3851 3876e96a5df4d5f3188a6c6975a29ec0 260 SUPERFAMILY SSF55811 2 96 4.87E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 Pfam PF04055 Radical SAM superfamily 57 226 3.1E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 PIRSF PIRSF000167 4 454 6.5E-174 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 Gene3D G3DSA:1.10.10.920 364 457 2.3E-36 T 12-10-2018 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 SUPERFAMILY SSF102114 6 444 7.98E-146 T 12-10-2018 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 Pfam PF06969 HemN C-terminal domain 364 431 1.6E-11 T 12-10-2018 IPR010723 HemN, C-terminal YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 Gene3D G3DSA:3.80.30.20 1 363 2.8E-138 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 SMART SM00729 52 272 3.7E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_0024 81b28954565799b38ad25cc3f949d446 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 7.6E-219 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 YpsIP31758_0779 685920d85e150dbad53ad785fb07efc6 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 1.4E-136 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_0779 685920d85e150dbad53ad785fb07efc6 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 4.4E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_1611 d77ce8c2a30afceac3c53d8bab2f3371 208 SUPERFAMILY SSF101322 2 207 2.88E-82 T 12-10-2018 IPR035932 HflD-like superfamily YpsIP31758_1611 d77ce8c2a30afceac3c53d8bab2f3371 208 Gene3D G3DSA:1.10.3890.10 1 208 4.9E-80 T 12-10-2018 IPR035932 HflD-like superfamily YpsIP31758_1611 d77ce8c2a30afceac3c53d8bab2f3371 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.962 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD YpsIP31758_1611 d77ce8c2a30afceac3c53d8bab2f3371 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 4.0E-105 T 12-10-2018 YpsIP31758_1611 d77ce8c2a30afceac3c53d8bab2f3371 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 2.1E-77 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 PIRSF PIRSF000977 2 476 1.4E-206 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 Gene3D G3DSA:1.20.1280.70 360 420 9.1E-28 T 12-10-2018 YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 SUPERFAMILY SSF53098 8 474 3.16E-135 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 Pfam PF08411 Exonuclease C-terminal 211 472 5.5E-110 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 Pfam PF00929 Exonuclease 12 191 2.8E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 Gene3D G3DSA:3.30.420.10 1 200 7.9E-71 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_2420 ca29a1a68b7f6dfead4c440418d2b857 476 Gene3D G3DSA:2.30.30.450 213 353 3.7E-59 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.048 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.9E-51 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 Pfam PF01196 Ribosomal protein L17 20 116 9.9E-35 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 Gene3D G3DSA:3.90.1030.10 1 117 2.6E-48 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3889 eed5df6fad418a9d43e3b4c061d41cae 129 SUPERFAMILY SSF64263 1 118 3.92E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0123 43db8edda69e661af5c26b3d5b5e09e0 294 Gene3D G3DSA:3.20.20.220 1 294 1.9E-117 T 12-10-2018 YpsIP31758_0123 43db8edda69e661af5c26b3d5b5e09e0 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.0E-103 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 YpsIP31758_0123 43db8edda69e661af5c26b3d5b5e09e0 294 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 8.0E-109 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 YpsIP31758_0123 43db8edda69e661af5c26b3d5b5e09e0 294 SUPERFAMILY SSF51730 22 293 4.71E-96 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 Gene3D G3DSA:3.90.79.10 1 132 1.3E-37 T 12-10-2018 YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 SUPERFAMILY SSF55811 4 139 3.25E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.6E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.6E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_2686 2fd18ec3c91746bad77d3edd65251140 151 Pfam PF00293 NUDIX domain 5 126 8.6E-28 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 PIRSF PIRSF001563 5 434 3.6E-110 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF08245 Mur ligase middle domain 54 196 6.9E-9 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 357 1.4E-6 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53623 13 296 3.48E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53244 298 431 2.14E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 430 1.5E-103 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.90.190.20 300 434 5.5E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_1423 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.40.1190.10 1 299 5.2E-103 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Pfam PF00128 Alpha amylase, catalytic domain 186 291 1.3E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Gene3D G3DSA:2.60.40.10 2 133 9.2E-44 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Gene3D G3DSA:2.60.40.1180 575 660 8.0E-35 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 SUPERFAMILY SSF51011 576 629 2.09E-5 T 12-10-2018 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 13 95 1.1E-17 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 SUPERFAMILY SSF51445 131 567 5.93E-122 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Gene3D G3DSA:3.20.20.80 134 574 9.6E-171 T 12-10-2018 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 SUPERFAMILY SSF81296 7 144 8.68E-42 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 638 3.1E-269 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 3 660 73.14 T 12-10-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 YpsIP31758_4005 0b2f6c62ac86481fe1e317a9321ef93b 662 SMART SM00642 151 560 4.1E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 Gene3D G3DSA:3.90.550.10 2 347 9.5E-120 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 SUPERFAMILY SSF51182 183 465 6.61E-80 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 Gene3D G3DSA:2.60.120.10 355 462 6.2E-17 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 Pfam PF01050 Mannose-6-phosphate isomerase 313 463 9.9E-61 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 SUPERFAMILY SSF53448 2 280 6.57E-71 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 463 8.4E-231 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YpsIP31758_3039 f1f1f42ad3d243ed9b780bcd1a49bf85 468 Pfam PF00483 Nucleotidyl transferase 4 284 3.4E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_0140 01af90948fa499a2c8fcf342512c2767 135 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 115 4.0E-50 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 YpsIP31758_0140 01af90948fa499a2c8fcf342512c2767 135 Pfam PF07226 Protein of unknown function (DUF1422) 4 115 3.7E-51 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 YpsIP31758_1511 f376752b6a692701924850681399598d 313 Gene3D G3DSA:3.40.190.10 166 266 4.0E-56 T 12-10-2018 YpsIP31758_1511 f376752b6a692701924850681399598d 313 Pfam PF03466 LysR substrate binding domain 90 294 2.8E-34 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1511 f376752b6a692701924850681399598d 313 SUPERFAMILY SSF46785 8 114 4.99E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1511 f376752b6a692701924850681399598d 313 Gene3D G3DSA:1.10.10.10 6 94 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1511 f376752b6a692701924850681399598d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1511 f376752b6a692701924850681399598d 313 Gene3D G3DSA:3.40.190.10 95 291 4.0E-56 T 12-10-2018 YpsIP31758_1511 f376752b6a692701924850681399598d 313 SUPERFAMILY SSF53850 91 298 1.79E-38 T 12-10-2018 YpsIP31758_2953 565559992bb320543a67f2f490ad5769 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 7.1E-31 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 YpsIP31758_2953 565559992bb320543a67f2f490ad5769 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.956 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 YpsIP31758_2953 565559992bb320543a67f2f490ad5769 87 SUPERFAMILY SSF117991 1 87 3.92E-32 T 12-10-2018 IPR027471 YbeD-like domain superfamily YpsIP31758_2953 565559992bb320543a67f2f490ad5769 87 Gene3D G3DSA:3.30.70.260 1 87 1.3E-35 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:1.20.120.1320 52 146 2.7E-73 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF55347 609 792 2.62E-47 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.30.360.10 620 790 2.1E-104 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.30.70.260 376 389 3.4E-5 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.1160.10 16 299 2.7E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 PIRSF PIRSF000727 13 811 1.1E-290 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.50.720 461 807 2.1E-104 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Pfam PF00742 Homoserine dehydrogenase 609 804 2.0E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.30.70.260 390 453 3.4E-5 T 12-10-2018 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF51735 458 631 9.0E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF53633 13 300 6.04E-59 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 2.6E-21 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 6.8E-63 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_0122 f544590c926fa0f10f68e391065b814d 811 Pfam PF00696 Amino acid kinase family 13 285 1.3E-42 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PIRSF PIRSF000962 1 344 3.1E-130 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 250 261 4.6E-29 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 295 306 4.6E-29 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 114 132 4.6E-29 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 269 282 4.6E-29 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 141 162 4.6E-29 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 SUPERFAMILY SSF56281 42 320 3.93E-20 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 Pfam PF02112 cAMP phosphodiesterases class-II 41 339 4.3E-53 T 12-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 118 132 - T 12-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 YpsIP31758_1113 f11d323839a5cc7da97edca5d14ef8eb 345 Gene3D G3DSA:3.60.15.10 41 333 9.6E-17 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_1066 2dada48bf02ead2de30711120aef4765 121 Pfam PF06392 Acid shock protein repeat 47 67 3.9E-6 T 12-10-2018 IPR009435 Acid shock GO:0010447|GO:0042597 YpsIP31758_1066 2dada48bf02ead2de30711120aef4765 121 Hamap MF_00546 Acid shock protein [asr]. 1 121 18.537 T 12-10-2018 IPR023497 Acid shock protein YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:1.20.1640.10 508 1010 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.2090.10 179 271 1.0E-249 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.9E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.9E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.9E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.9E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 136 326 9.77E-23 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1430 559 657 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82714 722 792 1.14E-8 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:1.20.1640.10 13 507 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 559 632 8.89E-6 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82714 184 268 3.66E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1320 136 328 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.2090.10 709 799 1.0E-249 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82866 795 1014 1.29E-45 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1430 40 807 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1011 9.8E-162 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82693 40 135 3.79E-19 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 Gene3D G3DSA:3.30.70.1440 658 859 1.0E-249 T 12-10-2018 YpsIP31758_3512 c00461c79972b0f26f4587871b468130 1028 SUPERFAMILY SSF82866 293 489 1.83E-36 T 12-10-2018 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 SUPERFAMILY SSF50182 920 985 1.08E-16 T 12-10-2018 IPR010920 LSM domain superfamily YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 Gene3D G3DSA:3.30.70.100 988 1081 3.2E-20 T 12-10-2018 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 SUPERFAMILY SSF82689 987 1087 3.92E-26 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 Pfam PF00924 Mechanosensitive ion channel 877 1076 2.7E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 949 983 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 Gene3D G3DSA:2.30.30.60 935 984 4.8E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 40 278 8.2E-62 T 12-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 498 816 5.5E-100 T 12-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YpsIP31758_3064 29b2c0ff1008d22c01eb1ed653487b20 1120 SUPERFAMILY SSF82861 835 918 1.7E-8 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.3E-242 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 PIRSF PIRSF000171 1 580 1.9E-46 T 12-10-2018 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Pfam PF00890 FAD binding domain 9 405 4.0E-117 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:1.20.58.100 431 547 1.6E-39 T 12-10-2018 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-34 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF46977 452 588 9.29E-45 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:4.10.80.40 548 588 8.2E-25 T 12-10-2018 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.90.700.10 246 350 8.9E-172 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 12-10-2018 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 12-10-2018 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF51905 5 438 1.87E-77 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 5.8E-276 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YpsIP31758_2883 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.50.50.60 9 416 8.9E-172 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 6.4E-35 T 12-10-2018 IPR012997 Rare lipoprotein A YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:3.30.70.1070 287 359 3.0E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF110997 286 357 4.58E-15 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 Pfam PF05036 Sporulation related domain 286 357 1.4E-15 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 Pfam PF03330 Lytic transglycolase 78 164 1.3E-23 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 3 166 22.941 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF50685 75 164 4.19E-9 T 12-10-2018 IPR036908 RlpA-like domain superfamily YpsIP31758_2951 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:2.40.40.10 76 167 2.9E-32 T 12-10-2018 IPR036908 RlpA-like domain superfamily YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 SMART SM00382 29 212 3.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:2.40.50.140 285 339 6.9E-26 T 12-10-2018 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 Pfam PF00005 ABC transporter 21 162 1.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 Pfam PF08402 TOBE domain 278 347 6.4E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 SUPERFAMILY SSF50331 237 355 4.62E-26 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:2.40.50.940 223 348 6.9E-26 T 12-10-2018 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 Gene3D G3DSA:3.40.50.300 3 222 6.7E-63 T 12-10-2018 YpsIP31758_0259 dbda8da001dde3cc7832626d1efc57c4 357 SUPERFAMILY SSF52540 4 243 1.57E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3028 2bc4b50b76d8948743d35013b9180ef6 269 Pfam PF01963 TraB family 31 267 3.2E-39 T 12-10-2018 IPR002816 Pheromone shutdown, TraB YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 Pfam PF14378 PAP2 superfamily 78 200 1.1E-8 T 12-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 Pfam PF00782 Dual specificity phosphatase, catalytic domain 346 431 2.5E-14 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 SUPERFAMILY SSF52799 285 436 1.36E-22 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 Gene3D G3DSA:3.90.190.10 303 436 6.8E-20 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 SMART SM00404 337 428 0.0077 T 12-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic YpsIP31758_3002 f99a06409813b9c3c99dfa5e514c2d6c 439 SMART SM00195 302 433 8.4E-8 T 12-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF01966 HD domain 229 310 3.2E-13 T 12-10-2018 IPR006674 HD domain YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Gene3D G3DSA:3.30.460.10 1 121 9.0E-27 T 12-10-2018 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 SMART SM00471 224 359 5.6E-4 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 SUPERFAMILY SSF81301 1 119 1.09E-29 T 12-10-2018 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 SUPERFAMILY SSF81891 120 409 4.84E-58 T 12-10-2018 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 6.7E-16 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.604 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.042 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Gene3D G3DSA:1.10.3090.10 122 409 1.9E-45 T 12-10-2018 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 PIRSF PIRSF000813 1 408 1.8E-200 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YpsIP31758_0560 35c1d9b0e146d2f09661aca222d01f4a 412 Pfam PF01743 Poly A polymerase head domain 3 122 7.1E-17 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 SUPERFAMILY SSF53927 4 146 2.3E-47 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 Gene3D G3DSA:3.40.430.10 137 368 1.9E-74 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.5E-19 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 SUPERFAMILY SSF53597 145 363 8.83E-59 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 PIRSF PIRSF006769 1 368 3.3E-127 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 3.0E-141 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 Gene3D G3DSA:3.40.140.10 1 136 7.7E-45 T 12-10-2018 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 1.8E-70 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 YpsIP31758_3117 4d778cc609e2e8fcdfa8abd3192767ae 369 Pfam PF01872 RibD C-terminal domain 148 360 2.6E-57 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 YpsIP31758_2053 ab978e509b3480bebb13bdffe429d1ea 245 Pfam PF02811 PHP domain 5 80 9.9E-7 T 12-10-2018 IPR004013 PHP domain GO:0003824 YpsIP31758_2053 ab978e509b3480bebb13bdffe429d1ea 245 Gene3D G3DSA:3.20.20.140 1 245 7.8E-65 T 12-10-2018 YpsIP31758_2053 ab978e509b3480bebb13bdffe429d1ea 245 SMART SM00481 4 78 1.4E-15 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal YpsIP31758_2053 ab978e509b3480bebb13bdffe429d1ea 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.351 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 YpsIP31758_2053 ab978e509b3480bebb13bdffe429d1ea 245 SUPERFAMILY SSF89550 3 241 7.98E-62 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YpsIP31758_A0046 32e4dd42475b81c10b148e3eb4cd820e 122 Gene3D G3DSA:1.10.10.2690 74 121 2.8E-6 T 12-10-2018 YpsIP31758_A0046 32e4dd42475b81c10b148e3eb4cd820e 122 Pfam PF01381 Helix-turn-helix 12 62 9.3E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_A0046 32e4dd42475b81c10b148e3eb4cd820e 122 SMART SM00530 9 64 1.2E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_A0046 32e4dd42475b81c10b148e3eb4cd820e 122 SUPERFAMILY SSF47413 5 70 1.64E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_A0046 32e4dd42475b81c10b148e3eb4cd820e 122 Gene3D G3DSA:1.10.260.40 5 73 1.6E-12 T 12-10-2018 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Gene3D G3DSA:2.60.40.3110 257 319 1.1E-20 T 12-10-2018 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 SUPERFAMILY SSF141729 30 139 2.09E-15 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Pfam PF00577 Outer membrane usher protein 177 704 1.8E-67 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Pfam PF13954 PapC N-terminal domain 33 159 9.5E-14 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 284 294 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Gene3D G3DSA:3.10.20.410 30 140 5.2E-5 T 12-10-2018 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Pfam PF13953 PapC C-terminal domain 713 776 5.2E-12 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Gene3D G3DSA:2.60.40.2610 620 708 1.4E-14 T 12-10-2018 YpsIP31758_3782 318998c277d57c7b6d2f40d0806ac326 792 Gene3D G3DSA:2.60.40.2070 714 784 6.4E-6 T 12-10-2018 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 1.1E-141 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 SMART SM00865 206 324 8.3E-56 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.05 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 SMART SM00864 12 204 6.1E-112 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF52490 12 207 1.44E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 2.0E-41 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 5.7E-37 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal YpsIP31758_3382 a732df4bef33207a740f6e7c04080b78 383 Gene3D G3DSA:3.40.50.1440 9 316 1.9E-116 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 SUPERFAMILY SSF100950 76 235 1.57E-24 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 SMART SM01134 75 236 4.0E-63 T 12-10-2018 YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 6.9E-11 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.2E-47 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_2653 232a916130d0ffa02510ea202116d3c6 254 SMART SM00420 8 57 6.2E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 Pfam PF07715 TonB-dependent Receptor Plug Domain 103 196 5.2E-9 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 Gene3D G3DSA:2.40.170.20 216 763 2.2E-68 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 Pfam PF00593 TonB dependent receptor 279 761 3.0E-27 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 746 763 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 Gene3D G3DSA:2.170.130.10 99 215 3.7E-16 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 69 - T 12-10-2018 IPR010916 TonB box, conserved site YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 SUPERFAMILY SSF56935 55 763 5.23E-88 T 12-10-2018 YpsIP31758_2373 2c733813e47279888bd3133cd3a8b530 763 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 105 763 2.1E-153 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 YpsIP31758_2041 a3a02630da9bb987339ce9861dfaac31 191 SUPERFAMILY SSF54593 4 180 2.02E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_2041 a3a02630da9bb987339ce9861dfaac31 191 Gene3D G3DSA:3.10.180.10 2 185 1.5E-67 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_2041 a3a02630da9bb987339ce9861dfaac31 191 Pfam PF06185 YecM protein 10 180 2.9E-69 T 12-10-2018 IPR010393 Protein of unknown function DUF991 YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 Gene3D G3DSA:3.30.70.20 99 166 3.7E-10 T 12-10-2018 YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 Pfam PF13187 4Fe-4S dicluster domain 39 84 1.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 27 164 23.345 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 4.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 SUPERFAMILY SSF54862 33 161 6.91E-20 T 12-10-2018 YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 1.1E-46 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 YpsIP31758_1271 3c03ff1a8a29407ae5654afd5049cab3 167 Gene3D G3DSA:3.30.70.20 37 87 7.3E-7 T 12-10-2018 YpsIP31758_1089 9f3b2f6fc051ad54f9fab5b179b25b5d 120 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 1 120 18.08 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_1089 9f3b2f6fc051ad54f9fab5b179b25b5d 120 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 1 115 2.0E-20 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_1089 9f3b2f6fc051ad54f9fab5b179b25b5d 120 TIGRFAM TIGR00494 crcB: protein CrcB 1 119 1.9E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 SUPERFAMILY SSF69255 466 553 6.02E-34 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 Gene3D G3DSA:3.55.50.10 202 293 2.0E-93 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 SUPERFAMILY SSF69279 115 289 5.1E-56 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 SUPERFAMILY SSF69349 544 732 1.88E-41 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 SUPERFAMILY SSF69279 293 467 8.16E-42 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 126 605 6.3E-192 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 Gene3D G3DSA:3.30.1920.30 325 388 2.0E-93 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 Gene3D G3DSA:2.40.50.230 459 559 2.2E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 Gene3D G3DSA:2.30.110.50 126 431 2.0E-93 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 Pfam PF05954 Phage late control gene D protein (GPD) 134 431 6.8E-83 T 12-10-2018 YpsIP31758_0328 92a0032536b7cc5b67263e05150c86fe 740 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 114 622 9.5E-202 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 SUPERFAMILY SSF50249 5 76 2.53E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 9.2E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.0E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.0E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.0E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 23.732 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 1.0E-35 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 Pfam PF00366 Ribosomal protein S17 10 76 3.5E-33 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3906 afac1fbea05ae6d490da8bcb46982638 88 Gene3D G3DSA:2.40.50.140 1 80 2.8E-37 T 12-10-2018 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SUPERFAMILY SSF49373 792 878 5.49E-12 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SUPERFAMILY SSF49373 889 979 1.65E-23 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SUPERFAMILY SSF49373 693 781 1.41E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.60.40.1080 896 979 1.8E-17 T 12-10-2018 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SUPERFAMILY SSF49373 461 576 3.14E-10 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.60.40.10 686 780 9.0E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.60.40.10 580 677 9.0E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.60.40.10 781 880 3.0E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Pfam PF11924 Inverse autotransporter, beta-domain 77 351 1.3E-100 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SUPERFAMILY SSF49373 588 679 9.81E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.40.160.160 114 358 1.9E-100 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Pfam PF09134 Invasin, domain 3 461 580 5.6E-18 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Gene3D G3DSA:2.60.40.10 458 579 2.9E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 PRINTS PR01369 Intimin signature 299 318 2.6E-10 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 PRINTS PR01369 Intimin signature 203 218 2.6E-10 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 PRINTS PR01369 Intimin signature 386 398 2.6E-10 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 PRINTS PR01369 Intimin signature 231 250 2.6E-10 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Pfam PF02369 Bacterial Ig-like domain (group 1) 585 673 5.3E-13 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 Pfam PF02369 Bacterial Ig-like domain (group 1) 697 775 2.0E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SMART SM00634 691 777 4.8E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SMART SM00634 582 674 2.0E-12 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_2416 a140657372aa6ce844aec8b17812bf07 1075 SMART SM00634 783 878 5.0E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 Pfam PF01311 Bacterial export proteins, family 1 9 243 1.0E-52 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 248 3.1E-72 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 6.1E-28 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 6.1E-28 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 6.1E-28 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_3812 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 6.1E-28 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-150 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Pfam PF01926 50S ribosome-binding GTPase 200 318 8.2E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 SUPERFAMILY SSF54980 366 422 5.83E-14 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.9E-30 T 12-10-2018 IPR025121 GTPase HflX, N-terminal YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 SUPERFAMILY SSF52540 197 375 2.14E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Gene3D G3DSA:3.40.50.11060 17 138 1.3E-36 T 12-10-2018 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.167 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 Gene3D G3DSA:3.40.50.300 197 365 2.9E-37 T 12-10-2018 YpsIP31758_3652 998a311a35c438d8fbcfcabe4837c822 428 PIRSF PIRSF006809 3 422 5.3E-146 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 SUPERFAMILY SSF55031 212 322 2.72E-33 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 Pfam PF01546 Peptidase family M20/M25/M40 143 400 2.0E-10 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 SUPERFAMILY SSF53187 7 407 2.25E-72 T 12-10-2018 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 Pfam PF07687 Peptidase dimerisation domain 209 309 1.8E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 398 9.0E-102 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 Gene3D G3DSA:3.30.70.360 212 322 5.6E-137 T 12-10-2018 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 Gene3D G3DSA:3.40.630.10 9 401 5.6E-137 T 12-10-2018 YpsIP31758_0680 dfab32463162bcbb70aeb4ec02bbf4e3 410 PIRSF PIRSF037215 4 410 5.4E-158 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YpsIP31758_3561 50a9544ed1c33d779c28a8d08430a972 208 SUPERFAMILY SSF159709 13 207 1.07E-54 T 12-10-2018 IPR038058 PhnH-like superfamily YpsIP31758_3561 50a9544ed1c33d779c28a8d08430a972 208 PIRSF PIRSF020680 1 208 4.3E-51 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YpsIP31758_3561 50a9544ed1c33d779c28a8d08430a972 208 Gene3D G3DSA:3.40.50.11310 1 208 9.5E-62 T 12-10-2018 IPR038058 PhnH-like superfamily YpsIP31758_3561 50a9544ed1c33d779c28a8d08430a972 208 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 206 1.0E-65 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YpsIP31758_3561 50a9544ed1c33d779c28a8d08430a972 208 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 204 2.0E-48 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 Gene3D G3DSA:3.30.420.40 242 483 2.7E-91 T 12-10-2018 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.3E-83 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 Gene3D G3DSA:3.30.420.40 1 241 2.6E-92 T 12-10-2018 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 PIRSF PIRSF000538 1 484 4.1E-137 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 SUPERFAMILY SSF53067 2 242 3.79E-73 T 12-10-2018 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 436 5.0E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.6E-184 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_4103 15eb4da1c2b6e3e682f9d7abe251004b 484 SUPERFAMILY SSF53067 242 482 1.94E-64 T 12-10-2018 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 Gene3D G3DSA:3.20.20.20 1 277 3.1E-113 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 1.6E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 SUPERFAMILY SSF51717 5 274 2.49E-106 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_3601 d47f312a4135193168b2e794af9e0eae 277 Pfam PF00809 Pterin binding enzyme 18 257 1.8E-89 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 SUPERFAMILY SSF53697 14 325 1.74E-66 T 12-10-2018 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.40.50.10490 11 200 2.9E-64 T 12-10-2018 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 PIRSF PIRSF004692 2 328 3.7E-135 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.10.580.10 201 325 1.4E-47 T 12-10-2018 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 274 325 1.6E-6 T 12-10-2018 IPR000644 CBS domain YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 206 261 1.7E-7 T 12-10-2018 IPR000644 CBS domain YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF01380 SIS domain 46 177 3.7E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 2.0E-122 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 280 327 1.9 T 12-10-2018 IPR000644 CBS domain YpsIP31758_0446 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 215 263 1.2 T 12-10-2018 IPR000644 CBS domain YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 3.5E-64 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 8.0E-80 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 SUPERFAMILY SSF89447 1 138 4.5E-46 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.15 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 Gene3D G3DSA:2.40.330.20 1 150 1.8E-43 T 12-10-2018 IPR038619 MraZ superfamily YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.6E-24 T 12-10-2018 IPR020603 MraZ domain YpsIP31758_3396 b833ba7b181871873622463393d0e29c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 1.5E-20 T 12-10-2018 IPR020603 MraZ domain YpsIP31758_0152 b6f5aae124cdecea55536015df89bb56 112 Pfam PF04219 Protein of unknown function, DUF 10 98 8.1E-40 T 12-10-2018 IPR007335 Protein of unknown function DUF413 YpsIP31758_3737 8b0c19ec8c2810134a6e2577e8e9444d 128 Gene3D G3DSA:3.40.50.1010 1 125 2.0E-10 T 12-10-2018 YpsIP31758_3737 8b0c19ec8c2810134a6e2577e8e9444d 128 SUPERFAMILY SSF88723 1 125 6.17E-21 T 12-10-2018 IPR029060 PIN-like domain superfamily YpsIP31758_3737 8b0c19ec8c2810134a6e2577e8e9444d 128 Pfam PF01850 PIN domain 5 117 7.6E-13 T 12-10-2018 IPR002716 PIN domain YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF63380 3 99 8.78E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:2.40.30.10 1 96 7.7E-30 T 12-10-2018 YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 1.2E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 5.4E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:3.40.50.80 97 248 4.8E-41 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_0099 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF52343 104 248 2.62E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_2892 4bd02a0afa7c8aa07056cde0e595990f 144 Gene3D G3DSA:3.30.530.20 3 144 8.8E-40 T 12-10-2018 IPR023393 START-like domain superfamily YpsIP31758_2892 4bd02a0afa7c8aa07056cde0e595990f 144 SUPERFAMILY SSF55961 1 143 6.56E-36 T 12-10-2018 YpsIP31758_2892 4bd02a0afa7c8aa07056cde0e595990f 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 9.2E-34 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.30.30.30 115 195 1.8E-33 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01382 124 251 1.3E-89 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:4.10.950.10 196 273 5.2E-37 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-34 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.315 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.40.50.140 1 114 4.6E-51 T 12-10-2018 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50104 127 269 1.14E-59 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 1.8E-55 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 8.0E-132 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 PIRSF PIRSF002158 12 274 1.8E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3912 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01383 42 118 3.6E-48 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 SMART SM00987 49 210 2.1E-41 T 12-10-2018 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.0E-88 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.576 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 SMART SM00986 49 210 2.1E-41 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 Gene3D G3DSA:3.40.470.10 2 228 1.3E-106 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 5.0E-23 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1121 9de701458ac7e244e59afc3a5bdf31e3 228 SUPERFAMILY SSF52141 6 221 2.83E-96 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YpsIP31758_1939 7bd7da05052cb8fde01c837fcdaa7e3e 104 SMART SM00749 42 104 6.4E-8 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria YpsIP31758_1939 7bd7da05052cb8fde01c837fcdaa7e3e 104 Pfam PF04972 BON domain 37 103 4.7E-21 T 12-10-2018 IPR007055 BON domain YpsIP31758_3307 312328de8eb35b71dc240f5dbabd8b2f 66 SUPERFAMILY SSF54786 1 64 1.88E-11 T 12-10-2018 YpsIP31758_3307 312328de8eb35b71dc240f5dbabd8b2f 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 9.7E-13 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 YpsIP31758_3307 312328de8eb35b71dc240f5dbabd8b2f 66 Gene3D G3DSA:3.30.920.30 1 66 8.9E-20 T 12-10-2018 IPR038570 HicA superfamily YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF55961 160 371 8.63E-35 T 12-10-2018 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:3.90.380.10 160 246 1.0E-12 T 12-10-2018 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 373 75.728 T 12-10-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 1.8E-19 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:3.90.380.10 247 374 3.0E-6 T 12-10-2018 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF50022 18 160 6.29E-46 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:2.102.10.10 44 159 6.3E-37 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 372 4.0E-21 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 1.2E-23 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 1.2E-23 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.2E-23 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.2E-23 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 YpsIP31758_1516 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 1.2E-23 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:3.40.50.300 1 238 1.2E-74 T 12-10-2018 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF52540 4 243 2.05E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 Pfam PF00005 ABC transporter 21 161 3.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.140 292 345 2.2E-29 T 12-10-2018 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 Pfam PF08402 TOBE domain 281 353 2.6E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF50331 236 362 4.86E-32 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 SMART SM00382 28 211 7.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0308 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.100 239 291 6.8E-19 T 12-10-2018 YpsIP31758_1847 7595059b8022c42edf15f8e2ae8e09f4 272 Gene3D G3DSA:3.40.50.300 6 234 4.0E-63 T 12-10-2018 YpsIP31758_1847 7595059b8022c42edf15f8e2ae8e09f4 272 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1847 7595059b8022c42edf15f8e2ae8e09f4 272 Pfam PF00005 ABC transporter 35 174 6.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1847 7595059b8022c42edf15f8e2ae8e09f4 272 SMART SM00382 44 223 1.0E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1847 7595059b8022c42edf15f8e2ae8e09f4 272 SUPERFAMILY SSF52540 16 248 5.74E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3172 1773cd52b1519fa9f929afc8a250b807 248 Gene3D G3DSA:1.10.10.2690 128 234 1.1E-22 T 12-10-2018 YpsIP31758_3172 1773cd52b1519fa9f929afc8a250b807 248 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 147 223 1.8E-12 T 12-10-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 YpsIP31758_2712 d6e87075e7b2d148bdc5cdb12b33ef57 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 8.8E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2712 d6e87075e7b2d148bdc5cdb12b33ef57 366 Gene3D G3DSA:1.10.3720.10 123 355 4.8E-18 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2712 d6e87075e7b2d148bdc5cdb12b33ef57 366 SUPERFAMILY SSF161098 130 346 6.67E-15 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 SMART SM00354 4 71 2.5E-4 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 Gene3D G3DSA:3.40.50.2300 164 335 1.5E-45 T 12-10-2018 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 SUPERFAMILY SSF53822 75 340 7.07E-42 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 Pfam PF13377 Periplasmic binding protein-like domain 173 338 1.1E-28 T 12-10-2018 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 Gene3D G3DSA:3.40.50.2300 75 330 1.5E-45 T 12-10-2018 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 46 4.6E-8 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 Gene3D G3DSA:1.10.260.40 1 60 3.8E-9 T 12-10-2018 YpsIP31758_0927 7c3b3670e72c86095ed9f7a59a1fd680 360 SUPERFAMILY SSF47413 5 59 2.72E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 503 689 6.5E-20 T 12-10-2018 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 Pfam PF06733 DEAD_2 199 263 2.9E-7 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 Pfam PF13307 Helicase C-terminal domain 534 688 5.1E-24 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 SUPERFAMILY SSF52540 15 672 6.14E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00487 23 307 0.0016 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00488 18 294 0.0035 T 12-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 SMART SM00491 545 677 2.9E-32 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 Gene3D G3DSA:3.40.50.300 26 287 1.8E-39 T 12-10-2018 YpsIP31758_2777 0a2405c5166ed03fb14226fde1073b4c 726 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.555 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 YpsIP31758_0257 3264b72bde69d9d0f4b5fde73c88f8e8 295 SUPERFAMILY SSF161098 56 283 6.28E-50 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0257 3264b72bde69d9d0f4b5fde73c88f8e8 295 Gene3D G3DSA:1.10.3720.10 52 293 2.1E-57 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0257 3264b72bde69d9d0f4b5fde73c88f8e8 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2077 67a337861720496ab9155bf8acfcb3bb 169 Gene3D G3DSA:3.30.420.10 20 169 2.6E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_2077 67a337861720496ab9155bf8acfcb3bb 169 SUPERFAMILY SSF53098 27 166 3.19E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_2077 67a337861720496ab9155bf8acfcb3bb 169 Pfam PF00665 Integrase core domain 26 125 7.7E-20 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 Pfam PF00005 ABC transporter 285 439 2.7E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 Gene3D G3DSA:3.40.50.300 4 248 7.6E-56 T 12-10-2018 YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 SUPERFAMILY SSF52540 9 233 3.76E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 Pfam PF00005 ABC transporter 24 175 3.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 SMART SM00382 294 490 1.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 SMART SM00382 33 223 6.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 SUPERFAMILY SSF52540 280 499 6.86E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 Gene3D G3DSA:3.40.50.300 275 506 2.7E-40 T 12-10-2018 YpsIP31758_2423 9d804ce55459a855a59aafe6b378b92f 513 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3252 ac242ad0e7ba64e2267deacfc80e372a 205 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 200 2.3E-35 T 12-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YpsIP31758_3252 ac242ad0e7ba64e2267deacfc80e372a 205 SUPERFAMILY SSF141318 49 202 1.31E-43 T 12-10-2018 IPR036215 TM0957-like superfamily YpsIP31758_3252 ac242ad0e7ba64e2267deacfc80e372a 205 PIRSF PIRSF033535 1 204 1.2E-83 T 12-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YpsIP31758_4027 165e4617c210d8bb9b33c48c4bf54861 227 Gene3D G3DSA:2.60.120.10 2 227 2.9E-89 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_4027 165e4617c210d8bb9b33c48c4bf54861 227 Pfam PF07385 D-lyxose isomerase 1 223 4.2E-100 T 12-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 YpsIP31758_1328 bfae9dcde066e749afbcdd2edf8ae569 137 Pfam PF10697 Protein of unknown function (DUF2502) 39 126 7.3E-36 T 12-10-2018 IPR019638 Protein of unknown function DUF2502 YpsIP31758_2566 163388197bfac711c69aa57e40fde48e 242 Gene3D G3DSA:1.10.10.2250 1 78 2.1E-39 T 12-10-2018 YpsIP31758_2566 163388197bfac711c69aa57e40fde48e 242 Gene3D G3DSA:1.10.10.2260 88 195 2.8E-54 T 12-10-2018 YpsIP31758_2566 163388197bfac711c69aa57e40fde48e 242 Pfam PF04288 MukE-like family 10 226 2.4E-126 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YpsIP31758_2566 163388197bfac711c69aa57e40fde48e 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 52.24 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.2E-33 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 Gene3D G3DSA:1.20.58.110 1 87 3.8E-31 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.359 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 SUPERFAMILY SSF46992 3 86 1.44E-31 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3462 3e4d4a45eb2b8cfecfba22d75630d56c 87 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3845 fc004461e406bc603cb0f8a75d06c0b3 233 PIRSF PIRSF006993 1 233 9.3E-118 T 12-10-2018 IPR016500 Uncharacterised conserved protein UCP006993 YpsIP31758_3845 fc004461e406bc603cb0f8a75d06c0b3 233 Pfam PF07356 Protein of unknown function (DUF1481) 44 229 5.1E-76 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 YpsIP31758_3845 fc004461e406bc603cb0f8a75d06c0b3 233 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 11 35 5.9E-5 T 12-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site YpsIP31758_2352 fd6cca415565595131f78e5e75b11a49 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-19 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 YpsIP31758_2352 fd6cca415565595131f78e5e75b11a49 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 4.0E-27 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 YpsIP31758_2352 fd6cca415565595131f78e5e75b11a49 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.122 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 YpsIP31758_2109 13c792a7e8a541ada3775048e48ebfae 664 Gene3D G3DSA:3.60.120.10 159 336 3.7E-7 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_2109 13c792a7e8a541ada3775048e48ebfae 664 SUPERFAMILY SSF56322 147 656 1.16E-46 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_2109 13c792a7e8a541ada3775048e48ebfae 664 Pfam PF00425 chorismate binding enzyme 400 646 3.2E-42 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YpsIP31758_2109 13c792a7e8a541ada3775048e48ebfae 664 Gene3D G3DSA:3.60.120.10 351 660 4.6E-47 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_2047 55cd199d4ab4d37408054b73f4bb3896 309 Gene3D G3DSA:3.30.360.10 127 309 1.7E-57 T 12-10-2018 YpsIP31758_2047 55cd199d4ab4d37408054b73f4bb3896 309 Gene3D G3DSA:3.40.50.720 6 126 2.8E-31 T 12-10-2018 YpsIP31758_2047 55cd199d4ab4d37408054b73f4bb3896 309 SUPERFAMILY SSF55347 132 271 3.92E-45 T 12-10-2018 YpsIP31758_2047 55cd199d4ab4d37408054b73f4bb3896 309 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 2.1E-25 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_2047 55cd199d4ab4d37408054b73f4bb3896 309 SUPERFAMILY SSF51735 9 143 1.32E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 Gene3D G3DSA:3.30.110.10 84 183 4.2E-37 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 SUPERFAMILY SSF55200 90 182 2.75E-32 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 Gene3D G3DSA:3.10.20.80 10 83 7.7E-33 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 182 8.1E-74 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 SUPERFAMILY SSF54364 13 86 4.05E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 180 1.2E-35 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 30.388 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_1713 dd0085454e06b6e1bcadaa918786fc9a 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.7E-31 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 SMART SM00382 37 178 1.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 432 512 9.5E-22 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 514 655 1.5E-60 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.6E-42 T 12-10-2018 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Gene3D G3DSA:1.10.8.60 8 240 1.1E-103 T 12-10-2018 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Gene3D G3DSA:1.20.272.10 242 363 5.9E-44 T 12-10-2018 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 SUPERFAMILY SSF48019 243 367 1.87E-35 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Gene3D G3DSA:3.30.300.150 512 640 8.3E-47 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 3.0E-134 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 SUPERFAMILY SSF52540 35 222 1.98E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 2.5E-32 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 YpsIP31758_3059 89dd382fec166a7187abd5da29a97e59 658 Gene3D G3DSA:3.40.50.300 13 177 1.1E-103 T 12-10-2018 YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 Pfam PF00005 ABC transporter 17 172 3.8E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 SMART SM00382 26 223 3.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 Gene3D G3DSA:3.40.50.300 1 248 4.5E-65 T 12-10-2018 YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 SUPERFAMILY SSF52540 2 231 1.66E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1743 05e971b3a11ce43dd8cbd0d07ef88578 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 8.5E-112 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 YpsIP31758_2417 8a0f2581aa5a809d0ab8708f1d3428b0 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 3.8E-47 T 12-10-2018 IPR007458 Protein of unknown function DUF496 YpsIP31758_2417 8a0f2581aa5a809d0ab8708f1d3428b0 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.92 T 12-10-2018 IPR007458 Protein of unknown function DUF496 YpsIP31758_2417 8a0f2581aa5a809d0ab8708f1d3428b0 105 PIRSF PIRSF028773 1 105 1.0E-50 T 12-10-2018 IPR007458 Protein of unknown function DUF496 YpsIP31758_2417 8a0f2581aa5a809d0ab8708f1d3428b0 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 3.0E-43 T 12-10-2018 IPR007458 Protein of unknown function DUF496 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 SMART SM00418 8 86 5.7E-27 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 SUPERFAMILY SSF46785 2 91 3.54E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.7E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 1.7E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.7E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.7E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 4.1E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YpsIP31758_3281 e76c073ddfe062cdb9b70567640bad59 113 Gene3D G3DSA:1.10.10.10 4 92 1.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:1.20.150.20 383 513 2.5E-50 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF52540 96 381 1.32E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.2E-261 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF47917 383 511 1.36E-45 T 12-10-2018 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.3E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.111 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:3.40.50.300 94 382 6.8E-133 T 12-10-2018 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.4E-45 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YpsIP31758_4178 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.5E-13 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_0241 0f174b6e35fc67a567d9cfe7ed461537 317 Pfam PF02687 FtsX-like permease family 218 307 2.4E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_0241 0f174b6e35fc67a567d9cfe7ed461537 317 PIRSF PIRSF003097 16 313 1.2E-94 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 YpsIP31758_0241 0f174b6e35fc67a567d9cfe7ed461537 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 1.6E-130 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 439 1.4E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 SUPERFAMILY SSF47384 217 291 3.73E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 SUPERFAMILY SSF55874 293 442 1.7E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 Pfam PF00672 HAMP domain 182 225 7.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 SMART SM00387 332 440 2.5E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 Gene3D G3DSA:3.30.565.10 294 443 4.1E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 SMART SM00304 180 232 1.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 Gene3D G3DSA:1.10.287.130 178 288 2.1E-22 T 12-10-2018 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 5.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 SMART SM00388 233 293 2.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3979 f68eed3a7ad6bcc82d804887ac6d51e0 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Pfam PF13522 Glutamine amidotransferase domain 65 184 3.6E-21 T 12-10-2018 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Gene3D G3DSA:3.60.20.10 2 241 7.8E-82 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 SUPERFAMILY SSF53697 245 609 9.39E-113 T 12-10-2018 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 SUPERFAMILY SSF56235 2 233 2.14E-74 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Pfam PF01380 SIS domain 289 417 1.9E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Pfam PF01380 SIS domain 462 591 1.6E-28 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Gene3D G3DSA:3.40.50.10490 447 594 1.9E-153 T 12-10-2018 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Gene3D G3DSA:3.40.50.10490 249 608 1.9E-153 T 12-10-2018 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 2.4E-263 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 YpsIP31758_4173 cf2ef80a224f3b400fb235ae66eca2ca 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.954 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 165 266 6.1E-54 T 12-10-2018 YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF46785 3 83 1.51E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 91 292 6.1E-54 T 12-10-2018 YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:1.10.10.10 2 90 4.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF03466 LysR substrate binding domain 88 295 2.8E-34 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1994 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF53850 89 298 5.07E-36 T 12-10-2018 YpsIP31758_A0064 cbf33587e0ca3304374ddc432c2811ad 354 Gene3D G3DSA:1.20.81.30 8 126 4.8E-11 T 12-10-2018 YpsIP31758_A0064 cbf33587e0ca3304374ddc432c2811ad 354 Pfam PF00482 Type II secretion system (T2SS), protein F 228 345 5.0E-9 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 PIRSF PIRSF006281 1 511 9.2E-244 T 12-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 SUPERFAMILY SSF81296 397 510 8.4E-33 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 SUPERFAMILY SSF74650 23 394 1.38E-165 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 3.9E-198 T 12-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 61.935 T 12-10-2018 IPR023704 Glucan biosynthesis protein G YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 Gene3D G3DSA:2.70.98.10 22 397 2.5E-170 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 YpsIP31758_1552 a5cfe86d89e44c77c4e2888f42d44c35 511 Gene3D G3DSA:2.60.40.10 398 511 1.4E-49 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 73.527 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Gene3D G3DSA:3.30.70.330 388 459 2.2E-20 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 SUPERFAMILY SSF52540 74 354 8.83E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 SMART SM00487 23 220 4.4E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Gene3D G3DSA:3.40.50.300 216 387 3.4E-47 T 12-10-2018 YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.4E-44 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Pfam PF00271 Helicase conserved C-terminal domain 237 337 2.8E-28 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Pfam PF03880 DbpA RNA binding domain 387 457 8.1E-23 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 SMART SM00490 256 337 4.1E-30 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2350 6745016f26c6f574ca6d937860429eb7 460 Gene3D G3DSA:3.40.50.300 4 210 1.4E-68 T 12-10-2018 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 Gene3D G3DSA:2.30.30.790 2 114 3.6E-16 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 Pfam PF01245 Ribosomal protein L19 3 113 1.2E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 PIRSF PIRSF002191 1 115 1.9E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 SUPERFAMILY SSF50104 2 114 3.11E-47 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3225 a1e436bd9273e21431549c822b2d26dd 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.47 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 SUPERFAMILY SSF75217 2 154 2.62E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.9E-46 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 Gene3D G3DSA:3.40.1280.10 1 156 4.2E-51 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 PIRSF PIRSF004505 1 155 5.6E-40 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YpsIP31758_2948 07406b49262ee00ba0b5bc71d1ac5ee7 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.3E-82 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 Gene3D G3DSA:2.40.160.50 186 552 6.3E-76 T 12-10-2018 YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 Pfam PF08479 POTRA domain, ShlB-type 84 157 1.7E-17 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 Gene3D G3DSA:3.10.20.310 85 160 2.2E-8 T 12-10-2018 YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 214 524 2.5E-99 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 PIRSF PIRSF029745 1 562 1.9E-129 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 YpsIP31758_0300 64bd46855b0e59ca4ccc1f2525c87ac0 562 Pfam PF17287 POTRA domain 159 209 7.0E-15 T 12-10-2018 IPR035251 ShlB, POTRA domain YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 7.6E-176 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 SUPERFAMILY SSF51395 433 1187 1.05E-252 T 12-10-2018 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Gene3D G3DSA:3.60.20.10 12 544 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 7.8E-158 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Gene3D G3DSA:3.20.20.70 429 791 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 SUPERFAMILY SSF69336 1210 1464 1.83E-89 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Gene3D G3DSA:3.20.20.70 482 1168 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Pfam PF01493 GXGXG motif 1235 1418 5.8E-76 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Gene3D G3DSA:2.160.20.60 1196 1467 5.3E-103 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 Pfam PF04898 Glutamate synthase central domain 456 736 2.0E-104 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 YpsIP31758_0466 906deca9021d396efd3accb36062d424 1485 SUPERFAMILY SSF56235 12 428 6.95E-150 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.3E-32 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 Gene3D G3DSA:4.10.520.10 1 90 3.3E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 SUPERFAMILY SSF47729 1 90 9.13E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 SMART SM00411 1 90 2.5E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3089 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 242 1.1E-93 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 SUPERFAMILY SSF52402 24 208 1.29E-51 T 12-10-2018 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.4E-87 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 Gene3D G3DSA:3.40.50.620 2 216 1.1E-62 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 4.2E-48 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.292 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 YpsIP31758_3309 2ef882674b9d6a8aa934ff9dc1a11d66 244 PIRSF PIRSF000857 3 244 3.4E-53 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 YpsIP31758_1634 e9c626d75a9d315210be82c69ed61382 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 3.0E-45 T 12-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YpsIP31758_1634 e9c626d75a9d315210be82c69ed61382 116 SUPERFAMILY SSF63592 1 98 4.84E-39 T 12-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily YpsIP31758_1634 e9c626d75a9d315210be82c69ed61382 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 5.1E-40 T 12-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YpsIP31758_1634 e9c626d75a9d315210be82c69ed61382 116 Gene3D G3DSA:1.10.4000.10 1 116 3.2E-48 T 12-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily YpsIP31758_1634 e9c626d75a9d315210be82c69ed61382 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.706 T 12-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 SUPERFAMILY SSF46785 3 109 3.01E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 Pfam PF03466 LysR substrate binding domain 89 292 3.1E-39 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 Gene3D G3DSA:3.40.190.290 91 293 8.4E-53 T 12-10-2018 YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 SUPERFAMILY SSF53850 90 295 1.86E-40 T 12-10-2018 YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0418 cd0e68c944e74351bcf11f31e7aebe80 303 Gene3D G3DSA:1.10.10.10 3 88 4.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1117 4ca9726bdcf4518d64f5fae1cee2e085 245 Pfam PF03746 LamB/YcsF family 3 235 5.4E-94 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 YpsIP31758_1117 4ca9726bdcf4518d64f5fae1cee2e085 245 Gene3D G3DSA:3.20.20.370 1 245 5.9E-101 T 12-10-2018 YpsIP31758_1117 4ca9726bdcf4518d64f5fae1cee2e085 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.935 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 YpsIP31758_1117 4ca9726bdcf4518d64f5fae1cee2e085 245 SUPERFAMILY SSF88713 2 243 2.52E-93 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 SUPERFAMILY SSF75420 6 86 1.29E-24 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 SUPERFAMILY SSF74942 87 154 1.29E-16 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 Pfam PF02576 RimP N-terminal domain 15 86 2.1E-28 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 Pfam PF17384 RimP C-terminal SH3 domain 89 154 1.7E-22 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 Gene3D G3DSA:3.30.300.70 4 83 5.1E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily YpsIP31758_3598 e5aab86d58293b8adb51f7440fc0346c 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 10 154 24.064 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 7.1E-207 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 Gene3D G3DSA:3.40.640.10 1 247 5.8E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 6.9E-142 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 PIRSF PIRSF001434 1 383 7.9E-135 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 Gene3D G3DSA:3.90.1150.10 248 385 2.4E-54 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 SUPERFAMILY SSF53383 5 381 6.39E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0121 c3728eac44535ef80554c37d439642ec 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.90.1150.10 767 902 5.9E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 6.1E-179 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 477 739 1.2E-8 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.392 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 479 953 3.25E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 525 756 2.2E-60 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 96 355 1.6E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 YpsIP31758_0865 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 17 440 8.77E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 Pfam PF12848 ABC transporter 230 306 2.9E-12 T 12-10-2018 IPR032781 ABC-transporter extension domain YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 Gene3D G3DSA:3.40.50.300 286 555 1.1E-76 T 12-10-2018 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.2E-294 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 Gene3D G3DSA:3.40.50.300 1 285 7.4E-89 T 12-10-2018 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 Pfam PF00005 ABC transporter 22 191 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 SUPERFAMILY SSF52540 303 525 1.75E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 SUPERFAMILY SSF52540 11 243 3.47E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 SMART SM00382 348 522 2.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3489 bde896b0d42dd81043991c024689481b 555 SMART SM00382 31 236 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1876 e40b8d164185ad9b526a60b750d89546 309 SUPERFAMILY SSF51395 48 276 2.27E-6 T 12-10-2018 YpsIP31758_1162 8f0a154b9f79ed4953d79bfe820b140c 385 PIRSF PIRSF004925 1 385 1.2E-111 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter YpsIP31758_1162 8f0a154b9f79ed4953d79bfe820b140c 385 SUPERFAMILY SSF103473 7 372 1.96E-38 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1162 8f0a154b9f79ed4953d79bfe820b140c 385 Gene3D G3DSA:1.20.1250.20 186 374 4.6E-36 T 12-10-2018 YpsIP31758_1162 8f0a154b9f79ed4953d79bfe820b140c 385 Gene3D G3DSA:1.20.1250.20 4 180 8.9E-18 T 12-10-2018 YpsIP31758_1162 8f0a154b9f79ed4953d79bfe820b140c 385 Pfam PF12832 MFS_1 like family 8 360 3.9E-50 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain YpsIP31758_1788 e715f5d9e9ca77ae5439b912fd45ffaa 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 3.9E-40 T 12-10-2018 IPR014320 Phage shock protein, PspC YpsIP31758_1788 e715f5d9e9ca77ae5439b912fd45ffaa 119 Pfam PF04024 PspC domain 8 64 8.0E-18 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 SUPERFAMILY SSF53383 1 396 5.97E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.4E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.4E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.4E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.4E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 Gene3D G3DSA:3.90.1150.10 11 391 7.3E-162 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.4E-91 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_2560 b79bf534bb9bbc167993cbba9f5256b5 396 Gene3D G3DSA:3.40.640.10 45 315 7.3E-162 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2193 d748cb9a9d4ce6fd3d2342c1a9489e55 364 SUPERFAMILY SSF69279 11 184 2.04E-26 T 12-10-2018 YpsIP31758_2193 d748cb9a9d4ce6fd3d2342c1a9489e55 364 Pfam PF05954 Phage late control gene D protein (GPD) 87 346 7.3E-32 T 12-10-2018 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 20 377 3.9E-98 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 382 4.8E-122 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.303 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 2.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 2.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 2.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 2.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_1327 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 2.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YpsIP31758_A0065 93547eead2b9d331cda9701cc8ae84df 168 Gene3D G3DSA:3.30.1690.10 38 168 8.3E-23 T 12-10-2018 YpsIP31758_A0065 93547eead2b9d331cda9701cc8ae84df 168 Pfam PF08805 PilS N terminal 45 167 2.7E-20 T 12-10-2018 IPR014911 Type 4 secretion system, PilS, N-terminal YpsIP31758_A0065 93547eead2b9d331cda9701cc8ae84df 168 SUPERFAMILY SSF54523 40 167 1.57E-17 T 12-10-2018 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 Gene3D G3DSA:3.40.605.10 3 254 1.0E-103 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.758 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 3.5E-179 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.9E-227 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 Gene3D G3DSA:3.40.309.10 255 485 1.9E-81 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_2830 e6b202f4bdd12b3869c0a3e9c3f9b4fd 490 SUPERFAMILY SSF53720 7 482 1.57E-172 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_A0060 7eac8aa12f524fb54c0fdba346c97024 568 Pfam PF07655 Secretin N-terminal domain 211 292 3.3E-10 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 YpsIP31758_A0060 7eac8aa12f524fb54c0fdba346c97024 568 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 54 567 1.1E-105 T 12-10-2018 IPR013359 Pilus formation type IVB, outer membrane PilN YpsIP31758_3529 5a6e7ef1e02dcdf5114356b052d31429 360 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 335 1.3E-91 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YpsIP31758_3529 5a6e7ef1e02dcdf5114356b052d31429 360 Pfam PF02378 Phosphotransferase system, EIIC 17 282 5.6E-13 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Gene3D G3DSA:2.60.40.1250 31 167 3.5E-46 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Pfam PF11412 Disulphide bond corrector protein DsbC 39 150 2.0E-36 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Pfam PF13899 Thioredoxin-like 491 563 1.3E-12 T 12-10-2018 YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 SUPERFAMILY SSF52833 476 589 9.55E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 SUPERFAMILY SSF74863 38 153 1.07E-42 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 ProSitePatterns PS00194 Thioredoxin family active site. 499 517 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Gene3D G3DSA:3.40.30.10 466 591 1.9E-35 T 12-10-2018 YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 403 1.8E-20 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YpsIP31758_3681 2f483c70c6d8505aafe89ce83e784d01 595 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 591 41.063 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 SUPERFAMILY SSF102114 21 211 1.14E-22 T 12-10-2018 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF04055 Radical SAM superfamily 22 176 4.9E-31 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 4 236 2.1E-106 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 Gene3D G3DSA:3.20.20.70 1 244 8.4E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2591 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF13353 4Fe-4S single cluster domain 14 128 7.5E-18 T 12-10-2018 YpsIP31758_3618 1834649026af33c0268bc7cb1a058b3f 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 6.1E-22 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_3618 1834649026af33c0268bc7cb1a058b3f 87 SUPERFAMILY SSF159871 4 87 1.7E-26 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_3618 1834649026af33c0268bc7cb1a058b3f 87 Gene3D G3DSA:3.30.1660.10 21 87 9.3E-24 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 Gene3D G3DSA:1.20.1250.20 209 410 1.8E-61 T 12-10-2018 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 SUPERFAMILY SSF103473 12 407 4.84E-48 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 13 408 5.4E-190 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 Pfam PF01306 LacY proton/sugar symporter 9 412 3.7E-190 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 110 132 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 353 373 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 152 170 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 291 317 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 267 288 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 75 104 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 221 249 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 PRINTS PR00174 LacY proton/sugar symporter family signature 322 341 3.8E-106 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 YpsIP31758_2394 622fe1c806ed70e8e1d337c38c15a2fd 435 Gene3D G3DSA:1.20.1250.20 9 208 1.3E-54 T 12-10-2018 YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 Pfam PF03023 MviN-like protein 28 477 1.1E-152 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PIRSF PIRSF002869 1 510 1.9E-178 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 507 1.8E-166 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.273 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_2046 a67abc1bbd852480b98cbc618b0eb07d 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YpsIP31758_0186 10b058631ec3a3f651cd1198778c708f 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 3.1E-159 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 YpsIP31758_0186 10b058631ec3a3f651cd1198778c708f 355 Gene3D G3DSA:3.40.50.720 3 326 9.9E-138 T 12-10-2018 YpsIP31758_0186 10b058631ec3a3f651cd1198778c708f 355 Gene3D G3DSA:3.90.25.10 202 335 9.9E-138 T 12-10-2018 YpsIP31758_0186 10b058631ec3a3f651cd1198778c708f 355 SUPERFAMILY SSF51735 3 339 2.49E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0186 10b058631ec3a3f651cd1198778c708f 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 7.4E-98 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 4.6E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 Gene3D G3DSA:3.40.190.10 110 205 2.2E-85 T 12-10-2018 YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 Gene3D G3DSA:3.40.190.10 35 242 2.2E-85 T 12-10-2018 YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 SUPERFAMILY SSF53850 8 244 5.98E-75 T 12-10-2018 YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 SMART SM00079 26 244 5.8E-8 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YpsIP31758_1495 c3b6e9c6632b9b9d0385c930744a3f21 247 SMART SM00062 26 245 2.1E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 237 31.002 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 SMART SM00945 5 119 5.0E-61 T 12-10-2018 IPR016103 ProQ/FinO domain YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 Gene3D G3DSA:1.10.1710.10 1 131 8.8E-25 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 SUPERFAMILY SSF48657 5 119 1.96E-39 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 Pfam PF04352 ProQ/FINO family 8 115 7.6E-43 T 12-10-2018 IPR016103 ProQ/FinO domain YpsIP31758_1671 66ceecd20b3b8c89f75e10c2f338b8d8 237 Pfam PF17516 ProQ C-terminal domain 187 237 7.9E-25 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.1E-212 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 SMART SM00994 12 51 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:3.40.50.300 62 315 3.4E-108 T 12-10-2018 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 SUPERFAMILY SSF52540 63 402 7.64E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 SMART SM01086 317 412 4.5E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.371 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 12-10-2018 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 5.7E-17 T 12-10-2018 IPR019489 Clp ATPase, C-terminal YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 SMART SM00382 111 333 6.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.2E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_3091 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:1.10.8.60 316 423 6.1E-42 T 12-10-2018 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.408 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF00682 HMGL-like 4 273 1.5E-105 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 7.3E-37 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Gene3D G3DSA:1.10.238.260 280 392 3.7E-33 T 12-10-2018 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 SMART SM00917 369 500 2.0E-38 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF51569 1 291 1.43E-100 T 12-10-2018 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF110921 392 499 6.67E-26 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Gene3D G3DSA:3.30.160.270 393 501 9.7E-12 T 12-10-2018 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 7.0E-252 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YpsIP31758_3405 3bcf9ae13a6e102280e48b5b71576fa0 520 Gene3D G3DSA:3.20.20.70 1 277 5.7E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2572 25a4e74835404380a7460ec3fdfb6aed 60 Gene3D G3DSA:2.20.25.10 8 60 3.9E-23 T 12-10-2018 YpsIP31758_2572 25a4e74835404380a7460ec3fdfb6aed 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.854 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 YpsIP31758_2572 25a4e74835404380a7460ec3fdfb6aed 60 SUPERFAMILY SSF158997 1 54 9.42E-20 T 12-10-2018 YpsIP31758_2572 25a4e74835404380a7460ec3fdfb6aed 60 Pfam PF03966 Trm112p-like protein 2 41 4.1E-9 T 12-10-2018 IPR005651 Trm112-like YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 4.3E-58 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 8.1E-214 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 3.7E-41 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52467 184 342 4.48E-57 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.970 344 522 6.4E-119 T 12-10-2018 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.970 1 175 9.8E-70 T 12-10-2018 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52518 357 546 4.47E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.1220 187 343 6.4E-119 T 12-10-2018 YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52518 1 174 2.31E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_0154 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.7E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_1161 cec1f24e83f5090f01eb7aca30558e5f 453 Gene3D G3DSA:1.10.1790.10 258 357 3.6E-13 T 12-10-2018 YpsIP31758_1161 cec1f24e83f5090f01eb7aca30558e5f 453 Pfam PF00874 PRD domain 266 355 8.8E-16 T 12-10-2018 IPR011608 PRD domain GO:0006355 YpsIP31758_1161 cec1f24e83f5090f01eb7aca30558e5f 453 SUPERFAMILY SSF63520 258 359 1.7E-18 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 SMART SM00863 653 696 9.0E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Gene3D G3DSA:3.30.980.10 563 697 2.5E-52 T 12-10-2018 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 SUPERFAMILY SSF55186 552 711 7.98E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 SUPERFAMILY SSF101353 256 464 1.44E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Gene3D G3DSA:3.10.310.40 764 872 2.8E-36 T 12-10-2018 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.1E-33 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.1E-33 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.1E-33 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.1E-33 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 SUPERFAMILY SSF50447 456 552 1.07E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Pfam PF01411 tRNA synthetases class II (A) 7 553 3.9E-233 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 4.0E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Gene3D G3DSA:3.30.930.10 2 252 6.7E-123 T 12-10-2018 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 SUPERFAMILY SSF55681 4 255 4.22E-108 T 12-10-2018 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Gene3D G3DSA:3.30.54.20 624 677 2.5E-52 T 12-10-2018 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 206.01 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Pfam PF02272 DHHA1 domain 733 871 1.4E-30 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 YpsIP31758_3238 512c56657b07c2289c848935eee704b7 875 Gene3D G3DSA:2.40.30.130 462 562 8.1E-10 T 12-10-2018 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 SUPERFAMILY SSF46689 218 270 7.62E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 Gene3D G3DSA:1.10.10.60 165 276 3.0E-19 T 12-10-2018 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 SUPERFAMILY SSF51215 34 154 8.63E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 Pfam PF12833 Helix-turn-helix domain 190 265 2.8E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2286 ff9964287402bbd914aafc52684b49e4 291 SMART SM00342 183 265 2.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1790 8114143ce0a0b4ef1b814e2d4136edae 465 Pfam PF04317 YcjX-like family, DUF463 20 464 4.9E-188 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein YpsIP31758_1790 8114143ce0a0b4ef1b814e2d4136edae 465 PIRSF PIRSF019381 1 465 2.7E-219 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 SUPERFAMILY SSF49584 156 241 5.89E-14 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 SUPERFAMILY SSF49354 23 149 3.92E-42 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 1.1E-13 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Gene3D G3DSA:2.60.40.10 152 243 3.2E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Gene3D G3DSA:2.60.40.10 30 149 3.1E-40 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 131 146 2.4E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 29 38 2.4E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 78 99 2.4E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 106 123 2.4E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 PRINTS PR00969 Pili chaperone signature 170 185 2.4E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_0170 fe4ad227e19f6f018d9d22f0fcc93f7c 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 149 6.2E-42 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 329 399 4.9E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 Pfam PF07559 Flagellar basal body protein FlaE 172 283 1.4E-17 T 12-10-2018 IPR011491 Flagellar hook protein FlgE YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 SUPERFAMILY SSF117143 73 363 1.09E-75 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 Pfam PF00460 Flagella basal body rod protein 4 33 4.1E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 384 1.2E-93 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_0642 9a8796de6b2d591e19b8466435d2a2da 402 Gene3D G3DSA:2.60.98.20 144 284 1.1E-26 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily YpsIP31758_1850 24215e75e545b65a9b30b7e29664cb0e 217 SUPERFAMILY SSF141318 53 217 1.01E-50 T 12-10-2018 IPR036215 TM0957-like superfamily YpsIP31758_1850 24215e75e545b65a9b30b7e29664cb0e 217 PIRSF PIRSF033535 7 217 6.4E-51 T 12-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YpsIP31758_1850 24215e75e545b65a9b30b7e29664cb0e 217 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 24 214 1.1E-50 T 12-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 PIRSF PIRSF006004 24 391 5.3E-147 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 383 7.6E-171 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.814 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 SUPERFAMILY SSF102114 130 348 5.1E-15 T 12-10-2018 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 Gene3D G3DSA:1.10.150.530 1 92 7.5E-30 T 12-10-2018 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 Gene3D G3DSA:3.20.20.70 93 363 1.9E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1183 6b5c4a9d911703b2d4dbf8645d553885 398 Pfam PF04055 Radical SAM superfamily 134 303 1.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 179 345 1.7E-54 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 176 349 4.7E-69 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 5.3E-199 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 2.8E-68 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 44 175 8.6E-58 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 PIRSF PIRSF000808 1 341 7.5E-122 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 4 177 3.69E-72 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_2856 681f8727fdec15b8108370597c5aaf32 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 6.4E-71 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 YpsIP31758_4025 93c9fe07eb3210ea53b1bb06ba7a3628 335 Pfam PF00294 pfkB family carbohydrate kinase 29 319 6.2E-34 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_4025 93c9fe07eb3210ea53b1bb06ba7a3628 335 SUPERFAMILY SSF53613 6 328 6.24E-53 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_4025 93c9fe07eb3210ea53b1bb06ba7a3628 335 Gene3D G3DSA:3.40.1190.20 2 334 1.7E-53 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2050 3064cf68c32a45a94dde160a991419fd 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.633 T 12-10-2018 IPR022855 Multidrug resistance protein MdtH YpsIP31758_2050 3064cf68c32a45a94dde160a991419fd 401 Pfam PF07690 Major Facilitator Superfamily 20 234 3.3E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2050 3064cf68c32a45a94dde160a991419fd 401 Gene3D G3DSA:1.20.1250.20 13 386 1.2E-47 T 12-10-2018 YpsIP31758_2050 3064cf68c32a45a94dde160a991419fd 401 SUPERFAMILY SSF103473 14 392 7.19E-53 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.522 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 Gene3D G3DSA:3.30.2350.20 16 336 7.2E-121 T 12-10-2018 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 Gene3D G3DSA:3.30.2340.10 166 300 7.2E-121 T 12-10-2018 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 336 2.2E-19 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 1.2E-41 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 SUPERFAMILY SSF55120 3 339 2.59E-106 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3297 579129eaafb4296579db84cd33f26a48 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 340 3.6E-80 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF48013 6 149 4.91E-36 T 12-10-2018 IPR035926 NusB-like superfamily YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.30.70.1170 173 230 3.6E-26 T 12-10-2018 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.287.730 146 172 7.5E-15 T 12-10-2018 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 2.9E-174 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 9.4E-77 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.9E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.9E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.9E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.9E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.9E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF53335 142 429 8.29E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.40.50.150 231 429 1.2E-72 T 12-10-2018 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.940.10 1 145 1.2E-47 T 12-10-2018 IPR035926 NusB-like superfamily YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01029 NusB family 6 127 4.6E-25 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 70.041 T 12-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 YpsIP31758_3884 2c9c6315e1c5cb203e02475cfb37b0ab 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.7E-23 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.7E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.7E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 SMART SM00895 90 217 8.1E-22 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 SUPERFAMILY SSF48008 88 224 1.86E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 SUPERFAMILY SSF46785 2 70 2.36E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 Gene3D G3DSA:1.20.120.530 85 226 5.3E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 Gene3D G3DSA:1.10.10.10 1 71 3.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 SMART SM00345 7 66 2.3E-24 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2703 fd2c84e9e0f81013695a15cea7038f12 247 Pfam PF07729 FCD domain 90 216 3.9E-22 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SUPERFAMILY SSF69322 176 518 1.16E-16 T 12-10-2018 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SUPERFAMILY SSF50978 3 288 1.17E-47 T 12-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Gene3D G3DSA:2.130.10.10 80 308 2.3E-31 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Gene3D G3DSA:2.130.10.10 336 546 4.0E-15 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 19 33 - T 12-10-2018 IPR019775 WD40 repeat, conserved site YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 142 156 - T 12-10-2018 IPR019775 WD40 repeat, conserved site YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Pfam PF00400 WD domain, G-beta repeat 118 155 2.8E-7 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Pfam PF00400 WD domain, G-beta repeat 79 113 6.7E-6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Pfam PF00400 WD domain, G-beta repeat 44 73 2.8E-4 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 PRINTS PR00320 G protein beta WD-40 repeat signature 142 156 7.8E-5 T 12-10-2018 IPR020472 G-protein beta WD-40 repeat YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 PRINTS PR00320 G protein beta WD-40 repeat signature 60 74 7.8E-5 T 12-10-2018 IPR020472 G-protein beta WD-40 repeat YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 PRINTS PR00320 G protein beta WD-40 repeat signature 19 33 7.8E-5 T 12-10-2018 IPR020472 G-protein beta WD-40 repeat YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 431 471 30.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 474 511 160.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 117 155 4.0E-9 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 189 235 1.8 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 35 73 4.3E-6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 392 429 26.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 1 32 250.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 SMART SM00320 76 115 1.6E-5 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 YpsIP31758_B0063 1aefa9fcb96df82c5da07642aa7783b5 553 Gene3D G3DSA:2.130.10.10 1 79 1.6E-15 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 109 179 3.4E-17 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 3 94 3.92E-22 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 107 176 2.5E-23 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 245 317 5.5E-30 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 241 317 2.62E-19 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 PIRSF PIRSF014774 1 317 2.9E-186 T 12-10-2018 IPR025539 YdgH protein YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 3.3E-19 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 4.1E-20 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 5.9E-21 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_1829 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 22 91 1.6E-25 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_2770 5013ba42746c9c1b70dd24d4e82c3fe1 376 SUPERFAMILY SSF47240 3 340 1.79E-111 T 12-10-2018 IPR009078 Ferritin-like superfamily YpsIP31758_2770 5013ba42746c9c1b70dd24d4e82c3fe1 376 Gene3D G3DSA:1.10.620.20 2 340 6.8E-147 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 YpsIP31758_2770 5013ba42746c9c1b70dd24d4e82c3fe1 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 1.2E-45 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_2770 5013ba42746c9c1b70dd24d4e82c3fe1 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_0237 47ac2b8136d5bb9db564377881bc68f7 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 6.9E-27 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 YpsIP31758_3182 154e24c443239018de19159e3620856c 222 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 195 1.1E-40 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_3182 154e24c443239018de19159e3620856c 222 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 1.8E-73 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 YpsIP31758_3182 154e24c443239018de19159e3620856c 222 Gene3D G3DSA:3.40.225.10 1 201 1.1E-50 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3182 154e24c443239018de19159e3620856c 222 SUPERFAMILY SSF53639 3 199 3.73E-45 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3182 154e24c443239018de19159e3620856c 222 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 122.121 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 YpsIP31758_3182 154e24c443239018de19159e3620856c 222 SMART SM01007 8 196 1.1E-48 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_4159 8487f9be570c4ee27f5c1fd5e82d5c02 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.523 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_4159 8487f9be570c4ee27f5c1fd5e82d5c02 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.6E-38 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_4159 8487f9be570c4ee27f5c1fd5e82d5c02 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.9E-107 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_4159 8487f9be570c4ee27f5c1fd5e82d5c02 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 1.1E-27 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_4159 8487f9be570c4ee27f5c1fd5e82d5c02 399 Gene3D G3DSA:3.40.50.720 1 399 1.0E-184 T 12-10-2018 YpsIP31758_3568 89f48b5c3eb2b3993a7be479dd88b97c 250 SUPERFAMILY SSF56281 1 249 2.57E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_3568 89f48b5c3eb2b3993a7be479dd88b97c 250 SMART SM00849 37 223 9.4E-5 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_3568 89f48b5c3eb2b3993a7be479dd88b97c 250 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 2.5E-130 T 12-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3568 89f48b5c3eb2b3993a7be479dd88b97c 250 Gene3D G3DSA:3.60.15.10 1 249 1.1E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_3568 89f48b5c3eb2b3993a7be479dd88b97c 250 Pfam PF12706 Beta-lactamase superfamily domain 50 220 1.7E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_3588 628759738f8ff7de2f1077aa34b9f281 103 SUPERFAMILY SSF47413 30 92 7.78E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3588 628759738f8ff7de2f1077aa34b9f281 103 SMART SM00530 39 94 7.7E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3588 628759738f8ff7de2f1077aa34b9f281 103 Pfam PF01381 Helix-turn-helix 42 91 2.9E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3588 628759738f8ff7de2f1077aa34b9f281 103 Gene3D G3DSA:1.10.260.40 11 97 4.6E-15 T 12-10-2018 YpsIP31758_2568 4e1ddc53b571790884cfef675a012e9c 261 Pfam PF13847 Methyltransferase domain 46 147 7.0E-19 T 12-10-2018 IPR025714 Methyltransferase domain YpsIP31758_2568 4e1ddc53b571790884cfef675a012e9c 261 Gene3D G3DSA:3.40.50.150 8 261 2.8E-71 T 12-10-2018 YpsIP31758_2568 4e1ddc53b571790884cfef675a012e9c 261 SUPERFAMILY SSF53335 4 255 1.53E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2568 4e1ddc53b571790884cfef675a012e9c 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 42.105 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.5E-203 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF03477 ATP cone domain 4 89 2.5E-19 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 SUPERFAMILY SSF51998 121 687 5.49E-192 T 12-10-2018 YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 Gene3D G3DSA:3.20.70.20 121 687 9.9E-231 T 12-10-2018 YpsIP31758_3556 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.5E-180 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YpsIP31758_1032 fc351bc81ac394254052a877243d2591 105 Pfam PF00034 Cytochrome c 34 104 2.7E-8 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_1032 fc351bc81ac394254052a877243d2591 105 SUPERFAMILY SSF46626 33 104 4.8E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_1032 fc351bc81ac394254052a877243d2591 105 Gene3D G3DSA:1.10.760.10 22 105 1.2E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_1032 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YpsIP31758_1032 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 Gene3D G3DSA:1.20.1220.12 411 532 8.3E-50 T 12-10-2018 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 PIRSF PIRSF001363 2 532 5.4E-249 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 Gene3D G3DSA:3.20.20.360 2 410 8.9E-195 T 12-10-2018 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 SUPERFAMILY SSF51645 11 531 9.02E-188 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 6.2E-251 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 YpsIP31758_0294 bddb1034745e73c1c1299242f56c562a 532 Pfam PF01274 Malate synthase 12 531 4.5E-207 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 Gene3D G3DSA:3.40.50.300 1 214 1.6E-79 T 12-10-2018 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.104 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF00406 Adenylate kinase 5 185 5.8E-60 T 12-10-2018 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.9E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 SUPERFAMILY SSF52540 1 212 1.67E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.2E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.2E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.2E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.2E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.2E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YpsIP31758_3054 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.0E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 YpsIP31758_1286 705bc18fcc467ebca50ddcb7080ae7de 55 Gene3D G3DSA:3.40.630.30 1 55 1.1E-8 T 12-10-2018 YpsIP31758_1286 705bc18fcc467ebca50ddcb7080ae7de 55 SUPERFAMILY SSF55729 1 45 1.22E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_2273 bfe99a46818afd4559fc18a48187ca59 220 SUPERFAMILY SSF161098 13 206 1.96E-49 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2273 bfe99a46818afd4559fc18a48187ca59 220 Gene3D G3DSA:1.10.3720.10 4 219 1.5E-61 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2273 bfe99a46818afd4559fc18a48187ca59 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.1E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2273 bfe99a46818afd4559fc18a48187ca59 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.2E-33 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 Gene3D G3DSA:3.40.50.300 19 266 3.3E-64 T 12-10-2018 YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 SMART SM00382 48 242 3.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 2.0E-117 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 SUPERFAMILY SSF52540 21 256 1.45E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1230 0353af32e1cfe51bfa06226216456b24 270 Pfam PF00005 ABC transporter 39 195 5.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2693 3cfbb74b455981b8832ef9bc143c1824 380 Gene3D G3DSA:3.90.850.10 130 359 2.1E-40 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2693 3cfbb74b455981b8832ef9bc143c1824 380 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 208 355 4.8E-9 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YpsIP31758_2693 3cfbb74b455981b8832ef9bc143c1824 380 SUPERFAMILY SSF56529 155 361 4.19E-25 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_4160 1e643f3979c9332e5d9a8ba9eef5a2da 137 Pfam PF06836 Protein of unknown function (DUF1240) 44 136 6.9E-28 T 12-10-2018 IPR010665 Protein of unknown function DUF1240 YpsIP31758_2007 945dc0dc66cae458d1a4d758598de209 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 207 1.6E-52 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YpsIP31758_2007 945dc0dc66cae458d1a4d758598de209 218 Gene3D G3DSA:3.90.850.10 1 218 7.5E-76 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2007 945dc0dc66cae458d1a4d758598de209 218 SUPERFAMILY SSF56529 11 212 3.92E-67 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 Gene3D G3DSA:3.30.420.370 142 207 1.0E-60 T 12-10-2018 YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 SUPERFAMILY SSF53067 6 144 3.56E-26 T 12-10-2018 YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 SUPERFAMILY SSF53067 147 230 7.25E-14 T 12-10-2018 YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 Pfam PF05134 Type II secretion system (T2SS), protein L 7 231 3.0E-73 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 Gene3D G3DSA:3.30.420.380 6 229 1.0E-60 T 12-10-2018 YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 Pfam PF12693 GspL periplasmic domain 238 388 3.7E-36 T 12-10-2018 IPR025691 GspL periplasmic domain YpsIP31758_0960 ea113ccf3696588a0d88ce0a33c7ffea 389 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 389 1.1E-106 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 YpsIP31758_4108 bc398616942f201f823e75ecd893cd0a 330 Pfam PF01757 Acyltransferase family 6 317 1.1E-31 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 YpsIP31758_4108 bc398616942f201f823e75ecd893cd0a 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 40.317 T 12-10-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 YpsIP31758_2635 a9314b8f761aa7c4842bbcd28a899cbd 363 Pfam PF01497 Periplasmic binding protein 83 307 1.8E-27 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_2635 a9314b8f761aa7c4842bbcd28a899cbd 363 SUPERFAMILY SSF53807 24 331 5.89E-40 T 12-10-2018 YpsIP31758_2635 a9314b8f761aa7c4842bbcd28a899cbd 363 Gene3D G3DSA:3.40.50.1980 23 360 4.9E-78 T 12-10-2018 YpsIP31758_1209 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 56 109 4.97E-15 T 12-10-2018 IPR036913 YegP-like superfamily YpsIP31758_1209 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 1.8E-23 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 YpsIP31758_1209 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 3.5E-18 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 YpsIP31758_1209 8ef116863a6e7af25c31d83e8d73f86a 112 Gene3D G3DSA:2.30.29.80 2 112 8.9E-46 T 12-10-2018 YpsIP31758_1209 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 4 60 2.88E-19 T 12-10-2018 IPR036913 YegP-like superfamily YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 2.1E-18 T 12-10-2018 IPR016188 PurM-like, N-terminal domain YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 339 5.7E-28 T 12-10-2018 IPR010918 PurM-like, C-terminal domain YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 8.5E-137 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 SUPERFAMILY SSF56042 164 339 1.5E-51 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 Gene3D G3DSA:3.30.1330.10 2 162 2.2E-47 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 PIRSF PIRSF036407 1 347 1.2E-118 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 SUPERFAMILY SSF55326 7 160 1.79E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.773 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YpsIP31758_1980 849d44f41eca42614f73e33196b7e532 348 Gene3D G3DSA:3.90.650.10 164 347 1.3E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 Pfam PF01709 Transcriptional regulator 5 236 7.6E-91 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.70.980 85 236 7.0E-58 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.2E-103 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.70.980 130 205 7.0E-58 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 SUPERFAMILY SSF75625 3 245 1.83E-94 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.727 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_2033 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:1.10.10.200 1 81 4.1E-34 T 12-10-2018 IPR017856 Integrase-like, N-terminal YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 SUPERFAMILY SSF111369 179 325 2.48E-13 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:1.10.287.470 179 206 1.3E-25 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 52.752 T 12-10-2018 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 SUPERFAMILY SSF111369 41 102 7.19E-8 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:2.40.50.100 43 77 8.4E-13 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:2.40.50.100 207 241 1.3E-25 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 292 3.7E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:2.40.30.170 242 321 1.3E-25 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:1.10.287.470 78 105 8.4E-13 T 12-10-2018 YpsIP31758_2812 b9b1fbd0d84556405d8c8d9169322a63 328 Gene3D G3DSA:1.10.287.470 108 173 3.3E-9 T 12-10-2018 YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 8.8E-229 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.1E-123 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 Pfam PF00474 Sodium:solute symporter family 35 437 3.1E-139 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2265 b0f919a79b9194d96f18494584bcadee 494 Gene3D G3DSA:1.20.1730.10 23 493 3.9E-93 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.40.10.120 39 263 2.0E-86 T 12-10-2018 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 445 1.4E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 5.8E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 269 351 1.3E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 352 449 5.1E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 264 366 6.1E-28 T 12-10-2018 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 382 456 3.55E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 7.1E-161 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13180 PDZ domain 280 360 1.0E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 367 457 5.9E-25 T 12-10-2018 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 227 352 8.54E-24 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 3.3E-33 T 12-10-2018 YpsIP31758_0456 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50494 39 261 1.6E-64 T 12-10-2018 IPR009003 Peptidase S1, PA clan YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 5.9E-99 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 SUPERFAMILY SSF51366 3 218 1.57E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.4E-93 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 Gene3D G3DSA:3.20.20.70 5 221 1.3E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3962 ef69a3553b4753b779e7a7a6afa8ff8c 225 PIRSF PIRSF001461 1 225 2.4E-107 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YpsIP31758_2231 a6f2b4c0ae29d5c056194bc6c09e7ee6 169 Gene3D G3DSA:3.90.1530.30 26 82 5.3E-7 T 12-10-2018 YpsIP31758_2231 a6f2b4c0ae29d5c056194bc6c09e7ee6 169 SUPERFAMILY SSF110849 12 138 4.36E-24 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YpsIP31758_2231 a6f2b4c0ae29d5c056194bc6c09e7ee6 169 SMART SM00470 13 99 1.4E-8 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_2231 a6f2b4c0ae29d5c056194bc6c09e7ee6 169 Pfam PF02195 ParB-like nuclease domain 17 98 3.2E-11 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Gene3D G3DSA:3.90.930.1 557 727 4.0E-12 T 12-10-2018 YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 642 678 1.6E-5 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 722 761 5.2E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 680 720 1.4E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 865 904 3.0E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 414 440 0.0016 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Gene3D G3DSA:2.60.200.60 72 159 1.3E-13 T 12-10-2018 YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Gene3D G3DSA:2.180.10.10 862 1290 1.0E-42 T 12-10-2018 YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Pfam PF05488 PAAR motif 83 149 1.5E-12 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1207 1290 2.4E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Pfam PF03527 RHS protein 1180 1216 3.5E-17 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Pfam PF05593 RHS Repeat 640 671 1.1E-6 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Pfam PF05593 RHS Repeat 662 695 6.8E-6 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0330 3c397ca22380841df1812d488862846a 1402 Pfam PF05593 RHS Repeat 865 901 4.4E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF55136 123 287 2.51E-58 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 3 55 1.2E-26 T 12-10-2018 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:3.20.80.10 122 288 1.7E-49 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 56 121 1.0E-20 T 12-10-2018 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00342 21 104 3.0E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 57 106 6.27E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 7.6E-27 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00871 126 287 6.7E-20 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding YpsIP31758_3481 dc96b61bcc514b632a7bb84919d03c34 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3759 166bd993915174e0fd6019331fec8c53 104 Gene3D G3DSA:3.30.70.100 1 97 2.7E-38 T 12-10-2018 YpsIP31758_3759 166bd993915174e0fd6019331fec8c53 104 SUPERFAMILY SSF54909 1 103 2.1E-37 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_3759 166bd993915174e0fd6019331fec8c53 104 Pfam PF05336 L-rhamnose mutarotase 3 103 3.3E-28 T 12-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 YpsIP31758_3759 166bd993915174e0fd6019331fec8c53 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 31.791 T 12-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 YpsIP31758_3759 166bd993915174e0fd6019331fec8c53 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 1.6E-56 T 12-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 YpsIP31758_3936 2e57084693774a09201c9463ee71007f 284 Gene3D G3DSA:1.10.3720.10 78 277 6.0E-30 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3936 2e57084693774a09201c9463ee71007f 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 278 2.6E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3936 2e57084693774a09201c9463ee71007f 284 SUPERFAMILY SSF161098 84 266 3.27E-36 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.1E-41 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.5E-137 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.7E-71 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 Gene3D G3DSA:3.40.50.720 4 326 1.4E-158 T 12-10-2018 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PIRSF PIRSF000149 1 331 1.1E-134 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 SUPERFAMILY SSF51735 3 166 2.48E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 SMART SM00846 3 150 6.0E-98 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 SUPERFAMILY SSF55347 149 312 4.17E-81 T 12-10-2018 YpsIP31758_1987 c3114959fcab7998e8d9746134c6817c 331 Gene3D G3DSA:3.30.360.10 149 314 1.4E-158 T 12-10-2018 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 Gene3D G3DSA:3.40.1400.10 1 149 3.8E-52 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 PIRSF PIRSF005384 2 148 2.6E-53 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 2.0E-47 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 Pfam PF02502 Ribose/Galactose Isomerase 4 142 5.7E-51 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 SUPERFAMILY SSF89623 2 146 3.01E-52 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3289 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 143 4.9E-45 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 YpsIP31758_0443 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Gene3D G3DSA:2.60.450.10 25 162 4.2E-49 T 12-10-2018 YpsIP31758_0443 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Pfam PF03968 OstA-like protein 35 146 3.7E-28 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal YpsIP31758_0443 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 25.31 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YpsIP31758_0443 b9c86a4a92e9ad0cf76b8e2063aa070c 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.6E-48 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 3 355 5.6E-170 T 12-10-2018 IPR010091 Thiazolinyl imide reductase YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 1.6E-20 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 Gene3D G3DSA:3.30.360.10 126 300 3.6E-121 T 12-10-2018 YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 Gene3D G3DSA:3.40.50.720 6 346 3.6E-121 T 12-10-2018 YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 SUPERFAMILY SSF51735 6 140 5.58E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0686 93be3535cecd1358c2d4b72cb586b8d3 375 PIRSF PIRSF017494 1 369 1.3E-143 T 12-10-2018 IPR010091 Thiazolinyl imide reductase YpsIP31758_1894 6f80aede1f5521bfa77f167c29dcd81a 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.463 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 YpsIP31758_1894 6f80aede1f5521bfa77f167c29dcd81a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.8E-60 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_1894 6f80aede1f5521bfa77f167c29dcd81a 193 PIRSF PIRSF006102 1 193 3.8E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_1894 6f80aede1f5521bfa77f167c29dcd81a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.1E-90 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 Gene3D G3DSA:1.10.287.1050 1 83 9.1E-37 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 SMART SM00528 87 135 5.0E-23 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 SUPERFAMILY SSF81273 93 135 1.14E-11 T 12-10-2018 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 SUPERFAMILY SSF81273 2 58 2.94E-18 T 12-10-2018 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 Gene3D G3DSA:4.10.430.10 91 135 5.1E-25 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 Pfam PF00816 H-NS histone family 32 127 4.3E-19 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YpsIP31758_1966 7e182e411284c5073c201b70d493c287 135 PIRSF PIRSF002096 1 135 1.6E-56 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 8.2E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 91 1.3E-30 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YpsIP31758_0040 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 Gene3D G3DSA:1.10.8.540 504 591 4.0E-13 T 12-10-2018 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 Pfam PF00771 FHIPEP family 27 689 2.2E-232 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PIRSF PIRSF005419 2 698 9.5E-217 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 12-10-2018 IPR025505 FHIPEP conserved site YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 Gene3D G3DSA:3.40.30.60 360 503 2.9E-43 T 12-10-2018 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 8.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_0622 b96d0d3d2f9450fdd8d7012d9bd06c9f 698 Gene3D G3DSA:1.10.490.80 594 697 1.7E-10 T 12-10-2018 YpsIP31758_1838 d3bd04038668629484b9ead2d7d052b5 115 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 31 94 2.0E-15 T 12-10-2018 YpsIP31758_1838 d3bd04038668629484b9ead2d7d052b5 115 SUPERFAMILY SSF55021 24 97 4.01E-16 T 12-10-2018 YpsIP31758_1838 d3bd04038668629484b9ead2d7d052b5 115 Gene3D G3DSA:3.30.70.260 17 112 7.6E-29 T 12-10-2018 YpsIP31758_1838 d3bd04038668629484b9ead2d7d052b5 115 Pfam PF13710 ACT domain 34 94 5.5E-9 T 12-10-2018 YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 195 231 9.29E-8 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 SMART SM00244 18 225 1.1E-42 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 1.9E-34 T 12-10-2018 IPR001107 Band 7 domain YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 PIRSF PIRSF005651 1 334 6.7E-106 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 6.0E-138 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 YpsIP31758_3650 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 56 156 1.44E-16 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 15 295 5.61E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 PIRSF PIRSF000429 9 436 6.9E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 9.9E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 297 435 5.43E-32 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.81 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.4E-63 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.7E-36 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 9.7E-255 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 YpsIP31758_1399 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 7 435 2.6E-117 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2869 74b27488886d158629ec878f82921c0b 388 Pfam PF06519 TolA C-terminal 293 385 7.6E-37 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 YpsIP31758_2869 74b27488886d158629ec878f82921c0b 388 TIGRFAM TIGR02794 tolA_full: protein TolA 13 387 4.0E-99 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 YpsIP31758_2869 74b27488886d158629ec878f82921c0b 388 SUPERFAMILY SSF74653 300 388 5.3E-20 T 12-10-2018 YpsIP31758_2869 74b27488886d158629ec878f82921c0b 388 Gene3D G3DSA:3.30.1150.10 310 382 1.3E-34 T 12-10-2018 YpsIP31758_1538 96772863d1bb46f11a35a5abb8e37e20 316 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 299 7.5E-104 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 YpsIP31758_1538 96772863d1bb46f11a35a5abb8e37e20 316 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 300 2.4E-127 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.326 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 Gene3D G3DSA:3.90.228.20 234 524 1.6E-237 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 SUPERFAMILY SSF53795 228 539 6.41E-129 T 12-10-2018 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 PIRSF PIRSF006294 3 539 9.3E-231 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 1.6E-285 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 7.2E-211 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 Gene3D G3DSA:3.40.449.10 22 233 1.6E-237 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 SUPERFAMILY SSF68923 8 226 3.66E-91 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YpsIP31758_3978 1d2030a92cd8942c08935715f5ed63c1 539 Gene3D G3DSA:2.170.8.10 46 349 1.6E-237 T 12-10-2018 YpsIP31758_0355 6609289849be6f00352eee7fe4209a1e 264 SUPERFAMILY SSF161098 56 237 2.09E-36 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0355 6609289849be6f00352eee7fe4209a1e 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 1.4E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0355 6609289849be6f00352eee7fe4209a1e 264 Gene3D G3DSA:1.10.3720.10 55 247 2.1E-28 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 SUPERFAMILY SSF55326 7 170 4.19E-53 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 SUPERFAMILY SSF56042 171 342 2.84E-63 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.204 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 3.8E-37 T 12-10-2018 IPR010918 PurM-like, C-terminal domain YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.7E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 Gene3D G3DSA:3.90.650.10 171 346 2.8E-70 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 Gene3D G3DSA:3.30.1330.10 6 170 5.9E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_1234 30f274ea5f8b8959db6fa5424df46404 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 7.9E-153 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 2.1E-89 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.889 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 Gene3D G3DSA:3.40.50.150 1 207 8.5E-79 T 12-10-2018 YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 3.7E-76 T 12-10-2018 YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 SUPERFAMILY SSF53335 4 204 6.75E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3295 70b7fcdb874daf9fdc402f6b3f471648 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:1.10.10.10 1 87 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF03466 LysR substrate binding domain 85 285 8.4E-39 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF53850 85 286 4.07E-37 T 12-10-2018 YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF46785 1 109 1.52E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:3.40.190.290 89 288 2.3E-33 T 12-10-2018 YpsIP31758_2472 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Gene3D G3DSA:1.10.287.130 360 460 2.0E-25 T 12-10-2018 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SUPERFAMILY SSF55874 451 614 1.7E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SUPERFAMILY SSF52172 693 814 6.97E-33 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Pfam PF00072 Response regulator receiver domain 696 809 3.0E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SUPERFAMILY SSF47226 792 901 5.5E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SUPERFAMILY SSF47384 383 464 2.75E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Gene3D G3DSA:3.30.565.10 461 617 2.6E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Gene3D G3DSA:1.20.120.160 832 919 1.8E-5 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 614 5.1E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SMART SM00448 694 809 8.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 462 9.2E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Pfam PF01627 Hpt domain 848 913 6.2E-6 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SMART SM00387 509 616 1.5E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 SMART SM00388 397 462 1.0E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_3832 3549918e01e23b4c67bbd25504063a4e 939 Gene3D G3DSA:3.40.50.2300 689 815 1.0E-33 T 12-10-2018 YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Pfam PF01580 FtsK/SpoIIIE family 928 1141 4.6E-72 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Pfam PF09397 Ftsk gamma domain 1245 1305 1.0E-26 T 12-10-2018 IPR018541 FtsK gamma domain YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 SMART SM00843 1243 1308 1.1E-40 T 12-10-2018 IPR018541 FtsK gamma domain YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Gene3D G3DSA:3.40.50.300 925 1227 1.6E-123 T 12-10-2018 YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Gene3D G3DSA:1.10.10.10 1247 1310 4.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 7.6E-44 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 SUPERFAMILY SSF52540 902 1214 7.44E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 SUPERFAMILY SSF46785 1243 1308 2.18E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2596 bee2f393fbcdddbab71522d844323ed0 1310 Gene3D G3DSA:3.30.980.40 820 924 4.8E-34 T 12-10-2018 YpsIP31758_1800 0000a99d2fd68a3c5cc4e460a92cc034 279 Gene3D G3DSA:1.10.1660.10 1 124 9.9E-19 T 12-10-2018 YpsIP31758_1800 0000a99d2fd68a3c5cc4e460a92cc034 279 Pfam PF13411 MerR HTH family regulatory protein 2 67 3.4E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1800 0000a99d2fd68a3c5cc4e460a92cc034 279 SUPERFAMILY SSF46955 1 103 3.39E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_1800 0000a99d2fd68a3c5cc4e460a92cc034 279 SMART SM00422 2 70 1.6E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3931 370acf5b640b511b2aa7ff31a48591ed 182 SUPERFAMILY SSF52218 5 176 3.03E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3931 370acf5b640b511b2aa7ff31a48591ed 182 Pfam PF02525 Flavodoxin-like fold 6 173 1.1E-39 T 12-10-2018 IPR003680 Flavodoxin-like fold YpsIP31758_3931 370acf5b640b511b2aa7ff31a48591ed 182 Gene3D G3DSA:3.40.50.360 6 178 2.9E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3931 370acf5b640b511b2aa7ff31a48591ed 182 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 49.76 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.5E-262 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.674 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.140.20 218 374 2.0E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 SMART SM00798 137 461 2.3E-218 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.140.20 392 529 2.5E-57 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 4.2E-120 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 SMART SM00851 19 132 7.0E-62 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 SUPERFAMILY SSF52335 7 196 1.57E-71 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Pfam PF02142 MGS-like domain 19 132 2.9E-29 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 SUPERFAMILY SSF53927 221 529 2.41E-129 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 PIRSF PIRSF000414 1 529 7.3E-227 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_3843 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.50.1380 1 200 4.3E-86 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_3005 b8794ba45f25d6a802b8512c8b2fed9f 309 Pfam PF01148 Cytidylyltransferase family 43 307 2.8E-63 T 12-10-2018 YpsIP31758_3005 b8794ba45f25d6a802b8512c8b2fed9f 309 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 265 291 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 YpsIP31758_0236 13e373c4376a9f46072abdc975ed5a96 139 Gene3D G3DSA:2.40.50.660 35 97 1.7E-13 T 12-10-2018 YpsIP31758_0236 13e373c4376a9f46072abdc975ed5a96 139 Gene3D G3DSA:2.40.50.660 98 139 2.2E-8 T 12-10-2018 YpsIP31758_0236 13e373c4376a9f46072abdc975ed5a96 139 Pfam PF10694 Protein of unknown function (DUF2500) 5 132 3.2E-40 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 YpsIP31758_0782 68a79e1dfde1907d9a32c499ecb22fec 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.8E-48 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_0782 68a79e1dfde1907d9a32c499ecb22fec 163 Gene3D G3DSA:2.30.110.20 1 163 7.2E-79 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0782 68a79e1dfde1907d9a32c499ecb22fec 163 SUPERFAMILY SSF141452 2 160 1.05E-42 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0782 68a79e1dfde1907d9a32c499ecb22fec 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 4.9E-35 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_3325 5f2c0311489429bda84b944e862af71e 233 Gene3D G3DSA:3.40.50.1580 1 232 6.7E-67 T 12-10-2018 YpsIP31758_3325 5f2c0311489429bda84b944e862af71e 233 Pfam PF01048 Phosphorylase superfamily 2 226 1.5E-45 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YpsIP31758_3325 5f2c0311489429bda84b944e862af71e 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.74 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3325 5f2c0311489429bda84b944e862af71e 233 SUPERFAMILY SSF53167 1 229 2.75E-73 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YpsIP31758_3325 5f2c0311489429bda84b944e862af71e 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.6E-113 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YpsIP31758_3613 90575a40710e47f704875be878136b3a 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site YpsIP31758_3613 90575a40710e47f704875be878136b3a 323 SUPERFAMILY SSF48576 6 322 2.59E-97 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily YpsIP31758_3613 90575a40710e47f704875be878136b3a 323 Gene3D G3DSA:1.10.600.10 1 322 8.3E-121 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily YpsIP31758_3613 90575a40710e47f704875be878136b3a 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site YpsIP31758_3613 90575a40710e47f704875be878136b3a 323 Pfam PF00348 Polyprenyl synthetase 32 263 2.3E-76 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 YpsIP31758_2124 ae9751440d88d1456a579271f9a3770b 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 364 7.7E-103 T 12-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_2124 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 42 192 4.7E-13 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YpsIP31758_2124 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 223 363 1.1E-7 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 SUPERFAMILY SSF46548 13 88 2.09E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 Gene3D G3DSA:1.10.1060.10 3 99 4.3E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 10 414 3.3E-231 T 12-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 Pfam PF13183 4Fe-4S dicluster domain 13 77 8.8E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 Pfam PF02754 Cysteine-rich domain 312 395 1.3E-13 T 12-10-2018 IPR004017 Cysteine-rich domain YpsIP31758_0229 faf33a3e5590f636e857f0d4d344d1ad 415 Pfam PF02754 Cysteine-rich domain 170 256 4.3E-14 T 12-10-2018 IPR004017 Cysteine-rich domain YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04545 Sigma-70, region 4 185 234 2.7E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04539 Sigma-70 region 3 97 163 7.6E-13 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88659 90 162 4.19E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.193 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Pfam PF04542 Sigma-70 region 2 16 88 2.7E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88946 5 88 2.2E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PIRSF PIRSF000770 3 240 3.6E-40 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Gene3D G3DSA:1.10.1740.10 4 85 4.3E-27 T 12-10-2018 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 Gene3D G3DSA:1.20.140.160 87 239 5.4E-45 T 12-10-2018 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 8.5E-84 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 2.3E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_2280 75c3068bd574fa8fc1e39afa4cb0d7f3 240 SUPERFAMILY SSF88659 150 238 2.62E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_1536 33c1d2fa2fcb1983ac1161119f1d3813 1095 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1091 0.0 T 12-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YpsIP31758_1536 33c1d2fa2fcb1983ac1161119f1d3813 1095 Gene3D G3DSA:1.10.3210.30 88 220 2.8E-9 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily YpsIP31758_1536 33c1d2fa2fcb1983ac1161119f1d3813 1095 SUPERFAMILY SSF52540 430 872 1.65E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0047 5eb71df54e86a1220651c69646d12f1c 366 SUPERFAMILY SSF52540 68 354 1.03E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0047 5eb71df54e86a1220651c69646d12f1c 366 Pfam PF00437 Type II/IV secretion system protein 76 341 2.7E-73 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_A0047 5eb71df54e86a1220651c69646d12f1c 366 Gene3D G3DSA:3.30.450.90 66 168 3.4E-11 T 12-10-2018 YpsIP31758_A0047 5eb71df54e86a1220651c69646d12f1c 366 Gene3D G3DSA:3.40.50.300 169 365 8.4E-53 T 12-10-2018 YpsIP31758_A0047 5eb71df54e86a1220651c69646d12f1c 366 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 60 363 4.5E-135 T 12-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.724 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.4E-184 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 2.5E-94 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PIRSF PIRSF001555 1 329 4.2E-156 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 SUPERFAMILY SSF55681 5 328 7.46E-99 T 12-10-2018 YpsIP31758_0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Gene3D G3DSA:3.30.930.10 1 330 4.3E-144 T 12-10-2018 YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:3.30.420.40 209 377 1.1E-89 T 12-10-2018 YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:3.30.420.40 92 382 1.1E-89 T 12-10-2018 YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 Pfam PF00480 ROK family 96 389 1.8E-49 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 SUPERFAMILY SSF53067 88 394 4.51E-43 T 12-10-2018 YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:1.10.10.10 1 82 5.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1869 e091f453d629023d18ff32bc28ec49e1 405 SUPERFAMILY SSF46785 12 77 1.23E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 SUPERFAMILY SSF55804 714 853 8.24E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Pfam PF00391 PEP-utilising enzyme, mobile domain 290 362 2.0E-13 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Gene3D G3DSA:3.20.20.60 372 706 2.0E-102 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Pfam PF05524 PEP-utilising enzyme, N-terminal 122 262 5.4E-11 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Gene3D G3DSA:3.50.30.10 124 365 2.0E-36 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Pfam PF00381 PTS HPr component phosphorylation site 5 85 2.5E-13 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 584 602 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Gene3D G3DSA:3.40.930.10 712 855 1.2E-31 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 183 702 3.8E-137 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 SUPERFAMILY SSF51621 389 685 1.31E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 SUPERFAMILY SSF55594 4 88 3.14E-17 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 388 678 6.4E-101 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Gene3D G3DSA:1.10.274.10 138 282 2.0E-36 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 649 3.4E-21 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 584 599 3.4E-21 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 601 616 3.4E-21 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 430 449 3.4E-21 T 12-10-2018 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 SUPERFAMILY SSF47831 187 279 4.45E-14 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 321 332 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 SUPERFAMILY SSF52009 261 379 2.35E-21 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR00107 Phosphocarrier protein signature 14 30 8.0E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR00107 Phosphocarrier protein signature 41 56 8.0E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 PRINTS PR00107 Phosphocarrier protein signature 56 73 8.0E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 717 854 2.3E-30 T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_3528 1feeaacdcef8a55eb9ea8a9c991652b3 858 Gene3D G3DSA:3.30.1340.10 3 88 1.9E-13 T 12-10-2018 IPR035895 HPr-like superfamily YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 SUPERFAMILY SSF143800 1 66 3.65E-26 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.3E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.3E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.2E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 Gene3D G3DSA:2.30.170.50 1 70 1.9E-32 T 12-10-2018 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 Pfam PF01197 Ribosomal protein L31 1 64 4.4E-29 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0118 20b23a19f8ee5acc41d588eb597a09de 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.069 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_1196 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.30.300.10 406 525 1.2E-51 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.7E-44 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YpsIP31758_1196 a388fde768159065350341798453419e 525 Pfam PF02540 NAD synthase 223 254 6.6E-6 T 12-10-2018 IPR022310 NAD/GMP synthase YpsIP31758_1196 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.40.50.880 9 206 9.6E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1196 a388fde768159065350341798453419e 525 SUPERFAMILY SSF52317 4 204 1.1E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_1196 a388fde768159065350341798453419e 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.606 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 10 24 4.4E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 4.4E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.4E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 SUPERFAMILY SSF52402 197 420 1.01E-55 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.5E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.5E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.5E-6 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 SUPERFAMILY SSF54810 405 525 1.57E-51 T 12-10-2018 YpsIP31758_1196 a388fde768159065350341798453419e 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.8E-154 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YpsIP31758_1196 a388fde768159065350341798453419e 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 4.4E-38 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_1196 a388fde768159065350341798453419e 525 Gene3D G3DSA:3.40.50.620 209 405 1.0E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1196 a388fde768159065350341798453419e 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.7E-80 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YpsIP31758_0258 61346d1e2643c3da3d18fac8b0e88ee6 281 Gene3D G3DSA:1.10.3720.10 2 274 1.3E-53 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0258 61346d1e2643c3da3d18fac8b0e88ee6 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 3.1E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0258 61346d1e2643c3da3d18fac8b0e88ee6 281 SUPERFAMILY SSF161098 4 277 1.15E-58 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:1.20.5.100 205 236 7.7E-19 T 12-10-2018 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 7.9E-32 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 237 447 5.4E-79 T 12-10-2018 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 SMART SM00984 322 426 1.0E-52 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 1.8E-62 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 1.6E-38 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 1 204 2.0E-74 T 12-10-2018 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF48179 205 302 1.43E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF51735 1 197 5.26E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF52413 312 437 3.27E-40 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF500134 1 444 4.2E-187 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 1.4E-136 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1968 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF000124 1 441 3.2E-146 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 YpsIP31758_1151 48a9110c4f4d5b8398ed31a66829bcee 350 Pfam PF13942 YfhG lipoprotein 68 241 1.8E-78 T 12-10-2018 IPR025262 Quorum-sensing regulator protein G YpsIP31758_1151 48a9110c4f4d5b8398ed31a66829bcee 350 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 25 243 2.0E-119 T 12-10-2018 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF51206 8 136 1.23E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00419 160 208 4.5E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00100 2 122 1.1E-26 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3945 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:2.60.120.10 10 138 6.9E-45 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_0412 7170fdae7f2950db059391b8bdd31b14 133 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 127 1.6E-16 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 YpsIP31758_0412 7170fdae7f2950db059391b8bdd31b14 133 Gene3D G3DSA:3.30.1380.10 8 127 4.6E-22 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_0412 7170fdae7f2950db059391b8bdd31b14 133 SUPERFAMILY SSF55166 3 129 4.19E-29 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.40.190.10 103 192 1.8E-73 T 12-10-2018 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 4.9E-48 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF53850 6 224 1.78E-70 T 12-10-2018 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 298 9.5E-33 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.725 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.40.190.10 7 221 1.8E-73 T 12-10-2018 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.1E-56 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF54913 226 298 1.56E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.5E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YpsIP31758_2428 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.30.70.120 226 299 6.9E-35 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 SUPERFAMILY SSF52440 3 112 2.88E-35 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 391 51.473 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 Gene3D G3DSA:3.40.50.20 2 122 4.9E-53 T 12-10-2018 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 Gene3D G3DSA:3.30.1490.20 123 196 6.1E-31 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 SUPERFAMILY SSF56059 113 314 8.31E-55 T 12-10-2018 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 2.8E-186 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 Pfam PF02222 ATP-grasp domain 123 295 3.1E-55 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 Gene3D G3DSA:3.30.470.20 197 390 3.2E-58 T 12-10-2018 YpsIP31758_2351 e1655ead68177dd9d1aed7ef97bce23c 393 SUPERFAMILY SSF51246 319 391 1.73E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:3.40.50.300 72 379 1.4E-118 T 12-10-2018 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.4E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF52540 10 277 1.86E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 6.1E-13 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 162 1.2E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:3.40.50.300 110 275 1.4E-118 T 12-10-2018 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.227 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF50447 262 393 9.94E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 SUPERFAMILY SSF54980 393 468 4.32E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Gene3D G3DSA:3.30.70.3280 390 529 8.7E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily YpsIP31758_3504 5dd84a083c206215019f92dc7b7406cb 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.3E-45 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 27.161 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 4.1E-52 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 Gene3D G3DSA:3.30.70.3270 33 176 4.9E-43 T 12-10-2018 YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 SUPERFAMILY SSF54862 33 156 4.06E-29 T 12-10-2018 YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_1461 4cae8759424fe3d9adb72cf71209af88 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 4.7E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1752 e16837be7431cdd9959a17109a6c478f 383 Gene3D G3DSA:3.40.50.150 117 376 6.2E-99 T 12-10-2018 YpsIP31758_1752 e16837be7431cdd9959a17109a6c478f 383 PIRSF PIRSF003085 6 379 2.7E-124 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 YpsIP31758_1752 e16837be7431cdd9959a17109a6c478f 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 4.4E-101 T 12-10-2018 YpsIP31758_1752 e16837be7431cdd9959a17109a6c478f 383 SUPERFAMILY SSF53335 117 370 1.62E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-47 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Gene3D G3DSA:3.30.70.140 1 100 1.3E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 150 2.7E-64 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.336 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 147 1.3E-18 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 SUPERFAMILY SSF57825 102 149 1.44E-14 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Gene3D G3DSA:2.30.30.20 101 153 6.3E-25 T 12-10-2018 YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 SUPERFAMILY SSF54893 2 100 1.02E-34 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YpsIP31758_0435 ea8d25759d9a2fe3afd5d7f0fcb88e5d 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.2E-29 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YpsIP31758_3803 578c28c49bfbe5f51698b7dc481ba795 279 Gene3D G3DSA:3.40.50.1980 147 279 6.0E-54 T 12-10-2018 YpsIP31758_3803 578c28c49bfbe5f51698b7dc481ba795 279 Gene3D G3DSA:3.40.50.1980 25 146 2.0E-44 T 12-10-2018 YpsIP31758_3803 578c28c49bfbe5f51698b7dc481ba795 279 SUPERFAMILY SSF53807 26 274 3.1E-49 T 12-10-2018 YpsIP31758_3803 578c28c49bfbe5f51698b7dc481ba795 279 Pfam PF01497 Periplasmic binding protein 29 253 7.5E-32 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 PIRSF PIRSF001455 11 359 4.2E-105 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:1.20.1090.10 173 361 1.4E-64 T 12-10-2018 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 361 74.061 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 SUPERFAMILY SSF56796 4 357 1.7E-115 T 12-10-2018 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 Pfam PF01761 3-dehydroquinate synthase 67 326 1.2E-108 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:3.40.50.1970 1 172 3.2E-64 T 12-10-2018 YpsIP31758_3965 641701b6900493686a5790cade6a71a4 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 2.0E-119 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.062 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 PIRSF PIRSF001423 2 561 3.2E-293 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Pfam PF17392 Urocanase C-terminal domain 352 546 2.3E-92 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.1770.10 17 542 2.0E-260 T 12-10-2018 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Pfam PF01175 Urocanase Rossmann-like domain 141 349 6.3E-85 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 SUPERFAMILY SSF111326 7 555 7.72E-261 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Pfam PF17391 Urocanase N-terminal domain 12 138 3.2E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.50.10730 142 349 2.0E-260 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4086 688f6cd344bd209d759e0a683615626f 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 2.6E-303 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 PIRSF PIRSF002741 5 538 2.3E-112 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 SUPERFAMILY SSF53850 32 526 4.6E-140 T 12-10-2018 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 453 1.8E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 Gene3D G3DSA:3.10.105.10 292 507 4.9E-189 T 12-10-2018 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 Gene3D G3DSA:3.90.76.10 67 190 4.9E-189 T 12-10-2018 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 Gene3D G3DSA:3.40.190.10 41 519 4.9E-189 T 12-10-2018 YpsIP31758_1798 eb973dd6f1872e944b92081e4b43e91d 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site YpsIP31758_3661 6a20505a87465596b84c8c299ba66c75 181 SUPERFAMILY SSF53098 4 179 8.04E-47 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_3661 6a20505a87465596b84c8c299ba66c75 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.454 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 YpsIP31758_3661 6a20505a87465596b84c8c299ba66c75 181 SMART SM00479 7 180 2.3E-20 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_3661 6a20505a87465596b84c8c299ba66c75 181 Gene3D G3DSA:3.30.420.10 1 181 1.6E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_3661 6a20505a87465596b84c8c299ba66c75 181 Pfam PF00929 Exonuclease 9 170 2.1E-34 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 SUPERFAMILY SSF51905 1 374 3.89E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 Gene3D G3DSA:1.10.8.870 391 460 2.9E-27 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 492 2.1E-12 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 Gene3D G3DSA:3.30.9.10 82 320 2.6E-145 T 12-10-2018 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 SUPERFAMILY SSF54373 226 319 2.16E-7 T 12-10-2018 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 Gene3D G3DSA:3.50.50.60 5 366 2.6E-145 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 8.3E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_4000 960103021f3f63751eaf5e640cafa08b 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 SUPERFAMILY SSF52540 4 224 1.7E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 SUPERFAMILY SSF52540 278 494 1.21E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 Pfam PF00005 ABC transporter 282 437 7.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 Gene3D G3DSA:3.40.50.300 268 512 1.1E-43 T 12-10-2018 YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 Gene3D G3DSA:3.40.50.300 1 237 8.4E-55 T 12-10-2018 YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 SMART SM00382 291 497 3.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 SMART SM00382 30 251 1.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2972 15beefd242c869893ed1f0df44920534 515 Pfam PF00005 ABC transporter 21 172 2.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0870 2e4b837908402d398794323c9fe6ded8 233 Pfam PF03006 Haemolysin-III related 29 226 3.8E-38 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YpsIP31758_0870 2e4b837908402d398794323c9fe6ded8 233 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 32 233 4.6E-71 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 YpsIP31758_1848 25c8a327f2b27dcea5dfbf051d0a830e 273 SUPERFAMILY SSF161098 71 259 1.7E-35 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1848 25c8a327f2b27dcea5dfbf051d0a830e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 264 4.2E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1848 25c8a327f2b27dcea5dfbf051d0a830e 273 Gene3D G3DSA:1.10.3720.10 71 266 5.8E-30 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1085 3705a1dacd241c7a8bd88aafc2e1d32a 352 Pfam PF03824 High-affinity nickel-transport protein 48 337 6.2E-91 T 12-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YpsIP31758_1085 3705a1dacd241c7a8bd88aafc2e1d32a 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 2.2E-126 T 12-10-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 SUPERFAMILY SSF46785 19 88 1.51E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 Gene3D G3DSA:3.40.1410.10 103 238 1.3E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 8.3E-108 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 SMART SM00866 105 242 1.6E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 Pfam PF07702 UTRA domain 105 242 1.5E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 SMART SM00345 25 84 2.1E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 Gene3D G3DSA:1.10.10.10 19 88 3.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.3E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_2112 6b6d2dd154abef723dee76cf50f47915 255 SUPERFAMILY SSF64288 72 248 7.38E-44 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.40.1010.10 2 120 8.7E-47 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.30.950.10 121 241 5.6E-42 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 SUPERFAMILY SSF53790 13 232 3.79E-83 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 5.7E-26 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 PIRSF PIRSF005917 2 288 7.6E-107 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.28 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YpsIP31758_0476 911bebb9c04da28bcb1be81005777f26 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-110 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YpsIP31758_0826 d3e977a6caa7ab8966dde28b0aef9f7e 197 Pfam PF01725 Ham1 family 4 192 5.5E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 YpsIP31758_0826 d3e977a6caa7ab8966dde28b0aef9f7e 197 SUPERFAMILY SSF52972 1 195 4.97E-75 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_0826 d3e977a6caa7ab8966dde28b0aef9f7e 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.603 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 YpsIP31758_0826 d3e977a6caa7ab8966dde28b0aef9f7e 197 Gene3D G3DSA:3.90.950.10 1 197 5.5E-84 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YpsIP31758_0826 d3e977a6caa7ab8966dde28b0aef9f7e 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.0E-67 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 YpsIP31758_1367 6bdef33c6aa0d5b1946e5f96669a913f 174 PIRSF PIRSF028301 2 174 7.5E-61 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_1367 6bdef33c6aa0d5b1946e5f96669a913f 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.6E-59 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_1367 6bdef33c6aa0d5b1946e5f96669a913f 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 2.1E-57 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_2306 2a9fdf3894ef2726908cef0a1f9cce2d 319 Gene3D G3DSA:3.40.1190.20 2 312 5.3E-70 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2306 2a9fdf3894ef2726908cef0a1f9cce2d 319 Pfam PF00294 pfkB family carbohydrate kinase 1 294 1.9E-52 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_2306 2a9fdf3894ef2726908cef0a1f9cce2d 319 SUPERFAMILY SSF53613 1 302 5.46E-69 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 Gene3D G3DSA:2.40.180.10 2 479 1.0E-232 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 21 44 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 321 347 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 105 122 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 289 316 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 124 142 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PRINTS PR00067 Catalase signature 84 102 1.1E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 SUPERFAMILY SSF56634 4 478 1.16E-210 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 PIRSF PIRSF038928 1 479 5.9E-220 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 Pfam PF06628 Catalase-related immune-responsive 416 476 2.8E-21 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 SMART SM01060 8 392 4.3E-281 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_2776 8966ee5ea9c8a3ce1c25a83757c54921 479 Pfam PF00199 Catalase 8 388 2.5E-187 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YpsIP31758_1322 78446c0bd2c148ec8aa68cd5dfe374bd 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.9E-31 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor YpsIP31758_1322 78446c0bd2c148ec8aa68cd5dfe374bd 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 6.0E-25 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor YpsIP31758_2642 1c293fae4d8890a9aaf5570ae7c1ce2c 281 SUPERFAMILY SSF161098 8 266 5.7E-52 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2642 1c293fae4d8890a9aaf5570ae7c1ce2c 281 Gene3D G3DSA:1.10.3720.10 16 270 5.8E-46 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2642 1c293fae4d8890a9aaf5570ae7c1ce2c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 268 4.2E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 SUPERFAMILY SSF51445 182 653 5.49E-77 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 Pfam PF00128 Alpha amylase, catalytic domain 228 606 1.4E-39 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 Gene3D G3DSA:3.20.20.80 184 401 5.6E-47 T 12-10-2018 YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 SMART SM00642 195 647 2.2E-81 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 Gene3D G3DSA:3.20.20.80 433 654 5.0E-35 T 12-10-2018 YpsIP31758_4138 9be0a2bfdeca429c3c7bbf3f5dcb08e1 687 PIRSF PIRSF036917 1 686 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 YpsIP31758_3573 0d1ca9dc8a68369b91241bc8c8672b70 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 8.4E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3573 0d1ca9dc8a68369b91241bc8c8672b70 279 Gene3D G3DSA:1.10.3720.10 1 270 4.6E-61 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3573 0d1ca9dc8a68369b91241bc8c8672b70 279 SUPERFAMILY SSF161098 3 279 3.74E-66 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3703 5a394038c27d7c10d21e476183093eb2 710 Gene3D G3DSA:3.40.50.300 308 559 2.2E-8 T 12-10-2018 YpsIP31758_3703 5a394038c27d7c10d21e476183093eb2 710 SUPERFAMILY SSF52540 2 555 1.71E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3703 5a394038c27d7c10d21e476183093eb2 710 Pfam PF13166 AAA domain 10 692 1.9E-105 T 12-10-2018 IPR026866 Protein CR006, P-loop domain YpsIP31758_2424 7cbc3d046d43f34a6f88988ea12a8601 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 9.9E-38 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-22 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 SUPERFAMILY SSF46561 1 61 1.57E-21 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 Gene3D G3DSA:1.10.287.310 1 63 4.3E-30 T 12-10-2018 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.9E-22 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3907 1810ac9ab15ee2565f51d440023e927c 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.616 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 SMART SM00382 161 312 6.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 5.9E-244 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF52172 6 186 2.56E-47 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 SMART SM00448 4 115 8.5E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF00072 Response regulator receiver domain 6 115 6.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Pfam PF00158 Sigma-54 interaction domain 141 307 1.9E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-45 T 12-10-2018 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF52540 140 384 1.18E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 SUPERFAMILY SSF46689 381 470 2.01E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:1.10.8.60 312 378 3.6E-19 T 12-10-2018 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:1.10.10.60 380 470 1.7E-28 T 12-10-2018 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0025 ee4e6e23b6c7dd1c722463e812feb201 470 Gene3D G3DSA:3.40.50.300 129 311 2.2E-65 T 12-10-2018 YpsIP31758_3987 d0346e7fedfbc017499471a4b06034e8 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 3.3E-21 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_3987 d0346e7fedfbc017499471a4b06034e8 89 SUPERFAMILY SSF159871 3 89 2.35E-24 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_3987 d0346e7fedfbc017499471a4b06034e8 89 Gene3D G3DSA:3.30.1660.10 26 89 7.9E-26 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 16 169 5.76E-21 T 12-10-2018 YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 21 85 7.0E-8 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 210 276 2.2E-11 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF00805 Pentapeptide repeats (8 copies) 291 321 0.0029 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.100 13 175 5.7E-23 T 12-10-2018 YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 157 325 7.26E-35 T 12-10-2018 YpsIP31758_3427 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.100 176 330 2.5E-29 T 12-10-2018 YpsIP31758_3473 b56d049c51564f02418a24f9fe948a1f 258 Pfam PF03883 Peroxide stress protein YaaA 1 242 3.4E-93 T 12-10-2018 IPR005583 Peroxide stress protein YaaA YpsIP31758_3473 b56d049c51564f02418a24f9fe948a1f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.486 T 12-10-2018 IPR005583 Peroxide stress protein YaaA YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.423 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 Gene3D G3DSA:3.40.50.300 1 212 5.1E-71 T 12-10-2018 YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 SUPERFAMILY SSF52540 76 359 1.17E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 SMART SM00490 262 343 9.9E-27 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.5E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 SMART SM00487 23 225 5.6E-58 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YpsIP31758_1126 4c87e023162103e34f1658f3b3715121 441 Gene3D G3DSA:3.40.50.300 219 388 3.1E-48 T 12-10-2018 YpsIP31758_3116 8302d6af3ff593e682b6e7f59ab412bb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.1E-58 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_3116 8302d6af3ff593e682b6e7f59ab412bb 156 Gene3D G3DSA:3.40.50.960 1 156 6.2E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_3116 8302d6af3ff593e682b6e7f59ab412bb 156 SUPERFAMILY SSF52121 3 154 3.53E-60 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_3116 8302d6af3ff593e682b6e7f59ab412bb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.894 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_3116 8302d6af3ff593e682b6e7f59ab412bb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.1E-55 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 SUPERFAMILY SSF102114 5 313 5.49E-95 T 12-10-2018 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 SMART SM00876 220 312 6.5E-48 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 PIRSF PIRSF001619 1 319 6.4E-139 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.799 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 SMART SM00729 43 255 8.9E-42 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.9E-125 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.8E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 Gene3D G3DSA:3.20.20.70 4 315 9.9E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2844 ba984aebec81bc076692eeb105bd4e7a 345 Pfam PF04055 Radical SAM superfamily 50 202 5.6E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54768 9 75 4.08E-23 T 12-10-2018 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.8E-70 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.230.10 74 167 1.3E-38 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.160.20 1 73 2.3E-33 T 12-10-2018 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.65 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.8E-28 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3897 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3876 09648645fd6123e48e3aa04169044d8e 180 SUPERFAMILY SSF51161 3 175 1.66E-46 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_3876 09648645fd6123e48e3aa04169044d8e 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 8.7E-6 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_3876 09648645fd6123e48e3aa04169044d8e 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 2.1E-8 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_3876 09648645fd6123e48e3aa04169044d8e 180 Gene3D G3DSA:2.160.10.10 1 180 4.0E-56 T 12-10-2018 YpsIP31758_2372 e670695b952b66b10ad4b4a2a1f0d6c7 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.828 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP YpsIP31758_2372 e670695b952b66b10ad4b4a2a1f0d6c7 189 Pfam PF02659 Putative manganese efflux pump 31 181 1.1E-55 T 12-10-2018 IPR003810 Putative manganese efflux pump YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 115 186 0.18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 211 280 5.1E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 126 220 9.1E-34 T 12-10-2018 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 221 310 2.2E-20 T 12-10-2018 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 86 186 1.25E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF02163 Peptidase family M50 10 439 4.9E-88 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 5.7E-160 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 195 290 2.5E-16 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_1020 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 223 272 3.9E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 PIRSF PIRSF006755 1 230 4.8E-83 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 9.2E-60 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 Gene3D G3DSA:3.40.50.300 2 230 2.8E-69 T 12-10-2018 YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 Pfam PF13500 AAA domain 5 211 2.2E-35 T 12-10-2018 YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 SUPERFAMILY SSF52540 3 213 1.65E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2841 9df6037b11f7e36863e0081322f74051 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 29.742 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 315 1.6E-105 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 SMART SM00363 18 83 1.5E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 Gene3D G3DSA:3.10.290.10 2 76 9.7E-26 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 SUPERFAMILY SSF55120 77 323 2.26E-77 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 Gene3D G3DSA:3.30.2350.10 85 318 9.6E-70 T 12-10-2018 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 SUPERFAMILY SSF55174 17 69 1.5E-11 T 12-10-2018 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 Pfam PF01479 S4 domain 18 65 1.0E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3214 7dd544013886ed187e9843baceb550ad 327 Pfam PF00849 RNA pseudouridylate synthase 92 244 1.5E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-48 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1370.30 2 72 1.0E-27 T 12-10-2018 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1490.10 73 130 1.4E-25 T 12-10-2018 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 SUPERFAMILY SSF56047 5 129 2.09E-46 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3900 211d9feed7e2d2f269ca9fd76d452cb0 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.795 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1434 057ebfca7dcd4f34525ab2e4cfaa8361 183 Gene3D G3DSA:3.60.21.10 1 183 1.3E-67 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_1434 057ebfca7dcd4f34525ab2e4cfaa8361 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 9.5E-38 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 YpsIP31758_1434 057ebfca7dcd4f34525ab2e4cfaa8361 183 SUPERFAMILY SSF56300 1 174 2.06E-36 T 12-10-2018 YpsIP31758_1434 057ebfca7dcd4f34525ab2e4cfaa8361 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 1.8E-22 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 YpsIP31758_1434 057ebfca7dcd4f34525ab2e4cfaa8361 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 12-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 Gene3D G3DSA:3.30.420.40 96 190 5.2E-83 T 12-10-2018 YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 Gene3D G3DSA:3.30.420.40 5 224 5.2E-83 T 12-10-2018 YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 Pfam PF00814 Glycoprotease family 30 133 1.6E-28 T 12-10-2018 IPR000905 Gcp-like domain YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 SUPERFAMILY SSF53067 5 107 3.88E-30 T 12-10-2018 YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.7E-67 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 YpsIP31758_2016 195d09994056e56aa2dcb554630d7ae3 232 SUPERFAMILY SSF53067 110 219 4.14E-28 T 12-10-2018 YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:1.10.510.10 60 258 6.4E-124 T 12-10-2018 YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:1.20.1270.170 149 307 6.4E-124 T 12-10-2018 YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 Pfam PF01636 Phosphotransferase enzyme family 33 256 2.4E-46 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.178 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:3.30.200.70 13 108 6.4E-124 T 12-10-2018 YpsIP31758_0019 de3cbfafce235944bb90a6e7d18fa870 328 SUPERFAMILY SSF56112 6 327 6.85E-90 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 1.0E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.7E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 9.1E-15 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.5E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.8E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.4E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 SMART SM00434 11 499 1.2E-300 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.695 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 SUPERFAMILY SSF56719 30 521 9.02E-183 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Gene3D G3DSA:2.120.10.90 535 841 1.1E-131 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 12-10-2018 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 SUPERFAMILY SSF101904 533 848 1.83E-114 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.8E-152 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Gene3D G3DSA:3.30.1360.40 236 333 9.9E-235 T 12-10-2018 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Gene3D G3DSA:1.10.268.10 370 493 9.9E-235 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_2767 ddca06683f02f2cc8f12ee58a7021989 897 Gene3D G3DSA:3.90.199.10 33 521 9.9E-235 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0940 b5e75c73ffe2f03c2f38a9536e5d84ba 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 153 4.7E-51 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YpsIP31758_0940 b5e75c73ffe2f03c2f38a9536e5d84ba 165 SUPERFAMILY SSF52728 5 162 8.63E-47 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 YpsIP31758_0940 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 1.7E-47 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YpsIP31758_0940 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Gene3D G3DSA:3.40.35.10 1 164 2.8E-48 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 YpsIP31758_2264 75ece4671439c63e2a839102fefceb33 282 Pfam PF03239 Iron permease FTR1 family 1 259 1.8E-68 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Gene3D G3DSA:1.20.120.960 39 145 2.5E-38 T 12-10-2018 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 586 2.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 PIRSF PIRSF003167 1 593 2.5E-200 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 115 1.1E-6 T 12-10-2018 IPR029095 NarX-like, N-terminal YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Gene3D G3DSA:3.30.565.10 456 591 2.6E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Pfam PF00672 HAMP domain 173 221 2.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 SUPERFAMILY SSF55874 464 585 2.75E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Pfam PF07730 Histidine kinase 392 455 7.2E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 SUPERFAMILY SSF158472 173 221 4.32E-8 T 12-10-2018 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 Gene3D G3DSA:1.10.287.130 171 284 6.7E-7 T 12-10-2018 YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 SMART SM00387 496 589 8.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_2123 95ca498099dc3c7a2302296dd8441a37 593 SMART SM00304 173 226 9.0E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 SUPERFAMILY SSF51126 3607 4067 2.23E-46 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 3959 4391 8.7E-127 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 Pfam PF13018 Extended Signal Peptide of Type V secretion system 6 29 5.5E-6 T 12-10-2018 IPR024973 ESPR domain YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 SMART SM00869 4113 4380 5.7E-46 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 Gene3D G3DSA:2.40.128.130 4072 4391 1.5E-95 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 SUPERFAMILY SSF103515 4080 4391 1.31E-52 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0673 ddb6177ba7534082fd99b03d4335abb4 4391 Gene3D G3DSA:2.160.20.20 3576 4071 1.1E-36 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 8.7E-56 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 SUPERFAMILY SSF54919 1 139 1.7E-58 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 SMART SM00562 3 140 1.9E-84 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.931 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 Gene3D G3DSA:3.30.70.141 1 141 2.7E-58 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.0E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.0E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.0E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.0E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1182 18c3d90400a277b6b5e6dd0cb3b78005 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.0E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.2E-40 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.5E-14 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 SMART SM00346 13 102 1.4E-36 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF55781 77 259 4.58E-52 T 12-10-2018 YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:3.30.450.40 85 263 6.1E-65 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_1683 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:1.10.10.10 6 82 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-36 T 12-10-2018 YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YpsIP31758_2604 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 Gene3D G3DSA:3.40.50.620 1 179 1.0E-79 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 5.2E-101 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.773 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 Gene3D G3DSA:3.30.1300.10 180 283 7.6E-31 T 12-10-2018 YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 SUPERFAMILY SSF52374 1 281 2.25E-105 T 12-10-2018 YpsIP31758_3344 880e2ecc6263dd9834421c1512aa9da2 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.9E-110 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 Gene3D G3DSA:3.40.1350.30 56 211 5.7E-75 T 12-10-2018 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 206 372 4.0E-18 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 SUPERFAMILY SSF53335 3 372 1.1E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.975 T 12-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 2.4E-219 T 12-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 7.4E-57 T 12-10-2018 YpsIP31758_2640 43f34a356c0b0956c32a6b89c9e0d347 376 Gene3D G3DSA:3.40.50.150 14 368 5.7E-75 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Gene3D G3DSA:3.30.360.10 625 795 3.7E-121 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Pfam PF13840 ACT domain 395 453 6.7E-8 T 12-10-2018 IPR027795 CASTOR, ACT domain YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.2E-50 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.9E-143 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 SUPERFAMILY SSF55021 303 381 5.95E-23 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Gene3D G3DSA:3.30.2130.10 301 464 1.9E-48 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 SUPERFAMILY SSF55021 383 476 3.49E-22 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Gene3D G3DSA:3.40.1160.10 1 297 9.6E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Pfam PF01842 ACT domain 324 375 4.1E-8 T 12-10-2018 IPR002912 ACT domain YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 SUPERFAMILY SSF55347 614 797 4.32E-53 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 SUPERFAMILY SSF51735 464 636 1.89E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 4.0E-28 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 Gene3D G3DSA:3.40.50.720 466 811 3.7E-121 T 12-10-2018 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YpsIP31758_3476 dcc46edf3fd341b2d076bcbaa0dfed9b 819 SUPERFAMILY SSF53633 1 297 1.06E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0187 be13e550281057eebb281cb1ac8ed073 293 Pfam PF00483 Nucleotidyl transferase 2 238 7.7E-71 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_0187 be13e550281057eebb281cb1ac8ed073 293 SUPERFAMILY SSF53448 1 286 2.93E-92 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0187 be13e550281057eebb281cb1ac8ed073 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.1E-159 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 YpsIP31758_0187 be13e550281057eebb281cb1ac8ed073 293 Gene3D G3DSA:3.90.550.10 1 293 1.1E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 61 79 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 92 107 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 215 233 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 243 260 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 280 293 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 191 206 2.8E-47 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 SUPERFAMILY SSF53807 41 297 2.0E-54 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 Pfam PF01497 Periplasmic binding protein 44 278 1.6E-44 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 Gene3D G3DSA:3.40.50.1980 131 302 2.6E-55 T 12-10-2018 YpsIP31758_3332 f8c5052301364f8b34cd921728412e22 303 Gene3D G3DSA:3.40.50.1980 39 128 1.7E-22 T 12-10-2018 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 SUPERFAMILY SSF52954 327 419 1.23E-22 T 12-10-2018 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 PIRSF PIRSF001549 2 421 1.1E-124 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.2E-45 T 12-10-2018 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 Gene3D G3DSA:3.30.930.10 2 322 4.7E-118 T 12-10-2018 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 SUPERFAMILY SSF55681 5 320 1.26E-105 T 12-10-2018 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 Gene3D G3DSA:3.40.50.800 327 422 4.5E-24 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 Pfam PF03129 Anticodon binding domain 331 418 1.6E-9 T 12-10-2018 IPR004154 Anticodon-binding YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.038 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 YpsIP31758_1187 8a38644d08022512269c2e30944541d7 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 6.8E-155 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 SUPERFAMILY SSF111369 125 263 1.05E-8 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Pfam PF13437 HlyD family secretion protein 214 329 5.5E-10 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:2.40.30.170 228 347 3.6E-27 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 SUPERFAMILY SSF111369 50 111 6.15E-10 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.7E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:1.10.287.470 85 113 8.2E-12 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:1.10.287.470 118 187 5.5E-6 T 12-10-2018 YpsIP31758_0535 1424e6a94d318c96b37551f1721fa90a 349 Gene3D G3DSA:2.40.50.100 50 84 8.2E-12 T 12-10-2018 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.6E-81 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 3.6E-238 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 SUPERFAMILY SSF64158 79 311 9.42E-86 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 1.9E-82 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 PIRSF PIRSF001492 1 515 4.4E-205 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 SUPERFAMILY SSF53649 5 511 7.2E-74 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 Gene3D G3DSA:3.40.720.10 7 511 8.8E-216 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 Gene3D G3DSA:3.40.1450.10 79 313 8.8E-216 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_0075 0bbd9242a784ce9fa875deee29ed816f 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.976 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF64397 4 233 6.93E-77 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF118352 226 283 1.7E-19 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 Pfam PF01430 Hsp33 protein 5 274 6.5E-87 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 PIRSF PIRSF005261 1 285 3.7E-74 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.55.30.10 1 177 7.5E-66 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:1.10.287.480 178 226 1.2E-23 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.367 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3977 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.90.1280.10 227 286 4.4E-23 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:1.20.5.710 3 51 2.9E-21 T 12-10-2018 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF54736 51 122 1.12E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF48300 4 58 3.66E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 1.1E-31 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:3.30.1390.10 52 122 4.1E-33 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 2.5E-14 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 6.3E-48 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 7.0E-29 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3861 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.251 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 SMART SM00382 361 547 2.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 Pfam PF00664 ABC transporter transmembrane region 21 291 3.1E-39 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 Pfam PF00005 ABC transporter 352 500 2.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 SUPERFAMILY SSF52540 324 572 1.31E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 Gene3D G3DSA:3.40.50.300 328 585 4.9E-77 T 12-10-2018 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 SUPERFAMILY SSF90123 7 319 6.41E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 Gene3D G3DSA:1.20.1560.10 2 319 2.9E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_3080 1b1e2c4a205a0614b04945bf1ffbf585 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 Gene3D G3DSA:3.40.50.720 1 245 4.7E-72 T 12-10-2018 YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 SUPERFAMILY SSF51735 4 245 3.95E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 6.5E-57 T 12-10-2018 YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2412 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 5.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Pfam PF05175 Methyltransferase small domain 44 179 4.2E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 SUPERFAMILY SSF53335 16 202 5.08E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Gene3D G3DSA:3.40.50.150 14 244 3.2E-59 T 12-10-2018 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 248 56.536 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 131 3.2E-5 T 12-10-2018 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 173 3.2E-5 T 12-10-2018 YpsIP31758_1127 3f7fc956d9e0b4cd5bdc2a4b1d6bcf68 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 51 65 3.2E-5 T 12-10-2018 YpsIP31758_4050 2e2c4b4b5d35cb0474371ff20dec4e05 375 Pfam PF13556 PucR C-terminal helix-turn-helix domain 315 373 3.6E-19 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain YpsIP31758_4050 2e2c4b4b5d35cb0474371ff20dec4e05 375 Gene3D G3DSA:1.10.10.2840 248 375 1.1E-17 T 12-10-2018 YpsIP31758_4050 2e2c4b4b5d35cb0474371ff20dec4e05 375 Pfam PF05651 Putative sugar diacid recognition 6 139 2.3E-52 T 12-10-2018 IPR008599 Putative sugar diacid recognition YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 Pfam PF00581 Rhodanese-like domain 8 129 9.3E-17 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 Pfam PF00581 Rhodanese-like domain 158 272 7.4E-12 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 Gene3D G3DSA:3.40.250.10 152 276 1.5E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 SUPERFAMILY SSF52821 1 152 1.28E-40 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 SMART SM00450 7 133 2.9E-24 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 SMART SM00450 156 276 3.0E-19 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 SUPERFAMILY SSF52821 159 279 3.8E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 Gene3D G3DSA:3.40.250.10 2 150 3.1E-47 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_2787 c1766009e1e679e50c98b32153f60628 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 YpsIP31758_2015 f74659843bfaaf3383c1ac7c26cd8f08 195 Pfam PF03843 Outer membrane lipoprotein Slp family 24 168 2.2E-47 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YpsIP31758_2015 f74659843bfaaf3383c1ac7c26cd8f08 195 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 21 190 3.2E-61 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YpsIP31758_2015 f74659843bfaaf3383c1ac7c26cd8f08 195 PIRSF PIRSF004982 11 191 3.6E-47 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YpsIP31758_3748 3a4a4fdc77d1fe10d04d70ec5f2264b0 293 SUPERFAMILY SSF52540 1 274 1.13E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3748 3a4a4fdc77d1fe10d04d70ec5f2264b0 293 Gene3D G3DSA:3.40.50.300 1 282 9.4E-34 T 12-10-2018 YpsIP31758_3748 3a4a4fdc77d1fe10d04d70ec5f2264b0 293 Pfam PF13614 AAA domain 1 149 1.2E-19 T 12-10-2018 IPR025669 AAA domain YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 31 122 1.0E-35 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 PIRSF PIRSF003196 8 130 2.0E-41 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 Gene3D G3DSA:1.10.1270.10 29 129 1.1E-36 T 12-10-2018 IPR038116 TrpR-like superfamily YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 TIGRFAM TIGR01321 TrpR: trp operon repressor 35 125 4.9E-35 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 Hamap MF_00475 Trp operon repressor [trpR]. 36 129 23.4 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 Pfam PF01371 Trp repressor protein 38 124 2.3E-29 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3482 6098bfbb87b6809f57c77449fb98bbba 130 SUPERFAMILY SSF48295 27 125 2.62E-28 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YpsIP31758_4090 30b0de7d35807414f2927f4f01c80dd1 414 SUPERFAMILY SSF56059 107 308 1.33E-27 T 12-10-2018 YpsIP31758_4090 30b0de7d35807414f2927f4f01c80dd1 414 Gene3D G3DSA:3.30.470.20 99 407 8.6E-53 T 12-10-2018 YpsIP31758_4090 30b0de7d35807414f2927f4f01c80dd1 414 Pfam PF13535 ATP-grasp domain 144 285 1.1E-13 T 12-10-2018 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 SMART SM00421 136 193 4.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 2.1E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.8E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.8E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.8E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 Gene3D G3DSA:1.10.10.10 101 195 8.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2960 f94daf86aa687638e9d453d7cd2b1a58 196 SUPERFAMILY SSF46894 132 193 2.62E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 246.634 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 Gene3D G3DSA:3.40.640.10 94 358 5.2E-154 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 2.0E-170 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 459 1.7E-185 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 Gene3D G3DSA:3.90.1150.110 11 452 5.2E-154 T 12-10-2018 YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 SUPERFAMILY SSF53383 72 347 2.1E-43 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_4115 4499f8af570bfe958c90354d8df8aeeb 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.6E-9 T 12-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 YpsIP31758_3132 0662a9bf7d143e09af09551e419ef654 464 PIRSF PIRSF006060 4 462 4.0E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3132 0662a9bf7d143e09af09551e419ef654 464 Pfam PF00324 Amino acid permease 17 455 5.2E-108 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_3132 0662a9bf7d143e09af09551e419ef654 464 Gene3D G3DSA:1.20.1740.10 7 463 1.1E-61 T 12-10-2018 YpsIP31758_3132 0662a9bf7d143e09af09551e419ef654 464 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 PIRSF PIRSF000398 1 271 3.5E-63 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:1.10.1020.10 57 156 4.9E-85 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:3.40.50.150 7 239 4.9E-85 T 12-10-2018 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.7E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.7E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.7E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.7E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 SUPERFAMILY SSF53335 5 269 3.06E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 269 2.4E-93 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_3963 a385d9919fb510604bdd45c6141cf83a 271 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 253 1.6E-74 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YpsIP31758_2020 5d82b7e2b9a00037ed0d97705467957a 147 Gene3D G3DSA:1.10.3730.20 2 109 1.1E-28 T 12-10-2018 YpsIP31758_2020 5d82b7e2b9a00037ed0d97705467957a 147 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 147 32.438 T 12-10-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YpsIP31758_2020 5d82b7e2b9a00037ed0d97705467957a 147 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.3E-22 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 YpsIP31758_2020 5d82b7e2b9a00037ed0d97705467957a 147 SUPERFAMILY SSF103481 6 107 1.27E-16 T 12-10-2018 YpsIP31758_0463 c78800f8667760050bc1869ffd5cdcd0 171 PIRSF PIRSF005276 3 171 4.2E-63 T 12-10-2018 IPR007481 Stringent starvation protein B YpsIP31758_0463 c78800f8667760050bc1869ffd5cdcd0 171 SUPERFAMILY SSF101738 3 115 2.49E-48 T 12-10-2018 IPR036760 SspB-like superfamily YpsIP31758_0463 c78800f8667760050bc1869ffd5cdcd0 171 Pfam PF04386 Stringent starvation protein B 9 171 4.7E-43 T 12-10-2018 IPR007481 Stringent starvation protein B YpsIP31758_0463 c78800f8667760050bc1869ffd5cdcd0 171 Gene3D G3DSA:2.30.30.220 3 129 1.4E-52 T 12-10-2018 IPR036760 SspB-like superfamily YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 SUPERFAMILY SSF143975 1 438 1.26E-140 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 Pfam PF00920 Dehydratase family 67 618 6.8E-157 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 SUPERFAMILY SSF52016 439 620 3.92E-59 T 12-10-2018 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 Gene3D G3DSA:3.50.30.80 439 588 1.1E-52 T 12-10-2018 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 622 57.516 T 12-10-2018 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 525 536 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YpsIP31758_1476 8e1994d781842e41d4bd0e202f5ceedb 623 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 621 0.0 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 YpsIP31758_1067 e563a6f4787aff14989ee4e53d439fde 111 Gene3D G3DSA:3.90.1150.40 1 111 4.4E-56 T 12-10-2018 YpsIP31758_1067 e563a6f4787aff14989ee4e53d439fde 111 SUPERFAMILY SSF159894 1 111 1.33E-56 T 12-10-2018 YpsIP31758_1067 e563a6f4787aff14989ee4e53d439fde 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 8.1E-55 T 12-10-2018 IPR018994 Protein of unknown function DUF2002 YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 SUPERFAMILY SSF51998 27 125 1.33E-24 T 12-10-2018 YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-71 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 PIRSF PIRSF000378 2 127 1.5E-54 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 Pfam PF01228 Glycine radical 14 108 1.1E-22 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 Gene3D G3DSA:3.20.70.20 59 127 3.0E-25 T 12-10-2018 YpsIP31758_1122 0121345a6eb833a5931dce08dfec334f 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.885 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA YpsIP31758_3852 d0d3f38ce7231dcf102417a582289634 169 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 40.696 T 12-10-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YpsIP31758_3852 d0d3f38ce7231dcf102417a582289634 169 PIRSF PIRSF016548 1 161 1.3E-52 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YpsIP31758_3852 d0d3f38ce7231dcf102417a582289634 169 Gene3D G3DSA:1.20.120.1370 1 152 1.9E-54 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily YpsIP31758_3852 d0d3f38ce7231dcf102417a582289634 169 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 6.0E-57 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YpsIP31758_0358 cd3d032ee3bde668d5d50b02cde25e30 451 Pfam PF00860 Permease family 28 411 8.4E-82 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1208 03beccb7cc733ce3a37e7739abe526f2 464 Pfam PF16325 Peptidase family U32 C-terminal domain 369 450 5.0E-22 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal YpsIP31758_1208 03beccb7cc733ce3a37e7739abe526f2 464 ProSitePatterns PS01276 Peptidase family U32 signature. 172 190 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YpsIP31758_1208 03beccb7cc733ce3a37e7739abe526f2 464 Gene3D G3DSA:2.40.30.10 365 451 3.1E-11 T 12-10-2018 YpsIP31758_1208 03beccb7cc733ce3a37e7739abe526f2 464 Pfam PF01136 Peptidase family U32 86 353 4.1E-95 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YpsIP31758_B0060 b741dc54dc12f72e7962564ac2dd4de9 68 Gene3D G3DSA:1.20.1280.40 1 68 2.9E-34 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_B0060 b741dc54dc12f72e7962564ac2dd4de9 68 SUPERFAMILY SSF68989 1 68 1.02E-29 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_B0060 b741dc54dc12f72e7962564ac2dd4de9 68 Pfam PF05321 Haemolysin expression modulating protein 9 65 3.6E-31 T 12-10-2018 IPR007985 Haemolysin expression modulating, HHA YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 SUPERFAMILY SSF52821 128 268 6.96E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 Pfam PF00581 Rhodanese-like domain 138 233 2.3E-15 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 Gene3D G3DSA:3.30.70.100 13 118 1.5E-14 T 12-10-2018 YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 Gene3D G3DSA:3.40.250.10 126 271 1.3E-43 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 SMART SM00450 136 237 9.3E-27 T 12-10-2018 IPR001763 Rhodanese-like domain YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 Pfam PF12368 Rhodanase C-terminal 246 308 6.1E-19 T 12-10-2018 IPR022111 Rhodanase, C-terminal YpsIP31758_1560 8f59455028857041b2f900a023a85c2c 355 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.612 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 57 143 1.6E-30 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 80.24 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.286.20 189 228 6.3E-23 T 12-10-2018 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 56 141 7.63E-22 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 Pfam PF00889 Elongation factor TS 73 265 1.1E-67 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.8.10 1 56 1.7E-25 T 12-10-2018 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF46934 4 55 4.68E-18 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 144 283 3.79E-53 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_1014 0f19abe77aa2614b06a5aa4fcab3bdac 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 5.1E-116 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YpsIP31758_1720 4f1037756aaabe53b7756ba52229b6b4 335 Gene3D G3DSA:1.10.3470.10 7 332 1.3E-105 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_1720 4f1037756aaabe53b7756ba52229b6b4 335 Pfam PF01032 FecCD transport family 29 330 1.1E-83 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_1720 4f1037756aaabe53b7756ba52229b6b4 335 SUPERFAMILY SSF81345 12 330 5.1E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_1720 4f1037756aaabe53b7756ba52229b6b4 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.814 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 Pfam PF02082 Transcriptional regulator 1 83 2.4E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 Gene3D G3DSA:1.10.10.10 1 144 4.4E-56 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.305 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-47 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.5E-67 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YpsIP31758_1167 bb3282ee938aeb2282dc15c03ef7e083 164 SUPERFAMILY SSF46785 2 133 1.17E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 219 556 4.5E-143 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 SUPERFAMILY SSF52794 111 211 3.31E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 Pfam PF02378 Phosphotransferase system, EIIC 237 500 2.9E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 114 195 3.1E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 SUPERFAMILY SSF52794 4 88 7.85E-11 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 113 196 2.3E-39 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 YpsIP31758_2681 4bf381db30bd15b02d157633c7497580 566 Gene3D G3DSA:3.40.50.2300 101 212 1.0E-37 T 12-10-2018 YpsIP31758_2188 c9d1eeb0c53d76774c9254c9e09f8518 171 Pfam PF04985 Phage tail tube protein FII 4 170 4.2E-66 T 12-10-2018 IPR006498 Tail tube protein YpsIP31758_2188 c9d1eeb0c53d76774c9254c9e09f8518 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 7.5E-55 T 12-10-2018 IPR006498 Tail tube protein YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 SUPERFAMILY SSF46894 115 185 2.41E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 2.1E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 2.1E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 2.1E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 Gene3D G3DSA:1.10.10.10 104 189 2.2E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 184 2.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 SMART SM00421 127 184 6.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1353 501153da0d04d81cb0998b0f0da1af0f 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 144 171 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF46894 129 226 3.68E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF52172 3 126 1.08E-42 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:3.40.50.2300 1 127 1.0E-37 T 12-10-2018 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00072 Response regulator receiver domain 5 117 9.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:1.10.10.10 128 229 8.0E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00862 150 225 3.2E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.0E-114 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.2E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3136 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00448 3 116 1.3E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2964 90241b120da54819515b91f49296cb16 95 Gene3D G3DSA:3.30.70.100 2 95 3.5E-32 T 12-10-2018 YpsIP31758_2964 90241b120da54819515b91f49296cb16 95 SUPERFAMILY SSF54909 1 90 9.08E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_2964 90241b120da54819515b91f49296cb16 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.0E-10 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain YpsIP31758_0234 4b0c2547df707bcbbdb9b899962d6b0e 208 Pfam PF07947 YhhN family 26 206 3.8E-44 T 12-10-2018 IPR012506 YhhN-like GO:0016021 YpsIP31758_1881 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.40.50.720 5 316 8.9E-140 T 12-10-2018 YpsIP31758_1881 1013a1079dd1943eba885854c07ebd67 349 SUPERFAMILY SSF51735 3 196 3.32E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1881 1013a1079dd1943eba885854c07ebd67 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.1E-23 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_1881 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.30.360.10 127 330 8.9E-140 T 12-10-2018 YpsIP31758_1881 1013a1079dd1943eba885854c07ebd67 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.8E-13 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 SUPERFAMILY SSF100920 384 540 1.14E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Pfam PF00012 Hsp70 protein 4 602 2.2E-265 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.8E-290 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Gene3D G3DSA:2.60.34.10 383 523 7.6E-67 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.0E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 SUPERFAMILY SSF53067 187 382 8.43E-68 T 12-10-2018 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Gene3D G3DSA:3.90.640.10 229 316 5.2E-171 T 12-10-2018 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Gene3D G3DSA:1.20.1270.10 524 603 5.9E-29 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 SUPERFAMILY SSF53067 4 183 9.39E-66 T 12-10-2018 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Gene3D G3DSA:3.30.420.40 5 379 5.2E-171 T 12-10-2018 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.793 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 Gene3D G3DSA:3.30.420.40 180 366 5.2E-171 T 12-10-2018 YpsIP31758_3466 ebfe7dce67a5b363b161159cedd54b27 636 SUPERFAMILY SSF100934 535 608 3.73E-6 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 4.7E-117 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 Gene3D G3DSA:3.40.50.1970 1 183 1.7E-52 T 12-10-2018 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 SUPERFAMILY SSF56796 3 380 5.89E-122 T 12-10-2018 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 Gene3D G3DSA:1.20.1090.10 184 382 6.6E-69 T 12-10-2018 YpsIP31758_3758 09634621db73c88f8c5479ccf25f894b 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 7.5E-172 T 12-10-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 Gene3D G3DSA:3.40.47.10 1 270 2.2E-48 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 SUPERFAMILY SSF53901 230 425 1.25E-56 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 262 1.3E-25 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 382 5.4E-30 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 Gene3D G3DSA:3.40.47.10 272 414 5.9E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 SUPERFAMILY SSF53901 4 267 1.94E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2520 0ab7b36e76587228862b20e0c2c49a34 427 SMART SM00825 Beta-ketoacyl synthase 6 427 5.6E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YpsIP31758_1537 d001fcedc3c219f4575024a1f488f8c5 448 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 59 429 4.9E-135 T 12-10-2018 IPR013397 CRISPR-associated protein Csy1 YpsIP31758_1537 d001fcedc3c219f4575024a1f488f8c5 448 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 58 436 4.2E-160 T 12-10-2018 IPR013397 CRISPR-associated protein Csy1 YpsIP31758_3781 11afddc341e5d38ff9de38ffd7fc7d4e 230 Gene3D G3DSA:2.60.40.10 30 116 2.6E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_3781 11afddc341e5d38ff9de38ffd7fc7d4e 230 SUPERFAMILY SSF49584 148 222 3.27E-5 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_3781 11afddc341e5d38ff9de38ffd7fc7d4e 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 141 4.1E-17 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_3781 11afddc341e5d38ff9de38ffd7fc7d4e 230 SUPERFAMILY SSF49354 26 140 5.05E-16 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_0671 151023b6f0073396fb6b39b28e3d6cc9 496 Pfam PF07906 ShET2 enterotoxin, N-terminal region 8 294 1.8E-106 T 12-10-2018 IPR012927 ShET2 enterotoxin, N-terminal YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.4E-203 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.034 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 Pfam PF00202 Aminotransferase class-III 32 396 5.9E-79 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 Gene3D G3DSA:3.40.640.10 69 317 8.4E-181 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 Gene3D G3DSA:3.90.1150.10 7 419 8.4E-181 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3330 44fdbde2ee95da47c452a8e951ed2be5 426 SUPERFAMILY SSF53383 2 425 2.45E-137 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2963 fa0f0d1b9fde9bd57d913ee510413f79 64 Gene3D G3DSA:1.20.58.250 12 64 1.0E-7 T 12-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2963 fa0f0d1b9fde9bd57d913ee510413f79 64 Pfam PF08971 Glycogen synthesis protein 11 58 4.4E-10 T 12-10-2018 IPR015065 Surface composition regulator YpsIP31758_2963 fa0f0d1b9fde9bd57d913ee510413f79 64 SUPERFAMILY SSF46575 15 60 6.15E-8 T 12-10-2018 YpsIP31758_2963 fa0f0d1b9fde9bd57d913ee510413f79 64 Hamap MF_00525 Surface composition regulator [glgS]. 5 64 19.107 T 12-10-2018 IPR015065 Surface composition regulator YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 PIRSF PIRSF002465 2 344 8.4E-125 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 SUPERFAMILY SSF53659 5 340 1.07E-102 T 12-10-2018 YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 Pfam PF02504 Fatty acid synthesis protein 5 331 2.9E-117 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 142.095 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 Gene3D G3DSA:3.40.718.10 3 343 5.9E-123 T 12-10-2018 YpsIP31758_1575 92fc272180de3d740530a42229f5cb97 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 5.8E-134 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YpsIP31758_1145 8ed5d31e3cfcebbfa46b033f92d4a2f0 200 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 42 183 47.484 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 YpsIP31758_1145 8ed5d31e3cfcebbfa46b033f92d4a2f0 200 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 87 124 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YpsIP31758_1145 8ed5d31e3cfcebbfa46b033f92d4a2f0 200 Gene3D G3DSA:3.40.140.10 32 197 5.4E-65 T 12-10-2018 YpsIP31758_1145 8ed5d31e3cfcebbfa46b033f92d4a2f0 200 SUPERFAMILY SSF53927 36 187 6.19E-56 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_1145 8ed5d31e3cfcebbfa46b033f92d4a2f0 200 Pfam PF14437 MafB19-like deaminase 38 183 2.0E-30 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 YpsIP31758_0712 d2c22d048843308eb8a5cbec3f6da883 582 Gene3D G3DSA:1.10.510.40 364 564 7.8E-57 T 12-10-2018 YpsIP31758_0712 d2c22d048843308eb8a5cbec3f6da883 582 Pfam PF04183 IucA / IucC family 132 374 1.3E-67 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 YpsIP31758_0712 d2c22d048843308eb8a5cbec3f6da883 582 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 551 7.2E-35 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain YpsIP31758_0712 d2c22d048843308eb8a5cbec3f6da883 582 Gene3D G3DSA:1.10.274.90 3 113 8.8E-14 T 12-10-2018 YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 Gene3D G3DSA:3.40.50.300 124 324 7.6E-7 T 12-10-2018 YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 Pfam PF06744 Type VI secretion protein IcmF C-terminal 916 1110 6.5E-54 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 Pfam PF14331 ImcF-related N-terminal domain 197 377 4.0E-29 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 SUPERFAMILY SSF52540 122 274 2.83E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 Pfam PF06761 Intracellular multiplication and human macrophage-killing 513 792 9.0E-61 T 12-10-2018 IPR009612 ImcF-related YpsIP31758_3421 6681f22846a961a68a2e66597b1ddca8 1164 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 7 1162 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 SUPERFAMILY SSF51556 53 354 2.83E-90 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 Gene3D G3DSA:3.20.20.140 53 354 1.8E-120 T 12-10-2018 YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 SUPERFAMILY SSF51338 8 386 1.26E-12 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 PIRSF PIRSF038994 1 387 1.4E-132 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 Gene3D G3DSA:2.30.40.10 11 381 1.8E-120 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 18 380 3.6E-88 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YpsIP31758_0936 12e63ca9c43acebf5a84c122fa66ccc6 388 Pfam PF01979 Amidohydrolase family 49 382 1.1E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_2040 838685f4c5277dbb62723300a4f4b813 254 SUPERFAMILY SSF110395 3 244 7.85E-76 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 YpsIP31758_2040 838685f4c5277dbb62723300a4f4b813 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 204 28.074 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 YpsIP31758_2040 838685f4c5277dbb62723300a4f4b813 254 Pfam PF03932 CutC family 3 201 3.4E-73 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 YpsIP31758_2040 838685f4c5277dbb62723300a4f4b813 254 Gene3D G3DSA:3.20.20.380 1 253 1.2E-87 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 354 2.9E-72 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF00460 Flagella basal body rod protein 6 35 1.4E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 493 551 1.1E-5 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.1E-83 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YpsIP31758_2314 c7141f3595d76a469f142283c0bf1a6b 554 SUPERFAMILY SSF64518 100 551 4.84E-47 T 12-10-2018 YpsIP31758_2489 64468269b115b1207569496b8cc4735d 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 580 5.4E-174 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_2489 64468269b115b1207569496b8cc4735d 587 Pfam PF05947 Type VI secretion system, TssF 6 584 1.9E-190 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_2489 64468269b115b1207569496b8cc4735d 587 PIRSF PIRSF028304 1 586 2.3E-162 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 SUPERFAMILY SSF102645 185 400 2.09E-80 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 Pfam PF02441 Flavoprotein 7 178 1.3E-45 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 Gene3D G3DSA:3.40.50.1950 1 186 2.3E-58 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 2.6E-74 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 Gene3D G3DSA:3.40.50.10300 187 404 1.9E-87 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 SUPERFAMILY SSF52507 3 181 8.76E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YpsIP31758_0060 aae3a7c23dceb4381f19fc6b026adec2 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 395 1.7E-163 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 YpsIP31758_3751 b86a7f3a413f01b980824643ef677b97 141 SUPERFAMILY SSF50203 19 130 1.23E-40 T 12-10-2018 IPR008992 Enterotoxin GO:0009405 YpsIP31758_3751 b86a7f3a413f01b980824643ef677b97 141 Gene3D G3DSA:2.40.50.110 21 139 2.8E-47 T 12-10-2018 YpsIP31758_3234 d12240e40b9e80570c14f7112d5f1bc6 532 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 19 527 5.7E-257 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 YpsIP31758_3234 d12240e40b9e80570c14f7112d5f1bc6 532 Gene3D G3DSA:3.30.590.20 30 530 8.9E-189 T 12-10-2018 YpsIP31758_3234 d12240e40b9e80570c14f7112d5f1bc6 532 SUPERFAMILY SSF55931 17 527 7.85E-202 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 YpsIP31758_3234 d12240e40b9e80570c14f7112d5f1bc6 532 Pfam PF04262 Glutamate-cysteine ligase 23 393 2.4E-172 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 YpsIP31758_3234 d12240e40b9e80570c14f7112d5f1bc6 532 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 532 229.905 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:1.10.260.40 1 57 2.0E-20 T 12-10-2018 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 SUPERFAMILY SSF53822 57 319 1.04E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:3.40.50.2300 76 316 1.4E-83 T 12-10-2018 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 4.6E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 SMART SM00354 1 70 9.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 310 3.0E-33 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 Gene3D G3DSA:3.40.50.2300 162 291 1.4E-83 T 12-10-2018 YpsIP31758_2393 6e69791c67a9db2604c7213c2ea64aea 338 SUPERFAMILY SSF47413 2 58 2.69E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Gene3D G3DSA:3.40.1390.10 1 99 9.4E-37 T 12-10-2018 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Gene3D G3DSA:2.160.10.10 100 309 8.9E-67 T 12-10-2018 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.2E-124 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.424 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.8E-8 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.8E-7 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 4.4E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 YpsIP31758_1023 6938b5b760ab751d09ed8362262e21cd 340 SUPERFAMILY SSF51161 33 316 9.58E-87 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 2.8E-187 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 SUPERFAMILY SSF50475 6 325 4.32E-128 T 12-10-2018 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 1.4E-173 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.872 T 12-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 Gene3D G3DSA:1.20.5.570 458 497 1.4E-19 T 12-10-2018 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 Gene3D G3DSA:3.40.1670.10 340 457 3.9E-52 T 12-10-2018 YpsIP31758_0280 90583bb4fa8fd5904052b14b2005fa44 498 SUPERFAMILY SSF143968 326 489 4.32E-68 T 12-10-2018 YpsIP31758_2128 a51c4f757f1bc455297eb0382412670a 155 Pfam PF13994 PgaD-like protein 5 134 3.0E-37 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 YpsIP31758_2128 a51c4f757f1bc455297eb0382412670a 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 138 8.4E-40 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 YpsIP31758_2128 a51c4f757f1bc455297eb0382412670a 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 2.0E-59 T 12-10-2018 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 Gene3D G3DSA:3.40.50.180 148 349 2.5E-84 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 Pfam PF01339 CheB methylesterase 159 336 1.4E-62 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 Gene3D G3DSA:3.40.50.2300 1 133 9.7E-31 T 12-10-2018 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 PIRSF PIRSF000876 1 346 1.3E-137 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.328 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 SUPERFAMILY SSF52738 156 343 2.22E-75 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 Pfam PF00072 Response regulator receiver domain 6 109 2.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 SUPERFAMILY SSF52172 1 108 1.99E-27 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1645 89f839375ddeb026bc1b3f64350ec2b3 349 SMART SM00448 4 119 2.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 Gene3D G3DSA:3.40.50.300 31 257 8.4E-49 T 12-10-2018 YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 SUPERFAMILY SSF52540 304 516 2.62E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 Pfam PF00005 ABC transporter 54 199 9.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 Gene3D G3DSA:3.40.50.300 294 524 2.0E-36 T 12-10-2018 YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 SUPERFAMILY SSF52540 34 248 1.46E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 SMART SM00382 308 503 0.0032 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 SMART SM00382 61 247 1.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2688 84eb72e5077705aaff6156b8d7ab6227 524 Pfam PF00005 ABC transporter 304 454 7.7E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1248 5e39c3dfa6289e207a6e60da0b20e6ed 352 PIRSF PIRSF026343 9 346 1.3E-113 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC YpsIP31758_1248 5e39c3dfa6289e207a6e60da0b20e6ed 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 1.6E-111 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein YpsIP31758_1248 5e39c3dfa6289e207a6e60da0b20e6ed 352 Gene3D G3DSA:3.30.310.170 227 350 2.0E-49 T 12-10-2018 YpsIP31758_1248 5e39c3dfa6289e207a6e60da0b20e6ed 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 39.955 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC YpsIP31758_1248 5e39c3dfa6289e207a6e60da0b20e6ed 352 Gene3D G3DSA:3.30.530.50 101 213 1.5E-44 T 12-10-2018 YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.30.300.310 456 558 1.3E-31 T 12-10-2018 YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 Gene3D G3DSA:3.40.50.12780 12 451 3.0E-115 T 12-10-2018 YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.2E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 SUPERFAMILY SSF56801 17 554 1.57E-147 T 12-10-2018 YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_2014 b017b12e753d19eb6b3a41eb6f0daff7 562 Pfam PF00501 AMP-binding enzyme 29 460 5.3E-107 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 11 557 1.0E-224 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 300 510 3.4E-36 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 150 2.2E-6 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 Hamap MF_00520 Ribulokinase [araB]. 10 567 52.299 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 Gene3D G3DSA:3.30.420.40 14 535 1.0E-118 T 12-10-2018 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 Gene3D G3DSA:3.30.420.460 345 546 1.0E-118 T 12-10-2018 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 SUPERFAMILY SSF53067 294 557 1.11E-43 T 12-10-2018 YpsIP31758_1886 19b5c0605cc41850209f819da312649b 567 SUPERFAMILY SSF53067 13 293 1.14E-21 T 12-10-2018 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 4.6E-229 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:3.90.1170.30 337 433 5.1E-34 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF52418 75 334 4.32E-87 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:1.20.970.10 7 195 5.3E-129 T 12-10-2018 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.278 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.8E-50 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 SMART SM00941 350 424 4.3E-34 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF54680 337 439 5.89E-34 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 8.1E-19 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 6.3E-166 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 423 1.9E-25 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 Gene3D G3DSA:3.40.1030.10 70 322 5.3E-129 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 SUPERFAMILY SSF47648 3 70 2.35E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3497 cec115648c698b33e05ce7ad3a092e7e 440 PIRSF PIRSF000478 1 439 1.4E-152 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 4 170 5.21E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 174 411 4.4E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 Gene3D G3DSA:3.40.47.10 4 410 3.5E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 168 1.8E-7 T 12-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 267 408 1.0E-15 T 12-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 YpsIP31758_2518 efacffae32df6accc988a0b4cd4cb833 412 Gene3D G3DSA:3.40.47.10 178 331 3.5E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 Gene3D G3DSA:3.40.309.10 256 460 5.1E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 Pfam PF00171 Aldehyde dehydrogenase family 27 487 8.7E-136 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 16 491 3.0E-201 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 SUPERFAMILY SSF53720 3 493 6.54E-144 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_2977 a9ece919dec9b846e50bbfdd2d07af83 508 Gene3D G3DSA:3.40.605.10 31 468 5.1E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_B0048 445336acd86fe2a342e3d19ca879c63f 38 Pfam PF01527 Transposase 2 38 6.4E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YpsIP31758_2261 f364574c1df69f3dbbb2851a2d2594b8 199 SUPERFAMILY SSF52218 1 198 6.68E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_2261 f364574c1df69f3dbbb2851a2d2594b8 199 Gene3D G3DSA:3.40.50.360 1 199 3.0E-77 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_2261 f364574c1df69f3dbbb2851a2d2594b8 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.6E-98 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YpsIP31758_2261 f364574c1df69f3dbbb2851a2d2594b8 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 45.913 T 12-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YpsIP31758_2261 f364574c1df69f3dbbb2851a2d2594b8 199 Pfam PF03358 NADPH-dependent FMN reductase 13 142 2.5E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YpsIP31758_2849 456da7aa80ef0962f40fe1844da14f1c 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 4.2E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2849 456da7aa80ef0962f40fe1844da14f1c 231 SUPERFAMILY SSF161098 5 219 7.46E-52 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2849 456da7aa80ef0962f40fe1844da14f1c 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 7.0E-75 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 YpsIP31758_2849 456da7aa80ef0962f40fe1844da14f1c 231 Gene3D G3DSA:1.10.3720.10 2 225 1.9E-64 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 Gene3D G3DSA:3.10.20.310 52 137 5.7E-6 T 12-10-2018 YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 Gene3D G3DSA:2.40.160.50 165 556 2.0E-62 T 12-10-2018 YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 PIRSF PIRSF029745 6 556 1.6E-175 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 Pfam PF17287 POTRA domain 135 187 3.7E-16 T 12-10-2018 IPR035251 ShlB, POTRA domain YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 Pfam PF08479 POTRA domain, ShlB-type 59 134 3.9E-17 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_4076 a4df57accdb47e8540eee563fdd135cd 556 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 196 520 5.3E-72 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 Pfam PF00149 Calcineurin-like phosphoesterase 1 97 4.7E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 4.6E-76 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 Gene3D G3DSA:3.60.21.10 1 281 3.3E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 SUPERFAMILY SSF56300 1 340 3.8E-59 T 12-10-2018 YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 1.6E-24 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YpsIP31758_3138 f11bc98533a22058144aa5610db072c9 414 Gene3D G3DSA:3.30.160.720 283 345 1.7E-25 T 12-10-2018 YpsIP31758_3500 86e0a9bb73b2ca3f67318a448129a3ad 262 Gene3D G3DSA:3.20.20.140 2 258 5.8E-85 T 12-10-2018 YpsIP31758_3500 86e0a9bb73b2ca3f67318a448129a3ad 262 SUPERFAMILY SSF51556 4 258 5.37E-76 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_3500 86e0a9bb73b2ca3f67318a448129a3ad 262 PIRSF PIRSF005902 1 259 5.3E-67 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_3500 86e0a9bb73b2ca3f67318a448129a3ad 262 Pfam PF01026 TatD related DNase 5 256 1.0E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 YpsIP31758_3500 86e0a9bb73b2ca3f67318a448129a3ad 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 SUPERFAMILY SSF52540 6 227 2.52E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 Pfam PF00005 ABC transporter 28 182 3.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 227 4.4E-109 T 12-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 SMART SM00382 37 230 1.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 Gene3D G3DSA:3.40.50.300 5 233 1.0E-48 T 12-10-2018 YpsIP31758_3565 1d1585127a5dd8617c058e5a3c1bc87e 239 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1091 fae58e36ded1eb1b3cdb33b16390f385 105 SUPERFAMILY SSF52794 4 103 7.85E-32 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_1091 fae58e36ded1eb1b3cdb33b16390f385 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.5E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_1091 fae58e36ded1eb1b3cdb33b16390f385 105 Gene3D G3DSA:3.40.50.2300 1 105 4.2E-33 T 12-10-2018 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 SUPERFAMILY SSF100879 244 334 1.31E-5 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Pfam PF13438 Domain of unknown function (DUF4113) 369 417 8.5E-19 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 354 9.4E-15 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Pfam PF00817 impB/mucB/samB family 5 149 1.8E-30 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 SUPERFAMILY SSF56672 1 236 2.58E-60 T 12-10-2018 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Gene3D G3DSA:2.30.40.20 10 73 1.3E-34 T 12-10-2018 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Gene3D G3DSA:3.30.1490.100 243 355 2.5E-7 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Gene3D G3DSA:1.10.150.20 171 227 2.7E-9 T 12-10-2018 YpsIP31758_B0053 3794386f409458a0fb5a610648a1e304 421 Gene3D G3DSA:3.30.70.270 4 154 1.3E-34 T 12-10-2018 YpsIP31758_1086 9c1779582ec32a8ca804577ea9f63ea5 109 Gene3D G3DSA:1.10.890.10 28 104 3.2E-35 T 12-10-2018 IPR038303 HNS-dependent expression A/B superfamily YpsIP31758_1086 9c1779582ec32a8ca804577ea9f63ea5 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 34 102 2.0E-35 T 12-10-2018 YpsIP31758_1086 9c1779582ec32a8ca804577ea9f63ea5 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 101 28.616 T 12-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 YpsIP31758_1086 9c1779582ec32a8ca804577ea9f63ea5 109 SUPERFAMILY SSF47752 33 94 3.14E-5 T 12-10-2018 IPR036831 HNS-dependent expression A superfamily GO:0030288|GO:0071468 YpsIP31758_1086 9c1779582ec32a8ca804577ea9f63ea5 109 Pfam PF06411 HdeA/HdeB family 9 94 9.6E-24 T 12-10-2018 IPR010486 HNS-dependent expression A/B YpsIP31758_0734 f6bb7ffeb355683c788cb57033a40b64 740 Gene3D G3DSA:2.70.70.10 20 167 2.2E-9 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_0734 f6bb7ffeb355683c788cb57033a40b64 740 SUPERFAMILY SSF53955 494 717 1.01E-6 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Pfam PF00072 Response regulator receiver domain 5 115 2.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Gene3D G3DSA:3.40.50.2300 1 131 7.9E-34 T 12-10-2018 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SMART SM00448 3 115 1.6E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Gene3D G3DSA:1.10.10.10 132 243 1.6E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 2.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SUPERFAMILY SSF46894 141 239 1.87E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SMART SM00862 162 238 1.8E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_4024 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SUPERFAMILY SSF52172 2 124 1.57E-35 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.30.30.30 1 65 3.8E-15 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM01185 69 125 3.6E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 PIRSF PIRSF005901 1 190 9.3E-60 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.9E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50104 1 64 1.56E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 66 130 1.7E-15 T 12-10-2018 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 132 189 2.6E-19 T 12-10-2018 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 6.5E-16 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.9E-17 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 67 130 3.68E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 1.6E-96 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 132 189 2.68E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.731 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP YpsIP31758_2698 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM00841 133 188 8.3E-24 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 496 4.6E-222 T 12-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 Gene3D G3DSA:3.30.1730.10 4 170 5.2E-58 T 12-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 Gene3D G3DSA:3.40.50.1580 185 496 1.8E-113 T 12-10-2018 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 Hamap MF_01932 AMP nucleosidase [amn]. 5 496 57.622 T 12-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 Pfam PF01048 Phosphorylase superfamily 280 443 7.1E-18 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 165 1.4E-49 T 12-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YpsIP31758_1846 3c9c6428456d02f1b890f2abf1c4e002 496 SUPERFAMILY SSF53167 12 496 3.98E-152 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YpsIP31758_1319 41795cb14b36e777735f215afbc48dc3 244 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 222 2.2E-45 T 12-10-2018 YpsIP31758_1319 41795cb14b36e777735f215afbc48dc3 244 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 240 28.747 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 YpsIP31758_1669 1637fd4a35226ed2606a8fe77d9ac61e 415 Pfam PF04403 Paraquat-inducible protein A 250 406 2.1E-46 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like YpsIP31758_1669 1637fd4a35226ed2606a8fe77d9ac61e 415 Pfam PF04403 Paraquat-inducible protein A 53 204 1.4E-38 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like YpsIP31758_1669 1637fd4a35226ed2606a8fe77d9ac61e 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 405 4.2E-172 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 Gene3D G3DSA:3.40.50.140 1 138 1.6E-20 T 12-10-2018 YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 411 425 1.6E-7 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 160 178 1.6E-7 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 267 276 1.6E-7 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 81 94 1.6E-7 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 SUPERFAMILY SSF56712 3 482 9.16E-45 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YpsIP31758_B0031 1dbf892ada0aa8c39d92a3ed5d9ccd7d 519 Pfam PF01751 Toprim domain 4 114 5.9E-12 T 12-10-2018 IPR006171 TOPRIM domain YpsIP31758_1670 7bbec0af1547f46428c9fd2d89e4a6bb 165 Pfam PF13185 GAF domain 39 146 2.2E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 YpsIP31758_1670 7bbec0af1547f46428c9fd2d89e4a6bb 165 SUPERFAMILY SSF55781 2 151 1.32E-39 T 12-10-2018 YpsIP31758_1670 7bbec0af1547f46428c9fd2d89e4a6bb 165 Gene3D G3DSA:3.30.450.40 1 165 4.1E-65 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 SUPERFAMILY SSF51621 4 264 6.28E-104 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 2.6E-104 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.804 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 265 8.0E-117 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 PIRSF PIRSF000388 1 265 5.2E-99 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YpsIP31758_3343 18ba1ebf8348e30b4786587bd4ecde33 265 Gene3D G3DSA:3.20.20.60 1 264 6.5E-103 T 12-10-2018 YpsIP31758_0371 8a5e44d9b44a98dcb06dfeab733db6ab 448 Pfam PF13449 Esterase-like activity of phytase 90 421 7.9E-66 T 12-10-2018 IPR027372 Phytase-like domain YpsIP31758_0371 8a5e44d9b44a98dcb06dfeab733db6ab 448 SUPERFAMILY SSF63829 93 295 4.97E-6 T 12-10-2018 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 2.4E-89 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 1.6E-116 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 Gene3D G3DSA:3.20.20.60 1 418 5.3E-190 T 12-10-2018 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 Pfam PF00463 Isocitrate lyase family 258 435 5.1E-50 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 Pfam PF00463 Isocitrate lyase family 9 256 9.5E-63 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 SUPERFAMILY SSF51621 5 435 7.63E-156 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_0295 290ea0be5623584736e0b8c2b5428fe4 435 PIRSF PIRSF001362 1 435 9.8E-225 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 YpsIP31758_2055 effb0304a693a39126dee1df96b7e26f 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 218 7.4E-24 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YpsIP31758_2055 effb0304a693a39126dee1df96b7e26f 276 Gene3D G3DSA:3.20.20.190 8 245 3.5E-46 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_2055 effb0304a693a39126dee1df96b7e26f 276 SUPERFAMILY SSF51695 15 266 9.94E-50 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_0073 81167ce87ba7b13d9a8389791cc4656d 336 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 6.7E-79 T 12-10-2018 IPR006837 Divergent polysaccharide deacetylase YpsIP31758_0073 81167ce87ba7b13d9a8389791cc4656d 336 Gene3D G3DSA:3.20.20.370 22 239 7.4E-76 T 12-10-2018 YpsIP31758_0073 81167ce87ba7b13d9a8389791cc4656d 336 SUPERFAMILY SSF88713 24 238 6.23E-74 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_3881 d4cf90fd31b813b10be26cf62e8f9fb6 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 282 1.3E-82 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 YpsIP31758_3881 d4cf90fd31b813b10be26cf62e8f9fb6 373 SUPERFAMILY SSF102405 76 281 2.14E-41 T 12-10-2018 YpsIP31758_3881 d4cf90fd31b813b10be26cf62e8f9fb6 373 Pfam PF02481 DNA recombination-mediator protein A 68 274 4.9E-76 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 YpsIP31758_3881 d4cf90fd31b813b10be26cf62e8f9fb6 373 Gene3D G3DSA:3.40.50.450 2 285 5.0E-89 T 12-10-2018 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF48019 252 434 1.25E-70 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF16193 AAA C-terminal domain 188 267 4.0E-21 T 12-10-2018 IPR032423 AAA C-terminal domain YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.8E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.3710.10 346 447 1.3E-37 T 12-10-2018 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:3.40.50.300 1 164 2.5E-47 T 12-10-2018 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.8.60 165 240 3.6E-28 T 12-10-2018 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 4.4E-64 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 SMART SM00382 49 165 4.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.20.272.10 241 345 1.6E-43 T 12-10-2018 YpsIP31758_2594 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF52540 6 236 5.36E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0930 87ba9d2c797d4ef1b2d80cf52a0985e4 495 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 63 408 6.1E-86 T 12-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 YpsIP31758_0930 87ba9d2c797d4ef1b2d80cf52a0985e4 495 PIRSF PIRSF014753 38 467 6.1E-92 T 12-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 YpsIP31758_0930 87ba9d2c797d4ef1b2d80cf52a0985e4 495 PIRSF PIRSF014753 407 495 150.0 T 12-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 YpsIP31758_3285 14ff195fdb611b875a4b690a75c325a8 224 Pfam PF02734 DAK2 domain 43 215 2.3E-51 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 YpsIP31758_3285 14ff195fdb611b875a4b690a75c325a8 224 SMART SM01120 43 216 5.9E-67 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 YpsIP31758_3285 14ff195fdb611b875a4b690a75c325a8 224 Gene3D G3DSA:1.25.40.340 15 220 1.2E-53 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 YpsIP31758_3285 14ff195fdb611b875a4b690a75c325a8 224 SUPERFAMILY SSF101473 21 217 1.26E-50 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 YpsIP31758_3285 14ff195fdb611b875a4b690a75c325a8 224 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 22 215 1.7E-46 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 YpsIP31758_A0045 6ad0d51572fa3664f7c7f0813d8a47a8 303 SUPERFAMILY SSF52540 12 169 3.42E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0045 6ad0d51572fa3664f7c7f0813d8a47a8 303 Gene3D G3DSA:3.40.50.300 8 204 1.9E-24 T 12-10-2018 YpsIP31758_A0045 6ad0d51572fa3664f7c7f0813d8a47a8 303 SMART SM00382 9 134 5.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_A0045 6ad0d51572fa3664f7c7f0813d8a47a8 303 Pfam PF06414 Zeta toxin 12 166 7.2E-8 T 12-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 YpsIP31758_2406 eea113e70b6baebe8ab56acde6e5ecf6 446 Pfam PF07690 Major Facilitator Superfamily 30 364 5.2E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2406 eea113e70b6baebe8ab56acde6e5ecf6 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_2406 eea113e70b6baebe8ab56acde6e5ecf6 446 SUPERFAMILY SSF103473 13 438 3.27E-57 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2406 eea113e70b6baebe8ab56acde6e5ecf6 446 Gene3D G3DSA:1.20.1250.20 22 438 1.5E-52 T 12-10-2018 YpsIP31758_B0034 3211485a28e2e3cd70d8d68ae1273150 682 Pfam PF08401 Domain of unknown function (DUF1738) 19 138 7.4E-28 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 468 5.4E-196 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 381 390 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 SMART SM00382 191 374 5.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 SUPERFAMILY SSF52540 126 396 4.14E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 470 4.9E-187 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 Gene3D G3DSA:3.40.50.12240 19 472 1.0E-165 T 12-10-2018 YpsIP31758_2293 bdf3067a9e2bf7e8c2e9166c370dbce3 472 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 179 390 5.3E-71 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 Pfam PF01694 Rhomboid family 132 271 3.0E-30 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 48.352 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 2.3E-28 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 SUPERFAMILY SSF144091 94 271 2.09E-43 T 12-10-2018 YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 Gene3D G3DSA:3.30.70.2350 1 68 1.6E-21 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 Gene3D G3DSA:1.20.1540.10 92 271 9.5E-60 T 12-10-2018 IPR035952 Rhomboid-like superfamily YpsIP31758_3996 65d29456be7fba06f68c7e7737a98bb7 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 4.7E-121 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 Pfam PF02082 Transcriptional regulator 2 82 1.7E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.127 T 12-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 Gene3D G3DSA:1.10.10.10 1 136 1.1E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 SUPERFAMILY SSF46785 2 131 2.78E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3647 2cc48fa88d04779e8a7d158e65351eaa 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 1.0E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 105 17.929 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 4.0E-17 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 4.0E-17 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 4.0E-17 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 105 3.1E-26 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2289 a1601ae451c430e8ec5722af54f58afd 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 4 104 7.8E-26 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50465 338 438 3.21E-28 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:2.40.30.10 335 437 5.2E-28 T 12-10-2018 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 86 101 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50447 246 331 9.94E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 437 1.1E-202 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF52540 24 238 3.38E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 166 175 8.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 113 123 8.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 129 140 8.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 32 45 8.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 93 101 8.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 37 217 4.0E-16 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:3.40.50.300 10 243 2.5E-71 T 12-10-2018 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 478 52.985 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:2.40.30.10 244 332 1.2E-24 T 12-10-2018 YpsIP31758_3303 691c5723fa35090a05a1375e4fb29a10 478 Pfam PF00009 Elongation factor Tu GTP binding domain 29 230 4.8E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0539 d17fee42ed9c0ee2fd71da10b1a3862c 483 Pfam PF03553 Na+/H+ antiporter family 17 188 2.3E-10 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YpsIP31758_2834 c903d51151d13a2fe98b9c39684e274f 81 SUPERFAMILY SSF54285 1 81 3.18E-22 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YpsIP31758_2834 c903d51151d13a2fe98b9c39684e274f 81 Pfam PF02597 ThiS family 4 81 5.6E-21 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 YpsIP31758_2834 c903d51151d13a2fe98b9c39684e274f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.1E-24 T 12-10-2018 YpsIP31758_2834 c903d51151d13a2fe98b9c39684e274f 81 Gene3D G3DSA:3.10.20.30 1 81 1.3E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_2570 40113e1dfa0c525702236babd18563ad 297 SUPERFAMILY SSF56112 15 269 7.65E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_2570 40113e1dfa0c525702236babd18563ad 297 Pfam PF03881 Fructosamine kinase 32 273 6.1E-8 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 YpsIP31758_2570 40113e1dfa0c525702236babd18563ad 297 Gene3D G3DSA:3.90.1200.10 108 293 4.2E-9 T 12-10-2018 YpsIP31758_A0024 c4c60685c26cc780c232e412407c3830 174 Gene3D G3DSA:2.10.109.10 40 174 5.4E-13 T 12-10-2018 YpsIP31758_A0024 c4c60685c26cc780c232e412407c3830 174 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 13 173 9.4E-53 T 12-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 YpsIP31758_A0024 c4c60685c26cc780c232e412407c3830 174 SUPERFAMILY SSF51306 26 171 7.85E-20 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_A0024 c4c60685c26cc780c232e412407c3830 174 Pfam PF10502 Signal peptidase, peptidase S26 27 171 8.1E-38 T 12-10-2018 IPR019533 Peptidase S26 YpsIP31758_1589 3c8c3e826b9b647bccea1df2ab2736ad 129 Gene3D G3DSA:2.60.40.3230 24 128 8.8E-21 T 12-10-2018 IPR038483 YcfL-like superfamily YpsIP31758_1589 3c8c3e826b9b647bccea1df2ab2736ad 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 2.0E-26 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00679 Elongation factor G C-terminus 397 476 3.6E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.40.50.300 1 198 1.1E-69 T 12-10-2018 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.30.10 199 299 4.8E-35 T 12-10-2018 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 398 512 3.26E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF50447 151 299 1.04E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF52540 3 219 2.43E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.5E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.1E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.50.250 483 599 2.5E-126 T 12-10-2018 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.870 306 590 2.5E-126 T 12-10-2018 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.240 389 482 2.5E-126 T 12-10-2018 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 302 387 1.58E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 6.2E-289 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 YpsIP31758_0028 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 7.5E-26 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 Gene3D G3DSA:2.30.110.50 13 328 1.3E-89 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 Pfam PF05954 Phage late control gene D protein (GPD) 25 327 3.5E-71 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 Gene3D G3DSA:3.30.1920.30 221 284 1.3E-89 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 Gene3D G3DSA:2.40.50.230 351 453 2.6E-40 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 SUPERFAMILY SSF69255 361 447 1.12E-29 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 Gene3D G3DSA:3.55.50.10 94 185 1.3E-89 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 SUPERFAMILY SSF69349 438 753 4.47E-10 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 SUPERFAMILY SSF69279 190 360 1.7E-35 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 SUPERFAMILY SSF69279 14 180 4.12E-46 T 12-10-2018 YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 519 1.9E-154 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YpsIP31758_3429 81f55dc65382f38d44bfe545e1f7aeaa 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 502 3.7E-215 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YpsIP31758_1661 a9e15fe3628862baa359e94cc437ecc4 329 Pfam PF05229 Spore Coat Protein U domain 37 171 7.3E-14 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1661 a9e15fe3628862baa359e94cc437ecc4 329 Pfam PF05229 Spore Coat Protein U domain 196 325 2.3E-25 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1661 a9e15fe3628862baa359e94cc437ecc4 329 SMART SM00972 271 326 3.5E-12 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1661 a9e15fe3628862baa359e94cc437ecc4 329 SMART SM00972 104 172 1.1E-11 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 2.8E-57 T 12-10-2018 IPR006839 Ribosome-associated, YjgA YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 Gene3D G3DSA:1.10.60.30 35 109 1.5E-21 T 12-10-2018 YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 PIRSF PIRSF016183 9 182 1.8E-73 T 12-10-2018 IPR006839 Ribosome-associated, YjgA YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 Gene3D G3DSA:1.10.60.30 111 182 1.6E-29 T 12-10-2018 YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 24.021 T 12-10-2018 IPR006839 Ribosome-associated, YjgA YpsIP31758_0425 3bf17bb2e1aebfabf796823c2ae5cc12 182 SUPERFAMILY SSF158710 36 179 7.32E-53 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 Pfam PF00361 Proton-conducting membrane transporter 134 431 1.8E-70 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 9.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 9.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 9.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 9.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 9.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1465 4caf71055a6fa1e56db2a97a0852b28e 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 1.1E-181 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 230 4.0E-82 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 Gene3D G3DSA:3.40.50.1360 1 134 1.9E-43 T 12-10-2018 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 5 233 30.144 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 SUPERFAMILY SSF75445 131 215 1.57E-20 T 12-10-2018 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 Gene3D G3DSA:3.30.70.260 135 213 1.1E-27 T 12-10-2018 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 54 229 1.5E-58 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_2690 77106c983eab26da86bf47b5208541b4 236 SUPERFAMILY SSF100950 4 151 6.05E-42 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 SMART SM00829 11 313 7.6E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.40.50.720 125 292 1.2E-125 T 12-10-2018 YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF50129 1 145 2.2E-46 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF00107 Zinc-binding dehydrogenase 158 269 8.6E-16 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.2E-4 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 2.0E-136 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF51735 116 288 3.88E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0396 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.90.180.10 16 323 1.2E-125 T 12-10-2018 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.428 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 PIRSF PIRSF004750 6 281 4.1E-125 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 6.1E-127 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 SUPERFAMILY SSF55620 185 266 6.52E-10 T 12-10-2018 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 Pfam PF14489 QueF-like protein 195 269 1.1E-27 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 Gene3D G3DSA:3.30.1130.10 21 139 4.5E-43 T 12-10-2018 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 Gene3D G3DSA:3.30.1130.10 144 281 2.9E-60 T 12-10-2018 YpsIP31758_1004 9cbc6e8eeee5d66222b247e8b6ce563b 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 2.4E-47 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YpsIP31758_0565 b59d4a901e6322f43b5056d27fb2dbf7 416 Gene3D G3DSA:1.20.1740.10 4 415 2.9E-47 T 12-10-2018 YpsIP31758_0565 b59d4a901e6322f43b5056d27fb2dbf7 416 Pfam PF13520 Amino acid permease 8 412 5.2E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0565 b59d4a901e6322f43b5056d27fb2dbf7 416 PIRSF PIRSF006060 1 414 2.7E-51 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 SUPERFAMILY SSF103025 19 243 5.97E-65 T 12-10-2018 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 PIRSF PIRSF006487 21 293 2.9E-11 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 181 3.0E-7 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 Gene3D G3DSA:2.40.30.160 198 319 1.5E-44 T 12-10-2018 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 Gene3D G3DSA:3.30.70.1630 25 195 1.1E-59 T 12-10-2018 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 SUPERFAMILY SSF101790 245 326 2.68E-26 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.858 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 Gene3D G3DSA:3.30.70.1400 28 114 1.1E-59 T 12-10-2018 YpsIP31758_0872 9e3f2d97126a7bbdd1466a593de5521a 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.2E-26 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site YpsIP31758_3086 7fcfa21ca326bf82df3ba3448281cc8d 135 SUPERFAMILY SSF54637 2 129 3.37E-36 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_3086 7fcfa21ca326bf82df3ba3448281cc8d 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 2.0E-28 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YpsIP31758_3086 7fcfa21ca326bf82df3ba3448281cc8d 135 PIRSF PIRSF003230 1 134 8.7E-21 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YpsIP31758_3086 7fcfa21ca326bf82df3ba3448281cc8d 135 Gene3D G3DSA:3.10.129.10 1 133 1.5E-34 T 12-10-2018 YpsIP31758_3086 7fcfa21ca326bf82df3ba3448281cc8d 135 Pfam PF13279 Thioesterase-like superfamily 12 125 5.7E-16 T 12-10-2018 YpsIP31758_0597 63f8da9f19d92c632ae0aa02c2890810 277 Pfam PF00482 Type II secretion system (T2SS), protein F 135 263 6.5E-10 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_0408 26377419115d200dd589043e5ea4802e 910 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 3.2E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0408 26377419115d200dd589043e5ea4802e 910 Gene3D G3DSA:2.180.10.10 6 668 8.5E-234 T 12-10-2018 YpsIP31758_0408 26377419115d200dd589043e5ea4802e 910 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 668 4.8E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_3501 6d93f7e43d5899f4cbeb8dfd96d650a8 422 SUPERFAMILY SSF52151 22 274 2.17E-44 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YpsIP31758_3501 6d93f7e43d5899f4cbeb8dfd96d650a8 422 Pfam PF01734 Patatin-like phospholipase 27 195 1.2E-20 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YpsIP31758_3501 6d93f7e43d5899f4cbeb8dfd96d650a8 422 Gene3D G3DSA:3.40.1090.10 113 255 1.8E-6 T 12-10-2018 YpsIP31758_3501 6d93f7e43d5899f4cbeb8dfd96d650a8 422 Gene3D G3DSA:3.40.1090.10 16 112 3.6E-11 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PIRSF PIRSF002764 1 219 7.9E-88 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 1.6E-96 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 Pfam PF03379 CcmB protein 3 216 4.6E-93 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 7.3E-73 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 7.3E-73 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 7.3E-73 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 7.3E-73 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 7.3E-73 T 12-10-2018 YpsIP31758_1388 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 7.3E-73 T 12-10-2018 YpsIP31758_2064 231405e9c8d491ad986008ebef9115c2 133 PIRSF PIRSF005610 1 125 6.3E-29 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB YpsIP31758_2064 231405e9c8d491ad986008ebef9115c2 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 1.1E-44 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.2E-264 T 12-10-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 SUPERFAMILY SSF52540 3 229 9.78E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 Pfam PF00005 ABC transporter 278 433 1.5E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 SUPERFAMILY SSF52540 243 485 2.57E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 Gene3D G3DSA:3.40.50.300 3 240 3.4E-53 T 12-10-2018 YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 Gene3D G3DSA:3.40.50.300 256 509 7.9E-44 T 12-10-2018 YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 Pfam PF00005 ABC transporter 20 171 1.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 SMART SM00382 286 482 1.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 SMART SM00382 29 219 4.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4100 94261a1bef71ca30f30b3f29b5e41b93 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 3.3E-136 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 4.5E-134 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 Gene3D G3DSA:1.20.1740.10 2 400 2.0E-5 T 12-10-2018 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2774 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 5.4E-90 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_0361 fa2b195855540b207d426bab3c0d74aa 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 2.8E-136 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 YpsIP31758_0361 fa2b195855540b207d426bab3c0d74aa 306 PIRSF PIRSF026649 3 306 9.0E-93 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_0361 fa2b195855540b207d426bab3c0d74aa 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.4E-101 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YpsIP31758_0361 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.425 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 YpsIP31758_0361 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.758 T 12-10-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.9E-16 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 Gene3D G3DSA:3.30.1360.60 3 78 5.2E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 3.8E-211 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 Pfam PF00367 phosphotransferase system, EIIB 11 41 6.5E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 SUPERFAMILY SSF55604 10 81 3.27E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_0431 2b727cf27961dd47514ca4d229168461 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 3.3E-33 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 Gene3D G3DSA:3.40.50.1000 10 215 1.7E-65 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.1E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 3.1E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.1E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.1E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 SUPERFAMILY SSF56784 4 222 1.42E-60 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 37.842 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.3E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 192 3.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 Gene3D G3DSA:1.10.150.240 22 92 1.7E-65 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 1.5E-36 T 12-10-2018 YpsIP31758_3961 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 221 3.5E-81 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 YpsIP31758_0354 985e14c59d16e8149f8216aa4e9d926b 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 4.7E-189 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YpsIP31758_0354 985e14c59d16e8149f8216aa4e9d926b 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 3 379 78.563 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YpsIP31758_0354 985e14c59d16e8149f8216aa4e9d926b 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 3.9E-86 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YpsIP31758_0354 985e14c59d16e8149f8216aa4e9d926b 382 Gene3D G3DSA:3.20.20.30 1 362 6.1E-153 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 YpsIP31758_0354 985e14c59d16e8149f8216aa4e9d926b 382 SUPERFAMILY SSF51679 4 349 1.96E-97 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 Pfam PF00664 ABC transporter transmembrane region 26 300 5.5E-36 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 Pfam PF00005 ABC transporter 362 511 4.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 Gene3D G3DSA:3.40.50.300 336 594 3.6E-97 T 12-10-2018 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 SMART SM00382 371 557 7.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 SUPERFAMILY SSF52540 335 582 4.54E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 SUPERFAMILY SSF90123 10 324 1.15E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2965 8ab74a79d9e91a8c07788742bf726f8f 596 Gene3D G3DSA:1.20.1560.10 13 335 5.8E-112 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 Pfam PF00005 ABC transporter 41 202 1.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 2.2E-91 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 SUPERFAMILY SSF52540 24 261 1.45E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 Gene3D G3DSA:3.40.50.300 21 272 1.0E-61 T 12-10-2018 YpsIP31758_2799 5890e2ea2cc8bc3ae30004f061c29149 278 SMART SM00382 50 258 1.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_A0005 46e382e0fdf2b9c6455bfbeb3d6efc7e 168 Pfam PF01464 Transglycosylase SLT domain 24 142 1.3E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_A0005 46e382e0fdf2b9c6455bfbeb3d6efc7e 168 Gene3D G3DSA:1.10.530.10 18 161 3.7E-21 T 12-10-2018 YpsIP31758_A0005 46e382e0fdf2b9c6455bfbeb3d6efc7e 168 SUPERFAMILY SSF53955 17 150 4.44E-30 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 SMART SM01091 346 426 1.2E-27 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.30.465.10 347 428 1.9E-29 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 Pfam PF00571 CBS domain 287 333 0.003 T 12-10-2018 IPR000644 CBS domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 285 333 10.0 T 12-10-2018 IPR000644 CBS domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 221 270 2.1 T 12-10-2018 IPR000644 CBS domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.10.580.10 193 346 5.1E-33 T 12-10-2018 YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 Pfam PF03471 Transporter associated domain 347 425 1.6E-20 T 12-10-2018 IPR005170 Transporter-associated domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 Pfam PF01595 Domain of unknown function DUF21 6 197 3.8E-38 T 12-10-2018 IPR002550 CNNM, transmembrane domain YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF54631 200 335 5.97E-21 T 12-10-2018 YpsIP31758_3627 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF56176 344 429 2.13E-22 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_1341 2cade3670058443fb2b6a2a050ad66b5 221 Gene3D G3DSA:1.10.3480.10 27 221 3.1E-39 T 12-10-2018 YpsIP31758_1341 2cade3670058443fb2b6a2a050ad66b5 221 Pfam PF02613 Nitrate reductase delta subunit 69 177 1.7E-18 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone YpsIP31758_1341 2cade3670058443fb2b6a2a050ad66b5 221 SUPERFAMILY SSF89155 28 220 7.59E-48 T 12-10-2018 IPR036411 TorD-like superfamily YpsIP31758_1341 2cade3670058443fb2b6a2a050ad66b5 221 PIRSF PIRSF004690 25 220 3.9E-36 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 Gene3D G3DSA:2.40.30.170 220 318 4.7E-31 T 12-10-2018 YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 269 6.5E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 Gene3D G3DSA:1.10.287.470 97 187 5.4E-15 T 12-10-2018 YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 Gene3D G3DSA:2.40.420.20 319 397 4.7E-14 T 12-10-2018 YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 SUPERFAMILY SSF111369 54 265 4.45E-21 T 12-10-2018 YpsIP31758_1312 0f140a32867eb138ac1b29291be8828e 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 381 5.9E-48 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_3944 eb860674b6ca42a054f425a7c3c8b26a 135 SUPERFAMILY SSF82784 1 131 3.27E-42 T 12-10-2018 IPR036102 OsmC/Ohr superfamily YpsIP31758_3944 eb860674b6ca42a054f425a7c3c8b26a 135 Pfam PF02566 OsmC-like protein 30 127 3.8E-19 T 12-10-2018 IPR003718 OsmC/Ohr family YpsIP31758_3944 eb860674b6ca42a054f425a7c3c8b26a 135 Gene3D G3DSA:3.30.300.20 35 133 9.1E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta YpsIP31758_3944 eb860674b6ca42a054f425a7c3c8b26a 135 Gene3D G3DSA:2.20.25.10 1 34 4.4E-22 T 12-10-2018 YpsIP31758_0731 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.1E-35 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_0731 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 163 1.7E-79 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0731 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_0731 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_2506 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.1E-35 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_2506 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 163 1.7E-79 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_2506 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_2506 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_4142 0a26af72d6d03f006ae30861e162b92f 154 SUPERFAMILY SSF49764 30 134 7.32E-20 T 12-10-2018 IPR008978 HSP20-like chaperone YpsIP31758_4142 0a26af72d6d03f006ae30861e162b92f 154 Pfam PF00011 Hsp20/alpha crystallin family 39 134 1.2E-16 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain YpsIP31758_4142 0a26af72d6d03f006ae30861e162b92f 154 Gene3D G3DSA:2.60.40.790 32 135 1.8E-21 T 12-10-2018 IPR008978 HSP20-like chaperone YpsIP31758_4142 0a26af72d6d03f006ae30861e162b92f 154 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 49.04 T 12-10-2018 IPR022848 Small heat shock protein IbpB YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 1.9E-71 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 SUPERFAMILY SSF63848 122 227 5.36E-32 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 29.01 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.3E-34 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 4.7E-31 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 Gene3D G3DSA:3.30.750.120 1 113 2.1E-41 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily YpsIP31758_2010 2c23978e623e648918887d5d65a0a12d 228 Gene3D G3DSA:2.160.20.70 119 228 2.1E-29 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 YpsIP31758_2114 64f76613be414e544900f9ac4f6d075e 268 Gene3D G3DSA:3.40.630.40 3 265 1.2E-67 T 12-10-2018 YpsIP31758_2114 64f76613be414e544900f9ac4f6d075e 268 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 6.9E-63 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase YpsIP31758_2114 64f76613be414e544900f9ac4f6d075e 268 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 265 7.6E-127 T 12-10-2018 IPR010247 N-formylglutamate deformylase YpsIP31758_2114 64f76613be414e544900f9ac4f6d075e 268 SUPERFAMILY SSF53187 5 264 1.38E-75 T 12-10-2018 YpsIP31758_3286 d618d54fc80c6de567249b6c20261e18 333 Pfam PF02733 Dak1 domain 18 325 7.5E-111 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 YpsIP31758_3286 d618d54fc80c6de567249b6c20261e18 333 Gene3D G3DSA:3.30.1180.20 185 329 1.1E-47 T 12-10-2018 YpsIP31758_3286 d618d54fc80c6de567249b6c20261e18 333 Gene3D G3DSA:3.40.50.10440 12 184 5.5E-52 T 12-10-2018 YpsIP31758_3286 d618d54fc80c6de567249b6c20261e18 333 SUPERFAMILY SSF82549 11 329 1.39E-111 T 12-10-2018 YpsIP31758_1690 f86abf1752e1c8ea365bbf35274ac528 306 Gene3D G3DSA:1.10.3720.10 24 297 3.6E-63 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1690 f86abf1752e1c8ea365bbf35274ac528 306 SUPERFAMILY SSF161098 30 306 6.54E-71 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1690 f86abf1752e1c8ea365bbf35274ac528 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 300 2.6E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 Gene3D G3DSA:1.10.10.10 1 87 6.2E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 Pfam PF04337 Protein of unknown function, DUF480 5 156 1.5E-62 T 12-10-2018 IPR007432 Protein of unknown function DUF480 YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 SUPERFAMILY SSF46785 2 82 1.02E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 SUPERFAMILY SSF46785 88 169 1.51E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 Gene3D G3DSA:1.10.10.10 93 171 6.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2048 98857486a05f0b65872476beaaaea496 233 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 229 33.616 T 12-10-2018 IPR007432 Protein of unknown function DUF480 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.607 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 Pfam PF14622 Ribonuclease-III-like 20 142 2.2E-33 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 SMART SM00535 21 149 8.4E-55 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:1.10.1520.10 4 147 1.2E-43 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.0E-73 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:3.30.160.20 154 224 2.7E-20 T 12-10-2018 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF54768 109 223 2.2E-27 T 12-10-2018 YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.0E-15 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 SMART SM00358 156 224 1.5E-23 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain YpsIP31758_1136 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF69065 5 159 4.19E-49 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88659 122 183 1.63E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 1.4E-99 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.1740.10 1 120 1.5E-46 T 12-10-2018 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.10.10 121 191 1.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF08281 Sigma-70, region 4 129 180 7.5E-19 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88946 2 103 6.75E-30 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 1.1E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YpsIP31758_1129 5f1094738f6cca4777a1a31598f0e882 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YpsIP31758_0635 74d7b44e839ed5668ff4ef3a9e58dd95 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 139 8.6E-26 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YpsIP31758_0635 74d7b44e839ed5668ff4ef3a9e58dd95 145 Pfam PF02050 Flagellar FliJ protein 17 136 5.6E-7 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YpsIP31758_3033 0ecb25fd48b049f996c628e5743398e0 404 Gene3D G3DSA:1.20.1250.20 13 202 1.7E-21 T 12-10-2018 YpsIP31758_3033 0ecb25fd48b049f996c628e5743398e0 404 Gene3D G3DSA:1.20.1250.20 214 401 9.0E-19 T 12-10-2018 YpsIP31758_3033 0ecb25fd48b049f996c628e5743398e0 404 SUPERFAMILY SSF103473 17 398 4.45E-56 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3033 0ecb25fd48b049f996c628e5743398e0 404 Pfam PF07690 Major Facilitator Superfamily 30 260 1.1E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Pfam PF08676 MutL C terminal dimerisation domain 455 584 1.1E-26 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Gene3D G3DSA:2.30.42.20 455 630 2.9E-69 T 12-10-2018 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.1E-38 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 SMART SM01340 212 330 7.6E-57 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.5E-12 T 12-10-2018 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Gene3D G3DSA:3.30.1370.100 499 587 2.9E-69 T 12-10-2018 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 SUPERFAMILY SSF54211 191 330 4.55E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 SUPERFAMILY SSF55874 1 204 1.17E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Gene3D G3DSA:3.30.230.10 217 329 3.8E-41 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 SUPERFAMILY SSF118116 453 631 2.09E-43 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 632 26.084 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 SMART SM00853 458 593 2.2E-14 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site YpsIP31758_3655 a6f888e10f01bbc01c4e3fa48e14de85 635 Gene3D G3DSA:3.30.565.10 1 216 1.2E-71 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1292 1dc7eb0b3083ffed83b4224ac04af7b4 299 SUPERFAMILY SSF54909 1 297 5.9E-91 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_1292 1dc7eb0b3083ffed83b4224ac04af7b4 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 2.2E-85 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 YpsIP31758_1292 1dc7eb0b3083ffed83b4224ac04af7b4 299 Pfam PF04261 Dyp-type peroxidase family 5 294 2.2E-92 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 YpsIP31758_2590 0e97b64c40203fc8f83f5c6b109acd34 224 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 53 115 9.6E-8 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 YpsIP31758_2180 fa1ec57a5dbe28a527f02239a0c78b8f 358 SUPERFAMILY SSF52200 136 238 6.41E-15 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily YpsIP31758_2180 fa1ec57a5dbe28a527f02239a0c78b8f 358 Pfam PF13676 TIR domain 139 240 2.2E-19 T 12-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YpsIP31758_2180 fa1ec57a5dbe28a527f02239a0c78b8f 358 Gene3D G3DSA:3.40.50.10140 131 260 2.5E-16 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-35 T 12-10-2018 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_0385 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 6.9E-47 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 SUPERFAMILY SSF55874 4 214 2.88E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 172 189 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 120 142 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 26 48 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 75 92 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 190 208 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 93 110 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PRINTS PR00775 90kDa heat shock protein signature 5 25 3.1E-65 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Pfam PF00183 Hsp90 protein 213 621 1.4E-126 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 SMART SM00387 27 184 4.1E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 PIRSF PIRSF002583 1 622 1.4E-218 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 SUPERFAMILY SSF54211 228 483 1.97E-100 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Gene3D G3DSA:3.30.565.10 1 216 2.9E-79 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Gene3D G3DSA:3.40.50.11260 400 490 2.0E-36 T 12-10-2018 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Gene3D G3DSA:3.30.230.80 227 399 8.0E-71 T 12-10-2018 YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.1E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Gene3D G3DSA:1.20.120.790 491 622 8.2E-47 T 12-10-2018 IPR037196 HSP90, C-terminal domain YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 SUPERFAMILY SSF110942 508 621 9.68E-36 T 12-10-2018 IPR037196 HSP90, C-terminal domain YpsIP31758_3055 f8202b9bbcea01bbcf90ceac464b3469 622 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 621 32.917 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YpsIP31758_0109 3ba4822792f1ee183c4e8db8bda7b287 194 Pfam PF14016 Protein of unknown function (DUF4232) 50 172 1.0E-12 T 12-10-2018 IPR025326 Protein of unknown function DUF4232 YpsIP31758_2973 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 34 282 1.8E-73 T 12-10-2018 YpsIP31758_2973 ec3fb978818ce036a4ff329ee1dd94f4 309 SUPERFAMILY SSF53822 22 300 5.65E-71 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2973 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 122 262 1.8E-73 T 12-10-2018 YpsIP31758_2973 ec3fb978818ce036a4ff329ee1dd94f4 309 Pfam PF13407 Periplasmic binding protein domain 24 277 1.1E-54 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_0649 58feb54bc2978ecabf3693d575ce1f2c 305 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 2.0E-7 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_0649 58feb54bc2978ecabf3693d575ce1f2c 305 Gene3D G3DSA:1.20.1330.10 40 251 1.9E-31 T 12-10-2018 YpsIP31758_0649 58feb54bc2978ecabf3693d575ce1f2c 305 SUPERFAMILY SSF64518 1 305 6.02E-42 T 12-10-2018 YpsIP31758_1118 770e65b99a96b0442c8998b6fdf2dee8 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 2.2E-88 T 12-10-2018 IPR010374 Protein of unknown function DUF969 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 2046 2139 3.34E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1036 1130 7.06E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 733 827 1.07E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 PRINTS PR01369 Intimin signature 456 468 1.0E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 PRINTS PR01369 Intimin signature 369 388 1.0E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 PRINTS PR01369 Intimin signature 273 288 1.0E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 PRINTS PR01369 Intimin signature 301 320 1.0E-11 T 12-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1844 1937 3.34E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.40.160.160 184 428 2.0E-111 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 736 823 1.3E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1140 1227 5.2E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 938 1025 4.1E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 2049 2136 3.3E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1847 1934 3.3E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 2352 2439 3.3E-11 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 534 618 0.0092 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 635 722 5.5E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 2251 2338 3.8E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1342 1429 1.3E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 2453 2540 6.5E-7 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 2150 2237 4.6E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1544 1631 4.9E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1645 1732 2.5E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1039 1126 7.3E-8 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 837 924 3.3E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1443 1530 1.3E-10 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1241 1328 5.7E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1746 1833 1.3E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00634 1948 2035 1.3E-9 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1945 2039 2.62E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2619 2773 4.1E-42 T 12-10-2018 IPR008541 Protein of unknown function DUF823 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1541 1635 1.0E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1238 1332 1.28E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1642 1736 9.68E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 834 928 1.83E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1137 1231 2.35E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1440 1534 6.47E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1644 1737 1.1E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 2250 2343 3.3E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1038 1131 8.6E-20 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1543 1636 2.3E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 735 828 6.4E-21 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1341 1434 7.2E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 532 626 1.7E-19 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 634 727 1.7E-20 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1240 1333 7.6E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 937 1030 2.0E-21 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 2351 2444 1.1E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 2149 2242 4.7E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 2452 2545 2.4E-21 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 2048 2141 5.2E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1442 1535 1.5E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1745 1838 2.0E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1846 1939 5.2E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 836 929 5.5E-23 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1947 2040 2.0E-22 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF09134 Invasin, domain 3 1139 1232 1.1E-21 T 12-10-2018 IPR015217 Invasin, domain 3 YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1339 1432 5.49E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 1743 1837 2.62E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Pfam PF11924 Inverse autotransporter, beta-domain 154 421 1.0E-115 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 2147 2241 2.35E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 2248 2342 4.71E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 529 626 2.5E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 2347 2444 1.2E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1539 1636 3.3E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1640 1737 1.8E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1337 1433 4.5E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1943 2040 5.7E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1842 1938 1.5E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1034 1130 9.9E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1236 1333 8.4E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 832 929 7.8E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 2145 2242 4.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 2448 2545 2.0E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1135 1231 3.5E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1438 1535 3.6E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 731 827 1.1E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 933 1030 3.1E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 1741 1838 5.7E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 630 726 1.4E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 2044 2140 1.5E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 Gene3D G3DSA:2.60.40.10 2246 2343 4.4E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 2350 2428 81.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1643 1721 74.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1845 1923 81.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 2047 2125 81.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1441 1519 51.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 2451 2529 36.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1239 1317 55.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 2235 2327 22.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1946 2024 150.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1744 1822 150.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 835 913 62.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 2148 2226 170.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1542 1620 160.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SMART SM00409 1340 1418 51.0 T 12-10-2018 IPR003599 Immunoglobulin subtype YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 632 725 3.66E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 2349 2443 3.92E-22 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 935 1029 3.73E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 2450 2543 3.92E-21 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0608 ec06a51e2e8d11bde1d4d4c95b5b2b30 2795 SUPERFAMILY SSF49373 531 625 3.66E-20 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments YpsIP31758_0287 be3f866ea3256aad93926d701766fb6d 177 Pfam PF12724 Flavodoxin domain 4 151 3.8E-56 T 12-10-2018 IPR026816 Flavodoxin domain YpsIP31758_0287 be3f866ea3256aad93926d701766fb6d 177 SUPERFAMILY SSF52218 1 169 5.9E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0287 be3f866ea3256aad93926d701766fb6d 177 Gene3D G3DSA:3.40.50.360 1 110 1.4E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0287 be3f866ea3256aad93926d701766fb6d 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YpsIP31758_1363 058ac7ea06d9a9f3fa305c34fa3cf9d0 181 SUPERFAMILY SSF49401 27 181 5.47E-24 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1363 058ac7ea06d9a9f3fa305c34fa3cf9d0 181 Gene3D G3DSA:2.60.40.1090 24 181 4.3E-27 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_1363 058ac7ea06d9a9f3fa305c34fa3cf9d0 181 Pfam PF16970 Type-1 fimbrial protein, A 52 181 1.6E-12 T 12-10-2018 IPR039458 Type-1 fimbrial protein, A YpsIP31758_1914 fa2b0ab0f7b1552452694849ba9a5ea7 99 Gene3D G3DSA:1.10.1220.10 1 47 8.6E-7 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_1914 fa2b0ab0f7b1552452694849ba9a5ea7 99 SUPERFAMILY SSF47598 1 44 4.08E-8 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 Gene3D G3DSA:1.20.225.30 243 312 2.0E-33 T 12-10-2018 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 PIRSF PIRSF006621 1 312 4.1E-82 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 Gene3D G3DSA:3.20.20.70 1 242 6.7E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.76 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 SUPERFAMILY SSF51395 1 302 8.79E-71 T 12-10-2018 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 290 1.6E-88 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_2808 faed05bd1fa6657af2184377ad238aeb 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_A0035 1d52be74bfc0f9aa17702b4ae01a84c2 79 SUPERFAMILY SSF47413 1 53 2.5E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_A0035 1d52be74bfc0f9aa17702b4ae01a84c2 79 Gene3D G3DSA:1.10.260.40 2 70 1.5E-12 T 12-10-2018 YpsIP31758_A0035 1d52be74bfc0f9aa17702b4ae01a84c2 79 Pfam PF01381 Helix-turn-helix 6 37 5.6E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:1.20.1090.10 183 385 6.7E-48 T 12-10-2018 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 SUPERFAMILY SSF56796 1 384 1.22E-107 T 12-10-2018 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 8.0E-90 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 YpsIP31758_0587 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:3.40.50.1970 1 182 1.1E-48 T 12-10-2018 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 Gene3D G3DSA:3.30.70.580 63 227 2.7E-61 T 12-10-2018 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 SUPERFAMILY SSF55174 1 55 2.21E-11 T 12-10-2018 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 Gene3D G3DSA:3.30.70.1560 128 209 2.7E-61 T 12-10-2018 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 SMART SM00363 1 69 3.0E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 6.5E-58 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 SUPERFAMILY SSF55120 61 227 2.24E-47 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 Pfam PF01479 S4 domain 1 46 6.0E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.2E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2718 eb9a9e62570b188a4832b8ca77542ce0 235 Gene3D G3DSA:3.10.290.10 1 62 8.1E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_1782 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Gene3D G3DSA:1.10.3720.10 85 293 3.4E-17 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1782 3dbc9365b6e59ed26ac7fe7c4c818bff 296 SUPERFAMILY SSF161098 90 277 6.28E-21 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1782 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 1.0E-6 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YpsIP31758_1782 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 8.6E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 191 242 5.24E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 SMART SM00342 208 291 2.5E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 179 7.8E-41 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 244 290 1.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF12833 Helix-turn-helix domain 214 289 9.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0588 72a32b2082a4eb093c03b93fa4d7c6e4 297 Gene3D G3DSA:1.10.10.60 187 295 6.9E-29 T 12-10-2018 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 Pfam PF02050 Flagellar FliJ protein 19 141 1.8E-36 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.7E-34 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PIRSF PIRSF019404 1 147 1.6E-51 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2294 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 6.4E-41 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_3848 be9beb44b23a977f16ba3a6198c1b75c 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.086 T 12-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 YpsIP31758_3848 be9beb44b23a977f16ba3a6198c1b75c 234 Pfam PF04493 Endonuclease V 15 207 1.2E-71 T 12-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 YpsIP31758_3848 be9beb44b23a977f16ba3a6198c1b75c 234 Gene3D G3DSA:3.30.2170.10 1 215 2.3E-80 T 12-10-2018 YpsIP31758_2754 51bebf772d97dfa8918fee2551b926ac 342 Pfam PF12706 Beta-lactamase superfamily domain 103 299 3.0E-41 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2754 51bebf772d97dfa8918fee2551b926ac 342 Gene3D G3DSA:3.60.15.10 60 342 1.8E-85 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2754 51bebf772d97dfa8918fee2551b926ac 342 PIRSF PIRSF038896 2 342 1.3E-99 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 YpsIP31758_2754 51bebf772d97dfa8918fee2551b926ac 342 SUPERFAMILY SSF56281 85 305 3.14E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.6E-106 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 Gene3D G3DSA:3.40.190.10 211 525 2.0E-196 T 12-10-2018 YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 Gene3D G3DSA:3.90.76.10 42 210 2.0E-196 T 12-10-2018 YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 Gene3D G3DSA:3.10.105.10 292 510 2.0E-196 T 12-10-2018 YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 SUPERFAMILY SSF53850 29 534 6.52E-161 T 12-10-2018 YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 PIRSF PIRSF002741 23 535 2.1E-118 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_4075 e076d1b72ef9031601a32234600dd6b5 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 Pfam PF00266 Aminotransferase class-V 4 349 8.7E-67 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 SUPERFAMILY SSF53383 1 359 3.07E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 Gene3D G3DSA:3.40.640.10 17 257 6.3E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 4.1E-157 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.743 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 PIRSF PIRSF000525 1 361 4.3E-151 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YpsIP31758_2583 a5fddc30d53a01d9fbb4e4758d42fc61 361 Gene3D G3DSA:3.90.1150.10 258 361 2.6E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1326 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 81 2.3E-16 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 YpsIP31758_1326 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 2.5E-59 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 YpsIP31758_1326 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07670 Nucleoside recognition 92 190 1.3E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YpsIP31758_1460 56fc6812360c8a20be42c9fe714225e0 325 Pfam PF00146 NADH dehydrogenase 17 316 3.8E-120 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1460 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1460 56fc6812360c8a20be42c9fe714225e0 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.932 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1460 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 Gene3D G3DSA:1.20.200.10 198 509 2.9E-124 T 12-10-2018 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 508 2.0E-217 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 Pfam PF00221 Aromatic amino acid lyase 11 470 4.7E-184 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 SUPERFAMILY SSF48557 3 506 9.42E-191 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 Gene3D G3DSA:1.10.275.10 2 197 9.1E-70 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.735 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_4085 2c0a41d7ca39c4782d92ef2bc8f7319f 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 Gene3D G3DSA:1.10.3720.10 14 283 6.3E-44 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 SUPERFAMILY SSF161098 300 586 6.35E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 276 1.4E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 577 5.5E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 Gene3D G3DSA:1.10.3720.10 343 588 1.5E-28 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1259 4c7b851931abb441dc2ddc55af9b9095 589 SUPERFAMILY SSF161098 5 282 1.78E-45 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 475 5.6E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 Gene3D G3DSA:3.30.450.140 42 193 3.8E-65 T 12-10-2018 IPR038429 PhoQ Sensor superfamily YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 7.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 7.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 SMART SM00387 373 479 1.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 SMART SM00388 264 328 0.0017 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 Gene3D G3DSA:1.10.287.130 214 321 3.6E-8 T 12-10-2018 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 Pfam PF08918 PhoQ Sensor 8 185 4.2E-89 T 12-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 SUPERFAMILY SSF47384 247 322 6.28E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 SUPERFAMILY SSF55874 335 475 2.75E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_1607 c4e65edc43b0a4d30cc8a679442fef6b 484 Gene3D G3DSA:3.30.565.10 334 483 4.3E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PIRSF PIRSF001013 1 157 1.1E-71 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 115 134 4.6E-31 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 54 71 4.6E-31 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 74 91 4.6E-31 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 137 155 4.6E-31 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 PRINTS PR00117 Barnase signature 94 112 4.6E-31 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 Pfam PF00545 ribonuclease 67 154 1.8E-24 T 12-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 SUPERFAMILY SSF53933 50 156 2.24E-38 T 12-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YpsIP31758_0423 ded49b1facbe96f90a0a85f188d88c58 157 Gene3D G3DSA:3.10.450.30 43 157 6.9E-45 T 12-10-2018 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 Gene3D G3DSA:3.30.930.10 8 327 8.7E-125 T 12-10-2018 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.5E-107 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-117 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.807 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.2E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YpsIP31758_1716 fe1e10c304967e732d3ff057ff1fda42 327 SUPERFAMILY SSF55681 92 327 2.7E-81 T 12-10-2018 YpsIP31758_0049 5ffaa85c7a0fbc0dce7b198a9ec2cb0d 383 Pfam PF06048 Domain of unknown function (DUF927) 140 369 1.0E-44 T 12-10-2018 IPR009270 Domain of unknown function DUF927 YpsIP31758_0049 5ffaa85c7a0fbc0dce7b198a9ec2cb0d 383 Pfam PF08346 AntA/AntB antirepressor 55 129 3.2E-25 T 12-10-2018 IPR013557 AntA/AntB antirepressor YpsIP31758_2322 0081367807912203c08a3b28e684d3f9 228 Gene3D G3DSA:2.30.30.910 88 222 5.8E-35 T 12-10-2018 YpsIP31758_2322 0081367807912203c08a3b28e684d3f9 228 Pfam PF13861 FlgD Tudor-like domain 87 225 5.8E-16 T 12-10-2018 IPR025963 FlgD Tudor-like domain YpsIP31758_2322 0081367807912203c08a3b28e684d3f9 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 78 1.1E-23 T 12-10-2018 IPR005648 Flagellar hook capping protein YpsIP31758_2322 0081367807912203c08a3b28e684d3f9 228 Gene3D G3DSA:2.60.40.4070 104 194 5.8E-35 T 12-10-2018 YpsIP31758_2322 0081367807912203c08a3b28e684d3f9 228 Pfam PF13860 FlgD Ig-like domain 117 186 6.9E-24 T 12-10-2018 IPR025965 FlgD Ig-like domain YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 115 7.0E-26 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 Pfam PF01478 Type IV leader peptidase family 126 233 9.1E-24 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 230 1.4E-20 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 203 214 1.4E-20 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 135 152 1.4E-20 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial YpsIP31758_0963 a9e723391d7f27d18ddc028ca700919f 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 192 202 1.4E-20 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial YpsIP31758_3349 c811d7e3742f4698797e94d902cbb144 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3349 c811d7e3742f4698797e94d902cbb144 308 Gene3D G3DSA:3.40.50.300 1 235 3.3E-66 T 12-10-2018 YpsIP31758_3349 c811d7e3742f4698797e94d902cbb144 308 Pfam PF00005 ABC transporter 21 165 1.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3349 c811d7e3742f4698797e94d902cbb144 308 SUPERFAMILY SSF52540 3 234 1.63E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3349 c811d7e3742f4698797e94d902cbb144 308 SMART SM00382 30 213 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3077 07cf81c6a811830fe7f94b0274282f8e 430 Gene3D G3DSA:1.10.3430.10 25 409 1.3E-145 T 12-10-2018 IPR029020 Ammonium/urea transporter YpsIP31758_3077 07cf81c6a811830fe7f94b0274282f8e 430 ProSitePatterns PS01219 Ammonium transporters signature. 184 209 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 YpsIP31758_3077 07cf81c6a811830fe7f94b0274282f8e 430 Pfam PF00909 Ammonium Transporter Family 35 428 3.8E-126 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YpsIP31758_3077 07cf81c6a811830fe7f94b0274282f8e 430 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 1.5E-136 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YpsIP31758_3077 07cf81c6a811830fe7f94b0274282f8e 430 SUPERFAMILY SSF111352 29 409 1.28E-127 T 12-10-2018 YpsIP31758_0016 778c1e0d89001e99bb6b14bfc0f9d08c 177 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 143 6.3E-47 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YpsIP31758_0016 778c1e0d89001e99bb6b14bfc0f9d08c 177 Gene3D G3DSA:3.40.50.300 10 165 3.2E-58 T 12-10-2018 YpsIP31758_0016 778c1e0d89001e99bb6b14bfc0f9d08c 177 SUPERFAMILY SSF52540 7 169 1.14E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0016 778c1e0d89001e99bb6b14bfc0f9d08c 177 Gene3D G3DSA:2.20.25.120 53 85 3.2E-58 T 12-10-2018 YpsIP31758_0016 778c1e0d89001e99bb6b14bfc0f9d08c 177 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 168 3.1E-43 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 SUPERFAMILY SSF52096 25 283 4.66E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 Pfam PF01039 Carboxyl transferase domain 95 239 8.0E-18 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.356 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 3.7E-148 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 Gene3D G3DSA:3.90.226.10 25 287 5.3E-88 T 12-10-2018 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1422 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1236 a7eb306c9077944e09e5665c93cc0ec2 428 Pfam PF00860 Permease family 16 382 7.6E-105 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1236 a7eb306c9077944e09e5665c93cc0ec2 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 1.4E-127 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 YpsIP31758_1236 a7eb306c9077944e09e5665c93cc0ec2 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 YpsIP31758_0744 bfa02f9d71366544e53c8bd14e484286 95 Pfam PF01381 Helix-turn-helix 39 90 1.9E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0744 bfa02f9d71366544e53c8bd14e484286 95 SUPERFAMILY SSF47413 27 89 3.66E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0744 bfa02f9d71366544e53c8bd14e484286 95 Gene3D G3DSA:1.10.260.40 12 95 2.9E-17 T 12-10-2018 YpsIP31758_0744 bfa02f9d71366544e53c8bd14e484286 95 SMART SM00530 38 93 1.9E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3697 b1329f7e251b7f6cba8d56d13d16e277 296 SUPERFAMILY SSF56349 31 280 8.83E-10 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_3697 b1329f7e251b7f6cba8d56d13d16e277 296 Pfam PF12834 Phage integrase, N-terminal 1 90 1.9E-35 T 12-10-2018 IPR024457 Putative integrase, N-terminal YpsIP31758_3697 b1329f7e251b7f6cba8d56d13d16e277 296 Pfam PF12835 Integrase 104 250 1.6E-56 T 12-10-2018 IPR024456 Integrase catalytic domain, putative YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.0E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.0E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.0E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.0E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.0E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.2E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 Pfam PF01467 Cytidylyltransferase-like 6 134 6.1E-23 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.549 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.1E-58 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 SUPERFAMILY SSF52374 3 156 5.36E-44 T 12-10-2018 YpsIP31758_0065 c4417662664b844543cf3e688cc80122 159 Gene3D G3DSA:3.40.50.620 1 159 2.8E-56 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 2 250 1.4E-57 T 12-10-2018 YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 12 236 5.52E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 29 178 3.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 280 434 5.6E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 288 483 2.1 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 38 233 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 254 494 7.17E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2466 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 251 503 1.1E-37 T 12-10-2018 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Pfam PF01476 LysM domain 353 394 6.8E-13 T 12-10-2018 IPR018392 LysM domain YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Pfam PF01476 LysM domain 406 449 1.7E-9 T 12-10-2018 IPR018392 LysM domain YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 SUPERFAMILY SSF54106 352 395 3.79E-10 T 12-10-2018 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Gene3D G3DSA:1.10.530.10 103 257 7.9E-33 T 12-10-2018 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Gene3D G3DSA:3.10.350.10 403 452 7.2E-14 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 SUPERFAMILY SSF53955 105 256 7.74E-42 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 SMART SM00257 405 450 3.3E-9 T 12-10-2018 IPR018392 LysM domain YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 SMART SM00257 352 396 1.7E-12 T 12-10-2018 IPR018392 LysM domain YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Pfam PF01464 Transglycosylase SLT domain 113 220 1.1E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 SUPERFAMILY SSF54106 404 450 1.1E-9 T 12-10-2018 YpsIP31758_1051 b19cd811ee4d2d3d2f220c66b3c2a4fe 459 Gene3D G3DSA:3.10.350.10 348 402 9.6E-15 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 59 127 2.3E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 SUPERFAMILY SSF101801 56 131 2.88E-19 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 58 74 1.8E-16 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 104 119 1.8E-16 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 91 1.8E-16 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 104 1.8E-16 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 56 130 1.5E-25 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_0627 2e4400719a6d9463804bf476557fdfc1 137 Gene3D G3DSA:2.30.330.10 44 135 2.7E-24 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.7E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.7E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.7E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.7E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.5E-26 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3599 4e9233c3ab1cc6066fe66ea1f11db51f 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 9.2E-22 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.2E-149 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:3.30.930.10 1 214 5.3E-110 T 12-10-2018 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 SUPERFAMILY SSF55681 8 292 4.91E-134 T 12-10-2018 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:1.20.58.180 215 297 7.8E-34 T 12-10-2018 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.449 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.2E-174 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_4131 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:1.10.1040.10 168 290 2.3E-44 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF51735 1 167 7.99E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.8E-35 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 290 4.4E-84 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF48179 168 289 2.14E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.6E-23 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain YpsIP31758_3106 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:3.40.50.720 1 167 2.2E-52 T 12-10-2018 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 Gene3D G3DSA:3.30.70.580 1 104 6.8E-40 T 12-10-2018 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 Gene3D G3DSA:3.30.70.660 105 242 9.1E-50 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.3E-10 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 Pfam PF01416 tRNA pseudouridine synthase 142 244 1.2E-28 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.5E-75 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.516 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 SUPERFAMILY SSF55120 2 257 9.64E-91 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1420 ea92176fe725f99da662afeba2353704 264 PIRSF PIRSF001430 1 252 3.5E-77 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3439 808a6acd1a87a26b5436001cb1d24e59 206 Pfam PF00849 RNA pseudouridylate synthase 9 156 1.6E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3439 808a6acd1a87a26b5436001cb1d24e59 206 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_3439 808a6acd1a87a26b5436001cb1d24e59 206 Gene3D G3DSA:3.30.2350.10 1 206 6.1E-72 T 12-10-2018 YpsIP31758_3439 808a6acd1a87a26b5436001cb1d24e59 206 SUPERFAMILY SSF55120 3 203 6.08E-62 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_2125 5b9249e7be1416a06c33128d9a16134b 262 SUPERFAMILY SSF52540 57 239 7.09E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2125 5b9249e7be1416a06c33128d9a16134b 262 Pfam PF02562 PhoH-like protein 57 261 1.8E-77 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 YpsIP31758_2125 5b9249e7be1416a06c33128d9a16134b 262 Gene3D G3DSA:3.40.50.300 54 262 2.0E-65 T 12-10-2018 YpsIP31758_1609 d5d5a67d4ba7b38991ed5026e0d8624a 207 Pfam PF13505 Outer membrane protein beta-barrel domain 8 207 8.6E-10 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel YpsIP31758_1609 d5d5a67d4ba7b38991ed5026e0d8624a 207 SUPERFAMILY SSF56925 19 167 1.33E-9 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Gene3D G3DSA:3.30.465.10 106 268 5.5E-76 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Gene3D G3DSA:3.30.70.610 269 346 4.8E-18 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Gene3D G3DSA:3.30.70.610 361 434 3.3E-18 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 SUPERFAMILY SSF55103 275 567 3.49E-112 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 1.2E-144 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Pfam PF01565 FAD binding domain 47 172 2.9E-8 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Gene3D G3DSA:3.30.43.10 5 103 7.5E-11 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 58.527 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 Gene3D G3DSA:3.30.1370.20 435 519 1.2E-40 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 SUPERFAMILY SSF56176 12 271 1.42E-70 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_2805 546aeff90e82e25e4b9ce79b0a73ddd1 570 PIRSF PIRSF000101 4 569 7.4E-289 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 YpsIP31758_1296 385a023017f1c6f4a848b9069f18dc14 156 SUPERFAMILY SSF51197 1 154 4.67E-47 T 12-10-2018 YpsIP31758_1296 385a023017f1c6f4a848b9069f18dc14 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.0E-41 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_1296 385a023017f1c6f4a848b9069f18dc14 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.3E-46 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_1296 385a023017f1c6f4a848b9069f18dc14 156 Gene3D G3DSA:2.60.120.370 1 154 9.8E-45 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 6.2E-127 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 148 290 9.5E-137 T 12-10-2018 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.1E-30 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 SMART SM01400 4 121 5.7E-76 T 12-10-2018 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 SUPERFAMILY SSF53271 69 306 2.5E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 YpsIP31758_2070 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 7 302 9.5E-137 T 12-10-2018 YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 Pfam PF00072 Response regulator receiver domain 10 120 4.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 56.188 T 12-10-2018 IPR028616 Regulator of RpoS YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 Gene3D G3DSA:3.60.40.10 146 321 3.2E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 SMART SM00448 8 120 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 Gene3D G3DSA:3.40.50.2300 2 130 2.7E-31 T 12-10-2018 YpsIP31758_1969 fded2784779508d47214103ec492bb23 338 SUPERFAMILY SSF52172 7 161 2.28E-32 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_0438 a244dc774694a26f5d2637ed2bd321f3 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.858 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 YpsIP31758_0438 a244dc774694a26f5d2637ed2bd321f3 284 SUPERFAMILY SSF52540 2 151 3.19E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0438 a244dc774694a26f5d2637ed2bd321f3 284 Pfam PF03668 P-loop ATPase protein family 1 282 6.1E-144 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 YpsIP31758_0438 a244dc774694a26f5d2637ed2bd321f3 284 PIRSF PIRSF005052 1 284 5.7E-114 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 YpsIP31758_A0009 3420797b67ecb521e4a866d089554112 115 PIRSF PIRSF002070 1 115 2.3E-12 T 12-10-2018 YpsIP31758_A0009 3420797b67ecb521e4a866d089554112 115 SUPERFAMILY SSF50249 5 106 2.54E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_A0009 3420797b67ecb521e4a866d089554112 115 Gene3D G3DSA:2.40.50.140 3 115 5.2E-12 T 12-10-2018 YpsIP31758_A0009 3420797b67ecb521e4a866d089554112 115 Pfam PF00436 Single-strand binding protein family 6 103 6.4E-8 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 SMART SM00434 12 462 2.1E-235 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF56719 32 483 4.84E-153 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:1.10.268.10 345 484 2.2E-45 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 12-10-2018 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 33.855 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:2.120.10.90 501 726 6.9E-10 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 2.0E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 634 5.6E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.90.199.10 31 162 7.0E-59 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF101904 498 741 6.02E-51 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 9.0E-133 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YpsIP31758_0581 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.30.1360.40 163 344 5.5E-71 T 12-10-2018 YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 Gene3D G3DSA:3.40.50.720 1 248 1.5E-75 T 12-10-2018 YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 246 5.2E-62 T 12-10-2018 YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 SUPERFAMILY SSF51735 2 247 3.04E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2523 6ba3fcce45a676dbac875e038805e275 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_4047 9c270b983f43cc5a72b3ad860b476f9d 682 Gene3D G3DSA:1.10.1370.40 13 675 1.4E-267 T 12-10-2018 YpsIP31758_4047 9c270b983f43cc5a72b3ad860b476f9d 682 Gene3D G3DSA:1.10.1370.10 140 610 1.4E-267 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YpsIP31758_4047 9c270b983f43cc5a72b3ad860b476f9d 682 SUPERFAMILY SSF55486 1 677 4.4E-215 T 12-10-2018 YpsIP31758_4047 9c270b983f43cc5a72b3ad860b476f9d 682 Pfam PF01432 Peptidase family M3 222 677 2.9E-168 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 YpsIP31758_0549 408088b4d0b49ce7bb54b5f954d4888a 392 SUPERFAMILY SSF54060 256 353 8.24E-18 T 12-10-2018 YpsIP31758_0549 408088b4d0b49ce7bb54b5f954d4888a 392 Pfam PF12639 DNase/tRNase domain of colicin-like bacteriocin 289 346 2.3E-7 T 12-10-2018 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 249 1.5E-90 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 SUPERFAMILY SSF55920 6 258 1.13E-87 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 Pfam PF00557 Metallopeptidase family M24 14 242 8.5E-51 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 39.562 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 Gene3D G3DSA:3.90.230.10 2 254 8.9E-105 T 12-10-2018 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3273 59f94d016a129d10c640a1c5a064980e 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 SUPERFAMILY SSF56655 2 242 4.06E-73 T 12-10-2018 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 246 40.924 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 1.2E-102 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 Gene3D G3DSA:3.30.540.10 1 146 2.8E-44 T 12-10-2018 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 Gene3D G3DSA:3.40.190.80 147 245 5.9E-33 T 12-10-2018 YpsIP31758_3630 1b8c9bfe3eaba25e7eae05a4b86a9da3 246 Pfam PF00459 Inositol monophosphatase family 7 231 5.1E-48 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YpsIP31758_1771 cdca1b1832d851ab7a75ab6d50373032 105 SUPERFAMILY SSF141488 30 102 1.14E-22 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily YpsIP31758_1771 cdca1b1832d851ab7a75ab6d50373032 105 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 95 5.6E-17 T 12-10-2018 IPR018660 C-type lysozyme inhibitor YpsIP31758_1771 cdca1b1832d851ab7a75ab6d50373032 105 Gene3D G3DSA:2.40.128.200 28 104 1.2E-26 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 PIRSF PIRSF002808 6 443 2.8E-143 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 SUPERFAMILY SSF103473 17 434 3.79E-82 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 Gene3D G3DSA:1.20.1250.20 19 223 1.1E-51 T 12-10-2018 YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 Pfam PF07690 Major Facilitator Superfamily 36 396 2.5E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 Gene3D G3DSA:1.20.1250.20 237 440 8.2E-47 T 12-10-2018 YpsIP31758_4078 a921be9d461d140efcebe93d819e417a 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.3E-143 T 12-10-2018 YpsIP31758_2576 f985fc74f2c0c6cea852a04715774e7e 328 SUPERFAMILY SSF52540 46 177 3.04E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2576 f985fc74f2c0c6cea852a04715774e7e 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 317 1.2E-114 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YpsIP31758_2576 f985fc74f2c0c6cea852a04715774e7e 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 321 40.666 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YpsIP31758_2576 f985fc74f2c0c6cea852a04715774e7e 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 3.8E-106 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YpsIP31758_2056 e1577a1041a5b7004dd91b7b7b8b2b82 355 SUPERFAMILY SSF52540 4 240 1.36E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2056 e1577a1041a5b7004dd91b7b7b8b2b82 355 SMART SM00382 28 211 4.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2056 e1577a1041a5b7004dd91b7b7b8b2b82 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2056 e1577a1041a5b7004dd91b7b7b8b2b82 355 Gene3D G3DSA:3.40.50.300 1 238 4.1E-72 T 12-10-2018 YpsIP31758_2056 e1577a1041a5b7004dd91b7b7b8b2b82 355 Pfam PF00005 ABC transporter 21 161 3.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 SUPERFAMILY SSF49265 218 399 1.75E-21 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 SMART SM00060 312 388 1.6E-5 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 SMART SM00060 220 291 2.9E-7 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 SUPERFAMILY SSF51055 416 462 2.98E-8 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 SUPERFAMILY SSF81296 21 212 1.11E-39 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 Gene3D G3DSA:2.10.10.20 416 462 1.8E-7 T 12-10-2018 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 Gene3D G3DSA:2.70.50.50 24 212 3.7E-65 T 12-10-2018 YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 Gene3D G3DSA:2.60.40.10 218 302 2.7E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 Gene3D G3DSA:2.60.40.10 309 398 1.8E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0610 534f6ba1fee91385109c42fad2cbefe3 464 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 21 209 1.1E-28 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Gene3D G3DSA:2.60.40.3110 246 335 2.8E-32 T 12-10-2018 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 SUPERFAMILY SSF141729 12 136 4.45E-28 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF13954 PapC N-terminal domain 13 159 3.5E-38 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Gene3D G3DSA:2.60.40.2610 647 737 4.1E-24 T 12-10-2018 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 288 298 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Gene3D G3DSA:3.10.20.410 27 148 1.1E-38 T 12-10-2018 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Gene3D G3DSA:2.60.40.2070 738 823 1.6E-27 T 12-10-2018 YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF13953 PapC C-terminal domain 741 806 1.7E-24 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_2676 63ba9cfd49c6b68c5a81038c63b54184 823 Pfam PF00577 Outer membrane usher protein 176 732 1.3E-193 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_0202 d89adfb2028348576ef14a50f5dedb5b 502 SUPERFAMILY SSF141571 70 134 2.62E-12 T 12-10-2018 YpsIP31758_0202 d89adfb2028348576ef14a50f5dedb5b 502 Pfam PF00805 Pentapeptide repeats (8 copies) 82 120 2.2E-5 T 12-10-2018 IPR001646 Pentapeptide repeat YpsIP31758_0202 d89adfb2028348576ef14a50f5dedb5b 502 Gene3D G3DSA:2.160.20.100 39 155 7.3E-12 T 12-10-2018 YpsIP31758_3451 ee5c15f17c56c0a9e604d113bfc7566b 266 Pfam PF06738 Putative threonine/serine exporter 21 260 2.7E-67 T 12-10-2018 IPR010619 Putative threonine/serine exporter YpsIP31758_0577 0644eae135a740e8727e8097b6310b8e 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 2.8E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YpsIP31758_0577 0644eae135a740e8727e8097b6310b8e 193 SUPERFAMILY SSF53474 3 188 2.73E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0577 0644eae135a740e8727e8097b6310b8e 193 Gene3D G3DSA:3.40.50.1820 1 193 3.5E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0487 f2d4e963a1247a4369516008bab923fd 232 Pfam PF09335 SNARE associated Golgi protein 48 172 6.9E-20 T 12-10-2018 IPR032816 SNARE associated Golgi protein YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 Gene3D G3DSA:3.90.180.10 11 321 3.7E-119 T 12-10-2018 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 1.4E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 Gene3D G3DSA:3.40.50.720 124 269 3.7E-119 T 12-10-2018 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 2.5E-10 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 SUPERFAMILY SSF50129 2 145 7.55E-36 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 SMART SM00829 11 325 3.9E-29 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_3766 e022801b3a47b1383818a196e05b8415 327 SUPERFAMILY SSF51735 113 275 1.22E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 SUPERFAMILY SSF50891 1 162 2.48E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 8.2E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.1E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.1E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.1E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 Gene3D G3DSA:2.40.100.10 1 164 8.0E-72 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_3015 a48298f45699905d85ede1289c3be480 164 PIRSF PIRSF001467 1 164 3.4E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF54719 95 206 3.93E-45 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 Gene3D G3DSA:1.10.287.990 20 90 1.9E-31 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-31 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PIRSF PIRSF000349 1 207 7.8E-80 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF46609 1 90 3.27E-36 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 Gene3D G3DSA:2.40.500.20 95 207 4.7E-50 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 202 2.3E-41 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.8E-27 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.8E-27 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.8E-27 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.8E-27 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_4121 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.8E-27 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 Pfam PF00871 Acetokinase family 6 393 2.2E-175 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PIRSF PIRSF000722 2 400 1.8E-144 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 Gene3D G3DSA:3.30.420.40 3 198 1.7E-77 T 12-10-2018 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 Gene3D G3DSA:3.30.420.40 199 400 7.1E-87 T 12-10-2018 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.6E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 9.6E-184 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 SUPERFAMILY SSF53067 4 199 2.4E-63 T 12-10-2018 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 188.923 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YpsIP31758_1443 9ecb48b6d7a0f083c3a7e444479721bc 400 SUPERFAMILY SSF53067 160 398 7.4E-85 T 12-10-2018 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 8.1E-92 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 60.09 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 Gene3D G3DSA:3.30.420.40 7 259 3.7E-116 T 12-10-2018 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 SUPERFAMILY SSF53067 10 261 3.89E-96 T 12-10-2018 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 Gene3D G3DSA:3.30.420.40 260 506 1.3E-95 T 12-10-2018 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 SUPERFAMILY SSF53067 261 503 2.96E-86 T 12-10-2018 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 8.3E-63 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 PIRSF PIRSF000538 9 507 3.5E-180 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_0101 12ab2473351bd8b2730eb7165c727c5e 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 7.9E-230 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 Pfam PF00072 Response regulator receiver domain 7 118 4.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 SMART SM00448 5 118 1.6E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 SUPERFAMILY SSF52172 4 136 4.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.0E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 SUPERFAMILY SSF46894 129 207 4.08E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 SMART SM00421 146 203 1.3E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1270 0550be3d83ac0b5313854c283909e3c4 209 Gene3D G3DSA:3.40.50.12740 6 207 6.3E-68 T 12-10-2018 YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 SUPERFAMILY SSF56349 97 386 4.12E-47 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 Gene3D G3DSA:1.10.150.130 89 203 7.3E-26 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 Gene3D G3DSA:1.10.443.10 205 394 1.5E-14 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 Pfam PF13356 Arm DNA-binding domain 3 87 5.1E-20 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 Gene3D G3DSA:3.30.160.390 1 88 1.5E-36 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_3540 e4ab8648d070f7ae27827947db54fbff 411 Pfam PF00589 Phage integrase family 205 383 3.9E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 SMART SM00382 32 235 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 Gene3D G3DSA:3.40.50.300 2 329 6.3E-75 T 12-10-2018 YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 SUPERFAMILY SSF52540 3 266 1.96E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.6E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_1781 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF00005 ABC transporter 24 187 1.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1831 d25d4a46bcfc594342ba9ec62b796d90 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.4E-203 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 YpsIP31758_1831 d25d4a46bcfc594342ba9ec62b796d90 464 SUPERFAMILY SSF52467 289 463 5.61E-77 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_1831 d25d4a46bcfc594342ba9ec62b796d90 464 Gene3D G3DSA:3.40.50.1220 286 464 2.0E-86 T 12-10-2018 YpsIP31758_1831 d25d4a46bcfc594342ba9ec62b796d90 464 PIRSF PIRSF000204 1 464 1.9E-238 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YpsIP31758_1065 af45e980ff3a1632573fc7a9fed53953 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 6.4E-35 T 12-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 YpsIP31758_1065 af45e980ff3a1632573fc7a9fed53953 78 Gene3D G3DSA:3.40.30.10 1 77 1.0E-27 T 12-10-2018 YpsIP31758_1065 af45e980ff3a1632573fc7a9fed53953 78 Pfam PF00462 Glutaredoxin 3 61 7.3E-15 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YpsIP31758_1065 af45e980ff3a1632573fc7a9fed53953 78 SUPERFAMILY SSF52833 1 72 3.43E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3732 4a82dfabaaa60b150353e3178fbcdd66 164 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 37 157 1.4E-36 T 12-10-2018 IPR022753 Type IV pilus biogenesis PilP YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 9.5E-24 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 6.5E-105 T 12-10-2018 YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.9E-89 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 SUPERFAMILY SSF56219 1 268 1.83E-88 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 Gene3D G3DSA:3.60.10.10 1 267 1.2E-82 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YpsIP31758_1976 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 1.3E-148 T 12-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.80 308 672 4.0E-146 T 12-10-2018 YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 9.0E-278 T 12-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF01522 Polysaccharide deacetylase 103 270 6.4E-31 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 SUPERFAMILY SSF88713 66 290 2.25E-36 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_2130 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.370 42 307 5.1E-77 T 12-10-2018 YpsIP31758_1675 25577b859e0d301ee151381f1edde0fc 180 Pfam PF16970 Type-1 fimbrial protein, A 55 180 2.7E-16 T 12-10-2018 IPR039458 Type-1 fimbrial protein, A YpsIP31758_1675 25577b859e0d301ee151381f1edde0fc 180 SUPERFAMILY SSF49401 28 180 6.46E-26 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1675 25577b859e0d301ee151381f1edde0fc 180 Gene3D G3DSA:2.60.40.1090 28 179 1.7E-32 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_3153 acc40e1a6bccb295fde929e959827058 152 SUPERFAMILY SSF53271 4 144 2.1E-31 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_3153 acc40e1a6bccb295fde929e959827058 152 Gene3D G3DSA:3.40.50.2020 1 152 4.2E-43 T 12-10-2018 YpsIP31758_3153 acc40e1a6bccb295fde929e959827058 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.845 T 12-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 YpsIP31758_3153 acc40e1a6bccb295fde929e959827058 152 Pfam PF00156 Phosphoribosyl transferase domain 11 145 1.6E-17 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_A0031 ac6bf683c6ccc088da5a4d16afbfb791 146 Pfam PF11657 Transcriptional activator TraM 2 140 1.7E-44 T 12-10-2018 IPR028140 Protein TraM GO:0009372 YpsIP31758_A0031 ac6bf683c6ccc088da5a4d16afbfb791 146 ProDom PD033334 TRAM PLASMID TRANSFER CONJUGATION ESSENTIAL SYSTEM SEQUENCING DIRECT DNA CONJUGAL 3 127 7.0E-28 T 12-10-2018 YpsIP31758_0795 4e26751f04db5905283638559a4b5bbf 1140 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 735 3.2E-73 T 12-10-2018 IPR009612 ImcF-related YpsIP31758_0795 4e26751f04db5905283638559a4b5bbf 1140 Pfam PF06744 Type VI secretion protein IcmF C-terminal 868 1066 3.5E-55 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 SMART SM00732 4 104 5.6E-43 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 Gene3D G3DSA:3.30.420.140 2 139 4.8E-47 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 SUPERFAMILY SSF53098 4 137 2.58E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 3.0E-59 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 Pfam PF03652 Holliday junction resolvase 5 137 3.5E-43 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YpsIP31758_0834 655dcbcc50e88327b28b430fee53516a 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.091 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YpsIP31758_3502 b2f139ff42ac7c93a95b24d039cba613 53 PIRSF PIRSF036466 1 53 3.1E-19 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 YpsIP31758_3502 b2f139ff42ac7c93a95b24d039cba613 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.845 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 YpsIP31758_3502 b2f139ff42ac7c93a95b24d039cba613 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.3E-13 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0555 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_1123 9f3601b339d0bb46dfd08bd2e89395d1 320 Gene3D G3DSA:3.40.50.1820 104 241 6.1E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1123 9f3601b339d0bb46dfd08bd2e89395d1 320 SUPERFAMILY SSF53474 87 229 1.42E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1123 9f3601b339d0bb46dfd08bd2e89395d1 320 Pfam PF11187 Protein of unknown function (DUF2974) 140 208 1.2E-4 T 12-10-2018 IPR024499 Protein of unknown function DUF2974 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 SUPERFAMILY SSF53448 17 391 3.83E-77 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 Gene3D G3DSA:3.90.550.10 1 300 9.7E-94 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 Pfam PF00483 Nucleotidyl transferase 22 291 1.0E-65 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 Gene3D G3DSA:2.160.10.10 301 428 3.0E-41 T 12-10-2018 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.1E-154 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.923 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 YpsIP31758_4004 700b818eee164719d38003302ec73eeb 428 SUPERFAMILY SSF51161 313 413 9.15E-20 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_2790 b4f2106264b16a0d815fdf170d09da2f 232 Pfam PF00005 ABC transporter 17 161 3.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2790 b4f2106264b16a0d815fdf170d09da2f 232 SUPERFAMILY SSF52540 2 216 4.42E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2790 b4f2106264b16a0d815fdf170d09da2f 232 SMART SM00382 26 211 9.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2790 b4f2106264b16a0d815fdf170d09da2f 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.1E-106 T 12-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YpsIP31758_2790 b4f2106264b16a0d815fdf170d09da2f 232 Gene3D G3DSA:3.40.50.300 1 225 2.2E-58 T 12-10-2018 YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF81296 38 244 4.76E-39 T 12-10-2018 IPR014756 Immunoglobulin E-set YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 38 241 1.3E-32 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.60.40.10 359 448 1.1E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF49299 364 450 1.96E-8 T 12-10-2018 IPR035986 PKD domain superfamily YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.70.50.50 38 246 9.7E-56 T 12-10-2018 YpsIP31758_3154 6c78c3397caa833d0385c56c34e23f75 534 SMART SM00089 367 451 2.8E-4 T 12-10-2018 IPR022409 PKD/Chitinase domain YpsIP31758_3160 95172fc4d37d3a8ab2bc3fc471967fc1 345 Pfam PF02424 ApbE family 38 314 4.5E-85 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 YpsIP31758_3160 95172fc4d37d3a8ab2bc3fc471967fc1 345 SUPERFAMILY SSF143631 30 341 1.94E-103 T 12-10-2018 IPR003374 ApbE-like superfamily YpsIP31758_3160 95172fc4d37d3a8ab2bc3fc471967fc1 345 Gene3D G3DSA:3.10.520.20 26 345 2.9E-115 T 12-10-2018 YpsIP31758_3160 95172fc4d37d3a8ab2bc3fc471967fc1 345 PIRSF PIRSF006268 9 342 2.3E-92 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 YpsIP31758_0641 ff62bc4bf415c1f0e47362de00f72838 218 Gene3D G3DSA:2.30.30.910 91 213 1.2E-19 T 12-10-2018 YpsIP31758_0641 ff62bc4bf415c1f0e47362de00f72838 218 Pfam PF13860 FlgD Ig-like domain 103 172 2.0E-9 T 12-10-2018 IPR025965 FlgD Ig-like domain YpsIP31758_0641 ff62bc4bf415c1f0e47362de00f72838 218 Pfam PF13861 FlgD Tudor-like domain 85 214 3.3E-12 T 12-10-2018 IPR025963 FlgD Tudor-like domain YpsIP31758_0641 ff62bc4bf415c1f0e47362de00f72838 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 25 76 4.9E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein YpsIP31758_0641 ff62bc4bf415c1f0e47362de00f72838 218 Gene3D G3DSA:2.60.40.4070 102 181 1.2E-19 T 12-10-2018 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 PIRSF PIRSF000076 1 550 3.7E-241 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:1.20.1270.20 149 232 3.5E-28 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.5E-250 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:3.40.50.2030 380 548 5.7E-59 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:1.20.1270.20 1 139 2.1E-35 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 SUPERFAMILY SSF56821 1 549 1.68E-188 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.697 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 1.8E-159 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_2617 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:3.40.50.2030 234 379 8.5E-60 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF46689 236 286 1.57E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 Gene3D G3DSA:2.60.120.280 12 174 2.7E-58 T 12-10-2018 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF46689 182 232 5.55E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 Gene3D G3DSA:1.10.10.60 178 288 3.5E-27 T 12-10-2018 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 SUPERFAMILY SSF51215 12 171 1.83E-29 T 12-10-2018 IPR037923 Transcription regulator HTH-like YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 SMART SM00342 199 282 5.0E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_1882 67ad2824f02580eab3c9f8300cf5488b 310 Pfam PF02311 AraC-like ligand binding domain 27 162 8.7E-23 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YpsIP31758_0508 f05ba7272383d64dfb357d51ad22c193 212 Gene3D G3DSA:3.40.50.410 6 177 4.3E-21 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0508 f05ba7272383d64dfb357d51ad22c193 212 SUPERFAMILY SSF53300 5 159 4.87E-23 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0508 f05ba7272383d64dfb357d51ad22c193 212 SMART SM00327 3 178 4.3E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0508 f05ba7272383d64dfb357d51ad22c193 212 PIRSF PIRSF020634 1 211 9.8E-80 T 12-10-2018 IPR011392 Tellurite resistance, TerY YpsIP31758_0508 f05ba7272383d64dfb357d51ad22c193 212 Pfam PF00092 von Willebrand factor type A domain 6 156 1.9E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 Pfam PF13500 AAA domain 4 205 3.0E-29 T 12-10-2018 YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 Gene3D G3DSA:3.40.50.300 3 220 7.1E-53 T 12-10-2018 YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.798 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 9.3E-44 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 PIRSF PIRSF006755 1 221 1.7E-68 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YpsIP31758_1868 80ddf7259c2e25ef7940f62dca48eb2a 222 SUPERFAMILY SSF52540 1 207 2.03E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0714 64a3b175d16b9c1e364409c9d019641d 590 Pfam PF06276 Ferric iron reductase FhuF-like transporter 410 565 2.2E-26 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain YpsIP31758_0714 64a3b175d16b9c1e364409c9d019641d 590 Pfam PF04183 IucA / IucC family 147 375 1.7E-54 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 YpsIP31758_0714 64a3b175d16b9c1e364409c9d019641d 590 Gene3D G3DSA:1.10.510.40 371 534 2.6E-9 T 12-10-2018 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 8.2E-39 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 SUPERFAMILY SSF52540 1 340 1.52E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 Gene3D G3DSA:1.20.1050.90 120 297 1.2E-79 T 12-10-2018 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 Gene3D G3DSA:3.40.50.300 8 331 1.2E-79 T 12-10-2018 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.4E-132 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YpsIP31758_4151 dc9b0fd07f79819cd1665a166a6807de 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.168 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 Gene3D G3DSA:1.10.3810.10 46 243 3.0E-46 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF00912 Transglycosylase 63 213 2.3E-44 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 Gene3D G3DSA:3.40.710.10 253 622 2.8E-73 T 12-10-2018 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF00905 Penicillin binding protein transpeptidase domain 316 530 2.4E-17 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 36 784 5.3E-297 T 12-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 SUPERFAMILY SSF53955 42 262 7.59E-53 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 697 781 3.5E-14 T 12-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2980 6b6e9092b007ea7e8094a39fb1685c16 787 SUPERFAMILY SSF56601 264 648 9.05E-93 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 SUPERFAMILY SSF161098 272 514 7.06E-58 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:1.20.58.370 9 103 2.6E-38 T 12-10-2018 IPR035277 MalF, N-terminal YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 308 512 3.8E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 SUPERFAMILY SSF160964 23 271 1.44E-82 T 12-10-2018 YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:1.10.3720.10 281 525 1.7E-70 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:3.10.650.10 106 279 1.7E-54 T 12-10-2018 YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Gene3D G3DSA:2.40.430.10 126 215 1.7E-54 T 12-10-2018 YpsIP31758_0305 4e29038faee76da4e307aa864e6ebc41 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 6.7E-62 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 PIRSF PIRSF005457 1 251 6.3E-89 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 6.1E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 SUPERFAMILY SSF56281 1 251 2.1E-67 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 2.6E-23 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 SMART SM00849 11 165 7.6E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 Gene3D G3DSA:3.60.15.10 1 251 5.2E-94 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.377 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 YpsIP31758_1052 ddf62b6761ee2c9bd87e11f518735645 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 9.3E-104 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 SUPERFAMILY SSF54862 1 199 1.15E-62 T 12-10-2018 YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 1.4E-77 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 1 199 1.0E-50 T 12-10-2018 YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.057 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 Pfam PF13247 4Fe-4S dicluster domain 58 153 2.1E-27 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YpsIP31758_1343 f6a178f48df086282e5dc9a49afe19ee 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 SUPERFAMILY SSF53067 262 512 3.06E-48 T 12-10-2018 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 467 9.1E-20 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 Gene3D G3DSA:3.30.420.40 253 517 1.6E-51 T 12-10-2018 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 Gene3D G3DSA:3.30.420.40 7 251 9.3E-61 T 12-10-2018 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 PIRSF PIRSF000538 11 518 1.4E-113 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 7.1E-47 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 SUPERFAMILY SSF53067 13 263 1.35E-57 T 12-10-2018 YpsIP31758_3518 9f18d59482e151a3e6a47f666be96a24 530 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 15 530 91.316 T 12-10-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.4E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.3E-33 T 12-10-2018 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF47413 1 59 3.38E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SMART SM00354 1 71 6.2E-36 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 61 305 4.1E-70 T 12-10-2018 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 160 289 4.1E-70 T 12-10-2018 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:1.10.260.40 3 59 3.1E-22 T 12-10-2018 YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF53822 60 333 3.34E-85 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0972 3b51a70ef6ef9876b1f8ee21f8837ee4 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 Gene3D G3DSA:3.40.640.10 121 485 3.5E-116 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 Pfam PF00155 Aminotransferase class I and II 149 460 1.7E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 4.2E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 SUPERFAMILY SSF53383 135 493 4.4E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 SUPERFAMILY SSF46785 26 90 5.07E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 3.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 3.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 SMART SM00345 29 88 1.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1217 b9f94306d2b36dc42d6698b7c98bd66e 501 Gene3D G3DSA:1.10.10.10 23 107 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 Pfam PF03466 LysR substrate binding domain 91 292 5.5E-36 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 SUPERFAMILY SSF46785 3 112 1.86E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 Gene3D G3DSA:1.10.10.10 3 88 5.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 Gene3D G3DSA:3.40.190.10 93 290 8.2E-60 T 12-10-2018 YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 Gene3D G3DSA:3.40.190.10 164 264 8.2E-60 T 12-10-2018 YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0579 9bd124099a0424c8dcb4296cd9daa70c 303 SUPERFAMILY SSF53850 91 294 2.17E-37 T 12-10-2018 YpsIP31758_0580 02071d5f77d07bd6609a4cccf10e0e1c 194 SUPERFAMILY SSF52218 1 191 1.06E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0580 02071d5f77d07bd6609a4cccf10e0e1c 194 Gene3D G3DSA:3.40.50.360 1 194 2.6E-65 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0580 02071d5f77d07bd6609a4cccf10e0e1c 194 Pfam PF02525 Flavodoxin-like fold 3 188 3.4E-36 T 12-10-2018 IPR003680 Flavodoxin-like fold YpsIP31758_3940 9140e549e62624487f2355e5307ffc62 326 PIRSF PIRSF005211 1 326 3.4E-104 T 12-10-2018 IPR012020 AB hydrolase 4 family YpsIP31758_3940 9140e549e62624487f2355e5307ffc62 326 SUPERFAMILY SSF53474 28 302 1.88E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3940 9140e549e62624487f2355e5307ffc62 326 Pfam PF00561 alpha/beta hydrolase fold 60 298 1.5E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_3940 9140e549e62624487f2355e5307ffc62 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 PIRSF PIRSF001553 1 290 4.7E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF52210 123 287 4.97E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.261 124 289 6.3E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF51735 1 122 3.38E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 12-10-2018 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 12-10-2018 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 12-10-2018 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 12-10-2018 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.720 2 123 8.2E-52 T 12-10-2018 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 SMART SM00881 4 100 6.1E-39 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.163 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.4E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF00549 CoA-ligase 151 271 9.4E-21 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YpsIP31758_2878 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF02629 CoA binding domain 6 99 1.0E-32 T 12-10-2018 IPR003781 CoA-binding GO:0048037 YpsIP31758_1498 c9e5d59d522d548202fc0ba3a11fb60d 258 Gene3D G3DSA:1.10.150.290 132 237 3.1E-86 T 12-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 YpsIP31758_1498 c9e5d59d522d548202fc0ba3a11fb60d 258 SUPERFAMILY SSF53335 6 210 9.91E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1498 c9e5d59d522d548202fc0ba3a11fb60d 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.232 T 12-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 YpsIP31758_1498 c9e5d59d522d548202fc0ba3a11fb60d 258 Gene3D G3DSA:3.40.50.150 9 254 3.1E-86 T 12-10-2018 YpsIP31758_1498 c9e5d59d522d548202fc0ba3a11fb60d 258 Pfam PF13649 Methyltransferase domain 36 124 7.0E-14 T 12-10-2018 YpsIP31758_3262 72fdfbf990e399e08e17887d40b0df9f 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.7E-127 T 12-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YpsIP31758_3262 72fdfbf990e399e08e17887d40b0df9f 231 Gene3D G3DSA:3.40.225.10 1 231 2.9E-61 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3262 72fdfbf990e399e08e17887d40b0df9f 231 SUPERFAMILY SSF53639 1 223 1.94E-68 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YpsIP31758_3262 72fdfbf990e399e08e17887d40b0df9f 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 5.5E-45 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_3262 72fdfbf990e399e08e17887d40b0df9f 231 SMART SM01007 7 198 4.7E-65 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal YpsIP31758_1622 46fe5184fed7d11e5a9edd4a5aba22e9 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 12-10-2018 IPR033379 Histidine acid phosphatase active site YpsIP31758_1622 46fe5184fed7d11e5a9edd4a5aba22e9 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 381 9.2E-20 T 12-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 YpsIP31758_1622 46fe5184fed7d11e5a9edd4a5aba22e9 441 SUPERFAMILY SSF53254 31 438 2.35E-68 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_1622 46fe5184fed7d11e5a9edd4a5aba22e9 441 Gene3D G3DSA:3.40.50.1240 35 428 2.7E-166 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_1622 46fe5184fed7d11e5a9edd4a5aba22e9 441 Gene3D G3DSA:3.40.50.1240 162 287 2.7E-166 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 12-10-2018 YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3070 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2118 2ce884df42bf5364476c05111c79a61a 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 4.6E-216 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 YpsIP31758_2118 2ce884df42bf5364476c05111c79a61a 447 Gene3D G3DSA:3.75.10.20 1 447 1.4E-206 T 12-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 YpsIP31758_2118 2ce884df42bf5364476c05111c79a61a 447 SUPERFAMILY SSF55909 4 446 7.06E-201 T 12-10-2018 YpsIP31758_2118 2ce884df42bf5364476c05111c79a61a 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 5.9E-252 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 YpsIP31758_2118 2ce884df42bf5364476c05111c79a61a 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.583 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:3.40.50.1000 7 185 2.2E-46 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.2E-30 T 12-10-2018 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 9.3E-59 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 SUPERFAMILY SSF56784 5 185 3.2E-44 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 7.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 5.8E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_3236 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:1.10.150.240 18 89 2.2E-46 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 Pfam PF00005 ABC transporter 18 165 8.0E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.0E-94 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 SMART SM00382 27 214 2.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 SUPERFAMILY SSF52540 1 216 2.18E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0240 5fa2954969d3fc66102013b5e1c896fc 222 Gene3D G3DSA:3.40.50.300 1 221 4.2E-62 T 12-10-2018 YpsIP31758_1664 10444424fd0f3a28ef76e7467f2f3336 250 SUPERFAMILY SSF49354 23 152 1.23E-26 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_1664 10444424fd0f3a28ef76e7467f2f3336 250 Gene3D G3DSA:2.60.40.10 35 151 1.8E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_1664 10444424fd0f3a28ef76e7467f2f3336 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 150 5.2E-19 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_0029 ee8e99150aa705c9a61a3010f06765df 196 Gene3D G3DSA:1.10.150.240 16 81 1.0E-61 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_0029 ee8e99150aa705c9a61a3010f06765df 196 SUPERFAMILY SSF56784 3 188 3.28E-41 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_0029 ee8e99150aa705c9a61a3010f06765df 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 60 184 1.1E-8 T 12-10-2018 YpsIP31758_0029 ee8e99150aa705c9a61a3010f06765df 196 Gene3D G3DSA:3.40.50.1000 4 182 1.0E-61 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_0029 ee8e99150aa705c9a61a3010f06765df 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 184 1.0E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:2.120.10.30 165 430 1.3E-115 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:3.40.50.10070 19 164 6.6E-54 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 2.9E-160 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF69304 155 428 9.15E-58 T 12-10-2018 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 377 398 0.018 T 12-10-2018 IPR011659 WD40-like Beta Propeller YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.9E-9 T 12-10-2018 IPR011659 WD40-like Beta Propeller YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 2.0E-5 T 12-10-2018 IPR011659 WD40-like Beta Propeller YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.3E-10 T 12-10-2018 IPR011659 WD40-like Beta Propeller YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 426 49.944 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.7E-32 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YpsIP31758_2868 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF52964 28 161 1.12E-40 T 12-10-2018 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 PIRSF PIRSF000847 1 180 1.2E-43 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.4E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 32.649 T 12-10-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.9E-60 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 Gene3D G3DSA:1.20.120.1760 4 176 1.1E-13 T 12-10-2018 YpsIP31758_2251 0ba10e4106836df4e96c866b4617c37b 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 SUPERFAMILY SSF55920 3 255 1.83E-90 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 Gene3D G3DSA:3.90.230.10 2 263 2.4E-117 T 12-10-2018 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.2E-108 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 Pfam PF00557 Metallopeptidase family M24 13 242 6.3E-52 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.288 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_1012 d16cf843f9371ee11d1bfb84055d56a0 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.704 T 12-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 SUPERFAMILY SSF118215 8 412 7.32E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.2E-53 T 12-10-2018 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 7.3E-117 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site YpsIP31758_3834 2b68742024df1f0fa19c1840a4129d76 438 Gene3D G3DSA:1.10.3860.10 1 427 1.3E-136 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_0066 313f5f33950eb94c233d28f942ee6ed8 260 SUPERFAMILY SSF53448 3 150 1.59E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0066 313f5f33950eb94c233d28f942ee6ed8 260 Gene3D G3DSA:3.90.550.10 2 200 2.5E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0066 313f5f33950eb94c233d28f942ee6ed8 260 Pfam PF00535 Glycosyl transferase family 2 8 132 5.6E-19 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_0194 aadf235f00fba0840bb38b0689cad2f1 463 Gene3D G3DSA:1.20.1740.10 11 461 2.5E-52 T 12-10-2018 YpsIP31758_0194 aadf235f00fba0840bb38b0689cad2f1 463 Pfam PF00324 Amino acid permease 18 430 5.7E-101 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_0194 aadf235f00fba0840bb38b0689cad2f1 463 PIRSF PIRSF006060 1 461 2.4E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0194 aadf235f00fba0840bb38b0689cad2f1 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_1787 ba832b7e4258813a7a771d75fb96373a 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.2E-35 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YpsIP31758_1787 ba832b7e4258813a7a771d75fb96373a 75 Pfam PF06667 Phage shock protein B 4 74 1.2E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YpsIP31758_1985 600ee7ff8004f50290f191e5727eb39b 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 83 1.0E-26 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 YpsIP31758_3326 7d4ac16be3304ee5faed5392ddd0723b 280 Gene3D G3DSA:3.40.50.1980 27 146 9.8E-38 T 12-10-2018 YpsIP31758_3326 7d4ac16be3304ee5faed5392ddd0723b 280 Gene3D G3DSA:3.40.50.1980 148 272 1.9E-31 T 12-10-2018 YpsIP31758_3326 7d4ac16be3304ee5faed5392ddd0723b 280 Pfam PF01497 Periplasmic binding protein 31 226 5.5E-27 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_3326 7d4ac16be3304ee5faed5392ddd0723b 280 SUPERFAMILY SSF53807 28 269 1.02E-55 T 12-10-2018 YpsIP31758_3326 7d4ac16be3304ee5faed5392ddd0723b 280 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 8 273 52.754 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.56 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.2E-102 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.6E-96 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 Gene3D G3DSA:3.20.20.70 1 268 4.5E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1937 fead03c591d46cc976d3edac84f6259f 268 SUPERFAMILY SSF51366 1 266 8.48E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_1912 202c4fc0f1517cfe529368cb70281105 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.2E-38 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YpsIP31758_1912 202c4fc0f1517cfe529368cb70281105 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.7E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 YpsIP31758_1912 202c4fc0f1517cfe529368cb70281105 108 PIRSF PIRSF037511 1 108 1.0E-35 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YpsIP31758_1912 202c4fc0f1517cfe529368cb70281105 108 SUPERFAMILY SSF55159 5 104 6.02E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 YpsIP31758_1912 202c4fc0f1517cfe529368cb70281105 108 Gene3D G3DSA:3.30.780.10 28 108 3.9E-33 T 12-10-2018 YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 SUPERFAMILY SSF161098 10 264 4.19E-45 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 Gene3D G3DSA:1.10.3720.10 291 534 2.8E-25 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 Gene3D G3DSA:1.10.3720.10 9 268 7.3E-44 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 261 6.8E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 371 525 7.0E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.0E-240 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 YpsIP31758_3415 b9667c6b5551c0b4c84d7493e3f83f17 535 SUPERFAMILY SSF161098 286 528 4.06E-30 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 Gene3D G3DSA:3.30.230.10 323 564 1.8E-96 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 Gene3D G3DSA:3.40.50.300 111 235 4.5E-12 T 12-10-2018 YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 460 479 9.5E-9 T 12-10-2018 YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 430 449 9.5E-9 T 12-10-2018 YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 490 508 9.5E-9 T 12-10-2018 YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 SUPERFAMILY SSF54211 347 538 3.72E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 433 534 3.8E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 YpsIP31758_2545 794048a438b64884df71657ae720eef2 583 Pfam PF13654 AAA domain 132 321 2.6E-20 T 12-10-2018 YpsIP31758_3300 1251447bf4ef911a32b51277abc58921 106 Gene3D G3DSA:1.20.5.400 21 63 2.3E-13 T 12-10-2018 YpsIP31758_3300 1251447bf4ef911a32b51277abc58921 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.701 T 12-10-2018 IPR023081 Cell division protein FtsB YpsIP31758_3300 1251447bf4ef911a32b51277abc58921 106 Pfam PF04977 Septum formation initiator 11 89 6.1E-30 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC YpsIP31758_1228 4892cc6f5d2d5c7f6c353aca1e106f4e 743 SUPERFAMILY SSF82171 187 404 3.3E-11 T 12-10-2018 YpsIP31758_1228 4892cc6f5d2d5c7f6c353aca1e106f4e 743 SUPERFAMILY SSF161098 433 510 9.68E-6 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1228 4892cc6f5d2d5c7f6c353aca1e106f4e 743 SUPERFAMILY SSF161098 521 726 6.93E-21 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1228 4892cc6f5d2d5c7f6c353aca1e106f4e 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 461 733 9.4E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1228 4892cc6f5d2d5c7f6c353aca1e106f4e 743 Gene3D G3DSA:1.10.3720.10 508 736 3.4E-21 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0449 d880a82fb032e010a0422f32487d98c3 260 Pfam PF02405 Permease MlaE 45 256 5.2E-76 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 YpsIP31758_0449 d880a82fb032e010a0422f32487d98c3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.2E-104 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.1E-28 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 Pfam PF00886 Ribosomal protein S16 8 68 4.2E-24 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.752 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 SUPERFAMILY SSF54565 1 76 1.96E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3228 dbd4d14c4f862596aa706247fcd02bea 82 Gene3D G3DSA:3.30.1320.10 1 81 1.7E-30 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_2451 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF05170 AsmA family 2 233 9.6E-22 T 12-10-2018 IPR007844 AsmA YpsIP31758_2451 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF13502 AsmA-like C-terminal region 359 549 7.3E-21 T 12-10-2018 IPR032712 AsmA-like, C-terminal YpsIP31758_2956 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 18.54 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YpsIP31758_2956 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 85 31.381 T 12-10-2018 IPR024905 Sec-independent protein translocase protein TatE YpsIP31758_2956 cbc4f6f64d86c39c8ec90cb00addf3da 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.1E-18 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YpsIP31758_2956 cbc4f6f64d86c39c8ec90cb00addf3da 85 Pfam PF02416 mttA/Hcf106 family 4 61 1.2E-12 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Pfam PF04851 Type III restriction enzyme, res subunit 263 456 3.1E-28 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Gene3D G3DSA:3.90.640.50 32 115 5.8E-46 T 12-10-2018 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 771 1057 7.0E-36 T 12-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Gene3D G3DSA:3.90.1570.50 5 254 5.8E-46 T 12-10-2018 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 SUPERFAMILY SSF52540 300 770 4.43E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 SUPERFAMILY SSF52540 210 458 7.38E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Gene3D G3DSA:3.40.50.300 531 775 3.5E-54 T 12-10-2018 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 206 1.3E-18 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 764 1.9E-99 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 SMART SM00487 260 481 2.8E-6 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_3538 05ac40b68aa1eb044e1f83c4fbb1c415 1082 Gene3D G3DSA:3.40.50.300 263 478 5.3E-58 T 12-10-2018 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 475 30.611 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.073 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 SUPERFAMILY SSF51366 26 274 2.24E-83 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 SUPERFAMILY SSF51366 280 473 4.08E-57 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 1.7E-95 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Gene3D G3DSA:3.20.20.70 31 278 7.8E-183 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 471 5.1E-57 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 YpsIP31758_1935 bdb2b561e295c57fc39137231bac21b9 475 Gene3D G3DSA:3.20.20.70 279 469 7.8E-183 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3704 d9344a304c9506e1a84b4d11e79f1b89 233 Pfam PF13676 TIR domain 103 196 8.9E-12 T 12-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YpsIP31758_3704 d9344a304c9506e1a84b4d11e79f1b89 233 SUPERFAMILY SSF52200 99 167 1.7E-14 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily YpsIP31758_3704 d9344a304c9506e1a84b4d11e79f1b89 233 Gene3D G3DSA:3.40.50.10140 64 231 5.1E-21 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily YpsIP31758_2950 b8f8bc5d465199749e9adf230fbdcdbc 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 29.23 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2950 b8f8bc5d465199749e9adf230fbdcdbc 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2950 b8f8bc5d465199749e9adf230fbdcdbc 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 4.9E-136 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_2950 b8f8bc5d465199749e9adf230fbdcdbc 370 Pfam PF01098 Cell cycle protein 21 364 7.0E-122 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 Gene3D G3DSA:3.40.50.300 6 196 5.6E-71 T 12-10-2018 YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.5E-58 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 PIRSF PIRSF015617 1 196 1.5E-67 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 4.3E-78 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 SUPERFAMILY SSF52540 7 196 2.66E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1927 0f85e307ff8050920902dae56d801a53 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.9E-6 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 YpsIP31758_3964 2f4c431c0fd8b236eaa85397bbabe1eb 329 Pfam PF05036 Sporulation related domain 245 318 3.0E-10 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 YpsIP31758_3964 2f4c431c0fd8b236eaa85397bbabe1eb 329 Gene3D G3DSA:3.30.70.1070 227 328 1.5E-33 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_3964 2f4c431c0fd8b236eaa85397bbabe1eb 329 SUPERFAMILY SSF110997 244 309 5.1E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_3964 2f4c431c0fd8b236eaa85397bbabe1eb 329 Hamap MF_02021 Cell division protein DamX [damX]. 1 329 25.583 T 12-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 Gene3D G3DSA:2.60.120.10 43 164 6.4E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 SMART SM00100 30 151 3.1E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 SUPERFAMILY SSF46785 165 245 3.79E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 2.4E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 SMART SM00419 187 235 1.7E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.0E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 Gene3D G3DSA:1.10.10.10 165 247 2.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 SUPERFAMILY SSF51206 23 162 4.06E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 8.8E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1833 0184f3eec9b3baa691301acbf81273e4 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 8.8E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 SMART SM00062 35 255 2.2E-41 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Gene3D G3DSA:3.40.190.10 27 245 8.5E-54 T 12-10-2018 YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 3.8E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 Gene3D G3DSA:3.40.190.10 122 213 8.5E-54 T 12-10-2018 YpsIP31758_3190 f46f10fc48ef1eb4e60f2036f6f4c23f 262 SUPERFAMILY SSF53850 5 254 1.38E-53 T 12-10-2018 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00382 159 361 6.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00760 370 439 6.1E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 12-10-2018 IPR024633 DnaA N-terminal domain YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.7E-99 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:3.40.50.300 113 291 1.7E-51 T 12-10-2018 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:3.30.300.180 2 108 5.6E-41 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.8.60 293 363 1.1E-23 T 12-10-2018 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.412 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.1750.10 369 462 7.2E-40 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 1.9E-186 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YpsIP31758_4153 f05b9d36a29d5b13df96e544916a916b 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 Gene3D G3DSA:2.40.230.10 33 292 3.9E-106 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 6.1E-84 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 SUPERFAMILY SSF56931 39 291 1.83E-94 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_0217 efacd3dde81d132b4963149daf0bc2ad 292 Pfam PF02253 Phospholipase A1 43 288 9.4E-99 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 YpsIP31758_3699 590f2afd0739beab79501ac471bbbec3 507 Pfam PF07916 TraG-like protein, N-terminal region 8 481 9.0E-80 T 12-10-2018 IPR012931 TraG-like, N-terminal YpsIP31758_1729 eac49ddf601f6bb057eef2148b2f5434 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.835 T 12-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 YpsIP31758_1729 eac49ddf601f6bb057eef2148b2f5434 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 3.9E-38 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.1E-42 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.9E-92 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 Gene3D G3DSA:3.30.572.10 1 264 1.1E-134 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 Pfam PF00303 Thymidylate synthase 2 264 3.8E-126 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.766 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 SUPERFAMILY SSF55831 1 264 6.67E-130 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.7E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.7E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.7E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.7E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_0984 b15a4ac589d76bf4f503db2a564bc391 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.7E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 YpsIP31758_1059 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 311 4.3E-53 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 YpsIP31758_1059 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Gene3D G3DSA:3.40.190.10 25 324 7.8E-140 T 12-10-2018 YpsIP31758_1059 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 SUPERFAMILY SSF53850 24 324 4.61E-94 T 12-10-2018 YpsIP31758_1059 d4ff4241a753e5a1eaa270f3e1e2c4dd 334 Gene3D G3DSA:3.40.190.100 113 252 7.8E-140 T 12-10-2018 YpsIP31758_1075 5995a3dc90617603d7a6d0f63cafbb6e 221 SUPERFAMILY SSF52540 2 194 6.09E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1075 5995a3dc90617603d7a6d0f63cafbb6e 221 Gene3D G3DSA:3.40.50.300 1 205 3.7E-40 T 12-10-2018 YpsIP31758_1075 5995a3dc90617603d7a6d0f63cafbb6e 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1075 5995a3dc90617603d7a6d0f63cafbb6e 221 Pfam PF00005 ABC transporter 19 150 3.4E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1075 5995a3dc90617603d7a6d0f63cafbb6e 221 SMART SM00382 26 199 1.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0600 4024ff1c27279b1cd4c7ae2abde9a14b 375 SUPERFAMILY SSF52540 144 330 1.38E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0600 4024ff1c27279b1cd4c7ae2abde9a14b 375 Gene3D G3DSA:3.40.50.300 145 353 4.4E-10 T 12-10-2018 YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Gene3D G3DSA:2.150.10.10 2479 2605 3.7E-6 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Gene3D G3DSA:2.150.10.10 2632 2763 3.9E-10 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Gene3D G3DSA:3.40.50.11050 734 947 1.7E-6 T 12-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Gene3D G3DSA:3.40.50.11050 1047 1273 4.1E-60 T 12-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 SUPERFAMILY SSF51120 2157 2569 1.9E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 SUPERFAMILY SSF69318 1784 2055 2.09E-17 T 12-10-2018 YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Gene3D G3DSA:2.150.10.10 2156 2365 5.8E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 SUPERFAMILY SSF51120 2633 2756 2.35E-8 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Pfam PF11713 Peptidase C80 family 1078 1254 4.4E-32 T 12-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YpsIP31758_0824 a75bed9690cd62420dd358e5ea6a7e50 3104 Pfam PF11713 Peptidase C80 family 766 918 2.4E-33 T 12-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YpsIP31758_0750 8ec94fc9bb696f770f043280c7c8ffc3 162 SUPERFAMILY SSF102712 88 126 4.05E-5 T 12-10-2018 YpsIP31758_0750 8ec94fc9bb696f770f043280c7c8ffc3 162 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 160 7.4E-43 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 YpsIP31758_0750 8ec94fc9bb696f770f043280c7c8ffc3 162 Gene3D G3DSA:3.40.140.10 37 160 1.2E-39 T 12-10-2018 YpsIP31758_0750 8ec94fc9bb696f770f043280c7c8ffc3 162 Pfam PF04002 RadC-like JAB domain 39 158 8.0E-42 T 12-10-2018 IPR025657 RadC-like JAB domain YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 Gene3D G3DSA:3.20.20.210 387 754 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 SUPERFAMILY SSF51726 394 756 8.76E-119 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 SUPERFAMILY SSF51726 5 392 1.16E-113 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 9.0E-160 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 PIRSF PIRSF000382 2 758 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.598 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 5.4E-127 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YpsIP31758_0264 757136d019d64ed3e40086e89fe968b8 758 Gene3D G3DSA:3.20.20.210 7 522 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 Gene3D G3DSA:2.160.20.20 1 440 8.4E-27 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 Pfam PF03212 Pertactin 311 424 3.3E-21 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 Gene3D G3DSA:2.40.128.130 449 759 6.4E-69 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 SMART SM00869 494 748 1.0E-43 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 327 759 1.2E-95 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 Pfam PF03797 Autotransporter beta-domain 497 738 5.3E-48 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 535 559 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 714 739 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 627 644 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 675 696 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 646 669 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 PRINTS PR01484 Pertactin virulence factor family signature 739 759 5.6E-12 T 12-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 SUPERFAMILY SSF103515 462 759 8.89E-50 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1288 a3b167480b587b8a856e50bdd66523a8 759 SUPERFAMILY SSF51126 56 445 1.16E-21 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0006 1bd527219bce0cef78a5f30016e5715b 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.945 T 12-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup YpsIP31758_0006 1bd527219bce0cef78a5f30016e5715b 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 549 5.5E-185 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YpsIP31758_0006 1bd527219bce0cef78a5f30016e5715b 622 Pfam PF02705 K+ potassium transporter 14 544 2.0E-210 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:3.40.190.10 93 293 4.2E-49 T 12-10-2018 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 SUPERFAMILY SSF46785 5 89 1.57E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:1.10.10.10 2 87 7.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.2E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:3.40.190.10 166 268 4.2E-49 T 12-10-2018 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 Pfam PF03466 LysR substrate binding domain 91 294 2.2E-37 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 SUPERFAMILY SSF53850 92 294 2.17E-39 T 12-10-2018 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3000 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Gene3D G3DSA:3.90.190.20 314 451 1.4E-29 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Pfam PF01225 Mur ligase family, catalytic domain 2 98 1.6E-18 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 SUPERFAMILY SSF53623 95 308 5.49E-48 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 6.9E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Gene3D G3DSA:3.40.50.720 1 90 5.3E-35 T 12-10-2018 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 SUPERFAMILY SSF53244 312 449 9.03E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 SUPERFAMILY SSF51984 1 90 3.79E-23 T 12-10-2018 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.781 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.3E-257 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Pfam PF08245 Mur ligase middle domain 108 291 4.0E-18 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_3620 fe6ed9afb84978ef8a3b65a8d64b42de 461 Gene3D G3DSA:3.40.1190.10 91 313 2.0E-50 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3408 b0aaaf6a628d9db22a76e7dd7d942fa8 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.959 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 YpsIP31758_3408 b0aaaf6a628d9db22a76e7dd7d942fa8 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.3E-97 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 YpsIP31758_3408 b0aaaf6a628d9db22a76e7dd7d942fa8 200 SUPERFAMILY SSF52016 3 197 3.53E-60 T 12-10-2018 YpsIP31758_3408 b0aaaf6a628d9db22a76e7dd7d942fa8 200 Pfam PF00694 Aconitase C-terminal domain 1 125 7.0E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 YpsIP31758_3408 b0aaaf6a628d9db22a76e7dd7d942fa8 200 Gene3D G3DSA:3.20.19.10 1 180 6.7E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.970 348 573 2.4E-73 T 12-10-2018 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 1.2E-32 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 4.0E-43 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.970 1 178 1.9E-61 T 12-10-2018 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.1220 179 333 7.8E-50 T 12-10-2018 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 3.9E-40 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52518 357 558 3.93E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52467 182 351 1.42E-45 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_2619 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52518 2 179 4.21E-45 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 Gene3D G3DSA:1.20.5.1030 66 123 4.9E-16 T 12-10-2018 IPR038379 SecE superfamily YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3866 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.204 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 TIGRFAM TIGR00077 lspA: signal peptidase II 3 162 4.7E-50 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 3.7E-37 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 2.1E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 2.1E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_3459 936a397744c1e2b21314a04309ce7b01 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 2.1E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 3.6E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 3.6E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 3.6E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 3.6E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 3.6E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 SUPERFAMILY SSF160544 248 352 5.62E-37 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 Gene3D G3DSA:3.40.1690.10 214 355 4.4E-54 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 344 2.0E-109 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_0623 64f25511d34e0205b7ad3688970f7a27 377 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 1.6E-107 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.10.10.10 1 79 6.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.3E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF07840 FadR C-terminal domain 72 234 3.4E-74 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF46785 11 87 2.65E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.20.120.530 80 239 1.9E-43 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 SMART SM00345 12 71 1.0E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 163.765 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF48008 79 230 3.01E-66 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_1999 2fb848b9bc1d3a681f33b86de2866633 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.5E-122 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YpsIP31758_B0073 a0397300862fcb2fa836b74521e8edf0 81 SUPERFAMILY SSF89447 5 74 4.01E-17 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily YpsIP31758_B0073 a0397300862fcb2fa836b74521e8edf0 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 3.3E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 YpsIP31758_B0073 a0397300862fcb2fa836b74521e8edf0 81 Gene3D G3DSA:2.10.260.10 1 80 5.5E-26 T 12-10-2018 YpsIP31758_B0073 a0397300862fcb2fa836b74521e8edf0 81 SMART SM00966 7 52 1.7E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 YpsIP31758_3949 9eb8417aa880ce5d7ebec7c4a86716ec 513 SUPERFAMILY SSF52540 10 377 2.86E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3949 9eb8417aa880ce5d7ebec7c4a86716ec 513 Gene3D G3DSA:3.40.50.300 6 149 3.7E-10 T 12-10-2018 YpsIP31758_3949 9eb8417aa880ce5d7ebec7c4a86716ec 513 Pfam PF05872 Bacterial protein of unknown function (DUF853) 16 513 2.3E-235 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal YpsIP31758_3949 9eb8417aa880ce5d7ebec7c4a86716ec 513 Gene3D G3DSA:3.40.50.300 203 383 1.9E-19 T 12-10-2018 YpsIP31758_2082 46c72300f1a4a85907916363c32ee99a 329 Gene3D G3DSA:1.10.10.800 166 255 2.8E-85 T 12-10-2018 YpsIP31758_2082 46c72300f1a4a85907916363c32ee99a 329 SUPERFAMILY SSF53474 25 319 2.48E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2082 46c72300f1a4a85907916363c32ee99a 329 Gene3D G3DSA:3.40.50.1820 36 311 2.8E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2082 46c72300f1a4a85907916363c32ee99a 329 Pfam PF01738 Dienelactone hydrolase family 42 157 1.5E-5 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 SUPERFAMILY SSF53137 15 129 4.58E-48 T 12-10-2018 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.8E-55 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PIRSF PIRSF002131 1 129 1.3E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.637 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3892 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Gene3D G3DSA:3.30.420.80 1 129 1.5E-58 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF14561 Tetratricopeptide repeat 200 289 3.6E-30 T 12-10-2018 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:3.40.30.10 3 111 3.8E-27 T 12-10-2018 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 SUPERFAMILY SSF48452 120 242 1.23E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 SUPERFAMILY SSF52833 4 113 5.69E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF14559 Tetratricopeptide repeat 124 195 3.2E-18 T 12-10-2018 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:1.25.40.10 202 289 6.2E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF00085 Thioredoxin 7 107 4.9E-18 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 YpsIP31758_3023 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:1.25.40.10 112 201 1.0E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1072 0b0580b829316dc37571b0f007f48a09 322 Gene3D G3DSA:1.10.3720.10 87 316 8.6E-17 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1072 0b0580b829316dc37571b0f007f48a09 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 317 2.4E-37 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1072 0b0580b829316dc37571b0f007f48a09 322 SUPERFAMILY SSF161098 92 302 9.35E-17 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0313 7ac72b11336ce431be1d8b2108e18c5f 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 160 1.1E-54 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0313 7ac72b11336ce431be1d8b2108e18c5f 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 2.2E-54 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0313 7ac72b11336ce431be1d8b2108e18c5f 165 PIRSF PIRSF028301 1 165 1.1E-60 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Gene3D G3DSA:3.30.870.10 303 483 5.6E-31 T 12-10-2018 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 SUPERFAMILY SSF56024 67 315 3.14E-48 T 12-10-2018 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Pfam PF13091 PLD-like domain 135 244 4.3E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Pfam PF13091 PLD-like domain 331 448 1.1E-23 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.669 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.7E-209 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 SMART SM00155 219 246 5.2E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 SMART SM00155 399 426 7.3E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 4.0E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 SUPERFAMILY SSF56024 273 473 9.64E-51 T 12-10-2018 YpsIP31758_1953 658f2636d618db8fec6587077c82c4be 486 Gene3D G3DSA:3.30.870.10 112 302 1.1E-32 T 12-10-2018 YpsIP31758_4143 916c25258aaaaf89ccfadd591a81b5e2 137 Gene3D G3DSA:2.60.40.790 33 137 2.1E-19 T 12-10-2018 IPR008978 HSP20-like chaperone YpsIP31758_4143 916c25258aaaaf89ccfadd591a81b5e2 137 SUPERFAMILY SSF49764 30 137 9.77E-20 T 12-10-2018 IPR008978 HSP20-like chaperone YpsIP31758_4143 916c25258aaaaf89ccfadd591a81b5e2 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 44.274 T 12-10-2018 IPR023728 Small heat shock protein IbpA YpsIP31758_4143 916c25258aaaaf89ccfadd591a81b5e2 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.6E-21 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 3.2E-32 T 12-10-2018 YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 SUPERFAMILY SSF51735 9 243 1.89E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2515 f4fa0ce171112a5905bcf0349d14f023 262 Gene3D G3DSA:3.40.50.720 1 250 8.7E-39 T 12-10-2018 YpsIP31758_3554 2f12514e60ce1e8ca2add5d877b4c481 292 Gene3D G3DSA:3.40.50.300 3 283 1.4E-66 T 12-10-2018 YpsIP31758_3554 2f12514e60ce1e8ca2add5d877b4c481 292 SMART SM00382 29 241 5.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3554 2f12514e60ce1e8ca2add5d877b4c481 292 SUPERFAMILY SSF52540 10 245 1.16E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3554 2f12514e60ce1e8ca2add5d877b4c481 292 Pfam PF00005 ABC transporter 22 191 3.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Gene3D G3DSA:2.60.40.2610 711 801 7.7E-30 T 12-10-2018 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Gene3D G3DSA:2.60.40.2070 803 883 5.5E-18 T 12-10-2018 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Gene3D G3DSA:2.60.40.3110 293 382 7.2E-34 T 12-10-2018 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Gene3D G3DSA:3.10.20.410 40 180 1.5E-22 T 12-10-2018 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Pfam PF13954 PapC N-terminal domain 42 203 1.2E-36 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Pfam PF00577 Outer membrane usher protein 222 796 1.6E-145 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 Pfam PF13953 PapC C-terminal domain 805 865 8.0E-18 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 SUPERFAMILY SSF141729 41 180 2.09E-24 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_0169 7bf374eacbd469e1b90d11b7f9e056b7 883 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 335 345 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site YpsIP31758_1130 3657c881c3d566865634af056ee069ac 218 SUPERFAMILY SSF89069 1 66 7.19E-20 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 YpsIP31758_1130 3657c881c3d566865634af056ee069ac 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 2.6E-22 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal YpsIP31758_1130 3657c881c3d566865634af056ee069ac 218 PIRSF PIRSF016938 1 206 2.8E-31 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 YpsIP31758_1130 3657c881c3d566865634af056ee069ac 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 1.1E-34 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YpsIP31758_1130 3657c881c3d566865634af056ee069ac 218 Gene3D G3DSA:1.10.10.880 1 66 4.1E-27 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 YpsIP31758_2464 f286c5b6dcd787918034bf58bae5c456 245 Pfam PF02698 DUF218 domain 48 170 1.1E-17 T 12-10-2018 IPR003848 Domain of unknown function DUF218 YpsIP31758_2464 f286c5b6dcd787918034bf58bae5c456 245 PIRSF PIRSF005011 1 245 6.8E-150 T 12-10-2018 IPR023604 Uncharacterised protein family SanA YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:3.40.190.10 163 262 1.2E-60 T 12-10-2018 YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:1.10.10.10 3 91 1.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 SUPERFAMILY SSF46785 5 107 4.24E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Pfam PF03466 LysR substrate binding domain 88 291 3.5E-40 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:3.40.190.10 92 289 1.2E-60 T 12-10-2018 YpsIP31758_0969 2f2cf99d5ccaaad756f56d2c01e76dd1 302 SUPERFAMILY SSF53850 89 295 4.71E-43 T 12-10-2018 YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 SUPERFAMILY SSF47616 72 202 4.46E-25 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 1.1E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 SUPERFAMILY SSF52833 1 83 3.77E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 194 1.7E-5 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 Gene3D G3DSA:1.20.1050.10 85 201 7.2E-41 T 12-10-2018 YpsIP31758_2665 ef8a3111e7f5fac1f5a27c69a492ed33 206 Gene3D G3DSA:3.40.30.10 1 83 9.7E-35 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Gene3D G3DSA:2.40.50.100 88 232 3.1E-69 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Gene3D G3DSA:2.40.30.170 82 304 3.1E-69 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Pfam PF13437 HlyD family secretion protein 200 305 1.2E-6 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Pfam PF13533 Biotin-lipoyl like 89 137 2.0E-16 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 SUPERFAMILY SSF111369 81 320 1.12E-56 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 415 54.981 T 12-10-2018 IPR022824 Multidrug resistance protein MdtA YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 396 2.6E-77 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Gene3D G3DSA:1.10.287.470 123 196 3.1E-69 T 12-10-2018 YpsIP31758_1215 90362c8942414602ac8e3391fa2fb4ac 444 Gene3D G3DSA:2.40.420.20 305 398 7.1E-21 T 12-10-2018 YpsIP31758_0318 33e9c4c6005fa496c28582e1e60684e6 438 SUPERFAMILY SSF49879 31 104 2.29E-5 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 YpsIP31758_0318 33e9c4c6005fa496c28582e1e60684e6 438 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 431 2.9E-112 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein YpsIP31758_3509 68b0004de38916d2758482689aa35a29 384 SMART SM00267 203 373 1.6E-50 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3509 68b0004de38916d2758482689aa35a29 384 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 373 6.0E-44 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3509 68b0004de38916d2758482689aa35a29 384 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 369 1.8E-45 T 12-10-2018 IPR000160 GGDEF domain YpsIP31758_3509 68b0004de38916d2758482689aa35a29 384 Gene3D G3DSA:3.30.70.270 200 375 5.6E-50 T 12-10-2018 YpsIP31758_3509 68b0004de38916d2758482689aa35a29 384 SUPERFAMILY SSF55073 219 374 8.63E-43 T 12-10-2018 IPR029787 Nucleotide cyclase YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.3E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 425 3.1E-156 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 Gene3D G3DSA:3.40.50.12240 25 443 6.6E-139 T 12-10-2018 YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 94 3.0E-4 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 SUPERFAMILY SSF52540 97 365 1.44E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3818 d1002a61fb666d64a814bee2d904f768 445 SMART SM00382 162 343 2.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3731 d220abed3894ffa24b4064266d9c6e0e 517 Gene3D G3DSA:3.40.50.300 200 498 2.0E-64 T 12-10-2018 YpsIP31758_3731 d220abed3894ffa24b4064266d9c6e0e 517 Gene3D G3DSA:3.30.450.90 60 195 8.3E-10 T 12-10-2018 YpsIP31758_3731 d220abed3894ffa24b4064266d9c6e0e 517 Pfam PF00437 Type II/IV secretion system protein 98 374 3.2E-41 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_3731 d220abed3894ffa24b4064266d9c6e0e 517 SUPERFAMILY SSF52540 73 498 1.0E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3180 1251de8564bec8b61f6bd2c9f5c5e51d 180 Pfam PF03079 ARD/ARD' family 5 165 1.9E-34 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 YpsIP31758_3180 1251de8564bec8b61f6bd2c9f5c5e51d 180 SUPERFAMILY SSF51182 4 178 4.16E-41 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_3180 1251de8564bec8b61f6bd2c9f5c5e51d 180 Gene3D G3DSA:2.60.120.10 2 157 9.0E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3180 1251de8564bec8b61f6bd2c9f5c5e51d 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.446 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 533 666 7.6E-41 T 12-10-2018 IPR020992 Tail specific protease, C-terminal YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 Gene3D G3DSA:2.30.42.10 245 337 4.2E-16 T 12-10-2018 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 SMART SM00245 325 530 3.0E-81 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 Gene3D G3DSA:3.90.226.10 338 544 1.6E-51 T 12-10-2018 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 Pfam PF03572 Peptidase family S41 355 528 5.6E-53 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 SMART SM00228 245 322 1.3E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 550 2.0E-126 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 SUPERFAMILY SSF52096 165 539 6.79E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 1.9E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_1672 3f964d522c2482dd3f17036696fb103b 690 SUPERFAMILY SSF50156 215 346 1.4E-16 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_3579 cd58d170cc67720d4d53617e03638c2b 167 Pfam PF00583 Acetyltransferase (GNAT) family 42 122 5.3E-8 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_3579 cd58d170cc67720d4d53617e03638c2b 167 SUPERFAMILY SSF55729 3 152 3.54E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3579 cd58d170cc67720d4d53617e03638c2b 167 Gene3D G3DSA:3.40.630.30 1 167 2.3E-49 T 12-10-2018 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:2.160.10.10 1 196 1.5E-50 T 12-10-2018 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.811 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 PIRSF PIRSF000456 4 262 2.5E-105 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.0E-107 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.6E-28 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 2.4E-7 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:1.20.1180.10 197 262 8.4E-27 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 YpsIP31758_1025 be82f15e94e118d9b0e5b060f837ec00 262 SUPERFAMILY SSF51161 2 262 1.36E-76 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 PIRSF PIRSF006325 21 263 3.6E-134 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 24 262 1.1E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 SUPERFAMILY SSF53335 40 262 1.16E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 23 262 42.661 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 Gene3D G3DSA:3.40.50.150 38 267 1.5E-66 T 12-10-2018 YpsIP31758_2038 631e762c89ddde1d18f436150e1dd117 267 Pfam PF13649 Methyltransferase domain 80 178 8.2E-14 T 12-10-2018 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 Gene3D G3DSA:1.10.260.40 65 132 2.7E-23 T 12-10-2018 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 SMART SM00530 74 128 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 SUPERFAMILY SSF47413 64 127 3.07E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 2 132 3.7E-61 T 12-10-2018 IPR032758 Antitoxin MqsA/HigA-2 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 Gene3D G3DSA:1.20.58.720 1 64 2.8E-26 T 12-10-2018 YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 4 132 2.0E-43 T 12-10-2018 IPR022452 Antitoxin MqsA YpsIP31758_0889 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 48 2.6E-15 T 12-10-2018 IPR022453 Zinc finger, MqsA-type YpsIP31758_3633 ba9705fcd711cae4966a3f909d1e0f39 206 Gene3D G3DSA:3.10.50.40 68 206 1.7E-49 T 12-10-2018 YpsIP31758_3633 ba9705fcd711cae4966a3f909d1e0f39 206 Gene3D G3DSA:1.10.287.460 5 67 7.8E-18 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 YpsIP31758_3633 ba9705fcd711cae4966a3f909d1e0f39 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 1.3E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YpsIP31758_3633 ba9705fcd711cae4966a3f909d1e0f39 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.1E-22 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YpsIP31758_3633 ba9705fcd711cae4966a3f909d1e0f39 206 SUPERFAMILY SSF54534 8 205 2.81E-54 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 SMART SM00926 58 118 2.4E-8 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Pfam PF01568 Molydopterin dinucleotide binding domain 697 808 1.0E-27 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Pfam PF00384 Molybdopterin oxidoreductase 121 576 3.5E-107 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Gene3D G3DSA:3.40.50.740 419 627 2.9E-49 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 SUPERFAMILY SSF53706 59 699 3.14E-175 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 SUPERFAMILY SSF50692 643 816 4.75E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Gene3D G3DSA:2.40.40.20 672 816 4.5E-41 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Gene3D G3DSA:3.40.228.10 348 418 4.8E-18 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 59 118 9.9E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 733 760 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 63 81 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 519 536 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 Gene3D G3DSA:3.40.50.740 56 324 1.0E-86 T 12-10-2018 YpsIP31758_3261 7c7e21b306d7364e670f5185d9eea6fb 816 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 816 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YpsIP31758_1415 88f0ec251549ed5eb13ed146c9ee7bd1 305 SUPERFAMILY SSF103481 42 138 1.83E-10 T 12-10-2018 YpsIP31758_1415 88f0ec251549ed5eb13ed146c9ee7bd1 305 Pfam PF00892 EamA-like transporter family 150 280 1.6E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1415 88f0ec251549ed5eb13ed146c9ee7bd1 305 Pfam PF00892 EamA-like transporter family 4 135 3.8E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1415 88f0ec251549ed5eb13ed146c9ee7bd1 305 SUPERFAMILY SSF103481 186 285 8.24E-16 T 12-10-2018 YpsIP31758_2546 2b2e469676390c734d470eee4b73bb4e 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.9E-93 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_2546 2b2e469676390c734d470eee4b73bb4e 172 SUPERFAMILY SSF54637 3 169 4.97E-56 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_2546 2b2e469676390c734d470eee4b73bb4e 172 Pfam PF07977 FabA-like domain 29 158 1.6E-52 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_2546 2b2e469676390c734d470eee4b73bb4e 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.068 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YpsIP31758_2546 2b2e469676390c734d470eee4b73bb4e 172 Gene3D G3DSA:3.10.129.10 1 172 9.6E-65 T 12-10-2018 YpsIP31758_3084 7c19dccd14ab2c16d96fe022bbe062d2 567 Gene3D G3DSA:3.40.190.10 116 311 4.2E-26 T 12-10-2018 YpsIP31758_3084 7c19dccd14ab2c16d96fe022bbe062d2 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 1.7E-39 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YpsIP31758_3084 7c19dccd14ab2c16d96fe022bbe062d2 567 SUPERFAMILY SSF53850 122 562 7.24E-51 T 12-10-2018 YpsIP31758_3084 7c19dccd14ab2c16d96fe022bbe062d2 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 348 9.0E-17 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_0504 2124f34bb2a19f498730c5425d186fbc 577 Gene3D G3DSA:3.60.40.10 308 576 3.5E-9 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YpsIP31758_0504 2124f34bb2a19f498730c5425d186fbc 577 Pfam PF13672 Protein phosphatase 2C 316 561 2.3E-56 T 12-10-2018 YpsIP31758_0504 2124f34bb2a19f498730c5425d186fbc 577 SUPERFAMILY SSF81606 323 575 2.88E-10 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YpsIP31758_2006 cd5d9040c065ae598cc9767cca6ce3fd 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 3.0E-7 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein YpsIP31758_2006 cd5d9040c065ae598cc9767cca6ce3fd 148 PIRSF PIRSF006173 1 145 7.9E-66 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 YpsIP31758_2006 cd5d9040c065ae598cc9767cca6ce3fd 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.958 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 SUPERFAMILY SSF46689 60 110 2.91E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 Gene3D G3DSA:1.10.10.60 8 58 1.7E-18 T 12-10-2018 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 SUPERFAMILY SSF46689 11 58 2.42E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 Pfam PF12833 Helix-turn-helix domain 30 108 2.1E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 SMART SM00342 24 107 2.4E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_2387 cb864c2b6602eb2de252a32cbe2fe3e4 128 Gene3D G3DSA:1.10.10.60 59 119 7.5E-17 T 12-10-2018 YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.40.170.20 173 665 2.1E-142 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 SUPERFAMILY SSF56935 39 665 2.52E-126 T 12-10-2018 YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 12-10-2018 IPR010916 TonB box, conserved site YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF00593 TonB dependent receptor 230 663 2.5E-58 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.170.130.10 34 167 7.9E-40 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_2666 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 6.9E-27 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 3.1E-49 T 12-10-2018 IPR012660 Thioesterase, putative YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.40.630.30 2 145 4.7E-25 T 12-10-2018 YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF00583 Acetyltransferase (GNAT) family 25 122 1.8E-13 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 2.5E-50 T 12-10-2018 IPR012660 Thioesterase, putative YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF54637 155 297 3.43E-43 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.10.129.10 147 299 7.2E-46 T 12-10-2018 YpsIP31758_0032 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF55729 2 170 2.36E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 4.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 Gene3D G3DSA:1.10.10.60 131 233 1.3E-25 T 12-10-2018 YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 Pfam PF12833 Helix-turn-helix domain 154 231 1.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 SUPERFAMILY SSF46689 185 232 4.17E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3827 b782d5b08c98f3057a93577ae8222cf5 235 SMART SM00342 148 231 5.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 3.3E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 SUPERFAMILY SSF56784 6 216 2.49E-50 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 1.3E-25 T 12-10-2018 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 Gene3D G3DSA:3.40.50.1000 10 202 2.2E-59 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 Gene3D G3DSA:1.10.150.240 20 91 2.2E-59 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1697 643bf0a6c7a29494749fb01ddde590d1 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 Pfam PF00294 pfkB family carbohydrate kinase 3 282 6.4E-51 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 PRINTS PR00990 Ribokinase signature 172 187 1.2E-22 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 PRINTS PR00990 Ribokinase signature 32 51 1.2E-22 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 PRINTS PR00990 Ribokinase signature 216 227 1.2E-22 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 PRINTS PR00990 Ribokinase signature 5 26 1.2E-22 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 PRINTS PR00990 Ribokinase signature 104 117 1.2E-22 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 SUPERFAMILY SSF53613 1 301 6.24E-73 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 Gene3D G3DSA:3.40.1190.20 1 306 5.2E-82 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_0349 c8b761b0e216c68ec99576a018363cf2 309 Hamap MF_01987 Ribokinase [rbsK]. 1 300 21.014 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 YpsIP31758_0221 ddeebfe1b72b344f65c7885b9e6e67b3 331 Pfam PF12146 Serine aminopeptidase, S33 48 308 2.6E-53 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 YpsIP31758_0221 ddeebfe1b72b344f65c7885b9e6e67b3 331 SUPERFAMILY SSF53474 28 323 4.13E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0221 ddeebfe1b72b344f65c7885b9e6e67b3 331 Gene3D G3DSA:3.40.50.1820 21 329 6.9E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.01 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF51604 23 139 7.42E-10 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF56014 266 332 1.6E-10 T 12-10-2018 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 Gene3D G3DSA:3.30.413.10 262 360 7.7E-22 T 12-10-2018 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 PIRSF PIRSF004640 1 364 2.5E-145 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 Pfam PF04551 GcpE protein 14 354 3.6E-129 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 Gene3D G3DSA:3.20.20.20 1 261 1.4E-103 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YpsIP31758_1186 cab8f99a68acec2aca27ffcdb67ded08 375 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.4E-123 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YpsIP31758_1199 eddc2c68eb9221558a91a5e6647a367c 132 Pfam PF06836 Protein of unknown function (DUF1240) 38 132 5.6E-40 T 12-10-2018 IPR010665 Protein of unknown function DUF1240 YpsIP31758_0068 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 1 163 2.2E-61 T 12-10-2018 YpsIP31758_0068 e6f77053ef1b4653bb800c7edd500469 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 2.1E-125 T 12-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 YpsIP31758_0068 e6f77053ef1b4653bb800c7edd500469 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 313 3.0E-71 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YpsIP31758_0068 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 164 320 1.4E-55 T 12-10-2018 YpsIP31758_0068 e6f77053ef1b4653bb800c7edd500469 321 SUPERFAMILY SSF53756 1 320 2.51E-74 T 12-10-2018 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 192 1.3E-15 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 Gene3D G3DSA:3.60.120.10 2 521 4.2E-197 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 18 516 2.0E-241 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 PRINTS PR00095 Anthranilate synthase component I signature 365 378 1.3E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 PRINTS PR00095 Anthranilate synthase component I signature 460 474 1.3E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 PRINTS PR00095 Anthranilate synthase component I signature 351 364 1.3E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 PRINTS PR00095 Anthranilate synthase component I signature 445 459 1.3E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 SUPERFAMILY SSF56322 9 516 2.22E-165 T 12-10-2018 IPR005801 ADC synthase GO:0009058 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 PIRSF PIRSF001373 1 521 5.9E-250 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_1932 8e60830bafae4d2dec0b056772a78c3b 521 Pfam PF00425 chorismate binding enzyme 243 503 6.3E-85 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YpsIP31758_1202 4dc9d72582f9bb69d9c7560b157350a4 282 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 11 277 3.5E-120 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_1202 4dc9d72582f9bb69d9c7560b157350a4 282 Pfam PF11692 Protein of unknown function (DUF3289) 12 277 1.4E-111 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_0502 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 16 38 2.4E-5 T 12-10-2018 YpsIP31758_0502 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 47 68 2.4E-5 T 12-10-2018 YpsIP31758_0502 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 4.7E-13 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane YpsIP31758_0502 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 1.9E-11 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.30.9.10 59 313 8.3E-130 T 12-10-2018 YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF54373 212 313 2.63E-20 T 12-10-2018 YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 77.871 T 12-10-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.9E-46 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 4 367 8.3E-130 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1564 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF51905 2 370 3.56E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0774 b05485ab3372670a851a42791edf3174 89 Pfam PF04391 Protein of unknown function (DUF533) 1 80 2.1E-22 T 12-10-2018 IPR007486 Inner membrane protein YebE YpsIP31758_0774 b05485ab3372670a851a42791edf3174 89 SUPERFAMILY SSF158682 2 83 1.07E-8 T 12-10-2018 IPR029024 TerB-like YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Pfam PF08245 Mur ligase middle domain 133 313 3.4E-27 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 SUPERFAMILY SSF53623 114 331 1.7E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 30 484 2.2E-182 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Gene3D G3DSA:3.40.50.720 29 116 3.7E-34 T 12-10-2018 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 28 490 43.638 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Gene3D G3DSA:3.40.1190.10 117 331 7.5E-88 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 427 1.7E-20 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Gene3D G3DSA:3.90.190.20 332 500 3.9E-52 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 Pfam PF01225 Mur ligase family, catalytic domain 30 128 8.1E-30 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 SUPERFAMILY SSF51984 29 115 9.16E-29 T 12-10-2018 YpsIP31758_3386 fac199cdce26f7210c025ec9fb91cb79 500 SUPERFAMILY SSF53244 332 486 2.38E-46 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_0069 b97ddfc2376116b3f54ed4ceee071fb2 354 SUPERFAMILY SSF53756 1 345 9.94E-101 T 12-10-2018 YpsIP31758_0069 b97ddfc2376116b3f54ed4ceee071fb2 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 2.8E-162 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 YpsIP31758_0069 b97ddfc2376116b3f54ed4ceee071fb2 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 6.5E-81 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YpsIP31758_0069 b97ddfc2376116b3f54ed4ceee071fb2 354 Gene3D G3DSA:3.40.50.2000 1 151 1.2E-59 T 12-10-2018 YpsIP31758_0069 b97ddfc2376116b3f54ed4ceee071fb2 354 Gene3D G3DSA:3.40.50.2000 164 348 1.3E-66 T 12-10-2018 YpsIP31758_2437 afc53b3e7143e58ba863fec0e28986bc 297 Gene3D G3DSA:3.90.550.10 2 297 3.1E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2437 afc53b3e7143e58ba863fec0e28986bc 297 SUPERFAMILY SSF53448 1 289 4.96E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2437 afc53b3e7143e58ba863fec0e28986bc 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 3.6E-102 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 YpsIP31758_2437 afc53b3e7143e58ba863fec0e28986bc 297 Pfam PF00483 Nucleotidyl transferase 5 252 6.9E-22 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_0378 dfdd6a43a642e045c25b63e2ba0a71e8 155 Pfam PF05433 Glycine zipper 2TM domain 61 102 2.1E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 YpsIP31758_2971 4e3c38fba62c39dd5f3abff8a16e2836 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 1.1E-50 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 Pfam PF00593 TonB dependent receptor 283 752 5.1E-43 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 Gene3D G3DSA:2.40.170.20 205 753 6.8E-153 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 97 753 1.2E-101 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 95 197 1.5E-14 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 Gene3D G3DSA:2.170.130.10 72 204 2.8E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_2440 e6e86582511e433d2ce510a9f6ce89ee 753 SUPERFAMILY SSF56935 87 753 5.04E-112 T 12-10-2018 YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.3E-22 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 SUPERFAMILY SSF75471 1 96 7.19E-31 T 12-10-2018 IPR035920 YhbY-like superfamily YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 Gene3D G3DSA:3.30.110.60 1 97 7.6E-37 T 12-10-2018 IPR035920 YhbY-like superfamily YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 5.6E-38 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 SMART SM01103 3 86 7.0E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 YpsIP31758_3604 524f9a37afb9fd3e90e1f58a348a1b3b 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 YpsIP31758_2500 407fe86bb3acfc9ba8e73f6cdebd3716 497 Gene3D G3DSA:2.70.70.10 18 165 1.8E-13 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2500 407fe86bb3acfc9ba8e73f6cdebd3716 497 SUPERFAMILY SSF51261 31 157 1.57E-7 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2500 407fe86bb3acfc9ba8e73f6cdebd3716 497 Pfam PF01551 Peptidase family M23 42 155 5.0E-6 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_1306 b74a64c3f0b1a59cf90e0ad2577db0ed 460 SUPERFAMILY SSF53300 81 257 1.28E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_1306 b74a64c3f0b1a59cf90e0ad2577db0ed 460 SMART SM00327 83 262 4.8E-26 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_1306 b74a64c3f0b1a59cf90e0ad2577db0ed 460 Pfam PF00092 von Willebrand factor type A domain 85 254 4.1E-23 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_1306 b74a64c3f0b1a59cf90e0ad2577db0ed 460 Gene3D G3DSA:3.40.50.410 86 262 7.3E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_3526 07fe504eae44674083d7e57354a71e1e 96 Gene3D G3DSA:3.30.70.100 1 96 1.3E-37 T 12-10-2018 YpsIP31758_3526 07fe504eae44674083d7e57354a71e1e 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.396 T 12-10-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 YpsIP31758_3526 07fe504eae44674083d7e57354a71e1e 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.0E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain YpsIP31758_3526 07fe504eae44674083d7e57354a71e1e 96 SUPERFAMILY SSF54909 1 91 6.19E-24 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_2371 eca189c194d2d1dbdafd73a1e618fedb 153 PIRSF PIRSF020687 1 152 2.2E-73 T 12-10-2018 IPR009328 Protein of unknown function DUF986 YpsIP31758_2371 eca189c194d2d1dbdafd73a1e618fedb 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 4.4E-66 T 12-10-2018 IPR009328 Protein of unknown function DUF986 YpsIP31758_2371 eca189c194d2d1dbdafd73a1e618fedb 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 2.0E-57 T 12-10-2018 IPR009328 Protein of unknown function DUF986 YpsIP31758_2371 eca189c194d2d1dbdafd73a1e618fedb 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 33.576 T 12-10-2018 IPR009328 Protein of unknown function DUF986 YpsIP31758_1539 4f2eb75c46d89f1bb322ee26d10dd611 334 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 330 2.4E-150 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 YpsIP31758_1539 4f2eb75c46d89f1bb322ee26d10dd611 334 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 7 333 7.3E-153 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 YpsIP31758_2772 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PIRSF PIRSF006865 1 169 6.1E-67 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin YpsIP31758_2772 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Pfam PF03974 Ecotin 36 159 2.0E-49 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin YpsIP31758_2772 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Hamap MF_00706 Ecotin [eco]. 4 169 41.115 T 12-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YpsIP31758_2772 4c15ee05ff015a65a21f1ceb0b17f6bb 169 SUPERFAMILY SSF49772 32 167 4.45E-53 T 12-10-2018 IPR036198 Ecotin superfamily YpsIP31758_2772 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Gene3D G3DSA:2.60.40.550 22 169 4.6E-65 T 12-10-2018 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:1.10.10.10 1 89 9.9E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:3.40.190.10 90 286 6.5E-71 T 12-10-2018 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 SUPERFAMILY SSF53850 88 291 2.02E-38 T 12-10-2018 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 Gene3D G3DSA:3.40.190.10 160 263 6.5E-71 T 12-10-2018 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0262 49bf38f455a39c2ab3818fd1ce0e2db0 317 Pfam PF03466 LysR substrate binding domain 87 288 7.0E-41 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_3717 dc1ab18a09ed3371f1ebd03ca6606a34 250 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 18 250 2.2E-96 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type YpsIP31758_3717 dc1ab18a09ed3371f1ebd03ca6606a34 250 Pfam PF14348 Domain of unknown function (DUF4400) 54 247 8.9E-68 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type YpsIP31758_4154 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_4154 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.9E-23 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_4154 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_4154 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_4154 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_0272 9fad952b466f21439ec4d61544b0c947 210 Pfam PF02036 SCP-2 sterol transfer family 29 122 6.0E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain YpsIP31758_0272 9fad952b466f21439ec4d61544b0c947 210 SUPERFAMILY SSF55718 38 127 4.41E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily YpsIP31758_1339 2250141ec93d6f0761a52366b27c0ef9 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 209 6.5E-98 T 12-10-2018 IPR008517 Protein of unknown function DUF799 YpsIP31758_1339 2250141ec93d6f0761a52366b27c0ef9 218 Gene3D G3DSA:3.40.50.10610 23 189 7.0E-69 T 12-10-2018 YpsIP31758_B0077 08f878d81546b259646d8a5fd901d1f9 335 SUPERFAMILY SSF48371 26 296 7.2E-6 T 12-10-2018 IPR016024 Armadillo-type fold YpsIP31758_2011 bbfa85f7f62484ed0b87b463b434cad4 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-111 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 YpsIP31758_2011 bbfa85f7f62484ed0b87b463b434cad4 270 SUPERFAMILY SSF52540 1 269 1.58E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2011 bbfa85f7f62484ed0b87b463b434cad4 270 Gene3D G3DSA:3.40.50.300 1 260 3.6E-76 T 12-10-2018 YpsIP31758_2011 bbfa85f7f62484ed0b87b463b434cad4 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 2.1E-20 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YpsIP31758_2011 bbfa85f7f62484ed0b87b463b434cad4 270 PIRSF PIRSF003092 1 270 8.0E-99 T 12-10-2018 IPR025501 ATP binding protein MinD YpsIP31758_2678 adfc0878f9d83623c0ee981a6cab878d 158 Gene3D G3DSA:2.60.40.3590 44 158 1.4E-56 T 12-10-2018 YpsIP31758_1454 f37b80ecd176906fec926960d025c8bd 166 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.929 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 YpsIP31758_1454 f37b80ecd176906fec926960d025c8bd 166 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 29 125 3.0E-31 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1454 f37b80ecd176906fec926960d025c8bd 166 Gene3D G3DSA:1.20.58.1610 1 126 8.9E-43 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_1687 dcc9804cae67d267a0e52903a019583d 236 Gene3D G3DSA:2.40.160.40 25 236 4.9E-76 T 12-10-2018 YpsIP31758_1687 dcc9804cae67d267a0e52903a019583d 236 SUPERFAMILY SSF56935 54 236 3.14E-12 T 12-10-2018 YpsIP31758_1687 dcc9804cae67d267a0e52903a019583d 236 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 19 236 1.7E-75 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 5.4E-21 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.295 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 Gene3D G3DSA:3.40.50.1360 1 266 5.9E-116 T 12-10-2018 YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 SUPERFAMILY SSF100950 1 263 1.38E-103 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.2E-138 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 YpsIP31758_2909 4a0c136914f5c115d2e35a487b9b0de8 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 YpsIP31758_3193 df0e7726cd12dc5665bdfc5646977d40 67 Pfam PF13318 Protein of unknown function (DUF4089) 16 65 2.1E-17 T 12-10-2018 IPR025148 Protein of unknown function DUF4089 YpsIP31758_3195 92ae38458b8dcf3e37aaf80d3369ac73 155 Gene3D G3DSA:3.10.450.50 27 155 1.1E-49 T 12-10-2018 YpsIP31758_3195 92ae38458b8dcf3e37aaf80d3369ac73 155 Pfam PF11533 Protein of unknown function (DUF3225) 32 154 1.2E-61 T 12-10-2018 IPR024507 Protein of unknown function DUF3225 YpsIP31758_3195 92ae38458b8dcf3e37aaf80d3369ac73 155 SUPERFAMILY SSF54427 31 153 4.5E-40 T 12-10-2018 IPR032710 NTF2-like domain superfamily YpsIP31758_1732 3c0656ff598bf8eae2309f5fcdd0f397 154 SUPERFAMILY SSF54001 34 154 4.17E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YpsIP31758_1732 3c0656ff598bf8eae2309f5fcdd0f397 154 Pfam PF00877 NlpC/P60 family 47 153 1.4E-27 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YpsIP31758_1732 3c0656ff598bf8eae2309f5fcdd0f397 154 Gene3D G3DSA:3.90.1720.10 32 154 5.7E-38 T 12-10-2018 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF52343 116 245 2.36E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:3.10.20.30 256 340 2.0E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 266 332 8.3E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF54292 234 338 4.98E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00970 Oxidoreductase FAD-binding domain 39 110 2.7E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 291 299 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:2.40.30.10 15 108 4.5E-19 T 12-10-2018 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:3.40.50.80 111 252 3.6E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 61 68 3.2E-7 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 3.2E-7 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 121 140 3.2E-7 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF63380 17 111 2.04E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_2618 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00175 Oxidoreductase NAD-binding domain 122 225 4.7E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YpsIP31758_1406 f0c938a8b095efaba2e4eec93c3d5de5 275 SUPERFAMILY SSF55166 21 271 4.08E-100 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_1406 f0c938a8b095efaba2e4eec93c3d5de5 275 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 273 62.629 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YpsIP31758_1406 f0c938a8b095efaba2e4eec93c3d5de5 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 6.9E-95 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YpsIP31758_1406 f0c938a8b095efaba2e4eec93c3d5de5 275 Gene3D G3DSA:3.30.1380.10 20 273 7.7E-100 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_1406 f0c938a8b095efaba2e4eec93c3d5de5 275 PIRSF PIRSF018455 3 275 9.1E-119 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YpsIP31758_2004 456b886bc97e0bde167caddabd8a5d24 399 Gene3D G3DSA:3.90.1150.10 8 378 3.9E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2004 456b886bc97e0bde167caddabd8a5d24 399 PIRSF PIRSF005572 5 386 4.1E-125 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YpsIP31758_2004 456b886bc97e0bde167caddabd8a5d24 399 Gene3D G3DSA:3.40.640.10 19 263 3.9E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2004 456b886bc97e0bde167caddabd8a5d24 399 SUPERFAMILY SSF53383 3 380 3.76E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2004 456b886bc97e0bde167caddabd8a5d24 399 Pfam PF00266 Aminotransferase class-V 8 371 1.6E-83 T 12-10-2018 IPR000192 Aminotransferase class V domain YpsIP31758_3145 812f8853ec93e9d9c29d6e60af5c6d35 204 SUPERFAMILY SSF53335 16 200 4.02E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3145 812f8853ec93e9d9c29d6e60af5c6d35 204 Pfam PF08241 Methyltransferase domain 16 94 9.3E-20 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 YpsIP31758_3145 812f8853ec93e9d9c29d6e60af5c6d35 204 Gene3D G3DSA:3.40.50.150 5 203 3.5E-43 T 12-10-2018 YpsIP31758_1391 f547a3b3627e15553c14402ede9d2916 164 Gene3D G3DSA:2.40.50.140 30 143 3.4E-43 T 12-10-2018 YpsIP31758_1391 f547a3b3627e15553c14402ede9d2916 164 SUPERFAMILY SSF82093 30 143 3.27E-41 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 YpsIP31758_1391 f547a3b3627e15553c14402ede9d2916 164 Pfam PF03100 CcmE 4 137 1.2E-44 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 YpsIP31758_1391 f547a3b3627e15553c14402ede9d2916 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.157 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 YpsIP31758_0655 b9c2d296652e1fd4f26c59e00a428534 428 Pfam PF07196 Flagellin hook IN motif 129 178 2.7E-5 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YpsIP31758_0655 b9c2d296652e1fd4f26c59e00a428534 428 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 7 103 1.2E-13 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YpsIP31758_0655 b9c2d296652e1fd4f26c59e00a428534 428 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 209 415 6.3E-23 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 YpsIP31758_1116 0c2f3ef8505972d73b2c5304a8a16770 316 SUPERFAMILY SSF50891 173 288 1.14E-11 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_1116 0c2f3ef8505972d73b2c5304a8a16770 316 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 8.1E-90 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B YpsIP31758_1116 0c2f3ef8505972d73b2c5304a8a16770 316 SMART SM00797 23 298 8.0E-146 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B YpsIP31758_1116 0c2f3ef8505972d73b2c5304a8a16770 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 1.2E-118 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B YpsIP31758_1116 0c2f3ef8505972d73b2c5304a8a16770 316 Gene3D G3DSA:2.40.100.10 170 309 2.7E-55 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily YpsIP31758_2786 93709ee9d482dfef5209e792997d8f01 310 Gene3D G3DSA:3.40.190.120 133 246 5.9E-96 T 12-10-2018 YpsIP31758_2786 93709ee9d482dfef5209e792997d8f01 310 SUPERFAMILY SSF53850 29 308 4.89E-60 T 12-10-2018 YpsIP31758_2786 93709ee9d482dfef5209e792997d8f01 310 Gene3D G3DSA:3.40.190.10 32 306 5.9E-96 T 12-10-2018 YpsIP31758_2786 93709ee9d482dfef5209e792997d8f01 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 303 1.4E-54 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 Pfam PF00005 ABC transporter 59 210 2.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 SUPERFAMILY SSF52540 44 282 6.44E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 262 327 2.3E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 ProSitePatterns PS00211 ABC transporters family signature. 183 197 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 Gene3D G3DSA:3.40.50.300 32 357 7.7E-95 T 12-10-2018 YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 SMART SM00382 68 260 2.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4071 8d3febac8c29463c8bcef2d5c2e3ab9e 358 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 261 345 4.1E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_0647 f3a97363b391ac4d53987474bfbd3502 97 Pfam PF10135 Rod binding protein 42 93 9.9E-12 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal YpsIP31758_2090 ec805fcec23f7bee299eedfdbc5ec8b2 301 Gene3D G3DSA:1.25.10.10 201 300 2.1E-5 T 12-10-2018 IPR011989 Armadillo-like helical YpsIP31758_2090 ec805fcec23f7bee299eedfdbc5ec8b2 301 Pfam PF13646 HEAT repeats 222 292 2.3E-9 T 12-10-2018 YpsIP31758_2090 ec805fcec23f7bee299eedfdbc5ec8b2 301 SUPERFAMILY SSF48371 201 291 4.41E-6 T 12-10-2018 IPR016024 Armadillo-type fold YpsIP31758_3424 9a56f398f471b0cd8996afbeb8e4b803 163 Gene3D G3DSA:2.60.40.4150 34 163 2.3E-5 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_3424 9a56f398f471b0cd8996afbeb8e4b803 163 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 133 4.7E-11 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_3424 9a56f398f471b0cd8996afbeb8e4b803 163 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 152 2.6E-19 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 Pfam PF13431 Tetratricopeptide repeat 90 122 1.6E-5 T 12-10-2018 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 1.6E-81 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 Gene3D G3DSA:1.25.40.10 32 247 7.3E-41 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 SUPERFAMILY SSF48452 37 200 1.95E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 33 66 0.001 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 137 170 7.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 SMART SM00028 67 100 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_1184 146e35dca96e0e29e0542f8819dcb9ab 249 Pfam PF13181 Tetratricopeptide repeat 36 66 1.2E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.692 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 Gene3D G3DSA:3.20.20.70 1 222 9.5E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 SMART SM01133 4 215 1.0E-94 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 1.1E-82 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 PIRSF PIRSF001357 1 222 7.7E-72 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 SUPERFAMILY SSF51569 3 216 6.59E-78 T 12-10-2018 YpsIP31758_2652 d2bc3b8ff2db480826e7b3335fcbd94a 223 Pfam PF01791 DeoC/LacD family aldolase 7 212 2.9E-18 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_A0040 208b7e27a17315efbe7bdc16111a29d1 105 ProDom PD030350 PLASMID KLEE KCRB3 STABLE INHERITANCE MEMBRANE TRANSMEMBRANE 1 102 8.0E-20 T 12-10-2018 IPR035362 Protein KleE YpsIP31758_A0040 208b7e27a17315efbe7bdc16111a29d1 105 Pfam PF17394 Uncharacterized KleE stable inheritance protein 1 101 4.9E-31 T 12-10-2018 IPR035362 Protein KleE YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Gene3D G3DSA:3.30.70.1660 282 360 3.8E-15 T 12-10-2018 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Gene3D G3DSA:3.30.70.1660 107 221 4.2E-46 T 12-10-2018 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.904 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 SUPERFAMILY SSF75620 12 353 4.97E-135 T 12-10-2018 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 SMART SM00937 63 178 5.6E-70 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Pfam PF03462 PCRF domain 12 203 2.6E-74 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Gene3D G3DSA:3.30.160.20 222 281 4.0E-35 T 12-10-2018 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 Pfam PF00472 RF-1 domain 216 321 2.2E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YpsIP31758_2066 af3a46b32065ced1e54240d0d83835c0 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 5.3E-172 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 SUPERFAMILY SSF52540 1 210 1.1E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 8.9E-102 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:3.40.50.300 1 140 5.1E-48 T 12-10-2018 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 SUPERFAMILY SSF48019 212 335 4.93E-36 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.1E-44 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 9.4E-64 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:1.10.8.60 143 213 1.7E-26 T 12-10-2018 YpsIP31758_2928 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:1.20.272.10 214 343 2.0E-48 T 12-10-2018 YpsIP31758_0759 fe313b39f2503407913abd398726d373 291 SUPERFAMILY SSF52540 26 246 2.45E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0759 fe313b39f2503407913abd398726d373 291 Gene3D G3DSA:3.40.50.300 32 223 2.0E-33 T 12-10-2018 YpsIP31758_0759 fe313b39f2503407913abd398726d373 291 Pfam PF01926 50S ribosome-binding GTPase 39 152 7.7E-15 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_0304 68fad138996df6310278ae767dae9920 296 Gene3D G3DSA:1.10.3720.10 1 283 2.9E-72 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0304 68fad138996df6310278ae767dae9920 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 5.9E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0304 68fad138996df6310278ae767dae9920 296 SUPERFAMILY SSF161098 8 296 1.96E-68 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF82114 174 307 1.68E-43 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 SMART SM00904 183 307 3.0E-62 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 PIRSF PIRSF004491 1 310 4.3E-103 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF01687 Riboflavin kinase 184 306 1.6E-37 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 7.8E-113 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:2.40.30.30 188 310 6.0E-38 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF52374 15 175 1.69E-36 T 12-10-2018 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF06574 FAD synthetase 12 167 4.3E-57 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:3.40.50.620 1 186 1.9E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3461 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 51 2.0E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:2.40.30.10 188 339 8.0E-128 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.7E-8 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.7E-8 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.7E-8 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:1.10.8.260 262 322 8.0E-128 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 Gene3D G3DSA:3.50.50.60 7 388 8.0E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 1.0E-128 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 SUPERFAMILY SSF160996 190 338 3.53E-43 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 SUPERFAMILY SSF51905 3 395 3.62E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-5 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.8E-5 T 12-10-2018 YpsIP31758_4032 b5cb2d0782a53db487fcba5b5fb34bf1 398 Pfam PF03486 HI0933-like protein 4 392 5.5E-157 T 12-10-2018 YpsIP31758_2063 ebc4341aa1df9cfc44a0ddb2bbe78611 269 SUPERFAMILY SSF48452 190 258 1.92E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_2063 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 7.4E-44 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YpsIP31758_2063 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.4E-25 T 12-10-2018 YpsIP31758_2142 7388bbb3059ac554d546a37cc848a786 546 Gene3D G3DSA:1.20.1250.20 13 200 4.4E-24 T 12-10-2018 YpsIP31758_2142 7388bbb3059ac554d546a37cc848a786 546 SUPERFAMILY SSF103473 16 439 6.54E-47 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2142 7388bbb3059ac554d546a37cc848a786 546 Gene3D G3DSA:1.20.1250.20 278 451 8.2E-14 T 12-10-2018 YpsIP31758_2142 7388bbb3059ac554d546a37cc848a786 546 Pfam PF07690 Major Facilitator Superfamily 23 430 2.4E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 PIRSF PIRSF006487 1 363 1.1E-81 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:3.30.70.1400 51 138 3.4E-89 T 12-10-2018 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 4.3E-19 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:2.40.30.110 277 365 1.1E-33 T 12-10-2018 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 SUPERFAMILY SSF101790 276 360 2.29E-24 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.796 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:4.10.1250.10 232 276 1.1E-26 T 12-10-2018 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 SUPERFAMILY SSF103025 3 277 8.63E-93 T 12-10-2018 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.9E-152 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 6.5E-84 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain YpsIP31758_0863 bb2ef0d9bee1015c42a59176b321659e 365 Gene3D G3DSA:3.30.1360.120 6 231 3.4E-89 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 Pfam PF01230 HIT domain 12 109 5.6E-30 T 12-10-2018 IPR001310 Histidine triad (HIT) protein YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 Gene3D G3DSA:3.30.428.10 1 117 1.2E-36 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 SUPERFAMILY SSF54197 2 112 2.47E-36 T 12-10-2018 IPR036265 HIT-like superfamily YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein YpsIP31758_1588 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein YpsIP31758_1258 ee2dc55a5039316ef845c38008351e46 354 Gene3D G3DSA:3.40.190.10 37 336 1.2E-113 T 12-10-2018 YpsIP31758_1258 ee2dc55a5039316ef845c38008351e46 354 Pfam PF13416 Bacterial extracellular solute-binding protein 51 311 5.9E-22 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_1258 ee2dc55a5039316ef845c38008351e46 354 Gene3D G3DSA:3.40.190.10 134 349 1.2E-113 T 12-10-2018 YpsIP31758_1258 ee2dc55a5039316ef845c38008351e46 354 SUPERFAMILY SSF53850 32 331 4.03E-52 T 12-10-2018 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 SUPERFAMILY SSF56784 1 157 1.0E-36 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.1E-63 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Gene3D G3DSA:3.30.230.40 255 355 1.7E-35 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 SUPERFAMILY SSF54211 167 251 5.31E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 8.2E-44 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Gene3D G3DSA:3.30.230.40 163 254 4.6E-34 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Pfam PF13242 HAD-hyrolase-like 103 146 5.9E-5 T 12-10-2018 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 9.0E-24 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.127 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.572 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 Gene3D G3DSA:3.40.50.1000 1 162 1.0E-42 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2431 cc79d6eac564e29ff9cb18330c8b3f4e 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.3E-76 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 28.232 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF55060 173 289 5.4E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PIRSF PIRSF000676 1 308 9.4E-83 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 Pfam PF08544 GHMP kinases C terminal 215 280 2.8E-8 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 6.1E-113 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.7E-32 T 12-10-2018 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.7E-32 T 12-10-2018 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.7E-32 T 12-10-2018 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.7E-32 T 12-10-2018 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.7E-32 T 12-10-2018 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.70.890 168 277 5.1E-102 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.230.10 4 167 5.1E-102 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 9.1E-14 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 YpsIP31758_3475 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF54211 1 178 3.11E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.55 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 6.8E-55 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.0E-60 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 SMART SM01374 1 123 2.8E-86 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 Gene3D G3DSA:2.40.150.20 1 123 2.9E-57 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3904 13b85a28b0b4b309ba6e7945e5bc55a1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_2224 23722b869f85571b6236a8898a4731c1 461 Pfam PF06381 Protein of unknown function (DUF1073) 49 391 3.2E-102 T 12-10-2018 IPR024459 Protein of unknown function DUF1073 YpsIP31758_2224 23722b869f85571b6236a8898a4731c1 461 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 18 414 1.2E-76 T 12-10-2018 IPR006445 Phage-associated protein HI1409 YpsIP31758_3820 001168f87603c8f095272487c52064cf 215 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 28 195 1.3E-37 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL YpsIP31758_3820 001168f87603c8f095272487c52064cf 215 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 19 188 6.1E-7 T 12-10-2018 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YpsIP31758_1780 26fc107a0fedc0f5116b765514bcf27b 271 SMART SM00382 39 228 2.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1780 26fc107a0fedc0f5116b765514bcf27b 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1780 26fc107a0fedc0f5116b765514bcf27b 271 SUPERFAMILY SSF52540 5 249 9.82E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1780 26fc107a0fedc0f5116b765514bcf27b 271 Pfam PF00005 ABC transporter 31 178 3.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1780 26fc107a0fedc0f5116b765514bcf27b 271 Gene3D G3DSA:3.40.50.300 3 268 3.9E-74 T 12-10-2018 YpsIP31758_1947 d9ba8f11853742ea1007f1c739ca42e9 98 Pfam PF03795 YCII-related domain 1 95 3.1E-28 T 12-10-2018 IPR005545 YCII-related YpsIP31758_1947 d9ba8f11853742ea1007f1c739ca42e9 98 Gene3D G3DSA:3.30.70.1060 1 98 2.4E-38 T 12-10-2018 YpsIP31758_1947 d9ba8f11853742ea1007f1c739ca42e9 98 SUPERFAMILY SSF54909 1 98 2.68E-31 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_0098 848d271687aee95398fa218e230bf2ea 153 Pfam PF05656 Protein of unknown function (DUF805) 16 141 9.2E-22 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 PIRSF PIRSF001491 1 407 3.3E-167 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 Gene3D G3DSA:3.40.720.10 3 406 4.1E-157 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 SUPERFAMILY SSF53649 1 407 1.31E-74 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 5.1E-196 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 Gene3D G3DSA:3.30.70.1250 115 238 4.1E-157 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.299 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 SUPERFAMILY SSF143856 117 235 2.09E-50 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 YpsIP31758_3496 f72953eaa3ee31116a9f2168ebd3afb4 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.3E-44 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YpsIP31758_3569 e4e1c7fd542aae0f555363201c4bc547 212 Gene3D G3DSA:3.40.50.720 1 210 1.7E-49 T 12-10-2018 YpsIP31758_3569 e4e1c7fd542aae0f555363201c4bc547 212 SUPERFAMILY SSF51735 1 199 2.34E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3569 e4e1c7fd542aae0f555363201c4bc547 212 SMART SM00859 3 101 0.0029 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YpsIP31758_1540 836574fa37abd3e91d928173432b81e1 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 6.9E-65 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YpsIP31758_1540 836574fa37abd3e91d928173432b81e1 184 Gene3D G3DSA:3.30.70.2540 1 184 1.2E-60 T 12-10-2018 YpsIP31758_1540 836574fa37abd3e91d928173432b81e1 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 184 1.8E-70 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YpsIP31758_0812 9aa2a158ed93fee4215e83cd80c89b1b 319 SUPERFAMILY SSF53822 23 314 1.25E-61 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0812 9aa2a158ed93fee4215e83cd80c89b1b 319 Gene3D G3DSA:3.40.50.2300 128 270 1.4E-70 T 12-10-2018 YpsIP31758_0812 9aa2a158ed93fee4215e83cd80c89b1b 319 Pfam PF13407 Periplasmic binding protein domain 27 290 1.3E-40 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_0812 9aa2a158ed93fee4215e83cd80c89b1b 319 Gene3D G3DSA:3.40.50.2300 28 290 1.4E-70 T 12-10-2018 YpsIP31758_2135 0f71c391e259d27f3c4909e55e050f13 165 SUPERFAMILY SSF52833 25 161 1.68E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_2135 0f71c391e259d27f3c4909e55e050f13 165 Gene3D G3DSA:3.40.30.10 18 165 2.2E-36 T 12-10-2018 YpsIP31758_2135 0f71c391e259d27f3c4909e55e050f13 165 Pfam PF00578 AhpC/TSA family 28 141 1.7E-19 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.4E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.0E-52 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 Gene3D G3DSA:3.100.10.10 70 144 1.4E-11 T 12-10-2018 YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.307 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 YpsIP31758_3895 59daddab34c70f927432b384a57d2e31 144 SUPERFAMILY SSF52080 4 143 7.72E-47 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily YpsIP31758_2400 fbd4a2b90f09b2a0464c30bd021f9900 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 1.8E-22 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ YpsIP31758_0007 4d111f438c7fc1cfc812338d3e7a6872 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.831 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 YpsIP31758_0007 4d111f438c7fc1cfc812338d3e7a6872 139 SUPERFAMILY SSF102546 1 139 3.14E-44 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_0007 4d111f438c7fc1cfc812338d3e7a6872 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.2E-49 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_0007 4d111f438c7fc1cfc812338d3e7a6872 139 Gene3D G3DSA:3.40.1650.10 8 136 2.1E-36 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_0472 0e001aa0f78fea1d46e557016323d82a 191 SMART SM00749 129 190 3.1E-4 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria YpsIP31758_0472 0e001aa0f78fea1d46e557016323d82a 191 SMART SM00749 51 114 2.0E-8 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria YpsIP31758_0472 0e001aa0f78fea1d46e557016323d82a 191 Pfam PF04972 BON domain 46 114 2.0E-13 T 12-10-2018 IPR007055 BON domain YpsIP31758_0472 0e001aa0f78fea1d46e557016323d82a 191 Pfam PF04972 BON domain 125 190 6.1E-18 T 12-10-2018 IPR007055 BON domain YpsIP31758_3020 601cd673405fd2c06a9527478ae821ab 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3020 601cd673405fd2c06a9527478ae821ab 228 SUPERFAMILY SSF52540 6 227 5.82E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3020 601cd673405fd2c06a9527478ae821ab 228 Pfam PF00005 ABC transporter 27 174 6.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3020 601cd673405fd2c06a9527478ae821ab 228 Gene3D G3DSA:3.40.50.300 4 228 5.1E-62 T 12-10-2018 YpsIP31758_3020 601cd673405fd2c06a9527478ae821ab 228 SMART SM00382 35 223 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_B0110 a9cfd8bd1303e77499bd5b0e9c65e9b5 387 Pfam PF00437 Type II/IV secretion system protein 134 317 1.9E-26 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_B0110 a9cfd8bd1303e77499bd5b0e9c65e9b5 387 SUPERFAMILY SSF52540 26 379 5.12E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0110 a9cfd8bd1303e77499bd5b0e9c65e9b5 387 Gene3D G3DSA:3.40.50.300 143 386 1.3E-54 T 12-10-2018 YpsIP31758_3622 7d38206f9287b25ac9b17ec19e539a06 175 SUPERFAMILY SSF50324 3 175 4.45E-67 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 YpsIP31758_3622 7d38206f9287b25ac9b17ec19e539a06 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.6E-55 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 YpsIP31758_3622 7d38206f9287b25ac9b17ec19e539a06 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.024 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 YpsIP31758_3622 7d38206f9287b25ac9b17ec19e539a06 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 YpsIP31758_3622 7d38206f9287b25ac9b17ec19e539a06 175 Gene3D G3DSA:3.90.80.10 2 175 1.4E-70 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 YpsIP31758_B0103 7c1f7ffd70421301af52da1a26201869 319 SUPERFAMILY SSF52833 149 308 4.29E-8 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_B0103 7c1f7ffd70421301af52da1a26201869 319 Gene3D G3DSA:3.40.30.10 162 314 5.8E-14 T 12-10-2018 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:3.40.50.300 429 633 2.4E-47 T 12-10-2018 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 SMART SM00490 517 601 4.9E-15 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 8.4E-156 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:3.30.360.80 713 786 9.0E-32 T 12-10-2018 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 3.1E-14 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:2.30.30.930 55 114 3.3E-28 T 12-10-2018 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 SMART SM00487 150 342 2.3E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:2.30.30.140 1 53 3.4E-23 T 12-10-2018 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 2.9E-19 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 SUPERFAMILY SSF52540 125 377 2.48E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 SUPERFAMILY SSF52540 273 644 1.11E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 28.971 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 YpsIP31758_3419 38b7434124b1e6a4938bf6050754426d 968 Gene3D G3DSA:3.40.50.10810 150 428 2.6E-109 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily YpsIP31758_3102 b1d095d7abde1282fc5c84108e80ec16 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site YpsIP31758_3102 b1d095d7abde1282fc5c84108e80ec16 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 2.3E-91 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 YpsIP31758_3102 b1d095d7abde1282fc5c84108e80ec16 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.338 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 YpsIP31758_3102 b1d095d7abde1282fc5c84108e80ec16 295 Gene3D G3DSA:1.10.357.140 13 181 1.7E-18 T 12-10-2018 YpsIP31758_3102 b1d095d7abde1282fc5c84108e80ec16 295 Pfam PF01040 UbiA prenyltransferase family 18 266 2.1E-59 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF00005 ABC transporter 24 181 1.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 SUPERFAMILY SSF52540 32 304 4.61E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 SMART SM00382 32 231 4.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 Gene3D G3DSA:3.40.50.300 1 321 4.3E-93 T 12-10-2018 YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 9.0E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 3.1E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YpsIP31758_4072 81f7fca0c7730009df0ef4e6c1599eb5 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3142 86d201e8eb4b19d1b44654d247835418 95 Gene3D G3DSA:2.60.120.10 1 94 9.3E-32 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3142 86d201e8eb4b19d1b44654d247835418 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.6E-32 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 YpsIP31758_3142 86d201e8eb4b19d1b44654d247835418 95 SUPERFAMILY SSF51182 1 94 1.53E-31 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_3142 86d201e8eb4b19d1b44654d247835418 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 94 24.979 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 YpsIP31758_B0114 de60140b104f9f8d75b9a5209cc5641c 264 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 79 256 1.0E-25 T 12-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 SMART SM00861 1 171 7.2E-30 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 4.5E-29 T 12-10-2018 IPR033248 Transketolase, C-terminal domain YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52518 6 173 3.93E-37 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52922 176 311 1.2E-31 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.970 3 176 3.1E-43 T 12-10-2018 YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02779 Transketolase, pyrimidine binding domain 44 167 2.2E-18 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YpsIP31758_3248 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.920 181 313 4.4E-34 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YpsIP31758_3742 40ab5a167628a66ef59ed2b2091e2d95 252 Pfam PF08900 Domain of unknown function (DUF1845) 9 226 2.5E-68 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 YpsIP31758_3742 40ab5a167628a66ef59ed2b2091e2d95 252 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 10 228 4.1E-78 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 YpsIP31758_1777 50ee570cc0dc1171a3bce4fd3aa2ef06 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 8.5E-47 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 Gene3D G3DSA:3.40.605.10 27 479 3.9E-180 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 36 482 1.5E-202 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 Pfam PF00171 Aldehyde dehydrogenase family 29 483 5.6E-170 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 SUPERFAMILY SSF53720 15 487 1.96E-168 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 Gene3D G3DSA:3.40.309.10 267 456 3.9E-180 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_0422 a586569151d39ca215c05ce10ba8d53d 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 Gene3D G3DSA:3.40.50.300 1 244 3.1E-75 T 12-10-2018 YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 SUPERFAMILY SSF52540 4 249 8.57E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 SMART SM00382 28 217 8.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 SUPERFAMILY SSF50331 243 330 1.45E-5 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_1260 3b482a623d19cfdfc9d3f7d414d4626a 356 Pfam PF00005 ABC transporter 19 167 4.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0215 3831f2924869941e764b49e39660f68f 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 7.0E-99 T 12-10-2018 IPR004626 RarD protein GO:0005887 YpsIP31758_0215 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 42 146 1.96E-16 T 12-10-2018 YpsIP31758_0215 3831f2924869941e764b49e39660f68f 296 Pfam PF00892 EamA-like transporter family 9 142 2.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_0215 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 190 285 1.44E-6 T 12-10-2018 YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04993 TfoX N-terminal domain 18 105 2.1E-26 T 12-10-2018 IPR007076 TfoX, N-terminal YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:1.10.150.20 116 204 1.7E-20 T 12-10-2018 YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 SUPERFAMILY SSF159894 16 106 1.12E-27 T 12-10-2018 YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04994 TfoX C-terminal domain 119 196 7.8E-23 T 12-10-2018 IPR007077 TfoX, C-terminal YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PIRSF PIRSF028788 1 205 6.9E-61 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type YpsIP31758_2539 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:3.30.1460.30 5 108 6.4E-28 T 12-10-2018 YpsIP31758_2916 0dc02922f4ee82f2eb3fc7526eb1737a 357 Gene3D G3DSA:3.40.50.300 121 327 1.3E-74 T 12-10-2018 YpsIP31758_2916 0dc02922f4ee82f2eb3fc7526eb1737a 357 Pfam PF02562 PhoH-like protein 124 327 6.3E-95 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 YpsIP31758_2916 0dc02922f4ee82f2eb3fc7526eb1737a 357 SUPERFAMILY SSF52540 123 299 1.82E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2283 b4f3eaa3854ff95fd8c0952de2f64053 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 455 3.5E-63 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 YpsIP31758_2283 b4f3eaa3854ff95fd8c0952de2f64053 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.7E-21 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YpsIP31758_2283 b4f3eaa3854ff95fd8c0952de2f64053 466 Pfam PF07196 Flagellin hook IN motif 128 185 2.4E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YpsIP31758_2912 5617475800bc71c40f24777581194307 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.3E-23 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA YpsIP31758_2912 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 71 174 2.7E-83 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2912 5617475800bc71c40f24777581194307 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 4.6E-63 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA YpsIP31758_2912 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 6 232 2.7E-83 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2912 5617475800bc71c40f24777581194307 250 SUPERFAMILY SSF56784 1 247 6.67E-64 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_2912 5617475800bc71c40f24777581194307 250 Pfam PF13242 HAD-hyrolase-like 174 246 5.2E-20 T 12-10-2018 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 SUPERFAMILY SSF55120 29 206 1.01E-40 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 Gene3D G3DSA:3.30.70.580 19 94 1.9E-27 T 12-10-2018 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 2.7E-11 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 4.5E-57 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YpsIP31758_1614 ec6fa806182cfc7fa362bf7b58add7b1 208 Gene3D G3DSA:3.30.70.1560 95 195 3.8E-40 T 12-10-2018 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 SUPERFAMILY SSF53335 185 289 1.77E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 Pfam PF01728 FtsJ-like methyltransferase 187 280 3.2E-7 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 Gene3D G3DSA:3.30.2300.20 81 176 2.3E-38 T 12-10-2018 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 Gene3D G3DSA:3.30.70.2810 1 80 1.2E-33 T 12-10-2018 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 Gene3D G3DSA:3.40.50.150 177 358 1.7E-57 T 12-10-2018 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 PIRSF PIRSF028774 2 361 5.9E-195 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YpsIP31758_1001 95ded84fba72e736f936e074e1bb7057 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.448 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YpsIP31758_1373 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 3.9E-45 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal YpsIP31758_1373 af213a5d90f3e235464913e94003e5b1 1275 SUPERFAMILY SSF52540 185 358 2.6E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1373 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF06761 Intracellular multiplication and human macrophage-killing 586 898 4.6E-68 T 12-10-2018 IPR009612 ImcF-related YpsIP31758_1373 af213a5d90f3e235464913e94003e5b1 1275 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 72 1267 5.6E-244 T 12-10-2018 IPR017731 Type VI secretion system, IcmF YpsIP31758_1373 af213a5d90f3e235464913e94003e5b1 1275 Pfam PF14331 ImcF-related N-terminal domain 253 535 4.8E-75 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain YpsIP31758_2705 f001e2a207e31945212ebbf250c49a57 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 1.8E-5 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YpsIP31758_2705 f001e2a207e31945212ebbf250c49a57 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 170 2.5E-39 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YpsIP31758_2705 f001e2a207e31945212ebbf250c49a57 327 SUPERFAMILY SSF52540 6 167 3.15E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2705 f001e2a207e31945212ebbf250c49a57 327 Gene3D G3DSA:3.40.50.300 2 194 1.1E-44 T 12-10-2018 YpsIP31758_2705 f001e2a207e31945212ebbf250c49a57 327 SMART SM00833 239 322 0.0081 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YpsIP31758_2156 835cfa5ec92c1a11ecc319cb4e637d97 280 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 222 7.4E-37 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YpsIP31758_2156 835cfa5ec92c1a11ecc319cb4e637d97 280 Gene3D G3DSA:3.20.20.60 5 240 2.6E-89 T 12-10-2018 YpsIP31758_2156 835cfa5ec92c1a11ecc319cb4e637d97 280 PIRSF PIRSF015582 1 280 2.6E-79 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like YpsIP31758_2156 835cfa5ec92c1a11ecc319cb4e637d97 280 SUPERFAMILY SSF51621 7 233 3.84E-59 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_1593 6be613777a2c2558c790c84c287d8c3e 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.987 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 YpsIP31758_1593 6be613777a2c2558c790c84c287d8c3e 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-71 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YpsIP31758_1593 6be613777a2c2558c790c84c287d8c3e 180 SUPERFAMILY SSF53474 1 176 4.39E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1593 6be613777a2c2558c790c84c287d8c3e 180 Gene3D G3DSA:3.40.50.1820 1 179 1.2E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0652 bd403c31406766e94330f82f0afbc9f8 348 SUPERFAMILY SSF46894 15 109 1.76E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_0652 bd403c31406766e94330f82f0afbc9f8 348 Gene3D G3DSA:1.10.10.10 3 114 1.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0652 bd403c31406766e94330f82f0afbc9f8 348 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 109 2.2E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_0652 bd403c31406766e94330f82f0afbc9f8 348 SMART SM00862 34 109 1.3E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3062 ff66418a3665dc58f7172eeeefcc96b7 178 Pfam PF07445 Primosomal replication protein priC 9 175 3.3E-54 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC YpsIP31758_3062 ff66418a3665dc58f7172eeeefcc96b7 178 Gene3D G3DSA:1.20.1270.340 1 98 1.4E-33 T 12-10-2018 IPR038338 PriB/PriC superfamily YpsIP31758_1298 26849615a7bc986ec7659eedf6222bc7 510 SUPERFAMILY SSF103473 20 469 1.44E-67 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1298 26849615a7bc986ec7659eedf6222bc7 510 Hamap MF_01238 Sialic acid transporter NanT [nanT]. 15 510 50.57 T 12-10-2018 IPR004742 Sialic acid transporter GO:0015136|GO:0015739|GO:0016021 YpsIP31758_1298 26849615a7bc986ec7659eedf6222bc7 510 Gene3D G3DSA:1.20.1250.20 25 231 8.8E-39 T 12-10-2018 YpsIP31758_1298 26849615a7bc986ec7659eedf6222bc7 510 Gene3D G3DSA:1.20.1250.20 290 473 5.4E-21 T 12-10-2018 YpsIP31758_1298 26849615a7bc986ec7659eedf6222bc7 510 Pfam PF07690 Major Facilitator Superfamily 39 308 9.2E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.1E-36 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.5E-159 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3390 60e68760b7314a5bae42de853d152172 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 26.007 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 Pfam PF01464 Transglycosylase SLT domain 480 590 1.2E-33 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 SUPERFAMILY SSF53955 473 635 1.97E-50 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.10.530.10 467 639 7.1E-53 T 12-10-2018 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.4E-25 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 SUPERFAMILY SSF48435 23 471 1.31E-139 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.10.1240.20 397 466 2.1E-28 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YpsIP31758_3484 a43eb4e740867e1fc00c58e0a73dbcc0 639 Gene3D G3DSA:1.25.20.10 23 383 2.7E-120 T 12-10-2018 YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 SMART SM00247 26 110 0.088 T 12-10-2018 IPR001064 Beta/gamma crystallin YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 SMART SM00247 112 207 2.0E-4 T 12-10-2018 IPR001064 Beta/gamma crystallin YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 SUPERFAMILY SSF49695 14 108 2.98E-15 T 12-10-2018 IPR011024 Gamma-crystallin-like YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 Gene3D G3DSA:2.60.20.10 111 207 4.9E-23 T 12-10-2018 YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 Gene3D G3DSA:2.60.20.10 7 110 1.6E-19 T 12-10-2018 YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 Pfam PF08964 Beta/Gamma crystallin 25 89 4.2E-7 T 12-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 Pfam PF09101 Exotoxin A binding 341 403 2.4E-5 T 12-10-2018 IPR015185 Exotoxin A, binding YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 SUPERFAMILY SSF49695 110 206 8.84E-18 T 12-10-2018 IPR011024 Gamma-crystallin-like YpsIP31758_1181 0f51828457ffb67eeea2f5b75e6c003c 806 Pfam PF00030 Beta/Gamma crystallin 113 206 1.4E-6 T 12-10-2018 IPR001064 Beta/gamma crystallin YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 283 434 3.2E-60 T 12-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 Gene3D G3DSA:3.40.1080.10 1 195 3.6E-57 T 12-10-2018 YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 SUPERFAMILY SSF100950 4 232 2.58E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 Gene3D G3DSA:3.30.750.70 200 298 8.1E-35 T 12-10-2018 YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 195 3.2E-14 T 12-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 SUPERFAMILY SSF100950 209 438 3.68E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2158 6855acd4f4be405f0bc1d5f43e74ddf8 440 Gene3D G3DSA:3.40.1080.20 301 440 1.5E-56 T 12-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.3E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 8.5E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 SUPERFAMILY SSF56801 9 643 1.19E-188 T 12-10-2018 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.174 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:3.30.300.30 518 652 6.9E-34 T 12-10-2018 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Pfam PF00501 AMP-binding enzyme 83 522 2.5E-92 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 Gene3D G3DSA:3.40.50.12780 52 515 5.5E-104 T 12-10-2018 YpsIP31758_3835 4624d2d0dd3ce7c8ac19b27d955a19bc 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_1711 d5ce5a01af607ab6f54f1ace5673e1e4 70 Pfam PF13619 KTSC domain 7 64 5.1E-24 T 12-10-2018 IPR025309 KTSC domain YpsIP31758_2842 14c416bf1d1221cfe6d6a2133881cb79 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 20 266 29.154 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 YpsIP31758_2842 14c416bf1d1221cfe6d6a2133881cb79 267 Gene3D G3DSA:3.40.50.150 27 214 1.9E-34 T 12-10-2018 YpsIP31758_2842 14c416bf1d1221cfe6d6a2133881cb79 267 SUPERFAMILY SSF53335 26 261 5.37E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2842 14c416bf1d1221cfe6d6a2133881cb79 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 28 266 4.0E-65 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 YpsIP31758_2842 14c416bf1d1221cfe6d6a2133881cb79 267 Pfam PF08241 Methyltransferase domain 63 154 1.4E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 YpsIP31758_3007 528132346aa964be9859328920f36db9 50 Gene3D G3DSA:2.60.40.4150 2 50 2.5E-9 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_3686 350d79f27a2014a05920d905c07452ff 322 Pfam PF00589 Phage integrase family 148 301 5.4E-22 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_3686 350d79f27a2014a05920d905c07452ff 322 Pfam PF13102 Phage integrase SAM-like domain 20 96 3.5E-5 T 12-10-2018 IPR025269 Phage integrase SAM-like domain YpsIP31758_3686 350d79f27a2014a05920d905c07452ff 322 Gene3D G3DSA:1.10.443.10 105 320 1.9E-27 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_3686 350d79f27a2014a05920d905c07452ff 322 Gene3D G3DSA:1.10.150.130 3 104 7.4E-10 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_3686 350d79f27a2014a05920d905c07452ff 322 SUPERFAMILY SSF56349 8 309 7.06E-39 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00421 146 203 3.7E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF52172 3 131 2.99E-31 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 Gene3D G3DSA:3.40.50.12740 2 209 9.5E-57 T 12-10-2018 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00448 2 115 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF46894 136 210 3.4E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 5.1E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00072 Response regulator receiver domain 4 116 3.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_2253 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 SMART SM00345 17 75 5.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 SUPERFAMILY SSF46785 7 79 3.78E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 SUPERFAMILY SSF48008 81 217 1.86E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 SMART SM00895 85 209 7.4E-17 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 Gene3D G3DSA:1.10.10.10 10 76 7.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 Gene3D G3DSA:1.20.120.530 79 223 2.2E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 72 6.3E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_0383 995138dc650ea9ea8b64872112c4245c 224 Pfam PF07729 FCD domain 85 208 8.6E-24 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_2068 6349a456e6fd3f1d69caeef925051c77 207 Gene3D G3DSA:2.50.20.10 30 207 2.6E-60 T 12-10-2018 YpsIP31758_2068 6349a456e6fd3f1d69caeef925051c77 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.925 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YpsIP31758_2068 6349a456e6fd3f1d69caeef925051c77 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 4.3E-47 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YpsIP31758_2068 6349a456e6fd3f1d69caeef925051c77 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 205 7.9E-73 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YpsIP31758_2068 6349a456e6fd3f1d69caeef925051c77 207 SUPERFAMILY SSF89392 34 206 1.73E-55 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX YpsIP31758_2098 d7cea7c3e0567c17899d3669e5074c1e 572 SUPERFAMILY SSF48452 86 273 1.52E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0172 71fd694154d9114cdbd10d77c6a57fcd 263 Pfam PF05096 Glutamine cyclotransferase 27 259 2.0E-89 T 12-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 YpsIP31758_0172 71fd694154d9114cdbd10d77c6a57fcd 263 SUPERFAMILY SSF50969 27 255 1.29E-22 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YpsIP31758_0172 71fd694154d9114cdbd10d77c6a57fcd 263 Gene3D G3DSA:2.130.10.10 29 254 2.5E-8 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_0536 fc106bbad2dc449ccc99027908b55c23 108 Pfam PF17090 Uncharacterised protein family 43 106 4.8E-11 T 12-10-2018 IPR031381 Uncharacterised protein YtcA YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 SUPERFAMILY SSF53335 19 248 2.01E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 5.3E-87 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 8.7E-107 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.339 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YpsIP31758_0271 7d0b164c6b62192ffe7c11ed768f290a 251 Gene3D G3DSA:3.40.50.150 31 251 5.5E-76 T 12-10-2018 YpsIP31758_0592 435e4d8f94fc7cf0a0ebd4395866feb5 143 Gene3D G3DSA:3.30.420.270 63 132 1.9E-28 T 12-10-2018 YpsIP31758_0592 435e4d8f94fc7cf0a0ebd4395866feb5 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.3E-29 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 YpsIP31758_0592 435e4d8f94fc7cf0a0ebd4395866feb5 143 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 1.7E-64 T 12-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 YpsIP31758_3241 f1386bea64e120ec4620cc059f50b9bc 162 Gene3D G3DSA:3.90.950.20 1 161 3.0E-61 T 12-10-2018 IPR036653 CinA-like, C-terminal YpsIP31758_3241 f1386bea64e120ec4620cc059f50b9bc 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 1.5E-57 T 12-10-2018 IPR008136 CinA, C-terminal YpsIP31758_3241 f1386bea64e120ec4620cc059f50b9bc 162 Pfam PF02464 Competence-damaged protein 8 158 1.7E-58 T 12-10-2018 IPR008136 CinA, C-terminal YpsIP31758_3241 f1386bea64e120ec4620cc059f50b9bc 162 SUPERFAMILY SSF142433 6 159 2.09E-57 T 12-10-2018 IPR036653 CinA-like, C-terminal YpsIP31758_0950 469439bcbf2237ceb921cc39aaf00be4 225 Pfam PF00484 Carbonic anhydrase 72 221 1.5E-35 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_0950 469439bcbf2237ceb921cc39aaf00be4 225 SUPERFAMILY SSF53056 16 224 1.31E-53 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YpsIP31758_0950 469439bcbf2237ceb921cc39aaf00be4 225 SMART SM00947 65 225 7.5E-43 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_0950 469439bcbf2237ceb921cc39aaf00be4 225 Gene3D G3DSA:3.40.1050.10 21 225 3.0E-55 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Gene3D G3DSA:3.30.930.10 11 465 2.4E-241 T 12-10-2018 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Gene3D G3DSA:3.40.50.800 4 554 2.4E-241 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 SUPERFAMILY SSF55681 10 478 6.93E-107 T 12-10-2018 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 SUPERFAMILY SSF55826 218 390 9.03E-31 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Pfam PF03129 Anticodon binding domain 475 568 8.6E-21 T 12-10-2018 IPR004154 Anticodon-binding YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Gene3D G3DSA:3.90.960.10 240 389 2.4E-241 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 SUPERFAMILY SSF52954 462 571 5.74E-33 T 12-10-2018 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.879 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 PIRSF PIRSF001535 1 572 1.4E-275 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.3E-49 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 2.5E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 2.7E-272 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YpsIP31758_1038 708bb943b928b2d0661c082bbac24892 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YpsIP31758_B0013 77c5727140e47fe411b30e0d528fd618 388 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 299 381 6.4E-15 T 12-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 PIRSF PIRSF029745 3 562 3.6E-163 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 3.0E-25 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:3.10.20.310 71 153 1.2E-7 T 12-10-2018 YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:2.40.160.50 186 562 7.7E-103 T 12-10-2018 YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 213 526 2.6E-110 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_1518 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF17287 POTRA domain 154 208 6.2E-20 T 12-10-2018 IPR035251 ShlB, POTRA domain YpsIP31758_2243 288ca82e32568cf74e054c9b00f72caa 80 Pfam PF06440 DNA polymerase III, theta subunit 14 77 1.2E-8 T 12-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2243 288ca82e32568cf74e054c9b00f72caa 80 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 15 78 6.0E-4 T 12-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2243 288ca82e32568cf74e054c9b00f72caa 80 Gene3D G3DSA:1.20.58.250 12 79 9.6E-9 T 12-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2243 288ca82e32568cf74e054c9b00f72caa 80 SUPERFAMILY SSF46575 13 76 2.75E-20 T 12-10-2018 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:1.10.10.60 286 395 7.5E-29 T 12-10-2018 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 343 392 2.8E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF12833 Helix-turn-helix domain 314 389 2.0E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 289 337 2.02E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 SMART SM00342 306 389 6.3E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 8 274 4.2E-87 T 12-10-2018 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF13377 Periplasmic binding protein-like domain 113 282 1.3E-32 T 12-10-2018 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF53822 10 304 1.69E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 102 283 4.2E-87 T 12-10-2018 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 358 373 5.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 373 389 5.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_4098 cb51826e6fa41ca594d57d8e7ff1e841 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 385 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 Gene3D G3DSA:3.40.50.2300 145 273 9.0E-118 T 12-10-2018 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.3E-63 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 Pfam PF13458 Periplasmic binding protein 27 360 1.9E-63 T 12-10-2018 IPR028081 Leucine-binding protein domain YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 Gene3D G3DSA:3.40.50.2300 28 347 9.0E-118 T 12-10-2018 YpsIP31758_0244 e27bcbe245a3a49fa672cb62772bc68b 371 SUPERFAMILY SSF53822 26 368 1.28E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3534 afdc60484e7b824f9b3ef0f37459a31d 398 Pfam PF05987 Bacterial protein of unknown function (DUF898) 12 391 6.4E-101 T 12-10-2018 IPR010295 Protein of unknown function DUF898 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 SUPERFAMILY SSF53335 6 283 4.57E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 Gene3D G3DSA:2.30.140.10 1 54 1.2E-26 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 Pfam PF01564 Spermine/spermidine synthase domain 60 240 5.8E-67 T 12-10-2018 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 2.2E-18 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.406 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 Gene3D G3DSA:3.40.50.150 55 287 1.6E-80 T 12-10-2018 YpsIP31758_3354 db2ecdc8f70421ff1845d93a080a3b96 296 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.1E-116 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 YpsIP31758_1811 b656dcc0445635f51d95774152e4a74c 123 PIRSF PIRSF025560 1 123 1.2E-44 T 12-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 YpsIP31758_1811 b656dcc0445635f51d95774152e4a74c 123 Pfam PF07027 Protein of unknown function (DUF1318) 35 123 1.1E-29 T 12-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 YpsIP31758_0506 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 SUPERFAMILY SSF53300 4 161 6.82E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0506 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 SMART SM00327 3 182 3.4E-10 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0506 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 Gene3D G3DSA:3.40.50.410 4 175 6.2E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0506 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 Pfam PF00092 von Willebrand factor type A domain 6 161 3.3E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0506 e6ab6bd9395cdff4f2a9a5ccdcdc1a85 212 PIRSF PIRSF020634 1 211 3.6E-90 T 12-10-2018 IPR011392 Tellurite resistance, TerY YpsIP31758_1232 57574e446e1b019e922f4251088ee482 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 6.3E-22 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_1232 57574e446e1b019e922f4251088ee482 181 SUPERFAMILY SSF55729 3 164 6.67E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1232 57574e446e1b019e922f4251088ee482 181 Gene3D G3DSA:3.40.630.30 5 174 1.1E-50 T 12-10-2018 YpsIP31758_B0011 658015da0d75954c3e482aa7d3ed4a39 159 Gene3D G3DSA:1.10.530.10 16 159 1.1E-6 T 12-10-2018 YpsIP31758_B0011 658015da0d75954c3e482aa7d3ed4a39 159 Pfam PF01464 Transglycosylase SLT domain 21 122 2.1E-7 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_B0011 658015da0d75954c3e482aa7d3ed4a39 159 SUPERFAMILY SSF53955 21 133 3.13E-20 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 SUPERFAMILY SSF109709 120 229 1.7E-18 T 12-10-2018 YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 SMART SM00470 33 126 9.7E-19 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Gene3D G3DSA:3.90.1530.30 46 114 2.1E-15 T 12-10-2018 YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Pfam PF08535 KorB domain 146 231 8.7E-14 T 12-10-2018 IPR013741 Repressor KorB domain YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 SUPERFAMILY SSF50037 291 350 1.01E-19 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Pfam PF06613 KorB C-terminal beta-barrel domain 292 350 2.2E-20 T 12-10-2018 IPR010575 KorB, C-terminal GO:0003677|GO:0045892 YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Pfam PF02195 ParB-like nuclease domain 36 124 8.1E-16 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Gene3D G3DSA:1.10.10.730 118 173 7.9E-27 T 12-10-2018 YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 SUPERFAMILY SSF110849 34 128 1.34E-15 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 Gene3D G3DSA:2.30.30.150 289 350 8.1E-22 T 12-10-2018 IPR037048 KorB, C-terminal domain superfamily GO:0003677|GO:0045892 YpsIP31758_A0037 9bc376085a686f4f3a1c4d2314cbb054 350 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 207 4.8E-51 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 YpsIP31758_3035 7e6a1fcc893783cdb8f7ace4dcdde07d 434 SUPERFAMILY SSF53613 36 416 2.96E-45 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_3035 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Pfam PF00294 pfkB family carbohydrate kinase 138 297 6.2E-9 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 314 331 6.5E-14 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 6.5E-14 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 6.5E-14 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 6.5E-14 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 6.5E-14 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 Gene3D G3DSA:2.40.160.10 22 360 1.4E-137 T 12-10-2018 IPR023614 Porin domain superfamily YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 Pfam PF00267 Gram-negative porin 27 360 5.7E-130 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.5E-52 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 1.5E-52 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 1.5E-52 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 270 289 1.5E-52 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.5E-52 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 YpsIP31758_2115 e53a864c0071ed615503cb587279f13c 360 SUPERFAMILY SSF56935 22 360 1.6E-71 T 12-10-2018 YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 Gene3D G3DSA:3.40.50.300 1 224 3.8E-44 T 12-10-2018 YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 Gene3D G3DSA:3.40.50.300 310 553 2.7E-50 T 12-10-2018 YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 3.6E-19 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 PIRSF PIRSF003128 1 553 1.3E-156 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 SUPERFAMILY SSF52540 1 514 1.86E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2889 bf0a665ff6f111a749cdd1a496c56400 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 9.8E-167 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 2.0E-228 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PIRSF PIRSF039101 1 505 1.1E-198 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:2.40.50.140 15 154 5.6E-42 T 12-10-2018 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.105 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 6.8E-83 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 2.5E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF50249 13 155 1.52E-45 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:3.30.930.10 155 499 4.7E-135 T 12-10-2018 YpsIP31758_0883 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF55681 162 502 3.06E-123 T 12-10-2018 YpsIP31758_0656 62503a817405453d22406265e941cabe 127 TIGRFAM TIGR00208 fliS: flagellar protein FliS 10 123 6.5E-22 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_0656 62503a817405453d22406265e941cabe 127 PIRSF PIRSF039090 1 127 2.9E-35 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_0656 62503a817405453d22406265e941cabe 127 Gene3D G3DSA:1.20.120.340 2 127 1.2E-30 T 12-10-2018 YpsIP31758_0656 62503a817405453d22406265e941cabe 127 SUPERFAMILY SSF101116 11 125 5.49E-32 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 YpsIP31758_0656 62503a817405453d22406265e941cabe 127 Pfam PF02561 Flagellar protein FliS 11 124 4.2E-29 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 YpsIP31758_1758 946e7670d043a1772f20ab79633cbb56 116 Gene3D G3DSA:3.40.30.10 1 107 2.5E-33 T 12-10-2018 YpsIP31758_1758 946e7670d043a1772f20ab79633cbb56 116 SUPERFAMILY SSF52833 2 101 1.15E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1758 946e7670d043a1772f20ab79633cbb56 116 PIRSF PIRSF005894 1 107 5.8E-52 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 YpsIP31758_1758 946e7670d043a1772f20ab79633cbb56 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.8E-47 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related YpsIP31758_1758 946e7670d043a1772f20ab79633cbb56 116 Pfam PF00462 Glutaredoxin 16 80 9.3E-19 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:1.10.10.10 1 63 2.7E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 SMART SM00344 12 121 6.2E-54 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.7E-25 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF46785 12 70 5.69E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.7E-21 T 12-10-2018 YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF54909 74 157 9.52E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_2597 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:3.30.70.920 64 159 1.7E-24 T 12-10-2018 YpsIP31758_0111 a2b0442442fd0e5035e0d965b6ab86be 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.099 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 YpsIP31758_0111 a2b0442442fd0e5035e0d965b6ab86be 305 PIRSF PIRSF005355 2 305 5.7E-87 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 YpsIP31758_0111 a2b0442442fd0e5035e0d965b6ab86be 305 Pfam PF01040 UbiA prenyltransferase family 29 276 1.5E-36 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 YpsIP31758_0111 a2b0442442fd0e5035e0d965b6ab86be 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 8.7E-128 T 12-10-2018 YpsIP31758_2309 9bbc8b7648f5032f70d159d498b438b2 331 Pfam PF13407 Periplasmic binding protein domain 29 284 4.3E-45 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_2309 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 131 265 8.6E-95 T 12-10-2018 YpsIP31758_2309 9bbc8b7648f5032f70d159d498b438b2 331 SUPERFAMILY SSF53822 26 331 3.3E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2309 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 28 304 8.6E-95 T 12-10-2018 YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 1.7E-13 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 Pfam PF01467 Cytidylyltransferase-like 13 193 2.4E-34 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 Gene3D G3DSA:3.40.50.620 8 219 1.1E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.591 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 SUPERFAMILY SSF52374 11 219 2.39E-58 T 12-10-2018 YpsIP31758_2929 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 1.8E-58 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 8.1E-64 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.5E-171 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 Gene3D G3DSA:3.90.226.10 4 319 4.6E-123 T 12-10-2018 YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 SUPERFAMILY SSF52096 5 318 4.98E-105 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_1029 fb10a07c09c06985ba1994be1ca44e6a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.026 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YpsIP31758_0507 256f536e59d5ec09e81c7ed34c7c6fff 213 Gene3D G3DSA:2.60.60.30 19 204 3.5E-53 T 12-10-2018 YpsIP31758_0507 256f536e59d5ec09e81c7ed34c7c6fff 213 Pfam PF02342 TerD domain 1 203 2.8E-53 T 12-10-2018 IPR003325 TerD domain YpsIP31758_4048 de6a60228fd47608670eddb5cc047074 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.75 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YpsIP31758_4048 de6a60228fd47608670eddb5cc047074 280 SUPERFAMILY SSF53335 9 279 4.0E-100 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_4048 de6a60228fd47608670eddb5cc047074 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_4048 de6a60228fd47608670eddb5cc047074 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.2E-111 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YpsIP31758_4048 de6a60228fd47608670eddb5cc047074 280 Gene3D G3DSA:3.40.50.150 1 280 3.0E-120 T 12-10-2018 YpsIP31758_3267 9c59ad8f31bbd50692cbc0f2a8a995f9 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 3.8E-37 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2238 44961ac2dfc65ee391939540726b178e 117 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 12 105 5.2E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YpsIP31758_2238 44961ac2dfc65ee391939540726b178e 117 Gene3D G3DSA:3.30.2310.20 4 110 5.6E-6 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Gene3D G3DSA:3.40.50.970 351 553 4.7E-62 T 12-10-2018 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 3.4E-40 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Gene3D G3DSA:3.40.50.970 1 176 4.3E-68 T 12-10-2018 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 SUPERFAMILY SSF52467 186 350 6.73E-54 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 553 4.8E-196 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 SUPERFAMILY SSF52518 1 177 5.89E-60 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Gene3D G3DSA:3.40.50.1220 186 349 1.8E-52 T 12-10-2018 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 SUPERFAMILY SSF52518 357 552 2.08E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 3.3E-59 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YpsIP31758_1839 a06dfe1a514ca2e062f17db1663561c5 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 530 5.3E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YpsIP31758_3927 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.847 T 12-10-2018 IPR007236 SlyX YpsIP31758_3927 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Pfam PF04102 SlyX 6 72 5.6E-24 T 12-10-2018 IPR007236 SlyX YpsIP31758_1659 663f1ef6d044793a039eac39b1f3afb2 129 PIRSF PIRSF021320 1 129 3.4E-41 T 12-10-2018 IPR009326 Protein of unknown function DUF984 YpsIP31758_1659 663f1ef6d044793a039eac39b1f3afb2 129 SMART SM01022 14 127 7.9E-38 T 12-10-2018 IPR007374 ASCH domain YpsIP31758_1659 663f1ef6d044793a039eac39b1f3afb2 129 SUPERFAMILY SSF88697 3 127 2.73E-43 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_1659 663f1ef6d044793a039eac39b1f3afb2 129 Pfam PF04266 ASCH domain 23 126 3.6E-22 T 12-10-2018 IPR007374 ASCH domain YpsIP31758_1659 663f1ef6d044793a039eac39b1f3afb2 129 Gene3D G3DSA:3.10.400.10 1 129 3.7E-42 T 12-10-2018 YpsIP31758_3984 06dc8a80f190855b1b1a7a7d03d50f2a 75 Pfam PF04023 FeoA domain 8 63 3.3E-6 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YpsIP31758_3984 06dc8a80f190855b1b1a7a7d03d50f2a 75 SMART SM00899 1 72 4.1E-7 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YpsIP31758_3984 06dc8a80f190855b1b1a7a7d03d50f2a 75 Gene3D G3DSA:2.30.30.90 1 75 7.1E-28 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain YpsIP31758_3984 06dc8a80f190855b1b1a7a7d03d50f2a 75 SUPERFAMILY SSF50037 6 70 3.36E-14 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 297 1.6E-9 T 12-10-2018 IPR010918 PurM-like, C-terminal domain YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 Gene3D G3DSA:3.30.1330.10 2 144 9.6E-46 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 29.227 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.6E-116 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 SUPERFAMILY SSF55326 4 138 1.59E-34 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 SUPERFAMILY SSF56042 143 303 6.43E-39 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 PIRSF PIRSF005303 1 322 3.6E-91 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 Gene3D G3DSA:3.90.650.10 145 323 6.4E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YpsIP31758_3114 8826ca7afb95945feb3af1db2707adef 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.2E-22 T 12-10-2018 IPR016188 PurM-like, N-terminal domain YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 Gene3D G3DSA:3.40.50.1000 4 188 1.5E-65 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 6.4E-40 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 SUPERFAMILY SSF56784 3 184 4.61E-53 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 2.2E-93 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 Pfam PF13242 HAD-hyrolase-like 109 179 3.4E-12 T 12-10-2018 YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 153 2.9E-37 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 YpsIP31758_1044 584ab34b47768699a051cd067dcedfb9 188 PIRSF PIRSF004682 1 188 4.9E-67 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 Gene3D G3DSA:3.40.50.300 4 221 1.1E-64 T 12-10-2018 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 Gene3D G3DSA:2.40.50.140 286 343 3.0E-26 T 12-10-2018 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 SUPERFAMILY SSF52540 4 241 6.16E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 Pfam PF00005 ABC transporter 20 161 8.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 SMART SM00382 28 210 4.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 Gene3D G3DSA:2.40.50.940 222 352 3.0E-26 T 12-10-2018 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 Pfam PF08402 TOBE domain 280 351 9.0E-9 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_3572 f1210e8b0f4e292a8ca007084855e554 364 SUPERFAMILY SSF50331 236 359 4.62E-22 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0570 bd87ce7bc8f06d5d914f528e3363c602 260 PIRSF PIRSF006157 1 260 3.9E-92 T 12-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 YpsIP31758_0570 bd87ce7bc8f06d5d914f528e3363c602 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 6.1E-33 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YpsIP31758_0570 bd87ce7bc8f06d5d914f528e3363c602 260 Gene3D G3DSA:3.40.830.10 1 260 6.9E-94 T 12-10-2018 YpsIP31758_0570 bd87ce7bc8f06d5d914f528e3363c602 260 SUPERFAMILY SSF53213 5 260 4.97E-92 T 12-10-2018 YpsIP31758_2441 8c245a4c372394bffe6cde83f520d993 359 Gene3D G3DSA:3.40.50.1980 190 351 2.7E-38 T 12-10-2018 YpsIP31758_2441 8c245a4c372394bffe6cde83f520d993 359 SUPERFAMILY SSF53807 61 342 5.1E-47 T 12-10-2018 YpsIP31758_2441 8c245a4c372394bffe6cde83f520d993 359 Gene3D G3DSA:3.40.50.1980 50 188 7.1E-37 T 12-10-2018 YpsIP31758_2441 8c245a4c372394bffe6cde83f520d993 359 Pfam PF01497 Periplasmic binding protein 72 311 3.1E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 Gene3D G3DSA:1.10.287.70 132 228 3.1E-13 T 12-10-2018 YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 Pfam PF07885 Ion channel 141 218 7.0E-11 T 12-10-2018 IPR013099 Potassium channel domain YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 SUPERFAMILY SSF51735 239 376 7.56E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 SUPERFAMILY SSF81324 114 262 8.24E-21 T 12-10-2018 YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 Pfam PF02254 TrkA-N domain 243 356 2.8E-15 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YpsIP31758_1087 4547e5aefec59c01acd344f6eda4f0a9 391 Gene3D G3DSA:3.40.50.720 238 385 1.8E-26 T 12-10-2018 YpsIP31758_2151 27f2211708b9bfce74ecf2f496fcb4d2 289 Gene3D G3DSA:3.20.20.140 15 289 2.1E-83 T 12-10-2018 YpsIP31758_2151 27f2211708b9bfce74ecf2f496fcb4d2 289 Pfam PF04909 Amidohydrolase 27 289 3.9E-48 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_2151 27f2211708b9bfce74ecf2f496fcb4d2 289 SUPERFAMILY SSF51556 22 289 8.51E-79 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.40.10 54 355 7.3E-154 T 12-10-2018 IPR036908 RlpA-like domain superfamily YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 SMART SM00925 125 259 7.8E-75 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 PIRSF PIRSF019422 1 367 1.0E-87 T 12-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF06725 3D domain 279 356 4.8E-25 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.240.50 125 264 7.3E-154 T 12-10-2018 YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 SUPERFAMILY SSF50685 25 355 7.32E-111 T 12-10-2018 IPR036908 RlpA-like domain superfamily YpsIP31758_0995 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF03562 MltA specific insert domain 102 259 3.4E-42 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 YpsIP31758_0858 066f8c61ca88b7c6ee170bc042f943bd 109 Gene3D G3DSA:1.10.20.30 1 47 7.0E-25 T 12-10-2018 YpsIP31758_0858 066f8c61ca88b7c6ee170bc042f943bd 109 Gene3D G3DSA:1.20.5.50 49 100 4.6E-6 T 12-10-2018 YpsIP31758_0858 066f8c61ca88b7c6ee170bc042f943bd 109 SUPERFAMILY SSF102829 6 94 1.96E-23 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily YpsIP31758_0858 066f8c61ca88b7c6ee170bc042f943bd 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 32.76 T 12-10-2018 IPR023771 Cell division protein ZapA, eubacteria YpsIP31758_0858 066f8c61ca88b7c6ee170bc042f943bd 109 Pfam PF05164 Cell division protein ZapA 6 90 2.1E-17 T 12-10-2018 IPR007838 Cell division protein ZapA-like YpsIP31758_0273 a3d6826e5d0a2a10827181b175a7d273 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.0E-178 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 YpsIP31758_0273 a3d6826e5d0a2a10827181b175a7d273 543 SUPERFAMILY SSF56112 94 435 1.59E-45 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_0273 a3d6826e5d0a2a10827181b175a7d273 543 Pfam PF03109 ABC1 family 113 231 4.4E-34 T 12-10-2018 IPR004147 UbiB domain YpsIP31758_0273 a3d6826e5d0a2a10827181b175a7d273 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.256 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 YpsIP31758_0896 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 SUPERFAMILY SSF140931 87 270 1.31E-31 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_0896 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Pfam PF02661 Fic/DOC family 110 210 5.9E-19 T 12-10-2018 IPR003812 Fido domain YpsIP31758_0896 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Gene3D G3DSA:1.10.3290.10 28 277 5.4E-51 T 12-10-2018 IPR036597 Fido-like domain superfamily YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 Pfam PF00591 Glycosyl transferase family, a/b domain 94 316 1.2E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 Gene3D G3DSA:3.40.1030.10 73 319 1.4E-91 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 SUPERFAMILY SSF47648 7 70 1.31E-13 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 2.8E-9 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 Gene3D G3DSA:1.20.970.10 1 72 2.5E-30 T 12-10-2018 YpsIP31758_1487 9ea41d7ed700374ca344c7f6b7b69d04 319 SUPERFAMILY SSF52418 79 316 4.71E-45 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.10.10.10 1 75 5.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00895 99 227 3.3E-19 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF46785 5 76 2.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF48008 95 235 1.12E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.20.120.530 97 236 2.3E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.7E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF07729 FCD domain 99 226 8.6E-19 T 12-10-2018 IPR011711 GntR, C-terminal YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00345 15 74 1.6E-26 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_3364 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YpsIP31758_1817 b3c2a8a961abc48fa6c59a3bad968f1f 107 SUPERFAMILY SSF47413 29 102 2.28E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1817 b3c2a8a961abc48fa6c59a3bad968f1f 107 Gene3D G3DSA:1.10.260.40 21 99 5.3E-16 T 12-10-2018 YpsIP31758_1817 b3c2a8a961abc48fa6c59a3bad968f1f 107 Pfam PF01381 Helix-turn-helix 42 93 6.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_1817 b3c2a8a961abc48fa6c59a3bad968f1f 107 SMART SM00530 41 96 2.9E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 Pfam PF01311 Bacterial export proteins, family 1 13 245 7.9E-56 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.9E-15 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.9E-15 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.9E-15 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.9E-15 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YpsIP31758_0624 2fcb4cd3ec3e107ec1e6bfe0e818593f 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 253 3.9E-50 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 YpsIP31758_1602 340ba634c2a63b6233ac2f6d25fabd66 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.2E-212 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 YpsIP31758_1602 340ba634c2a63b6233ac2f6d25fabd66 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 8.3E-159 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YpsIP31758_1602 340ba634c2a63b6233ac2f6d25fabd66 415 Pfam PF02687 FtsX-like permease family 302 408 1.8E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_1602 340ba634c2a63b6233ac2f6d25fabd66 415 Pfam PF12704 MacB-like periplasmic core domain 28 239 3.2E-15 T 12-10-2018 IPR025857 MacB-like periplasmic core domain YpsIP31758_1402 45b1acf77242252f7550385ff982fe84 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 1.9E-49 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 YpsIP31758_1402 45b1acf77242252f7550385ff982fe84 163 Gene3D G3DSA:3.40.50.1240 1 161 1.6E-40 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_1402 45b1acf77242252f7550385ff982fe84 163 SMART SM00855 2 115 0.0064 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_1402 45b1acf77242252f7550385ff982fe84 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 72 2.1E-8 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_1402 45b1acf77242252f7550385ff982fe84 163 SUPERFAMILY SSF53254 1 141 1.05E-18 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_0523 f6aa8b66da1415c2dc7c72ea452c8e46 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 117 266 3.8E-6 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative YpsIP31758_A0058 13deffed059542ef6b6f603502bf751c 159 SUPERFAMILY SSF82679 1 102 8.63E-24 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_A0058 13deffed059542ef6b6f603502bf751c 159 Pfam PF02357 Transcription termination factor nusG 2 97 2.5E-16 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_A0058 13deffed059542ef6b6f603502bf751c 159 SMART SM00738 1 102 4.8E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_A0058 13deffed059542ef6b6f603502bf751c 159 Gene3D G3DSA:3.30.70.940 1 144 7.6E-32 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YpsIP31758_0617 0657332377066f49ee7b237659b82455 359 SUPERFAMILY SSF53807 52 333 9.03E-44 T 12-10-2018 YpsIP31758_0617 0657332377066f49ee7b237659b82455 359 Pfam PF01497 Periplasmic binding protein 75 321 5.7E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_0617 0657332377066f49ee7b237659b82455 359 Gene3D G3DSA:3.40.50.1980 172 352 8.2E-62 T 12-10-2018 YpsIP31758_0617 0657332377066f49ee7b237659b82455 359 Gene3D G3DSA:3.40.50.1980 54 171 5.6E-28 T 12-10-2018 YpsIP31758_2362 8ee323a14de53a14359114e8a709b81e 285 Gene3D G3DSA:3.40.830.10 1 284 4.7E-81 T 12-10-2018 YpsIP31758_2362 8ee323a14de53a14359114e8a709b81e 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.1E-155 T 12-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 YpsIP31758_2362 8ee323a14de53a14359114e8a709b81e 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 2.8E-80 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YpsIP31758_2362 8ee323a14de53a14359114e8a709b81e 285 SUPERFAMILY SSF53213 12 279 4.05E-46 T 12-10-2018 YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 SMART SM00490 259 340 2.3E-32 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 Pfam PF00271 Helicase conserved C-terminal domain 235 339 3.7E-26 T 12-10-2018 IPR001650 Helicase, C-terminal YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 SMART SM00487 20 223 4.7E-58 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 51.088 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 Gene3D G3DSA:3.40.50.300 215 394 2.6E-49 T 12-10-2018 YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 SUPERFAMILY SSF52540 75 361 2.96E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 Gene3D G3DSA:3.40.50.300 1 211 1.9E-76 T 12-10-2018 YpsIP31758_2810 28231969e49d95f5a02fc1391fb64d98 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 4.7E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YpsIP31758_0557 51df37adbe29dac42b76cedd65403cda 216 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.771 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YpsIP31758_0557 51df37adbe29dac42b76cedd65403cda 216 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.7E-51 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YpsIP31758_0557 51df37adbe29dac42b76cedd65403cda 216 SMART SM01207 10 185 2.0E-85 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YpsIP31758_0557 51df37adbe29dac42b76cedd65403cda 216 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 7.1E-81 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YpsIP31758_4021 c9167206a675ec71db8f9149f3fa901b 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 4.6E-196 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_4021 c9167206a675ec71db8f9149f3fa901b 438 PIRSF PIRSF002746 1 438 5.2E-159 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_4021 c9167206a675ec71db8f9149f3fa901b 438 Pfam PF02447 GntP family permease 1 437 2.5E-182 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_3515 d35e0b9c79b5df55e9d275d216e27c5d 410 Pfam PF04932 O-Antigen ligase 194 338 2.7E-16 T 12-10-2018 IPR007016 O-antigen ligase-related YpsIP31758_3312 814b77f9d970ab1e33127f401288e5ec 121 PIRSF PIRSF006113 2 121 5.4E-54 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 YpsIP31758_3312 814b77f9d970ab1e33127f401288e5ec 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 8 120 1.2E-34 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 YpsIP31758_3312 814b77f9d970ab1e33127f401288e5ec 121 SUPERFAMILY SSF55620 2 121 7.23E-41 T 12-10-2018 YpsIP31758_3312 814b77f9d970ab1e33127f401288e5ec 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 7 98 1.3E-33 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 YpsIP31758_3312 814b77f9d970ab1e33127f401288e5ec 121 Gene3D G3DSA:3.30.479.10 2 121 4.4E-50 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 YpsIP31758_0551 35f33954a32b4fe6af20c8fa1e6e2b5b 157 SUPERFAMILY SSF160631 45 147 7.85E-7 T 12-10-2018 YpsIP31758_0486 8078c1d02b04e6d977fecf7ff6849af5 129 Pfam PF13721 SecD export protein N-terminal TM region 11 106 4.3E-20 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain YpsIP31758_0486 8078c1d02b04e6d977fecf7ff6849af5 129 Gene3D G3DSA:3.30.70.260 33 113 5.1E-33 T 12-10-2018 YpsIP31758_0486 8078c1d02b04e6d977fecf7ff6849af5 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 25.263 T 12-10-2018 IPR026574 Modulator protein MzrA YpsIP31758_0183 7f03e03d0105b803b1d97a39314559c3 359 SUPERFAMILY SSF160355 62 327 6.28E-83 T 12-10-2018 YpsIP31758_0183 7f03e03d0105b803b1d97a39314559c3 359 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 16 356 56.842 T 12-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 YpsIP31758_0183 7f03e03d0105b803b1d97a39314559c3 359 Pfam PF02706 Chain length determinant protein 23 79 1.6E-13 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 Gene3D G3DSA:3.40.640.10 57 284 7.4E-133 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 Pfam PF00155 Aminotransferase class I and II 40 378 1.3E-60 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 4.6E-140 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 Gene3D G3DSA:3.90.1150.10 40 376 7.4E-133 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 SUPERFAMILY SSF53383 3 378 9.82E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2843 c7a92ba4c3f4707212936ba7c9b43323 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.999 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 SUPERFAMILY SSF51569 3 283 2.05E-101 T 12-10-2018 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 PIRSF PIRSF001359 1 284 4.6E-109 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 3.6E-100 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.5E-101 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.9E-165 T 12-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0929 4178ea8b48f9d3c8d1296452e5ecc11c 284 Gene3D G3DSA:3.20.20.70 2 284 1.4E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1250 a536e02287fc923fc30d1b27bbfa1c75 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 3.5E-134 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YpsIP31758_4089 540025bc7d27be19070c427e6b506077 309 Pfam PF00892 EamA-like transporter family 162 293 2.9E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_3170 da14512ba6efc01adf70c8e7b9361a64 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.677 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 YpsIP31758_3170 da14512ba6efc01adf70c8e7b9361a64 193 SUPERFAMILY SSF53697 1 189 2.43E-52 T 12-10-2018 YpsIP31758_3170 da14512ba6efc01adf70c8e7b9361a64 193 Pfam PF13580 SIS domain 14 146 9.4E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_3170 da14512ba6efc01adf70c8e7b9361a64 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.9E-84 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 YpsIP31758_3170 da14512ba6efc01adf70c8e7b9361a64 193 Gene3D G3DSA:3.40.50.10490 1 192 2.5E-72 T 12-10-2018 YpsIP31758_0778 4934c6e8561a6824004ffcbaef88888a 517 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 51 513 9.9E-205 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_0778 4934c6e8561a6824004ffcbaef88888a 517 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 94 513 8.0E-171 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 SUPERFAMILY SSF102114 24 117 9.42E-7 T 12-10-2018 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.3E-112 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PIRSF PIRSF000370 1 223 7.2E-71 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Gene3D G3DSA:3.20.20.70 2 223 3.6E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.581 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF04055 Radical SAM superfamily 26 124 8.0E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_3313 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 8.3E-13 T 12-10-2018 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 SUPERFAMILY SSF63380 1 93 1.96E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 9.4E-84 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 SUPERFAMILY SSF63380 93 199 3.83E-32 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 Gene3D G3DSA:2.40.30.20 1 89 5.9E-33 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 Gene3D G3DSA:2.40.30.20 94 191 1.2E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 PIRSF PIRSF000498 1 212 3.2E-75 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 Pfam PF00677 Lumazine binding domain 3 87 4.0E-22 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_1751 6f7c32253c62d4af607f5b62e3faf126 218 Pfam PF00677 Lumazine binding domain 100 185 2.1E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YpsIP31758_0444 eb3921912448b136df7ba9437fd2df94 187 Gene3D G3DSA:2.60.450.10 60 187 1.7E-48 T 12-10-2018 YpsIP31758_0444 eb3921912448b136df7ba9437fd2df94 187 PIRSF PIRSF028513 1 187 5.4E-42 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YpsIP31758_0444 eb3921912448b136df7ba9437fd2df94 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 3.1E-55 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YpsIP31758_0444 eb3921912448b136df7ba9437fd2df94 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.553 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YpsIP31758_0444 eb3921912448b136df7ba9437fd2df94 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 1.6E-53 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.487 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 SUPERFAMILY SSF52540 4 170 2.7E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 Pfam PF01202 Shikimate kinase 13 170 8.9E-57 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 12-10-2018 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 12-10-2018 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 12-10-2018 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 12-10-2018 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 12-10-2018 YpsIP31758_3966 72be2aa6396ad0abaa3a71920db8eba5 173 Gene3D G3DSA:3.40.50.300 1 173 1.2E-58 T 12-10-2018 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 Pfam PF00293 NUDIX domain 5 134 4.9E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 Gene3D G3DSA:3.90.79.10 1 147 3.5E-43 T 12-10-2018 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 SUPERFAMILY SSF55811 2 144 4.2E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 5.8E-47 T 12-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 5.8E-47 T 12-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 5.8E-47 T 12-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 5.8E-47 T 12-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YpsIP31758_2034 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 5.8E-47 T 12-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YpsIP31758_1989 f1225eb40b59d9808c80444d354fec1e 291 Pfam PF01263 Aldose 1-epimerase 28 275 1.2E-44 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YpsIP31758_1989 f1225eb40b59d9808c80444d354fec1e 291 SUPERFAMILY SSF74650 8 285 4.65E-71 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_1989 f1225eb40b59d9808c80444d354fec1e 291 PIRSF PIRSF016020 8 291 4.3E-55 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 YpsIP31758_1989 f1225eb40b59d9808c80444d354fec1e 291 Gene3D G3DSA:2.70.98.10 1 289 7.9E-94 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 3.1E-50 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.166 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PIRSF PIRSF000114 1 336 2.9E-100 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.8E-41 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:3.40.50.720 2 191 4.3E-55 T 12-10-2018 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 7.1E-53 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF48179 184 335 2.44E-58 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:1.10.1040.10 193 338 4.2E-53 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_0079 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF51735 8 182 3.7E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2320 b72933f93900dd8d5044d8c3fb2d0710 251 SUPERFAMILY SSF117143 77 209 7.72E-19 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_2320 b72933f93900dd8d5044d8c3fb2d0710 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 6.9E-34 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_2320 b72933f93900dd8d5044d8c3fb2d0710 251 Pfam PF00460 Flagella basal body rod protein 5 35 5.1E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2320 b72933f93900dd8d5044d8c3fb2d0710 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 247 6.2E-22 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_3570 6958dfdc7737a382d8aeafe8568ae4b0 147 PIRSF PIRSF009554 3 147 2.6E-64 T 12-10-2018 IPR011194 Uncharacterised protein family UPF0306 YpsIP31758_3570 6958dfdc7737a382d8aeafe8568ae4b0 147 Gene3D G3DSA:2.30.110.10 2 142 2.5E-10 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 YpsIP31758_3570 6958dfdc7737a382d8aeafe8568ae4b0 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 37.016 T 12-10-2018 IPR011194 Uncharacterised protein family UPF0306 YpsIP31758_3570 6958dfdc7737a382d8aeafe8568ae4b0 147 SUPERFAMILY SSF50475 10 142 1.43E-12 T 12-10-2018 YpsIP31758_1828 c6dc960b8606619e2a74ada8d5abbf34 463 Pfam PF13520 Amino acid permease 5 417 4.0E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1828 c6dc960b8606619e2a74ada8d5abbf34 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 4.1E-169 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YpsIP31758_1828 c6dc960b8606619e2a74ada8d5abbf34 463 Gene3D G3DSA:1.20.1740.10 1 446 4.4E-56 T 12-10-2018 YpsIP31758_1828 c6dc960b8606619e2a74ada8d5abbf34 463 PIRSF PIRSF006060 1 461 3.7E-48 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 2.8E-96 T 12-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 Gene3D G3DSA:2.60.120.10 15 123 6.3E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 PIRSF PIRSF036628 1 269 2.7E-112 T 12-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 SUPERFAMILY SSF51182 4 253 1.29E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 Pfam PF04962 KduI/IolB family 7 264 2.0E-109 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 YpsIP31758_2967 f502a891696354d10a3d191ab0ede689 271 Gene3D G3DSA:2.60.120.10 124 270 2.5E-58 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_3555 2fd1d5080fe37fe528f777843d914ec8 238 Gene3D G3DSA:3.40.50.300 1 237 7.5E-73 T 12-10-2018 YpsIP31758_3555 2fd1d5080fe37fe528f777843d914ec8 238 Pfam PF00005 ABC transporter 24 171 4.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3555 2fd1d5080fe37fe528f777843d914ec8 238 SMART SM00382 32 220 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3555 2fd1d5080fe37fe528f777843d914ec8 238 SUPERFAMILY SSF52540 3 232 2.66E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3555 2fd1d5080fe37fe528f777843d914ec8 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2607 133e1570fd1e3e05e6402820997ef677 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 8.9E-34 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 YpsIP31758_2607 133e1570fd1e3e05e6402820997ef677 106 Gene3D G3DSA:3.30.1390.10 1 106 3.8E-47 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YpsIP31758_2607 133e1570fd1e3e05e6402820997ef677 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 21 101 28.223 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YpsIP31758_2607 133e1570fd1e3e05e6402820997ef677 106 SUPERFAMILY SSF54736 21 105 5.23E-33 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YpsIP31758_3724 877be5ab6d0f7fdecea37a46ec9ce663 118 SMART SM00530 5 64 7.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3724 877be5ab6d0f7fdecea37a46ec9ce663 118 Gene3D G3DSA:1.10.260.40 2 115 1.2E-17 T 12-10-2018 YpsIP31758_3724 877be5ab6d0f7fdecea37a46ec9ce663 118 SUPERFAMILY SSF47413 3 69 1.3E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3724 877be5ab6d0f7fdecea37a46ec9ce663 118 Pfam PF12844 Helix-turn-helix domain 4 64 3.5E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.379 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Gene3D G3DSA:3.40.50.720 2 93 6.8E-26 T 12-10-2018 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 355 9.5E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 SUPERFAMILY SSF53623 95 297 1.23E-56 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 SUPERFAMILY SSF53244 299 437 3.25E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 2.4E-123 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Pfam PF08245 Mur ligase middle domain 110 280 1.0E-26 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Gene3D G3DSA:3.40.1190.10 94 299 9.2E-80 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 SUPERFAMILY SSF51984 3 94 8.24E-25 T 12-10-2018 YpsIP31758_3389 5ffb0c1ed962a10544a8c95ef3de5fbe 438 Gene3D G3DSA:3.90.190.20 300 434 8.1E-44 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YpsIP31758_2457 940aec771d027b7467a391179559f1af 358 Pfam PF13407 Periplasmic binding protein domain 55 301 5.5E-26 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_2457 940aec771d027b7467a391179559f1af 358 Gene3D G3DSA:3.40.50.2300 144 312 8.5E-67 T 12-10-2018 YpsIP31758_2457 940aec771d027b7467a391179559f1af 358 Gene3D G3DSA:3.40.50.2300 43 309 8.5E-67 T 12-10-2018 YpsIP31758_2457 940aec771d027b7467a391179559f1af 358 SUPERFAMILY SSF53822 40 305 1.04E-38 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 71.275 T 12-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 4.5E-128 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.40.640.10 1 252 1.7E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.90.1150.10 253 382 2.6E-37 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 PIRSF PIRSF000390 1 381 2.5E-111 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_1723 7e77339e8dfe124ab28bc3dc3556627e 384 SUPERFAMILY SSF53383 4 376 1.8E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2622 3dd796abd83915c96a96afde6db6ec4f 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 2.3E-29 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_2622 3dd796abd83915c96a96afde6db6ec4f 335 Gene3D G3DSA:3.40.50.720 1 334 5.9E-58 T 12-10-2018 YpsIP31758_2622 3dd796abd83915c96a96afde6db6ec4f 335 SUPERFAMILY SSF51735 1 332 2.77E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 Gene3D G3DSA:3.40.1500.10 1 302 5.4E-134 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.424 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PIRSF PIRSF000166 2 303 3.7E-127 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 SUPERFAMILY SSF102886 5 302 1.57E-138 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 262 288 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 48 69 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 90 114 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 162 191 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 31 47 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 125 147 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 PRINTS PR00073 Coprogen oxidase signature 234 261 8.7E-86 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1280 3a85daac0d5c88b79ee8468f8803853b 309 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 7.5E-131 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 YpsIP31758_1403 d59b642150930aceec0c161a0cf55674 176 SMART SM00463 95 173 5.1E-18 T 12-10-2018 IPR002625 Smr domain YpsIP31758_1403 d59b642150930aceec0c161a0cf55674 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.916 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 YpsIP31758_1403 d59b642150930aceec0c161a0cf55674 176 Gene3D G3DSA:3.30.1370.110 50 176 8.5E-29 T 12-10-2018 YpsIP31758_1403 d59b642150930aceec0c161a0cf55674 176 SUPERFAMILY SSF160443 95 150 1.16E-9 T 12-10-2018 IPR036063 Smr domain superfamily YpsIP31758_1403 d59b642150930aceec0c161a0cf55674 176 Pfam PF01713 Smr domain 98 170 1.2E-17 T 12-10-2018 IPR002625 Smr domain YpsIP31758_0477 8ffcc3df053453b491999e4ef3d14c9e 234 SUPERFAMILY SSF51182 1 232 2.67E-46 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_0477 8ffcc3df053453b491999e4ef3d14c9e 234 Gene3D G3DSA:2.60.120.10 12 133 4.0E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_0477 8ffcc3df053453b491999e4ef3d14c9e 234 Pfam PF02678 Pirin 5 119 1.1E-21 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 YpsIP31758_0477 8ffcc3df053453b491999e4ef3d14c9e 234 PIRSF PIRSF006232 1 231 1.8E-32 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 YpsIP31758_0477 8ffcc3df053453b491999e4ef3d14c9e 234 Gene3D G3DSA:2.60.120.10 134 234 2.8E-33 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_0359 cf6f1d331209f4789ab1b27376493a8c 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.5E-206 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 YpsIP31758_0359 cf6f1d331209f4789ab1b27376493a8c 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 1.2E-79 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YpsIP31758_1390 a06f4b016c9a2f956a7f3ba9c3d2ac78 120 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 1.0E-20 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YpsIP31758_1390 a06f4b016c9a2f956a7f3ba9c3d2ac78 120 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 6.9E-19 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YpsIP31758_1390 a06f4b016c9a2f956a7f3ba9c3d2ac78 120 Gene3D G3DSA:2.160.20.80 42 119 1.4E-5 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 70 456 2.4E-121 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 Pfam PF00263 Bacterial type II and III secretion system protein 297 456 2.5E-46 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 Gene3D G3DSA:3.55.50.30 45 165 1.8E-25 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR01032 Gene IV protein signature 384 412 1.3E-10 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR01032 Gene IV protein signature 318 341 1.3E-10 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR01032 Gene IV protein signature 277 300 1.3E-10 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR01032 Gene IV protein signature 437 458 1.3E-10 T 12-10-2018 YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 Gene3D G3DSA:3.30.1370.120 166 226 7.6E-8 T 12-10-2018 IPR038591 NolW-like superfamily YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 Pfam PF03958 Bacterial type II/III secretion system short domain 166 227 4.7E-11 T 12-10-2018 IPR005644 NolW-like YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 458 1.7E-14 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 293 317 1.7E-14 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_3967 0890bc369dfba63dcb77b9088e86d591 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 439 1.7E-14 T 12-10-2018 IPR001775 GspD/PilQ family YpsIP31758_0406 56529e8c5e65c0a8b8e96ac9fb34c077 929 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 3.2E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0406 56529e8c5e65c0a8b8e96ac9fb34c077 929 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 1.9E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0406 56529e8c5e65c0a8b8e96ac9fb34c077 929 Gene3D G3DSA:2.180.10.10 6 669 5.8E-233 T 12-10-2018 YpsIP31758_0637 f50f4b6efeca53799379a627a16d1c18 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 84 1.1E-6 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YpsIP31758_0637 f50f4b6efeca53799379a627a16d1c18 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 2.2E-14 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YpsIP31758_0637 f50f4b6efeca53799379a627a16d1c18 88 SUPERFAMILY SSF101498 42 85 2.75E-7 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 142 343 1.7E-49 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 Pfam PF09850 Type VI secretion system protein DotU 145 336 3.7E-42 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 Gene3D G3DSA:3.30.1330.60 355 510 2.5E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 SUPERFAMILY SSF103088 385 507 1.01E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 Pfam PF00691 OmpA family 398 501 8.5E-11 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_3422 585964d1afa53580a15af9f914a1b3a6 536 Gene3D G3DSA:1.25.40.590 140 292 1.1E-33 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 7.9E-201 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 Gene3D G3DSA:1.10.400.20 287 410 4.9E-174 T 12-10-2018 YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 SUPERFAMILY SSF51569 4 425 2.56E-173 T 12-10-2018 YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 Gene3D G3DSA:3.20.20.70 8 414 4.9E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 PIRSF PIRSF009264 1 429 2.9E-211 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 YpsIP31758_0942 6b7454d6a9412757bd16313d641eb670 432 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 1.0E-198 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.2E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 4.4E-31 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF51621 249 549 1.94E-110 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF52009 125 246 8.24E-37 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF47831 23 143 1.96E-34 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PIRSF PIRSF000732 1 574 7.4E-219 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.50.30.10 4 233 1.1E-82 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:1.10.274.10 21 146 1.1E-82 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.20.20.60 234 575 4.5E-128 T 12-10-2018 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 1.5E-260 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YpsIP31758_1316 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 9.4E-126 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 676 2.1E-197 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 Gene3D G3DSA:2.40.170.20 167 676 3.6E-125 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 Gene3D G3DSA:2.170.130.10 43 166 1.5E-42 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 4.1E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 SUPERFAMILY SSF56935 44 676 2.31E-98 T 12-10-2018 YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 12-10-2018 IPR010916 TonB box, conserved site YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 Pfam PF00593 TonB dependent receptor 274 674 3.3E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_3801 2866c47e5abfbb9bc609bb09f1922411 676 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 676 3.7E-155 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 4.4E-204 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.7E-21 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 SUPERFAMILY SSF55190 2 96 7.98E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Gene3D G3DSA:3.30.1360.70 1 106 5.1E-35 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 SMART SM00836 460 576 1.2E-37 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Pfam PF00750 tRNA synthetases class I (R) 102 446 1.2E-166 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 SMART SM01016 5 87 8.0E-28 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Pfam PF05746 DALR anticodon binding domain 460 576 2.8E-34 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 SUPERFAMILY SSF47323 454 576 1.77E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Gene3D G3DSA:1.10.730.10 454 576 1.2E-32 T 12-10-2018 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Gene3D G3DSA:3.40.50.620 108 453 1.4E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 SUPERFAMILY SSF52374 109 451 4.07E-95 T 12-10-2018 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.625 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_2043 0555fdfe13d7b7a5140322d9dc9a1012 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YpsIP31758_0197 bbf9097515f883443376dc71079528be 249 Gene3D G3DSA:3.40.50.10090 4 245 1.9E-68 T 12-10-2018 YpsIP31758_0197 bbf9097515f883443376dc71079528be 249 Gene3D G3DSA:3.40.50.10090 32 165 1.9E-68 T 12-10-2018 YpsIP31758_0197 bbf9097515f883443376dc71079528be 249 SUPERFAMILY SSF69618 1 247 1.44E-56 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_0197 bbf9097515f883443376dc71079528be 249 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 5.8E-45 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 Gene3D G3DSA:3.40.30.10 1 184 2.5E-63 T 12-10-2018 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 Pfam PF00255 Glutathione peroxidase 5 111 8.6E-40 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 184 51.072 T 12-10-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 PIRSF PIRSF000303 1 184 1.9E-61 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 YpsIP31758_1721 3faa5484b37abb2499dfb8955197610a 184 SUPERFAMILY SSF52833 4 182 2.76E-54 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3036 2ef9636158c6a42d8333aec2fb27927c 383 Gene3D G3DSA:3.30.1890.10 67 333 6.0E-90 T 12-10-2018 YpsIP31758_3036 2ef9636158c6a42d8333aec2fb27927c 383 SUPERFAMILY SSF160355 67 333 3.79E-81 T 12-10-2018 YpsIP31758_3036 2ef9636158c6a42d8333aec2fb27927c 383 Pfam PF02706 Chain length determinant protein 28 125 5.3E-22 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 YpsIP31758_3036 2ef9636158c6a42d8333aec2fb27927c 383 Gene3D G3DSA:1.10.287.210 210 320 6.0E-90 T 12-10-2018 YpsIP31758_4043 813c2bb66908e8a18cba8d28ec82bc99 282 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 11 280 7.8E-115 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_4043 813c2bb66908e8a18cba8d28ec82bc99 282 Pfam PF11692 Protein of unknown function (DUF3289) 12 280 1.9E-111 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 24 126 12.926 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 Pfam PF02049 Flagellar hook-basal body complex protein FliE 50 125 2.2E-21 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 52 124 2.9E-13 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 106 2.9E-8 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 111 124 2.9E-8 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_0630 2f933f05beee93604839c92dbcb6b30d 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 56 72 2.9E-8 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YpsIP31758_2835 eb529d785dd614756c992ad1ad9afd3f 159 SUPERFAMILY SSF55040 11 155 5.36E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2835 eb529d785dd614756c992ad1ad9afd3f 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.065 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2835 eb529d785dd614756c992ad1ad9afd3f 159 Gene3D G3DSA:3.30.70.640 1 159 3.0E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2835 eb529d785dd614756c992ad1ad9afd3f 159 Pfam PF01967 MoaC family 15 150 2.2E-54 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_2835 eb529d785dd614756c992ad1ad9afd3f 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 3.4E-71 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05488 PAAR motif 195 259 5.4E-16 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Gene3D G3DSA:2.60.200.60 181 268 6.4E-18 T 12-10-2018 YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF03527 RHS protein 1282 1314 2.2E-10 T 12-10-2018 IPR001826 RHS protein YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 830 870 9.4E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 922 961 2.0E-8 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 852 892 1.4E-5 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1177 1207 1.0E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 657 696 0.0024 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 788 826 5.0E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 676 1.1E-6 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Gene3D G3DSA:2.180.10.10 1102 1389 2.7E-39 T 12-10-2018 YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Gene3D G3DSA:2.180.10.10 813 1097 4.1E-7 T 12-10-2018 YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05593 RHS Repeat 852 886 1.4E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05593 RHS Repeat 922 951 7.9E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05593 RHS Repeat 657 694 3.9E-6 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05593 RHS Repeat 1177 1205 2.7E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Pfam PF05593 RHS Repeat 788 824 6.2E-5 T 12-10-2018 IPR031325 RHS repeat YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 Gene3D G3DSA:3.90.930.1 569 705 2.0E-11 T 12-10-2018 YpsIP31758_0341 8e9cf54b81c78c15f32373f526180d8c 1527 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1310 1389 9.1E-25 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_0529 53b466806263f11a2db88c85bfc126ef 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 283 1.6E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0529 53b466806263f11a2db88c85bfc126ef 293 SUPERFAMILY SSF161098 52 281 5.89E-45 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0529 53b466806263f11a2db88c85bfc126ef 293 Gene3D G3DSA:1.10.3720.10 48 292 4.8E-55 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1843 c8a3eb09d070e54441cb40772a3825e6 1023 Pfam PF07520 Virulence factor SrfB 1 1020 0.0 T 12-10-2018 IPR009216 Virulence factor SrfB YpsIP31758_1843 c8a3eb09d070e54441cb40772a3825e6 1023 PIRSF PIRSF034585 1 1023 0.0 T 12-10-2018 IPR009216 Virulence factor SrfB YpsIP31758_0859 f848318234109885c5c36c9ff7efde8d 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 18 165 7.9E-11 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 YpsIP31758_0859 f848318234109885c5c36c9ff7efde8d 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.498 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 YpsIP31758_0859 f848318234109885c5c36c9ff7efde8d 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 177 7.3E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 YpsIP31758_0859 f848318234109885c5c36c9ff7efde8d 192 Gene3D G3DSA:1.20.120.740 5 192 1.8E-57 T 12-10-2018 YpsIP31758_0859 f848318234109885c5c36c9ff7efde8d 192 SUPERFAMILY SSF101327 8 176 4.97E-51 T 12-10-2018 IPR036255 YgfB-like superfamily YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 3.9E-50 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 Gene3D G3DSA:3.90.110.10 170 436 3.7E-99 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 SUPERFAMILY SSF56327 172 435 8.63E-92 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.1E-44 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 5.0E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 Gene3D G3DSA:3.40.50.720 1 169 3.4E-61 T 12-10-2018 YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 SUPERFAMILY SSF51735 3 169 1.15E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3951 329bd732978288e2ee15f0815e84983a 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 SUPERFAMILY SSF52540 195 675 1.98E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 500 682 1.5E-25 T 12-10-2018 YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 345 499 1.4E-21 T 12-10-2018 YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 6.7E-65 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 1.2E-39 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Gene3D G3DSA:3.40.50.300 188 335 4.6E-28 T 12-10-2018 YpsIP31758_2536 ba36d30702c213f0343f87971d6e7394 684 Pfam PF13361 UvrD-like helicase C-terminal domain 587 659 5.6E-13 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YpsIP31758_1035 5f7091e68217f528b4814283a1022138 182 PIRSF PIRSF011484 1 180 2.4E-68 T 12-10-2018 IPR009822 YaeQ YpsIP31758_1035 5f7091e68217f528b4814283a1022138 182 SMART SM01322 1 176 7.4E-117 T 12-10-2018 IPR009822 YaeQ YpsIP31758_1035 5f7091e68217f528b4814283a1022138 182 Pfam PF07152 YaeQ protein 1 173 2.5E-74 T 12-10-2018 IPR009822 YaeQ YpsIP31758_1035 5f7091e68217f528b4814283a1022138 182 SUPERFAMILY SSF52980 2 178 2.68E-70 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_1035 5f7091e68217f528b4814283a1022138 182 Gene3D G3DSA:3.10.640.10 1 181 2.2E-75 T 12-10-2018 IPR038590 YaeQ superfamily YpsIP31758_1563 cec1a0546b7174d0efc9ef10cc0fc264 194 Gene3D G3DSA:1.10.10.10 102 190 2.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1563 cec1a0546b7174d0efc9ef10cc0fc264 194 SUPERFAMILY SSF46894 123 188 2.58E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_1563 cec1a0546b7174d0efc9ef10cc0fc264 194 SMART SM00421 130 187 1.1E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_1563 cec1a0546b7174d0efc9ef10cc0fc264 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 183 5.8E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YpsIP31758_3168 1a10112c55de80dc7726586a846eec6c 257 SUPERFAMILY SSF56235 2 252 1.09E-50 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_3168 1a10112c55de80dc7726586a846eec6c 257 Gene3D G3DSA:3.60.20.10 1 256 3.1E-97 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_3168 1a10112c55de80dc7726586a846eec6c 257 Pfam PF13230 Glutamine amidotransferases class-II 1 253 2.9E-113 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 SUPERFAMILY SSF56194 205 342 7.19E-52 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Pfam PF01565 FAD binding domain 22 153 1.7E-24 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 2.2E-35 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 2.2E-104 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.30.465.10 72 221 1.2E-53 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.30.43.10 6 71 2.4E-16 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 SUPERFAMILY SSF56176 7 194 1.45E-43 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 86.794 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3872 71e0bdf8546051a3bf191320536fac32 345 Gene3D G3DSA:3.90.78.10 222 345 1.3E-45 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_0171 6976622be8ba9e18b7411adcfe80511a 176 Gene3D G3DSA:2.60.40.1090 24 175 2.2E-24 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_0171 6976622be8ba9e18b7411adcfe80511a 176 Pfam PF16970 Type-1 fimbrial protein, A 52 175 4.2E-8 T 12-10-2018 IPR039458 Type-1 fimbrial protein, A YpsIP31758_0171 6976622be8ba9e18b7411adcfe80511a 176 SUPERFAMILY SSF49401 25 175 1.29E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 77 251 9.0E-66 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 Pfam PF06276 Ferric iron reductase FhuF-like transporter 83 226 1.0E-26 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 230 250 1.1E-6 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 230 248 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 6 22 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 186 201 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 47 64 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 115 129 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 162 178 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 83 98 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_2449 ea6c1a1cfbc9dae823ee451d622b99c3 259 PRINTS PR01714 Ferric iron reductase signature 204 220 2.4E-45 T 12-10-2018 IPR008090 Ferric iron reductase YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 Gene3D G3DSA:3.40.190.10 114 325 6.1E-139 T 12-10-2018 YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 14 326 2.5E-176 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 Pfam PF13531 Bacterial extracellular solute-binding protein 41 280 4.1E-44 T 12-10-2018 YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 12-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 Gene3D G3DSA:3.40.190.10 27 295 6.1E-139 T 12-10-2018 YpsIP31758_0090 bf03ea02f00720b2d96b23e78698adfd 329 SUPERFAMILY SSF53850 21 326 2.08E-91 T 12-10-2018 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 2.9E-83 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 Gene3D G3DSA:3.30.1360.60 397 477 2.9E-31 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 Pfam PF00367 phosphotransferase system, EIIB 404 436 2.4E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 8.6E-227 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 460 2.8E-26 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YpsIP31758_1586 892276d58b980278d1dc0b83b73c0a0f 477 SUPERFAMILY SSF55604 401 474 1.14E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YpsIP31758_2643 44f3e868e858502eed11a40b04bdd665 321 Gene3D G3DSA:1.10.3720.10 32 316 1.5E-54 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2643 44f3e868e858502eed11a40b04bdd665 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 317 5.7E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2643 44f3e868e858502eed11a40b04bdd665 321 SUPERFAMILY SSF161098 33 312 4.49E-56 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1433 b40f6a9c358ed4a6dcddf56c20f8f21c 230 Gene3D G3DSA:3.20.20.450 1 227 6.9E-42 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_1433 b40f6a9c358ed4a6dcddf56c20f8f21c 230 SUPERFAMILY SSF141868 12 226 6.15E-21 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_1433 b40f6a9c358ed4a6dcddf56c20f8f21c 230 Pfam PF00563 EAL domain 14 218 7.6E-14 T 12-10-2018 IPR001633 EAL domain YpsIP31758_1433 b40f6a9c358ed4a6dcddf56c20f8f21c 230 SMART SM00052 1 223 1.2E-5 T 12-10-2018 IPR001633 EAL domain YpsIP31758_2905 cf3cc681174d619d8f2d807c92213b71 473 Gene3D G3DSA:2.40.160.10 29 450 9.5E-33 T 12-10-2018 IPR023614 Porin domain superfamily YpsIP31758_2905 cf3cc681174d619d8f2d807c92213b71 473 Pfam PF03573 outer membrane porin, OprD family 39 442 1.8E-22 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 YpsIP31758_0526 fedaf69cf7620e6578082860ff349609 1117 Gene3D G3DSA:1.50.10.10 602 1026 6.5E-72 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 YpsIP31758_0526 fedaf69cf7620e6578082860ff349609 1117 SUPERFAMILY SSF48208 567 1091 7.99E-37 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 Pfam PF00202 Aminotransferase class-III 27 420 5.3E-130 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 Gene3D G3DSA:3.90.1150.10 10 415 9.8E-175 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 PIRSF PIRSF000521 31 166 6.9E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 PIRSF PIRSF000521 176 423 1.1E-21 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 2.6E-185 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 SUPERFAMILY SSF53383 1 421 1.38E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 Gene3D G3DSA:3.40.640.10 61 330 9.8E-175 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_2845 162cec9b1702d29bcd4e65d5a696cb2e 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.989 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 Gene3D G3DSA:3.30.300.30 366 464 3.6E-13 T 12-10-2018 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 Gene3D G3DSA:3.40.50.12780 13 364 2.9E-65 T 12-10-2018 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 SUPERFAMILY SSF56801 11 462 9.29E-91 T 12-10-2018 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 455 6.1E-117 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 Pfam PF00501 AMP-binding enzyme 16 365 5.5E-50 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YpsIP31758_1486 0de98347f26e692f6984ccd1e7874e59 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site YpsIP31758_3726 e8bdd4ffc39e557790c8bf45db9d0ae3 310 Pfam PF04754 Putative transposase, YhgA-like 6 207 4.3E-89 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like YpsIP31758_3726 e8bdd4ffc39e557790c8bf45db9d0ae3 310 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 308 7.1E-69 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 SUPERFAMILY SSF53218 3 187 3.4E-48 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 Gene3D G3DSA:3.40.980.10 2 195 1.3E-64 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 4.1E-40 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 SMART SM00852 7 153 8.1E-22 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_3470 c88625a97d1e646e4330a22694f8c042 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 3.6E-28 T 12-10-2018 IPR001453 MoaB/Mog domain YpsIP31758_0254 feb6a1129588d7de67b011ca54f654f4 771 Pfam PF16967 E-set like domain 270 337 1.1E-22 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 SUPERFAMILY SSF53178 4 193 3.4E-68 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 2.9E-52 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 Gene3D G3DSA:3.40.50.1470 1 195 4.3E-72 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.323 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YpsIP31758_2074 3affda2f99ae3b6ca676bbf3d199b842 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 1.1E-68 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YpsIP31758_1394 9df4b95254e50a22b2c95c85bb92c320 170 Pfam PF03918 Cytochrome C biogenesis protein 7 145 2.7E-56 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family YpsIP31758_1394 9df4b95254e50a22b2c95c85bb92c320 170 Gene3D G3DSA:1.10.8.640 18 103 8.2E-38 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YpsIP31758_1541 98abf858745c5ebf8614cbdfd7267ce1 339 SUPERFAMILY SSF51430 1 313 1.7E-92 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_1541 98abf858745c5ebf8614cbdfd7267ce1 339 Gene3D G3DSA:3.20.20.100 1 326 5.8E-104 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_1541 98abf858745c5ebf8614cbdfd7267ce1 339 Pfam PF00248 Aldo/keto reductase family 15 309 9.8E-67 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_0490 bbac608414a79bac7f27656dc7f463b9 433 PIRSF PIRSF002808 1 426 1.8E-33 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 YpsIP31758_0490 bbac608414a79bac7f27656dc7f463b9 433 Pfam PF07690 Major Facilitator Superfamily 17 308 1.2E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0490 bbac608414a79bac7f27656dc7f463b9 433 SUPERFAMILY SSF103473 3 413 1.96E-79 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0490 bbac608414a79bac7f27656dc7f463b9 433 Gene3D G3DSA:1.20.1250.20 214 419 3.6E-27 T 12-10-2018 YpsIP31758_0490 bbac608414a79bac7f27656dc7f463b9 433 Gene3D G3DSA:1.20.1250.20 1 198 6.1E-46 T 12-10-2018 YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 2.8E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 185 246 9.6E-7 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 Gene3D G3DSA:1.10.287.1080 12 142 4.2E-45 T 12-10-2018 YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 Gene3D G3DSA:1.10.287.1080 146 279 3.3E-47 T 12-10-2018 YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 1.7E-106 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 SUPERFAMILY SSF101386 153 253 7.29E-23 T 12-10-2018 YpsIP31758_3318 28166a4f05e5857a7d15380c3dd8b4ac 280 SUPERFAMILY SSF101386 14 114 5.23E-25 T 12-10-2018 YpsIP31758_3729 248b7e982b5968dce96c43264d93b77a 195 SUPERFAMILY SSF54523 41 195 5.96E-48 T 12-10-2018 YpsIP31758_3729 248b7e982b5968dce96c43264d93b77a 195 Gene3D G3DSA:3.30.1690.10 41 195 3.1E-45 T 12-10-2018 YpsIP31758_3729 248b7e982b5968dce96c43264d93b77a 195 Pfam PF08805 PilS N terminal 45 194 1.6E-35 T 12-10-2018 IPR014911 Type 4 secretion system, PilS, N-terminal YpsIP31758_3624 3c9965e0cb829dcb82b69440a403aaf0 1312 Gene3D G3DSA:2.150.10.10 197 269 2.6E-6 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal YpsIP31758_3624 3c9965e0cb829dcb82b69440a403aaf0 1312 SUPERFAMILY SSF101967 210 265 1.44E-5 T 12-10-2018 YpsIP31758_3624 3c9965e0cb829dcb82b69440a403aaf0 1312 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 976 1312 6.3E-64 T 12-10-2018 IPR007452 Translocation and assembly module TamB YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 171 242 3.0E-25 T 12-10-2018 YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 9.5E-40 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 Pfam PF08534 Redoxin 5 160 6.5E-33 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 SUPERFAMILY SSF52833 2 242 2.17E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 4 165 3.1E-62 T 12-10-2018 YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 173 191 3.8E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 228 241 3.8E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 214 227 3.8E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_0136 b00f288991552a5971333049b6c74594 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-19 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YpsIP31758_4054 33cf6219b588b1d892f02f692b2c14f6 289 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 17 286 8.0E-130 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_4054 33cf6219b588b1d892f02f692b2c14f6 289 Pfam PF11692 Protein of unknown function (DUF3289) 18 286 3.8E-115 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_1747 b10956c74c395751ce2282af1d33110e 354 SUPERFAMILY SSF141523 98 235 9.81E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YpsIP31758_1747 b10956c74c395751ce2282af1d33110e 354 Gene3D G3DSA:2.40.440.10 23 306 3.8E-85 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YpsIP31758_1747 b10956c74c395751ce2282af1d33110e 354 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 1.2E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 SUPERFAMILY SSF56024 254 394 2.92E-18 T 12-10-2018 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 PIRSF PIRSF000850 1 452 4.9E-263 T 12-10-2018 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 Gene3D G3DSA:3.30.870.10 25 233 5.5E-176 T 12-10-2018 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 Pfam PF13091 PLD-like domain 258 403 3.0E-21 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 SUPERFAMILY SSF56024 11 212 3.77E-27 T 12-10-2018 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 Gene3D G3DSA:3.30.870.10 19 448 5.5E-176 T 12-10-2018 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 SMART SM00155 353 380 0.0025 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 YpsIP31758_3207 172913fc2997faade7ed242c11d8dbf4 452 SMART SM00155 134 160 0.0049 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 YpsIP31758_3038 4adf2ffc6d9f43c6b54fbd581e49377f 247 Pfam PF00535 Glycosyl transferase family 2 4 126 2.0E-24 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_3038 4adf2ffc6d9f43c6b54fbd581e49377f 247 Gene3D G3DSA:3.90.550.10 1 228 4.3E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3038 4adf2ffc6d9f43c6b54fbd581e49377f 247 SUPERFAMILY SSF53448 2 205 4.74E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_1805 ef70c414d629867e598b12f2a12ddaf1 219 Pfam PF02308 MgtC family 10 138 2.7E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1805 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.7E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1805 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 3.7E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1805 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 3.7E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_1805 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.7E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YpsIP31758_0937 ed62ac55db664cc787e5e7e7ede98cee 146 Pfam PF03610 PTS system fructose IIA component 3 115 7.0E-28 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YpsIP31758_0937 ed62ac55db664cc787e5e7e7ede98cee 146 Gene3D G3DSA:3.40.50.510 1 144 2.2E-36 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 YpsIP31758_0937 ed62ac55db664cc787e5e7e7ede98cee 146 SUPERFAMILY SSF53062 1 130 1.31E-35 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 YpsIP31758_2717 5ff73e7ef8e09e76b705e32d437ea78b 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 1.6E-139 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 YpsIP31758_2717 5ff73e7ef8e09e76b705e32d437ea78b 399 Gene3D G3DSA:1.20.1720.10 11 390 3.5E-102 T 12-10-2018 YpsIP31758_2717 5ff73e7ef8e09e76b705e32d437ea78b 399 Pfam PF07690 Major Facilitator Superfamily 16 358 1.7E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2717 5ff73e7ef8e09e76b705e32d437ea78b 399 SUPERFAMILY SSF103473 5 394 1.15E-69 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0315 328851187847c7673e82c6aca08887de 146 SUPERFAMILY SSF160719 30 137 5.23E-17 T 12-10-2018 YpsIP31758_0315 328851187847c7673e82c6aca08887de 146 Gene3D G3DSA:3.10.450.40 23 139 7.7E-7 T 12-10-2018 YpsIP31758_0315 328851187847c7673e82c6aca08887de 146 Pfam PF04965 Gene 25-like lysozyme 34 120 1.6E-17 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_0315 328851187847c7673e82c6aca08887de 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 141 2.6E-38 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 7.2E-24 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 Gene3D G3DSA:3.40.50.1100 103 401 4.1E-141 T 12-10-2018 YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 TIGRFAM TIGR00260 thrC: threonine synthase 53 397 3.7E-121 T 12-10-2018 IPR004450 Threonine synthase-like YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 SUPERFAMILY SSF53686 1 426 4.06E-132 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 Pfam PF14821 Threonine synthase N terminus 8 80 5.3E-11 T 12-10-2018 IPR029144 Threonine synthase, N-terminal YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 Gene3D G3DSA:3.40.50.1100 85 394 4.1E-141 T 12-10-2018 YpsIP31758_3474 5e59fb12a288dac4a14b7783cbf80148 429 Gene3D G3DSA:3.90.1380.10 1 81 6.8E-34 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily YpsIP31758_2720 a73d7a4ae17e4e339f01d3b3e5722fce 94 SUPERFAMILY SSF50715 1 94 1.92E-29 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2720 a73d7a4ae17e4e339f01d3b3e5722fce 94 Pfam PF01386 Ribosomal L25p family 4 91 7.8E-23 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YpsIP31758_2720 a73d7a4ae17e4e339f01d3b3e5722fce 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 26.652 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 YpsIP31758_2720 a73d7a4ae17e4e339f01d3b3e5722fce 94 Gene3D G3DSA:2.40.240.10 1 94 1.5E-32 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YpsIP31758_2720 a73d7a4ae17e4e339f01d3b3e5722fce 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 94 2.0E-45 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YpsIP31758_3943 10cadb764b088c8d492781c30ce45cd2 132 Pfam PF06836 Protein of unknown function (DUF1240) 39 132 2.1E-33 T 12-10-2018 IPR010665 Protein of unknown function DUF1240 YpsIP31758_1741 1b39e1144afcc9376494172dea65d14a 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 YpsIP31758_1741 1b39e1144afcc9376494172dea65d14a 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 1.9E-19 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 YpsIP31758_1741 1b39e1144afcc9376494172dea65d14a 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 4.4E-34 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 YpsIP31758_1741 1b39e1144afcc9376494172dea65d14a 123 SUPERFAMILY SSF89360 19 112 1.37E-27 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_1741 1b39e1144afcc9376494172dea65d14a 123 Gene3D G3DSA:2.60.300.12 18 123 1.1E-35 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_3614 195d794af91b38c8fec2ecbe19502dba 115 SUPERFAMILY SSF46955 3 74 1.46E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3614 195d794af91b38c8fec2ecbe19502dba 115 Gene3D G3DSA:1.10.10.10 2 74 1.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3614 195d794af91b38c8fec2ecbe19502dba 115 Pfam PF02316 Mu DNA-binding domain 9 61 8.5E-14 T 12-10-2018 IPR003314 Mu-type HTH domain GO:0003677 YpsIP31758_1053 056469338fb23e76f5e42acc31aae2a3 239 Gene3D G3DSA:3.40.50.150 52 181 3.8E-12 T 12-10-2018 YpsIP31758_1053 056469338fb23e76f5e42acc31aae2a3 239 Pfam PF08241 Methyltransferase domain 77 125 1.1E-8 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 YpsIP31758_1053 056469338fb23e76f5e42acc31aae2a3 239 SUPERFAMILY SSF53335 77 182 2.87E-15 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 SUPERFAMILY SSF56784 1 271 6.98E-68 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 2.6E-5 T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 2.6E-5 T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 2.6E-5 T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 Gene3D G3DSA:3.30.1240.10 84 196 8.1E-62 T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 2.5E-63 T 12-10-2018 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 Gene3D G3DSA:3.40.50.1000 4 267 8.1E-62 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.3E-64 T 12-10-2018 IPR000150 Cof family GO:0016787 YpsIP31758_2847 5758850a0c412998f6d537ce40aa8e72 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 3.6E-24 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 YpsIP31758_0325 d71e755d21c6abff66cdec34183dbf9c 462 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 215 454 1.5E-77 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_0325 d71e755d21c6abff66cdec34183dbf9c 462 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 9 457 3.2E-158 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_0325 d71e755d21c6abff66cdec34183dbf9c 462 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 112 1.9E-11 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_1929 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Gene3D G3DSA:3.90.870.10 1 206 2.8E-71 T 12-10-2018 YpsIP31758_1929 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 SUPERFAMILY SSF55821 1 203 1.86E-66 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YpsIP31758_1929 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Pfam PF01300 Telomere recombination 23 198 8.2E-47 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 YpsIP31758_1929 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 5.8E-74 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 YpsIP31758_1060 48a23a23f7e76e2df74b5ae26cc9655e 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 360 2.8E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1060 48a23a23f7e76e2df74b5ae26cc9655e 388 SUPERFAMILY SSF161098 174 356 2.88E-43 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1060 48a23a23f7e76e2df74b5ae26cc9655e 388 Gene3D G3DSA:1.10.3720.10 171 361 3.0E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3691 337a4aa9aa1d27dc637e700dd401bf34 143 SUPERFAMILY SSF55724 7 142 3.87E-37 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_3691 337a4aa9aa1d27dc637e700dd401bf34 143 Pfam PF08786 DcrB 13 139 2.0E-30 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_3691 337a4aa9aa1d27dc637e700dd401bf34 143 Gene3D G3DSA:3.40.1000.10 10 143 2.8E-27 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 Pfam PF00771 FHIPEP family 29 663 1.1E-217 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 Gene3D G3DSA:1.10.490.80 577 671 5.8E-25 T 12-10-2018 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PIRSF PIRSF005419 1 676 6.2E-226 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 671 1.3E-269 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 Gene3D G3DSA:1.10.8.540 487 575 3.3E-31 T 12-10-2018 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 8.1E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 Gene3D G3DSA:3.40.30.60 356 486 5.9E-10 T 12-10-2018 YpsIP31758_3819 20b136d432aadb6d0180971cbd17296b 682 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 139 162 - T 12-10-2018 IPR025505 FHIPEP conserved site YpsIP31758_0852 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.145 T 12-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 YpsIP31758_0852 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Pfam PF01810 LysE type translocator 14 202 3.6E-48 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_0852 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 7.5E-66 T 12-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 YpsIP31758_B0121 1531da0b0f0dbeae28c0c2594c95c82f 1031 Gene3D G3DSA:3.40.50.300 727 889 5.5E-6 T 12-10-2018 YpsIP31758_B0121 1531da0b0f0dbeae28c0c2594c95c82f 1031 SUPERFAMILY SSF52540 505 905 1.59E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Gene3D G3DSA:2.60.40.2610 661 751 1.2E-12 T 12-10-2018 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 SUPERFAMILY SSF141729 34 154 1.03E-28 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Gene3D G3DSA:2.60.40.3110 268 356 3.9E-29 T 12-10-2018 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Pfam PF13954 PapC N-terminal domain 35 178 4.9E-33 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Pfam PF00577 Outer membrane usher protein 197 745 1.4E-159 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Gene3D G3DSA:3.10.20.410 34 155 3.2E-21 T 12-10-2018 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Gene3D G3DSA:2.60.40.2070 755 830 5.6E-25 T 12-10-2018 YpsIP31758_4106 ee243d90f3faf1f9223c16bc3eefeb93 830 Pfam PF13953 PapC C-terminal domain 758 812 4.1E-14 T 12-10-2018 IPR025949 PapC-like, C-terminal domain YpsIP31758_1131 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 1.5E-28 T 12-10-2018 IPR033436 MucB/RseB, C-terminal YpsIP31758_1131 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF03888 MucB/RseB N-terminal domain 27 196 1.8E-60 T 12-10-2018 IPR033434 MucB/RseB, N-terminal YpsIP31758_1131 4552ec45de98101f8681438f0c62fbfc 318 Gene3D G3DSA:3.30.200.100 218 318 4.1E-30 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily YpsIP31758_1131 4552ec45de98101f8681438f0c62fbfc 318 Gene3D G3DSA:2.50.20.10 28 209 2.1E-52 T 12-10-2018 YpsIP31758_1131 4552ec45de98101f8681438f0c62fbfc 318 PIRSF PIRSF005427 1 318 8.1E-88 T 12-10-2018 IPR005588 MucB/RseB YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SUPERFAMILY SSF55846 9 174 6.41E-46 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 158 4.0E-22 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SMART SM00644 7 158 7.0E-31 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 Gene3D G3DSA:3.40.80.10 17 172 6.6E-50 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 Gene3D G3DSA:1.10.101.10 173 254 4.5E-29 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 YpsIP31758_1649 d7c13c5f9e9006f1b7c5c24d0c1b9944 254 SUPERFAMILY SSF47090 174 254 8.63E-22 T 12-10-2018 IPR036365 PGBD-like superfamily YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.772 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 1.2E-101 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.2E-162 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 SUPERFAMILY SSF51569 1 316 6.07E-116 T 12-10-2018 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_3472 e85ff4edc623ab32d86b88ad3f055bb7 317 Gene3D G3DSA:3.20.20.70 2 317 1.3E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 SUPERFAMILY SSF53681 29 129 4.71E-31 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 5.3E-25 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 274 2.4E-84 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 SUPERFAMILY SSF53681 131 283 4.14E-32 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.898 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 Gene3D G3DSA:3.40.50.1860 30 265 1.8E-90 T 12-10-2018 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 Gene3D G3DSA:3.40.50.1860 118 231 1.8E-90 T 12-10-2018 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_0143 909721c1d6736dcf29a97fff3e0a1bc7 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_3788 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 PIRSF PIRSF037118 1 394 4.5E-180 T 12-10-2018 IPR017115 Tellurite resistance, TerA YpsIP31758_3788 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 Pfam PF02342 TerD domain 25 159 2.4E-29 T 12-10-2018 IPR003325 TerD domain YpsIP31758_3788 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 Gene3D G3DSA:2.60.60.30 15 158 3.5E-34 T 12-10-2018 YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 Gene3D G3DSA:3.90.1670.10 26 309 9.3E-92 T 12-10-2018 IPR024064 FdhE-like superfamily YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 SUPERFAMILY SSF144020 26 308 2.62E-95 T 12-10-2018 IPR024064 FdhE-like superfamily YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 PIRSF PIRSF018296 1 309 1.4E-135 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 1.7E-120 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 50.121 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YpsIP31758_4116 1bcabcfceff15781d554e34b16605c43 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 3.4E-114 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YpsIP31758_2008 7fe4e672ae216c7accac44f23ecdd7df 362 SUPERFAMILY SSF53955 54 360 2.67E-96 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_2008 7fe4e672ae216c7accac44f23ecdd7df 362 Gene3D G3DSA:1.10.8.350 75 240 6.1E-87 T 12-10-2018 YpsIP31758_2008 7fe4e672ae216c7accac44f23ecdd7df 362 Pfam PF13406 Transglycosylase SLT domain 65 358 1.2E-105 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 YpsIP31758_2008 7fe4e672ae216c7accac44f23ecdd7df 362 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 64 361 8.3E-123 T 12-10-2018 IPR011970 Lytic murein transglycosylase YpsIP31758_2008 7fe4e672ae216c7accac44f23ecdd7df 362 Gene3D G3DSA:1.10.530.10 107 357 6.1E-87 T 12-10-2018 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 ProSitePatterns PS00211 ABC transporters family signature. 601 615 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 SUPERFAMILY SSF90123 135 452 4.32E-66 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 SUPERFAMILY SSF52540 453 699 4.11E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 Gene3D G3DSA:1.20.1560.10 135 449 1.4E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 Gene3D G3DSA:3.90.70.10 6 134 1.4E-11 T 12-10-2018 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 Pfam PF00664 ABC transporter transmembrane region 151 418 8.0E-51 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 Gene3D G3DSA:3.40.50.300 459 713 2.9E-87 T 12-10-2018 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 44 700 2.7E-233 T 12-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 Pfam PF00005 ABC transporter 480 629 3.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1891 ba5f37e842bca4b59c92fab1b5d8e1cb 715 SMART SM00382 489 691 1.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2407 48fd5a1c025dd958fd549c8e55bc1e9a 476 PIRSF PIRSF006603 21 471 3.0E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_2407 48fd5a1c025dd958fd549c8e55bc1e9a 476 Pfam PF01554 MatE 271 432 3.4E-19 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_2407 48fd5a1c025dd958fd549c8e55bc1e9a 476 Pfam PF01554 MatE 41 201 1.0E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_2407 48fd5a1c025dd958fd549c8e55bc1e9a 476 TIGRFAM TIGR00797 matE: MATE efflux family protein 41 445 3.6E-63 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YpsIP31758_1424 03a4d516e88dfa76868e475c38bd703c 240 Pfam PF05036 Sporulation related domain 161 233 1.8E-9 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 YpsIP31758_1424 03a4d516e88dfa76868e475c38bd703c 240 Hamap MF_02022 Cell division protein DedD [dedD]. 14 238 25.48 T 12-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 YpsIP31758_1424 03a4d516e88dfa76868e475c38bd703c 240 SUPERFAMILY SSF110997 161 234 1.7E-11 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 SUPERFAMILY SSF52540 7 228 1.71E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 Pfam PF00005 ABC transporter 28 167 5.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 SMART SM00382 34 268 3.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 SMART SM00382 356 537 2.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 SUPERFAMILY SSF52540 330 551 2.5E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 Pfam PF00005 ABC transporter 348 491 3.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 Gene3D G3DSA:3.40.50.300 325 557 5.8E-64 T 12-10-2018 YpsIP31758_2813 dcae1755ed9160ed693edfdbd9d2c2b4 580 Gene3D G3DSA:3.40.50.300 2 241 2.1E-57 T 12-10-2018 YpsIP31758_2721 c3e5f6f6fdd9906953feb70413b94900 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 5.9E-98 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YpsIP31758_2721 c3e5f6f6fdd9906953feb70413b94900 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.232 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YpsIP31758_2019 57aaf45263bd80fd64b001136616618c 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 29.75 T 12-10-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 YpsIP31758_2019 57aaf45263bd80fd64b001136616618c 109 SUPERFAMILY SSF103481 11 108 9.42E-18 T 12-10-2018 YpsIP31758_2019 57aaf45263bd80fd64b001136616618c 109 Gene3D G3DSA:1.10.3730.20 8 109 4.3E-28 T 12-10-2018 YpsIP31758_2019 57aaf45263bd80fd64b001136616618c 109 Pfam PF00893 Small Multidrug Resistance protein 11 99 3.6E-27 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:3.40.190.10 179 280 1.9E-52 T 12-10-2018 YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 SUPERFAMILY SSF46785 21 101 3.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 SUPERFAMILY SSF53850 105 310 3.08E-37 T 12-10-2018 YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 Pfam PF03466 LysR substrate binding domain 105 309 5.1E-33 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:3.40.190.10 108 306 1.9E-52 T 12-10-2018 YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 Gene3D G3DSA:1.10.10.10 20 107 3.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3808 03046036fbf4ba59cc84cc9df49d2433 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 78 1.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 SMART SM00382 45 241 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 Pfam PF00005 ABC transporter 293 447 8.6E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 Gene3D G3DSA:3.40.50.300 268 524 2.2E-40 T 12-10-2018 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 Gene3D G3DSA:3.40.50.300 4 267 5.4E-51 T 12-10-2018 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 SUPERFAMILY SSF52540 287 506 1.63E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 Pfam PF00005 ABC transporter 36 192 3.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2308 353f42c071bee2a9c97e1f80cc2e9946 525 SUPERFAMILY SSF52540 21 252 1.57E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 Gene3D G3DSA:3.40.190.10 125 170 3.9E-6 T 12-10-2018 YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 Gene3D G3DSA:1.10.10.10 4 93 5.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 Gene3D G3DSA:3.40.190.10 171 270 3.9E-6 T 12-10-2018 YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 SUPERFAMILY SSF46785 7 84 8.95E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3155 72272fc65561a0418504a00f0636fb93 303 SUPERFAMILY SSF53850 101 255 1.71E-7 T 12-10-2018 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.30.42.10 256 358 1.2E-21 T 12-10-2018 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13180 PDZ domain 273 346 2.2E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 141 255 4.8E-39 T 12-10-2018 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 32 140 8.7E-29 T 12-10-2018 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50494 45 253 4.76E-59 T 12-10-2018 IPR009003 Peptidase S1, PA clan YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50156 229 350 4.21E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13365 Trypsin-like peptidase domain 80 214 5.1E-27 T 12-10-2018 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 1.0E-157 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 SMART SM00228 256 338 1.0E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_0455 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Pfam PF07690 Major Facilitator Superfamily 21 412 1.5E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 5.2E-10 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Gene3D G3DSA:1.20.1250.20 262 455 3.9E-21 T 12-10-2018 YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 SUPERFAMILY SSF103473 8 450 1.31E-62 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1680 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Gene3D G3DSA:1.20.1720.10 17 249 3.1E-45 T 12-10-2018 YpsIP31758_2411 382be604d0f3a09a359c6bc9b0c62ef9 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 275 2.2E-65 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YpsIP31758_2411 382be604d0f3a09a359c6bc9b0c62ef9 280 SUPERFAMILY SSF56529 62 277 1.96E-79 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2411 382be604d0f3a09a359c6bc9b0c62ef9 280 Gene3D G3DSA:3.90.850.10 67 280 1.4E-81 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_4097 92929ea5fae49d16e6a455de8d64aa1b 90 Gene3D G3DSA:3.30.160.390 1 83 4.1E-28 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily YpsIP31758_4097 92929ea5fae49d16e6a455de8d64aa1b 90 Pfam PF13356 Arm DNA-binding domain 3 68 2.7E-12 T 12-10-2018 IPR025166 Integrase, DNA-binding domain YpsIP31758_1871 9edc16b03fbed94d5aacd70558c87979 422 SUPERFAMILY SSF103473 22 415 1.7E-62 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1871 9edc16b03fbed94d5aacd70558c87979 422 Pfam PF07690 Major Facilitator Superfamily 43 262 3.1E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1871 9edc16b03fbed94d5aacd70558c87979 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 93 109 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_1871 9edc16b03fbed94d5aacd70558c87979 422 Gene3D G3DSA:1.20.1250.20 33 416 2.9E-46 T 12-10-2018 YpsIP31758_2236 f035fbb2575a042059d940287cefdae6 137 SUPERFAMILY SSF53955 10 107 7.16E-13 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_2236 f035fbb2575a042059d940287cefdae6 137 Gene3D G3DSA:1.10.530.40 1 107 9.6E-13 T 12-10-2018 YpsIP31758_0685 6468a1a6b591eb5a0c3fff450ec74575 356 SUPERFAMILY SSF51735 4 136 1.14E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0685 6468a1a6b591eb5a0c3fff450ec74575 356 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 80 4.1E-9 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_0685 6468a1a6b591eb5a0c3fff450ec74575 356 Gene3D G3DSA:3.40.50.720 3 150 2.2E-15 T 12-10-2018 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 411 1.6E-101 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF50993 1 413 3.92E-91 T 12-10-2018 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF53474 421 662 4.32E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF00326 Prolyl oligopeptidase family 470 681 4.5E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:3.40.50.1820 23 679 6.7E-252 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:2.130.10.120 74 412 6.7E-252 T 12-10-2018 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 503 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 526 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 613 635 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 557 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 471 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2346 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 610 9.1E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.2E-20 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 SMART SM00357 5 69 1.1E-12 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 SUPERFAMILY SSF50249 3 67 1.84E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 27 36 4.9E-12 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 42 60 4.9E-12 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 6 21 4.9E-12 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 PIRSF PIRSF002599 1 69 4.2E-18 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_2574 80047d184959eaa2daaf9939cf3fc927 69 Gene3D G3DSA:2.40.50.140 5 68 5.8E-21 T 12-10-2018 YpsIP31758_3796 3dd3bf506c475b3de7ee269a88761137 266 Pfam PF02219 Methylenetetrahydrofolate reductase 4 265 2.8E-34 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 YpsIP31758_3796 3dd3bf506c475b3de7ee269a88761137 266 SUPERFAMILY SSF51730 4 265 5.49E-50 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like YpsIP31758_3796 3dd3bf506c475b3de7ee269a88761137 266 Gene3D G3DSA:3.20.20.220 1 266 9.3E-44 T 12-10-2018 YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 178 3.1E-17 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 Gene3D G3DSA:3.40.350.10 13 177 2.2E-10 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 Pfam PF00557 Metallopeptidase family M24 186 388 1.0E-34 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 Gene3D G3DSA:3.90.230.10 178 405 4.5E-49 T 12-10-2018 YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 SUPERFAMILY SSF55920 175 403 6.41E-49 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_1308 c628b5d42ba610fc64de443d99bf781d 406 SUPERFAMILY SSF53092 6 176 1.01E-14 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_3199 ebbee38d337c7bc9a6f675468d83e69b 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 6.1E-17 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD YpsIP31758_1700 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.30.200.20 1 92 1.7E-20 T 12-10-2018 YpsIP31758_1700 ace24be9af9f6a516bc461176d46ad44 291 Pfam PF03881 Fructosamine kinase 1 285 6.5E-117 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 YpsIP31758_1700 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.90.1200.10 98 286 8.5E-57 T 12-10-2018 YpsIP31758_1700 ace24be9af9f6a516bc461176d46ad44 291 SUPERFAMILY SSF56112 4 279 2.13E-38 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_1700 ace24be9af9f6a516bc461176d46ad44 291 PIRSF PIRSF006221 1 287 1.5E-91 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 YpsIP31758_2136 1f66e2e2a343c196bb4f8e82a2c3df35 237 Gene3D G3DSA:3.40.50.300 15 237 7.4E-68 T 12-10-2018 YpsIP31758_2136 1f66e2e2a343c196bb4f8e82a2c3df35 237 SUPERFAMILY SSF52540 17 233 3.79E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2136 1f66e2e2a343c196bb4f8e82a2c3df35 237 SMART SM00382 42 226 2.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2136 1f66e2e2a343c196bb4f8e82a2c3df35 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2136 1f66e2e2a343c196bb4f8e82a2c3df35 237 Pfam PF00005 ABC transporter 33 178 2.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1398 4f1e1259c5fc36eb7e64602e77fa4a14 98 Gene3D G3DSA:3.30.70.860 27 98 2.8E-26 T 12-10-2018 IPR035571 UPF0234-like, C-terminal YpsIP31758_1398 4f1e1259c5fc36eb7e64602e77fa4a14 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 2.9E-39 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 YpsIP31758_1398 4f1e1259c5fc36eb7e64602e77fa4a14 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 1.4E-39 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 YpsIP31758_1254 8e852d8205511c02c361c5cd679e614e 225 Gene3D G3DSA:3.30.1380.10 3 196 1.8E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_1254 8e852d8205511c02c361c5cd679e614e 225 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 181 8.2E-38 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 YpsIP31758_1254 8e852d8205511c02c361c5cd679e614e 225 SUPERFAMILY SSF55166 21 182 1.37E-20 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YpsIP31758_0835 02b4681338df9716f8e1264198c9afeb 187 SUPERFAMILY SSF143456 1 187 1.7E-64 T 12-10-2018 YpsIP31758_0835 02b4681338df9716f8e1264198c9afeb 187 Gene3D G3DSA:3.40.1740.10 1 187 4.7E-63 T 12-10-2018 YpsIP31758_0835 02b4681338df9716f8e1264198c9afeb 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.134 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 YpsIP31758_0835 02b4681338df9716f8e1264198c9afeb 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.0E-47 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 Gene3D G3DSA:1.20.1650.10 27 101 6.6E-7 T 12-10-2018 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 Gene3D G3DSA:3.90.1150.10 388 506 5.0E-34 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 Gene3D G3DSA:3.40.640.10 116 387 1.8E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 102 121 6.9E-6 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 420 439 6.9E-6 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 142 161 6.9E-6 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 377 392 6.9E-6 T 12-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 438 2.1E-61 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YpsIP31758_2448 c64e1b914d5aa5ff581648e6140388a7 515 SUPERFAMILY SSF53383 50 505 4.31E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0367 b3691c342d24eb3de10b632daffa5095 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 2.9E-36 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 SMART SM00257 72 116 5.4E-10 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 Gene3D G3DSA:3.10.350.10 65 120 1.9E-10 T 12-10-2018 IPR036779 LysM domain superfamily YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 SUPERFAMILY SSF51261 72 324 5.23E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 Gene3D G3DSA:2.70.70.10 178 327 2.5E-38 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 Pfam PF01476 LysM domain 73 114 6.4E-9 T 12-10-2018 IPR018392 LysM domain YpsIP31758_3294 64de245f81eb4281667d2093f8b617b8 327 Pfam PF01551 Peptidase family M23 227 320 5.7E-32 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_B0092 c0c7d09cbc241f253d7dba4515e3aa4e 376 Pfam PF00589 Phage integrase family 180 357 7.0E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_B0092 c0c7d09cbc241f253d7dba4515e3aa4e 376 SUPERFAMILY SSF56349 33 361 2.03E-34 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_B0092 c0c7d09cbc241f253d7dba4515e3aa4e 376 Gene3D G3DSA:1.10.443.10 174 371 5.0E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_B0092 c0c7d09cbc241f253d7dba4515e3aa4e 376 Gene3D G3DSA:1.10.150.130 26 142 1.3E-11 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 Pfam PF00085 Thioredoxin 5 106 5.2E-34 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 12-10-2018 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 12-10-2018 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 12-10-2018 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 9.3E-39 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 SUPERFAMILY SSF52833 2 107 1.03E-41 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 Gene3D G3DSA:3.40.30.10 1 108 6.1E-38 T 12-10-2018 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 PIRSF PIRSF000077 2 108 4.0E-44 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YpsIP31758_0179 d35a787a906916ffd87744da48c7208c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YpsIP31758_1764 7b710b0a2fbae6f69ba0fc2436c7dff3 545 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 1.4E-49 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 YpsIP31758_1764 7b710b0a2fbae6f69ba0fc2436c7dff3 545 SUPERFAMILY SSF53649 237 539 8.72E-23 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_1764 7b710b0a2fbae6f69ba0fc2436c7dff3 545 Pfam PF00884 Sulfatase 237 525 1.5E-45 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_1764 7b710b0a2fbae6f69ba0fc2436c7dff3 545 Gene3D G3DSA:3.40.720.10 215 545 6.7E-88 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_0421 f374b66684a69a6305aab915e7e7271c 651 Pfam PF04632 Fusaric acid resistance protein family 8 649 6.1E-171 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 YpsIP31758_0421 f374b66684a69a6305aab915e7e7271c 651 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 55.618 T 12-10-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0046942 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 Gene3D G3DSA:2.40.160.20 23 183 3.9E-49 T 12-10-2018 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 9.9E-21 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 144 165 1.1E-26 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 55 67 1.1E-26 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 98 121 1.1E-26 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 171 182 1.1E-26 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 175 183 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_2257 31fcff5e0ed84db1d25a0676aeed00e4 183 SUPERFAMILY SSF56925 29 183 3.92E-26 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 SUPERFAMILY SSF53807 39 310 1.81E-91 T 12-10-2018 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 275 294 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 196 217 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 41 59 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 72 85 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 85 102 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00690 Adhesin family signature 249 267 1.4E-46 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 Gene3D G3DSA:3.40.50.1980 198 311 3.1E-41 T 12-10-2018 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 307 4.5E-80 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 267 285 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 85 104 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 196 213 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 66 84 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 245 262 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 41 62 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 PRINTS PR00691 Adhesin B signature 222 240 1.7E-38 T 12-10-2018 IPR006129 Adhesin B GO:0007155 YpsIP31758_1705 112c2e25fd301f61c17594abfaa8893b 311 Gene3D G3DSA:3.40.50.1980 40 197 2.0E-55 T 12-10-2018 YpsIP31758_3721 745c74cf18be7ec52aa7722e6508da5c 272 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 77 267 1.3E-79 T 12-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:1.25.40.310 1 161 2.5E-74 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF52016 163 372 1.12E-72 T 12-10-2018 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 683 865 1.1E-75 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.40.1060.10 385 681 1.0E-151 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.3E-39 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 402 529 1.0E-151 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF74778 2 160 6.54E-68 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 9.7E-99 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF53732 379 859 2.09E-150 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.4E-67 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 PIRSF PIRSF036687 1 859 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YpsIP31758_3359 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.20.19.10 162 361 2.0E-81 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 YpsIP31758_2001 741f3dcd383fcf21e21fdebc0a23ee8e 181 Gene3D G3DSA:1.20.1550.10 6 181 5.0E-70 T 12-10-2018 IPR023380 DsbB-like superfamily YpsIP31758_2001 741f3dcd383fcf21e21fdebc0a23ee8e 181 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 12 172 22.731 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB YpsIP31758_2001 741f3dcd383fcf21e21fdebc0a23ee8e 181 SUPERFAMILY SSF158442 20 166 7.72E-47 T 12-10-2018 IPR023380 DsbB-like superfamily YpsIP31758_2001 741f3dcd383fcf21e21fdebc0a23ee8e 181 Pfam PF02600 Disulfide bond formation protein DsbB 17 164 1.8E-46 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 283 385 7.3E-86 T 12-10-2018 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:1.10.4030.10 21 148 7.2E-44 T 12-10-2018 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 7.0E-26 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 2.2E-20 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF09312 SurA N-terminal domain 25 142 7.3E-47 T 12-10-2018 IPR015391 SurA N-terminal YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.262 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 283 385 4.51E-33 T 12-10-2018 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF109998 25 201 2.55E-44 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 175 386 7.3E-86 T 12-10-2018 YpsIP31758_3442 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 173 277 3.27E-28 T 12-10-2018 YpsIP31758_3435 a0bbee94c5f440c02e8f5886ecc0d06f 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 1.2E-181 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_3435 a0bbee94c5f440c02e8f5886ecc0d06f 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 492 1.8E-209 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_2656 6a9bf7a5e7dbd0d645acd968a7316311 433 Pfam PF03222 Tryptophan/tyrosine permease family 32 356 4.8E-10 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 YpsIP31758_2656 6a9bf7a5e7dbd0d645acd968a7316311 433 TIGRFAM TIGR00814 stp: serine transporter 20 419 5.7E-179 T 12-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 YpsIP31758_1333 a0740b757a5507a148c354a972854a00 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 412 2.2E-147 T 12-10-2018 IPR010856 Protein of unknown function DUF1479 YpsIP31758_1333 a0740b757a5507a148c354a972854a00 415 SUPERFAMILY SSF51197 3 413 2.84E-153 T 12-10-2018 YpsIP31758_1333 a0740b757a5507a148c354a972854a00 415 Gene3D G3DSA:2.60.120.330 1 415 5.0E-169 T 12-10-2018 IPR027443 Isopenicillin N synthase-like YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.4E-215 T 12-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-85 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.638 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 Gene3D G3DSA:3.20.20.150 2 439 1.9E-182 T 12-10-2018 YpsIP31758_4102 583b3c09d4cc9dbedf610ff3cf10e464 439 SUPERFAMILY SSF51658 4 438 1.6E-173 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 Gene3D G3DSA:3.90.76.10 47 219 1.7E-152 T 12-10-2018 YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 Gene3D G3DSA:3.10.105.10 299 516 1.7E-152 T 12-10-2018 YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 PIRSF PIRSF002741 1 543 3.7E-102 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 458 1.8E-88 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 SUPERFAMILY SSF53850 37 538 4.16E-139 T 12-10-2018 YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site YpsIP31758_1784 4bff23ffe77ad064a4505fd71b16cbe6 547 Gene3D G3DSA:3.40.190.10 220 528 1.7E-152 T 12-10-2018 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 Gene3D G3DSA:3.10.20.10 40 125 1.6E-10 T 12-10-2018 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 Pfam PF02634 FdhD/NarQ family 38 273 1.2E-71 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 274 33.134 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 Gene3D G3DSA:3.40.140.10 127 274 1.2E-45 T 12-10-2018 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 PIRSF PIRSF015626 4 274 5.6E-79 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 SUPERFAMILY SSF53927 25 273 1.2E-79 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YpsIP31758_4120 e5998697f31fc8a22af4347d39a78ceb 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 1.0E-88 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.625 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.4E-12 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 SUPERFAMILY SSF51161 1 256 8.18E-80 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Gene3D G3DSA:2.160.10.10 87 257 1.3E-57 T 12-10-2018 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.8E-159 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.9E-25 T 12-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 YpsIP31758_1010 02bfd66cca228252532f2d221f2c9105 274 Gene3D G3DSA:1.10.166.10 1 70 1.7E-34 T 12-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 YpsIP31758_3358 347486e69c2ebdd22498eedb5f303f15 119 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-63 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 YpsIP31758_3358 347486e69c2ebdd22498eedb5f303f15 119 PIRSF PIRSF006287 1 119 4.3E-50 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 YpsIP31758_3358 347486e69c2ebdd22498eedb5f303f15 119 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.976 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 YpsIP31758_3358 347486e69c2ebdd22498eedb5f303f15 119 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 5.0E-44 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 PIRSF PIRSF000386 1 245 9.0E-102 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:3.40.1280.10 1 160 1.6E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 SUPERFAMILY SSF75217 1 244 3.53E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 119.798 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.9E-110 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.7E-70 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YpsIP31758_3226 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:1.10.1270.20 161 246 1.1E-35 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YpsIP31758_0337 4911f0c7990e7e5f3833a94a9251cdf0 135 Pfam PF01381 Helix-turn-helix 22 76 1.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0337 4911f0c7990e7e5f3833a94a9251cdf0 135 SUPERFAMILY SSF47413 17 83 2.25E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0337 4911f0c7990e7e5f3833a94a9251cdf0 135 SMART SM00530 21 76 2.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0337 4911f0c7990e7e5f3833a94a9251cdf0 135 Gene3D G3DSA:1.10.260.40 18 121 1.3E-18 T 12-10-2018 YpsIP31758_4132 39ff57d9e2d0e147ca3ae0391af76403 190 SUPERFAMILY SSF48150 4 186 1.26E-80 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YpsIP31758_4132 39ff57d9e2d0e147ca3ae0391af76403 190 Pfam PF03352 Methyladenine glycosylase 8 184 4.3E-78 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 YpsIP31758_4132 39ff57d9e2d0e147ca3ae0391af76403 190 Gene3D G3DSA:1.10.340.30 3 189 4.6E-85 T 12-10-2018 YpsIP31758_4132 39ff57d9e2d0e147ca3ae0391af76403 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 6.6E-83 T 12-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 YpsIP31758_0407 2e5fcde9aaaad084b728b9d231f16a36 921 Gene3D G3DSA:3.40.390.10 742 842 1.2E-5 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 YpsIP31758_0407 2e5fcde9aaaad084b728b9d231f16a36 921 Gene3D G3DSA:2.180.10.10 7 669 2.7E-235 T 12-10-2018 YpsIP31758_0407 2e5fcde9aaaad084b728b9d231f16a36 921 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 3.2E-4 T 12-10-2018 IPR006530 YD repeat YpsIP31758_0407 2e5fcde9aaaad084b728b9d231f16a36 921 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 1.4E-27 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 8.6E-185 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 Gene3D G3DSA:3.40.309.10 224 376 2.2E-160 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.79 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 Gene3D G3DSA:3.40.605.10 16 413 2.2E-160 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 PIRSF PIRSF000151 1 419 4.8E-171 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 SUPERFAMILY SSF53720 4 414 3.4E-111 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YpsIP31758_3149 23fd135e90142bf68af7c9c9fede3b94 419 Pfam PF00171 Aldehyde dehydrogenase family 6 282 1.8E-13 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 Gene3D G3DSA:3.20.20.80 1 477 5.2E-164 T 12-10-2018 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 4.8E-128 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 SUPERFAMILY SSF51445 2 471 6.28E-161 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_2729 6b9e5b343436f8719c734263ca2b7a01 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 SMART SM00382 28 238 2.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 SMART SM00382 285 479 3.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 Pfam PF00005 ABC transporter 24 163 2.2E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 Gene3D G3DSA:3.40.50.300 15 221 4.6E-36 T 12-10-2018 YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 Gene3D G3DSA:3.40.50.300 245 489 4.0E-49 T 12-10-2018 YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 Pfam PF00005 ABC transporter 276 429 1.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 SUPERFAMILY SSF52540 249 481 2.18E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2853 f7f86875726b1a618f74b167f1bc9751 496 SUPERFAMILY SSF52540 24 225 4.4E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 SUPERFAMILY SSF53822 63 316 5.1E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 Gene3D G3DSA:3.40.50.2300 67 308 3.5E-63 T 12-10-2018 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.1E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 12-10-2018 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 Gene3D G3DSA:3.40.50.2300 161 292 3.5E-63 T 12-10-2018 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 Gene3D G3DSA:1.10.260.40 1 61 7.2E-15 T 12-10-2018 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 SMART SM00354 5 75 3.6E-24 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 306 6.9E-33 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_4022 14f42f08bbb461a27a497a1535210987 331 SUPERFAMILY SSF47413 5 63 8.94E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0324 79914da96ac73f21e0d8bd8505d1182f 228 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 41 228 1.4E-81 T 12-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 YpsIP31758_0324 79914da96ac73f21e0d8bd8505d1182f 228 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 43 228 4.3E-63 T 12-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 YpsIP31758_3341 e024b149bb26f3771bcf266800ee09e6 159 SUPERFAMILY SSF55083 1 158 6.54E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YpsIP31758_3341 e024b149bb26f3771bcf266800ee09e6 159 Gene3D G3DSA:3.30.70.560 1 159 2.7E-63 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YpsIP31758_3341 e024b149bb26f3771bcf266800ee09e6 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.4E-46 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YpsIP31758_3341 e024b149bb26f3771bcf266800ee09e6 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YpsIP31758_3341 e024b149bb26f3771bcf266800ee09e6 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.2E-36 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YpsIP31758_3494 ed4d61019ed414eb638201c0a4843d29 233 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 1.0E-67 T 12-10-2018 IPR019305 Uncharacterised protein family Smp YpsIP31758_0636 a3c37ee00d4c8d9b33baa3756c0c1a2c 141 SUPERFAMILY SSF140566 7 130 9.55E-22 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 YpsIP31758_0636 a3c37ee00d4c8d9b33baa3756c0c1a2c 141 Pfam PF05130 FlgN protein 7 130 4.4E-14 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YpsIP31758_0636 a3c37ee00d4c8d9b33baa3756c0c1a2c 141 Gene3D G3DSA:1.20.58.300 4 132 1.3E-16 T 12-10-2018 YpsIP31758_0103 281eeb45ea6cb9f5ad9c36d112b83061 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.09 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 YpsIP31758_0103 281eeb45ea6cb9f5ad9c36d112b83061 79 Gene3D G3DSA:1.20.5.340 1 79 5.7E-33 T 12-10-2018 YpsIP31758_0103 281eeb45ea6cb9f5ad9c36d112b83061 79 Pfam PF06005 Cell division protein ZapB 1 78 4.2E-28 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 SUPERFAMILY SSF82866 410 606 1.15E-41 T 12-10-2018 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 48.696 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Gene3D G3DSA:3.30.1360.200 278 431 1.8E-49 T 12-10-2018 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Pfam PF02355 Protein export membrane protein 433 601 6.6E-16 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Gene3D G3DSA:3.30.70.3400 222 437 1.8E-49 T 12-10-2018 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.2E-37 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.1E-151 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 4.1E-84 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YpsIP31758_3121 0ba74f5232f7522de32089001bf317e0 615 Pfam PF07549 SecD/SecF GG Motif 120 140 5.1E-6 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YpsIP31758_0639 6f3192c5a4b8af01fc3eccb39ea9357e 121 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 119 4.5E-29 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YpsIP31758_0639 6f3192c5a4b8af01fc3eccb39ea9357e 121 PIRSF PIRSF002889 1 121 1.6E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YpsIP31758_0639 6f3192c5a4b8af01fc3eccb39ea9357e 121 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_0639 6f3192c5a4b8af01fc3eccb39ea9357e 121 Pfam PF00460 Flagella basal body rod protein 15 39 2.9E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_3301 6d4cb754275994ea8dede80990d14cf7 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 1.3E-47 T 12-10-2018 IPR022721 Protein of unknown function DUF3561 YpsIP31758_3301 6d4cb754275994ea8dede80990d14cf7 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 1.0E-54 T 12-10-2018 IPR022721 Protein of unknown function DUF3561 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 SMART SM01219 1 106 4.7E-56 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 Gene3D G3DSA:3.30.920.10 1 107 1.0E-41 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 1.3E-42 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 Pfam PF01491 Frataxin-like domain 1 103 2.2E-28 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 SUPERFAMILY SSF55387 1 105 2.96E-39 T 12-10-2018 YpsIP31758_0203 4f069fa24cf723c123fce22bf2c11b44 107 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 29.149 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 YpsIP31758_3486 15aa3bdb4df73834110726c17f80446f 207 Pfam PF13689 Domain of unknown function (DUF4154) 63 201 5.6E-33 T 12-10-2018 IPR025293 YfiR-like YpsIP31758_0031 4d98f618e344e6e2f6fed8265cd6dc3e 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 8.0E-53 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 YpsIP31758_0031 4d98f618e344e6e2f6fed8265cd6dc3e 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.6E-68 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 YpsIP31758_0031 4d98f618e344e6e2f6fed8265cd6dc3e 145 Gene3D G3DSA:3.50.80.10 1 145 6.1E-56 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YpsIP31758_0031 4d98f618e344e6e2f6fed8265cd6dc3e 145 SUPERFAMILY SSF69500 1 144 6.54E-56 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YpsIP31758_0031 4d98f618e344e6e2f6fed8265cd6dc3e 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.707 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 YpsIP31758_1587 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.50.10860 4 103 1.8E-31 T 12-10-2018 YpsIP31758_1587 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF51735 106 266 2.01E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1587 a14b275df4ef49dca64394f4047a5b54 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 4.2E-16 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YpsIP31758_1587 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.50.720 104 272 5.8E-36 T 12-10-2018 YpsIP31758_1587 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF53223 7 105 1.32E-26 T 12-10-2018 YpsIP31758_0681 8d0ae8ccc50a6a24982846f4d263f97d 690 SUPERFAMILY SSF56935 31 690 2.38E-119 T 12-10-2018 YpsIP31758_0681 8d0ae8ccc50a6a24982846f4d263f97d 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 150 6.8E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain YpsIP31758_0681 8d0ae8ccc50a6a24982846f4d263f97d 690 Pfam PF00593 TonB dependent receptor 251 688 7.0E-42 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YpsIP31758_0681 8d0ae8ccc50a6a24982846f4d263f97d 690 Gene3D G3DSA:2.40.170.20 39 690 5.9E-156 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YpsIP31758_0182 b18deb4cbc75b886cf6cd7abd91020df 360 Pfam PF00953 Glycosyl transferase family 4 70 227 5.2E-27 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 YpsIP31758_0182 b18deb4cbc75b886cf6cd7abd91020df 360 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 1.5E-164 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 YpsIP31758_0182 b18deb4cbc75b886cf6cd7abd91020df 360 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 29.142 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 YpsIP31758_0400 0dc480732a47a4358e2da933e8dfe827 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.2E-43 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YpsIP31758_0400 0dc480732a47a4358e2da933e8dfe827 162 PIRSF PIRSF018472 2 162 1.2E-57 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type YpsIP31758_0400 0dc480732a47a4358e2da933e8dfe827 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 7.5E-43 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YpsIP31758_1042 aa465b4bf5d0659069b05f7d8df2924f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.4E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1042 aa465b4bf5d0659069b05f7d8df2924f 217 Gene3D G3DSA:1.10.3720.10 1 217 2.6E-61 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1042 aa465b4bf5d0659069b05f7d8df2924f 217 SUPERFAMILY SSF161098 9 201 1.06E-47 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 SUPERFAMILY SSF51905 4 338 1.97E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.2E-14 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.2E-14 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-14 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.2E-14 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.5E-7 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-7 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.5E-7 T 12-10-2018 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 4.7E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YpsIP31758_1594 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Gene3D G3DSA:3.50.50.100 2 409 5.1E-117 T 12-10-2018 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:1.10.10.10 3 57 8.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF46785 5 67 2.04E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.5E-17 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 3.7E-14 T 12-10-2018 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:3.30.70.920 59 141 9.0E-36 T 12-10-2018 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 SMART SM00344 7 114 4.2E-42 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_1188 31ef0368f548049ae14cf45d4347fee5 211 SUPERFAMILY SSF48452 97 196 1.07E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1188 31ef0368f548049ae14cf45d4347fee5 211 PIRSF PIRSF006170 1 211 4.0E-57 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 YpsIP31758_1188 31ef0368f548049ae14cf45d4347fee5 211 Gene3D G3DSA:1.25.40.10 49 209 1.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1188 31ef0368f548049ae14cf45d4347fee5 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 210 2.6E-56 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 SUPERFAMILY SSF52540 300 651 5.49E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Gene3D G3DSA:3.40.50.300 409 516 1.1E-27 T 12-10-2018 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Gene3D G3DSA:3.40.50.300 517 640 8.6E-28 T 12-10-2018 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 649 52.135 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 7 651 3.9E-185 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Gene3D G3DSA:1.10.10.1020 1 114 5.3E-33 T 12-10-2018 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Gene3D G3DSA:3.40.50.300 115 373 5.5E-74 T 12-10-2018 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Pfam PF13604 AAA domain 175 337 3.9E-32 T 12-10-2018 YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 SUPERFAMILY SSF52540 6 338 5.77E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0992 d35bd336aea6689b07c3e62b2517f668 657 Pfam PF13538 UvrD-like helicase C-terminal domain 580 626 1.8E-15 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain YpsIP31758_1820 2ee67b904335fd0083de1a4006d72078 184 Pfam PF01292 Prokaryotic cytochrome b561 11 180 5.5E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YpsIP31758_1820 2ee67b904335fd0083de1a4006d72078 184 SUPERFAMILY SSF81342 5 180 4.87E-37 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-64 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.435 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 Gene3D G3DSA:3.90.45.10 2 169 9.2E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 PIRSF PIRSF004749 1 169 4.1E-56 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.9E-38 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.9E-38 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-38 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.9E-38 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-49 T 12-10-2018 IPR023635 Peptide deformylase YpsIP31758_3882 01b5a1b1b3cddddbbd146d33a14ec30a 170 SUPERFAMILY SSF56420 3 165 9.16E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 Gene3D G3DSA:3.20.20.70 1 231 1.3E-55 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 Pfam PF01791 DeoC/LacD family aldolase 54 205 4.8E-7 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 221 7.5E-46 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 SUPERFAMILY SSF51569 6 226 2.62E-52 T 12-10-2018 YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 PIRSF PIRSF001357 3 229 4.4E-62 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_0350 85ec8645a545e268b2a3a292159033e0 233 SMART SM01133 9 225 8.6E-52 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 Pfam PF02153 Prephenate dehydrogenase 138 344 4.0E-31 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 SUPERFAMILY SSF48179 241 366 8.73E-42 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 Gene3D G3DSA:1.20.59.10 1 80 2.4E-16 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 PIRSF PIRSF001499 1 373 1.8E-182 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 SUPERFAMILY SSF48600 4 88 4.4E-23 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 Gene3D G3DSA:3.40.50.720 81 246 1.1E-43 T 12-10-2018 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 SUPERFAMILY SSF51735 91 238 1.57E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 5.3E-44 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 Pfam PF01817 Chorismate mutase type II 9 86 3.1E-20 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 Gene3D G3DSA:1.10.3660.10 248 373 1.9E-51 T 12-10-2018 YpsIP31758_3219 5b14eb985cf2b4b9efb0a80cc7d8c7a2 373 SMART SM00830 9 89 1.1E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 12-10-2018 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.8E-150 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 12-10-2018 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 158 321 6.2E-130 T 12-10-2018 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 14 331 6.2E-130 T 12-10-2018 YpsIP31758_0398 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 190 263 6.2E-130 T 12-10-2018 YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 Gene3D G3DSA:3.30.1240.10 82 186 3.0E-81 T 12-10-2018 YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 2.6E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 SUPERFAMILY SSF56784 1 265 3.59E-69 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 Gene3D G3DSA:3.40.50.1000 5 256 3.0E-81 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 2.1E-63 T 12-10-2018 IPR000150 Cof family GO:0016787 YpsIP31758_0222 46239668e3caa889eba3d5ff4cce5f10 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.5E-61 T 12-10-2018 YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 PIRSF PIRSF006625 1 278 1.7E-136 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 Pfam PF04962 KduI/IolB family 69 272 1.1E-32 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 Gene3D G3DSA:2.60.120.10 10 264 5.9E-122 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.399 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 Gene3D G3DSA:2.60.120.520 30 144 5.9E-122 T 12-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 YpsIP31758_1694 6469be24751b8a99d48d55b03ec35188 278 SUPERFAMILY SSF51182 1 262 6.77E-108 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_1370 9cf17c377058cc9cbfd0b36b3abe84a4 179 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 22 145 1.9E-31 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_1370 9cf17c377058cc9cbfd0b36b3abe84a4 179 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 152 8.7E-44 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_1370 9cf17c377058cc9cbfd0b36b3abe84a4 179 Gene3D G3DSA:2.60.40.4150 36 150 1.2E-27 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_A0016 831fce32e40725daf2551d600a78ac3e 221 Pfam PF02517 CAAX protease self-immunity 124 212 7.4E-15 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 YpsIP31758_0715 466ece190ad6ed7d75d594d87361c15e 407 Gene3D G3DSA:1.20.1250.20 14 391 6.7E-27 T 12-10-2018 YpsIP31758_0715 466ece190ad6ed7d75d594d87361c15e 407 Pfam PF07690 Major Facilitator Superfamily 22 359 1.2E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0715 466ece190ad6ed7d75d594d87361c15e 407 SUPERFAMILY SSF103473 20 396 4.84E-31 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0296 6a94a448ad899464e78aad4fa2cc583f 575 PIRSF PIRSF000719 1 575 1.2E-304 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YpsIP31758_0296 6a94a448ad899464e78aad4fa2cc583f 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YpsIP31758_0296 6a94a448ad899464e78aad4fa2cc583f 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.925 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YpsIP31758_0296 6a94a448ad899464e78aad4fa2cc583f 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 1.1E-253 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YpsIP31758_4084 f93867e517d241665071b3986e76fde7 467 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_4084 f93867e517d241665071b3986e76fde7 467 PIRSF PIRSF006060 1 466 5.1E-73 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_4084 f93867e517d241665071b3986e76fde7 467 Pfam PF00324 Amino acid permease 16 451 5.2E-108 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_4084 f93867e517d241665071b3986e76fde7 467 Gene3D G3DSA:1.20.1740.10 7 464 1.5E-66 T 12-10-2018 YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 SUPERFAMILY SSF117143 93 222 7.59E-36 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 9.8E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.4E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.4E-49 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_2319 c776d8f9a6588da3d494b0edbf55fc92 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 2.5E-29 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YpsIP31758_0433 4ab295a4cb80c05ece8157dcdac214a5 158 Gene3D G3DSA:2.40.128.460 27 150 2.0E-33 T 12-10-2018 IPR038643 PliI superfamily YpsIP31758_0433 4ab295a4cb80c05ece8157dcdac214a5 158 SUPERFAMILY SSF69318 40 109 2.35E-7 T 12-10-2018 YpsIP31758_0433 4ab295a4cb80c05ece8157dcdac214a5 158 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 25 147 4.7E-43 T 12-10-2018 IPR031948 Periplasmic lysozyme inhibitor, I-type YpsIP31758_0335 ca0222c863d7bb7099fd816d653ed9cd 117 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 58 109 7.2E-19 T 12-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.8E-114 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 PIRSF PIRSF006621 1 321 6.2E-99 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.789 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:3.20.20.70 7 248 1.0E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 SUPERFAMILY SSF51395 11 319 6.04E-88 T 12-10-2018 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:1.10.1200.80 253 321 5.4E-7 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 YpsIP31758_0386 9b2817c09b05e6dcf24a42ce782f84b7 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 3.4E-134 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-25 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.329 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.10.430.100 61 149 3.4E-30 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55653 60 149 1.83E-25 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.5E-58 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3636 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.4E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal YpsIP31758_2095 b0b528400952d478e0dba821f8e5ba23 212 Gene3D G3DSA:3.40.1400.10 1 212 1.7E-97 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_2095 b0b528400952d478e0dba821f8e5ba23 212 SUPERFAMILY SSF89623 1 161 2.62E-35 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_2095 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.5E-23 T 12-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal YpsIP31758_2095 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 4.0E-29 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YpsIP31758_3348 d39f8b2716cefe66a21d64622d62275f 256 Pfam PF01061 ABC-2 type transporter 9 218 3.4E-37 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 YpsIP31758_3348 d39f8b2716cefe66a21d64622d62275f 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_3348 d39f8b2716cefe66a21d64622d62275f 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_3348 d39f8b2716cefe66a21d64622d62275f 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_3348 d39f8b2716cefe66a21d64622d62275f 256 PIRSF PIRSF006648 8 253 4.0E-24 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 SUPERFAMILY SSF51395 7 374 7.33E-99 T 12-10-2018 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 PIRSF PIRSF000138 2 380 3.7E-122 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-125 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.702 T 12-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 Gene3D G3DSA:3.20.20.70 3 380 1.9E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2409 6e2207647a187998e232e1f203e3f394 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 YpsIP31758_1728 7e0a8fe2246f804e353edc4e7cacd849 301 Pfam PF01522 Polysaccharide deacetylase 17 170 2.5E-13 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 YpsIP31758_1728 7e0a8fe2246f804e353edc4e7cacd849 301 SUPERFAMILY SSF88713 15 267 4.45E-28 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_1728 7e0a8fe2246f804e353edc4e7cacd849 301 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.602 T 12-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 YpsIP31758_1765 69dfedd9b7a878aa127c47313c149bfe 121 Pfam PF06945 Protein of unknown function (DUF1289) 54 99 9.3E-19 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 42.98 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 SUPERFAMILY SSF51338 6 404 1.68E-27 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 Pfam PF01979 Amidohydrolase family 64 402 1.2E-14 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 Gene3D G3DSA:2.30.40.10 15 402 4.9E-162 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 Gene3D G3DSA:3.20.20.140 67 365 4.9E-162 T 12-10-2018 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 404 1.7E-170 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 YpsIP31758_2113 cc7615a69c8ac7340272a70f25873f89 406 SUPERFAMILY SSF51556 66 366 1.43E-87 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 Gene3D G3DSA:3.20.20.70 361 654 6.5E-43 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 Gene3D G3DSA:2.20.150.10 33 128 1.6E-89 T 12-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 Gene3D G3DSA:3.40.1190.20 28 331 1.6E-89 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 344 651 2.3E-142 T 12-10-2018 IPR018659 Protein of unknown function DUF2090 YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 24 349 3.2E-125 T 12-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 Pfam PF00294 pfkB family carbohydrate kinase 26 341 8.2E-43 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 SUPERFAMILY SSF53613 23 348 1.31E-69 T 12-10-2018 IPR029056 Ribokinase-like YpsIP31758_2969 00d746968f0573257e3a5d83ed85ba65 654 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 293 306 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF51690 120 392 1.16E-85 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 9.6E-164 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 Gene3D G3DSA:3.20.140.10 1 401 2.1E-174 T 12-10-2018 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 1.0E-80 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF54675 3 138 1.21E-41 T 12-10-2018 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 PIRSF PIRSF000484 1 382 1.3E-57 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 YpsIP31758_2557 fe31bc454ace85e5481ec35d159c0863 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.606 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 YpsIP31758_2902 9e764e708f78d6f974a5f4046fa7e73f 148 Gene3D G3DSA:1.10.10.10 1 83 1.6E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2902 9e764e708f78d6f974a5f4046fa7e73f 148 Gene3D G3DSA:3.30.1490.190 85 143 3.1E-24 T 12-10-2018 YpsIP31758_2902 9e764e708f78d6f974a5f4046fa7e73f 148 SUPERFAMILY SSF46785 5 134 2.15E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_2902 9e764e708f78d6f974a5f4046fa7e73f 148 Pfam PF01475 Ferric uptake regulator family 11 130 3.0E-47 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YpsIP31758_2481 46f5670b00645a03d7285f122fc9e629 256 Gene3D G3DSA:3.40.50.720 5 256 3.8E-89 T 12-10-2018 YpsIP31758_2481 46f5670b00645a03d7285f122fc9e629 256 Pfam PF00899 ThiF family 13 245 4.4E-63 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YpsIP31758_2481 46f5670b00645a03d7285f122fc9e629 256 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 5.1E-123 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 YpsIP31758_2481 46f5670b00645a03d7285f122fc9e629 256 SUPERFAMILY SSF69572 4 248 3.92E-87 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 YpsIP31758_2049 6285204267e111193cebab88fec238f9 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.7E-17 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_2049 6285204267e111193cebab88fec238f9 194 SUPERFAMILY SSF55729 12 186 2.47E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_2049 6285204267e111193cebab88fec238f9 194 Gene3D G3DSA:3.40.630.30 10 191 2.8E-45 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Gene3D G3DSA:3.90.480.20 17 417 4.8E-90 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Gene3D G3DSA:3.30.413.10 141 348 4.8E-90 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 3.0E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.0E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.398 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 SUPERFAMILY SSF55124 346 424 5.4E-22 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 SUPERFAMILY SSF56014 150 344 2.75E-58 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 2.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 2.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 8.4E-290 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 SUPERFAMILY SSF56014 429 561 1.57E-34 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 558 0.0055 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 2.9E-46 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 Gene3D G3DSA:3.30.413.10 426 568 1.4E-35 T 12-10-2018 YpsIP31758_3310 e249e43fb2e7ea5eade4d16a99f25727 576 SUPERFAMILY SSF55124 13 142 3.27E-26 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YpsIP31758_0576 b578103c757ef249c15459e66129c705 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 1.6E-20 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_0576 b578103c757ef249c15459e66129c705 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.882 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 YpsIP31758_0576 b578103c757ef249c15459e66129c705 275 SUPERFAMILY SSF56300 16 273 3.38E-60 T 12-10-2018 YpsIP31758_0576 b578103c757ef249c15459e66129c705 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 5.0E-27 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 YpsIP31758_0576 b578103c757ef249c15459e66129c705 275 Gene3D G3DSA:3.60.21.10 4 272 2.7E-67 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_1528 bf0dc11bc3bf7fe90aab8edad11ab82b 291 SUPERFAMILY SSF161098 53 277 4.84E-44 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1528 bf0dc11bc3bf7fe90aab8edad11ab82b 291 Gene3D G3DSA:1.10.3720.10 49 289 1.1E-48 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1528 bf0dc11bc3bf7fe90aab8edad11ab82b 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 278 5.3E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1006 fdf5ba87c49bac44ab534c5ae1e0470c 110 Pfam PF04287 tRNA pseudouridine synthase C 7 104 8.3E-35 T 12-10-2018 IPR023376 YqcC-like domain YpsIP31758_1006 fdf5ba87c49bac44ab534c5ae1e0470c 110 Gene3D G3DSA:1.20.1440.40 1 106 3.2E-34 T 12-10-2018 IPR036814 YqcC-like superfamily YpsIP31758_1006 fdf5ba87c49bac44ab534c5ae1e0470c 110 SUPERFAMILY SSF158452 1 108 9.29E-39 T 12-10-2018 IPR036814 YqcC-like superfamily YpsIP31758_1006 fdf5ba87c49bac44ab534c5ae1e0470c 110 PIRSF PIRSF006257 1 109 1.4E-44 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 YpsIP31758_B0106 75ad9a3000eeadbfe0aca3917d769c6b 316 SUPERFAMILY SSF53067 155 308 6.48E-27 T 12-10-2018 YpsIP31758_B0106 75ad9a3000eeadbfe0aca3917d769c6b 316 Gene3D G3DSA:3.30.420.40 161 293 2.0E-27 T 12-10-2018 YpsIP31758_B0106 75ad9a3000eeadbfe0aca3917d769c6b 316 Pfam PF06406 StbA protein 21 307 3.3E-28 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA YpsIP31758_B0106 75ad9a3000eeadbfe0aca3917d769c6b 316 SUPERFAMILY SSF53067 2 140 1.6E-28 T 12-10-2018 YpsIP31758_B0106 75ad9a3000eeadbfe0aca3917d769c6b 316 Gene3D G3DSA:3.30.420.40 1 160 1.5E-42 T 12-10-2018 YpsIP31758_3051 ce002ef67da1b0ddb1458c081663eb6d 257 SUPERFAMILY SSF53448 1 257 4.8E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3051 ce002ef67da1b0ddb1458c081663eb6d 257 Gene3D G3DSA:3.90.550.10 1 257 3.9E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3051 ce002ef67da1b0ddb1458c081663eb6d 257 Pfam PF00483 Nucleotidyl transferase 2 211 5.7E-19 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_3051 ce002ef67da1b0ddb1458c081663eb6d 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 1.1E-146 T 12-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 YpsIP31758_3929 d37417b7762adabd3ddffd605e045dc1 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 10 67 5.8E-30 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 YpsIP31758_3929 d37417b7762adabd3ddffd605e045dc1 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 59 8.1E-20 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 YpsIP31758_0746 8a2c863fdf40e3defb3c397f92657c2a 288 Pfam PF13708 Domain of unknown function (DUF4942) 92 279 3.7E-57 T 12-10-2018 IPR031339 Domain of unknown function DUF4942 YpsIP31758_0711 7cf338c295d24695a6f46442e2220594 442 Gene3D G3DSA:3.50.50.60 1 421 8.9E-113 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0711 7cf338c295d24695a6f46442e2220594 442 SUPERFAMILY SSF51905 168 332 1.3E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0711 7cf338c295d24695a6f46442e2220594 442 SUPERFAMILY SSF51905 1 226 8.85E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0711 7cf338c295d24695a6f46442e2220594 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 333 8.4E-110 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 9 47 1.09E-12 T 12-10-2018 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 Gene3D G3DSA:3.30.65.10 52 97 2.5E-10 T 12-10-2018 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 Gene3D G3DSA:3.30.65.10 2 51 3.2E-9 T 12-10-2018 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 3.0E-15 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 102 140 7.2E-15 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 96 2.3E-17 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 58 96 9.52E-14 T 12-10-2018 YpsIP31758_3879 86571b6545747ef119ece2133ce8e9dc 179 SUPERFAMILY SSF57783 99 136 6.29E-5 T 12-10-2018 YpsIP31758_1285 14c7b250f99e084974f58fe1cfcaacb9 241 SUPERFAMILY SSF81606 5 216 1.18E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YpsIP31758_1285 14c7b250f99e084974f58fe1cfcaacb9 241 Gene3D G3DSA:3.60.40.10 3 237 3.5E-10 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YpsIP31758_2930 914463f032fa3f470567fae55cb3ae37 593 Gene3D G3DSA:2.60.40.1080 295 377 9.2E-7 T 12-10-2018 YpsIP31758_2930 914463f032fa3f470567fae55cb3ae37 593 Gene3D G3DSA:2.60.40.1080 378 460 7.3E-6 T 12-10-2018 YpsIP31758_2930 914463f032fa3f470567fae55cb3ae37 593 Pfam PF02368 Bacterial Ig-like domain (group 2) 299 352 1.2E-5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 YpsIP31758_2627 ae3d7ca3da9245f7c0f7adde5edb09d8 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 8.0E-12 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_2627 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Gene3D G3DSA:1.10.3720.10 2 233 3.5E-46 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2627 ae3d7ca3da9245f7c0f7adde5edb09d8 238 SUPERFAMILY SSF161098 7 216 1.44E-35 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2627 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 5.9E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1275 d9cbb0d87a41874849583ea47ba6194c 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 10 193 1.9E-105 T 12-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 YpsIP31758_1275 d9cbb0d87a41874849583ea47ba6194c 199 SUPERFAMILY SSF48695 16 195 5.06E-64 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily YpsIP31758_1275 d9cbb0d87a41874849583ea47ba6194c 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 2.7E-79 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal YpsIP31758_1275 d9cbb0d87a41874849583ea47ba6194c 199 PIRSF PIRSF000013 1 199 2.7E-109 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 YpsIP31758_1275 d9cbb0d87a41874849583ea47ba6194c 199 Gene3D G3DSA:1.10.3820.10 18 195 1.8E-40 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily YpsIP31758_2620 e2f91aed80db43ce7e7da9214ad041d4 339 PIRSF PIRSF017617 1 339 1.1E-130 T 12-10-2018 IPR023603 Threonine aldolase YpsIP31758_2620 e2f91aed80db43ce7e7da9214ad041d4 339 Pfam PF01212 Beta-eliminating lyase 4 284 4.5E-96 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 YpsIP31758_2620 e2f91aed80db43ce7e7da9214ad041d4 339 Gene3D G3DSA:3.40.640.10 1 245 1.4E-98 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_2620 e2f91aed80db43ce7e7da9214ad041d4 339 SUPERFAMILY SSF53383 3 335 3.59E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2620 e2f91aed80db43ce7e7da9214ad041d4 339 Gene3D G3DSA:3.90.1150.10 246 336 4.3E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 4.3E-89 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 8.8E-115 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 PIRSF PIRSF001359 13 359 6.1E-103 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 4.0E-190 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 SUPERFAMILY SSF51569 4 357 4.98E-132 T 12-10-2018 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 Gene3D G3DSA:3.20.20.70 2 359 6.1E-154 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0850 1890b72a315aa42297ab43aec0f2dcee 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YpsIP31758_0131 f7da03084cc66ab5f0c0a901f165c5cb 205 Gene3D G3DSA:3.30.1500.10 1 180 1.3E-78 T 12-10-2018 IPR036912 Haem-binding HasA superfamily YpsIP31758_0131 f7da03084cc66ab5f0c0a901f165c5cb 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 1.6E-84 T 12-10-2018 IPR010495 Haem-binding HasA YpsIP31758_0131 f7da03084cc66ab5f0c0a901f165c5cb 205 PIRSF PIRSF019876 1 205 5.5E-81 T 12-10-2018 IPR010495 Haem-binding HasA YpsIP31758_0131 f7da03084cc66ab5f0c0a901f165c5cb 205 SUPERFAMILY SSF54621 2 176 1.19E-64 T 12-10-2018 IPR036912 Haem-binding HasA superfamily YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 SUPERFAMILY SSF82649 248 336 7.32E-23 T 12-10-2018 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 327 1.9E-124 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.4E-8 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 Gene3D G3DSA:3.30.390.50 250 338 1.2E-27 T 12-10-2018 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.052 T 12-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 SUPERFAMILY SSF55681 4 247 2.15E-78 T 12-10-2018 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 Gene3D G3DSA:3.30.930.10 2 249 3.6E-87 T 12-10-2018 YpsIP31758_1733 6b419c8d1454ae70331c8721e3d35cfd 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 3.8E-18 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 YpsIP31758_2139 56c2e79f6292bb90131b109de0f5615b 469 Pfam PF04945 YHS domain 408 454 2.7E-18 T 12-10-2018 IPR007029 YHS domain YpsIP31758_2139 56c2e79f6292bb90131b109de0f5615b 469 Pfam PF10080 Predicted membrane protein (DUF2318) 297 400 1.7E-28 T 12-10-2018 IPR018758 Domain of unknown function DUF2318, membrane YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 2.6E-201 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.0E-116 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.856 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.1E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.1E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.1E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.1E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.1E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 SUPERFAMILY SSF48163 299 461 3.4E-44 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 Gene3D G3DSA:3.40.50.620 1 313 1.3E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 Gene3D G3DSA:1.10.10.350 367 470 5.8E-23 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YpsIP31758_1325 3c0706f46098a26db3f9ed52877d4c8d 471 SUPERFAMILY SSF52374 3 298 2.33E-113 T 12-10-2018 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 PRINTS PR00050 Cold shock protein signature 7 22 2.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 PRINTS PR00050 Cold shock protein signature 43 61 2.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 PRINTS PR00050 Cold shock protein signature 28 37 2.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 PIRSF PIRSF002599 1 70 1.3E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.4E-33 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 SUPERFAMILY SSF50249 3 69 9.94E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 SMART SM00357 6 70 4.4E-32 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_0375 71188580576ee71fa4b23336106c2ac7 70 Gene3D G3DSA:2.40.50.140 2 68 2.6E-30 T 12-10-2018 YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 234 248 - T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 Gene3D G3DSA:3.30.450.90 34 141 2.3E-25 T 12-10-2018 YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 Gene3D G3DSA:3.40.50.300 144 374 5.4E-88 T 12-10-2018 YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 46 371 1.6E-130 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 SMART SM00382 163 288 0.0088 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 SUPERFAMILY SSF52540 25 369 1.78E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0831 cb08cf4d1843be5c4e383e01d70456ae 374 Pfam PF00437 Type II/IV secretion system protein 96 312 1.0E-40 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_2947 01aaf7c8f5defc60f8b0ebfdc7931188 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-37 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YpsIP31758_2947 01aaf7c8f5defc60f8b0ebfdc7931188 105 SUPERFAMILY SSF81301 4 105 8.66E-37 T 12-10-2018 YpsIP31758_2947 01aaf7c8f5defc60f8b0ebfdc7931188 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.333 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YpsIP31758_2947 01aaf7c8f5defc60f8b0ebfdc7931188 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 6.1E-28 T 12-10-2018 YpsIP31758_2947 01aaf7c8f5defc60f8b0ebfdc7931188 105 Gene3D G3DSA:3.30.460.10 2 105 1.2E-35 T 12-10-2018 YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 Gene3D G3DSA:2.160.20.20 27 483 1.3E-41 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 SUPERFAMILY SSF51126 23 480 5.65E-46 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 602 1004 7.1E-68 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 373 509 1.1E-23 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 SUPERFAMILY SSF103515 696 1004 1.44E-38 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 Gene3D G3DSA:2.40.128.130 689 1004 7.1E-75 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 SMART SM00869 730 993 2.8E-31 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 Pfam PF03797 Autotransporter beta-domain 733 982 8.3E-38 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0499 9a9338fef8070a4f454005eb06b6dac9 1004 Pfam PF03212 Pertactin 363 479 3.4E-6 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 Gene3D G3DSA:3.40.190.10 46 324 1.9E-49 T 12-10-2018 YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 44 339 4.9E-134 T 12-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 43 248 1.8E-21 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 Gene3D G3DSA:3.40.190.10 121 216 1.9E-49 T 12-10-2018 YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 SMART SM00062 43 258 3.1E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 Gene3D G3DSA:1.10.8.450 252 295 1.9E-49 T 12-10-2018 YpsIP31758_3938 0534e7fec29a6822254bb8376b32590a 347 SUPERFAMILY SSF53850 53 325 1.68E-45 T 12-10-2018 YpsIP31758_1276 85b5712bd4f4b6a1a43165f53390bba6 198 SUPERFAMILY SSF55811 10 188 4.6E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_1276 85b5712bd4f4b6a1a43165f53390bba6 198 Pfam PF00293 NUDIX domain 45 169 1.8E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_1276 85b5712bd4f4b6a1a43165f53390bba6 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 185 5.0E-54 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 YpsIP31758_1276 85b5712bd4f4b6a1a43165f53390bba6 198 Gene3D G3DSA:3.90.79.10 2 188 3.7E-57 T 12-10-2018 YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF53697 94 276 5.09E-34 T 12-10-2018 YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01380 SIS domain 125 254 3.8E-22 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:3.40.50.10490 94 279 7.4E-37 T 12-10-2018 YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:1.10.10.10 1 79 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF46689 1 72 4.12E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1142 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 5.0E-25 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_3955 9e9d7a0391421067e1ca9fb395d5fcfd 436 SUPERFAMILY SSF51338 15 71 3.21E-6 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_3955 9e9d7a0391421067e1ca9fb395d5fcfd 436 Pfam PF07969 Amidohydrolase family 55 414 2.1E-53 T 12-10-2018 IPR013108 Amidohydrolase 3 YpsIP31758_3955 9e9d7a0391421067e1ca9fb395d5fcfd 436 Gene3D G3DSA:2.30.40.10 22 420 5.0E-180 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YpsIP31758_3955 9e9d7a0391421067e1ca9fb395d5fcfd 436 Gene3D G3DSA:3.20.20.140 67 374 5.0E-180 T 12-10-2018 YpsIP31758_3955 9e9d7a0391421067e1ca9fb395d5fcfd 436 SUPERFAMILY SSF51556 66 385 2.92E-106 T 12-10-2018 IPR032466 Metal-dependent hydrolase YpsIP31758_3189 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Gene3D G3DSA:1.10.3720.10 3 217 2.2E-47 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3189 68324c0d7f6e6f833a8445dfb0cbfa7a 222 SUPERFAMILY SSF161098 15 202 4.97E-40 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3189 68324c0d7f6e6f833a8445dfb0cbfa7a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.7E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_3189 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 209 2.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.3E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.30.1330.30 1 75 2.1E-29 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 6.4E-90 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.40.1280.10 77 243 5.1E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF55315 2 75 4.94E-20 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 SMART SM00967 4 80 1.1E-21 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 2.1E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.264 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YpsIP31758_3644 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF75217 69 243 5.62E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.9E-54 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:1.10.10.10 1 58 9.3E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF46785 3 73 9.34E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM00420 6 58 3.0E-26 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM01134 72 233 8.0E-72 T 12-10-2018 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF100950 74 234 1.07E-29 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:3.30.750.70 70 133 3.9E-10 T 12-10-2018 YpsIP31758_3997 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.4E-24 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 SUPERFAMILY SSF46785 25 82 1.18E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 Pfam PF14503 YhfZ C-terminal domain 76 299 2.1E-80 T 12-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 Gene3D G3DSA:3.40.190.10 167 256 1.5E-65 T 12-10-2018 YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 Gene3D G3DSA:1.10.10.10 19 77 2.0E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 SUPERFAMILY SSF53850 74 299 2.05E-82 T 12-10-2018 YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 Gene3D G3DSA:3.40.190.10 91 299 1.5E-65 T 12-10-2018 YpsIP31758_1156 68969616c361f8f80fb105ae7d9508eb 299 Pfam PF14502 Helix-turn-helix domain 25 70 2.9E-21 T 12-10-2018 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 Gene3D G3DSA:1.10.1220.10 1 40 3.1E-24 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 SUPERFAMILY SSF47598 1 35 7.45E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 175 42.058 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 Gene3D G3DSA:1.20.1380.10 62 175 6.6E-45 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.1E-24 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 SUPERFAMILY SSF82808 60 175 2.88E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 Pfam PF03925 SeqA protein C-terminal domain 65 173 6.6E-48 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 PIRSF PIRSF019401 1 68 7.4E-17 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 YpsIP31758_1098 210460e9e682cd1ae9c4a00257c51e8d 175 PIRSF PIRSF019401 45 175 1.6E-31 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 5.8E-7 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 5.8E-7 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 5.8E-7 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 5.8E-7 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 414 1.8E-71 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 Pfam PF07690 Major Facilitator Superfamily 16 405 6.1E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 Gene3D G3DSA:1.20.1720.10 13 247 5.4E-43 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 Gene3D G3DSA:1.20.1250.20 256 455 4.1E-13 T 12-10-2018 YpsIP31758_0009 e2d2403d3921f7137cc9a10bd7c5b9b1 474 SUPERFAMILY SSF103473 13 452 6.28E-58 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3615 fdfab9e0056fffa510c7a5872e7c4bb3 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 2.9E-38 T 12-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YpsIP31758_3615 fdfab9e0056fffa510c7a5872e7c4bb3 91 SUPERFAMILY SSF47413 4 72 6.75E-31 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_3615 fdfab9e0056fffa510c7a5872e7c4bb3 91 Gene3D G3DSA:1.10.260.40 3 71 2.3E-33 T 12-10-2018 YpsIP31758_2152 2395e13d66e7242d6e9be308a988b8ec 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YpsIP31758_2152 2395e13d66e7242d6e9be308a988b8ec 409 Gene3D G3DSA:1.20.1250.20 11 409 3.9E-77 T 12-10-2018 YpsIP31758_2152 2395e13d66e7242d6e9be308a988b8ec 409 SUPERFAMILY SSF103473 11 409 2.49E-78 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2152 2395e13d66e7242d6e9be308a988b8ec 409 Pfam PF07690 Major Facilitator Superfamily 23 305 2.3E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2983 6782b50e89ed373e5fc8fdc8daff4023 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 1.0E-60 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_2983 6782b50e89ed373e5fc8fdc8daff4023 159 Gene3D G3DSA:2.30.110.20 3 158 2.2E-53 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_2983 6782b50e89ed373e5fc8fdc8daff4023 159 SUPERFAMILY SSF141452 26 158 1.44E-34 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_2983 6782b50e89ed373e5fc8fdc8daff4023 159 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 3.5E-23 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1089 1227 1.9E-11 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 SMART SM01360 1294 1386 2.6E-22 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Pfam PF01835 MG2 domain 725 821 1.7E-15 T 12-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Gene3D G3DSA:2.60.40.3710 117 198 8.0E-6 T 12-10-2018 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Gene3D G3DSA:1.50.10.20 1493 1763 1.8E-9 T 12-10-2018 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 611 714 1.1E-23 T 12-10-2018 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 Pfam PF00207 Alpha-2-macroglobulin family 1295 1373 3.8E-11 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 SUPERFAMILY SSF48239 1497 1754 1.35E-15 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YpsIP31758_2979 6afa8c30c45c627566246332de02dd99 1998 SMART SM01359 1089 1228 8.2E-33 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YpsIP31758_0713 a62364edb011859a5431ca63182a7458 316 Pfam PF13523 Acetyltransferase (GNAT) domain 151 295 1.4E-49 T 12-10-2018 YpsIP31758_0713 a62364edb011859a5431ca63182a7458 316 SMART SM01006 147 194 6.8E-17 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain YpsIP31758_0713 a62364edb011859a5431ca63182a7458 316 Gene3D G3DSA:3.40.630.30 104 309 4.0E-60 T 12-10-2018 YpsIP31758_0713 a62364edb011859a5431ca63182a7458 316 SUPERFAMILY SSF55729 114 307 4.64E-55 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1945 e14c0f10b5f1592b22c441d586064e53 149 SUPERFAMILY SSF54637 15 137 4.84E-39 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_1945 e14c0f10b5f1592b22c441d586064e53 149 Pfam PF03061 Thioesterase superfamily 33 104 4.1E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 YpsIP31758_1945 e14c0f10b5f1592b22c441d586064e53 149 Gene3D G3DSA:3.10.129.10 1 145 3.8E-44 T 12-10-2018 YpsIP31758_1640 0adcdf17962f164bb9afec59cb12618e 954 Pfam PF10101 Predicted membrane protein (DUF2339) 173 931 4.8E-140 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane YpsIP31758_1640 0adcdf17962f164bb9afec59cb12618e 954 PIRSF PIRSF035905 1 941 0.0 T 12-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YpsIP31758_2129 32cccfc13fdee411e793e3c0a1b8b352 444 Gene3D G3DSA:3.90.550.10 69 286 1.0E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2129 32cccfc13fdee411e793e3c0a1b8b352 444 Pfam PF00535 Glycosyl transferase family 2 78 245 3.3E-36 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_2129 32cccfc13fdee411e793e3c0a1b8b352 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 1.8E-193 T 12-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 YpsIP31758_2129 32cccfc13fdee411e793e3c0a1b8b352 444 SUPERFAMILY SSF53448 68 344 6.25E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 Gene3D G3DSA:1.20.1510.10 12 208 4.5E-52 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 SUPERFAMILY SSF160240 212 287 5.1E-9 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 SUPERFAMILY SSF161111 10 209 2.75E-63 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 1.2E-96 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 Pfam PF01545 Cation efflux family 16 208 2.0E-54 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YpsIP31758_2863 49e2468dfb69696961e860879d3ad1b9 312 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 307 66.253 T 12-10-2018 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 YpsIP31758_0439 4481fac7783ea2f498583a38d842c6be 160 Gene3D G3DSA:3.40.930.10 1 157 8.7E-61 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_0439 4481fac7783ea2f498583a38d842c6be 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_0439 4481fac7783ea2f498583a38d842c6be 160 SUPERFAMILY SSF55804 8 154 1.44E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 YpsIP31758_0439 4481fac7783ea2f498583a38d842c6be 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 2.2E-36 T 12-10-2018 IPR002178 PTS EIIA type-2 domain YpsIP31758_0439 4481fac7783ea2f498583a38d842c6be 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 1.2E-59 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 YpsIP31758_3711 1cabcf4b0527aa46156c6adc470c65f5 116 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 14 116 2.7E-41 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 YpsIP31758_3711 1cabcf4b0527aa46156c6adc470c65f5 116 Pfam PF11190 Protein of unknown function (DUF2976) 29 115 2.4E-31 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.7E-80 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.828 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 SUPERFAMILY SSF53098 3 156 4.55E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.3E-65 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YpsIP31758_2032 f7080578c14816d77898f28a8a81e08d 173 Gene3D G3DSA:3.30.420.10 2 159 5.5E-54 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 1.1E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 1.8E-24 T 12-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 3.7E-30 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 3.7E-30 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 3.7E-30 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 3.7E-30 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 2.5E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 Gene3D G3DSA:2.30.330.10 48 138 1.3E-34 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_2300 eca084ec01fd9ac7e59214a479e251cb 138 SUPERFAMILY SSF101801 55 136 1.28E-26 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 SUPERFAMILY SSF56317 4 242 6.15E-60 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 SUPERFAMILY SSF52402 251 520 1.01E-77 T 12-10-2018 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 Pfam PF02540 NAD synthase 264 511 1.6E-71 T 12-10-2018 IPR022310 NAD/GMP synthase YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 12-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 4.7E-59 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 Gene3D G3DSA:3.40.50.620 261 539 3.2E-113 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 PIRSF PIRSF006630 243 539 2.2E-120 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 PIRSF PIRSF006630 2 247 1.8E-80 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 2.8E-25 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 28.247 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YpsIP31758_1154 6a0cdad2a846b14d1d6a2fb05648da4b 540 Gene3D G3DSA:3.60.110.10 1 255 3.2E-86 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 SMART SM00382 210 390 7.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.5E-44 T 12-10-2018 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.6E-213 T 12-10-2018 IPR004482 Mg chelatase-related protein YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 2.2E-89 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.5E-30 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 Gene3D G3DSA:3.40.50.300 191 498 2.8E-55 T 12-10-2018 YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 SUPERFAMILY SSF52540 189 502 2.93E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0153 e244dce846ba634eb24259dfc8956363 507 SUPERFAMILY SSF54211 10 169 4.93E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 5.0E-51 T 12-10-2018 YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 SMART SM00471 24 149 2.0E-7 T 12-10-2018 IPR003607 HD/PDEase domain YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 Pfam PF13023 HD domain 9 159 4.8E-18 T 12-10-2018 IPR006674 HD domain YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 SUPERFAMILY SSF109604 2 191 1.39E-44 T 12-10-2018 YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 Gene3D G3DSA:1.10.3210.10 1 196 4.8E-86 T 12-10-2018 YpsIP31758_1449 0e194c15d0515d6f0acc33661682eddb 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.484 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 YpsIP31758_2833 6d9fe02426db8b10474307f2414d747c 151 Gene3D G3DSA:3.90.1170.40 2 151 2.3E-54 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YpsIP31758_2833 6d9fe02426db8b10474307f2414d747c 151 SUPERFAMILY SSF54690 6 151 1.57E-53 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YpsIP31758_2833 6d9fe02426db8b10474307f2414d747c 151 Pfam PF02391 MoaE protein 13 122 1.1E-35 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.2E-54 T 12-10-2018 IPR000150 Cof family GO:0016787 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 SUPERFAMILY SSF56784 1 262 2.35E-62 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 12-10-2018 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 8.3E-35 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 Gene3D G3DSA:3.30.1240.10 82 185 9.0E-55 T 12-10-2018 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 66.254 T 12-10-2018 IPR023938 HMP-PP phosphatase GO:0016818 YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 Gene3D G3DSA:3.40.50.1000 5 258 9.0E-55 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3083 abe3780ed0177244ce15e6f151ae2227 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 5.8E-54 T 12-10-2018 YpsIP31758_0481 9a9984f12ca0b965d107fb8eb7f83c02 94 Pfam PF13997 YqjK-like protein 13 85 2.8E-30 T 12-10-2018 IPR025612 YqjK-like protein YpsIP31758_3786 14fa25b8b86a25e4eb175ed959516ee3 345 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 2.9E-105 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YpsIP31758_3786 14fa25b8b86a25e4eb175ed959516ee3 345 Pfam PF03741 Integral membrane protein TerC family 73 299 2.4E-42 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 YpsIP31758_2222 a1e799630342891e1acaaa6d86699021 399 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 17 185 1.5E-53 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.707 T 12-10-2018 IPR023071 Transcriptional regulator, SlyA YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 Pfam PF01047 MarR family 29 87 5.1E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 SMART SM00347 22 123 3.9E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 8.5E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 8.5E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 8.5E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.5E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 Gene3D G3DSA:1.10.10.10 1 143 4.5E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 SUPERFAMILY SSF46785 4 139 5.41E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1767 36ffde40e4aaaf2701b5fe41a53464bd 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site YpsIP31758_3173 1267f785595919894aa40a2536be1654 617 Gene3D G3DSA:3.40.50.11380 265 404 1.0E-126 T 12-10-2018 YpsIP31758_3173 1267f785595919894aa40a2536be1654 617 Gene3D G3DSA:3.40.50.2000 405 585 1.0E-126 T 12-10-2018 YpsIP31758_1483 0b7c39df2594129d2824d645f2d05721 272 SUPERFAMILY SSF53474 20 261 2.36E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1483 0b7c39df2594129d2824d645f2d05721 272 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 18 260 34.896 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 YpsIP31758_1483 0b7c39df2594129d2824d645f2d05721 272 Pfam PF12697 Alpha/beta hydrolase family 25 253 2.6E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_1483 0b7c39df2594129d2824d645f2d05721 272 Gene3D G3DSA:3.40.50.1820 14 261 1.2E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1483 0b7c39df2594129d2824d645f2d05721 272 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 22 259 2.1E-84 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 SUPERFAMILY SSF143800 1 80 4.32E-21 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.5E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 Pfam PF01197 Ribosomal protein L31 1 78 2.2E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.48 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.9E-13 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-13 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.9E-13 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_3069 4d1b569e45e8ac9bba0db94d70e5cf39 86 Gene3D G3DSA:2.30.170.50 1 83 3.4E-21 T 12-10-2018 YpsIP31758_3974 0cc64ad755dab935783dcf11369c4116 715 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 22 704 0.0 T 12-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YpsIP31758_3974 0cc64ad755dab935783dcf11369c4116 715 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 710 0.0 T 12-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PIRSF PIRSF002599 1 69 7.1E-26 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Gene3D G3DSA:2.40.50.140 1 67 8.1E-32 T 12-10-2018 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SUPERFAMILY SSF50249 3 68 9.14E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.6E-33 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SMART SM00357 5 69 6.9E-33 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 YpsIP31758_2958 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 12-10-2018 IPR019844 Cold-shock conserved site YpsIP31758_2427 915bbaa8159efb6274d58b2ac3a44305 15 Pfam PF08047 Histidine operon leader peptide 1 15 4.3E-9 T 12-10-2018 IPR012565 Histidine operon leader peptide GO:0000105 YpsIP31758_1269 240411d9b22267edefdc750ec4cbb0ba 92 Pfam PF09904 Winged helix-turn helix 3 90 2.2E-39 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 YpsIP31758_1269 240411d9b22267edefdc750ec4cbb0ba 92 Gene3D G3DSA:1.10.10.10 2 92 5.4E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1269 240411d9b22267edefdc750ec4cbb0ba 92 PIRSF PIRSF037266 1 92 1.6E-41 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 YpsIP31758_2667 d5701d2a8fd4da584bfa8ece55e68096 262 Gene3D G3DSA:3.40.50.300 5 254 6.5E-58 T 12-10-2018 YpsIP31758_2667 d5701d2a8fd4da584bfa8ece55e68096 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2667 d5701d2a8fd4da584bfa8ece55e68096 262 Pfam PF00005 ABC transporter 28 165 3.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2667 d5701d2a8fd4da584bfa8ece55e68096 262 SMART SM00382 30 215 8.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2667 d5701d2a8fd4da584bfa8ece55e68096 262 SUPERFAMILY SSF52540 5 229 9.82E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0384 54ce61f4cf462698308f6b6942b6af2c 158 SUPERFAMILY SSF160631 53 141 1.26E-5 T 12-10-2018 YpsIP31758_3082 8ea7203f0bf97a9feeda5ba653de1696 346 Gene3D G3DSA:3.40.50.1100 49 155 6.1E-69 T 12-10-2018 YpsIP31758_3082 8ea7203f0bf97a9feeda5ba653de1696 346 SUPERFAMILY SSF53686 21 334 3.67E-70 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_3082 8ea7203f0bf97a9feeda5ba653de1696 346 Gene3D G3DSA:3.40.50.1100 22 322 6.1E-69 T 12-10-2018 YpsIP31758_3082 8ea7203f0bf97a9feeda5ba653de1696 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 314 8.3E-45 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 PIRSF PIRSF001220 21 345 3.4E-93 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 PIRSF PIRSF500176 22 345 7.6E-82 T 12-10-2018 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 Gene3D G3DSA:3.40.50.40 232 345 7.2E-43 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 5.8E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 5.8E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 5.8E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 Pfam PF00710 Asparaginase, N-terminal 25 215 2.3E-61 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 Gene3D G3DSA:3.40.50.1170 23 231 1.0E-83 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 SUPERFAMILY SSF53774 23 344 1.13E-106 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 20 345 3.1E-148 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 YpsIP31758_2586 3ba2e5ac4cc52b72cc04774194e7650e 345 SMART SM00870 25 339 1.9E-139 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 SUPERFAMILY SSF53681 1 116 7.52E-36 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 Gene3D G3DSA:3.40.50.1860 4 224 3.9E-92 T 12-10-2018 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 6.0E-74 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.2E-58 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 SUPERFAMILY SSF53681 118 229 6.38E-34 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YpsIP31758_1412 c45e78212d50d2a219eb4964318f0491 230 Gene3D G3DSA:3.40.50.1860 104 215 3.9E-92 T 12-10-2018 YpsIP31758_1859 9d55da61f4454bef520f98d0a144af0f 307 SUPERFAMILY SSF103481 40 141 2.35E-13 T 12-10-2018 YpsIP31758_1859 9d55da61f4454bef520f98d0a144af0f 307 SUPERFAMILY SSF103481 187 289 1.01E-5 T 12-10-2018 YpsIP31758_1859 9d55da61f4454bef520f98d0a144af0f 307 Pfam PF00892 EamA-like transporter family 8 138 7.7E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1859 9d55da61f4454bef520f98d0a144af0f 307 Pfam PF00892 EamA-like transporter family 152 286 2.3E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2213 8bcb663eaea10f51ba80bd76aa02cb11 107 SUPERFAMILY SSF47598 4 53 8.58E-17 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_2213 8bcb663eaea10f51ba80bd76aa02cb11 107 Gene3D G3DSA:1.10.1220.10 1 107 3.8E-27 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_2213 8bcb663eaea10f51ba80bd76aa02cb11 107 Pfam PF03869 Arc-like DNA binding domain 7 55 1.2E-18 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 YpsIP31758_2467 dd5ed1ae3c4753c323c3f02fa44419d8 330 SUPERFAMILY SSF53822 25 329 3.34E-84 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2467 dd5ed1ae3c4753c323c3f02fa44419d8 330 Pfam PF13407 Periplasmic binding protein domain 27 298 1.3E-63 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_2467 dd5ed1ae3c4753c323c3f02fa44419d8 330 Gene3D G3DSA:3.40.50.2300 133 278 1.2E-122 T 12-10-2018 YpsIP31758_2467 dd5ed1ae3c4753c323c3f02fa44419d8 330 Gene3D G3DSA:3.40.50.2300 27 301 1.2E-122 T 12-10-2018 YpsIP31758_2660 cf3314fe03049e377b91a88291525301 223 SUPERFAMILY SSF161098 16 205 6.67E-42 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2660 cf3314fe03049e377b91a88291525301 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 215 2.1E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2660 cf3314fe03049e377b91a88291525301 223 Gene3D G3DSA:1.10.3720.10 8 221 1.6E-46 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.7E-35 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 6.9E-37 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 SUPERFAMILY SSF55486 4 151 4.64E-48 T 12-10-2018 YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 Gene3D G3DSA:3.40.390.30 1 155 1.2E-56 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 YpsIP31758_2917 6a190a68f62c5deffdb934d97ceadaef 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.599 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YpsIP31758_1943 7116b5b25f9908944ced481ff2151426 579 Gene3D G3DSA:3.30.750.24 437 563 1.1E-19 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_1943 7116b5b25f9908944ced481ff2151426 579 SUPERFAMILY SSF52091 445 537 3.73E-11 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_1943 7116b5b25f9908944ced481ff2151426 579 Pfam PF01740 STAS domain 445 531 5.1E-13 T 12-10-2018 IPR002645 STAS domain YpsIP31758_1943 7116b5b25f9908944ced481ff2151426 579 Pfam PF00916 Sulfate permease family 26 387 1.2E-86 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YpsIP31758_1707 7c4e3323dc934b4871d23cdfd8a8ceb6 227 Pfam PF01914 MarC family integral membrane protein 9 218 3.2E-62 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_1707 7c4e3323dc934b4871d23cdfd8a8ceb6 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 15 215 3.9E-37 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_2651 02c981d94be7babfc80a4e724370469d 201 SUPERFAMILY SSF48317 1 199 5.23E-39 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YpsIP31758_2651 02c981d94be7babfc80a4e724370469d 201 SMART SM00014 59 168 6.9E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_2651 02c981d94be7babfc80a4e724370469d 201 Gene3D G3DSA:1.20.144.10 93 189 1.1E-15 T 12-10-2018 YpsIP31758_2651 02c981d94be7babfc80a4e724370469d 201 Pfam PF01569 PAP2 superfamily 65 168 1.0E-11 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_1703 2123b924a10ff3801504b7bc7c0218e8 294 Gene3D G3DSA:1.10.3470.10 39 269 6.4E-9 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_1703 2123b924a10ff3801504b7bc7c0218e8 294 Pfam PF00950 ABC 3 transport family 10 265 3.0E-90 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 YpsIP31758_1703 2123b924a10ff3801504b7bc7c0218e8 294 SUPERFAMILY SSF81345 5 261 1.31E-38 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 Gene3D G3DSA:3.10.50.40 266 364 6.4E-31 T 12-10-2018 YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 SUPERFAMILY SSF54534 225 357 4.97E-23 T 12-10-2018 YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 SUPERFAMILY SSF109998 39 240 1.44E-33 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 Pfam PF13624 SurA N-terminal domain 1 166 3.8E-50 T 12-10-2018 YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 Gene3D G3DSA:1.10.4030.30 39 194 3.2E-15 T 12-10-2018 YpsIP31758_3088 e1193ad908765d1e8a2c156bb0548277 628 Pfam PF13145 PPIC-type PPIASE domain 249 370 2.1E-23 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 Pfam PF00849 RNA pseudouridylate synthase 102 249 2.2E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 Pfam PF01479 S4 domain 20 66 2.3E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 SUPERFAMILY SSF55174 19 70 2.21E-8 T 12-10-2018 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 4.1E-92 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 Gene3D G3DSA:3.10.290.10 7 76 4.1E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 SMART SM00363 20 79 2.7E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 SUPERFAMILY SSF55120 95 311 2.08E-63 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YpsIP31758_1570 409e62a7f44a068393e0e43c096ddb99 320 Gene3D G3DSA:3.30.2350.10 92 317 8.0E-84 T 12-10-2018 YpsIP31758_0196 bdfddabf9493a5d903da4658436c649f 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 2.9E-144 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 Pfam PF01202 Shikimate kinase 11 168 6.6E-48 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 44.932 T 12-10-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 Gene3D G3DSA:3.40.50.300 1 170 2.0E-52 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 SUPERFAMILY SSF52540 3 169 1.26E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 29 42 4.0E-22 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 95 112 4.0E-22 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 5 20 4.0E-22 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 57 65 4.0E-22 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 PRINTS PR01100 Shikimate kinase family signature 74 83 4.0E-22 T 12-10-2018 YpsIP31758_3143 412f2d574e51bd7944014b31b2c1e0d9 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.279 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 1 76 5.4E-29 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YpsIP31758_1579 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_2632 d2689e10e5e744cfb31fcf8c13d5508c 265 SUPERFAMILY SSF51735 113 219 6.96E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2632 d2689e10e5e744cfb31fcf8c13d5508c 265 Pfam PF03059 Nicotianamine synthase protein 8 229 4.8E-13 T 12-10-2018 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 YpsIP31758_2632 d2689e10e5e744cfb31fcf8c13d5508c 265 Gene3D G3DSA:3.40.50.150 11 249 5.5E-33 T 12-10-2018 YpsIP31758_2687 f1e0ead082142a01667add406fd18c4d 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 320 4.1E-37 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1791 d48d009c763939675b7315fd4d4a14a1 353 Pfam PF05128 Domain of unknown function (DUF697) 183 342 3.5E-57 T 12-10-2018 IPR021147 Protein of unknown function DUF697 YpsIP31758_1791 d48d009c763939675b7315fd4d4a14a1 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 39.368 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 YpsIP31758_1791 d48d009c763939675b7315fd4d4a14a1 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 9.5E-134 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 YpsIP31758_B0125 72044d08dbc87678182086cd78cd30a9 159 Gene3D G3DSA:1.10.530.10 21 158 1.2E-8 T 12-10-2018 YpsIP31758_B0125 72044d08dbc87678182086cd78cd30a9 159 SUPERFAMILY SSF53955 18 135 1.31E-25 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_B0125 72044d08dbc87678182086cd78cd30a9 159 Pfam PF01464 Transglycosylase SLT domain 23 124 2.6E-8 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_2823 4fad80d31b6b84db23e333021bca3b43 418 Gene3D G3DSA:1.20.1250.20 6 186 4.9E-13 T 12-10-2018 YpsIP31758_2823 4fad80d31b6b84db23e333021bca3b43 418 Pfam PF03825 Nucleoside H+ symporter 1 406 3.1E-159 T 12-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 YpsIP31758_2823 4fad80d31b6b84db23e333021bca3b43 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 7.0E-186 T 12-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 YpsIP31758_2823 4fad80d31b6b84db23e333021bca3b43 418 Gene3D G3DSA:1.20.1250.20 199 416 2.4E-31 T 12-10-2018 YpsIP31758_2823 4fad80d31b6b84db23e333021bca3b43 418 SUPERFAMILY SSF103473 9 405 2.09E-35 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0214 89d3aea2faf63f3ace63ceff76ad1b27 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 1.8E-53 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YpsIP31758_0214 89d3aea2faf63f3ace63ceff76ad1b27 316 Gene3D G3DSA:1.20.58.340 240 316 7.4E-26 T 12-10-2018 YpsIP31758_0214 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 12-10-2018 YpsIP31758_0214 89d3aea2faf63f3ace63ceff76ad1b27 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 316 1.2E-106 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 YpsIP31758_0214 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF143865 1 255 7.85E-37 T 12-10-2018 YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 Gene3D G3DSA:2.160.20.20 739 927 1.2E-33 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 811 1259 3.5E-79 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 SUPERFAMILY SSF51126 374 925 5.02E-34 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 Gene3D G3DSA:2.40.128.130 934 1259 2.3E-63 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 SMART SM00869 980 1244 8.8E-35 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 Pfam PF03797 Autotransporter beta-domain 983 1235 1.9E-34 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0695 9634e13005661ede737e625005bb7551 1259 SUPERFAMILY SSF103515 942 1259 2.62E-39 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_2209 6eed599dd6c4f1aef8fb8b5b443b4890 301 Pfam PF10543 ORF6N domain 28 109 4.1E-13 T 12-10-2018 IPR018873 KilA-N, DNA-binding domain YpsIP31758_1095 4aac94c35a23ce4b9571e4cd6fa08497 253 SUPERFAMILY SSF88713 1 252 2.89E-77 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_1095 4aac94c35a23ce4b9571e4cd6fa08497 253 Gene3D G3DSA:3.20.20.370 1 253 7.0E-69 T 12-10-2018 YpsIP31758_1095 4aac94c35a23ce4b9571e4cd6fa08497 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.618 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 YpsIP31758_1095 4aac94c35a23ce4b9571e4cd6fa08497 253 Pfam PF04794 YdjC-like protein 5 241 1.3E-62 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82866 812 1010 9.29E-42 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 555 650 1.55E-17 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1430 40 797 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 136 324 1.39E-21 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.2090.10 701 789 9.4E-293 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:1.20.1640.10 10 502 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82714 703 785 3.01E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.998 T 12-10-2018 IPR023931 Multidrug resistance protein MdtC YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1320 135 326 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:1.20.1640.10 503 1005 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1430 557 649 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 665 833 1.52E-5 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.2090.10 179 269 9.4E-293 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 Gene3D G3DSA:3.30.70.1440 650 847 9.4E-293 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-86 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82866 290 491 1.44E-46 T 12-10-2018 YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82714 183 265 1.14E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YpsIP31758_1213 7a6face40ed2d98b65a5a4d7cbb53e9c 1024 SUPERFAMILY SSF82693 40 135 1.62E-23 T 12-10-2018 YpsIP31758_0134 cc792e292733f7081370561792b42754 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 186 264 5.9E-19 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 YpsIP31758_0134 cc792e292733f7081370561792b42754 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 265 1.9E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal YpsIP31758_0134 cc792e292733f7081370561792b42754 267 SUPERFAMILY SSF74653 165 265 1.96E-22 T 12-10-2018 YpsIP31758_0134 cc792e292733f7081370561792b42754 267 Gene3D G3DSA:3.30.1150.10 111 265 7.1E-31 T 12-10-2018 YpsIP31758_2796 e02bf222df7feaa35aaaee2a981fea33 293 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 31 282 3.1E-77 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YpsIP31758_2796 e02bf222df7feaa35aaaee2a981fea33 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 281 1.4E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2796 e02bf222df7feaa35aaaee2a981fea33 293 Gene3D G3DSA:1.10.3720.10 79 282 3.9E-23 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2796 e02bf222df7feaa35aaaee2a981fea33 293 SUPERFAMILY SSF161098 84 274 6.54E-27 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 246 306 1.2E-19 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Gene3D G3DSA:3.30.460.10 51 216 4.8E-66 T 12-10-2018 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Gene3D G3DSA:1.10.3090.10 217 468 1.1E-103 T 12-10-2018 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 SUPERFAMILY SSF81301 56 215 1.06E-40 T 12-10-2018 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 29 482 38.635 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 SUPERFAMILY SSF81891 217 455 1.96E-50 T 12-10-2018 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF01743 Poly A polymerase head domain 85 219 1.2E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 54 483 1.7E-160 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YpsIP31758_3340 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF12626 Polymerase A arginine-rich C-terminus 364 483 5.7E-44 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain YpsIP31758_2170 941430b8a803ae83bb9f3d0d54c8bc19 275 SUPERFAMILY SSF161098 11 275 5.63E-69 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2170 941430b8a803ae83bb9f3d0d54c8bc19 275 Gene3D G3DSA:1.10.3720.10 8 267 3.3E-60 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2170 941430b8a803ae83bb9f3d0d54c8bc19 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 270 3.2E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 Pfam PF03466 LysR substrate binding domain 97 272 8.3E-28 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 SUPERFAMILY SSF53850 95 288 1.12E-29 T 12-10-2018 YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 SUPERFAMILY SSF46785 9 88 5.33E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 Gene3D G3DSA:1.10.10.10 8 91 1.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 2.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 Gene3D G3DSA:3.40.190.10 102 268 1.2E-61 T 12-10-2018 YpsIP31758_1452 554f58a63177963bc8a33ef5e3799523 309 Gene3D G3DSA:3.40.190.10 168 261 1.2E-61 T 12-10-2018 YpsIP31758_3680 b5f245c3a83c4b86c7a6bccf48cdbe34 119 SUPERFAMILY SSF54913 15 117 6.67E-36 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YpsIP31758_3680 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Pfam PF03091 CutA1 divalent ion tolerance protein 19 116 4.5E-34 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YpsIP31758_3680 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 13 119 36.414 T 12-10-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 YpsIP31758_3680 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Gene3D G3DSA:3.30.70.120 4 118 1.6E-40 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 Gene3D G3DSA:4.10.520.10 1 90 6.7E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-32 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 SMART SM00411 1 90 6.3E-44 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YpsIP31758_3846 be09dc7492f443309dfbef4f621ad7b5 91 SUPERFAMILY SSF47729 1 90 1.15E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YpsIP31758_2444 135d73e14e75d1ff37d00e2cb87cfee8 272 SMART SM00382 40 227 5.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2444 135d73e14e75d1ff37d00e2cb87cfee8 272 Pfam PF00005 ABC transporter 32 179 6.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2444 135d73e14e75d1ff37d00e2cb87cfee8 272 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2444 135d73e14e75d1ff37d00e2cb87cfee8 272 SUPERFAMILY SSF52540 14 241 5.21E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2444 135d73e14e75d1ff37d00e2cb87cfee8 272 Gene3D G3DSA:3.40.50.300 15 268 2.5E-62 T 12-10-2018 YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 Pfam PF00005 ABC transporter 280 433 2.3E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 Gene3D G3DSA:3.40.50.300 6 259 2.4E-52 T 12-10-2018 YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 Pfam PF00005 ABC transporter 30 180 1.9E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 SUPERFAMILY SSF52540 13 240 2.34E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 SMART SM00382 39 228 3.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 SMART SM00382 288 482 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 Gene3D G3DSA:3.40.50.300 274 500 3.8E-45 T 12-10-2018 YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 SUPERFAMILY SSF52540 279 485 4.47E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0912 29a2e1bf572cdfc3533ffae96a679d17 502 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2748 9e0e861df323fdf01fcf2d40606b0321 434 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 269 426 3.0E-40 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain YpsIP31758_2748 9e0e861df323fdf01fcf2d40606b0321 434 SUPERFAMILY SSF142764 5 431 4.18E-122 T 12-10-2018 YpsIP31758_2748 9e0e861df323fdf01fcf2d40606b0321 434 Gene3D G3DSA:3.40.980.20 257 433 2.0E-57 T 12-10-2018 YpsIP31758_2748 9e0e861df323fdf01fcf2d40606b0321 434 Pfam PF07005 Putative sugar-binding N-terminal domain 5 233 9.2E-65 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain YpsIP31758_2748 9e0e861df323fdf01fcf2d40606b0321 434 Gene3D G3DSA:3.40.50.10840 3 240 1.5E-78 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.2E-23 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF04055 Radical SAM superfamily 83 220 2.3E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 SMART SM00876 259 362 4.6E-32 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 Gene3D G3DSA:3.20.20.70 14 366 4.2E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 1.4E-165 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 YpsIP31758_3857 65efb76c51b851bfb9c158c2bf212ae9 376 SUPERFAMILY SSF102114 38 364 1.44E-54 T 12-10-2018 YpsIP31758_3856 450c3acfdfc4cd7fe59446550c29d09e 271 Gene3D G3DSA:3.20.20.70 1 267 1.9E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3856 450c3acfdfc4cd7fe59446550c29d09e 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 236 9.4E-105 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 YpsIP31758_3856 450c3acfdfc4cd7fe59446550c29d09e 271 SUPERFAMILY SSF110399 1 235 9.68E-84 T 12-10-2018 YpsIP31758_3856 450c3acfdfc4cd7fe59446550c29d09e 271 Hamap MF_00443 Thiazole synthase [thiG]. 1 263 42.89 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 SUPERFAMILY SSF52540 317 1328 4.1E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Gene3D G3DSA:3.40.50.300 291 574 9.2E-17 T 12-10-2018 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Gene3D G3DSA:3.40.50.300 999 1281 2.6E-13 T 12-10-2018 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Pfam PF13087 AAA domain 1291 1473 5.7E-11 T 12-10-2018 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 SUPERFAMILY SSF52980 1509 1621 6.7E-17 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Pfam PF13195 Protein of unknown function (DUF4011) 25 204 5.3E-43 T 12-10-2018 IPR025103 Protein of unknown function DUF4011 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Pfam PF11784 Protein of unknown function (DUF3320) 1682 1728 1.7E-15 T 12-10-2018 IPR021754 Protein of unknown function DUF3320 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Gene3D G3DSA:3.40.960.10 1518 1624 1.0E-17 T 12-10-2018 YpsIP31758_0808 114169db9e8282445f7f6e3935f6579c 1854 Gene3D G3DSA:3.40.50.300 1303 1482 1.7E-22 T 12-10-2018 YpsIP31758_0074 2aee6a3078775049b238d9f8d7382fe5 456 SUPERFAMILY SSF51261 287 454 3.66E-46 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_0074 2aee6a3078775049b238d9f8d7382fe5 456 Pfam PF01551 Peptidase family M23 357 450 8.2E-26 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_0074 2aee6a3078775049b238d9f8d7382fe5 456 Gene3D G3DSA:2.70.70.10 316 456 2.6E-38 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2310 c0efd76427305e39c928d348717719d8 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 325 1.1E-25 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0727 aeebc65c31b4dc84a0f25bbfaf077e23 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 512 3.2E-170 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_0727 aeebc65c31b4dc84a0f25bbfaf077e23 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 512 2.2E-203 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_2510 aeebc65c31b4dc84a0f25bbfaf077e23 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 512 3.2E-170 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_2510 aeebc65c31b4dc84a0f25bbfaf077e23 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 512 2.2E-203 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 SUPERFAMILY SSF116726 320 392 8.11E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Gene3D G3DSA:3.30.70.1450 323 396 1.2E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Pfam PF03600 Citrate transporter 430 607 1.4E-20 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 SUPERFAMILY SSF116726 232 289 9.94E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Pfam PF03600 Citrate transporter 16 197 7.2E-37 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Gene3D G3DSA:3.30.70.1450 229 306 5.9E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Pfam PF02080 TrkA-C domain 326 392 2.4E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_1447 b47fa0c2a7d6284b1ed9944382863ef9 610 Pfam PF02080 TrkA-C domain 231 297 1.6E-15 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YpsIP31758_0920 2ebb4c009de3b6708fc8fab998b43a70 419 Gene3D G3DSA:2.40.170.10 27 419 1.5E-112 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 YpsIP31758_0920 2ebb4c009de3b6708fc8fab998b43a70 419 SUPERFAMILY SSF56935 27 419 2.44E-109 T 12-10-2018 YpsIP31758_0920 2ebb4c009de3b6708fc8fab998b43a70 419 Hamap MF_01301 Maltoporin [lamB]. 2 419 44.712 T 12-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YpsIP31758_0920 2ebb4c009de3b6708fc8fab998b43a70 419 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 34 414 0.0 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 YpsIP31758_0920 2ebb4c009de3b6708fc8fab998b43a70 419 Pfam PF02264 LamB porin 29 419 2.8E-107 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 YpsIP31758_B0055 aa8b86be069457360c26d4d871396586 242 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 24 186 2.1E-19 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 Pfam PF01313 Bacterial export proteins, family 3 10 82 4.4E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 PIRSF PIRSF004669 5 92 3.4E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 10 88 5.4E-31 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 22 43 3.7E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 43 58 3.7E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_3813 80851e28afa3ba160c27c604fa60111f 93 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 58 80 3.7E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.90.1150.10 264 400 5.9E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 9.9E-168 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 PIRSF PIRSF001434 2 400 5.9E-114 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.40.640.10 7 263 1.4E-69 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 SUPERFAMILY SSF53383 28 398 1.21E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_0590 e6465be51941e8a0b2e2fd71386a75d4 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 397 2.4E-111 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 1.7E-17 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 1.7E-17 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 338 352 1.7E-17 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 1.7E-17 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 1.7E-17 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 SUPERFAMILY SSF48208 3 358 2.67E-99 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 Gene3D G3DSA:1.50.10.10 23 367 1.1E-129 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 YpsIP31758_4070 7f8e2267e14b323f47241f444583dff0 371 Pfam PF01270 Glycosyl hydrolases family 8 11 353 4.7E-86 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YpsIP31758_0911 ded61ba8f140786ca2305e8bfac732f5 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 334 4.7E-50 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2537 4407ed531de5f95b05bd00aa61082b3f 148 PIRSF PIRSF028777 1 139 8.6E-55 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 YpsIP31758_2537 4407ed531de5f95b05bd00aa61082b3f 148 Pfam PF03733 Inner membrane component domain 77 127 2.5E-18 T 12-10-2018 IPR005185 Inner membrane component domain YpsIP31758_2537 4407ed531de5f95b05bd00aa61082b3f 148 Pfam PF03733 Inner membrane component domain 4 53 2.5E-9 T 12-10-2018 IPR005185 Inner membrane component domain YpsIP31758_1469 f978daca186b447f1045c1a1cd4f5154 178 SUPERFAMILY SSF52540 2 167 5.63E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1469 f978daca186b447f1045c1a1cd4f5154 178 Gene3D G3DSA:3.40.50.300 2 170 1.1E-63 T 12-10-2018 YpsIP31758_1469 f978daca186b447f1045c1a1cd4f5154 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 166 1.4E-63 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 YpsIP31758_1469 f978daca186b447f1045c1a1cd4f5154 178 Pfam PF01202 Shikimate kinase 12 166 7.3E-10 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YpsIP31758_1734 62e3409499adde056fdda9db0f8e30b4 483 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 469 45.466 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 YpsIP31758_1734 62e3409499adde056fdda9db0f8e30b4 483 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 453 1.4E-154 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 232 5.0E-82 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 230 43.329 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 SUPERFAMILY SSF53448 11 231 3.47E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 Gene3D G3DSA:3.90.550.10 6 238 3.2E-74 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 230 8.4E-74 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 YpsIP31758_3299 5e24a6020e3e9a403e7a73b793fd2582 241 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 YpsIP31758_3063 3ea94065115fd7e6a8e6aebc948fd956 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.5E-23 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 Gene3D G3DSA:3.40.1160.10 1 258 2.7E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 251 43.884 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 Pfam PF00696 Amino acid kinase family 5 235 1.2E-39 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 1.8E-73 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 PIRSF PIRSF000728 1 258 4.0E-71 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_0128 c069bff5c66981490f5f952b7e1e298d 258 SUPERFAMILY SSF53633 1 256 6.28E-59 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_0266 c9919d09adb9b297aac7f2dcc329c28b 253 Pfam PF01048 Phosphorylase superfamily 21 241 1.4E-38 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YpsIP31758_0266 c9919d09adb9b297aac7f2dcc329c28b 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.7E-128 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 YpsIP31758_0266 c9919d09adb9b297aac7f2dcc329c28b 253 Gene3D G3DSA:3.40.50.1580 1 253 5.3E-81 T 12-10-2018 YpsIP31758_0266 c9919d09adb9b297aac7f2dcc329c28b 253 SUPERFAMILY SSF53167 6 250 1.44E-73 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YpsIP31758_0266 c9919d09adb9b297aac7f2dcc329c28b 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 YpsIP31758_2106 4095ffc7a2a29db50bd7fe606ceca080 268 Pfam PF00753 Metallo-beta-lactamase superfamily 36 200 1.2E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_2106 4095ffc7a2a29db50bd7fe606ceca080 268 Gene3D G3DSA:3.60.15.10 3 268 4.4E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_2106 4095ffc7a2a29db50bd7fe606ceca080 268 SUPERFAMILY SSF56281 28 265 4.59E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1110 1181 3.1E-15 T 12-10-2018 YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 Gene3D G3DSA:3.40.50.300 1 284 1.2E-46 T 12-10-2018 YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 SUPERFAMILY SSF52540 1 375 4.85E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 Gene3D G3DSA:3.40.50.300 998 1221 7.8E-28 T 12-10-2018 YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 Pfam PF13476 AAA domain 5 237 1.0E-26 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain YpsIP31758_3139 5c538f8695bdfc80f51c7cc1863c1525 1229 SUPERFAMILY SSF52540 1004 1199 1.42E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2874 15e5ab29f637dab71eec903f7b18e5ea 44 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.7E-15 T 12-10-2018 IPR012994 Membrane bound YbgT-like YpsIP31758_2874 15e5ab29f637dab71eec903f7b18e5ea 44 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 7.8E-20 T 12-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 PIRSF PIRSF000538 2 498 4.4E-76 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 SUPERFAMILY SSF53067 4 255 1.02E-56 T 12-10-2018 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 255 2.4E-64 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Gene3D G3DSA:3.30.420.40 249 498 6.7E-45 T 12-10-2018 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 SUPERFAMILY SSF53067 259 496 1.53E-40 T 12-10-2018 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 448 1.2E-16 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YpsIP31758_3270 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Gene3D G3DSA:3.30.420.40 1 247 6.7E-66 T 12-10-2018 YpsIP31758_3242 65d38d18903c4744b36abc47b992ca86 446 Gene3D G3DSA:1.20.1250.20 5 184 8.3E-11 T 12-10-2018 YpsIP31758_3242 65d38d18903c4744b36abc47b992ca86 446 Pfam PF07690 Major Facilitator Superfamily 12 286 8.5E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3242 65d38d18903c4744b36abc47b992ca86 446 SUPERFAMILY SSF103473 6 370 5.62E-39 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3242 65d38d18903c4744b36abc47b992ca86 446 Gene3D G3DSA:1.20.1250.20 200 380 7.8E-19 T 12-10-2018 YpsIP31758_B0017 1742375967b221580817c3dcf1445937 499 SUPERFAMILY SSF52540 88 490 2.74E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0017 1742375967b221580817c3dcf1445937 499 Pfam PF00437 Type II/IV secretion system protein 104 365 1.0E-42 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_B0017 1742375967b221580817c3dcf1445937 499 Gene3D G3DSA:3.30.450.90 70 201 1.7E-13 T 12-10-2018 YpsIP31758_B0017 1742375967b221580817c3dcf1445937 499 Gene3D G3DSA:3.40.50.300 203 492 1.1E-68 T 12-10-2018 YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 Gene3D G3DSA:3.20.20.70 51 334 3.5E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 8.2E-157 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 Pfam PF04055 Radical SAM superfamily 118 199 1.9E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 Pfam PF13353 4Fe-4S single cluster domain 111 182 3.8E-6 T 12-10-2018 YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 SUPERFAMILY SSF102114 102 324 8.5E-26 T 12-10-2018 YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 PIRSF PIRSF004911 3 342 2.0E-118 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YpsIP31758_3673 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 1.2E-132 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YpsIP31758_2171 e43f01e5e9606cd886a2f784949d6b24 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 3.1E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2171 e43f01e5e9606cd886a2f784949d6b24 280 Gene3D G3DSA:1.10.3720.10 40 279 6.6E-70 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2171 e43f01e5e9606cd886a2f784949d6b24 280 SUPERFAMILY SSF161098 45 269 1.31E-60 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4170 4774785d802f587c2ffd76645fd8e9df 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 308 5.1E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4170 4774785d802f587c2ffd76645fd8e9df 318 Gene3D G3DSA:1.10.3720.10 70 316 6.6E-33 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4170 4774785d802f587c2ffd76645fd8e9df 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.0E-94 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 YpsIP31758_4170 4774785d802f587c2ffd76645fd8e9df 318 SUPERFAMILY SSF161098 28 304 4.58E-34 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1139 075c11bfd5919e7989037b7ffb58a5b0 243 SUPERFAMILY SSF63892 4 242 2.62E-100 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YpsIP31758_1139 075c11bfd5919e7989037b7ffb58a5b0 243 Gene3D G3DSA:3.20.20.70 1 243 7.4E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1139 075c11bfd5919e7989037b7ffb58a5b0 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.8E-104 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YpsIP31758_1139 075c11bfd5919e7989037b7ffb58a5b0 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.8E-102 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YpsIP31758_1139 075c11bfd5919e7989037b7ffb58a5b0 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.324 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YpsIP31758_0230 8d6c31a4104b0f9724bb75abf31402f1 175 Gene3D G3DSA:3.40.1000.10 38 175 2.9E-8 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YpsIP31758_0230 8d6c31a4104b0f9724bb75abf31402f1 175 Pfam PF08786 DcrB 41 171 1.3E-26 T 12-10-2018 IPR014894 Protein DcrB YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 SMART SM00382 28 215 4.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 SUPERFAMILY SSF52540 3 236 1.03E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 Pfam PF00005 ABC transporter 19 167 3.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 Gene3D G3DSA:3.40.50.300 2 247 1.1E-76 T 12-10-2018 YpsIP31758_3187 41d8782fb50ec969473b798e995aa09c 248 PIRSF PIRSF039085 1 243 7.0E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 8.9E-44 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 SUPERFAMILY SSF55031 179 286 3.44E-27 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.0E-23 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 4.2E-177 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 Gene3D G3DSA:3.30.70.360 179 292 5.6E-125 T 12-10-2018 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 SUPERFAMILY SSF53187 5 373 2.16E-64 T 12-10-2018 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 Gene3D G3DSA:3.40.630.10 8 360 5.6E-125 T 12-10-2018 YpsIP31758_1255 4ee0b233ced554f0823a560cb5881e16 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.321 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 YpsIP31758_3546 41bd6a1c7adf5a82fd3548e07a07ae74 167 SUPERFAMILY SSF55729 9 167 7.72E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3546 41bd6a1c7adf5a82fd3548e07a07ae74 167 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 1.8E-13 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_3546 41bd6a1c7adf5a82fd3548e07a07ae74 167 Gene3D G3DSA:3.40.630.30 14 153 4.6E-25 T 12-10-2018 YpsIP31758_3006 1617fce5eb6fac00dc37570348bcff67 198 Gene3D G3DSA:1.20.120.1760 5 197 1.0E-22 T 12-10-2018 YpsIP31758_3006 1617fce5eb6fac00dc37570348bcff67 198 Pfam PF01066 CDP-alcohol phosphatidyltransferase 25 92 5.9E-10 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YpsIP31758_3194 90b6e687ed1182c0eca44b9f4dce847f 465 Pfam PF01425 Amidase 28 445 1.1E-95 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YpsIP31758_3194 90b6e687ed1182c0eca44b9f4dce847f 465 Gene3D G3DSA:3.90.1300.10 4 460 1.6E-125 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YpsIP31758_3194 90b6e687ed1182c0eca44b9f4dce847f 465 SUPERFAMILY SSF75304 5 454 4.45E-128 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YpsIP31758_3194 90b6e687ed1182c0eca44b9f4dce847f 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 9 459 8.2E-239 T 12-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 YpsIP31758_2327 d0d9e829897fb299a527342a81fd3e31 100 SUPERFAMILY SSF101498 3 92 4.97E-13 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily YpsIP31758_2327 d0d9e829897fb299a527342a81fd3e31 100 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 93 7.4E-19 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YpsIP31758_2327 d0d9e829897fb299a527342a81fd3e31 100 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 91 3.0E-10 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YpsIP31758_2855 6a2a39e2839df237f424b1713e3e6a60 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 8.5E-143 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 YpsIP31758_2855 6a2a39e2839df237f424b1713e3e6a60 338 SUPERFAMILY SSF51735 1 336 1.03E-98 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2855 6a2a39e2839df237f424b1713e3e6a60 338 Gene3D G3DSA:3.40.50.720 3 262 1.8E-140 T 12-10-2018 YpsIP31758_2855 6a2a39e2839df237f424b1713e3e6a60 338 Gene3D G3DSA:3.90.25.10 182 328 1.8E-140 T 12-10-2018 YpsIP31758_2855 6a2a39e2839df237f424b1713e3e6a60 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.7E-63 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_1083 470fdcf8ea9aac04a9a47724b04c7142 321 Hamap MF_01384 Urease accessory protein UreD [ureD]. 44 306 22.994 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YpsIP31758_1083 470fdcf8ea9aac04a9a47724b04c7142 321 Pfam PF01774 UreD urease accessory protein 88 295 1.5E-41 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YpsIP31758_0212 a28cc7c26b69dea1ae8422ab35610ed2 276 SUPERFAMILY SSF51621 3 197 3.77E-85 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_0212 a28cc7c26b69dea1ae8422ab35610ed2 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 2.9E-133 T 12-10-2018 IPR009215 TIM-barrel domain, IGPS-like YpsIP31758_0212 a28cc7c26b69dea1ae8422ab35610ed2 276 PIRSF PIRSF034452 1 276 1.2E-166 T 12-10-2018 IPR009215 TIM-barrel domain, IGPS-like YpsIP31758_0212 a28cc7c26b69dea1ae8422ab35610ed2 276 Gene3D G3DSA:3.20.20.70 1 252 2.0E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0248 327df5366907316181e687001ad629a7 233 Gene3D G3DSA:3.40.50.300 1 233 2.7E-64 T 12-10-2018 YpsIP31758_0248 327df5366907316181e687001ad629a7 233 Pfam PF00005 ABC transporter 17 161 1.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0248 327df5366907316181e687001ad629a7 233 SMART SM00382 26 212 9.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0248 327df5366907316181e687001ad629a7 233 SUPERFAMILY SSF52540 2 230 4.58E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0248 327df5366907316181e687001ad629a7 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0248 327df5366907316181e687001ad629a7 233 PIRSF PIRSF039137 1 233 7.2E-102 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 YpsIP31758_2789 3d72b39835e97df7239784c0b452d032 285 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 175 273 5.4E-7 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YpsIP31758_2789 3d72b39835e97df7239784c0b452d032 285 PIRSF PIRSF030125 7 285 3.0E-108 T 12-10-2018 IPR016946 Uncharacterised conserved protein UCP030125 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 9.4E-85 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:1.10.286.10 1 84 1.0E-39 T 12-10-2018 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:3.30.1130.10 85 220 3.2E-54 T 12-10-2018 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 SUPERFAMILY SSF55620 5 219 1.85E-74 T 12-10-2018 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.834 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YpsIP31758_2470 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Pfam PF01227 GTP cyclohydrolase I 38 216 3.7E-63 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 Gene3D G3DSA:3.40.50.880 1 191 1.4E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 SUPERFAMILY SSF52317 1 190 1.05E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.4E-37 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.9E-6 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.9E-6 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 2.0E-92 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.9E-14 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.9E-14 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.9E-14 T 12-10-2018 YpsIP31758_3948 e97c854b3e7fb7d7108d06238bd36a17 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 7.4E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 Gene3D G3DSA:2.60.120.10 149 253 5.1E-85 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 PIRSF PIRSF006232 2 288 1.4E-90 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 Pfam PF02678 Pirin 20 127 2.8E-34 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 Pfam PF05726 Pirin C-terminal cupin domain 182 284 3.8E-27 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 Gene3D G3DSA:2.60.120.10 17 279 5.1E-85 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_1995 1a077a9e2208c2bb84bd841cdad6cd2b 289 SUPERFAMILY SSF51182 4 286 4.16E-85 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 SUPERFAMILY SSF51905 10 323 4.53E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 1.7E-9 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 Gene3D G3DSA:3.30.9.10 87 319 4.1E-80 T 12-10-2018 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 1.5E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 Gene3D G3DSA:1.10.10.1100 421 493 3.3E-17 T 12-10-2018 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 540 7.1E-269 T 12-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 Gene3D G3DSA:3.50.50.60 11 367 4.1E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_0227 8f68fbe6821714c823abb7fa9aba45c5 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 YpsIP31758_1842 5ea3b3abedfecda4d8a72b66e62d232b 846 Pfam PF10139 Putative bacterial virulence factor 485 838 1.4E-68 T 12-10-2018 IPR017030 Virulence effector, SrfC YpsIP31758_1842 5ea3b3abedfecda4d8a72b66e62d232b 846 Pfam PF10139 Putative bacterial virulence factor 28 471 3.8E-134 T 12-10-2018 IPR017030 Virulence effector, SrfC YpsIP31758_1842 5ea3b3abedfecda4d8a72b66e62d232b 846 PIRSF PIRSF034586 4 470 4.3E-209 T 12-10-2018 IPR017030 Virulence effector, SrfC YpsIP31758_1842 5ea3b3abedfecda4d8a72b66e62d232b 846 PIRSF PIRSF034586 467 846 3.9E-146 T 12-10-2018 IPR017030 Virulence effector, SrfC YpsIP31758_1753 c3293d1fbfa2c49b24aa02f189d494d5 400 SUPERFAMILY SSF103473 7 392 1.83E-59 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1753 c3293d1fbfa2c49b24aa02f189d494d5 400 Pfam PF07690 Major Facilitator Superfamily 14 344 5.4E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1753 c3293d1fbfa2c49b24aa02f189d494d5 400 Gene3D G3DSA:1.20.1720.10 7 381 1.8E-82 T 12-10-2018 YpsIP31758_1753 c3293d1fbfa2c49b24aa02f189d494d5 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 383 4.7E-110 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 SMART SM00344 2 111 4.8E-38 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:1.10.10.10 3 54 5.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF46785 1 61 1.63E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:3.30.70.920 55 139 1.3E-24 T 12-10-2018 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 6.1E-16 T 12-10-2018 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF54909 62 151 1.27E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 YpsIP31758_3081 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.0E-21 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 Gene3D G3DSA:3.40.50.720 26 309 1.7E-93 T 12-10-2018 YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 SUPERFAMILY SSF51735 101 284 2.15E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 9.3E-57 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 Gene3D G3DSA:3.40.50.720 99 285 1.7E-93 T 12-10-2018 YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 311 1.8E-21 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 SUPERFAMILY SSF52283 3 132 4.16E-25 T 12-10-2018 YpsIP31758_2694 815d744975f98026f6ff4a0ee643ef48 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.7E-136 T 12-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.2E-58 T 12-10-2018 YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 SUPERFAMILY SSF51735 9 252 3.58E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_1693 d792232c47314edd81bfd7074e8e583a 253 Gene3D G3DSA:3.40.50.720 1 253 4.9E-83 T 12-10-2018 YpsIP31758_2957 5cadb835cb1bea3b904edb5a4e5220a2 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.17 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_2957 5cadb835cb1bea3b904edb5a4e5220a2 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 8.8E-25 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_2957 5cadb835cb1bea3b904edb5a4e5220a2 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 3.1E-38 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 126 225 2.0E-73 T 12-10-2018 YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 SUPERFAMILY SSF53850 15 264 6.73E-78 T 12-10-2018 YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 3.6E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 SMART SM00062 42 263 2.7E-86 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 40 260 2.0E-73 T 12-10-2018 YpsIP31758_2274 16e880f4004379e01e4965b42f418091 266 SMART SM00079 42 262 6.2E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:1.20.140.10 360 507 1.2E-100 T 12-10-2018 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 5.1E-17 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 1.3E-117 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 SUPERFAMILY SSF56645 119 355 7.72E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 SUPERFAMILY SSF47203 360 507 5.15E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:1.10.540.10 122 235 1.2E-100 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Gene3D G3DSA:2.40.110.10 236 359 1.2E-100 T 12-10-2018 YpsIP31758_3171 b45f91a12471253455f87a63f130949a 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.1E-10 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 Pfam PF00462 Glutaredoxin 4 69 1.6E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 SUPERFAMILY SSF52833 4 81 6.26E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.1E-50 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 YpsIP31758_2648 b36cbd6ee036dff2759a3de2cd9d447d 87 Gene3D G3DSA:3.40.30.10 3 85 4.4E-25 T 12-10-2018 YpsIP31758_2513 6043bd77483a12f9f36a27c2042c5fc6 82 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-18 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_2513 6043bd77483a12f9f36a27c2042c5fc6 82 SUPERFAMILY SSF47336 1 78 2.75E-11 T 12-10-2018 IPR036736 ACP-like superfamily YpsIP31758_2513 6043bd77483a12f9f36a27c2042c5fc6 82 Pfam PF00550 Phosphopantetheine attachment site 14 74 3.8E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 SUPERFAMILY SSF53697 131 290 7.12E-16 T 12-10-2018 YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 Pfam PF01418 Helix-turn-helix domain, rpiR family 40 108 4.5E-13 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 Gene3D G3DSA:3.40.50.10490 127 311 1.5E-29 T 12-10-2018 YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 SUPERFAMILY SSF46689 38 116 1.34E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 Pfam PF01380 SIS domain 161 284 4.6E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_3191 c76f88ea4ce372536813e88766119e66 314 Gene3D G3DSA:1.10.10.10 37 113 5.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3133 102f594e01e720a1c102e3b29bd3bf2a 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 8.0E-156 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YpsIP31758_3133 102f594e01e720a1c102e3b29bd3bf2a 439 Pfam PF05525 Branched-chain amino acid transport protein 7 426 2.0E-152 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 SMART SM00480 17 362 1.7E-165 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 248 366 1.6E-41 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 PIRSF PIRSF000804 1 366 6.0E-116 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.9E-44 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 125 244 3.62E-31 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 1 123 2.2E-42 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 8.1E-38 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 245 366 3.14E-37 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.1E-111 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 1 121 1.77E-26 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 124 247 4.0E-40 T 12-10-2018 YpsIP31758_4152 5162596b6f26793daca5a54167218025 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.1E-40 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 YpsIP31758_2548 790a5de70509f1cc91c5ebf4ed4683e0 192 SUPERFAMILY SSF159594 24 190 5.49E-27 T 12-10-2018 YpsIP31758_2548 790a5de70509f1cc91c5ebf4ed4683e0 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 32 185 4.0E-38 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.230.10 12 170 9.7E-56 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 287 3.3E-108 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF55060 174 288 7.91E-36 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 282 32.183 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF08544 GHMP kinases C terminal 216 267 1.0E-5 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.70.890 172 290 9.2E-27 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 PIRSF PIRSF010376 11 290 7.6E-85 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF54211 14 169 8.35E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YpsIP31758_2069 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF00288 GHMP kinases N terminal domain 98 155 8.8E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 YpsIP31758_1315 4e45ab29893a18a545e66a480a42821a 169 Gene3D G3DSA:2.70.70.10 9 169 2.4E-63 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_1315 4e45ab29893a18a545e66a480a42821a 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.6E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_1315 4e45ab29893a18a545e66a480a42821a 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_1315 4e45ab29893a18a545e66a480a42821a 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_1315 4e45ab29893a18a545e66a480a42821a 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.2E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YpsIP31758_3804 57086288f292ae1d29412d7fcd401580 334 Pfam PF01032 FecCD transport family 17 327 4.5E-94 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_3804 57086288f292ae1d29412d7fcd401580 334 Gene3D G3DSA:1.10.3470.10 4 334 9.8E-135 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3804 57086288f292ae1d29412d7fcd401580 334 SUPERFAMILY SSF81345 5 327 4.84E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_0845 65ea3f39724f7775a525d6de856e69ca 250 Gene3D G3DSA:3.30.2010.10 59 149 9.6E-9 T 12-10-2018 YpsIP31758_0845 65ea3f39724f7775a525d6de856e69ca 250 Pfam PF01435 Peptidase family M48 79 245 1.0E-24 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YpsIP31758_2634 65f8afb56bd24726f167404d82852b63 352 SUPERFAMILY SSF81345 14 347 8.89E-79 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_2634 65f8afb56bd24726f167404d82852b63 352 Pfam PF01032 FecCD transport family 33 346 2.7E-85 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_2634 65f8afb56bd24726f167404d82852b63 352 Gene3D G3DSA:1.10.3470.10 23 352 1.1E-90 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 SUPERFAMILY SSF52540 72 372 3.89E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Gene3D G3DSA:3.40.50.300 217 382 6.8E-104 T 12-10-2018 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Pfam PF01926 50S ribosome-binding GTPase 218 308 2.0E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.224 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 1.9E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.3E-34 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Pfam PF12631 MnmE helical domain 123 451 2.1E-60 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Gene3D G3DSA:3.30.1360.120 1 121 6.3E-38 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 SUPERFAMILY SSF116878 121 454 2.35E-51 T 12-10-2018 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 Gene3D G3DSA:1.20.120.430 122 454 6.8E-104 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 YpsIP31758_4158 25cfd801a89f9ae0092194cb8af28c0a 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 3.8E-100 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 YpsIP31758_3166 3ed7a33d73821b605f5850bb8dd9eb2a 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 9.9E-189 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YpsIP31758_3166 3ed7a33d73821b605f5850bb8dd9eb2a 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 4.3E-120 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YpsIP31758_3166 3ed7a33d73821b605f5850bb8dd9eb2a 447 Pfam PF11973 NQRA C-terminal domain 262 310 3.2E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 YpsIP31758_3166 3ed7a33d73821b605f5850bb8dd9eb2a 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.423 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YpsIP31758_4042 9c7c141de15d52b23ffd1ad84ad17a11 158 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 6 156 1.2E-33 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_3783 6c206ac874ce80773d91066e37e8f137 212 Pfam PF06551 Protein of unknown function (DUF1120) 30 98 6.8E-8 T 12-10-2018 IPR010546 Protein of unknown function DUF1120 YpsIP31758_0473 4d1ce3da71c4d575038b9568d6773d5b 196 Pfam PF13580 SIS domain 9 144 2.9E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_0473 4d1ce3da71c4d575038b9568d6773d5b 196 SUPERFAMILY SSF53697 3 191 4.45E-51 T 12-10-2018 YpsIP31758_0473 4d1ce3da71c4d575038b9568d6773d5b 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 59.568 T 12-10-2018 IPR023070 DnaA initiator-associating protein YpsIP31758_0473 4d1ce3da71c4d575038b9568d6773d5b 196 Gene3D G3DSA:3.40.50.10490 2 196 3.6E-69 T 12-10-2018 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 241 15.981 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.5E-77 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 3.0E-64 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.1E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.1E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.1E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.1E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YpsIP31758_0276 088eeecaf061baca2bb83d61e0321977 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site YpsIP31758_3076 f8879eebe2b4d86c1396ae4104f6b9ca 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.5E-59 T 12-10-2018 YpsIP31758_3076 f8879eebe2b4d86c1396ae4104f6b9ca 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.1E-101 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 YpsIP31758_3076 f8879eebe2b4d86c1396ae4104f6b9ca 286 SUPERFAMILY SSF54637 116 283 7.48E-62 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_3076 f8879eebe2b4d86c1396ae4104f6b9ca 286 SUPERFAMILY SSF54637 5 114 3.84E-42 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_3076 f8879eebe2b4d86c1396ae4104f6b9ca 286 Gene3D G3DSA:3.10.129.90 1 286 2.6E-117 T 12-10-2018 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:1.10.287.400 377 440 2.6E-33 T 12-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.9E-166 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 452 74.134 T 12-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF52402 3 186 7.68E-35 T 12-10-2018 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF69864 190 442 8.63E-81 T 12-10-2018 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.40.50.620 14 191 1.1E-119 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 Pfam PF00764 Arginosuccinate synthase 16 409 2.0E-58 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_2408 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.90.1260.10 74 367 1.1E-119 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YpsIP31758_2202 356df6ef739050c51609541e66edcbcd 225 Gene3D G3DSA:2.40.50.230 24 120 6.1E-10 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_3423 0cfa0f9d11e853e46f8efd4be4e4addd 451 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 444 5.3E-118 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_3423 0cfa0f9d11e853e46f8efd4be4e4addd 451 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 2.1E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_2633 2b3baeb9121bad015590484a910817b2 261 SUPERFAMILY SSF52540 4 223 3.33E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2633 2b3baeb9121bad015590484a910817b2 261 Gene3D G3DSA:3.40.50.300 3 239 8.7E-57 T 12-10-2018 YpsIP31758_2633 2b3baeb9121bad015590484a910817b2 261 SMART SM00382 28 209 9.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2633 2b3baeb9121bad015590484a910817b2 261 Pfam PF00005 ABC transporter 19 160 1.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2633 2b3baeb9121bad015590484a910817b2 261 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 6.5E-28 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 SUPERFAMILY SSF48179 273 482 4.08E-51 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 1.3E-69 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 Gene3D G3DSA:1.10.1040.10 272 483 9.8E-62 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 Gene3D G3DSA:3.40.50.720 3 265 6.2E-48 T 12-10-2018 YpsIP31758_0492 b063d37dcd19a3909419b3ef55bd2913 483 SUPERFAMILY SSF51735 2 263 2.44E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 Gene3D G3DSA:2.60.300.12 2 107 6.5E-37 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 SUPERFAMILY SSF89360 1 95 2.75E-33 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.6E-26 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.6E-58 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.5E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 YpsIP31758_1170 695d8974489163404315b1553d6966d8 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.793 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 1.4E-82 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.8E-63 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1389 4ae5871360756b7aec63822ecd95c6cc 245 Pfam PF01578 Cytochrome C assembly protein 29 184 1.6E-31 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YpsIP31758_1257 98335622b917a6cfbe6394f2c283d35d 157 SUPERFAMILY SSF48452 8 123 1.42E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1257 98335622b917a6cfbe6394f2c283d35d 157 Gene3D G3DSA:1.25.40.10 1 154 2.1E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1257 98335622b917a6cfbe6394f2c283d35d 157 Pfam PF12688 Tetratrico peptide repeat 35 153 7.9E-11 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.4E-26 T 12-10-2018 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 Gene3D G3DSA:1.10.3860.10 19 459 1.1E-109 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 SUPERFAMILY SSF118215 29 442 1.19E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_1685 1c20bff18d9cbe07f0368d0d9c25bfdb 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 1.0E-105 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 YpsIP31758_1746 601110429c122a1a49b0c55cff720884 140 SUPERFAMILY SSF82649 4 135 1.1E-45 T 12-10-2018 YpsIP31758_1746 601110429c122a1a49b0c55cff720884 140 Gene3D G3DSA:3.90.1010.10 2 140 6.4E-51 T 12-10-2018 YpsIP31758_1746 601110429c122a1a49b0c55cff720884 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 2.5E-43 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like YpsIP31758_1746 601110429c122a1a49b0c55cff720884 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 43.361 T 12-10-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:3.30.460.20 1 139 3.0E-43 T 12-10-2018 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 1.4E-63 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF144083 263 324 2.62E-13 T 12-10-2018 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 270 327 1.3E-11 T 12-10-2018 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 140 262 2.0E-41 T 12-10-2018 YpsIP31758_1799 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF143865 11 259 2.35E-52 T 12-10-2018 YpsIP31758_2873 7892eb8d4c08008aa6a2dec741cded82 95 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 15 92 6.7E-30 T 12-10-2018 IPR011846 Cyd operon protein YbgE YpsIP31758_2873 7892eb8d4c08008aa6a2dec741cded82 95 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 4 95 3.1E-41 T 12-10-2018 IPR011846 Cyd operon protein YbgE YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 4.9E-50 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 Pfam PF03061 Thioesterase superfamily 20 103 3.9E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 PIRSF PIRSF003230 1 133 1.8E-46 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 6.6E-42 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 Gene3D G3DSA:3.10.129.10 1 133 6.6E-41 T 12-10-2018 YpsIP31758_2872 c782f3af55a73339f2c85351710e716e 133 SUPERFAMILY SSF54637 4 132 5.9E-38 T 12-10-2018 IPR029069 HotDog domain superfamily YpsIP31758_2791 f505e0ea49fcb248fdc5d5f643daf8dd 278 SUPERFAMILY SSF52540 36 276 2.44E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2791 f505e0ea49fcb248fdc5d5f643daf8dd 278 Pfam PF00005 ABC transporter 53 207 1.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2791 f505e0ea49fcb248fdc5d5f643daf8dd 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 3.8E-112 T 12-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YpsIP31758_2791 f505e0ea49fcb248fdc5d5f643daf8dd 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 8.5E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YpsIP31758_2791 f505e0ea49fcb248fdc5d5f643daf8dd 278 Gene3D G3DSA:3.40.50.300 21 276 3.4E-55 T 12-10-2018 YpsIP31758_1074 ed8cf35b822f79f4696178affd4da200 268 SUPERFAMILY SSF52540 23 236 5.02E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1074 ed8cf35b822f79f4696178affd4da200 268 Pfam PF00005 ABC transporter 26 175 1.9E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_1074 ed8cf35b822f79f4696178affd4da200 268 Gene3D G3DSA:3.40.50.300 10 263 7.3E-51 T 12-10-2018 YpsIP31758_1074 ed8cf35b822f79f4696178affd4da200 268 SMART SM00382 35 223 4.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_B0047 631d4af908b1b3b345fc15c1b6d3a675 251 SUPERFAMILY SSF53271 188 233 2.84E-8 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_1568 26af517db3bed4f194511418d6f97cb2 95 Gene3D G3DSA:3.30.70.100 1 95 2.9E-29 T 12-10-2018 YpsIP31758_1568 26af517db3bed4f194511418d6f97cb2 95 SUPERFAMILY SSF54909 3 89 5.78E-28 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_1568 26af517db3bed4f194511418d6f97cb2 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 1.9E-17 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 Gene3D G3DSA:1.20.1530.20 3 386 6.8E-81 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 1.6E-88 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 Pfam PF02254 TrkA-N domain 403 513 1.9E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.4E-67 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.723 T 12-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 SUPERFAMILY SSF51735 402 529 3.36E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3930 deba4aa4ab9b3a983d7b21878d128d25 602 Gene3D G3DSA:3.40.50.720 400 561 8.8E-36 T 12-10-2018 YpsIP31758_1919 c05657f5b446b40adc9977c9af1cefa4 196 Gene3D G3DSA:3.40.50.10990 1 174 1.5E-75 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_1919 c05657f5b446b40adc9977c9af1cefa4 196 SUPERFAMILY SSF142695 3 173 3.66E-65 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_1919 c05657f5b446b40adc9977c9af1cefa4 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.897 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_1919 c05657f5b446b40adc9977c9af1cefa4 196 Pfam PF00925 GTP cyclohydrolase II 5 170 7.5E-66 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_1919 c05657f5b446b40adc9977c9af1cefa4 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.1E-92 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YpsIP31758_3734 9b121e48757e702907a10349db5ed743 530 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 140 528 2.6E-123 T 12-10-2018 IPR013359 Pilus formation type IVB, outer membrane PilN YpsIP31758_3734 9b121e48757e702907a10349db5ed743 530 ProDom PD128112 MEMBRANE OUTER PILUS LIPOPROTEIN BIOSYNTHESIS C TOXIN-COREGULATED TOXIN COFD TCPC 260 441 0.002 T 12-10-2018 YpsIP31758_3734 9b121e48757e702907a10349db5ed743 530 Pfam PF00263 Bacterial type II and III secretion system protein 360 494 3.3E-9 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_3734 9b121e48757e702907a10349db5ed743 530 Pfam PF07655 Secretin N-terminal domain 178 257 7.8E-15 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.7 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 Pfam PF00227 Proteasome subunit 2 165 2.0E-21 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 Gene3D G3DSA:3.60.20.10 1 173 5.3E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 PIRSF PIRSF039093 1 174 3.1E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 SUPERFAMILY SSF56235 2 172 7.73E-58 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YpsIP31758_0113 8c365328ba9c7eae960124b5ef956073 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-86 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YpsIP31758_1033 e3e928614fa0cf3ade7d752428848600 84 Gene3D G3DSA:2.30.30.400 8 84 2.7E-32 T 12-10-2018 IPR038626 Rof-like superfamily YpsIP31758_1033 e3e928614fa0cf3ade7d752428848600 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 81 2.0E-28 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination YpsIP31758_1033 e3e928614fa0cf3ade7d752428848600 84 SUPERFAMILY SSF101744 2 82 8.37E-30 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 378 1.0E-14 T 12-10-2018 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 Pfam PF04055 Radical SAM superfamily 10 172 2.3E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 Pfam PF13353 4Fe-4S single cluster domain 11 117 7.2E-5 T 12-10-2018 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 363 7.8E-150 T 12-10-2018 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 SUPERFAMILY SSF102114 9 327 8.5E-48 T 12-10-2018 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 Gene3D G3DSA:3.20.20.70 1 365 2.2E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1264 0ee8665277decf4dde01cbca5178adf7 391 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 264 344 1.4E-17 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain YpsIP31758_1553 3d81d4d468760c9bc1e1525d2ee5090a 854 Pfam PF00535 Glycosyl transferase family 2 253 435 8.1E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_1553 3d81d4d468760c9bc1e1525d2ee5090a 854 Gene3D G3DSA:3.90.550.10 247 475 1.9E-13 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_1553 3d81d4d468760c9bc1e1525d2ee5090a 854 SUPERFAMILY SSF53448 251 538 4.88E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_1553 3d81d4d468760c9bc1e1525d2ee5090a 854 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 73 752 51.215 T 12-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 YpsIP31758_1801 d094340ce3f23edf2deabc7249001622 334 SUPERFAMILY SSF53474 69 320 6.26E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1801 d094340ce3f23edf2deabc7249001622 334 Gene3D G3DSA:3.40.50.1820 47 319 2.0E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_1801 d094340ce3f23edf2deabc7249001622 334 Pfam PF07859 alpha/beta hydrolase fold 89 308 2.3E-21 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 Gene3D G3DSA:3.30.1330.50 1 162 1.0E-71 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 SUPERFAMILY SSF69765 1 158 2.49E-64 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 157 1.6E-69 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 158 36.623 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_3298 95852ba68db050b5e226a97988b45328 162 Pfam PF02542 YgbB family 1 156 4.0E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YpsIP31758_0572 06bfaeb3ed7aea6f00e9b63191e15060 228 Pfam PF06693 Protein of unknown function (DUF1190) 42 212 4.8E-55 T 12-10-2018 IPR009576 Biofilm formation YgiB YpsIP31758_0572 06bfaeb3ed7aea6f00e9b63191e15060 228 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 2 228 48.582 T 12-10-2018 IPR009576 Biofilm formation YgiB YpsIP31758_0562 a868bf7e31aff251648b6f4f3cb87080 435 Pfam PF01928 CYTH domain 4 196 3.7E-30 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YpsIP31758_0562 a868bf7e31aff251648b6f4f3cb87080 435 Gene3D G3DSA:2.40.320.10 1 200 1.1E-38 T 12-10-2018 YpsIP31758_0562 a868bf7e31aff251648b6f4f3cb87080 435 SUPERFAMILY SSF55154 1 218 1.8E-55 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 YpsIP31758_0562 a868bf7e31aff251648b6f4f3cb87080 435 SMART SM01118 2 202 9.8E-42 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YpsIP31758_0718 2f136ad944000b27c0d1460133557b50 452 Gene3D G3DSA:2.60.40.2180 28 127 1.2E-17 T 12-10-2018 YpsIP31758_0718 2f136ad944000b27c0d1460133557b50 452 Pfam PF10503 Esterase PHB depolymerase 274 335 3.9E-5 T 12-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 YpsIP31758_0718 2f136ad944000b27c0d1460133557b50 452 Gene3D G3DSA:3.40.50.1820 182 452 7.5E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0718 2f136ad944000b27c0d1460133557b50 452 SUPERFAMILY SSF53474 186 386 8.6E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 Gene3D G3DSA:2.30.210.20 2 61 3.1E-26 T 12-10-2018 YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 2.0E-73 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 SUPERFAMILY SSF55729 3 229 1.17E-94 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.06 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 1.6E-76 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YpsIP31758_2603 0c94b5e4dcb278b8f0ce4b68841cab31 236 Gene3D G3DSA:3.40.630.70 62 235 9.9E-70 T 12-10-2018 YpsIP31758_3380 efcfaea5a6bbb755ad34cb82906497c3 174 Pfam PF05258 Protein of unknown function (DUF721) 26 98 1.2E-13 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 YpsIP31758_3376 f2ed23e8ed18bc2d47cc3826de5af644 68 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.2E-24 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YpsIP31758_3376 f2ed23e8ed18bc2d47cc3826de5af644 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.968 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YpsIP31758_3376 f2ed23e8ed18bc2d47cc3826de5af644 68 Gene3D G3DSA:3.30.50.10 2 65 6.0E-26 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 YpsIP31758_3376 f2ed23e8ed18bc2d47cc3826de5af644 68 SUPERFAMILY SSF57716 5 63 1.71E-21 T 12-10-2018 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 4.0E-69 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.577 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.40.50.1360 7 207 3.6E-75 T 12-10-2018 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF75445 127 198 2.49E-23 T 12-10-2018 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.30.70.260 125 196 3.6E-75 T 12-10-2018 YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF100950 1 146 2.56E-48 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_0855 39e4491dab8dbdcaafabf48cef276706 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.1E-57 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 YpsIP31758_3689 140c6c84ccbcf13812fbc6cddab67b2f 301 SUPERFAMILY SSF160940 3 279 7.85E-129 T 12-10-2018 YpsIP31758_3689 140c6c84ccbcf13812fbc6cddab67b2f 301 Gene3D G3DSA:3.30.70.1270 4 271 1.0E-109 T 12-10-2018 YpsIP31758_3689 140c6c84ccbcf13812fbc6cddab67b2f 301 Gene3D G3DSA:1.10.3530.10 30 208 1.0E-109 T 12-10-2018 IPR023136 Api92-like domain superfamily YpsIP31758_3689 140c6c84ccbcf13812fbc6cddab67b2f 301 Pfam PF06924 Protein of unknown function (DUF1281) 9 141 1.6E-56 T 12-10-2018 IPR009694 Protein of unknown function DUF1281 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 SUPERFAMILY SSF51726 2 353 2.27E-121 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 Gene3D G3DSA:3.20.20.210 1 354 3.3E-162 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.418 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 3.6E-136 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 4.1E-142 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YpsIP31758_3849 2023d07b54a989c8e7ac4d4abea7976a 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YpsIP31758_0188 1f59408a9403177e8ceb72eafe637d8a 245 SUPERFAMILY SSF55729 43 238 2.4E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_0188 1f59408a9403177e8ceb72eafe637d8a 245 Gene3D G3DSA:3.40.630.30 1 244 1.4E-68 T 12-10-2018 YpsIP31758_0188 1f59408a9403177e8ceb72eafe637d8a 245 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 244 45.696 T 12-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 YpsIP31758_0188 1f59408a9403177e8ceb72eafe637d8a 245 Pfam PF00583 Acetyltransferase (GNAT) family 150 230 1.8E-13 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_0188 1f59408a9403177e8ceb72eafe637d8a 245 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 244 1.3E-109 T 12-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 YpsIP31758_1656 13f29385582a9f010a067b631c8915da 418 Pfam PF01734 Patatin-like phospholipase 86 271 3.2E-24 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YpsIP31758_1656 13f29385582a9f010a067b631c8915da 418 SUPERFAMILY SSF52151 86 271 2.09E-32 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YpsIP31758_1656 13f29385582a9f010a067b631c8915da 418 Gene3D G3DSA:3.40.1090.10 70 195 1.2E-12 T 12-10-2018 YpsIP31758_1294 6ada2478dce063f4fb88feb07d9a73ad 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 9 223 38.105 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 YpsIP31758_1294 6ada2478dce063f4fb88feb07d9a73ad 233 Gene3D G3DSA:3.20.20.70 2 227 8.4E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1294 6ada2478dce063f4fb88feb07d9a73ad 233 SUPERFAMILY SSF51366 11 222 4.94E-53 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YpsIP31758_1294 6ada2478dce063f4fb88feb07d9a73ad 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 33 224 3.9E-81 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 YpsIP31758_0768 8a341509e7f4a80056008de3c2f1db17 208 Pfam PF11726 Inovirus Gp2 18 206 3.4E-48 T 12-10-2018 YpsIP31758_1565 e216beddb440e18e22a50cb8662f847c 84 Pfam PF13991 BssS protein family 11 81 2.7E-38 T 12-10-2018 IPR025730 Biofilm regulator BssS YpsIP31758_1565 e216beddb440e18e22a50cb8662f847c 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 2.0E-43 T 12-10-2018 IPR025730 Biofilm regulator BssS YpsIP31758_1351 9c38c7323e040341fb04a479c332af99 364 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 352 5.2E-121 T 12-10-2018 IPR011757 Lytic transglycosylase MltB YpsIP31758_1351 9c38c7323e040341fb04a479c332af99 364 Gene3D G3DSA:1.10.8.350 60 232 4.7E-116 T 12-10-2018 YpsIP31758_1351 9c38c7323e040341fb04a479c332af99 364 SUPERFAMILY SSF53955 55 351 5.55E-94 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_1351 9c38c7323e040341fb04a479c332af99 364 Pfam PF13406 Transglycosylase SLT domain 55 349 1.3E-91 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 YpsIP31758_1351 9c38c7323e040341fb04a479c332af99 364 Gene3D G3DSA:1.10.530.10 97 352 4.7E-116 T 12-10-2018 YpsIP31758_1081 cdd3c0475e477a56af93f343a9fbfdc8 228 Gene3D G3DSA:1.10.4190.10 2 204 3.0E-42 T 12-10-2018 IPR038277 UreF domain superfamily YpsIP31758_1081 cdd3c0475e477a56af93f343a9fbfdc8 228 Pfam PF01730 UreF 37 185 8.4E-23 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YpsIP31758_1081 cdd3c0475e477a56af93f343a9fbfdc8 228 PIRSF PIRSF009467 2 228 1.3E-59 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YpsIP31758_1081 cdd3c0475e477a56af93f343a9fbfdc8 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 22.069 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 659 833 2.7E-29 T 12-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 30 51 1.6E-28 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 89 105 1.6E-28 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 189 207 1.6E-28 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 297 315 1.6E-28 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 883 1029 3.7E-55 T 12-10-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 33 316 1.6E-100 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YpsIP31758_0414 88be786457dcf2a911bf738f7663283f 1505 SUPERFAMILY SSF69318 406 687 4.71E-19 T 12-10-2018 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 Gene3D G3DSA:3.40.50.720 8 281 8.2E-105 T 12-10-2018 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.7E-42 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 SUPERFAMILY SSF48179 283 487 9.18E-66 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 8.4E-22 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 8.4E-22 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 8.4E-22 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 8.4E-22 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 SUPERFAMILY SSF51735 3 282 1.18E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 Gene3D G3DSA:1.10.1040.10 282 490 1.6E-78 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_2702 ba3a9a738b8a05640d5a2e657df3054a 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 1.2E-94 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YpsIP31758_1735 dadf1e4310a03f974d1cf604e27e27b2 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.2E-169 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_1735 dadf1e4310a03f974d1cf604e27e27b2 348 SUPERFAMILY SSF51569 7 347 1.28E-131 T 12-10-2018 YpsIP31758_1735 dadf1e4310a03f974d1cf604e27e27b2 348 Gene3D G3DSA:3.20.20.70 1 348 1.0E-153 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1735 dadf1e4310a03f974d1cf604e27e27b2 348 PIRSF PIRSF001361 1 348 7.3E-156 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_1735 dadf1e4310a03f974d1cf604e27e27b2 348 Pfam PF00793 DAHP synthetase I family 41 337 6.1E-102 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 1.6E-135 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 Gene3D G3DSA:2.130.10.10 21 392 8.6E-96 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 Pfam PF13360 PQQ-like domain 78 320 5.8E-53 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.914 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 201 232 24.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 65 96 0.13 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 156 187 2.8E-4 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 115 147 0.02 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 290 321 770.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 252 283 7.7E-6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SMART SM00564 330 362 2.3 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YpsIP31758_1189 9c3573b92e47bbe9456af71479a78d71 393 SUPERFAMILY SSF50998 24 385 5.83E-78 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YpsIP31758_4110 e8325d826aa84a781c80624412cd4717 409 Pfam PF07690 Major Facilitator Superfamily 25 364 1.9E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_4110 e8325d826aa84a781c80624412cd4717 409 Gene3D G3DSA:1.20.1720.10 19 399 4.6E-64 T 12-10-2018 YpsIP31758_4110 e8325d826aa84a781c80624412cd4717 409 SUPERFAMILY SSF103473 7 401 1.44E-50 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2771 931fc4065e182ec1929e0a8980ba1c14 85 Gene3D G3DSA:3.10.20.30 1 85 7.5E-19 T 12-10-2018 IPR012675 Beta-grasp domain superfamily YpsIP31758_2771 931fc4065e182ec1929e0a8980ba1c14 85 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 77 1.1E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YpsIP31758_2771 931fc4065e182ec1929e0a8980ba1c14 85 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YpsIP31758_2771 931fc4065e182ec1929e0a8980ba1c14 85 SUPERFAMILY SSF54292 4 85 2.36E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:1.10.1390.10 511 548 2.8E-20 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 11 510 3.4E-241 T 12-10-2018 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 SUPERFAMILY SSF53697 5 547 1.36E-227 T 12-10-2018 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.8E-257 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.6E-55 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 98 291 3.4E-241 T 12-10-2018 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.913 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0302 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YpsIP31758_0985 4ebb10d7718c05d751cb0cce9ab05faf 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 33 54 1.1E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0985 4ebb10d7718c05d751cb0cce9ab05faf 189 SUPERFAMILY SSF54523 37 178 1.26E-12 T 12-10-2018 YpsIP31758_0985 4ebb10d7718c05d751cb0cce9ab05faf 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 32 53 9.0E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0840 93674120e797a1ae7178f82a55004f83 170 Pfam PF17283 SprT-like zinc ribbon domain 125 165 6.2E-11 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain YpsIP31758_0840 93674120e797a1ae7178f82a55004f83 170 SMART SM00731 16 165 2.5E-68 T 12-10-2018 IPR006640 SprT-like YpsIP31758_0840 93674120e797a1ae7178f82a55004f83 170 Pfam PF10263 SprT-like family 21 119 7.0E-17 T 12-10-2018 IPR006640 SprT-like YpsIP31758_0840 93674120e797a1ae7178f82a55004f83 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.885 T 12-10-2018 IPR023483 Uncharacterised protein family SprT YpsIP31758_3065 2fdd02605cb6e751036b20f33eff01fb 117 Pfam PF02635 DsrE/DsrF-like family 3 117 8.4E-21 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YpsIP31758_3065 2fdd02605cb6e751036b20f33eff01fb 117 SUPERFAMILY SSF75169 1 117 7.07E-33 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3065 2fdd02605cb6e751036b20f33eff01fb 117 Gene3D G3DSA:3.40.1260.10 2 117 1.2E-31 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3450 7a414036476760cba4f3bf26e9630788 154 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 154 35.555 T 12-10-2018 IPR020914 Uncharacterised protein family UPF0442 YpsIP31758_3450 7a414036476760cba4f3bf26e9630788 154 Pfam PF12821 Threonine/Serine exporter, ThrE 10 144 2.8E-36 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 SUPERFAMILY SSF56784 4 212 3.72E-47 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 5.4E-25 T 12-10-2018 YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.7E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.7E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.7E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 7.3E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 Gene3D G3DSA:3.40.50.1000 7 193 2.3E-45 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_4162 028abc3116800ccff89aa0227bc3a4de 222 Gene3D G3DSA:1.10.150.240 19 86 2.3E-45 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_2445 d2691a9e0adf97359b456baef68def7e 614 Gene3D G3DSA:1.10.510.40 397 604 6.4E-71 T 12-10-2018 YpsIP31758_2445 d2691a9e0adf97359b456baef68def7e 614 Gene3D G3DSA:1.10.274.90 6 148 1.2E-44 T 12-10-2018 YpsIP31758_2445 d2691a9e0adf97359b456baef68def7e 614 Pfam PF04183 IucA / IucC family 159 408 1.7E-76 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 YpsIP31758_2445 d2691a9e0adf97359b456baef68def7e 614 Pfam PF06276 Ferric iron reductase FhuF-like transporter 429 586 5.4E-41 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain YpsIP31758_1104 4a38dcbf7818d2f3219b800a25b6644b 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.922 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YpsIP31758_1104 4a38dcbf7818d2f3219b800a25b6644b 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 3.6E-69 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YpsIP31758_1104 4a38dcbf7818d2f3219b800a25b6644b 200 PIRSF PIRSF001296 1 192 7.5E-75 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YpsIP31758_1104 4a38dcbf7818d2f3219b800a25b6644b 200 Pfam PF02669 K+-transporting ATPase, c chain 5 186 3.7E-67 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YpsIP31758_2890 e98e7782e60bb6af45939d1334d727a8 113 Gene3D G3DSA:3.30.1450.10 34 113 3.2E-30 T 12-10-2018 IPR037873 BamE-like YpsIP31758_2890 e98e7782e60bb6af45939d1334d727a8 113 Pfam PF04355 SmpA / OmlA family 35 104 4.4E-26 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 YpsIP31758_2890 e98e7782e60bb6af45939d1334d727a8 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 31.597 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE YpsIP31758_3535 945915502f6e7e837f6bcd9a813baddd 348 Pfam PF01435 Peptidase family M48 157 340 1.3E-26 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YpsIP31758_0252 92fb075f906b1ec738026444fdca1d70 215 Gene3D G3DSA:2.60.40.10 19 142 4.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2192 142e05e942370749ccbe6567b08af073 154 PIRSF PIRSF029208 1 150 2.3E-60 T 12-10-2018 IPR016912 Bacteriophage P2, GpU YpsIP31758_2192 142e05e942370749ccbe6567b08af073 154 Pfam PF06995 Phage P2 GpU 6 125 8.9E-46 T 12-10-2018 IPR009734 Myoviridae, GpU YpsIP31758_0034 b9cebec120d3a1cb6a4ec4abd6106206 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 5.0E-140 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 YpsIP31758_0034 b9cebec120d3a1cb6a4ec4abd6106206 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 YpsIP31758_0034 b9cebec120d3a1cb6a4ec4abd6106206 461 Pfam PF00860 Permease family 33 425 8.1E-109 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0034 b9cebec120d3a1cb6a4ec4abd6106206 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 3.1E-127 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Pfam PF00684 DnaJ central domain 147 207 4.6E-16 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 SUPERFAMILY SSF46565 1 108 2.36E-34 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 SUPERFAMILY SSF57938 134 211 4.32E-24 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Pfam PF01556 DnaJ C terminal domain 121 333 2.3E-46 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 PRINTS PR00625 DnaJ domain signature 62 81 4.3E-32 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 PRINTS PR00625 DnaJ domain signature 7 25 4.3E-32 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 PRINTS PR00625 DnaJ domain signature 25 40 4.3E-32 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 PRINTS PR00625 DnaJ domain signature 42 62 4.3E-32 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 SUPERFAMILY SSF49493 115 262 4.32E-21 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 SMART SM00271 4 62 5.1E-26 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Gene3D G3DSA:2.60.260.20 257 360 7.1E-30 T 12-10-2018 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.789 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Gene3D G3DSA:1.10.287.110 1 114 9.9E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 SUPERFAMILY SSF49493 259 344 3.53E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.8E-143 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Pfam PF00226 DnaJ domain 5 67 8.5E-26 T 12-10-2018 IPR001623 DnaJ domain YpsIP31758_3465 24d7ebf3c04a7ffbcd2c2ef144b37e71 379 Gene3D G3DSA:2.10.230.10 145 211 9.5E-24 T 12-10-2018 YpsIP31758_1342 55f213166c8e62dd89903d6c95a25692 258 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 251 3.8E-27 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 Gene3D G3DSA:3.40.190.10 35 309 2.0E-107 T 12-10-2018 YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 SUPERFAMILY SSF53850 33 332 2.91E-72 T 12-10-2018 YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 Gene3D G3DSA:3.40.190.10 128 314 2.0E-107 T 12-10-2018 YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 PIRSF PIRSF002825 7 339 3.9E-80 T 12-10-2018 IPR026045 Ferric binding protein YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 YpsIP31758_1350 3c35022bd8d16f8695591b07bb9ba105 339 Pfam PF13343 Bacterial extracellular solute-binding protein 81 309 3.5E-27 T 12-10-2018 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 208 447 2.07E-32 T 12-10-2018 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 Pfam PF00012 Hsp70 protein 331 422 9.8E-6 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 Pfam PF00012 Hsp70 protein 130 228 5.2E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.30.420.40 379 433 7.5E-13 T 12-10-2018 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 SUPERFAMILY SSF53067 1 204 1.91E-26 T 12-10-2018 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 Gene3D G3DSA:3.90.640.10 311 378 7.5E-13 T 12-10-2018 YpsIP31758_1223 1d25c864989977935e8e4af24cf659a7 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YpsIP31758_3728 b35dd3745643b317afe0b92f641e7979 222 Pfam PF01478 Type IV leader peptidase family 81 180 2.8E-10 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 541 577 1.7E-5 T 12-10-2018 IPR030930 Adhesin of bacterial autotransporter system YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 942 969 1.1E-4 T 12-10-2018 IPR030930 Adhesin of bacterial autotransporter system YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1142 1541 4.7E-100 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 SUPERFAMILY SSF103515 1251 1541 1.57E-44 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 Pfam PF03797 Autotransporter beta-domain 1283 1517 1.6E-37 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 Gene3D G3DSA:2.160.20.20 832 1237 1.9E-29 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 SMART SM00869 1280 1530 1.4E-34 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 Gene3D G3DSA:2.160.20.20 522 772 3.1E-22 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 SUPERFAMILY SSF51126 884 1237 4.08E-20 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 Gene3D G3DSA:2.40.128.130 1238 1541 1.1E-55 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_1179 b72f52f38302c4f34a7ab5280ff3b2dd 1541 Pfam PF03212 Pertactin 1129 1236 1.1E-14 T 12-10-2018 IPR004899 Pertactin, central region YpsIP31758_2741 1f7d8ca24956cf59361a43b0a0ceeff5 502 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 212 375 2.0E-20 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain YpsIP31758_2741 1f7d8ca24956cf59361a43b0a0ceeff5 502 PIRSF PIRSF007349 1 498 1.0E-156 T 12-10-2018 IPR007067 Tail sheath protein YpsIP31758_2741 1f7d8ca24956cf59361a43b0a0ceeff5 502 Pfam PF17482 Phage tail sheath C-terminal domain 384 496 1.4E-8 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 SUPERFAMILY SSF51735 3 224 7.69E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 Gene3D G3DSA:3.40.50.720 2 235 6.8E-68 T 12-10-2018 YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 Pfam PF00106 short chain dehydrogenase 2 187 4.5E-54 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1864 1e4d9c4c01e65e82fd17207fc0192d3b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2931 88125d50e5e16f6c44cb8260426f9b66 619 SUPERFAMILY SSF52058 393 538 4.08E-6 T 12-10-2018 YpsIP31758_2931 88125d50e5e16f6c44cb8260426f9b66 619 Gene3D G3DSA:3.80.10.10 395 609 1.1E-8 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily YpsIP31758_2931 88125d50e5e16f6c44cb8260426f9b66 619 Pfam PF11041 Protein of unknown function (DUF2612) 32 94 1.7E-13 T 12-10-2018 IPR021283 Protein of unknown function DUF2612 YpsIP31758_2931 88125d50e5e16f6c44cb8260426f9b66 619 Pfam PF11041 Protein of unknown function (DUF2612) 101 185 3.6E-17 T 12-10-2018 IPR021283 Protein of unknown function DUF2612 YpsIP31758_0988 2bae90ccc80a7f00e7cd65cdbb361ab6 136 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 51 132 7.0E-28 T 12-10-2018 IPR022204 Prepilin peptidase dependent protein C YpsIP31758_0988 2bae90ccc80a7f00e7cd65cdbb361ab6 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0988 2bae90ccc80a7f00e7cd65cdbb361ab6 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 49 1.5E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_2247 a21d4ba4e56304d27b1ba15a60972671 68 Gene3D G3DSA:1.10.260.40 1 60 1.2E-27 T 12-10-2018 YpsIP31758_2247 a21d4ba4e56304d27b1ba15a60972671 68 SUPERFAMILY SSF47413 1 57 4.72E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_2247 a21d4ba4e56304d27b1ba15a60972671 68 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 59 8.2E-22 T 12-10-2018 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 212 327 8.4E-42 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 SUPERFAMILY SSF52540 1 211 1.57E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 Gene3D G3DSA:1.20.272.10 213 335 1.7E-42 T 12-10-2018 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 205 7.0E-63 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 SUPERFAMILY SSF48019 213 334 1.22E-36 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 Gene3D G3DSA:3.40.50.300 1 166 1.6E-48 T 12-10-2018 YpsIP31758_1584 d8d7d7c9cb45c32d448922c01e466da8 340 Pfam PF13177 DNA polymerase III, delta subunit 10 161 1.1E-40 T 12-10-2018 YpsIP31758_1414 6c73359c526560ca9f376b022da7bf19 345 PIRSF PIRSF020588 1 344 3.1E-154 T 12-10-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 YpsIP31758_3029 d1fb86111f615234a75da55c5410cf56 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 2.7E-24 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_3029 d1fb86111f615234a75da55c5410cf56 159 SUPERFAMILY SSF55826 2 155 1.83E-44 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_3029 d1fb86111f615234a75da55c5410cf56 159 PIRSF PIRSF006181 1 159 7.9E-55 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YpsIP31758_3029 d1fb86111f615234a75da55c5410cf56 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 2.1E-54 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YpsIP31758_3029 d1fb86111f615234a75da55c5410cf56 159 Gene3D G3DSA:3.90.960.10 1 159 3.0E-62 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YpsIP31758_1678 e66bd506189858e93c24a05368bc0e70 387 SUPERFAMILY SSF49401 251 386 1.29E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1678 e66bd506189858e93c24a05368bc0e70 387 Pfam PF00419 Fimbrial protein 249 387 5.8E-13 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_1678 e66bd506189858e93c24a05368bc0e70 387 Gene3D G3DSA:2.60.40.1090 250 387 8.0E-25 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_3162 3d18537a3053854a95b35b035ab4c400 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.32 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YpsIP31758_3162 3d18537a3053854a95b35b035ab4c400 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.7E-103 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YpsIP31758_3162 3d18537a3053854a95b35b035ab4c400 198 PIRSF PIRSF006102 1 198 3.5E-64 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_3162 3d18537a3053854a95b35b035ab4c400 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 6.8E-58 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_3576 3a773cd3a108cc426d09ab9c0d776c29 410 Pfam PF05426 Alginate lyase 71 350 2.0E-71 T 12-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YpsIP31758_3576 3a773cd3a108cc426d09ab9c0d776c29 410 Gene3D G3DSA:1.50.10.100 31 402 8.0E-117 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_3576 3a773cd3a108cc426d09ab9c0d776c29 410 SUPERFAMILY SSF48230 78 357 5.77E-47 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 YpsIP31758_0450 5b93e21ef84f78f4a542f23940c093d2 185 Pfam PF02470 MlaD protein 39 116 2.5E-18 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_0450 5b93e21ef84f78f4a542f23940c093d2 185 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 3.4E-54 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 YpsIP31758_2089 2ff6a33547cf062e9a94c35514db71f4 357 SUPERFAMILY SSF53474 56 353 8.7E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2089 2ff6a33547cf062e9a94c35514db71f4 357 Gene3D G3DSA:3.40.50.1820 26 357 2.6E-108 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2089 2ff6a33547cf062e9a94c35514db71f4 357 Pfam PF12697 Alpha/beta hydrolase family 84 308 1.2E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_0399 98824e785c47f5a7d2c241aae8d17aaf 331 Gene3D G3DSA:2.40.10.340 122 266 3.9E-35 T 12-10-2018 YpsIP31758_0399 98824e785c47f5a7d2c241aae8d17aaf 331 Pfam PF04085 rod shape-determining protein MreC 123 269 1.3E-37 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 YpsIP31758_0399 98824e785c47f5a7d2c241aae8d17aaf 331 PIRSF PIRSF038471 2 284 2.9E-74 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 YpsIP31758_0399 98824e785c47f5a7d2c241aae8d17aaf 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 1.2E-113 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 YpsIP31758_0399 98824e785c47f5a7d2c241aae8d17aaf 331 Gene3D G3DSA:2.40.10.350 180 257 3.9E-35 T 12-10-2018 YpsIP31758_1005 7ac59b1252d40f0a871d3d4738da1476 183 Hamap MF_01104 Protein Syd [syd]. 3 181 37.006 T 12-10-2018 IPR009948 Syd GO:0009898 YpsIP31758_1005 7ac59b1252d40f0a871d3d4738da1476 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 6.1E-72 T 12-10-2018 IPR009948 Syd GO:0009898 YpsIP31758_1005 7ac59b1252d40f0a871d3d4738da1476 183 Gene3D G3DSA:3.40.1580.20 1 181 1.4E-67 T 12-10-2018 IPR038228 Syd superfamily YpsIP31758_1488 9a6a70b84887273b5d613b84904377b2 86 SUPERFAMILY SSF159871 3 86 2.22E-26 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_1488 9a6a70b84887273b5d613b84904377b2 86 Gene3D G3DSA:3.30.1660.10 22 86 7.6E-18 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_1488 9a6a70b84887273b5d613b84904377b2 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 5.0E-19 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_2538 b8dafbb30f2234851165fec8f1f4f4c9 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 707 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS YpsIP31758_2538 b8dafbb30f2234851165fec8f1f4f4c9 712 Pfam PF13515 Fusaric acid resistance protein-like 408 527 4.2E-23 T 12-10-2018 YpsIP31758_2538 b8dafbb30f2234851165fec8f1f4f4c9 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 707 4.0E-290 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK YpsIP31758_2538 b8dafbb30f2234851165fec8f1f4f4c9 712 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 3.4E-113 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal YpsIP31758_3213 eca8bf2e7e73fceac54c04cdc5743cca 243 Gene3D G3DSA:3.60.140.10 1 243 2.7E-94 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily YpsIP31758_3213 eca8bf2e7e73fceac54c04cdc5743cca 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 2.5E-76 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YpsIP31758_3213 eca8bf2e7e73fceac54c04cdc5743cca 243 SUPERFAMILY SSF64438 3 242 6.23E-87 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic YpsIP31758_3213 eca8bf2e7e73fceac54c04cdc5743cca 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.2E-67 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YpsIP31758_3946 6561679a587534c44c5c85d0115ad873 706 Pfam PF12805 FUSC-like inner membrane protein yccS 64 332 2.3E-68 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal YpsIP31758_3946 6561679a587534c44c5c85d0115ad873 706 Pfam PF13515 Fusaric acid resistance protein-like 379 499 2.8E-19 T 12-10-2018 YpsIP31758_3946 6561679a587534c44c5c85d0115ad873 706 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 686 4.0E-155 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK YpsIP31758_2198 312498b0b8e1c2ee8cdcb2ee76ad00e9 402 Pfam PF07484 Phage Tail Collar Domain 261 308 9.2E-14 T 12-10-2018 IPR011083 Phage tail collar domain YpsIP31758_2198 312498b0b8e1c2ee8cdcb2ee76ad00e9 402 Gene3D G3DSA:3.90.1340.10 257 309 1.1E-24 T 12-10-2018 IPR037053 Phage tail collar domain superfamily YpsIP31758_2198 312498b0b8e1c2ee8cdcb2ee76ad00e9 402 SUPERFAMILY SSF88874 256 401 7.59E-34 T 12-10-2018 YpsIP31758_4124 b7437e96ef772d3203b84ebae9b6879c 158 Pfam PF10517 Electron transfer DM13 62 157 8.2E-22 T 12-10-2018 IPR019545 DM13 domain YpsIP31758_2305 7278e2de0ebb191db8bb38d7f82a67cd 139 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 131 4.3E-35 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system YpsIP31758_2305 7278e2de0ebb191db8bb38d7f82a67cd 139 Gene3D G3DSA:3.30.160.250 2 88 3.4E-11 T 12-10-2018 YpsIP31758_2305 7278e2de0ebb191db8bb38d7f82a67cd 139 SUPERFAMILY SSF143100 2 67 4.71E-10 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 Pfam PF00484 Carbonic anhydrase 38 187 1.6E-49 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 Gene3D G3DSA:3.40.1050.10 1 220 1.2E-85 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 SMART SM00947 30 192 4.1E-65 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YpsIP31758_3350 c2ca37e909d37c20e37d939803c82435 220 SUPERFAMILY SSF53056 1 212 8.24E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 Pfam PF00258 Flavodoxin 6 137 1.3E-22 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 SUPERFAMILY SSF52218 1 148 7.24E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 PRINTS PR00369 Flavodoxin signature 84 94 6.4E-7 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 PRINTS PR00369 Flavodoxin signature 108 127 6.4E-7 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 PRINTS PR00369 Flavodoxin signature 53 64 6.4E-7 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YpsIP31758_1008 06cca8ba5a4db24b47d700365c7f90ce 149 Gene3D G3DSA:3.40.50.360 1 149 3.2E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_2405 049f088c91ba851bb208e36c2d7ff23d 293 SUPERFAMILY SSF88713 8 291 1.43E-61 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YpsIP31758_2405 049f088c91ba851bb208e36c2d7ff23d 293 Gene3D G3DSA:3.20.20.370 2 292 2.3E-100 T 12-10-2018 YpsIP31758_2405 049f088c91ba851bb208e36c2d7ff23d 293 Pfam PF01522 Polysaccharide deacetylase 41 145 5.0E-20 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 YpsIP31758_0926 c0833bf9070548425deca0ad169f0273 435 Gene3D G3DSA:1.20.1250.20 232 432 1.2E-27 T 12-10-2018 YpsIP31758_0926 c0833bf9070548425deca0ad169f0273 435 Pfam PF07690 Major Facilitator Superfamily 29 389 8.9E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0926 c0833bf9070548425deca0ad169f0273 435 SUPERFAMILY SSF103473 14 431 8.5E-80 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0926 c0833bf9070548425deca0ad169f0273 435 Gene3D G3DSA:1.20.1250.20 14 209 1.2E-44 T 12-10-2018 YpsIP31758_1496 1943185fbda7494b50a540868fa2e8ec 375 SUPERFAMILY SSF48452 71 167 3.4E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1496 1943185fbda7494b50a540868fa2e8ec 375 Pfam PF02698 DUF218 domain 204 320 1.3E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 YpsIP31758_1496 1943185fbda7494b50a540868fa2e8ec 375 Gene3D G3DSA:1.25.40.10 29 243 3.4E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0505 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 SMART SM00327 3 180 5.3E-18 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0505 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Pfam PF15616 TerY-C metal binding domain 217 346 1.7E-53 T 12-10-2018 IPR028274 TerY-C metal binding domain YpsIP31758_0505 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 SUPERFAMILY SSF53300 5 179 1.53E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_0505 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Pfam PF00092 von Willebrand factor type A domain 6 170 5.6E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A YpsIP31758_0505 aacb4e84d4ea0ba8c4e650bb5e1b29b6 346 Gene3D G3DSA:3.40.50.410 2 181 9.4E-23 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 Gene3D G3DSA:1.10.132.20 1 34 1.2E-7 T 12-10-2018 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 Pfam PF01765 Ribosome recycling factor 20 183 2.9E-62 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.5E-79 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 SUPERFAMILY SSF55194 2 184 4.19E-70 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 Gene3D G3DSA:3.30.1360.40 35 100 6.0E-30 T 12-10-2018 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 Gene3D G3DSA:1.10.132.20 101 185 6.0E-28 T 12-10-2018 YpsIP31758_1016 884eb179a33cfe769963dc2d44f6206a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.659 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 YpsIP31758_0571 2b1431fb976a9a4848e32fe3722caddd 386 SUPERFAMILY SSF56059 1 383 7.06E-93 T 12-10-2018 YpsIP31758_0571 2b1431fb976a9a4848e32fe3722caddd 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.1E-163 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YpsIP31758_0571 2b1431fb976a9a4848e32fe3722caddd 386 SUPERFAMILY SSF52440 174 279 1.06E-41 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_0571 2b1431fb976a9a4848e32fe3722caddd 386 Gene3D G3DSA:3.30.1490.330 263 343 2.4E-28 T 12-10-2018 YpsIP31758_3550 d32e8c335cbcaa0909c41e775bef9634 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.8E-52 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_3550 d32e8c335cbcaa0909c41e775bef9634 152 SUPERFAMILY SSF51197 1 151 2.0E-44 T 12-10-2018 YpsIP31758_3550 d32e8c335cbcaa0909c41e775bef9634 152 Gene3D G3DSA:2.60.120.370 1 152 3.1E-41 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily YpsIP31758_3550 d32e8c335cbcaa0909c41e775bef9634 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 6.6E-45 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 243 1.2E-9 T 12-10-2018 YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 Gene3D G3DSA:3.40.30.10 19 255 1.6E-111 T 12-10-2018 YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 SUPERFAMILY SSF47616 117 259 4.18E-34 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 Gene3D G3DSA:1.20.1050.10 133 249 1.6E-111 T 12-10-2018 YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 4.5E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YpsIP31758_0370 e88083108a470597a37e8bbc313ecb94 283 SUPERFAMILY SSF52833 39 131 4.63E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_3272 3f488f48da8bbc3a084ae60b9b608e06 83 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 1.5E-23 T 12-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 9.1E-135 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.1E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.1E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.1E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.1E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.1E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 Gene3D G3DSA:3.40.1690.10 217 359 6.6E-59 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.3E-125 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YpsIP31758_2334 be1520bb1673f38bb3ff2d0aeac989de 386 SUPERFAMILY SSF160544 244 351 1.11E-40 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal YpsIP31758_2104 a345758f76d6bc0fcf63d95c5ebdb882 428 Gene3D G3DSA:3.40.50.12780 9 325 6.6E-38 T 12-10-2018 YpsIP31758_2104 a345758f76d6bc0fcf63d95c5ebdb882 428 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 424 1.4E-177 T 12-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YpsIP31758_2029 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Pfam PF00950 ABC 3 transport family 1 255 1.6E-84 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 YpsIP31758_2029 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Gene3D G3DSA:1.10.3470.10 31 260 1.8E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_2029 91ffbb1db21c6b03b93e2eeb5ab0450a 261 SUPERFAMILY SSF81345 3 255 1.05E-41 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_0966 4c2fd3c3d4f590e118e45d3d42428c44 211 Pfam PF01323 DSBA-like thioredoxin domain 9 185 1.2E-6 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 YpsIP31758_0966 4c2fd3c3d4f590e118e45d3d42428c44 211 Gene3D G3DSA:3.40.30.10 3 211 1.6E-47 T 12-10-2018 YpsIP31758_0966 4c2fd3c3d4f590e118e45d3d42428c44 211 SUPERFAMILY SSF52833 4 192 6.1E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_2668 afa58f0ebc8cdbbac642fd1e7d90082d 360 Gene3D G3DSA:1.10.3470.10 27 359 3.4E-97 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_2668 afa58f0ebc8cdbbac642fd1e7d90082d 360 Pfam PF01032 FecCD transport family 42 355 1.4E-84 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_2668 afa58f0ebc8cdbbac642fd1e7d90082d 360 SUPERFAMILY SSF81345 24 355 2.88E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.10.25.10 210 315 1.5E-40 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 Pfam PF00551 Formyl transferase 6 181 3.3E-50 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.8E-31 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 1.1E-111 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF53328 5 207 2.62E-65 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.40.50.170 1 209 4.8E-88 T 12-10-2018 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.621 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 YpsIP31758_3883 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF50486 208 309 1.88E-36 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_A0029 0afee197433eb489c9a4d26bfecef781 125 ProDom PD031251 TRAK PLASMID ORIT BINDING TRANSFER SYSTEM DNA ORIT-BINDING SEQUENCING DIRECT 1 74 7.0E-19 T 12-10-2018 IPR035225 Protein of unknown function DUF5338 YpsIP31758_A0029 0afee197433eb489c9a4d26bfecef781 125 Pfam PF17273 Family of unknown function (DUF5338) 3 72 1.6E-21 T 12-10-2018 IPR035225 Protein of unknown function DUF5338 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 SUPERFAMILY SSF47413 7 65 1.97E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 3.7E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:1.10.260.40 2 65 9.8E-22 T 12-10-2018 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:3.40.50.2300 168 296 7.7E-41 T 12-10-2018 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 Gene3D G3DSA:3.40.50.2300 67 316 7.7E-41 T 12-10-2018 YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 SUPERFAMILY SSF53822 65 319 8.78E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 Pfam PF13407 Periplasmic binding protein domain 68 314 8.3E-16 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_1510 1150c775df713f58995966457d4adb8d 334 SMART SM00354 7 77 4.5E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1198 47c7bfeb13cca36f4f00f35af3b46100 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 157 1.1E-60 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_1198 47c7bfeb13cca36f4f00f35af3b46100 159 Gene3D G3DSA:2.30.110.20 2 159 2.2E-52 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_1198 47c7bfeb13cca36f4f00f35af3b46100 159 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 7.2E-24 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_1198 47c7bfeb13cca36f4f00f35af3b46100 159 SUPERFAMILY SSF141452 5 158 1.02E-36 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 Gene3D G3DSA:1.10.760.10 180 327 3.3E-106 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 SMART SM01235 14 151 2.8E-49 T 12-10-2018 IPR025992 Haem-binding domain YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 Gene3D G3DSA:1.10.760.10 178 455 3.3E-106 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF00034 Cytochrome c 335 451 4.7E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF03150 Di-haem cytochrome c peroxidase 180 327 1.9E-49 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 SUPERFAMILY SSF46626 316 455 2.01E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 SUPERFAMILY SSF46626 165 315 1.26E-46 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_3278 f32c6fd55393d600798bfa5cf16806a3 459 Pfam PF14376 Haem-binding domain 17 148 8.5E-33 T 12-10-2018 IPR025992 Haem-binding domain YpsIP31758_1335 eb065307b6d08869cf21e8dc0d903ac3 174 SUPERFAMILY SSF81342 3 174 9.42E-29 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 YpsIP31758_1335 eb065307b6d08869cf21e8dc0d903ac3 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 5.3E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YpsIP31758_2173 ad9e75437c50a94c6180543fa7301ab6 337 Gene3D G3DSA:3.40.50.720 6 310 1.2E-71 T 12-10-2018 YpsIP31758_2173 ad9e75437c50a94c6180543fa7301ab6 337 SUPERFAMILY SSF51735 3 153 1.11E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2173 ad9e75437c50a94c6180543fa7301ab6 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 125 1.3E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_2173 ad9e75437c50a94c6180543fa7301ab6 337 Gene3D G3DSA:3.30.360.10 126 324 1.2E-71 T 12-10-2018 YpsIP31758_2173 ad9e75437c50a94c6180543fa7301ab6 337 SUPERFAMILY SSF55347 130 303 3.27E-20 T 12-10-2018 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 SUPERFAMILY SSF52540 322 569 4.99E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 Gene3D G3DSA:1.20.1560.10 1 315 1.0E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 Pfam PF00664 ABC transporter transmembrane region 17 287 5.0E-52 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 Gene3D G3DSA:3.40.50.300 329 571 6.8E-91 T 12-10-2018 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 SMART SM00382 358 544 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 SUPERFAMILY SSF90123 3 321 1.83E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YpsIP31758_2389 8c328f835d5e72d1ece916246dcc5ed6 572 Pfam PF00005 ABC transporter 350 498 2.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 SUPERFAMILY SSF64182 49 466 5.49E-117 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 1.6E-159 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF01368 DHH family 74 175 5.1E-9 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF02272 DHHA1 domain 322 452 5.7E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 Gene3D G3DSA:2.40.50.460 459 576 1.4E-7 T 12-10-2018 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 Gene3D G3DSA:3.90.1640.30 48 326 2.8E-89 T 12-10-2018 YpsIP31758_0881 e6110dbf47a55c147b994e2bc0fbf3b4 577 Gene3D G3DSA:3.10.310.30 328 458 1.4E-30 T 12-10-2018 YpsIP31758_0662 e924d810f114d6bc2609fb10f0418e03 303 Pfam PF00691 OmpA family 170 265 3.4E-12 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_0662 e924d810f114d6bc2609fb10f0418e03 303 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 17 67 2.2E-14 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain YpsIP31758_0662 e924d810f114d6bc2609fb10f0418e03 303 Gene3D G3DSA:3.30.1330.60 90 289 8.2E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_0662 e924d810f114d6bc2609fb10f0418e03 303 SUPERFAMILY SSF103088 155 273 2.49E-19 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 Pfam PF00816 H-NS histone family 33 130 7.3E-15 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 PIRSF PIRSF002096 1 138 1.4E-42 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 SMART SM00528 90 138 4.7E-15 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 Gene3D G3DSA:1.10.287.1050 1 84 7.1E-23 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 SUPERFAMILY SSF81273 95 139 5.49E-11 T 12-10-2018 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 Gene3D G3DSA:4.10.430.10 94 140 3.1E-20 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 YpsIP31758_B0123 c5ddd52c88452e81365bc10507f6e42e 141 SUPERFAMILY SSF81273 4 57 8.63E-13 T 12-10-2018 YpsIP31758_3799 dac91b2b712cd37355d2a46f50e668a2 216 Gene3D G3DSA:3.40.50.720 1 209 2.4E-37 T 12-10-2018 YpsIP31758_3799 dac91b2b712cd37355d2a46f50e668a2 216 Pfam PF13460 NAD(P)H-binding 8 195 5.1E-36 T 12-10-2018 IPR016040 NAD(P)-binding domain YpsIP31758_3799 dac91b2b712cd37355d2a46f50e668a2 216 SUPERFAMILY SSF51735 4 206 5.89E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_B0065 fae7c73e6eb0010e8ede64ec68b4c302 615 SUPERFAMILY SSF50998 449 611 1.96E-8 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YpsIP31758_B0065 fae7c73e6eb0010e8ede64ec68b4c302 615 SUPERFAMILY SSF50998 104 491 1.44E-26 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YpsIP31758_B0065 fae7c73e6eb0010e8ede64ec68b4c302 615 SUPERFAMILY SSF50978 10 201 3.3E-5 T 12-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 YpsIP31758_0017 2fc1b1804099385c7ce748c640d9a6d3 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 188 29.853 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 YpsIP31758_0017 2fc1b1804099385c7ce748c640d9a6d3 195 Gene3D G3DSA:3.90.550.10 2 194 4.7E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0017 2fc1b1804099385c7ce748c640d9a6d3 195 Pfam PF12804 MobA-like NTP transferase domain 7 156 1.2E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase YpsIP31758_0017 2fc1b1804099385c7ce748c640d9a6d3 195 SUPERFAMILY SSF53448 3 184 1.03E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_0017 2fc1b1804099385c7ce748c640d9a6d3 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 185 6.9E-69 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 Gene3D G3DSA:1.10.287.1040 9 84 2.8E-25 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 PIRSF PIRSF006488 2 84 5.5E-24 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 SUPERFAMILY SSF116842 9 75 4.71E-21 T 12-10-2018 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 Pfam PF02609 Exonuclease VII small subunit 15 66 3.1E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 56 3.0E-17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 4.7E-23 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3110 20ee1947b3d7ffa5d4092b75adc36825 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.129 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 SUPERFAMILY SSF56112 1 396 5.25E-91 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 Gene3D G3DSA:3.90.1200.10 116 398 7.2E-101 T 12-10-2018 YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 Gene3D G3DSA:3.30.200.20 1 115 3.3E-39 T 12-10-2018 YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 PIRSF PIRSF031134 1 400 8.2E-169 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 Pfam PF01636 Phosphotransferase enzyme family 33 263 5.2E-14 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 3.8E-159 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YpsIP31758_3178 bccda55399fd7f46f3962510cc2ba658 407 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 407 213.748 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YpsIP31758_A0003 0e4b99faa4730706a0e06b614450512a 143 Gene3D G3DSA:1.10.10.1170 26 107 2.3E-13 T 12-10-2018 YpsIP31758_A0003 0e4b99faa4730706a0e06b614450512a 143 Pfam PF07419 PilM 14 142 1.2E-23 T 12-10-2018 IPR009987 PilM, inner membrane YpsIP31758_2581 254e9bb73396fc3b5b6be9bcd83b8173 230 Gene3D G3DSA:3.40.50.300 1 230 1.5E-86 T 12-10-2018 YpsIP31758_2581 254e9bb73396fc3b5b6be9bcd83b8173 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.0E-92 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 YpsIP31758_2581 254e9bb73396fc3b5b6be9bcd83b8173 230 SUPERFAMILY SSF52540 6 224 3.05E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2581 254e9bb73396fc3b5b6be9bcd83b8173 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.924 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 YpsIP31758_2581 254e9bb73396fc3b5b6be9bcd83b8173 230 Pfam PF02224 Cytidylate kinase 8 221 3.1E-81 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 YpsIP31758_2862 5090e086e96ff52eeb5a715e29ae24d1 350 Pfam PF00793 DAHP synthetase I family 41 338 4.5E-107 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_2862 5090e086e96ff52eeb5a715e29ae24d1 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.6E-176 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_2862 5090e086e96ff52eeb5a715e29ae24d1 350 Gene3D G3DSA:3.20.20.70 1 350 2.3E-170 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2862 5090e086e96ff52eeb5a715e29ae24d1 350 SUPERFAMILY SSF51569 7 348 1.36E-137 T 12-10-2018 YpsIP31758_2862 5090e086e96ff52eeb5a715e29ae24d1 350 PIRSF PIRSF001361 1 350 4.3E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_0738 3dc53a189d4811923ff48648487f85e7 765 SUPERFAMILY SSF53955 504 657 1.35E-9 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_0738 3dc53a189d4811923ff48648487f85e7 765 Gene3D G3DSA:2.70.70.10 22 164 6.4E-13 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_0738 3dc53a189d4811923ff48648487f85e7 765 Pfam PF01551 Peptidase family M23 42 155 4.2E-6 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_0738 3dc53a189d4811923ff48648487f85e7 765 SUPERFAMILY SSF51261 31 158 1.2E-6 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_2087 a55b9f65a8e641af4f8b099dd32c1cf9 156 SUPERFAMILY SSF51182 35 155 3.56E-29 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_2087 a55b9f65a8e641af4f8b099dd32c1cf9 156 Pfam PF07883 Cupin domain 66 132 2.5E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel YpsIP31758_2087 a55b9f65a8e641af4f8b099dd32c1cf9 156 Gene3D G3DSA:2.60.120.10 26 155 7.1E-46 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_4125 3b5dc3ffe5e2b7fef8e6dd386bebd33d 118 Gene3D G3DSA:3.30.1370.150 59 118 1.1E-34 T 12-10-2018 YpsIP31758_4125 3b5dc3ffe5e2b7fef8e6dd386bebd33d 118 Gene3D G3DSA:4.10.860.10 1 58 5.0E-13 T 12-10-2018 YpsIP31758_4125 3b5dc3ffe5e2b7fef8e6dd386bebd33d 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 8.1E-33 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 YpsIP31758_0541 3ba79fbf1de11b586dcdce66cba0ce20 210 Pfam PF13309 HTH domain 148 210 7.9E-20 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain YpsIP31758_0541 3ba79fbf1de11b586dcdce66cba0ce20 210 Pfam PF08348 YheO-like PAS domain 8 120 1.8E-39 T 12-10-2018 IPR013559 YheO-like YpsIP31758_0541 3ba79fbf1de11b586dcdce66cba0ce20 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 3 112 3.0E-60 T 12-10-2018 IPR013559 YheO-like YpsIP31758_3752 065c335552de16ac31456b58aeb0aa05 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 8 342 1.2E-97 T 12-10-2018 YpsIP31758_3752 065c335552de16ac31456b58aeb0aa05 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 42.992 T 12-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YpsIP31758_3752 065c335552de16ac31456b58aeb0aa05 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 2.7E-227 T 12-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YpsIP31758_1783 a4768dc5e1796488c1c4b179592f5e8d 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 5.2E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1783 a4768dc5e1796488c1c4b179592f5e8d 321 SUPERFAMILY SSF161098 69 300 3.4E-24 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 Gene3D G3DSA:1.10.150.240 18 80 1.7E-53 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 181 4.6E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 Gene3D G3DSA:3.40.50.1000 4 202 1.7E-53 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 SUPERFAMILY SSF56784 4 203 6.45E-46 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 1.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 1.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_1446 143841f008159d86b1cf7af337aa625e 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.5E-22 T 12-10-2018 YpsIP31758_1930 c5cdeb65a87c35762e57ec7e5dcaa097 299 Gene3D G3DSA:3.20.20.140 18 264 5.3E-82 T 12-10-2018 YpsIP31758_1930 c5cdeb65a87c35762e57ec7e5dcaa097 299 SUPERFAMILY SSF89550 16 289 3.34E-52 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YpsIP31758_1930 c5cdeb65a87c35762e57ec7e5dcaa097 299 SMART SM00481 17 84 4.8E-20 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal YpsIP31758_1930 c5cdeb65a87c35762e57ec7e5dcaa097 299 Gene3D G3DSA:1.10.150.650 112 183 5.3E-82 T 12-10-2018 YpsIP31758_1930 c5cdeb65a87c35762e57ec7e5dcaa097 299 Pfam PF02811 PHP domain 18 115 2.5E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 YpsIP31758_0897 4f4b17914594f5a9a928f38040656bc5 510 Pfam PF06958 S-type Pyocin 269 408 1.8E-40 T 12-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YpsIP31758_0897 4f4b17914594f5a9a928f38040656bc5 510 Pfam PF05488 PAAR motif 9 54 7.3E-9 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0897 4f4b17914594f5a9a928f38040656bc5 510 SUPERFAMILY SSF69369 206 421 4.45E-25 T 12-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 YpsIP31758_0208 8cf016f7358d53e53cf1c080e5419296 238 SUPERFAMILY SSF56784 10 238 6.59E-40 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_0208 8cf016f7358d53e53cf1c080e5419296 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 196 5.2E-9 T 12-10-2018 YpsIP31758_0208 8cf016f7358d53e53cf1c080e5419296 238 Gene3D G3DSA:1.20.120.1600 24 110 7.6E-61 T 12-10-2018 YpsIP31758_0208 8cf016f7358d53e53cf1c080e5419296 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 5.9E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YpsIP31758_0208 8cf016f7358d53e53cf1c080e5419296 238 Gene3D G3DSA:3.40.50.1000 12 231 7.6E-61 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_2516 a97e8f8e3f6b71a7541cb864b6a3eea2 250 SUPERFAMILY SSF52096 7 240 4.1E-47 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_2516 a97e8f8e3f6b71a7541cb864b6a3eea2 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 244 1.5E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YpsIP31758_2516 a97e8f8e3f6b71a7541cb864b6a3eea2 250 Gene3D G3DSA:3.90.226.10 1 224 7.9E-49 T 12-10-2018 YpsIP31758_2516 a97e8f8e3f6b71a7541cb864b6a3eea2 250 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 YpsIP31758_2825 a9133a9b54f5d031e8e63250b201e78c 293 SUPERFAMILY SSF103481 188 290 2.22E-5 T 12-10-2018 YpsIP31758_2825 a9133a9b54f5d031e8e63250b201e78c 293 Pfam PF00892 EamA-like transporter family 10 140 2.4E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2825 a9133a9b54f5d031e8e63250b201e78c 293 Pfam PF00892 EamA-like transporter family 156 288 8.2E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2825 a9133a9b54f5d031e8e63250b201e78c 293 SUPERFAMILY SSF103481 41 142 2.75E-11 T 12-10-2018 YpsIP31758_1620 78acba332b63b54ea18388a9b7742b9c 133 SUPERFAMILY SSF46785 21 126 9.26E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_1620 78acba332b63b54ea18388a9b7742b9c 133 Gene3D G3DSA:1.10.10.10 11 132 5.4E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1620 78acba332b63b54ea18388a9b7742b9c 133 Pfam PF01638 HxlR-like helix-turn-helix 36 123 3.7E-28 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type YpsIP31758_2508 02324ea7389e0c1e2313ad7b0f615778 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 17 218 2.1E-46 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_2508 02324ea7389e0c1e2313ad7b0f615778 228 Gene3D G3DSA:1.25.40.590 7 187 7.9E-48 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_2508 02324ea7389e0c1e2313ad7b0f615778 228 Pfam PF09850 Type VI secretion system protein DotU 16 215 1.7E-44 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0672 8804a4a333b86883b441839f25dde5a7 195 Gene3D G3DSA:2.60.40.3700 34 194 3.7E-65 T 12-10-2018 YpsIP31758_1900 66332152bdf87424b32dfa33c9b58fce 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 3.8E-83 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 YpsIP31758_1900 66332152bdf87424b32dfa33c9b58fce 233 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.008 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 YpsIP31758_1900 66332152bdf87424b32dfa33c9b58fce 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 4.8E-63 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_1900 66332152bdf87424b32dfa33c9b58fce 233 PIRSF PIRSF006102 1 218 9.3E-77 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 YpsIP31758_2398 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 SUPERFAMILY SSF56214 130 205 2.62E-14 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_2398 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 201 1.8E-11 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_2398 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 Gene3D G3DSA:3.90.470.20 130 241 2.7E-5 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YpsIP31758_2398 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 2.1E-7 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 YpsIP31758_2398 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 2.1E-7 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 YpsIP31758_3700 5c61bcdb0f073ab9a949d09d658a021f 468 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 41 463 2.7E-169 T 12-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 SUPERFAMILY SSF51905 7 384 5.88E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 1.3E-124 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 Pfam PF01494 FAD binding domain 8 341 3.1E-26 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 Gene3D G3DSA:3.30.9.50 84 271 5.5E-104 T 12-10-2018 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 5.4E-18 T 12-10-2018 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 5.4E-18 T 12-10-2018 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.4E-18 T 12-10-2018 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.4E-18 T 12-10-2018 YpsIP31758_2914 03b8b65c38a7c30f848e439fd74c164d 393 Gene3D G3DSA:3.50.50.60 9 340 5.5E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 Gene3D G3DSA:1.10.287.950 309 612 5.8E-93 T 12-10-2018 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF16591 Helical bimodular sensor domain 57 282 1.8E-13 T 12-10-2018 IPR032255 Helical bimodular sensor domain YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 577 9.2E-56 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 3.2E-58 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 3.2E-58 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 3.2E-58 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 3.2E-58 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM00283 363 610 1.7E-87 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM00304 310 362 1.4E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 Pfam PF00672 HAMP domain 310 358 1.8E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 SUPERFAMILY SSF58104 330 611 1.7E-74 T 12-10-2018 YpsIP31758_4122 a75b9c1e6f88c964f252a37f6709ded3 649 SMART SM01358 39 288 2.5E-45 T 12-10-2018 IPR032255 Helical bimodular sensor domain YpsIP31758_2507 7e0ac74f0be3e1a2bdc139e37299f909 578 Gene3D G3DSA:3.30.1330.60 436 558 7.0E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2507 7e0ac74f0be3e1a2bdc139e37299f909 578 SUPERFAMILY SSF103088 427 548 1.7E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2507 7e0ac74f0be3e1a2bdc139e37299f909 578 Pfam PF00691 OmpA family 447 543 4.9E-15 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_0971 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 198 380 1.0E-13 T 12-10-2018 YpsIP31758_0971 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 3 197 4.6E-34 T 12-10-2018 YpsIP31758_0971 57d9061cc481929422c9cf91c7e35c75 386 SUPERFAMILY SSF103473 3 378 4.05E-57 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0971 57d9061cc481929422c9cf91c7e35c75 386 Pfam PF07690 Major Facilitator Superfamily 8 313 1.5E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2509 abce39f52d00574cf5eb6b0dcc157e34 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 1.2E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_2509 abce39f52d00574cf5eb6b0dcc157e34 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 2.5E-136 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 Gene3D G3DSA:3.30.1400.10 185 325 9.0E-55 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 SMART SM00771 187 317 2.5E-78 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 206 324 4.0E-65 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 190 316 2.5E-49 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 319 24.729 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 SUPERFAMILY SSF64383 188 321 9.15E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 YpsIP31758_1320 5e4f9afa552b85069280b83d9af662fa 327 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 317 4.3E-83 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 YpsIP31758_2837 b4f0105ad7b8fc23b5646c6619ad2747 307 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.733 T 12-10-2018 IPR010119 Gluconeogenesis factor YpsIP31758_2837 b4f0105ad7b8fc23b5646c6619ad2747 307 Gene3D G3DSA:3.40.50.12300 9 302 5.7E-76 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily YpsIP31758_2837 b4f0105ad7b8fc23b5646c6619ad2747 307 Pfam PF01933 Uncharacterised protein family UPF0052 12 292 5.1E-73 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YpsIP31758_2837 b4f0105ad7b8fc23b5646c6619ad2747 307 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 3.0E-94 T 12-10-2018 IPR010119 Gluconeogenesis factor YpsIP31758_2837 b4f0105ad7b8fc23b5646c6619ad2747 307 SUPERFAMILY SSF142338 11 295 2.75E-80 T 12-10-2018 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 SUPERFAMILY SSF56601 28 479 2.54E-104 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 Gene3D G3DSA:3.40.710.10 249 482 8.6E-68 T 12-10-2018 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 51 452 9.7E-170 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 8.4E-39 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 8.4E-39 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 8.4E-39 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 8.4E-39 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 8.4E-39 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 3.0E-165 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YpsIP31758_3606 4fb551aaa0853fb8d0ad4b325d027ca3 482 Gene3D G3DSA:3.50.80.20 87 186 6.0E-23 T 12-10-2018 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Pfam PF13802 Galactose mutarotase-like 146 213 3.1E-22 T 12-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Gene3D G3DSA:2.60.40.1760 19 242 1.0E-35 T 12-10-2018 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Gene3D G3DSA:2.60.40.1180 630 679 1.1E-13 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 SUPERFAMILY SSF51011 597 678 4.75E-19 T 12-10-2018 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 SUPERFAMILY SSF51445 247 594 4.51E-66 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Pfam PF17137 Domain of unknown function (DUF5110) 700 767 1.6E-8 T 12-10-2018 IPR033403 Domain of unknown function DUF5110 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Gene3D G3DSA:3.20.20.80 244 627 3.2E-111 T 12-10-2018 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Gene3D G3DSA:2.60.40.1180 680 790 1.6E-11 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 Pfam PF01055 Glycosyl hydrolases family 31 238 682 1.1E-115 T 12-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 YpsIP31758_0924 9d1fdf8db952f6367d3f73cb2dbac969 791 SUPERFAMILY SSF74650 2 243 9.73E-47 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.5E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.5E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.5E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 3.3E-33 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.0E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_2303 92b4e8651b29e0425f30e0652f3a0dd6 89 PIRSF PIRSF004669 1 89 1.8E-32 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 SMART SM00532 36 435 3.4E-42 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 SUPERFAMILY SSF50249 317 397 4.28E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 SUPERFAMILY SSF56091 32 314 7.34E-68 T 12-10-2018 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Gene3D G3DSA:3.30.470.90 97 315 4.7E-29 T 12-10-2018 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Gene3D G3DSA:2.40.50.140 316 388 1.5E-9 T 12-10-2018 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 SUPERFAMILY SSF47781 397 562 5.34E-32 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Hamap MF_01587 DNA ligase B [ligB]. 5 563 54.057 T 12-10-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 320 394 2.3E-14 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 125 315 6.9E-18 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YpsIP31758_0042 b96a3753b52d71b2b1d8d46d65c07fa4 567 Gene3D G3DSA:1.10.287.610 36 80 5.1E-5 T 12-10-2018 YpsIP31758_1491 f45c55a141a0fa2eeac9588d82078f4e 336 Gene3D G3DSA:3.40.50.150 60 322 3.2E-78 T 12-10-2018 YpsIP31758_1491 f45c55a141a0fa2eeac9588d82078f4e 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 53.881 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YpsIP31758_1491 f45c55a141a0fa2eeac9588d82078f4e 336 SUPERFAMILY SSF53335 63 321 7.94E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_1491 f45c55a141a0fa2eeac9588d82078f4e 336 PIRSF PIRSF029038 15 335 9.7E-154 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YpsIP31758_1491 f45c55a141a0fa2eeac9588d82078f4e 336 Pfam PF05971 Protein of unknown function (DUF890) 25 322 6.3E-122 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YpsIP31758_0947 b8326b8175802731ca1d9f97a325a9ba 728 SMART SM00869 447 718 1.1E-38 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0947 b8326b8175802731ca1d9f97a325a9ba 728 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 355 713 3.3E-14 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 YpsIP31758_0947 b8326b8175802731ca1d9f97a325a9ba 728 Pfam PF03797 Autotransporter beta-domain 450 707 1.4E-46 T 12-10-2018 IPR005546 Autotransporter beta-domain YpsIP31758_0947 b8326b8175802731ca1d9f97a325a9ba 728 SUPERFAMILY SSF103515 420 728 2.88E-41 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0947 b8326b8175802731ca1d9f97a325a9ba 728 Gene3D G3DSA:2.40.128.130 420 728 1.2E-51 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 Pfam PF02107 Flagellar L-ring protein 45 218 1.0E-57 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.3E-23 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 181 195 4.3E-23 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 160 176 4.3E-23 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 197 211 4.3E-23 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 PRINTS PR01008 Flagellar L-ring protein signature 134 149 4.3E-23 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0645 85fac9e0c4de9f802e35732bd33a0d31 221 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 218 25.186 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:1.10.10.10 7 94 1.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF53850 93 296 2.33E-40 T 12-10-2018 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF03466 LysR substrate binding domain 91 292 1.1E-39 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF46785 3 87 3.59E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 163 262 3.4E-60 T 12-10-2018 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0999 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 103 288 3.4E-60 T 12-10-2018 YpsIP31758_0728 98172bb26420f4a0ad1be144d1fe96b9 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 6.2E-139 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_0728 98172bb26420f4a0ad1be144d1fe96b9 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 8.7E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_3045 961de9215545373084b6fe0e194aa578 327 SUPERFAMILY SSF53448 17 249 1.88E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3045 961de9215545373084b6fe0e194aa578 327 Pfam PF00535 Glycosyl transferase family 2 18 125 5.7E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_3045 961de9215545373084b6fe0e194aa578 327 Gene3D G3DSA:3.90.550.10 2 294 5.8E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2349 5f4ac8aabb8cd57c33f64c1a01896c8a 106 Gene3D G3DSA:1.10.10.710 21 88 8.5E-14 T 12-10-2018 IPR038627 YebG-like superfamily YpsIP31758_2349 5f4ac8aabb8cd57c33f64c1a01896c8a 106 Pfam PF07130 YebG protein 1 74 4.9E-35 T 12-10-2018 IPR009813 Uncharacterised protein family YebG YpsIP31758_3436 0b587fb496eee60a7a7cbce4ebd9bfc2 186 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 13 163 5.5E-55 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_3436 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PIRSF PIRSF028301 2 177 6.1E-63 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_3436 0b587fb496eee60a7a7cbce4ebd9bfc2 186 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 4.0E-55 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_3562 87868827b7802fbedddc584226ba6355 386 PIRSF PIRSF007313 1 359 1.8E-162 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YpsIP31758_3562 87868827b7802fbedddc584226ba6355 386 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 3.8E-155 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.7E-110 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 PIRSF PIRSF039102 41 306 2.6E-93 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 PIRSF PIRSF039102 1 46 2.4E-7 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 37.037 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.1490.20 111 183 2.3E-89 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 1.1E-68 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF52440 3 96 2.97E-29 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 6.1E-18 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.40.50.20 1 84 7.2E-33 T 12-10-2018 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF56059 97 302 3.54E-62 T 12-10-2018 YpsIP31758_3385 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.470.20 85 301 2.3E-89 T 12-10-2018 YpsIP31758_1290 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Gene3D G3DSA:2.60.460.10 33 200 1.7E-65 T 12-10-2018 IPR038714 YfeY-like superfamily YpsIP31758_1290 e8aaf3cfbb997d1931b5a7516be4e5b9 203 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 199 6.0E-101 T 12-10-2018 IPR010938 Protein of unknown function DUF1131 YpsIP31758_1290 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Pfam PF06572 Protein of unknown function (DUF1131) 30 199 2.2E-83 T 12-10-2018 IPR010938 Protein of unknown function DUF1131 YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 395 452 4.1E-6 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 280 348 3.6E-6 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 641 729 2.6E-10 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 163 220 1.8E-6 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 754 813 2.8E-8 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1668 744c117648d29b9389f1750a6e387a2c 883 Pfam PF02470 MlaD protein 46 137 1.3E-15 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1554 5042d4878c99493343cc40e99ab918db 110 Pfam PF07119 Protein of unknown function (DUF1375) 45 104 1.6E-6 T 12-10-2018 IPR010780 Protein of unknown function DUF1375 YpsIP31758_0709 c62db3a333c73973694244004147e0d5 474 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 40 465 1.2E-107 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 YpsIP31758_0709 c62db3a333c73973694244004147e0d5 474 Gene3D G3DSA:1.20.1250.20 248 455 2.6E-10 T 12-10-2018 YpsIP31758_0709 c62db3a333c73973694244004147e0d5 474 Pfam PF13347 MFS/sugar transport protein 41 452 2.5E-76 T 12-10-2018 YpsIP31758_0709 c62db3a333c73973694244004147e0d5 474 SUPERFAMILY SSF103473 34 450 3.4E-27 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_0709 c62db3a333c73973694244004147e0d5 474 Gene3D G3DSA:1.20.1250.20 33 231 1.3E-10 T 12-10-2018 YpsIP31758_1978 8a8f2a6f339b06866761f056e0c9aa84 96 Pfam PF07383 Protein of unknown function (DUF1496) 36 94 9.0E-25 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 Gene3D G3DSA:3.40.50.150 159 339 1.8E-45 T 12-10-2018 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 Pfam PF05175 Methyltransferase small domain 167 333 2.4E-57 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 4.7E-58 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 Gene3D G3DSA:3.40.50.150 1 158 9.0E-59 T 12-10-2018 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.019 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 YpsIP31758_3507 54e7ce9d401f8218bf3b4b43805e2203 347 SUPERFAMILY SSF53335 154 315 3.29E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3954 c8233c93a7e44f555caa08fc37de2137 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.798 T 12-10-2018 IPR023528 Major facilitator superfamily transporter, TsgA YpsIP31758_3954 c8233c93a7e44f555caa08fc37de2137 394 Pfam PF07690 Major Facilitator Superfamily 15 321 2.6E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3954 c8233c93a7e44f555caa08fc37de2137 394 Gene3D G3DSA:1.20.1250.20 2 188 9.2E-16 T 12-10-2018 YpsIP31758_3954 c8233c93a7e44f555caa08fc37de2137 394 Gene3D G3DSA:1.20.1250.20 206 388 3.5E-20 T 12-10-2018 YpsIP31758_3954 c8233c93a7e44f555caa08fc37de2137 394 SUPERFAMILY SSF103473 4 389 9.55E-39 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 50 1.5E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 54 67 1.5E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 37 1.5E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 1.5E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 1.5E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 22 306 41.263 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 Gene3D G3DSA:3.40.50.620 97 234 5.5E-111 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 24 249 4.1E-45 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 22 279 2.7E-112 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 SUPERFAMILY SSF52374 22 300 2.41E-86 T 12-10-2018 YpsIP31758_3339 e886176ec40ad965e6c7011e661a70f8 321 Gene3D G3DSA:3.40.50.620 22 300 5.5E-111 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 428 9.1E-174 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 Pfam PF00202 Aminotransferase class-III 25 426 7.4E-120 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 PIRSF PIRSF000521 128 429 3.4E-36 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 PIRSF PIRSF000521 2 134 0.0016 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 Gene3D G3DSA:3.90.1150.10 7 423 6.4E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 Gene3D G3DSA:3.40.640.10 58 325 6.4E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 280 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YpsIP31758_1218 b495b53c11a993d0cf6202fed0f56ee9 429 SUPERFAMILY SSF53383 23 427 3.13E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_2478 94ef95e1c5fa6d78d12d02c14d9c4789 222 Gene3D G3DSA:3.40.50.300 1 221 6.1E-63 T 12-10-2018 YpsIP31758_2478 94ef95e1c5fa6d78d12d02c14d9c4789 222 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2478 94ef95e1c5fa6d78d12d02c14d9c4789 222 SMART SM00382 30 217 3.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2478 94ef95e1c5fa6d78d12d02c14d9c4789 222 SUPERFAMILY SSF52540 1 218 1.44E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2478 94ef95e1c5fa6d78d12d02c14d9c4789 222 Pfam PF00005 ABC transporter 21 169 1.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_4146 a3f9655ccc7fb6a338c7cfc2d962106d 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YpsIP31758_4146 a3f9655ccc7fb6a338c7cfc2d962106d 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 9.2E-84 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_4146 a3f9655ccc7fb6a338c7cfc2d962106d 320 SUPERFAMILY SSF53686 6 308 2.49E-91 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_4146 a3f9655ccc7fb6a338c7cfc2d962106d 320 Gene3D G3DSA:3.40.50.1100 51 147 7.8E-108 T 12-10-2018 YpsIP31758_4146 a3f9655ccc7fb6a338c7cfc2d962106d 320 Gene3D G3DSA:3.40.50.1100 8 308 7.8E-108 T 12-10-2018 YpsIP31758_2060 62804be4777affca3052b1c14c6e6d11 291 Gene3D G3DSA:3.20.20.190 15 291 2.3E-36 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_2060 62804be4777affca3052b1c14c6e6d11 291 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 29 285 4.8E-18 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YpsIP31758_2060 62804be4777affca3052b1c14c6e6d11 291 SUPERFAMILY SSF51695 24 290 4.71E-49 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 YpsIP31758_0582 6b490230598c4367a32ae1c3cfcef3b8 243 Pfam PF01553 Acyltransferase 62 180 3.4E-32 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_0582 6b490230598c4367a32ae1c3cfcef3b8 243 SMART SM00563 67 182 1.8E-39 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_0582 6b490230598c4367a32ae1c3cfcef3b8 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.7E-48 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 YpsIP31758_0582 6b490230598c4367a32ae1c3cfcef3b8 243 SUPERFAMILY SSF69593 2 237 4.45E-64 T 12-10-2018 YpsIP31758_2052 b8b12049734f7e950c0c0409739d07e3 186 Gene3D G3DSA:1.10.3480.10 1 183 7.8E-33 T 12-10-2018 YpsIP31758_2052 b8b12049734f7e950c0c0409739d07e3 186 Pfam PF02613 Nitrate reductase delta subunit 37 147 2.7E-14 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone YpsIP31758_2052 b8b12049734f7e950c0c0409739d07e3 186 SUPERFAMILY SSF89155 2 180 1.11E-47 T 12-10-2018 IPR036411 TorD-like superfamily YpsIP31758_2052 b8b12049734f7e950c0c0409739d07e3 186 PIRSF PIRSF004690 1 184 3.9E-62 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 Pfam PF13505 Outer membrane protein beta-barrel domain 11 179 1.2E-23 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 Gene3D G3DSA:2.40.160.20 25 179 2.7E-52 T 12-10-2018 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 171 179 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 1.1E-31 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 167 178 1.1E-31 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 52 64 1.1E-31 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 1.1E-31 T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 YpsIP31758_1951 93d10a9b317cb79a19674ba557cbd8d2 179 SUPERFAMILY SSF56925 30 179 2.12E-27 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_4107 067325ff1b01a81214b13132d4c4fc07 185 SUPERFAMILY SSF49401 32 185 2.58E-36 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_4107 067325ff1b01a81214b13132d4c4fc07 185 Pfam PF00419 Fimbrial protein 32 184 5.4E-15 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_4107 067325ff1b01a81214b13132d4c4fc07 185 Gene3D G3DSA:2.60.40.1090 28 185 1.2E-33 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_4044 89f8f947a749968eb31303dae22a5d0e 111 Pfam PF13683 Integrase core domain 33 99 6.4E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 YpsIP31758_4044 89f8f947a749968eb31303dae22a5d0e 111 Gene3D G3DSA:3.30.420.10 12 110 5.7E-5 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YpsIP31758_4044 89f8f947a749968eb31303dae22a5d0e 111 SUPERFAMILY SSF53098 23 103 9.86E-17 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_1078 c049694d96fef92d1df28b11bcece56e 144 Hamap MF_01954 Urease subunit beta [ureB]. 15 115 29.427 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1078 c049694d96fef92d1df28b11bcece56e 144 Gene3D G3DSA:2.10.150.10 14 127 1.1E-49 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1078 c049694d96fef92d1df28b11bcece56e 144 Pfam PF00699 Urease beta subunit 19 113 1.3E-40 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1078 c049694d96fef92d1df28b11bcece56e 144 SUPERFAMILY SSF51278 18 118 1.05E-42 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_1078 c049694d96fef92d1df28b11bcece56e 144 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 18 113 7.5E-41 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 YpsIP31758_2438 c5a933213b11189272ebe3db38075353 296 SUPERFAMILY SSF53448 1 284 5.63E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_2438 c5a933213b11189272ebe3db38075353 296 Pfam PF00483 Nucleotidyl transferase 5 272 2.8E-24 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YpsIP31758_2438 c5a933213b11189272ebe3db38075353 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 272 3.8E-114 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 YpsIP31758_2438 c5a933213b11189272ebe3db38075353 296 Gene3D G3DSA:3.90.550.10 1 296 1.1E-85 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3800 bcb4967dbd4c66435cc220ca47e420f7 63 Pfam PF10636 Hemin uptake protein hemP 28 63 2.1E-17 T 12-10-2018 IPR019600 Hemin uptake protein HemP YpsIP31758_3800 bcb4967dbd4c66435cc220ca47e420f7 63 Gene3D G3DSA:2.10.70.10 26 63 3.1E-18 T 12-10-2018 YpsIP31758_1992 e625f6ee82cb455acf8d07767592b838 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.936 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 YpsIP31758_1992 e625f6ee82cb455acf8d07767592b838 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 2.0E-186 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 YpsIP31758_1164 be258cdb15d52372acb4b84ecfa96505 340 Pfam PF03824 High-affinity nickel-transport protein 75 326 8.6E-42 T 12-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 SUPERFAMILY SSF69287 3 79 5.49E-18 T 12-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 SMART SM00988 11 75 3.1E-16 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 220 2.3E-6 T 12-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.838 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 5.9E-17 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal YpsIP31758_1080 12214bc713bc4000b4800f377de806c5 231 Gene3D G3DSA:2.60.260.20 1 79 9.8E-13 T 12-10-2018 YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 437 5.3E-160 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 SMART SM00382 159 341 4.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 Gene3D G3DSA:3.40.50.12240 15 440 1.8E-142 T 12-10-2018 YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 SUPERFAMILY SSF52540 95 363 3.8E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 357 1.7E-66 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_0634 bc7d1bbc04bc3dbe989c59b4dabad278 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YpsIP31758_0434 397e9cde53988775b301a8dfac884521 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 YpsIP31758_0434 397e9cde53988775b301a8dfac884521 128 Gene3D G3DSA:3.30.1330.40 1 128 3.6E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0434 397e9cde53988775b301a8dfac884521 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 2.5E-43 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 YpsIP31758_0434 397e9cde53988775b301a8dfac884521 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.3E-52 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 YpsIP31758_0434 397e9cde53988775b301a8dfac884521 128 SUPERFAMILY SSF55298 4 127 2.2E-43 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0331 2395a45851fb609219a8fde14175dc7b 290 Gene3D G3DSA:3.80.10.10 2 282 6.3E-13 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily YpsIP31758_0331 2395a45851fb609219a8fde14175dc7b 290 SUPERFAMILY SSF52058 58 247 3.74E-10 T 12-10-2018 YpsIP31758_0797 f0ae8ab8d5fe618a7a3fd418025d68aa 352 Pfam PF15607 Bacterial toxin 44 196 303 1.8E-26 T 12-10-2018 IPR028946 Bacterial toxin 44 YpsIP31758_0797 f0ae8ab8d5fe618a7a3fd418025d68aa 352 Pfam PF05488 PAAR motif 9 77 5.6E-8 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0191 53874ab4585197910d6bec8cb1f61161 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 7.7E-180 T 12-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 YpsIP31758_0191 53874ab4585197910d6bec8cb1f61161 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 68.119 T 12-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 YpsIP31758_3506 b5dc96898767d79f547c633aae137f81 145 SUPERFAMILY SSF102220 27 135 1.23E-36 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3506 b5dc96898767d79f547c633aae137f81 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-47 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3506 b5dc96898767d79f547c633aae137f81 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 2.2E-48 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3506 b5dc96898767d79f547c633aae137f81 145 Gene3D G3DSA:3.40.50.10220 33 137 6.2E-38 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_3506 b5dc96898767d79f547c633aae137f81 145 PIRSF PIRSF029225 2 131 4.0E-55 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YpsIP31758_2487 596c5de534000d63d27ee35c7c4d966b 193 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 32 184 1.8E-39 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_2487 596c5de534000d63d27ee35c7c4d966b 193 Gene3D G3DSA:2.60.40.4150 58 193 4.6E-48 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_2487 596c5de534000d63d27ee35c7c4d966b 193 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 29 174 9.8E-25 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 Gene3D G3DSA:3.40.1350.30 45 189 2.8E-145 T 12-10-2018 YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 1.8E-196 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.786 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 1.6E-191 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 SUPERFAMILY SSF53335 7 365 7.71E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site YpsIP31758_0141 50bb697db991d84b9ce34b221787cdf9 367 Gene3D G3DSA:3.40.50.150 14 362 2.8E-145 T 12-10-2018 YpsIP31758_0945 fd4a881e9bffed600f03888049eee35b 517 Pfam PF00884 Sulfatase 44 396 1.2E-54 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_0945 fd4a881e9bffed600f03888049eee35b 517 Gene3D G3DSA:3.40.720.10 44 415 4.7E-101 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_0945 fd4a881e9bffed600f03888049eee35b 517 SUPERFAMILY SSF53649 42 505 7.98E-97 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_0945 fd4a881e9bffed600f03888049eee35b 517 Gene3D G3DSA:3.30.1120.10 424 511 3.0E-23 T 12-10-2018 YpsIP31758_1345 97b7676c8b930747b03260f7f32265f8 282 Pfam PF13988 Protein of unknown function (DUF4225) 91 255 7.1E-56 T 12-10-2018 IPR025320 Protein of unknown function DUF4225 YpsIP31758_3677 a582a01b1bf08e06352a81f75fd35669 195 Pfam PF04186 FxsA cytoplasmic membrane protein 16 117 1.5E-31 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 YpsIP31758_0687 621b788be580db8284390eb48808bf98 254 Gene3D G3DSA:3.40.50.1820 6 235 2.3E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0687 621b788be580db8284390eb48808bf98 254 SUPERFAMILY SSF53474 8 236 1.65E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_0687 621b788be580db8284390eb48808bf98 254 Pfam PF00975 Thioesterase domain 16 237 1.6E-44 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 YpsIP31758_2550 116e4c800776033c13e27cd7310332d2 428 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 13 414 4.3E-158 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YpsIP31758_2550 116e4c800776033c13e27cd7310332d2 428 Pfam PF04403 Paraquat-inducible protein A 259 415 1.8E-53 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like YpsIP31758_2550 116e4c800776033c13e27cd7310332d2 428 Pfam PF04403 Paraquat-inducible protein A 56 206 1.8E-39 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 Gene3D G3DSA:1.10.10.2730 233 279 3.6E-16 T 12-10-2018 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 Gene3D G3DSA:1.10.10.60 176 232 6.7E-13 T 12-10-2018 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 SUPERFAMILY SSF46689 181 224 4.3E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 7.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 7.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 SMART SM00342 195 278 2.6E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 SUPERFAMILY SSF46689 232 284 1.97E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YpsIP31758_3531 00242f91f0f0129dc64f8fc10a76a251 291 Pfam PF12833 Helix-turn-helix domain 202 280 1.5E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YpsIP31758_2800 9694743e27b000b19a149e291a13345c 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.9E-15 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 YpsIP31758_0873 d49ca5fb44c56e7bd6256343949746e1 88 SUPERFAMILY SSF109910 2 78 1.2E-27 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily YpsIP31758_0873 d49ca5fb44c56e7bd6256343949746e1 88 Gene3D G3DSA:1.10.150.250 1 88 7.4E-39 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily YpsIP31758_0873 d49ca5fb44c56e7bd6256343949746e1 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 9.7E-26 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase YpsIP31758_2312 57864eac10a658b5cf1804d151869770 333 SUPERFAMILY SSF100950 76 327 2.56E-66 T 12-10-2018 IPR037171 NagB/RpiA transferase-like YpsIP31758_2312 57864eac10a658b5cf1804d151869770 333 Gene3D G3DSA:1.10.10.60 22 68 5.6E-16 T 12-10-2018 YpsIP31758_2312 57864eac10a658b5cf1804d151869770 333 Pfam PF04198 Putative sugar-binding domain 78 327 4.7E-68 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 YpsIP31758_2312 57864eac10a658b5cf1804d151869770 333 SUPERFAMILY SSF88659 32 63 1.57E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YpsIP31758_2312 57864eac10a658b5cf1804d151869770 333 Gene3D G3DSA:3.40.50.1360 69 327 8.4E-73 T 12-10-2018 YpsIP31758_3144 e981e80ea039d3a8cfd9cbf1c542683a 185 Gene3D G3DSA:3.40.50.150 17 176 1.3E-12 T 12-10-2018 YpsIP31758_3144 e981e80ea039d3a8cfd9cbf1c542683a 185 SUPERFAMILY SSF53335 14 167 6.69E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YpsIP31758_3144 e981e80ea039d3a8cfd9cbf1c542683a 185 Pfam PF00398 Ribosomal RNA adenine dimethylase 34 152 1.5E-5 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YpsIP31758_1279 f3e20469bb3c9a9ab266aca5deed9ecb 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.028 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 YpsIP31758_1279 f3e20469bb3c9a9ab266aca5deed9ecb 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 3.7E-51 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 YpsIP31758_B0012 dd3d00e141586c36101ab07b6a4cda44 152 Gene3D G3DSA:1.10.10.1170 27 112 2.2E-25 T 12-10-2018 YpsIP31758_B0012 dd3d00e141586c36101ab07b6a4cda44 152 Pfam PF07419 PilM 24 149 5.8E-22 T 12-10-2018 IPR009987 PilM, inner membrane YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF00107 Zinc-binding dehydrogenase 202 318 1.2E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.90.180.10 26 355 2.5E-94 T 12-10-2018 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 85 99 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.40.50.720 178 315 2.5E-94 T 12-10-2018 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 154 8.3E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF51735 168 321 2.14E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 SMART SM00829 26 366 0.0013 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YpsIP31758_3288 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF50129 18 197 6.45E-47 T 12-10-2018 IPR011032 GroES-like superfamily YpsIP31758_0968 42784203e68e43aa6508067ead504a9e 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 4.5E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_0968 42784203e68e43aa6508067ead504a9e 295 Gene3D G3DSA:3.60.15.10 25 262 8.0E-29 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_0968 42784203e68e43aa6508067ead504a9e 295 SUPERFAMILY SSF56281 26 251 6.09E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_0968 42784203e68e43aa6508067ead504a9e 295 SMART SM00849 43 228 3.1E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_1109 ad8ea47039d46715114b18f06d1a3a12 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 2.9E-35 T 12-10-2018 IPR019663 Uncharacterised protein YbfA YpsIP31758_2477 f7932a43b1081ec6c17473c1d2be4d22 420 Gene3D G3DSA:2.40.50.100 74 269 4.8E-29 T 12-10-2018 YpsIP31758_2477 f7932a43b1081ec6c17473c1d2be4d22 420 Gene3D G3DSA:2.40.30.170 68 342 4.8E-29 T 12-10-2018 YpsIP31758_2477 f7932a43b1081ec6c17473c1d2be4d22 420 Gene3D G3DSA:1.10.287.470 108 235 4.8E-29 T 12-10-2018 YpsIP31758_2477 f7932a43b1081ec6c17473c1d2be4d22 420 Pfam PF13437 HlyD family secretion protein 235 320 3.3E-6 T 12-10-2018 YpsIP31758_2477 f7932a43b1081ec6c17473c1d2be4d22 420 Gene3D G3DSA:2.40.420.20 343 404 4.8E-29 T 12-10-2018 YpsIP31758_0419 38506d3759974918c4e845c06455592b 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.167 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 YpsIP31758_0419 38506d3759974918c4e845c06455592b 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.2E-20 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 YpsIP31758_3794 e604c346a7af70b73720e9813384127d 319 Gene3D G3DSA:3.20.20.60 3 300 5.3E-18 T 12-10-2018 YpsIP31758_3794 e604c346a7af70b73720e9813384127d 319 SUPERFAMILY SSF51621 8 250 4.6E-29 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YpsIP31758_3794 e604c346a7af70b73720e9813384127d 319 PIRSF PIRSF015582 1 310 3.6E-66 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like YpsIP31758_3794 e604c346a7af70b73720e9813384127d 319 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 6 300 4.5E-107 T 12-10-2018 IPR039480 C-C bond lyase-like YpsIP31758_0589 c20acde2eb5dbe0365a3e3ef318bf705 220 Pfam PF09335 SNARE associated Golgi protein 48 172 1.7E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein YpsIP31758_3296 d3f3783745daf252971ea24e18cca44e 254 Gene3D G3DSA:3.40.1210.10 1 254 1.8E-104 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YpsIP31758_3296 d3f3783745daf252971ea24e18cca44e 254 SUPERFAMILY SSF64167 2 249 5.62E-82 T 12-10-2018 YpsIP31758_3296 d3f3783745daf252971ea24e18cca44e 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.3E-75 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YpsIP31758_3296 d3f3783745daf252971ea24e18cca44e 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.745 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YpsIP31758_3296 d3f3783745daf252971ea24e18cca44e 254 Pfam PF01975 Survival protein SurE 4 182 3.2E-57 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 SUPERFAMILY SSF110738 1 376 6.15E-146 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 Gene3D G3DSA:3.40.50.10350 1 362 1.1E-143 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.4E-166 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 Gene3D G3DSA:3.90.1510.10 42 276 1.1E-143 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 Pfam PF02595 Glycerate kinase family 3 374 3.2E-152 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YpsIP31758_4052 dd5620d192a805ce385ca1a41e47d1fc 378 PIRSF PIRSF006078 1 377 3.1E-142 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YpsIP31758_2751 505afeecd78dd91db52c5cd8a21408ad 80 Gene3D G3DSA:3.30.910.10 1 79 3.8E-16 T 12-10-2018 IPR036687 DinI-like superfamily YpsIP31758_2751 505afeecd78dd91db52c5cd8a21408ad 80 Pfam PF06183 DinI-like family 17 76 7.9E-22 T 12-10-2018 IPR010391 DNA damage-inducible protein DinI-like YpsIP31758_2751 505afeecd78dd91db52c5cd8a21408ad 80 SUPERFAMILY SSF54857 1 78 1.28E-23 T 12-10-2018 IPR036687 DinI-like superfamily YpsIP31758_2782 4de5edd6c820991386964aab8bf05bde 444 PIRSF PIRSF006060 1 431 7.1E-62 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2782 4de5edd6c820991386964aab8bf05bde 444 Gene3D G3DSA:1.20.1740.10 2 441 9.3E-74 T 12-10-2018 YpsIP31758_2782 4de5edd6c820991386964aab8bf05bde 444 Pfam PF13520 Amino acid permease 10 401 1.9E-48 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2140 83ae588b10f82e5521806fef31f7d46f 175 Gene3D G3DSA:2.60.40.2480 23 175 1.3E-77 T 12-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily YpsIP31758_2140 83ae588b10f82e5521806fef31f7d46f 175 PIRSF PIRSF017018 1 175 1.4E-73 T 12-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type YpsIP31758_2140 83ae588b10f82e5521806fef31f7d46f 175 Pfam PF10634 Fe2+ transport protein 25 173 4.2E-70 T 12-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type YpsIP31758_A0057 ceeb521bb4527152b3cf880ab990ad8c 206 SUPERFAMILY SSF53955 9 123 1.44E-20 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 Pfam PF00005 ABC transporter 269 424 3.1E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 SUPERFAMILY SSF52540 4 230 5.44E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 Pfam PF00005 ABC transporter 21 170 2.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 Gene3D G3DSA:3.40.50.300 2 249 7.1E-54 T 12-10-2018 YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 Gene3D G3DSA:3.40.50.300 250 496 1.9E-44 T 12-10-2018 YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 SMART SM00382 30 218 9.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 SMART SM00382 278 473 0.01 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0813 bd733ce1ebd6372874bd459fdbe868d2 499 SUPERFAMILY SSF52540 254 486 4.47E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3250 406a0ba0204c8898252a040ee2c71806 381 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 340 1.5E-49 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0093 e082bab057e29ce223f71e8b59e2c2ed 237 Gene3D G3DSA:3.50.30.40 29 179 4.3E-51 T 12-10-2018 YpsIP31758_0093 e082bab057e29ce223f71e8b59e2c2ed 237 Pfam PF03737 Aldolase/RraA 32 178 5.5E-38 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YpsIP31758_0093 e082bab057e29ce223f71e8b59e2c2ed 237 SUPERFAMILY SSF89562 27 188 6.54E-48 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YpsIP31758_0093 e082bab057e29ce223f71e8b59e2c2ed 237 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 8 229 1.4E-104 T 12-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.7E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 Gene3D G3DSA:3.40.50.720 2 226 6.2E-56 T 12-10-2018 YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 Pfam PF00106 short chain dehydrogenase 7 187 4.7E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_3129 27fdfa798887d5b66971d382f8376cf7 226 SUPERFAMILY SSF51735 6 226 1.0E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_A0025 4000df840091815e4c350b4c1a555a80 645 SUPERFAMILY SSF52540 137 619 3.45E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0025 4000df840091815e4c350b4c1a555a80 645 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 113 421 6.8E-89 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 YpsIP31758_A0025 4000df840091815e4c350b4c1a555a80 645 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 448 628 5.1E-52 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 YpsIP31758_3574 45c7bbac1b5e47444a74baa4fb88e198 294 SUPERFAMILY SSF161098 55 281 5.1E-57 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3574 45c7bbac1b5e47444a74baa4fb88e198 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 283 9.8E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3574 45c7bbac1b5e47444a74baa4fb88e198 294 Gene3D G3DSA:1.10.3720.10 51 293 1.1E-67 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1944 7a59cf57c1a553702523c5e5c7e4156d 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.59 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 YpsIP31758_1944 7a59cf57c1a553702523c5e5c7e4156d 180 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-71 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 YpsIP31758_1944 7a59cf57c1a553702523c5e5c7e4156d 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.9E-71 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 YpsIP31758_1639 1ba1922c11d3deede158863161808a4f 165 SMART SM00260 14 151 4.8E-43 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 YpsIP31758_1639 1ba1922c11d3deede158863161808a4f 165 Gene3D G3DSA:2.40.50.180 37 146 1.1E-39 T 12-10-2018 YpsIP31758_1639 1ba1922c11d3deede158863161808a4f 165 SUPERFAMILY SSF50341 17 158 2.09E-39 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 YpsIP31758_1639 1ba1922c11d3deede158863161808a4f 165 Gene3D G3DSA:2.30.30.40 20 145 1.1E-39 T 12-10-2018 YpsIP31758_1639 1ba1922c11d3deede158863161808a4f 165 Pfam PF01584 CheW-like domain 18 154 2.2E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 YpsIP31758_1272 2a676b788b59f78c675f40622bfdb390 88 Hamap MF_02200 Chaperone NapD [napD]. 6 83 17.751 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly YpsIP31758_1272 2a676b788b59f78c675f40622bfdb390 88 Pfam PF03927 NapD protein 6 81 2.6E-25 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly YpsIP31758_1272 2a676b788b59f78c675f40622bfdb390 88 Gene3D G3DSA:3.30.70.920 6 76 8.8E-26 T 12-10-2018 YpsIP31758_A0051 57da2f811f84fa3586e469a601f9dd98 240 SUPERFAMILY SSF54427 106 238 6.57E-12 T 12-10-2018 IPR032710 NTF2-like domain superfamily YpsIP31758_A0051 57da2f811f84fa3586e469a601f9dd98 240 Pfam PF04335 VirB8 protein 27 238 7.5E-42 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 12-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 Gene3D G3DSA:3.40.630.30 1 211 1.5E-56 T 12-10-2018 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 Pfam PF00765 Autoinducer synthase 13 187 6.5E-71 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 1.8E-64 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YpsIP31758_0719 a13902a6c643a531440160ad1e3fd1ed 216 SUPERFAMILY SSF55729 1 210 5.93E-46 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_0164 bc3b416271a4998bc4e3f1f409ccd6cf 601 Pfam PF06958 S-type Pyocin 326 466 5.5E-38 T 12-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YpsIP31758_0164 bc3b416271a4998bc4e3f1f409ccd6cf 601 Gene3D G3DSA:3.90.540.10 468 601 2.9E-50 T 12-10-2018 IPR037146 Colicin/pyocin, DNase domain superfamily GO:0004519 YpsIP31758_0164 bc3b416271a4998bc4e3f1f409ccd6cf 601 SUPERFAMILY SSF69369 239 496 4.32E-54 T 12-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 YpsIP31758_0164 bc3b416271a4998bc4e3f1f409ccd6cf 601 SUPERFAMILY SSF54060 467 597 9.42E-50 T 12-10-2018 YpsIP31758_3096 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 4 197 2.8E-17 T 12-10-2018 YpsIP31758_3096 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 213 418 2.4E-14 T 12-10-2018 YpsIP31758_3096 33c1fab5e8c8dec04e7d3c303484f0a3 492 SUPERFAMILY SSF103473 6 407 6.93E-46 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3096 33c1fab5e8c8dec04e7d3c303484f0a3 492 Pfam PF07690 Major Facilitator Superfamily 18 366 2.3E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3096 33c1fab5e8c8dec04e7d3c303484f0a3 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 4.0E-117 T 12-10-2018 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 229 2.1E-14 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 Gene3D G3DSA:2.60.40.10 150 241 1.7E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 PRINTS PR00969 Pili chaperone signature 30 39 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 PRINTS PR00969 Pili chaperone signature 106 123 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 PRINTS PR00969 Pili chaperone signature 165 180 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 PRINTS PR00969 Pili chaperone signature 129 144 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 PRINTS PR00969 Pili chaperone signature 76 97 2.5E-33 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 SUPERFAMILY SSF49584 154 241 1.19E-20 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 Gene3D G3DSA:2.60.40.10 29 148 6.1E-41 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 SUPERFAMILY SSF49354 30 147 3.14E-38 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_4105 d3e7e694d414e83ade6611bde4808825 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 147 5.9E-39 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_2447 1a89ca063a371927abda7ee26095a37a 432 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 339 1.4E-116 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YpsIP31758_2447 1a89ca063a371927abda7ee26095a37a 432 SUPERFAMILY SSF51905 1 254 2.8E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_2447 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 1 420 1.6E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 Gene3D G3DSA:3.80.10.10 30 281 1.2E-52 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 1.6E-16 T 12-10-2018 IPR032674 LRR-containing bacterial E3 ligase, N-terminal MetaCyc: PWY-7511 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SUPERFAMILY SSF52058 70 272 5.1E-28 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 171 190 19.0 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 150 169 220.0 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 233 252 0.067 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 212 231 0.36 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 191 210 0.0042 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 254 273 19.0 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 129 148 0.011 T 12-10-2018 YpsIP31758_0676 2e04ee5f39e74811b79891810e203f36 284 SMART SM00364 108 127 0.011 T 12-10-2018 YpsIP31758_2051 96934f7f93e48777ddc83537f61b4092 187 Gene3D G3DSA:3.15.10.40 17 187 4.1E-71 T 12-10-2018 YpsIP31758_2051 96934f7f93e48777ddc83537f61b4092 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 1.4E-58 T 12-10-2018 IPR010835 Protein of unknown function DUF1439 YpsIP31758_2058 ac9ace51bea95333ab157c10f119dcb7 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 1.3E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_2058 ac9ace51bea95333ab157c10f119dcb7 278 SUPERFAMILY SSF161098 8 270 1.83E-53 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2058 ac9ace51bea95333ab157c10f119dcb7 278 Gene3D G3DSA:1.10.3720.10 3 264 7.1E-45 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_B0010 95bcc09c32df5f4f08fdc957a9bdf583 235 Pfam PF01478 Type IV leader peptidase family 89 197 2.5E-9 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Gene3D G3DSA:3.40.350.10 1 159 3.7E-63 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Gene3D G3DSA:3.90.230.10 161 443 2.4E-75 T 12-10-2018 YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Pfam PF00557 Metallopeptidase family M24 168 430 1.2E-40 T 12-10-2018 IPR000994 Peptidase M24 YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.676 T 12-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YpsIP31758_0284 93eb2a31bf4ce1b51ab4dd8ea0e9ac66 443 SUPERFAMILY SSF55920 163 438 4.84E-53 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 Pfam PF00106 short chain dehydrogenase 14 210 1.8E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 SUPERFAMILY SSF51735 10 243 6.71E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 8.2E-4 T 12-10-2018 YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.4E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_1926 92a630ea8d6f50cbfef8e76a50df58d6 253 Gene3D G3DSA:3.40.50.720 1 250 2.6E-73 T 12-10-2018 YpsIP31758_B0064 19a248d5283920cf1eb4b87862541996 312 SUPERFAMILY SSF56436 63 308 8.48E-54 T 12-10-2018 IPR016187 C-type lectin fold YpsIP31758_B0064 19a248d5283920cf1eb4b87862541996 312 Pfam PF03781 Sulfatase-modifying factor enzyme 1 64 307 2.9E-38 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 YpsIP31758_B0064 19a248d5283920cf1eb4b87862541996 312 Gene3D G3DSA:3.90.1580.10 55 311 4.0E-45 T 12-10-2018 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.40.50.790 68 159 9.7E-81 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.367 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.5E-51 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 PIRSF PIRSF002155 1 227 6.0E-78 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.5E-107 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.30.190.20 25 222 9.7E-81 T 12-10-2018 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3863 8938e3e805f49d50d98e34fe67ae0752 234 SUPERFAMILY SSF56808 6 225 1.83E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 262 282 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 286 312 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 240 260 2.1E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 SUPERFAMILY SSF48029 23 123 1.26E-15 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 SUPERFAMILY SSF48029 131 338 6.02E-50 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Gene3D G3DSA:1.10.220.30 15 102 5.0E-14 T 12-10-2018 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Gene3D G3DSA:1.10.220.30 211 344 3.9E-25 T 12-10-2018 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Pfam PF14841 FliG middle domain 133 199 2.2E-20 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Gene3D G3DSA:1.10.220.30 106 208 1.0E-21 T 12-10-2018 YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Pfam PF01706 FliG C-terminal domain 232 337 3.3E-25 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal YpsIP31758_0632 4e6e1b05912721636887009864df6d98 347 Pfam PF14842 FliG N-terminal domain 23 117 1.1E-19 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YpsIP31758_2814 68ac2190cd1570ab3def7b2cab6aebee 391 Pfam PF12698 ABC-2 family transporter protein 44 383 1.3E-42 T 12-10-2018 YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 Gene3D G3DSA:3.40.50.360 1 171 6.3E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 SUPERFAMILY SSF52218 1 166 6.83E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.5E-73 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 Pfam PF00258 Flavodoxin 5 160 4.7E-27 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 PIRSF PIRSF038996 1 171 3.7E-55 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 YpsIP31758_0878 6f296da2117eff507f9363ae8ed77cb2 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YpsIP31758_3049 bcff0dbbdcf00ca04157931007c3df98 437 Gene3D G3DSA:3.90.1150.10 306 437 8.2E-58 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YpsIP31758_3049 bcff0dbbdcf00ca04157931007c3df98 437 Gene3D G3DSA:3.40.640.10 1 305 5.9E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YpsIP31758_3049 bcff0dbbdcf00ca04157931007c3df98 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 43 429 2.1E-117 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_3049 bcff0dbbdcf00ca04157931007c3df98 437 PIRSF PIRSF000390 8 437 2.1E-127 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YpsIP31758_3049 bcff0dbbdcf00ca04157931007c3df98 437 SUPERFAMILY SSF53383 37 433 5.92E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YpsIP31758_1251 e0b70fbbe533d889cbf2d152e56dff6f 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 132 1.0E-39 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame YpsIP31758_1251 e0b70fbbe533d889cbf2d152e56dff6f 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.832 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame YpsIP31758_1251 e0b70fbbe533d889cbf2d152e56dff6f 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 2.1E-47 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame YpsIP31758_0769 d99ed7dcca7e09b8bbea68986fac9081 195 Pfam PF13592 Winged helix-turn helix 108 157 5.0E-8 T 12-10-2018 IPR025959 Winged helix-turn helix domain YpsIP31758_0769 d99ed7dcca7e09b8bbea68986fac9081 195 Pfam PF13384 Homeodomain-like domain 28 73 1.3E-8 T 12-10-2018 YpsIP31758_0769 d99ed7dcca7e09b8bbea68986fac9081 195 SUPERFAMILY SSF46689 16 140 5.82E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_2758 ca6618d5f9acc0ea151c5e93e3e44902 388 Pfam PF00144 Beta-lactamase 50 367 1.1E-61 T 12-10-2018 IPR001466 Beta-lactamase-related YpsIP31758_2758 ca6618d5f9acc0ea151c5e93e3e44902 388 SUPERFAMILY SSF56601 43 367 1.23E-67 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_2758 ca6618d5f9acc0ea151c5e93e3e44902 388 Gene3D G3DSA:3.40.710.10 37 386 1.2E-138 T 12-10-2018 YpsIP31758_1789 fd4b56c20e01b131d17ba2cd333e240f 80 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 10 70 4.7E-34 T 12-10-2018 IPR014321 Phage shock protein, PspD YpsIP31758_1789 fd4b56c20e01b131d17ba2cd333e240f 80 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 10 70 1.2E-20 T 12-10-2018 IPR014321 Phage shock protein, PspD YpsIP31758_1840 e5eacf3cad89655810624bc9b894e048 31 Pfam PF08049 IlvB leader peptide 2 31 1.7E-15 T 12-10-2018 IPR012566 IlvB leader peptide YpsIP31758_4065 57ebcb3e18401f2d56570ba06ab71f1f 159 Pfam PF00754 F5/8 type C domain 27 145 3.9E-18 T 12-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain YpsIP31758_4065 57ebcb3e18401f2d56570ba06ab71f1f 159 SUPERFAMILY SSF49785 22 147 3.05E-22 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily YpsIP31758_4065 57ebcb3e18401f2d56570ba06ab71f1f 159 Gene3D G3DSA:2.60.120.260 17 159 8.4E-37 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily YpsIP31758_0030 abb44f812b451a5a975d09546c83a9a5 294 Pfam PF03631 Virulence factor BrkB 29 276 1.7E-54 T 12-10-2018 IPR017039 Virulence factor BrkB YpsIP31758_0030 abb44f812b451a5a975d09546c83a9a5 294 PIRSF PIRSF035875 2 293 1.9E-61 T 12-10-2018 IPR017039 Virulence factor BrkB YpsIP31758_0030 abb44f812b451a5a975d09546c83a9a5 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 294 23.226 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial YpsIP31758_0030 abb44f812b451a5a975d09546c83a9a5 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 277 3.4E-91 T 12-10-2018 IPR017039 Virulence factor BrkB YpsIP31758_0348 6361471be08ebaf8c5a634b92b491f09 167 Gene3D G3DSA:3.40.1650.10 3 131 1.8E-25 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_0348 6361471be08ebaf8c5a634b92b491f09 167 SUPERFAMILY SSF102546 1 129 2.35E-31 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_0348 6361471be08ebaf8c5a634b92b491f09 167 Pfam PF05025 RbsD / FucU transport protein family 1 130 8.2E-31 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 YpsIP31758_3553 f521b1fba1dcb1ea7874e059c6da3535 278 SUPERFAMILY SSF161098 72 257 1.27E-27 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3553 f521b1fba1dcb1ea7874e059c6da3535 278 Gene3D G3DSA:1.10.3720.10 65 273 1.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3553 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 1.3E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3553 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 53 1.8E-9 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YpsIP31758_3715 f5d5eb46c15774b6f682e55f3595f542 601 Pfam PF01935 Domain of unknown function DUF87 157 286 1.2E-20 T 12-10-2018 IPR002789 Helicase HerA, central domain YpsIP31758_3715 f5d5eb46c15774b6f682e55f3595f542 601 Gene3D G3DSA:3.40.50.300 131 241 1.4E-17 T 12-10-2018 YpsIP31758_3715 f5d5eb46c15774b6f682e55f3595f542 601 Gene3D G3DSA:3.40.50.300 368 595 1.3E-39 T 12-10-2018 YpsIP31758_3715 f5d5eb46c15774b6f682e55f3595f542 601 SUPERFAMILY SSF52540 143 580 1.14E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 SUPERFAMILY SSF51735 1 306 4.79E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.153 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.40.50.720 3 302 1.2E-120 T 12-10-2018 YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.90.25.10 168 290 1.2E-120 T 12-10-2018 YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 7.3E-136 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 YpsIP31758_0070 90e898e94f58533fe189d8cc7a6d9aef 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 9.3E-47 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_3042 1f8226b90f6ce614632a9850f24d13f9 337 SUPERFAMILY SSF53756 1 335 1.35E-63 T 12-10-2018 YpsIP31758_3042 1f8226b90f6ce614632a9850f24d13f9 337 Pfam PF13439 Glycosyltransferase Family 4 55 156 3.6E-17 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 YpsIP31758_3042 1f8226b90f6ce614632a9850f24d13f9 337 Pfam PF00534 Glycosyl transferases group 1 165 305 5.6E-23 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 YpsIP31758_3042 1f8226b90f6ce614632a9850f24d13f9 337 Gene3D G3DSA:3.40.50.2000 1 164 7.3E-17 T 12-10-2018 YpsIP31758_3042 1f8226b90f6ce614632a9850f24d13f9 337 Gene3D G3DSA:3.40.50.2000 165 335 4.5E-33 T 12-10-2018 YpsIP31758_3713 1d08dd6e3d0c376be3043dff11cce472 102 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 5 99 4.9E-32 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD YpsIP31758_3713 1d08dd6e3d0c376be3043dff11cce472 102 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 21 97 3.9E-25 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD YpsIP31758_3541 b77e344472656a6feb9b421dcf1452d6 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 356 2.8E-74 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 YpsIP31758_3541 b77e344472656a6feb9b421dcf1452d6 358 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 5.0E-139 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 YpsIP31758_2846 ebf52ca2ce5da50b22947b09da8b0aef 334 SUPERFAMILY SSF50974 5 291 3.01E-54 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 YpsIP31758_2846 ebf52ca2ce5da50b22947b09da8b0aef 334 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 9.0E-94 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller YpsIP31758_2846 ebf52ca2ce5da50b22947b09da8b0aef 334 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 58.26 T 12-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 YpsIP31758_2846 ebf52ca2ce5da50b22947b09da8b0aef 334 Gene3D G3DSA:2.130.10.10 1 334 1.9E-122 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_2127 d0eeb1f399316b150f83cfcc78dd6b01 236 Pfam PF13302 Acetyltransferase (GNAT) domain 49 174 2.6E-13 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_2127 d0eeb1f399316b150f83cfcc78dd6b01 236 Gene3D G3DSA:3.40.630.30 15 234 3.6E-56 T 12-10-2018 YpsIP31758_2127 d0eeb1f399316b150f83cfcc78dd6b01 236 SUPERFAMILY SSF55729 26 198 2.6E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3642 f4c2c050243932dd6271645fd1f134dd 103 Pfam PF07338 Protein of unknown function (DUF1471) 48 103 1.3E-16 T 12-10-2018 IPR010854 Domain of unknown function DUF1471 YpsIP31758_3642 f4c2c050243932dd6271645fd1f134dd 103 Gene3D G3DSA:3.30.1660.10 35 103 6.7E-14 T 12-10-2018 IPR025543 Dodecin-like YpsIP31758_3642 f4c2c050243932dd6271645fd1f134dd 103 SUPERFAMILY SSF159871 5 103 1.11E-20 T 12-10-2018 IPR036275 YdgH-like superfamily YpsIP31758_0379 b3bafea2d7cbd9579397c238e5ebf362 270 SMART SM00849 39 239 0.004 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_0379 b3bafea2d7cbd9579397c238e5ebf362 270 SUPERFAMILY SSF56281 31 243 1.01E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_0379 b3bafea2d7cbd9579397c238e5ebf362 270 Pfam PF00753 Metallo-beta-lactamase superfamily 41 204 2.5E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase YpsIP31758_0379 b3bafea2d7cbd9579397c238e5ebf362 270 Gene3D G3DSA:3.60.15.10 4 243 3.2E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YpsIP31758_3508 f561e424d03b84733008f3330d1c98d2 79 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 55 9.0E-24 T 12-10-2018 IPR009885 Protein of unknown function DUF1435 YpsIP31758_3508 f561e424d03b84733008f3330d1c98d2 79 Pfam PF07256 Protein of unknown function (DUF1435) 2 75 1.1E-32 T 12-10-2018 IPR009885 Protein of unknown function DUF1435 YpsIP31758_0724 f2893adabd0e96c6d89279b320aa8283 87 Pfam PF03811 InsA N-terminal domain 1 35 7.2E-15 T 12-10-2018 IPR003220 InsA N-terminal domain GO:0006313 YpsIP31758_0724 f2893adabd0e96c6d89279b320aa8283 87 Pfam PF12759 InsA C-terminal domain 42 86 2.7E-27 T 12-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.20.200.10 118 446 9.2E-159 T 12-10-2018 YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.9E-151 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.10.275.10 1 117 2.4E-53 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 12-10-2018 IPR000362 Fumarate lyase family YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 Pfam PF00206 Lyase 14 312 1.5E-78 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 SUPERFAMILY SSF48557 10 454 2.83E-105 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 7.6E-53 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 YpsIP31758_1610 138eee08e9f0a39a3c3075b6ade0339d 456 Gene3D G3DSA:1.10.40.30 382 445 9.2E-159 T 12-10-2018 YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.0E-144 T 12-10-2018 IPR004872 Lipoprotein NlpA family YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 Gene3D G3DSA:3.40.190.10 115 221 2.6E-101 T 12-10-2018 YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 PIRSF PIRSF002854 1 271 8.5E-105 T 12-10-2018 IPR004872 Lipoprotein NlpA family YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 Pfam PF03180 NLPA lipoprotein 33 271 7.3E-99 T 12-10-2018 IPR004872 Lipoprotein NlpA family YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 Gene3D G3DSA:3.40.190.10 34 265 2.6E-101 T 12-10-2018 YpsIP31758_1041 dfdeaf6ffbc29a20feef34b73dc835a6 271 SUPERFAMILY SSF53850 33 271 2.42E-83 T 12-10-2018 YpsIP31758_0544 c729730cb4b9116eb163155a5ddb4d8c 100 Gene3D G3DSA:3.30.70.100 1 100 2.1E-41 T 12-10-2018 YpsIP31758_0544 c729730cb4b9116eb163155a5ddb4d8c 100 SUPERFAMILY SSF54909 3 96 1.98E-32 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_0544 c729730cb4b9116eb163155a5ddb4d8c 100 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.7E-42 T 12-10-2018 IPR014910 Putative monooxygenase YdhR YpsIP31758_0716 afdb0d8f57676d25fd5e06a8362cf91c 277 Pfam PF00775 Dioxygenase 71 167 5.1E-8 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 YpsIP31758_0716 afdb0d8f57676d25fd5e06a8362cf91c 277 SUPERFAMILY SSF49482 43 261 1.31E-44 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YpsIP31758_0716 afdb0d8f57676d25fd5e06a8362cf91c 277 Gene3D G3DSA:2.60.130.10 7 224 1.0E-42 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YpsIP31758_0253 935cc1c3faa58082338f0f328f5bb800 228 SUPERFAMILY SSF49354 20 126 1.47E-7 T 12-10-2018 IPR008962 PapD-like superfamily YpsIP31758_0253 935cc1c3faa58082338f0f328f5bb800 228 Gene3D G3DSA:2.60.40.10 23 152 2.3E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_0253 935cc1c3faa58082338f0f328f5bb800 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 121 5.7E-5 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YpsIP31758_1821 3137afbf4b55322eaeb6880c8f056c89 192 Pfam PF04264 YceI-like domain 26 187 3.7E-40 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YpsIP31758_1821 3137afbf4b55322eaeb6880c8f056c89 192 SMART SM00867 25 189 1.9E-70 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YpsIP31758_1821 3137afbf4b55322eaeb6880c8f056c89 192 SUPERFAMILY SSF101874 23 189 7.32E-56 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YpsIP31758_1821 3137afbf4b55322eaeb6880c8f056c89 192 Gene3D G3DSA:2.40.128.110 24 191 9.1E-56 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YpsIP31758_1821 3137afbf4b55322eaeb6880c8f056c89 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 45.01 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI YpsIP31758_4164 349a564a2b6d0ef0fc6deed97eca1f2d 245 SUPERFAMILY SSF161098 17 226 1.19E-38 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_4164 349a564a2b6d0ef0fc6deed97eca1f2d 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 2.7E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_4164 349a564a2b6d0ef0fc6deed97eca1f2d 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 229 4.1E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4164 349a564a2b6d0ef0fc6deed97eca1f2d 245 Gene3D G3DSA:1.10.3720.10 7 241 5.6E-46 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 1.3E-128 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PIRSF PIRSF036480 6 282 5.4E-115 T 12-10-2018 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 Pfam PF01842 ACT domain 10 70 5.3E-7 T 12-10-2018 IPR002912 ACT domain YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 4.8E-67 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 Pfam PF00551 Formyl transferase 88 264 4.0E-53 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 Gene3D G3DSA:3.30.70.260 3 85 1.3E-15 T 12-10-2018 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 SUPERFAMILY SSF55021 9 58 2.42E-8 T 12-10-2018 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.545 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 Gene3D G3DSA:3.40.50.170 86 282 7.1E-67 T 12-10-2018 YpsIP31758_1971 482eb24139a2342b1c4f69b4d3acde8d 282 SUPERFAMILY SSF53328 88 281 1.44E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YpsIP31758_3746 f500f7b51480eb61b21b72e8585cc08b 548 SUPERFAMILY SSF110849 26 141 3.49E-9 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YpsIP31758_3746 f500f7b51480eb61b21b72e8585cc08b 548 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 16 279 7.5E-122 T 12-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB YpsIP31758_3746 f500f7b51480eb61b21b72e8585cc08b 548 Pfam PF02195 ParB-like nuclease domain 27 76 2.0E-4 T 12-10-2018 IPR003115 ParB/Sulfiredoxin YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-93 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.6E-58 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 6.1E-131 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 Pfam PF01578 Cytochrome C assembly protein 89 296 1.5E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YpsIP31758_1392 2c740773ba6408173d84b5c799ee9047 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 7.7E-282 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YpsIP31758_0519 ed7ed53b9e1a9aa0cb334340241fe98b 640 Pfam PF04829 Pre-toxin domain with VENN motif 334 383 4.7E-21 T 12-10-2018 IPR006914 VENN motif-containing domain YpsIP31758_0219 7b672f7ea603d7b2880a6060eeb6257b 206 Pfam PF01810 LysE type translocator 14 205 1.2E-50 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_0219 7b672f7ea603d7b2880a6060eeb6257b 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 7.7E-60 T 12-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 YpsIP31758_2816 a22336114a163b616f491b73ccce9168 108 Pfam PF07110 EthD domain 18 95 1.8E-15 T 12-10-2018 IPR009799 EthD domain YpsIP31758_2816 a22336114a163b616f491b73ccce9168 108 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 7 107 5.8E-33 T 12-10-2018 IPR009799 EthD domain YpsIP31758_2816 a22336114a163b616f491b73ccce9168 108 Gene3D G3DSA:3.30.70.100 6 103 2.2E-28 T 12-10-2018 YpsIP31758_2816 a22336114a163b616f491b73ccce9168 108 SUPERFAMILY SSF54909 7 104 1.84E-28 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_3073 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.1E-33 T 12-10-2018 IPR007985 Haemolysin expression modulating, HHA YpsIP31758_3073 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_3073 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 3.7E-37 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_3797 8c285babb60cbddacd1bc1dfcc7bc1bc 437 SMART SM00729 53 275 5.8E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_3797 8c285babb60cbddacd1bc1dfcc7bc1bc 437 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 7.4E-176 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW YpsIP31758_3797 8c285babb60cbddacd1bc1dfcc7bc1bc 437 Gene3D G3DSA:3.80.30.20 21 354 2.9E-85 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_3797 8c285babb60cbddacd1bc1dfcc7bc1bc 437 Pfam PF04055 Radical SAM superfamily 59 228 4.9E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_3797 8c285babb60cbddacd1bc1dfcc7bc1bc 437 SUPERFAMILY SSF102114 5 423 2.09E-90 T 12-10-2018 YpsIP31758_3774 ce7b8124ce755d69693635c9268585a0 174 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.273 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 YpsIP31758_3774 ce7b8124ce755d69693635c9268585a0 174 Pfam PF04345 Chorismate lyase 12 168 8.7E-34 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 YpsIP31758_3774 ce7b8124ce755d69693635c9268585a0 174 Gene3D G3DSA:3.40.1410.10 5 166 2.4E-51 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_3774 ce7b8124ce755d69693635c9268585a0 174 SUPERFAMILY SSF64288 8 166 4.37E-52 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YpsIP31758_2227 9224fbce0defa461809f1ae9adbe01ad 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 1.9E-13 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YpsIP31758_2227 9224fbce0defa461809f1ae9adbe01ad 94 Gene3D G3DSA:3.30.2310.20 1 94 2.1E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YpsIP31758_2227 9224fbce0defa461809f1ae9adbe01ad 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 81 8.9E-10 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YpsIP31758_2227 9224fbce0defa461809f1ae9adbe01ad 94 SUPERFAMILY SSF143011 1 82 4.45E-22 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YpsIP31758_2386 440bf91b0ce8157f136ac3cd84f7178d 79 ProDom PD060536 YECJ YPO1738 1 79 3.0E-39 T 12-10-2018 IPR020262 Uncharacterised protein family YecJ YpsIP31758_2386 440bf91b0ce8157f136ac3cd84f7178d 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.6E-48 T 12-10-2018 IPR020262 Uncharacterised protein family YecJ YpsIP31758_0220 195bb9d6ad617ff61b415348630e1e0b 206 Pfam PF01810 LysE type translocator 14 202 1.9E-46 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_0220 195bb9d6ad617ff61b415348630e1e0b 206 PIRSF PIRSF006324 1 205 4.0E-55 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 Pfam PF17287 POTRA domain 154 208 2.2E-20 T 12-10-2018 IPR035251 ShlB, POTRA domain YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 213 526 2.2E-108 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 Gene3D G3DSA:3.10.20.310 71 153 5.3E-8 T 12-10-2018 YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 Gene3D G3DSA:2.40.160.50 186 561 2.6E-100 T 12-10-2018 YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 3.8E-24 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type YpsIP31758_0509 6e28e12b2a0f39219bf140ada9e9cbad 562 PIRSF PIRSF029745 11 562 1.3E-158 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 YpsIP31758_2541 9213e2b5313b4c4819bc6249e8ae0042 402 SUPERFAMILY SSF53098 1 376 2.43E-70 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily YpsIP31758_2541 9213e2b5313b4c4819bc6249e8ae0042 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 PIRSF PIRSF001365 1 297 2.4E-66 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 Gene3D G3DSA:3.20.20.70 1 297 1.5E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 SUPERFAMILY SSF51569 1 292 2.3E-72 T 12-10-2018 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 SMART SM01130 3 294 1.1E-68 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 2.1E-51 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.0E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_1293 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.0E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 YpsIP31758_3259 e87a8fd65572cb426cfccccb4b77fac3 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 1.2E-97 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YpsIP31758_1858 5c67b657496ba0c655c22893a77e8ed8 151 Gene3D G3DSA:2.60.120.510 33 151 2.0E-82 T 12-10-2018 IPR036475 Mitogen Ypm superfamily YpsIP31758_1858 5c67b657496ba0c655c22893a77e8ed8 151 SUPERFAMILY SSF101606 35 151 1.57E-76 T 12-10-2018 IPR036475 Mitogen Ypm superfamily YpsIP31758_1858 5c67b657496ba0c655c22893a77e8ed8 151 Pfam PF09144 Yersinia pseudo-tuberculosis mitogen 35 151 1.3E-81 T 12-10-2018 IPR015227 Mitogen, Yersinia pseudotuberculosis YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 Pfam PF13488 Glycine zipper 38 85 3.4E-11 T 12-10-2018 IPR039567 Glycine zipper domain YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01021 OMPA domain signature 146 161 5.0E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01021 OMPA domain signature 161 177 5.0E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01021 OMPA domain signature 116 138 5.0E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 SUPERFAMILY SSF103088 103 218 6.15E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.4E-5 T 12-10-2018 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 2.4E-5 T 12-10-2018 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.4E-5 T 12-10-2018 YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 Gene3D G3DSA:3.30.1330.60 79 219 3.9E-51 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_4135 1f64d90d085c58df6f700cd8c5a11a62 219 Pfam PF00691 OmpA family 115 210 3.3E-21 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 503 3.9E-108 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 Pfam PF00854 POT family 91 465 2.3E-65 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 SUPERFAMILY SSF103473 336 500 8.24E-11 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 Gene3D G3DSA:1.20.1250.20 1 503 1.6E-158 T 12-10-2018 YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 SUPERFAMILY SSF103473 16 312 1.7E-25 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_1555 2ece47da496e965758d287474b26ddad 512 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 YpsIP31758_1346 4a1fdf63356f82c47dc937722538b704 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.2E-23 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_1346 4a1fdf63356f82c47dc937722538b704 159 SUPERFAMILY SSF141452 2 158 6.15E-36 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_1346 4a1fdf63356f82c47dc937722538b704 159 Gene3D G3DSA:2.30.110.20 2 158 3.2E-52 T 12-10-2018 IPR036624 Hcp1-like superfamily YpsIP31758_1346 4a1fdf63356f82c47dc937722538b704 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 4.7E-60 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp YpsIP31758_3739 907dc133aa370db354a4faaf89743a4a 143 Gene3D G3DSA:1.20.1220.20 1 143 5.8E-33 T 12-10-2018 YpsIP31758_3739 907dc133aa370db354a4faaf89743a4a 143 Pfam PF01724 Domain of unknown function DUF29 5 141 3.3E-46 T 12-10-2018 IPR002636 Protein from unkown function DUF29 YpsIP31758_4056 949bb331042dc71e25e10dbc824e7dc1 361 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 49 321 2.3E-121 T 12-10-2018 IPR005274 Inner membrane protein YhjD YpsIP31758_4056 949bb331042dc71e25e10dbc824e7dc1 361 PIRSF PIRSF035875 34 333 7.0E-24 T 12-10-2018 IPR017039 Virulence factor BrkB YpsIP31758_4056 949bb331042dc71e25e10dbc824e7dc1 361 Pfam PF03631 Virulence factor BrkB 63 320 1.7E-45 T 12-10-2018 IPR017039 Virulence factor BrkB YpsIP31758_2587 10ced6011bea23e54455784824eb097f 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 9.5E-80 T 12-10-2018 IPR003776 YcaO-like domain YpsIP31758_2587 10ced6011bea23e54455784824eb097f 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 8.4E-160 T 12-10-2018 IPR003776 YcaO-like domain YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 SMART SM00448 1 112 2.4E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 SMART SM00862 145 220 1.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 Gene3D G3DSA:3.40.50.2300 1 120 6.6E-40 T 12-10-2018 YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 SUPERFAMILY SSF52172 1 175 1.34E-38 T 12-10-2018 IPR011006 CheY-like superfamily YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 Gene3D G3DSA:1.10.10.10 123 223 5.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 Pfam PF00072 Response regulator receiver domain 3 112 3.4E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YpsIP31758_1608 6a1a8190fc03a3352209ff6fb17ddbb6 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 6.1E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_3767 4ac842e583554f79fd0efd627fb41598 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.0E-25 T 12-10-2018 IPR014318 Phage shock protein, PspG YpsIP31758_3767 4ac842e583554f79fd0efd627fb41598 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 7.7E-29 T 12-10-2018 IPR014318 Phage shock protein, PspG YpsIP31758_1730 52f0f05efb4bba759914e4a970d05ff5 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 31.696 T 12-10-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YpsIP31758_1730 52f0f05efb4bba759914e4a970d05ff5 114 Gene3D G3DSA:1.10.3730.20 1 113 2.2E-7 T 12-10-2018 YpsIP31758_1730 52f0f05efb4bba759914e4a970d05ff5 114 Pfam PF00892 EamA-like transporter family 33 111 4.6E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1730 52f0f05efb4bba759914e4a970d05ff5 114 SUPERFAMILY SSF103481 35 113 3.92E-14 T 12-10-2018 YpsIP31758_4060 a0eb67971f6e2db9420d9f6ce146d8fc 66 SUPERFAMILY SSF55331 2 64 2.4E-23 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily YpsIP31758_4060 a0eb67971f6e2db9420d9f6ce146d8fc 66 Pfam PF01361 Tautomerase enzyme 2 61 1.6E-24 T 12-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 YpsIP31758_4060 a0eb67971f6e2db9420d9f6ce146d8fc 66 Gene3D G3DSA:3.30.429.10 2 65 5.0E-27 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily YpsIP31758_4060 a0eb67971f6e2db9420d9f6ce146d8fc 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 3.6E-30 T 12-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 YpsIP31758_2012 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 87 5.9E-28 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 YpsIP31758_2012 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.9E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 YpsIP31758_2012 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 YpsIP31758_2012 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 YpsIP31758_2012 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 YpsIP31758_3690 d424f883f1d9c55fcdf64db8e3b295ef 323 PIRSF PIRSF037112 2 323 4.9E-124 T 12-10-2018 IPR017113 Antirestriction, ArdC YpsIP31758_3690 d424f883f1d9c55fcdf64db8e3b295ef 323 Pfam PF08401 Domain of unknown function (DUF1738) 15 143 1.3E-36 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 YpsIP31758_1853 4689c9f85053b238833e7dd43f5d8199 316 Gene3D G3DSA:3.40.50.2300 131 265 6.2E-75 T 12-10-2018 YpsIP31758_1853 4689c9f85053b238833e7dd43f5d8199 316 SUPERFAMILY SSF53822 32 308 1.14E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1853 4689c9f85053b238833e7dd43f5d8199 316 Pfam PF13407 Periplasmic binding protein domain 32 285 2.1E-51 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_1853 4689c9f85053b238833e7dd43f5d8199 316 Gene3D G3DSA:3.40.50.2300 38 284 6.2E-75 T 12-10-2018 YpsIP31758_2143 027271c28473b904620620244292531b 335 SUPERFAMILY SSF56601 24 326 2.72E-100 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YpsIP31758_2143 027271c28473b904620620244292531b 335 Gene3D G3DSA:3.40.710.10 21 328 1.5E-101 T 12-10-2018 YpsIP31758_2143 027271c28473b904620620244292531b 335 TIGRFAM TIGR03814 Gln_ase: glutaminase A 27 326 1.3E-100 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_2143 027271c28473b904620620244292531b 335 Pfam PF04960 Glutaminase 42 326 1.9E-95 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_2143 027271c28473b904620620244292531b 335 Hamap MF_00313 Glutaminase [glsA]. 24 326 40.831 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 YpsIP31758_0633 d3c207dc585fe981331f86f963af85e1 238 Pfam PF02108 Flagellar assembly protein FliH 100 223 3.6E-29 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YpsIP31758_0633 d3c207dc585fe981331f86f963af85e1 238 Pfam PF09811 Essential protein Yae1, N terminal 49 86 1.9E-9 T 12-10-2018 IPR019191 Essential protein Yae1, N-terminal YpsIP31758_0573 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Gene3D G3DSA:1.20.1600.10 23 447 2.6E-144 T 12-10-2018 YpsIP31758_0573 ce0209c5fe27ec9c7a9408ce6561b1ad 464 SUPERFAMILY SSF56954 25 441 2.35E-93 T 12-10-2018 YpsIP31758_0573 ce0209c5fe27ec9c7a9408ce6561b1ad 464 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 440 9.6E-130 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 YpsIP31758_0573 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Pfam PF02321 Outer membrane efflux protein 25 210 1.3E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_0573 ce0209c5fe27ec9c7a9408ce6561b1ad 464 Pfam PF02321 Outer membrane efflux protein 233 424 8.1E-34 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YpsIP31758_3409 6eb2b498455d7d4445ece88759d2a9ae 393 Gene3D G3DSA:1.20.1250.20 207 392 1.1E-18 T 12-10-2018 YpsIP31758_3409 6eb2b498455d7d4445ece88759d2a9ae 393 Gene3D G3DSA:1.20.1250.20 11 199 9.6E-21 T 12-10-2018 YpsIP31758_3409 6eb2b498455d7d4445ece88759d2a9ae 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 2.2E-159 T 12-10-2018 IPR004750 Sugar efflux GO:0005351|GO:0008643|GO:0016021 YpsIP31758_3409 6eb2b498455d7d4445ece88759d2a9ae 393 SUPERFAMILY SSF103473 10 390 2.88E-48 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3409 6eb2b498455d7d4445ece88759d2a9ae 393 Pfam PF07690 Major Facilitator Superfamily 19 346 1.1E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_1856 d584b9e65a446a4a3ea6603f0934a91c 484 Pfam PF03553 Na+/H+ antiporter family 159 463 3.6E-55 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YpsIP31758_1856 d584b9e65a446a4a3ea6603f0934a91c 484 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 469 7.6E-156 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 YpsIP31758_1779 aa21e22137e4951840901c78d0c6853d 426 Gene3D G3DSA:1.20.1290.10 125 231 1.6E-5 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_1779 aa21e22137e4951840901c78d0c6853d 426 Gene3D G3DSA:1.20.1290.10 309 426 2.4E-21 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_1779 aa21e22137e4951840901c78d0c6853d 426 SUPERFAMILY SSF69118 92 229 2.45E-12 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_1779 aa21e22137e4951840901c78d0c6853d 426 SUPERFAMILY SSF69118 282 425 3.99E-22 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_0097 0a0798bf79b79efd697e78a76f4169d8 204 Pfam PF07305 Protein of unknown function (DUF1454) 11 203 8.8E-84 T 12-10-2018 IPR009918 Protein of unknown function DUF1454 YpsIP31758_2336 d10e148b86965c4c69cd2422054acef7 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 9.4E-44 T 12-10-2018 IPR010862 Protein of unknown function DUF1493 YpsIP31758_0210 7d5ce74efd1036fad7365e3c86cb05c5 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 1.1E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_0210 7d5ce74efd1036fad7365e3c86cb05c5 221 SUPERFAMILY SSF46689 19 80 1.94E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_0210 7d5ce74efd1036fad7365e3c86cb05c5 221 Gene3D G3DSA:1.10.357.10 14 171 2.2E-12 T 12-10-2018 YpsIP31758_3792 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.40.50.1000 49 234 1.9E-6 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_3792 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.90.1070.10 111 194 1.9E-6 T 12-10-2018 YpsIP31758_3792 ac4ea9327af411006912b6dfef7d1fa7 270 SUPERFAMILY SSF56784 1 238 4.81E-17 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_3792 ac4ea9327af411006912b6dfef7d1fa7 270 PIRSF PIRSF030802 1 257 7.2E-145 T 12-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 YpsIP31758_0451 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:3.10.450.710 21 201 7.7E-41 T 12-10-2018 YpsIP31758_0451 5f5ddb2b6235c3518023b5c37c15cf47 207 Pfam PF05494 MlaC protein 31 195 8.5E-52 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YpsIP31758_0451 5f5ddb2b6235c3518023b5c37c15cf47 207 PIRSF PIRSF004649 1 207 2.6E-58 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YpsIP31758_2365 6244726f58d9cdc11416b4ebc4c794bb 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 1.9E-31 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YpsIP31758_2365 6244726f58d9cdc11416b4ebc4c794bb 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 5.0E-71 T 12-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 YpsIP31758_2365 6244726f58d9cdc11416b4ebc4c794bb 210 Gene3D G3DSA:3.90.850.10 1 208 4.6E-45 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2365 6244726f58d9cdc11416b4ebc4c794bb 210 SUPERFAMILY SSF56529 2 204 3.01E-51 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_1898 41402bd4b96a783866a8aee555029b9a 351 Pfam PF03116 NQR2, RnfD, RnfE family 3 345 9.1E-109 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 YpsIP31758_1898 41402bd4b96a783866a8aee555029b9a 351 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 346 1.1E-140 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 YpsIP31758_1898 41402bd4b96a783866a8aee555029b9a 351 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 347 28.396 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 YpsIP31758_3021 24d9087d538fa2ca68a254d888093b5d 211 Gene3D G3DSA:3.40.50.1110 27 210 9.8E-72 T 12-10-2018 IPR036514 SGNH hydrolase superfamily YpsIP31758_3021 24d9087d538fa2ca68a254d888093b5d 211 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 YpsIP31758_3021 24d9087d538fa2ca68a254d888093b5d 211 SUPERFAMILY SSF52266 29 206 9.58E-50 T 12-10-2018 YpsIP31758_3021 24d9087d538fa2ca68a254d888093b5d 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 190 2.9E-24 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 Pfam PF04266 ASCH domain 6 92 3.4E-13 T 12-10-2018 IPR007374 ASCH domain YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 SUPERFAMILY SSF88697 2 100 5.3E-31 T 12-10-2018 IPR015947 PUA-like superfamily YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 PIRSF PIRSF029143 1 102 8.3E-49 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 Gene3D G3DSA:2.30.130.30 1 102 1.9E-42 T 12-10-2018 YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.61 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 YpsIP31758_2348 8a771f8c88b18e4272932d4a91d6821f 102 SMART SM01022 5 101 3.1E-24 T 12-10-2018 IPR007374 ASCH domain YpsIP31758_2850 ac4de76645876135c98894a466816851 259 PIRSF PIRSF004846 2 259 1.4E-77 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 YpsIP31758_2850 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 32 256 4.8E-86 T 12-10-2018 YpsIP31758_2850 ac4de76645876135c98894a466816851 259 Pfam PF13531 Bacterial extracellular solute-binding protein 31 256 7.4E-46 T 12-10-2018 YpsIP31758_2850 ac4de76645876135c98894a466816851 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 255 1.7E-79 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 YpsIP31758_2850 ac4de76645876135c98894a466816851 259 SUPERFAMILY SSF53850 29 258 1.14E-68 T 12-10-2018 YpsIP31758_2850 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 109 220 4.8E-86 T 12-10-2018 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 Gene3D G3DSA:3.40.718.10 1 361 5.8E-143 T 12-10-2018 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 1.7E-81 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 358 1.7E-165 T 12-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 SUPERFAMILY SSF53659 2 359 1.92E-112 T 12-10-2018 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 SMART SM01329 6 355 9.6E-168 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1512 83da8910c41c8663e0c0d9c03e37e4d0 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 YpsIP31758_1256 0130fd972b2e1987561ffd590eb1e807 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 124 2.1E-42 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR YpsIP31758_1256 0130fd972b2e1987561ffd590eb1e807 132 SUPERFAMILY SSF52833 11 123 6.86E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1256 0130fd972b2e1987561ffd590eb1e807 132 Gene3D G3DSA:3.40.30.10 9 124 5.5E-40 T 12-10-2018 YpsIP31758_1256 0130fd972b2e1987561ffd590eb1e807 132 Pfam PF03960 ArsC family 13 122 1.9E-14 T 12-10-2018 IPR006660 Arsenate reductase-like YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 4.3E-208 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 Pfam PF07690 Major Facilitator Superfamily 18 412 5.4E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 12-10-2018 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 12-10-2018 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 12-10-2018 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 12-10-2018 YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 10 499 2.49E-72 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_3202 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1720.10 14 219 2.4E-47 T 12-10-2018 YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 PIRSF PIRSF039085 1 241 4.0E-105 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 SMART SM00382 26 213 7.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 Gene3D G3DSA:3.40.50.300 1 240 1.7E-76 T 12-10-2018 YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 Pfam PF00005 ABC transporter 18 165 6.8E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2923 d2f481ccbf5cb38f40e104270021ca8d 241 SUPERFAMILY SSF52540 1 235 3.17E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1337 d86ddad3fa31da20af89b6011764dfb5 223 Gene3D G3DSA:3.40.50.10610 62 223 2.0E-5 T 12-10-2018 YpsIP31758_1337 d86ddad3fa31da20af89b6011764dfb5 223 Pfam PF03783 Curli production assembly/transport component CsgG 43 221 1.6E-33 T 12-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 YpsIP31758_1337 d86ddad3fa31da20af89b6011764dfb5 223 SUPERFAMILY SSF52964 44 144 6.93E-9 T 12-10-2018 YpsIP31758_0776 42f3b60515cf5e9e86e28847c495ea73 85 Pfam PF06069 PerC transcriptional activator 15 66 1.9E-11 T 12-10-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 YpsIP31758_0776 42f3b60515cf5e9e86e28847c495ea73 85 ProDom PD063034 PERC TRANSCRIPTIONAL PLASMID REGULATOR BFPW ACTIVATOR TRANSCRIPTION DNA-BINDING REGULATION LDAB 10 60 0.002 T 12-10-2018 IPR009277 PerC transcriptional activator YpsIP31758_2239 d521f8b47862e916ffb87d3c4acecff2 148 Pfam PF06530 Phage antitermination protein Q 17 137 8.3E-39 T 12-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YpsIP31758_1174 3f1acae0c03d6c2c75336c06528ff002 66 PIRSF PIRSF039003 3 66 1.2E-32 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YpsIP31758_1174 3f1acae0c03d6c2c75336c06528ff002 66 Gene3D G3DSA:1.10.10.600 1 66 2.9E-31 T 12-10-2018 IPR036762 IscX-like superfamily YpsIP31758_1174 3f1acae0c03d6c2c75336c06528ff002 66 SUPERFAMILY SSF140319 3 64 4.84E-27 T 12-10-2018 IPR036762 IscX-like superfamily YpsIP31758_1174 3f1acae0c03d6c2c75336c06528ff002 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.6E-32 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YpsIP31758_1174 3f1acae0c03d6c2c75336c06528ff002 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.0E-33 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YpsIP31758_3223 d7311382eecbf0a3acc726fb46f771de 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 2.0E-56 T 12-10-2018 IPR007433 Protein of unknown function DUF481 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 PIRSF PIRSF001356 1 263 1.7E-157 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 SUPERFAMILY SSF56276 43 173 9.02E-23 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 2.1E-148 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 4.4E-29 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 Gene3D G3DSA:3.60.90.10 95 185 5.3E-6 T 12-10-2018 YpsIP31758_3355 58bb3b157f2de78720ef68a65a0c67d1 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 177.52 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 YpsIP31758_2592 25e2d16c9f5fbe407b96ed619f2049de 382 Pfam PF07690 Major Facilitator Superfamily 11 299 4.4E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_2592 25e2d16c9f5fbe407b96ed619f2049de 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 35.882 T 12-10-2018 IPR023745 MSF-type transporter, YcaD YpsIP31758_2592 25e2d16c9f5fbe407b96ed619f2049de 382 SUPERFAMILY SSF103473 6 371 3.79E-43 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2592 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 3 187 5.1E-20 T 12-10-2018 YpsIP31758_2592 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 196 378 2.3E-17 T 12-10-2018 YpsIP31758_1026 89e2bb4a240f157a1d04fbd38e1cd106 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.183 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 YpsIP31758_1026 89e2bb4a240f157a1d04fbd38e1cd106 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 15 391 1.4E-171 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 YpsIP31758_1026 89e2bb4a240f157a1d04fbd38e1cd106 394 SUPERFAMILY SSF53756 20 357 1.75E-24 T 12-10-2018 YpsIP31758_1026 89e2bb4a240f157a1d04fbd38e1cd106 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 3.6E-142 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 YpsIP31758_1438 12e4eff9b6fe0e7a3e7602564fb68ebe 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 3.8E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YpsIP31758_1438 12e4eff9b6fe0e7a3e7602564fb68ebe 95 Gene3D G3DSA:3.40.50.2300 1 90 1.1E-19 T 12-10-2018 YpsIP31758_1438 12e4eff9b6fe0e7a3e7602564fb68ebe 95 SUPERFAMILY SSF52794 1 89 7.06E-20 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 YpsIP31758_0983 b83e57b0876766d6b8765828fbccbc68 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 4.0E-106 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YpsIP31758_0983 b83e57b0876766d6b8765828fbccbc68 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 3.3E-80 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YpsIP31758_0983 b83e57b0876766d6b8765828fbccbc68 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.37 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YpsIP31758_0983 b83e57b0876766d6b8765828fbccbc68 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YpsIP31758_0085 d51b23831703fcf0a70c52f3025c4843 162 PIRSF PIRSF034445 1 152 6.9E-33 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 YpsIP31758_0085 d51b23831703fcf0a70c52f3025c4843 162 Gene3D G3DSA:1.20.120.1490 47 155 4.7E-40 T 12-10-2018 YpsIP31758_0085 d51b23831703fcf0a70c52f3025c4843 162 Pfam PF07813 LTXXQ motif family protein 45 142 2.5E-23 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 SMART SM00671 484 519 14.0 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 SMART SM00671 346 377 140.0 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 SMART SM00671 624 660 320.0 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 SMART SM00671 415 451 8.5 T 12-10-2018 IPR006597 Sel1-like repeat YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 Pfam PF13226 Domain of unknown function (DUF4034) 31 309 1.8E-112 T 12-10-2018 IPR025115 Domain of unknown function DUF4034 YpsIP31758_2096 b56bff30c843eb08ff1bcce48e51e181 703 SUPERFAMILY SSF81901 343 519 3.53E-10 T 12-10-2018 YpsIP31758_2081 a74997b3c54783d1f49474eff3f94104 128 Gene3D G3DSA:3.40.50.360 32 128 3.8E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 Pfam PF00574 Clp protease 25 205 2.1E-88 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 SUPERFAMILY SSF52096 23 206 8.08E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.5E-108 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 43.839 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.4E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.4E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.4E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.4E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.4E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YpsIP31758_3092 362ac2313fc273dfaa85f46876b919bc 207 Gene3D G3DSA:3.90.226.10 6 207 8.2E-84 T 12-10-2018 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 SUPERFAMILY SSF103088 56 167 5.1E-34 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 Pfam PF00691 OmpA family 67 162 7.7E-21 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 168 31.689 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 Gene3D G3DSA:3.30.1330.60 39 168 1.3E-47 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 113 129 4.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 68 90 4.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 PRINTS PR01021 OMPA domain signature 98 113 4.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_2867 9d8178f473e966de54b66cded8e89374 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 7.8E-46 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 SUPERFAMILY SSF48179 170 291 4.76E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 PIRSF PIRSF000103 1 296 6.6E-62 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 167 5.2E-37 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 SUPERFAMILY SSF51735 5 168 5.47E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 Gene3D G3DSA:1.10.1040.10 174 294 7.9E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 291 6.2E-38 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 YpsIP31758_0380 a04eeb54b7b72c2d2466691bae4829a5 296 Gene3D G3DSA:3.40.50.720 5 173 9.8E-43 T 12-10-2018 YpsIP31758_0445 9e2c20bd46ee3d10fe826b7d9761d384 187 Gene3D G3DSA:3.40.50.1000 2 187 8.9E-59 T 12-10-2018 IPR023214 HAD superfamily YpsIP31758_0445 9e2c20bd46ee3d10fe826b7d9761d384 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 4.9E-69 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_0445 9e2c20bd46ee3d10fe826b7d9761d384 187 PIRSF PIRSF006118 12 187 1.2E-72 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_0445 9e2c20bd46ee3d10fe826b7d9761d384 187 SUPERFAMILY SSF56784 21 179 2.93E-41 T 12-10-2018 IPR036412 HAD-like superfamily YpsIP31758_0445 9e2c20bd46ee3d10fe826b7d9761d384 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 157 3.4E-10 T 12-10-2018 YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 SMART SM00851 25 118 1.3E-26 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.559 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 SUPERFAMILY SSF52335 6 150 7.59E-57 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 Pfam PF02142 MGS-like domain 27 118 2.0E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.0E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 Gene3D G3DSA:3.40.50.1380 1 152 4.5E-67 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 PIRSF PIRSF006614 8 151 1.4E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YpsIP31758_2535 e473a9e575f6fb3d87bfb9bc6308449d 154 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 PRINTS PR00207 Flagellin signature 76 95 3.4E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 PRINTS PR00207 Flagellin signature 37 54 3.4E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 PRINTS PR00207 Flagellin signature 111 134 3.4E-13 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 Gene3D G3DSA:3.30.70.2120 174 294 1.0E-50 T 12-10-2018 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 SUPERFAMILY SSF64518 1 396 4.18E-69 T 12-10-2018 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.1E-28 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 Gene3D G3DSA:1.20.1330.10 45 346 1.0E-50 T 12-10-2018 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 312 394 6.4E-16 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YpsIP31758_0653 490fb8fe38ba1ca4e0bb955eeba71067 397 Gene3D G3DSA:1.10.8.410 347 396 9.1E-10 T 12-10-2018 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 Gene3D G3DSA:3.40.367.20 100 299 9.6E-119 T 12-10-2018 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 Gene3D G3DSA:3.30.420.40 6 308 9.6E-119 T 12-10-2018 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 SUPERFAMILY SSF53067 4 318 1.02E-64 T 12-10-2018 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 Pfam PF02685 Glucokinase 6 315 2.3E-126 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 TIGRFAM TIGR00749 glk: glucokinase 6 310 7.1E-139 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YpsIP31758_1332 93073811fce8a5b3985d266f1434d9c1 323 Hamap MF_00524 Glucokinase [glk]. 4 316 36.055 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YpsIP31758_3989 ad401ba1a963b57f1984f4d6a7a1da9a 233 SUPERFAMILY SSF53271 46 231 1.31E-33 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like YpsIP31758_3989 ad401ba1a963b57f1984f4d6a7a1da9a 233 Gene3D G3DSA:3.40.50.2020 110 232 8.4E-17 T 12-10-2018 YpsIP31758_3989 ad401ba1a963b57f1984f4d6a7a1da9a 233 Pfam PF00156 Phosphoribosyl transferase domain 143 229 3.1E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YpsIP31758_0471 7d3d041cd3f6a9477801116a0c27f203 241 SUPERFAMILY SSF53955 51 231 1.27E-61 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_0471 7d3d041cd3f6a9477801116a0c27f203 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 230 5.4E-83 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_0471 7d3d041cd3f6a9477801116a0c27f203 241 Gene3D G3DSA:1.10.3810.10 53 239 1.9E-53 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_0471 7d3d041cd3f6a9477801116a0c27f203 241 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 10 232 39.335 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_0471 7d3d041cd3f6a9477801116a0c27f203 241 Pfam PF00912 Transglycosylase 60 227 4.8E-51 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YpsIP31758_3164 3742a2467a86fe6764617ecf3112f62f 266 SMART SM00900 151 249 1.4E-36 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 YpsIP31758_3164 3742a2467a86fe6764617ecf3112f62f 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 3.7E-101 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 YpsIP31758_3164 3742a2467a86fe6764617ecf3112f62f 266 Pfam PF04205 FMN-binding domain 151 246 7.9E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 YpsIP31758_3164 3742a2467a86fe6764617ecf3112f62f 266 PIRSF PIRSF009437 2 264 3.1E-101 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 YpsIP31758_3164 3742a2467a86fe6764617ecf3112f62f 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.551 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 YpsIP31758_2779 d2bb2886a7072ed5a1eb01152fb35680 296 SUPERFAMILY SSF103481 45 146 6.02E-12 T 12-10-2018 YpsIP31758_2779 d2bb2886a7072ed5a1eb01152fb35680 296 Pfam PF00892 EamA-like transporter family 16 144 2.9E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2779 d2bb2886a7072ed5a1eb01152fb35680 296 Pfam PF00892 EamA-like transporter family 154 287 5.4E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2779 d2bb2886a7072ed5a1eb01152fb35680 296 SUPERFAMILY SSF103481 187 290 9.55E-13 T 12-10-2018 YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 278 1.6E-85 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 SUPERFAMILY SSF47240 10 323 3.02E-105 T 12-10-2018 IPR009078 Ferritin-like superfamily YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 1.2E-144 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 PIRSF PIRSF000355 5 320 1.1E-81 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YpsIP31758_1062 af1f68476761a7be8767394a91a4a02b 323 Gene3D G3DSA:1.10.620.20 6 292 1.5E-114 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 YpsIP31758_2000 22bf046cd0f6e5c99a2f645edc43ae78 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 7.7E-282 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YpsIP31758_2000 22bf046cd0f6e5c99a2f645edc43ae78 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 2.3E-280 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YpsIP31758_2000 22bf046cd0f6e5c99a2f645edc43ae78 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 367.961 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YpsIP31758_1909 824ebe1eafc90d1c7d3606d3eb2a56f8 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 1.8E-26 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 YpsIP31758_3657 23d963fa0164d10f87d5624d2bc70888 156 SUPERFAMILY SSF52540 29 148 1.9E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3657 23d963fa0164d10f87d5624d2bc70888 156 Gene3D G3DSA:3.40.50.300 1 153 4.0E-47 T 12-10-2018 YpsIP31758_3657 23d963fa0164d10f87d5624d2bc70888 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 5.8E-51 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YpsIP31758_3657 23d963fa0164d10f87d5624d2bc70888 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 131 4.7E-41 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YpsIP31758_3685 93ea560bc63585b895ee6eca404dd2d5 191 Gene3D G3DSA:1.10.357.10 1 183 1.2E-27 T 12-10-2018 YpsIP31758_3685 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF46689 3 66 8.72E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_3685 93ea560bc63585b895ee6eca404dd2d5 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 3.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YpsIP31758_3685 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF48498 74 157 6.67E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.2E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.2E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 Pfam PF00293 NUDIX domain 4 114 8.2E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 Gene3D G3DSA:3.90.79.10 1 148 5.6E-44 T 12-10-2018 YpsIP31758_1613 f83bb05397aabcb69ba1e444e3e141d4 148 SUPERFAMILY SSF55811 2 132 5.42E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_3773 b19d8b005f37562567c645ab628c107a 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site YpsIP31758_3773 b19d8b005f37562567c645ab628c107a 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 2.0E-111 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 YpsIP31758_3773 b19d8b005f37562567c645ab628c107a 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.407 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 YpsIP31758_3773 b19d8b005f37562567c645ab628c107a 288 Pfam PF01040 UbiA prenyltransferase family 28 270 4.9E-67 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 YpsIP31758_3773 b19d8b005f37562567c645ab628c107a 288 Gene3D G3DSA:1.10.357.140 23 183 1.9E-41 T 12-10-2018 YpsIP31758_0594 8c41ddb53148bd0e376baac73132a3f4 190 Pfam PF16964 Putative tight adherence pilin protein F 8 190 4.4E-40 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F YpsIP31758_3701 244129d02e64621f2e73ea3e30ac3e43 317 Pfam PF06834 TraU protein 34 308 4.4E-70 T 12-10-2018 IPR009649 TraU YpsIP31758_3701 244129d02e64621f2e73ea3e30ac3e43 317 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 27 316 4.0E-130 T 12-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.3E-47 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 PIRSF PIRSF006246 1 125 1.2E-52 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 SUPERFAMILY SSF50692 1 115 2.86E-46 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-65 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 Gene3D G3DSA:2.40.40.20 1 126 6.6E-54 T 12-10-2018 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 4.8E-60 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YpsIP31758_3345 7806a45f612c60697b27ed7cc6678492 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.86 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YpsIP31758_B0067 e0bdb93910223419aa0152060c86bf88 192 SUPERFAMILY SSF52218 1 149 3.46E-20 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_B0067 e0bdb93910223419aa0152060c86bf88 192 Pfam PF03358 NADPH-dependent FMN reductase 1 143 8.8E-18 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YpsIP31758_B0067 e0bdb93910223419aa0152060c86bf88 192 Gene3D G3DSA:3.40.50.360 1 182 9.1E-22 T 12-10-2018 IPR029039 Flavoprotein-like superfamily YpsIP31758_1691 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF161098 50 273 1.1E-58 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1691 bd7bf8930dab033b662994f9233a31d0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 275 1.1E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1691 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF160964 4 39 6.41E-5 T 12-10-2018 YpsIP31758_1691 bd7bf8930dab033b662994f9233a31d0 296 Gene3D G3DSA:1.10.3720.10 46 284 1.2E-66 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 SUPERFAMILY SSF53850 21 517 3.44E-97 T 12-10-2018 YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 Gene3D G3DSA:3.10.105.10 283 498 6.6E-94 T 12-10-2018 YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 PIRSF PIRSF002741 11 519 2.0E-61 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 Gene3D G3DSA:3.40.190.10 202 508 6.6E-94 T 12-10-2018 YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 440 1.5E-63 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain YpsIP31758_3551 b8f52370fa58f47fc99c246f155453d5 522 Gene3D G3DSA:3.90.76.10 41 201 6.6E-94 T 12-10-2018 YpsIP31758_2341 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 Gene3D G3DSA:1.20.1260.10 1 168 4.0E-49 T 12-10-2018 IPR012347 Ferritin-like YpsIP31758_2341 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 Pfam PF00210 Ferritin-like domain 8 143 2.4E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YpsIP31758_2341 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 SUPERFAMILY SSF47240 1 159 1.39E-57 T 12-10-2018 IPR009078 Ferritin-like superfamily YpsIP31758_2662 483b338ee37206366d6df49fc14d7b81 274 Gene3D G3DSA:3.40.190.10 32 267 2.0E-88 T 12-10-2018 YpsIP31758_2662 483b338ee37206366d6df49fc14d7b81 274 Pfam PF03180 NLPA lipoprotein 32 269 5.1E-78 T 12-10-2018 IPR004872 Lipoprotein NlpA family YpsIP31758_2662 483b338ee37206366d6df49fc14d7b81 274 Gene3D G3DSA:3.40.190.10 111 219 2.0E-88 T 12-10-2018 YpsIP31758_2662 483b338ee37206366d6df49fc14d7b81 274 PIRSF PIRSF002854 1 271 3.5E-97 T 12-10-2018 IPR004872 Lipoprotein NlpA family YpsIP31758_2662 483b338ee37206366d6df49fc14d7b81 274 SUPERFAMILY SSF53850 32 270 5.07E-67 T 12-10-2018 YpsIP31758_2680 9991e3c8c8b813deba1212e854329697 214 SUPERFAMILY SSF46894 6 92 5.39E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_2680 9991e3c8c8b813deba1212e854329697 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 20 91 6.7E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_2680 9991e3c8c8b813deba1212e854329697 214 SMART SM00862 18 92 1.5E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YpsIP31758_2680 9991e3c8c8b813deba1212e854329697 214 Gene3D G3DSA:1.10.10.10 3 93 2.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0747 506e5f432c00f7d1d700898958853623 106 Gene3D G3DSA:3.30.450.20 15 106 9.7E-42 T 12-10-2018 YpsIP31758_0747 506e5f432c00f7d1d700898958853623 106 SUPERFAMILY SSF143737 3 106 1.24E-47 T 12-10-2018 IPR038025 Antitoxin CbeA superfamily YpsIP31758_0747 506e5f432c00f7d1d700898958853623 106 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 10 106 1.0E-43 T 12-10-2018 IPR009320 Antitoxin CbeA GO:0051495 YpsIP31758_2028 efcf16c55e2839a451b6d41e616487e4 253 Pfam PF00005 ABC transporter 21 150 5.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_2028 efcf16c55e2839a451b6d41e616487e4 253 SMART SM00382 30 200 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_2028 efcf16c55e2839a451b6d41e616487e4 253 Gene3D G3DSA:3.40.50.300 3 242 3.0E-58 T 12-10-2018 YpsIP31758_2028 efcf16c55e2839a451b6d41e616487e4 253 SUPERFAMILY SSF52540 3 219 8.89E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3824 9597b8da4185ca8856d40ea3274ebf28 81 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 43 81 2.0E-22 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.253 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.6E-63 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 Gene3D G3DSA:3.40.50.300 1 210 1.7E-63 T 12-10-2018 YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 SUPERFAMILY SSF52540 1 208 3.1E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1583 229a3044ad45cbd84b33bcd425b5ecf9 212 Pfam PF02223 Thymidylate kinase 8 198 3.2E-61 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 Pfam PF01226 Formate/nitrite transporter 15 276 8.9E-76 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 Gene3D G3DSA:1.20.1080.10 1 268 2.9E-104 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.7E-129 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 1.0E-92 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2588 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site YpsIP31758_3826 088530e06a9f075ffde068419e75bd7a 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 2.4E-31 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 YpsIP31758_3826 088530e06a9f075ffde068419e75bd7a 71 SUPERFAMILY SSF140129 1 67 8.11E-18 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 YpsIP31758_3826 088530e06a9f075ffde068419e75bd7a 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 5.7E-21 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 YpsIP31758_4081 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Pfam PF00884 Sulfatase 250 538 1.1E-39 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YpsIP31758_4081 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Pfam PF08019 Domain of unknown function (DUF1705) 56 221 1.4E-19 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 YpsIP31758_4081 ce6b3a076f7eead4a3e9c0f02aea21d6 563 Gene3D G3DSA:3.40.720.10 244 554 1.1E-55 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YpsIP31758_4081 ce6b3a076f7eead4a3e9c0f02aea21d6 563 SUPERFAMILY SSF53649 250 546 3.74E-15 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YpsIP31758_0503 8331ad07dd30540265a234e7a88a2c23 499 SUPERFAMILY SSF56112 145 268 2.43E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_0503 8331ad07dd30540265a234e7a88a2c23 499 Gene3D G3DSA:1.10.510.10 125 350 2.8E-15 T 12-10-2018 YpsIP31758_0503 8331ad07dd30540265a234e7a88a2c23 499 Pfam PF00069 Protein kinase domain 151 314 3.1E-10 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YpsIP31758_0503 8331ad07dd30540265a234e7a88a2c23 499 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 167 179 - T 12-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 YpsIP31758_0503 8331ad07dd30540265a234e7a88a2c23 499 SMART SM00220 16 352 0.0051 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YpsIP31758_1736 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 2.2E-73 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 YpsIP31758_1736 3491a9fe4a1d6d827de8fbe40d9db6cf 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 12-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 YpsIP31758_1736 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.599 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein YpsIP31758_3047 5db9aeafd0a98622d09e126f1ab076cf 427 Gene3D G3DSA:3.50.50.60 5 427 7.6E-96 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3047 5db9aeafd0a98622d09e126f1ab076cf 427 SUPERFAMILY SSF51905 13 294 5.5E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YpsIP31758_3047 5db9aeafd0a98622d09e126f1ab076cf 427 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 79 1.1E-7 T 12-10-2018 YpsIP31758_3988 8607cac34339f5ddfbcf98a94f3369f4 258 Gene3D G3DSA:3.40.50.1820 1 255 1.3E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3988 8607cac34339f5ddfbcf98a94f3369f4 258 SUPERFAMILY SSF53474 3 252 5.73E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3988 8607cac34339f5ddfbcf98a94f3369f4 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 2.4E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YpsIP31758_3988 8607cac34339f5ddfbcf98a94f3369f4 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.43 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 YpsIP31758_3988 8607cac34339f5ddfbcf98a94f3369f4 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.4E-100 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 YpsIP31758_3544 5d15f456f2bcae339189ac616dad4869 149 Gene3D G3DSA:3.40.50.10110 1 146 2.7E-51 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily YpsIP31758_3544 5d15f456f2bcae339189ac616dad4869 149 SUPERFAMILY SSF102400 1 143 9.55E-48 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily YpsIP31758_3544 5d15f456f2bcae339189ac616dad4869 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.9E-39 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YpsIP31758_3708 1f450afef79bac85a460cd852a9af944 288 Pfam PF11920 Protein of unknown function (DUF3438) 7 275 2.3E-105 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 YpsIP31758_3708 1f450afef79bac85a460cd852a9af944 288 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 10 267 7.0E-103 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 YpsIP31758_2337 ec62b062abcbe2c8a285fc6e63443244 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 4.0E-45 T 12-10-2018 IPR019648 Protein of unknown function DUF2511 YpsIP31758_1462 b65d7d1ca69076ddb0364b64161c8d8d 181 Gene3D G3DSA:1.20.120.1200 1 159 1.2E-47 T 12-10-2018 YpsIP31758_1462 b65d7d1ca69076ddb0364b64161c8d8d 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 4.5E-33 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YpsIP31758_0369 871305680bd53303a84fb68e338c73fb 201 SUPERFAMILY SSF53697 17 190 1.3E-34 T 12-10-2018 YpsIP31758_0369 871305680bd53303a84fb68e338c73fb 201 Gene3D G3DSA:3.40.50.10490 9 199 3.8E-48 T 12-10-2018 YpsIP31758_0369 871305680bd53303a84fb68e338c73fb 201 Pfam PF01380 SIS domain 40 169 7.3E-19 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_2240 ba754ee818faf1b7fd1e4ff3fef53014 197 Pfam PF07105 Protein of unknown function (DUF1367) 1 195 2.1E-76 T 12-10-2018 IPR009797 Protein of unknown function DUF1367 YpsIP31758_1905 b9a827379177741c89e65449687118e8 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.6E-32 T 12-10-2018 IPR025299 CstA, C-terminal domain YpsIP31758_1905 b9a827379177741c89e65449687118e8 688 Pfam PF02554 Carbon starvation protein CstA 32 407 7.3E-170 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YpsIP31758_3479 66844b7c179158fcbce27dfc838788dd 155 PIRSF PIRSF003174 1 155 2.6E-66 T 12-10-2018 IPR010292 Uncharacterised protein family CreA YpsIP31758_3479 66844b7c179158fcbce27dfc838788dd 155 Pfam PF05981 CreA protein 24 155 1.8E-57 T 12-10-2018 IPR010292 Uncharacterised protein family CreA YpsIP31758_0403 c0b143dc3b56e2a781ce37425bb6bf57 1305 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1302 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 YpsIP31758_0403 c0b143dc3b56e2a781ce37425bb6bf57 1305 Pfam PF13502 AsmA-like C-terminal region 1049 1291 1.2E-59 T 12-10-2018 IPR032712 AsmA-like, C-terminal YpsIP31758_0403 c0b143dc3b56e2a781ce37425bb6bf57 1305 Pfam PF13116 Protein of unknown function 511 795 3.4E-98 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 YpsIP31758_1378 fa4cdcfdc6103e9725aef29d85f256b0 159 Pfam PF04965 Gene 25-like lysozyme 36 136 1.3E-16 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_1378 fa4cdcfdc6103e9725aef29d85f256b0 159 SUPERFAMILY SSF160719 72 144 1.18E-10 T 12-10-2018 YpsIP31758_2941 fca0fdf8aa17f051549f78e1dd20c098 264 Pfam PF04233 Phage Mu protein F like protein 136 252 2.7E-7 T 12-10-2018 IPR006528 Phage head morphogenesis domain YpsIP31758_2288 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.1670.40 7 195 1.9E-65 T 12-10-2018 YpsIP31758_2288 52695dc325caef3fc0145fcc007a8168 203 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 1.0E-12 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_2288 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.340.30 35 146 1.9E-65 T 12-10-2018 YpsIP31758_2288 52695dc325caef3fc0145fcc007a8168 203 SUPERFAMILY SSF48150 35 198 1.64E-35 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YpsIP31758_2288 52695dc325caef3fc0145fcc007a8168 203 SMART SM00478 49 201 5.5E-4 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YpsIP31758_1507 4bc1aeb6043c1e9602449d88abcbaabd 305 Gene3D G3DSA:3.40.50.2300 128 299 6.2E-75 T 12-10-2018 YpsIP31758_1507 4bc1aeb6043c1e9602449d88abcbaabd 305 Gene3D G3DSA:3.40.50.2300 36 288 6.2E-75 T 12-10-2018 YpsIP31758_1507 4bc1aeb6043c1e9602449d88abcbaabd 305 Pfam PF13407 Periplasmic binding protein domain 31 276 2.2E-54 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_1507 4bc1aeb6043c1e9602449d88abcbaabd 305 SUPERFAMILY SSF53822 16 300 7.74E-72 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 243 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 246 271 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 93 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 113 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 113 132 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 221 4.6E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 249 261 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 201 216 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 Pfam PF00813 FliP family 77 268 4.9E-77 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 76 272 1.4E-92 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 158 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 262 272 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 132 144 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 194 206 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_2302 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 72 81 2.1E-31 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 Gene3D G3DSA:1.10.260.40 1 44 1.4E-14 T 12-10-2018 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 SUPERFAMILY SSF53822 58 327 8.17E-63 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 Gene3D G3DSA:3.40.50.2300 157 286 2.0E-56 T 12-10-2018 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 45 2.1E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 SMART SM00354 1 67 4.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 Pfam PF13377 Periplasmic binding protein-like domain 166 326 1.3E-32 T 12-10-2018 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 Gene3D G3DSA:3.40.50.2300 58 302 2.0E-56 T 12-10-2018 YpsIP31758_0707 68cd9f9b207fdd3aeb8cb0346607a32e 331 SUPERFAMILY SSF47413 2 54 4.69E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 SUPERFAMILY SSF46689 12 87 1.25E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 SUPERFAMILY SSF53697 105 289 1.26E-43 T 12-10-2018 YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 Gene3D G3DSA:3.40.50.10490 108 290 2.1E-47 T 12-10-2018 YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 Pfam PF01380 SIS domain 138 265 2.0E-19 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 Gene3D G3DSA:1.10.10.10 9 89 1.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_1297 51f0682612b8b54ab4b570a4c8d269d6 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 9.4E-23 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YpsIP31758_4087 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Gene3D G3DSA:3.40.50.1100 6 299 6.1E-73 T 12-10-2018 YpsIP31758_4087 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 291 9.0E-59 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YpsIP31758_4087 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 SUPERFAMILY SSF53686 5 302 4.85E-66 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YpsIP31758_4087 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Gene3D G3DSA:3.40.50.1100 39 140 6.1E-73 T 12-10-2018 YpsIP31758_3184 3ca9769fbe6002dc43d94c830fc9a501 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 2.6E-28 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YpsIP31758_3184 3ca9769fbe6002dc43d94c830fc9a501 256 SUPERFAMILY SSF56317 1 249 1.14E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_3184 3ca9769fbe6002dc43d94c830fc9a501 256 Gene3D G3DSA:3.60.110.10 1 256 1.5E-79 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_3649 0d53074181791645b278512a944f0d33 102 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 41 96 1.1E-21 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 YpsIP31758_0483 6615b680e0a1bfd4a8d08bebaa96faec 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.0E-32 T 12-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 YpsIP31758_0211 39912f724676bb8d5a776ee0a7000b96 410 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 399 2.1E-158 T 12-10-2018 IPR008322 Uncharacterised protein family UPF0261 YpsIP31758_0211 39912f724676bb8d5a776ee0a7000b96 410 PIRSF PIRSF033271 1 403 1.6E-203 T 12-10-2018 IPR008322 Uncharacterised protein family UPF0261 YpsIP31758_0211 39912f724676bb8d5a776ee0a7000b96 410 Hamap MF_00677 UPF0261 protein . 2 402 53.54 T 12-10-2018 IPR008322 Uncharacterised protein family UPF0261 YpsIP31758_0211 39912f724676bb8d5a776ee0a7000b96 410 Gene3D G3DSA:3.40.50.12020 2 175 7.2E-56 T 12-10-2018 YpsIP31758_0211 39912f724676bb8d5a776ee0a7000b96 410 Gene3D G3DSA:3.40.50.12030 183 402 2.9E-85 T 12-10-2018 YpsIP31758_0267 89858700d6efe2739b7d5f2f6ffc354e 289 Pfam PF13350 Tyrosine phosphatase family 10 289 2.9E-55 T 12-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YpsIP31758_0267 89858700d6efe2739b7d5f2f6ffc354e 289 SUPERFAMILY SSF52799 10 288 3.28E-49 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like YpsIP31758_1093 9a2a7f663ce4bbea882fd7c2fc008c27 115 Gene3D G3DSA:1.20.58.280 14 115 2.8E-36 T 12-10-2018 YpsIP31758_1093 9a2a7f663ce4bbea882fd7c2fc008c27 115 PIRSF PIRSF000699 10 115 5.1E-38 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 YpsIP31758_1093 9a2a7f663ce4bbea882fd7c2fc008c27 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 3.9E-33 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 YpsIP31758_1093 9a2a7f663ce4bbea882fd7c2fc008c27 115 SUPERFAMILY SSF46973 16 113 1.24E-33 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 YpsIP31758_2646 75c82b9022afd1236d35c1e9dbb02cb8 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 132 1.4E-14 T 12-10-2018 IPR019660 Putative sensory transduction regulator YbjN YpsIP31758_1561 1bdcb837152ffa6dda53e60c21580649 352 Pfam PF01594 AI-2E family transporter 14 327 4.7E-71 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like YpsIP31758_3771 58cbea32495370e49791f95ad08149a3 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 YpsIP31758_3771 58cbea32495370e49791f95ad08149a3 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 1.0E-33 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 YpsIP31758_3771 58cbea32495370e49791f95ad08149a3 123 Gene3D G3DSA:1.10.3830.10 2 122 2.3E-40 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 YpsIP31758_0246 7b4fa8332450593caf6894ab38877c5d 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 4.6E-56 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0246 7b4fa8332450593caf6894ab38877c5d 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 1.2E-25 T 12-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YpsIP31758_B0097 d84f767aad84a04a24dde91b4ee2ceaf 840 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 21 699 1.4E-112 T 12-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY YpsIP31758_0086 daa2a046b81ff4fa049b4f90e8d74b16 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 20 317 9.9E-68 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA YpsIP31758_0086 daa2a046b81ff4fa049b4f90e8d74b16 319 Pfam PF04754 Putative transposase, YhgA-like 19 220 1.2E-87 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3237 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 YpsIP31758_3745 95c34dcb631f4970298c9e34eec8b3de 193 Pfam PF11198 Protein of unknown function (DUF2857) 9 181 3.8E-61 T 12-10-2018 IPR021364 Protein of unknown function DUF2857 YpsIP31758_1590 8e345356000c2dcec065be27b5371e0d 191 Pfam PF13036 Peptidoglycan-synthase activator LpoB 51 188 1.7E-34 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB YpsIP31758_1590 8e345356000c2dcec065be27b5371e0d 191 Gene3D G3DSA:3.40.50.10610 55 191 2.1E-53 T 12-10-2018 YpsIP31758_1590 8e345356000c2dcec065be27b5371e0d 191 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 190 35.658 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB YpsIP31758_1590 8e345356000c2dcec065be27b5371e0d 191 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 190 5.4E-59 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB YpsIP31758_0206 c4e330644aeedcabc03a027930ffe023 234 Gene3D G3DSA:3.30.450.40 49 232 2.8E-34 T 12-10-2018 IPR029016 GAF-like domain superfamily YpsIP31758_0206 c4e330644aeedcabc03a027930ffe023 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.9E-72 T 12-10-2018 IPR007435 Protein of unknown function DUF484 YpsIP31758_3367 51fc6a74d368285da16d71e6aca2e804 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 2.7E-163 T 12-10-2018 IPR031347 Protein AmpE YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 SUPERFAMILY SSF53822 62 324 2.17E-51 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.2E-22 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 12-10-2018 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 3.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 Gene3D G3DSA:3.40.50.2300 161 292 1.7E-57 T 12-10-2018 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 SMART SM00354 5 75 6.0E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 SUPERFAMILY SSF47413 4 53 7.31E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 Gene3D G3DSA:3.40.50.2300 67 309 1.7E-57 T 12-10-2018 YpsIP31758_1473 decfea150486c8bd14d8231170799bd0 330 Gene3D G3DSA:1.10.260.40 1 61 4.5E-15 T 12-10-2018 YpsIP31758_2854 79e6fc2569b65c3f3fdf817041b3441b 272 Pfam PF02517 CAAX protease self-immunity 172 259 1.2E-19 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 YpsIP31758_3970 13560cfdbd59726cd81b204a35466294 201 Pfam PF05137 Fimbrial assembly protein (PilN) 101 171 6.7E-13 T 12-10-2018 IPR007813 Fimbrial assembly PilN YpsIP31758_0777 4d510bf0047ef416043eba1d72da7f25 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 7.6E-53 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0777 4d510bf0047ef416043eba1d72da7f25 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 6.3E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_0777 4d510bf0047ef416043eba1d72da7f25 166 PIRSF PIRSF028301 1 165 3.4E-55 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YpsIP31758_3663 7eff6aec5550c84374a5e47480725be8 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 8.9E-60 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 YpsIP31758_3663 7eff6aec5550c84374a5e47480725be8 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 1.7E-93 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 YpsIP31758_3663 7eff6aec5550c84374a5e47480725be8 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.699 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 YpsIP31758_2540 6332d2a6d770b92ffdc6836bca6af249 168 Pfam PF03846 Cell division inhibitor SulA 9 120 6.7E-55 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 YpsIP31758_2540 6332d2a6d770b92ffdc6836bca6af249 168 Gene3D G3DSA:3.40.50.300 33 145 2.8E-26 T 12-10-2018 YpsIP31758_2540 6332d2a6d770b92ffdc6836bca6af249 168 SUPERFAMILY SSF52540 32 146 9.96E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_2540 6332d2a6d770b92ffdc6836bca6af249 168 PIRSF PIRSF003093 1 168 2.5E-87 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 YpsIP31758_2540 6332d2a6d770b92ffdc6836bca6af249 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.222 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 YpsIP31758_2323 a8ef7b2bfefe031ddf92f41c4d040948 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site YpsIP31758_2323 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.9E-11 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YpsIP31758_2323 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF00460 Flagella basal body rod protein 7 37 2.3E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YpsIP31758_2323 a8ef7b2bfefe031ddf92f41c4d040948 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 4.6E-52 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YpsIP31758_2278 8cb6b696444ffe532ff471843371f91a 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 1.6E-92 T 12-10-2018 IPR022523 Flagellar regulator, FliZ YpsIP31758_2278 8cb6b696444ffe532ff471843371f91a 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 92 167 4.9E-7 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 SUPERFAMILY SSF52540 5 248 6.6E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 Pfam PF00005 ABC transporter 20 162 4.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 Gene3D G3DSA:3.40.50.300 4 227 1.9E-59 T 12-10-2018 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 Gene3D G3DSA:2.40.50.940 228 361 8.0E-31 T 12-10-2018 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 Gene3D G3DSA:2.40.50.140 295 352 8.0E-31 T 12-10-2018 YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 SUPERFAMILY SSF50331 242 368 1.65E-26 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 SMART SM00382 29 217 8.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain YpsIP31758_0525 3f5f6f09943c18682ad99067b81663dd 371 Pfam PF08402 TOBE domain 289 360 9.1E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 YpsIP31758_1192 200b2ed97dce5211bf9406e5ed1d474d 74 Pfam PF07191 zinc-ribbons 4 68 1.1E-28 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 YpsIP31758_1192 200b2ed97dce5211bf9406e5ed1d474d 74 SUPERFAMILY SSF161187 2 70 2.88E-27 T 12-10-2018 YpsIP31758_1192 200b2ed97dce5211bf9406e5ed1d474d 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 4.0E-32 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 YpsIP31758_1192 200b2ed97dce5211bf9406e5ed1d474d 74 Gene3D G3DSA:2.10.290.10 1 71 2.2E-27 T 12-10-2018 IPR029037 YfgJ-like YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 Gene3D G3DSA:3.40.50.720 2 243 3.4E-66 T 12-10-2018 YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 241 2.9E-54 T 12-10-2018 YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.8E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YpsIP31758_2519 57b47e2f7aaf04986cab7cc28d2ff21c 245 SUPERFAMILY SSF51735 3 243 1.34E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0319 bab78aad26833ffda2a9216f438d3e42 181 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 171 4.5E-36 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_0319 bab78aad26833ffda2a9216f438d3e42 181 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 174 6.3E-38 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_0319 bab78aad26833ffda2a9216f438d3e42 181 Gene3D G3DSA:2.60.40.4150 44 179 7.2E-30 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_4023 c8ed296debedd4ec0848a0b133f0b975 231 Gene3D G3DSA:2.60.120.10 11 135 1.1E-98 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_4023 c8ed296debedd4ec0848a0b133f0b975 231 Pfam PF02678 Pirin 11 119 2.0E-37 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 YpsIP31758_4023 c8ed296debedd4ec0848a0b133f0b975 231 SUPERFAMILY SSF51182 1 231 1.4E-79 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_4023 c8ed296debedd4ec0848a0b133f0b975 231 Gene3D G3DSA:2.60.120.10 7 229 1.1E-98 T 12-10-2018 IPR014710 RmlC-like jelly roll fold YpsIP31758_4023 c8ed296debedd4ec0848a0b133f0b975 231 PIRSF PIRSF006232 1 231 3.9E-55 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 YpsIP31758_1962 e4b8c190c89f068c0873b26d8c06ad20 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.2E-78 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_1962 e4b8c190c89f068c0873b26d8c06ad20 214 Pfam PF01914 MarC family integral membrane protein 10 210 7.7E-73 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 SUPERFAMILY SSF141729 4 129 7.19E-28 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 Gene3D G3DSA:3.10.20.410 4 129 1.9E-27 T 12-10-2018 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 Pfam PF00577 Outer membrane usher protein 177 738 1.4E-147 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 Gene3D G3DSA:2.60.40.2610 654 745 4.0E-26 T 12-10-2018 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 Gene3D G3DSA:2.60.40.3110 245 334 5.9E-31 T 12-10-2018 YpsIP31758_1365 a1d2e075ba8d305a8586f6cd20b34393 833 Pfam PF13954 PapC N-terminal domain 5 151 3.3E-37 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 Gene3D G3DSA:2.40.37.10 8 352 4.2E-132 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 SMART SM01005 233 357 2.8E-59 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 7.6E-72 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 SUPERFAMILY SSF51419 8 234 3.49E-71 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 5.7E-132 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 26 42 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 60 78 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 192 219 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 155 166 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 249 264 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 266 281 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 339 352 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 120 132 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 PRINTS PR00992 Alanine racemase signature 287 304 1.2E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 Hamap MF_01201 Alanine racemase. 1 357 34.065 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 SUPERFAMILY SSF50621 225 358 1.15E-42 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.9E-38 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YpsIP31758_3764 88aab04f03d0c265be4eb73ecbbafc48 359 Gene3D G3DSA:3.20.20.10 10 217 4.2E-132 T 12-10-2018 IPR029066 PLP-binding barrel YpsIP31758_0559 3a9c20c2037a024d43491e91375dc7a9 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.356 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YpsIP31758_0559 3a9c20c2037a024d43491e91375dc7a9 272 Pfam PF02673 Bacitracin resistance protein BacA 10 266 9.2E-86 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YpsIP31758_0559 3a9c20c2037a024d43491e91375dc7a9 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 6.6E-99 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 SMART SM01004 9 333 1.2E-239 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 SUPERFAMILY SSF51569 7 335 1.42E-143 T 12-10-2018 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.0E-139 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 Gene3D G3DSA:3.20.20.70 3 337 2.3E-146 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PIRSF PIRSF001415 2 336 5.4E-154 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.4E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_0278 1f36be251c3ea54df3195f90e5550a5b 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YpsIP31758_2616 f7ce7ff0a084511abc7051a4400a7ad2 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 8.0E-68 T 12-10-2018 IPR005642 Lysine exporter LysO YpsIP31758_2616 f7ce7ff0a084511abc7051a4400a7ad2 298 Pfam PF03956 Lysine exporter LysO 113 297 4.1E-56 T 12-10-2018 IPR005642 Lysine exporter LysO YpsIP31758_1742 64f5c311716fd6f0f2936e1351e85529 503 SUPERFAMILY SSF101960 41 500 1.31E-134 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YpsIP31758_1742 64f5c311716fd6f0f2936e1351e85529 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 7.1E-68 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YpsIP31758_1742 64f5c311716fd6f0f2936e1351e85529 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 5.5E-194 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 YpsIP31758_4094 9246302fa3233ec0281bf4e277bd2e72 256 Pfam PF13310 Virulence protein RhuM family 70 252 5.9E-82 T 12-10-2018 IPR011204 Virulence protein RhuM-like YpsIP31758_1866 3bf5c832a71c6623393128a38a49bb2b 81 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 3.5E-27 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 YpsIP31758_1866 3bf5c832a71c6623393128a38a49bb2b 81 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 76 4.0E-17 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 YpsIP31758_1030 1d66b92fb90f5ffd35c987a7998a6f8c 132 Gene3D G3DSA:3.10.180.10 9 128 1.5E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_1030 1d66b92fb90f5ffd35c987a7998a6f8c 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 5.1E-21 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YpsIP31758_1030 1d66b92fb90f5ffd35c987a7998a6f8c 132 SUPERFAMILY SSF54593 4 129 1.17E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YpsIP31758_0887 06966a7538f2e8d090c0315e9836961a 120 Gene3D G3DSA:1.10.260.40 64 119 1.6E-10 T 12-10-2018 YpsIP31758_0887 06966a7538f2e8d090c0315e9836961a 120 Pfam PF01381 Helix-turn-helix 65 114 1.2E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0887 06966a7538f2e8d090c0315e9836961a 120 SUPERFAMILY SSF47413 63 115 1.8E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YpsIP31758_0887 06966a7538f2e8d090c0315e9836961a 120 SMART SM00530 63 118 6.6E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 Gene3D G3DSA:1.10.10.2600 209 316 3.9E-11 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 SUPERFAMILY SSF53041 15 166 1.7E-22 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 Pfam PF07508 Recombinase 211 315 4.3E-21 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 SMART SM00857 15 166 2.0E-32 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 Pfam PF00239 Resolvase, N terminal domain 16 158 4.8E-22 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 YpsIP31758_0770 d4193cc5c27b85d50455bc9658ef1934 519 Gene3D G3DSA:3.40.50.1390 11 171 3.4E-32 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 Gene3D G3DSA:1.10.3860.10 8 406 2.5E-71 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 Pfam PF00375 Sodium:dicarboxylate symporter family 17 399 1.0E-63 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 7.4E-14 T 12-10-2018 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 SUPERFAMILY SSF118215 17 400 2.09E-94 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 YpsIP31758_0495 158053e0d4bf7929341a2b97d9ce4361 418 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.17 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 YpsIP31758_B0016 ef3d363aea88ca663b8b95c58ebc7b27 178 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 32 158 9.0E-34 T 12-10-2018 IPR022753 Type IV pilus biogenesis PilP YpsIP31758_3255 a83369c2e503f24b5fa07b115df996a1 127 PIRSF PIRSF000029 1 127 4.3E-61 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YpsIP31758_3255 a83369c2e503f24b5fa07b115df996a1 127 SUPERFAMILY SSF47175 22 127 1.44E-35 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YpsIP31758_3255 a83369c2e503f24b5fa07b115df996a1 127 Gene3D G3DSA:1.20.120.10 17 127 1.3E-42 T 12-10-2018 YpsIP31758_3255 a83369c2e503f24b5fa07b115df996a1 127 Pfam PF07361 Cytochrome b562 23 127 1.4E-27 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YpsIP31758_3933 cfdc1cde0e863b8b5733838febc2e172 329 SUPERFAMILY SSF53448 6 232 3.31E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3933 cfdc1cde0e863b8b5733838febc2e172 329 Gene3D G3DSA:3.90.550.10 5 205 1.5E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_3933 cfdc1cde0e863b8b5733838febc2e172 329 Pfam PF00535 Glycosyl transferase family 2 7 134 9.4E-30 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YpsIP31758_0485 fc9b2680001628c9c3ad61856e0d4b52 126 Pfam PF06476 Protein of unknown function (DUF1090) 13 120 3.4E-38 T 12-10-2018 IPR009468 Protein of unknown function DUF1090 YpsIP31758_2426 9d0483260b9d4aa2d301f4b125d34352 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 4.1E-6 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YpsIP31758_2426 9d0483260b9d4aa2d301f4b125d34352 275 SUPERFAMILY SSF51735 2 267 1.94E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_2426 9d0483260b9d4aa2d301f4b125d34352 275 Gene3D G3DSA:3.40.50.720 1 271 4.4E-60 T 12-10-2018 YpsIP31758_0404 1f251f0b0a4f8a9a9c5b1d8ec35e87cb 289 Gene3D G3DSA:3.60.110.10 1 273 1.0E-85 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_0404 1f251f0b0a4f8a9a9c5b1d8ec35e87cb 289 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 7.0E-48 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YpsIP31758_0404 1f251f0b0a4f8a9a9c5b1d8ec35e87cb 289 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site YpsIP31758_0404 1f251f0b0a4f8a9a9c5b1d8ec35e87cb 289 SUPERFAMILY SSF56317 2 267 2.75E-72 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_1832 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 4 146 6.5E-19 T 12-10-2018 IPR006016 UspA YpsIP31758_1832 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 174 300 1.1E-12 T 12-10-2018 IPR006016 UspA YpsIP31758_1832 c0da8f83ed281e78bca5f5383e257fb3 318 Gene3D G3DSA:3.40.50.12370 1 315 6.5E-131 T 12-10-2018 YpsIP31758_1832 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 4 152 7.87E-28 T 12-10-2018 YpsIP31758_1832 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 156 305 5.11E-24 T 12-10-2018 YpsIP31758_2134 966844e2ca973b9c3ce0d1a5e9d5dd07 103 SUPERFAMILY SSF46626 7 98 6.49E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_2134 966844e2ca973b9c3ce0d1a5e9d5dd07 103 Gene3D G3DSA:1.10.760.10 11 102 1.1E-12 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YpsIP31758_2134 966844e2ca973b9c3ce0d1a5e9d5dd07 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 92 2.3E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YpsIP31758_B0082 be198c99d58215a0fa997ecfda0daf2f 227 PIRSF PIRSF028111 1 227 3.4E-50 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 YpsIP31758_2474 4a04228693286274798ead8d24906221 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 2.1E-120 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 YpsIP31758_2474 4a04228693286274798ead8d24906221 280 Gene3D G3DSA:3.40.50.1820 5 279 3.6E-93 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2474 4a04228693286274798ead8d24906221 280 SUPERFAMILY SSF53474 5 278 1.01E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2474 4a04228693286274798ead8d24906221 280 Pfam PF00756 Putative esterase 26 261 3.0E-69 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.8E-139 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF04055 Radical SAM superfamily 11 179 1.5E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF06969 HemN C-terminal domain 306 364 4.8E-8 T 12-10-2018 IPR010723 HemN, C-terminal YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 Gene3D G3DSA:3.80.30.20 2 291 1.7E-98 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 SUPERFAMILY SSF102114 5 376 1.96E-107 T 12-10-2018 YpsIP31758_0825 a6d3ae5121b2c3cb2bb2be501962fbae 376 SMART SM00729 6 223 3.6E-49 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YpsIP31758_0743 22a8676657863ada1c22c1f5f945da3e 102 Gene3D G3DSA:1.10.443.10 3 101 1.1E-14 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0743 22a8676657863ada1c22c1f5f945da3e 102 Pfam PF00589 Phage integrase family 22 81 3.7E-10 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YpsIP31758_0743 22a8676657863ada1c22c1f5f945da3e 102 SUPERFAMILY SSF56349 26 91 1.03E-13 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_0517 c864645a8f17b48ad4cbe4e0af632a87 203 Gene3D G3DSA:3.40.1350.120 73 203 4.2E-51 T 12-10-2018 YpsIP31758_3239 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 2 85 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3239 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 86 130 2.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3239 f191954e0649c174e6ca97ab4c69e169 182 Hamap MF_01114 Regulatory protein RecX [recX]. 2 182 15.088 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 YpsIP31758_3239 f191954e0649c174e6ca97ab4c69e169 182 Gene3D G3DSA:1.10.10.10 132 181 9.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_3239 f191954e0649c174e6ca97ab4c69e169 182 Pfam PF02631 RecX family 67 178 1.0E-31 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 4.0E-6 T 12-10-2018 IPR019533 Peptidase S26 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 166 2.1E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 268 312 3.9E-17 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 Gene3D G3DSA:2.170.230.10 162 271 4.4E-72 T 12-10-2018 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 3.0E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 3.0E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 3.0E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 SUPERFAMILY SSF51306 85 331 3.82E-77 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 Gene3D G3DSA:2.10.109.10 87 312 4.4E-72 T 12-10-2018 YpsIP31758_1135 b0170ac3f0fc8344c65e0d102d236eab 332 Pfam PF00717 Peptidase S24-like 93 166 3.3E-20 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YpsIP31758_0528 f1ae9e0a782554b887c0b0b3288bf273 414 Pfam PF01547 Bacterial extracellular solute-binding protein 34 324 1.2E-25 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_0528 f1ae9e0a782554b887c0b0b3288bf273 414 SUPERFAMILY SSF53850 22 411 2.72E-46 T 12-10-2018 YpsIP31758_0528 f1ae9e0a782554b887c0b0b3288bf273 414 Gene3D G3DSA:3.40.190.10 22 414 1.2E-49 T 12-10-2018 YpsIP31758_3394 ae08b8903dfa75169799b847bc7ab2df 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 17.014 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 YpsIP31758_3394 ae08b8903dfa75169799b847bc7ab2df 105 Pfam PF04999 Cell division protein FtsL 11 104 3.5E-34 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 YpsIP31758_3394 ae08b8903dfa75169799b847bc7ab2df 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 7.2E-28 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 YpsIP31758_1301 434b7f2b577874e36cc9be67b7fb69fe 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 2.0E-106 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YpsIP31758_1301 434b7f2b577874e36cc9be67b7fb69fe 291 Gene3D G3DSA:1.10.3720.10 20 276 3.9E-59 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1301 434b7f2b577874e36cc9be67b7fb69fe 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 5.7E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1301 434b7f2b577874e36cc9be67b7fb69fe 291 SUPERFAMILY SSF161098 16 268 2.09E-52 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1301 434b7f2b577874e36cc9be67b7fb69fe 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 1.2E-113 T 12-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 YpsIP31758_0161 63f2381bf4b08f12c970cd7234768be0 292 Pfam PF11692 Protein of unknown function (DUF3289) 13 285 5.5E-115 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_0161 63f2381bf4b08f12c970cd7234768be0 292 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 11 285 2.5E-140 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_3913 ca36d1e45dec6dd380e0b0a233ad91d0 100 Pfam PF00276 Ribosomal protein L23 9 95 2.3E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3913 ca36d1e45dec6dd380e0b0a233ad91d0 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YpsIP31758_3913 ca36d1e45dec6dd380e0b0a233ad91d0 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YpsIP31758_3913 ca36d1e45dec6dd380e0b0a233ad91d0 100 Gene3D G3DSA:3.30.70.330 1 100 1.7E-39 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YpsIP31758_3913 ca36d1e45dec6dd380e0b0a233ad91d0 100 SUPERFAMILY SSF54189 3 92 5.76E-31 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 YpsIP31758_0457 8f9f43d89fac8ee1f99084e7f9ea47f5 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 7.5E-50 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 YpsIP31758_0457 8f9f43d89fac8ee1f99084e7f9ea47f5 134 PIRSF PIRSF006318 1 134 1.0E-51 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 145 395 4.3E-146 T 12-10-2018 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 43 61 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 158 177 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 240 259 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 77 95 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 178 197 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 306 327 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 364 383 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 137 156 2.9E-90 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 SUPERFAMILY SSF53850 36 402 5.02E-93 T 12-10-2018 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 55 364 4.3E-146 T 12-10-2018 YpsIP31758_0306 47f5265ac074807bb1422c1a1af57ff4 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 3.1E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_0616 839f66d0c1ea83d39e59d70d3f36a5fb 367 Pfam PF00419 Fimbrial protein 219 366 4.2E-11 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_0616 839f66d0c1ea83d39e59d70d3f36a5fb 367 Gene3D G3DSA:2.60.40.1090 219 366 2.7E-24 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_0616 839f66d0c1ea83d39e59d70d3f36a5fb 367 SUPERFAMILY SSF49401 222 366 2.39E-19 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_B0088 83c7b9a3dd900ae36489dbb5ad973a68 151 Gene3D G3DSA:3.30.40.60 2 121 6.0E-7 T 12-10-2018 YpsIP31758_0802 ba01bb39d1a0a583b43d18c3ab5811df 193 Gene3D G3DSA:2.60.40.4150 58 193 8.2E-46 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily YpsIP31758_0802 ba01bb39d1a0a583b43d18c3ab5811df 193 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 29 174 5.1E-23 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_0802 ba01bb39d1a0a583b43d18c3ab5811df 193 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 32 184 2.5E-38 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN YpsIP31758_3205 eaf81148b2df703348954b4c45febe06 249 SMART SM01144 42 234 2.0E-74 T 12-10-2018 IPR005636 DTW YpsIP31758_3205 eaf81148b2df703348954b4c45febe06 249 Pfam PF03942 DTW domain 45 229 4.4E-44 T 12-10-2018 IPR005636 DTW YpsIP31758_1360 679ea69dfd08ff45f828174809dba2d9 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 3.4E-96 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_1360 679ea69dfd08ff45f828174809dba2d9 341 Pfam PF06996 Type VI secretion, TssG 23 320 1.0E-82 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_0780 f9160d0904a8a511663dbbfbef17b95b 228 Pfam PF09850 Type VI secretion system protein DotU 14 215 1.4E-44 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0780 f9160d0904a8a511663dbbfbef17b95b 228 Gene3D G3DSA:1.25.40.590 8 187 1.4E-47 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_0780 f9160d0904a8a511663dbbfbef17b95b 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 5.7E-46 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_1986 26f5f9ffbe4b1469d9bd60c83f07df27 137 SUPERFAMILY SSF51316 6 133 8.89E-58 T 12-10-2018 IPR011057 Mss4-like superfamily YpsIP31758_1986 26f5f9ffbe4b1469d9bd60c83f07df27 137 Gene3D G3DSA:2.170.150.20 4 136 1.1E-59 T 12-10-2018 YpsIP31758_1986 26f5f9ffbe4b1469d9bd60c83f07df27 137 Pfam PF01641 SelR domain 12 127 3.0E-52 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_1986 26f5f9ffbe4b1469d9bd60c83f07df27 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 37.073 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_1986 26f5f9ffbe4b1469d9bd60c83f07df27 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 5.5E-60 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YpsIP31758_2733 b60b5cadc21f07235611b6920651eccf 378 Pfam PF04865 Baseplate J-like protein 66 340 1.3E-84 T 12-10-2018 IPR006949 Baseplate protein J-like YpsIP31758_3169 ccaa803e6c34c33892785cffb34455b7 246 SUPERFAMILY SSF141523 40 158 9.68E-10 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YpsIP31758_3169 ccaa803e6c34c33892785cffb34455b7 246 Pfam PF03734 L,D-transpeptidase catalytic domain 43 158 2.9E-8 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YpsIP31758_0394 dea783ea829a36099f1a0a6e676bd1c1 203 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 201 21.62 T 12-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 YpsIP31758_0394 dea783ea829a36099f1a0a6e676bd1c1 203 Pfam PF01794 Ferric reductase like transmembrane component 48 161 1.5E-16 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain YpsIP31758_2465 5fc8588eddcfe547dde6fd80005ee599 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 2.5E-49 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3527 3c5c37fde0e5e5aeeece468d94594923 163 Pfam PF10696 Protein of unknown function (DUF2501) 82 160 2.8E-29 T 12-10-2018 IPR019637 Protein of unknown function DUF2501 YpsIP31758_1479 19bf57210be563d9495782c578aca76c 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 1.6E-30 T 12-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 YpsIP31758_1503 c502a03f72c9860be237bf7ce87c95fc 190 Gene3D G3DSA:1.20.1260.90 34 190 3.3E-20 T 12-10-2018 IPR038334 NleF superfamily YpsIP31758_1503 c502a03f72c9860be237bf7ce87c95fc 190 Pfam PF16809 NleF caspase inhibitor 37 179 2.4E-37 T 12-10-2018 IPR031829 Effector protein NleF YpsIP31758_0688 bd15b19f331fd5cd17dc6764da0d5a15 434 Pfam PF07690 Major Facilitator Superfamily 23 342 4.3E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YpsIP31758_0688 bd15b19f331fd5cd17dc6764da0d5a15 434 Gene3D G3DSA:1.20.1250.20 21 409 3.5E-15 T 12-10-2018 YpsIP31758_0688 bd15b19f331fd5cd17dc6764da0d5a15 434 SUPERFAMILY SSF103473 15 418 5.75E-26 T 12-10-2018 IPR036259 MFS transporter superfamily YpsIP31758_2919 7afa322bf220e9636b96e933b36cf5d0 515 Gene3D G3DSA:3.60.110.10 217 479 1.4E-10 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_2919 7afa322bf220e9636b96e933b36cf5d0 515 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 4.2E-38 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YpsIP31758_2919 7afa322bf220e9636b96e933b36cf5d0 515 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.545 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 YpsIP31758_2919 7afa322bf220e9636b96e933b36cf5d0 515 SUPERFAMILY SSF56317 216 491 5.49E-40 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YpsIP31758_2919 7afa322bf220e9636b96e933b36cf5d0 515 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 459 1.6E-108 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 YpsIP31758_2993 580a194b4f34d41491efdfa024a3f24d 176 Pfam PF14345 GDYXXLXY protein 16 165 2.7E-35 T 12-10-2018 IPR025833 GDYXXLXY protein YpsIP31758_2739 8371ff55731a8e64ab40c27dc6ddd688 99 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 1.6E-15 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative YpsIP31758_2233 8921b291273ad711a9a95fb14c642fc9 72 Pfam PF09926 Uncharacterized small protein (DUF2158) 11 65 2.8E-12 T 12-10-2018 IPR019226 Protein of unknown function DUF2158 YpsIP31758_2225 a009c17b66439d46701ffc02884fd332 547 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 367 476 2.3E-13 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit YpsIP31758_1494 418cee8065e67993cb7d276e7762e0d9 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.9E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1494 418cee8065e67993cb7d276e7762e0d9 218 SUPERFAMILY SSF161098 13 201 1.7E-41 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1494 418cee8065e67993cb7d276e7762e0d9 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 6.8E-30 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_1494 418cee8065e67993cb7d276e7762e0d9 218 Gene3D G3DSA:1.10.3720.10 1 216 3.0E-52 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2940 5e89811ffcbca8591ae55839d4d0a611 223 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 4 155 2.8E-33 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 YpsIP31758_3366 5fc2aa570577e19a7dc8bdf8ead13736 465 Pfam PF00324 Amino acid permease 18 449 2.0E-118 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 YpsIP31758_3366 5fc2aa570577e19a7dc8bdf8ead13736 465 Gene3D G3DSA:1.20.1740.10 10 464 3.6E-59 T 12-10-2018 YpsIP31758_3366 5fc2aa570577e19a7dc8bdf8ead13736 465 PIRSF PIRSF006060 1 462 4.8E-75 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_3366 5fc2aa570577e19a7dc8bdf8ead13736 465 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YpsIP31758_1238 20da40b0884dc10af5828f3d0edb8286 118 Gene3D G3DSA:3.40.30.10 1 118 8.0E-52 T 12-10-2018 YpsIP31758_1238 20da40b0884dc10af5828f3d0edb8286 118 Pfam PF03960 ArsC family 7 116 6.8E-23 T 12-10-2018 IPR006660 Arsenate reductase-like YpsIP31758_1238 20da40b0884dc10af5828f3d0edb8286 118 SUPERFAMILY SSF52833 3 117 4.48E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_1238 20da40b0884dc10af5828f3d0edb8286 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 8.7E-48 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YpsIP31758_3928 52de4f6a3c7748282efc51c4af2ef003 199 Gene3D G3DSA:3.10.50.40 3 154 2.1E-60 T 12-10-2018 YpsIP31758_3928 52de4f6a3c7748282efc51c4af2ef003 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.2E-9 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YpsIP31758_3928 52de4f6a3c7748282efc51c4af2ef003 199 Gene3D G3DSA:2.40.10.330 71 121 2.1E-60 T 12-10-2018 YpsIP31758_3928 52de4f6a3c7748282efc51c4af2ef003 199 SUPERFAMILY SSF54534 2 140 2.55E-32 T 12-10-2018 YpsIP31758_0243 e809861bb6124bf7f912b75ca2dd7786 130 SUPERFAMILY SSF55729 16 126 3.43E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_0243 e809861bb6124bf7f912b75ca2dd7786 130 Gene3D G3DSA:3.40.630.30 1 130 7.2E-37 T 12-10-2018 YpsIP31758_0243 e809861bb6124bf7f912b75ca2dd7786 130 Hamap MF_02018 PanD regulatory factor [panZ]. 1 130 33.86 T 12-10-2018 IPR032900 PanD regulatory factor PanZ GO:0015940|GO:0031638 YpsIP31758_0243 e809861bb6124bf7f912b75ca2dd7786 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 1.3E-54 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_4092 43cb7935d2986aeb08063727aa03783a 319 SUPERFAMILY SSF81345 5 313 1.57E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_4092 43cb7935d2986aeb08063727aa03783a 319 Pfam PF01032 FecCD transport family 13 313 4.1E-65 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_4092 43cb7935d2986aeb08063727aa03783a 319 Gene3D G3DSA:1.10.3470.10 1 318 8.9E-65 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_0345 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF51735 17 176 3.94E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily YpsIP31758_0345 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.40.50.720 22 148 7.8E-25 T 12-10-2018 YpsIP31758_0345 fb5ca35d188df8a9d417bf49c4902e14 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 23 145 7.8E-14 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 YpsIP31758_0345 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.30.360.10 149 372 9.1E-32 T 12-10-2018 YpsIP31758_0345 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF55347 152 312 5.01E-16 T 12-10-2018 YpsIP31758_1430 afd5a9953aee8dc9b34ecbb49c298b39 238 SUPERFAMILY SSF161098 17 214 1.96E-37 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1430 afd5a9953aee8dc9b34ecbb49c298b39 238 Gene3D G3DSA:1.10.3720.10 8 229 1.8E-42 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_1430 afd5a9953aee8dc9b34ecbb49c298b39 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 227 7.7E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_1430 afd5a9953aee8dc9b34ecbb49c298b39 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 1.7E-14 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_1527 494a4e9776c0d38ff895e73b2d9dd8b7 428 Gene3D G3DSA:3.40.190.10 154 405 6.0E-107 T 12-10-2018 YpsIP31758_1527 494a4e9776c0d38ff895e73b2d9dd8b7 428 Pfam PF13416 Bacterial extracellular solute-binding protein 56 364 1.5E-34 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_1527 494a4e9776c0d38ff895e73b2d9dd8b7 428 SUPERFAMILY SSF53850 22 427 1.03E-61 T 12-10-2018 YpsIP31758_1527 494a4e9776c0d38ff895e73b2d9dd8b7 428 Gene3D G3DSA:3.40.190.10 38 384 6.0E-107 T 12-10-2018 YpsIP31758_1865 068b36ec95c6a0f825f01bde406c138b 124 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 124 32.539 T 12-10-2018 IPR009700 Protein of unknown function DUF1283 YpsIP31758_1865 068b36ec95c6a0f825f01bde406c138b 124 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 30 124 2.0E-50 T 12-10-2018 IPR009700 Protein of unknown function DUF1283 YpsIP31758_1865 068b36ec95c6a0f825f01bde406c138b 124 Pfam PF06932 Protein of unknown function (DUF1283) 42 124 2.6E-38 T 12-10-2018 IPR009700 Protein of unknown function DUF1283 YpsIP31758_B0113 8ed619dd043922c67edd8a07e52a234c 344 Gene3D G3DSA:1.10.443.10 99 306 4.1E-8 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YpsIP31758_B0113 8ed619dd043922c67edd8a07e52a234c 344 SUPERFAMILY SSF56349 19 295 2.94E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YpsIP31758_3720 cf0c9bf63cedc56ec2764d5befeb9496 212 SUPERFAMILY SSF53955 36 193 3.19E-18 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily YpsIP31758_3720 cf0c9bf63cedc56ec2764d5befeb9496 212 Gene3D G3DSA:1.10.530.10 33 189 1.6E-5 T 12-10-2018 YpsIP31758_3720 cf0c9bf63cedc56ec2764d5befeb9496 212 Pfam PF01464 Transglycosylase SLT domain 44 162 2.1E-5 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 YpsIP31758_2968 f4be85931355e9b67e46187db0af1c3c 306 Pfam PF01261 Xylose isomerase-like TIM barrel 42 238 7.2E-23 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YpsIP31758_2968 f4be85931355e9b67e46187db0af1c3c 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 13 299 5.8E-126 T 12-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YpsIP31758_2968 f4be85931355e9b67e46187db0af1c3c 306 SUPERFAMILY SSF51658 14 299 1.8E-53 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily YpsIP31758_2968 f4be85931355e9b67e46187db0af1c3c 306 Gene3D G3DSA:3.20.20.150 5 299 1.1E-71 T 12-10-2018 YpsIP31758_2484 7bf855a62fbbf2561bd73827769bd8a3 207 Pfam PF16809 NleF caspase inhibitor 35 195 1.0E-54 T 12-10-2018 IPR031829 Effector protein NleF YpsIP31758_2484 7bf855a62fbbf2561bd73827769bd8a3 207 Gene3D G3DSA:1.20.1260.90 34 202 1.2E-6 T 12-10-2018 IPR038334 NleF superfamily YpsIP31758_3878 f151b14fb5936779bf5b47ff4944e129 190 SUPERFAMILY SSF55821 10 186 5.8E-54 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YpsIP31758_3878 f151b14fb5936779bf5b47ff4944e129 190 Pfam PF01300 Telomere recombination 16 182 1.6E-42 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 YpsIP31758_3878 f151b14fb5936779bf5b47ff4944e129 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.278 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 YpsIP31758_3878 f151b14fb5936779bf5b47ff4944e129 190 Gene3D G3DSA:3.90.870.10 1 188 2.8E-61 T 12-10-2018 YpsIP31758_3925 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 26 141 6.0E-63 T 12-10-2018 IPR013559 YheO-like YpsIP31758_3925 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 Pfam PF13309 HTH domain 171 228 3.2E-19 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain YpsIP31758_3925 1ea0a0a6bb91a04b89d2f07908f2d9f1 240 Pfam PF08348 YheO-like PAS domain 29 137 6.2E-36 T 12-10-2018 IPR013559 YheO-like YpsIP31758_3923 699318a71524e7a6b04f82d0da248795 121 SUPERFAMILY SSF75169 4 121 9.94E-38 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_3923 699318a71524e7a6b04f82d0da248795 121 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 121 2.6E-48 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF YpsIP31758_3923 699318a71524e7a6b04f82d0da248795 121 Pfam PF02635 DsrE/DsrF-like family 4 121 1.7E-24 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YpsIP31758_3923 699318a71524e7a6b04f82d0da248795 121 Hamap MF_00389 Protein TusC [tusC]. 3 121 37.128 T 12-10-2018 IPR037450 Sulphur relay, TusC YpsIP31758_3923 699318a71524e7a6b04f82d0da248795 121 Gene3D G3DSA:3.40.1260.10 3 121 3.6E-39 T 12-10-2018 IPR027396 DsrEFH-like YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 SUPERFAMILY SSF51430 7 295 1.7E-72 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 Pfam PF00248 Aldo/keto reductase family 17 291 7.3E-61 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 3.0E-8 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-8 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-8 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YpsIP31758_1766 ea9b44e19383871606bd559a463e300e 298 Gene3D G3DSA:3.20.20.100 2 298 1.1E-106 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 PRINTS PR01007 Flagellar hook-length control protein signature 36 53 1.1E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 PRINTS PR01007 Flagellar hook-length control protein signature 130 153 1.1E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 PRINTS PR01007 Flagellar hook-length control protein signature 262 280 1.1E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 PRINTS PR01007 Flagellar hook-length control protein signature 296 319 1.1E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 Pfam PF02120 Flagellar hook-length control protein FliK 247 330 8.9E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal YpsIP31758_0658 b99290c1fcde0c9646e37faea3841aed 365 Gene3D G3DSA:3.30.750.140 223 339 7.4E-19 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily YpsIP31758_3635 140bbf330a10d17223bd09617c53811c 151 Pfam PF12582 Protein of unknown function (DUF3757) 20 142 1.7E-34 T 12-10-2018 IPR022231 Protein of unknown function DUF3757 YpsIP31758_2421 3f617d81be7dae78f05f0da685bd4579 463 PIRSF PIRSF006060 6 457 3.9E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2421 3f617d81be7dae78f05f0da685bd4579 463 Pfam PF13520 Amino acid permease 53 417 1.0E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2421 3f617d81be7dae78f05f0da685bd4579 463 Gene3D G3DSA:1.20.1740.10 21 456 2.7E-63 T 12-10-2018 YpsIP31758_2851 5e69b7b4777c4a7fe9ce935630257dcb 50 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 46 5.3E-31 T 12-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YpsIP31758_2851 5e69b7b4777c4a7fe9ce935630257dcb 50 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 47 19.556 T 12-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 4.5E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 275 9.4E-149 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 SUPERFAMILY SSF56300 1 259 6.53E-58 T 12-10-2018 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 PIRSF PIRSF000903 1 275 1.2E-121 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.521 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YpsIP31758_3446 a4fd2fd649aa507ce6c68c94c456e2b4 289 Gene3D G3DSA:3.60.21.10 1 279 1.4E-82 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like YpsIP31758_1245 33d80cd79fd5046b374e7a914fda32dd 156 PIRSF PIRSF000239 1 145 2.4E-17 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_1245 33d80cd79fd5046b374e7a914fda32dd 156 Pfam PF00578 AhpC/TSA family 7 134 9.9E-40 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YpsIP31758_1245 33d80cd79fd5046b374e7a914fda32dd 156 Gene3D G3DSA:3.40.30.10 4 155 3.9E-48 T 12-10-2018 YpsIP31758_1245 33d80cd79fd5046b374e7a914fda32dd 156 SUPERFAMILY SSF52833 3 154 4.29E-50 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_2927 150956a1e3a738c7b064580ec4fba705 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.726 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YpsIP31758_2927 150956a1e3a738c7b064580ec4fba705 207 Pfam PF04390 Lipopolysaccharide-assembly 45 159 3.2E-13 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YpsIP31758_2927 150956a1e3a738c7b064580ec4fba705 207 Gene3D G3DSA:3.30.160.150 16 164 6.9E-62 T 12-10-2018 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 PIRSF PIRSF000460 2 801 7.8E-209 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 SUPERFAMILY SSF53756 7 799 1.41E-293 T 12-10-2018 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 Gene3D G3DSA:3.40.50.2000 61 798 0.0 T 12-10-2018 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 798 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 YpsIP31758_3993 505118b3ce580cb9b487982574519c80 801 Gene3D G3DSA:3.40.50.2000 457 784 0.0 T 12-10-2018 YpsIP31758_3735 3ac4d77307b40908dbefce500216df49 145 Pfam PF07419 PilM 12 144 4.5E-25 T 12-10-2018 IPR009987 PilM, inner membrane YpsIP31758_3735 3ac4d77307b40908dbefce500216df49 145 Gene3D G3DSA:3.30.450.360 27 145 1.2E-39 T 12-10-2018 YpsIP31758_1437 b531f12012cd28744158f453e97542d4 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 4.6E-148 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 YpsIP31758_2086 9f6a98977db54dc606548faa5d49e190 140 Gene3D G3DSA:1.20.1290.10 14 140 5.4E-38 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_2086 9f6a98977db54dc606548faa5d49e190 140 SUPERFAMILY SSF69118 38 138 1.44E-30 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_2086 9f6a98977db54dc606548faa5d49e190 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 134 2.6E-22 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YpsIP31758_B0008 64978859fe199b94ca36c004cc95fdbb 351 Gene3D G3DSA:2.70.70.10 1 134 6.5E-20 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_B0008 64978859fe199b94ca36c004cc95fdbb 351 Pfam PF01551 Peptidase family M23 34 121 1.2E-18 T 12-10-2018 IPR016047 Peptidase M23 YpsIP31758_B0008 64978859fe199b94ca36c004cc95fdbb 351 SUPERFAMILY SSF51261 9 118 3.24E-19 T 12-10-2018 IPR011055 Duplicated hybrid motif YpsIP31758_3838 6c00dd6073f73f2028a2cd3e90750284 360 Gene3D G3DSA:3.40.50.1820 3 360 3.0E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3838 6c00dd6073f73f2028a2cd3e90750284 360 SUPERFAMILY SSF53474 35 360 6.87E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_3838 6c00dd6073f73f2028a2cd3e90750284 360 Pfam PF12715 Abhydrolase family 22 316 2.8E-19 T 12-10-2018 IPR025890 Abhydrolase, bacterial YpsIP31758_0828 a154b9e58393e42e7833d1c8b5cf6257 184 Pfam PF02325 YGGT family 10 76 1.3E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 YpsIP31758_0828 a154b9e58393e42e7833d1c8b5cf6257 184 Pfam PF02325 YGGT family 108 172 7.2E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 YpsIP31758_2425 e1d7a3da24dac2925053ba157a96ed51 144 Gene3D G3DSA:1.20.120.1620 44 143 3.1E-32 T 12-10-2018 IPR038314 T6SS superfamily YpsIP31758_2425 e1d7a3da24dac2925053ba157a96ed51 144 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 54 135 1.2E-13 T 12-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein YpsIP31758_4058 00c0e5c04e4c73da58edbc0653a440d8 745 Pfam PF05170 AsmA family 1 638 2.3E-118 T 12-10-2018 IPR007844 AsmA YpsIP31758_4059 149e0504dddbf2cc6b99ff9d55193462 275 Gene3D G3DSA:3.20.20.450 37 270 3.3E-34 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_4059 149e0504dddbf2cc6b99ff9d55193462 275 SUPERFAMILY SSF141868 43 268 1.57E-28 T 12-10-2018 IPR035919 EAL domain superfamily YpsIP31758_4059 149e0504dddbf2cc6b99ff9d55193462 275 SMART SM00052 35 265 5.6E-11 T 12-10-2018 IPR001633 EAL domain YpsIP31758_4059 149e0504dddbf2cc6b99ff9d55193462 275 Pfam PF00563 EAL domain 44 260 4.0E-27 T 12-10-2018 IPR001633 EAL domain YpsIP31758_1444 d8cb932fc38853eddc47e2018fc54b18 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.2E-58 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 YpsIP31758_1444 d8cb932fc38853eddc47e2018fc54b18 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.795 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 YpsIP31758_2079 00521f69da72f3f7821dafaeb7f407ca 298 Gene3D G3DSA:3.40.50.1820 25 291 4.2E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_2079 00521f69da72f3f7821dafaeb7f407ca 298 Pfam PF07859 alpha/beta hydrolase fold 73 268 5.9E-27 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 YpsIP31758_2079 00521f69da72f3f7821dafaeb7f407ca 298 SUPERFAMILY SSF53474 56 288 8.03E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold YpsIP31758_4126 8427f806598536207bf4a15c9a7a43be 184 SUPERFAMILY SSF158668 6 170 2.22E-58 T 12-10-2018 IPR038026 MtlR-like superfamily YpsIP31758_4126 8427f806598536207bf4a15c9a7a43be 184 Gene3D G3DSA:1.20.120.330 3 172 4.7E-62 T 12-10-2018 YpsIP31758_4126 8427f806598536207bf4a15c9a7a43be 184 Pfam PF05068 Mannitol repressor 9 170 6.9E-63 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like YpsIP31758_0816 7c055fe05f174e0c86e8c26a3ca75e3e 366 Pfam PF01497 Periplasmic binding protein 75 308 1.8E-22 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_0816 7c055fe05f174e0c86e8c26a3ca75e3e 366 Gene3D G3DSA:3.40.50.1980 18 364 1.2E-89 T 12-10-2018 YpsIP31758_0816 7c055fe05f174e0c86e8c26a3ca75e3e 366 SUPERFAMILY SSF53807 19 334 8.63E-47 T 12-10-2018 YpsIP31758_3437 3ae9846a38b6e114b168de7d17d80d3f 337 Pfam PF06812 ImpA, N-terminal, type VI secretion system 21 129 4.5E-12 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_1776 d9d73f2f3a8fb224dd8350383e4f796a 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 5.0E-44 T 12-10-2018 IPR020317 Uncharacterised protein family YjbD YpsIP31758_1776 d9d73f2f3a8fb224dd8350383e4f796a 87 Pfam PF11656 YjbD family (DUF3811) 1 87 2.7E-39 T 12-10-2018 IPR020317 Uncharacterised protein family YjbD YpsIP31758_2731 f39276d7c8a05bced86eedf50ad92e7d 259 Gene3D G3DSA:3.90.1340.10 102 155 1.4E-25 T 12-10-2018 IPR037053 Phage tail collar domain superfamily YpsIP31758_2731 f39276d7c8a05bced86eedf50ad92e7d 259 Pfam PF07484 Phage Tail Collar Domain 107 154 2.6E-12 T 12-10-2018 IPR011083 Phage tail collar domain YpsIP31758_2731 f39276d7c8a05bced86eedf50ad92e7d 259 SUPERFAMILY SSF88874 96 258 2.49E-44 T 12-10-2018 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 Gene3D G3DSA:3.20.20.70 1 220 3.5E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 SUPERFAMILY SSF51569 1 216 4.61E-63 T 12-10-2018 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 4.8E-81 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YpsIP31758_1908 7cbb1657b4f9497d8fc8b8911f0f4e77 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 2.3E-43 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YpsIP31758_0190 e15bcf4c2dee78f4747bb44f3a83ea2c 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.7E-10 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YpsIP31758_0190 e15bcf4c2dee78f4747bb44f3a83ea2c 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.614 T 12-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 YpsIP31758_2270 c4ce22edc12fb411d74c63a19e90455c 123 Gene3D G3DSA:1.10.10.10 39 115 2.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2270 c4ce22edc12fb411d74c63a19e90455c 123 SUPERFAMILY SSF46785 49 101 8.86E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_B0044 4624a302ec78827c54b61118c2b5cd31 68 Gene3D G3DSA:1.20.1280.40 2 68 5.4E-25 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_B0044 4624a302ec78827c54b61118c2b5cd31 68 SUPERFAMILY SSF68989 2 68 2.35E-22 T 12-10-2018 IPR036666 HHA superfamily YpsIP31758_B0044 4624a302ec78827c54b61118c2b5cd31 68 Pfam PF05321 Haemolysin expression modulating protein 9 65 3.5E-20 T 12-10-2018 IPR007985 Haemolysin expression modulating, HHA YpsIP31758_0952 c23ae114ae2a6f1372a6d9090fa23cb5 167 Gene3D G3DSA:2.30.30.830 104 166 1.8E-13 T 12-10-2018 YpsIP31758_0952 c23ae114ae2a6f1372a6d9090fa23cb5 167 Pfam PF11356 Type II secretion system protein C 27 164 4.3E-11 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal YpsIP31758_1630 2608f8b608e62b1fc044d913a96e4b23 63 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.389 T 12-10-2018 IPR019717 Dextransucrase DSRB YpsIP31758_1630 2608f8b608e62b1fc044d913a96e4b23 63 Pfam PF10781 Dextransucrase DSRB 1 60 3.2E-38 T 12-10-2018 IPR019717 Dextransucrase DSRB YpsIP31758_B0112 8a5684d3ab3bf176906014507d0f46b3 151 Gene3D G3DSA:3.55.50.60 28 151 3.1E-12 T 12-10-2018 IPR038140 DotD superfamily YpsIP31758_B0112 8a5684d3ab3bf176906014507d0f46b3 151 Pfam PF16816 DotD protein 75 150 2.3E-12 T 12-10-2018 IPR031817 DotD protein YpsIP31758_A0022 5899d4339af0cb544ff456850f2ff8c4 77 PIRSF PIRSF017849 1 76 8.0E-25 T 12-10-2018 IPR016703 Conjugal transfer, TraD, beta/gamma-type YpsIP31758_0424 98f56058f10323ad8d040ccc2fbae2c6 93 SUPERFAMILY SSF52038 1 87 1.31E-28 T 12-10-2018 IPR035905 Barstar-like superfamily YpsIP31758_0424 98f56058f10323ad8d040ccc2fbae2c6 93 Pfam PF01337 Barstar (barnase inhibitor) 6 80 3.8E-11 T 12-10-2018 IPR000468 Barstar (barnase inhibitor) YpsIP31758_0424 98f56058f10323ad8d040ccc2fbae2c6 93 Gene3D G3DSA:3.30.370.10 1 89 3.3E-35 T 12-10-2018 IPR035905 Barstar-like superfamily YpsIP31758_1591 bfb8db4e828ec1e83ddf7360a491653f 288 Hamap MF_01604 Thiamine kinase [thiK]. 9 284 41.969 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 YpsIP31758_1591 bfb8db4e828ec1e83ddf7360a491653f 288 Pfam PF01636 Phosphotransferase enzyme family 31 234 8.4E-16 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase YpsIP31758_1591 bfb8db4e828ec1e83ddf7360a491653f 288 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 27 284 2.1E-108 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 YpsIP31758_1591 bfb8db4e828ec1e83ddf7360a491653f 288 SUPERFAMILY SSF56112 10 285 1.28E-37 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily YpsIP31758_1591 bfb8db4e828ec1e83ddf7360a491653f 288 Gene3D G3DSA:3.90.1200.10 108 285 3.9E-18 T 12-10-2018 YpsIP31758_2715 4d44c3e1a1c9ab52894688b9cf30be18 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 6.0E-63 T 12-10-2018 IPR020489 Uncharacterised protein family YejG YpsIP31758_2715 4d44c3e1a1c9ab52894688b9cf30be18 114 Pfam PF13989 YejG-like protein 4 108 2.1E-51 T 12-10-2018 IPR020489 Uncharacterised protein family YejG YpsIP31758_1666 3e38d801c76b3184e1ff0b10b2027153 163 Pfam PF05229 Spore Coat Protein U domain 18 160 7.7E-35 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_1666 3e38d801c76b3184e1ff0b10b2027153 163 SMART SM00972 105 160 2.9E-19 T 12-10-2018 IPR007893 Spore coat protein U YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.5E-73 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 SUPERFAMILY SSF52540 4 286 1.7E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 YpsIP31758_3942 7f10256aa05658e9aad314bec0fe9476 289 Gene3D G3DSA:3.40.50.300 1 289 2.5E-115 T 12-10-2018 YpsIP31758_B0084 884608f3622cc30d1c78b7bddc0aca69 116 SUPERFAMILY SSF89447 11 55 6.63E-5 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily YpsIP31758_2630 8df7a6e8bec0da6e2bd6ead7869417ce 281 SUPERFAMILY SSF103481 177 277 1.96E-12 T 12-10-2018 YpsIP31758_2630 8df7a6e8bec0da6e2bd6ead7869417ce 281 Pfam PF00892 EamA-like transporter family 4 133 5.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2630 8df7a6e8bec0da6e2bd6ead7869417ce 281 Pfam PF00892 EamA-like transporter family 146 270 1.8E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2630 8df7a6e8bec0da6e2bd6ead7869417ce 281 SUPERFAMILY SSF103481 38 136 3.92E-14 T 12-10-2018 YpsIP31758_1702 518286dc81da5b21af433b91689c2e51 297 Pfam PF00950 ABC 3 transport family 14 268 1.5E-98 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 YpsIP31758_1702 518286dc81da5b21af433b91689c2e51 297 Gene3D G3DSA:1.10.3470.10 46 272 2.4E-9 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_1702 518286dc81da5b21af433b91689c2e51 297 SUPERFAMILY SSF81345 5 266 2.62E-45 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_3785 050afd9551a756d81f171b8a01f8ea3a 192 Pfam PF02342 TerD domain 1 187 1.8E-86 T 12-10-2018 IPR003325 TerD domain YpsIP31758_3785 050afd9551a756d81f171b8a01f8ea3a 192 Gene3D G3DSA:2.60.60.30 19 186 1.7E-79 T 12-10-2018 YpsIP31758_1566 b55fa417400f894776178115b8a3742b 81 Pfam PF06183 DinI-like family 14 78 1.5E-29 T 12-10-2018 IPR010391 DNA damage-inducible protein DinI-like YpsIP31758_1566 b55fa417400f894776178115b8a3742b 81 SUPERFAMILY SSF54857 1 80 1.01E-29 T 12-10-2018 IPR036687 DinI-like superfamily YpsIP31758_1566 b55fa417400f894776178115b8a3742b 81 Gene3D G3DSA:3.30.910.10 1 81 5.6E-36 T 12-10-2018 IPR036687 DinI-like superfamily YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Gene3D G3DSA:2.160.20.10 38 326 1.0E-75 T 12-10-2018 IPR012334 Pectin lyase fold YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 SUPERFAMILY SSF51126 48 313 4.39E-54 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 471 540 0.0044 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 394 455 9.6E-6 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 622 781 1.8E-18 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 802 887 3.8E-8 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 1216 1388 2.3E-31 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF13332 Haemagluttinin repeat 1031 1151 2.9E-13 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 Pfam PF05860 haemagglutination activity domain 47 167 9.3E-29 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 156 1.1E-16 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_0299 29916d0f10e083d5c16966d3c62c4531 1618 SMART SM00912 48 168 4.2E-43 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal YpsIP31758_A0050 88c69e8273d6002459d7e8639e7d1908 845 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 220 431 6.7E-51 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 YpsIP31758_A0050 88c69e8273d6002459d7e8639e7d1908 845 SUPERFAMILY SSF52540 472 789 2.55E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0050 88c69e8273d6002459d7e8639e7d1908 845 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 37 833 3.0E-203 T 12-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 YpsIP31758_A0050 88c69e8273d6002459d7e8639e7d1908 845 Gene3D G3DSA:3.40.50.300 622 806 1.0E-23 T 12-10-2018 YpsIP31758_A0050 88c69e8273d6002459d7e8639e7d1908 845 Gene3D G3DSA:3.40.50.300 467 616 1.2E-5 T 12-10-2018 YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 Pfam PF03466 LysR substrate binding domain 93 297 2.1E-36 T 12-10-2018 IPR005119 LysR, substrate-binding YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 Gene3D G3DSA:1.10.10.10 4 95 6.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 SUPERFAMILY SSF46785 3 84 1.36E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 Gene3D G3DSA:3.40.190.290 96 304 1.9E-34 T 12-10-2018 YpsIP31758_0970 cded00367269437a5f1fab34e5af1703 313 SUPERFAMILY SSF53850 95 298 1.18E-37 T 12-10-2018 YpsIP31758_4007 880b7792a2419ec4e6fac961897ee812 565 SUPERFAMILY SSF55874 426 558 4.93E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_4007 880b7792a2419ec4e6fac961897ee812 565 Pfam PF06580 Histidine kinase 373 450 2.7E-25 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 YpsIP31758_4007 880b7792a2419ec4e6fac961897ee812 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 2.0E-58 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 YpsIP31758_4007 880b7792a2419ec4e6fac961897ee812 565 SUPERFAMILY SSF55781 236 357 4.61E-5 T 12-10-2018 YpsIP31758_4007 880b7792a2419ec4e6fac961897ee812 565 Gene3D G3DSA:3.30.565.10 425 559 1.3E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YpsIP31758_2737 c0aa5735efb5d20ffa54316384e4dedf 468 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 21 120 2.0E-55 T 12-10-2018 IPR009826 DNA circulation, N-terminal YpsIP31758_2737 c0aa5735efb5d20ffa54316384e4dedf 468 Pfam PF07157 DNA circularisation protein N-terminus 25 118 3.6E-33 T 12-10-2018 IPR009826 DNA circulation, N-terminal YpsIP31758_1499 f776ab3f3ed24c402516846eba6c6f11 165 Pfam PF00583 Acetyltransferase (GNAT) family 33 133 8.9E-12 T 12-10-2018 IPR000182 GNAT domain YpsIP31758_1499 f776ab3f3ed24c402516846eba6c6f11 165 SUPERFAMILY SSF55729 1 158 2.74E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_1499 f776ab3f3ed24c402516846eba6c6f11 165 Gene3D G3DSA:3.40.630.30 2 165 1.3E-45 T 12-10-2018 YpsIP31758_2226 6f899df2f9502b0b90511a574a554a51 79 Pfam PF04221 RelB antitoxin 1 70 2.5E-20 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ YpsIP31758_2226 6f899df2f9502b0b90511a574a554a51 79 Gene3D G3DSA:1.10.1220.10 1 79 1.0E-34 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YpsIP31758_2226 6f899df2f9502b0b90511a574a554a51 79 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 79 4.4E-19 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ YpsIP31758_4161 2f31dfcd87a34f34e04433c395b3c883 442 Pfam PF00860 Permease family 29 402 9.6E-44 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_4161 2f31dfcd87a34f34e04433c395b3c883 442 PIRSF PIRSF005353 3 442 7.4E-178 T 12-10-2018 IPR026033 Purine permease PbuG-like YpsIP31758_0762 860b49e92edddca88f36d1bedc7de926 209 Pfam PF11726 Inovirus Gp2 21 207 1.8E-51 T 12-10-2018 YpsIP31758_0440 ee33c7c2b815b6057cf067134adc9524 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 7.9E-29 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YpsIP31758_0440 ee33c7c2b815b6057cf067134adc9524 95 SUPERFAMILY SSF69754 1 95 5.36E-36 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like YpsIP31758_0440 ee33c7c2b815b6057cf067134adc9524 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.2E-36 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YpsIP31758_0440 ee33c7c2b815b6057cf067134adc9524 95 Gene3D G3DSA:3.30.160.100 1 95 2.7E-39 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like YpsIP31758_2137 8b73b218f7173fa11a2f18f2b947eb0e 376 Pfam PF12704 MacB-like periplasmic core domain 28 192 4.4E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain YpsIP31758_2137 8b73b218f7173fa11a2f18f2b947eb0e 376 Pfam PF02687 FtsX-like permease family 281 369 1.3E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 Pfam PF02120 Flagellar hook-length control protein FliK 317 399 1.1E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 332 350 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 284 306 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 365 388 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 350 365 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 74 91 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 PRINTS PR01007 Flagellar hook-length control protein signature 307 329 5.1E-37 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YpsIP31758_2295 6d8fc58ff30792bce5a722d73cca7be7 452 Gene3D G3DSA:3.30.750.140 297 410 5.9E-38 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily YpsIP31758_1911 fa44309a42341fee4ce3296e18590a4c 71 Pfam PF05433 Glycine zipper 2TM domain 34 70 6.6E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 YpsIP31758_1019 9f51702f299d9c4c0274c26c373c200e 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 YpsIP31758_1019 9f51702f299d9c4c0274c26c373c200e 282 Pfam PF01148 Cytidylyltransferase family 4 279 2.5E-71 T 12-10-2018 YpsIP31758_B0015 ccba613414e3975f2e88bfc9e8692f3c 511 Pfam PF06864 Pilin accessory protein (PilO) 166 509 1.4E-54 T 12-10-2018 IPR009663 Pilin accessory predicted YpsIP31758_B0015 ccba613414e3975f2e88bfc9e8692f3c 511 Pfam PF06864 Pilin accessory protein (PilO) 24 113 6.1E-18 T 12-10-2018 IPR009663 Pilin accessory predicted YpsIP31758_1924 7984ace4a202e59e69816070b4ac0d65 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 1.6E-43 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 YpsIP31758_1924 7984ace4a202e59e69816070b4ac0d65 83 Gene3D G3DSA:1.10.1900.30 9 77 1.7E-37 T 12-10-2018 IPR038191 YciN superfamily YpsIP31758_3702 61edfb047c886dde7622d104cf6e89fa 134 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 19 130 1.5E-41 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 YpsIP31758_3702 61edfb047c886dde7622d104cf6e89fa 134 Pfam PF07511 Protein of unknown function (DUF1525) 19 131 3.6E-33 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 YpsIP31758_0310 7abc0155ea8ad1af244dd30489ae39a5 303 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 74 206 3.7E-53 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 YpsIP31758_B0119 237dfb1c18fd7b5c7995cec3706bbcfa 239 SMART SM00507 40 90 5.1E-7 T 12-10-2018 IPR003615 HNH nuclease YpsIP31758_3417 c647ae4bef35264332401bcefab4ff42 255 Pfam PF09335 SNARE associated Golgi protein 36 159 1.5E-19 T 12-10-2018 IPR032816 SNARE associated Golgi protein YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 1.7E-143 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 1.1E-146 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 4.5E-97 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PIRSF PIRSF006060 13 306 2.6E-11 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 PIRSF PIRSF006060 307 413 7.6 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2697 a5acad92498d5be04e128051c9d2c3ee 414 Gene3D G3DSA:1.20.1740.10 11 414 1.5E-6 T 12-10-2018 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 29 44 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 44 59 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 1.4E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 Pfam PF02119 Flagellar P-ring protein 32 371 7.3E-130 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0646 971fccfa2e7bd5f9c88528501338dce5 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 372 35.704 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YpsIP31758_0038 1829953227a41b5bb1c8b893adf791dc 230 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.984 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 YpsIP31758_0038 1829953227a41b5bb1c8b893adf791dc 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 7.0E-36 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YpsIP31758_0038 1829953227a41b5bb1c8b893adf791dc 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 8.5E-25 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 YpsIP31758_0038 1829953227a41b5bb1c8b893adf791dc 230 SUPERFAMILY SSF75217 4 174 2.16E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases YpsIP31758_0038 1829953227a41b5bb1c8b893adf791dc 230 Gene3D G3DSA:3.40.1280.10 1 190 9.0E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YpsIP31758_2403 e969e48a271dfac6e1156e49a4f0617a 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.5E-57 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 YpsIP31758_2669 d8a8dedf5cd9b1fd04e67dded714c144 389 Pfam PF01497 Periplasmic binding protein 115 329 2.3E-23 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain YpsIP31758_2669 d8a8dedf5cd9b1fd04e67dded714c144 389 Gene3D G3DSA:3.40.50.1980 39 385 6.0E-108 T 12-10-2018 YpsIP31758_2669 d8a8dedf5cd9b1fd04e67dded714c144 389 SUPERFAMILY SSF53807 42 377 1.31E-54 T 12-10-2018 YpsIP31758_2080 1d6db9c9d9f38e6646e54e15ae1d647b 217 SUPERFAMILY SSF53822 2 196 8.95E-7 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3275 5bef47e2c232dd9654a497ce4c1253fb 427 Pfam PF07906 ShET2 enterotoxin, N-terminal region 10 280 3.1E-104 T 12-10-2018 IPR012927 ShET2 enterotoxin, N-terminal YpsIP31758_2307 e2249611d39586f559d9f121058673e1 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 330 2.6E-40 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1283 ef8fb79907a2abb1880f6d4845374b35 223 SUPERFAMILY SSF46785 69 120 2.4E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 5.5E-169 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 67.713 T 12-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 Gene3D G3DSA:3.40.50.2000 2 367 3.1E-155 T 12-10-2018 YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 Gene3D G3DSA:3.40.50.2000 187 356 3.1E-155 T 12-10-2018 YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.6E-126 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 YpsIP31758_0184 df9b355abae7e4496591115ce08afdfc 376 SUPERFAMILY SSF53756 2 372 8.17E-142 T 12-10-2018 YpsIP31758_0814 ba134c215af72f4b44cf0d9c45ea2313 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 316 4.2E-45 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0948 4022be5deff6efccc5c52c4088b43e3c 316 Pfam PF16946 OMPG-porin 1 family 131 316 3.7E-9 T 12-10-2018 IPR031605 Putative OMPG-porin 1 family YpsIP31758_1998 28876950a3b7bf17719f8876883d2e47 511 Pfam PF04293 SpoVR like protein 20 451 6.4E-176 T 12-10-2018 IPR007390 Sporulation stage V, protein R YpsIP31758_3253 72e1b3537f4c5d1e085de1b353add4bc 313 SUPERFAMILY SSF53822 28 305 3.83E-77 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_3253 72e1b3537f4c5d1e085de1b353add4bc 313 Gene3D G3DSA:3.40.50.2300 36 283 7.5E-91 T 12-10-2018 YpsIP31758_3253 72e1b3537f4c5d1e085de1b353add4bc 313 Pfam PF13407 Periplasmic binding protein domain 29 284 7.0E-58 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_3253 72e1b3537f4c5d1e085de1b353add4bc 313 Gene3D G3DSA:3.40.50.2300 130 264 7.5E-91 T 12-10-2018 YpsIP31758_1686 fc8fe09d46023afbbc71d832b2fedfbd 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 163 1.0E-35 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YpsIP31758_1686 fc8fe09d46023afbbc71d832b2fedfbd 182 PIRSF PIRSF030780 1 182 2.2E-106 T 12-10-2018 IPR016956 Inner membrane protein YdjM YpsIP31758_3503 5cf3a694337a5866486b66a8da2d98d2 204 SMART SM00749 62 125 9.5E-11 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria YpsIP31758_3503 5cf3a694337a5866486b66a8da2d98d2 204 SMART SM00749 141 204 2.6E-12 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria YpsIP31758_3503 5cf3a694337a5866486b66a8da2d98d2 204 Pfam PF04972 BON domain 137 204 2.5E-18 T 12-10-2018 IPR007055 BON domain YpsIP31758_3503 5cf3a694337a5866486b66a8da2d98d2 204 Pfam PF04972 BON domain 57 124 2.1E-22 T 12-10-2018 IPR007055 BON domain YpsIP31758_0598 b0ffe5e15faab97b8cf1de0756aada78 291 Pfam PF00482 Type II secretion system (T2SS), protein F 127 247 1.6E-17 T 12-10-2018 IPR018076 Type II secretion system F domain YpsIP31758_0823 ba82f0d68fac58b632fa7f1042565f64 244 Pfam PF11101 Protein of unknown function (DUF2884) 29 243 2.2E-46 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 YpsIP31758_0235 b3d46fdd4345f7111df1a882dc327792 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.2E-40 T 12-10-2018 IPR014949 Protein of unknown function DUF1820 YpsIP31758_0235 b3d46fdd4345f7111df1a882dc327792 106 PIRSF PIRSF028538 1 106 9.4E-44 T 12-10-2018 IPR014949 Protein of unknown function DUF1820 YpsIP31758_1176 1d6d3904badd36d46a63f92edaae59e4 305 Pfam PF14581 SseB protein C-terminal domain 180 290 1.0E-34 T 12-10-2018 IPR027945 SseB protein, C-terminal YpsIP31758_1176 1d6d3904badd36d46a63f92edaae59e4 305 Pfam PF07179 SseB protein N-terminal domain 36 164 3.3E-29 T 12-10-2018 IPR009839 SseB protein N-terminal domain YpsIP31758_3733 030a6ab3639fd5582da5d515bd4ceba4 445 Pfam PF06864 Pilin accessory protein (PilO) 24 443 3.5E-63 T 12-10-2018 IPR009663 Pilin accessory predicted YpsIP31758_2924 1ebea9e2c51dafa0db5bda58d20550aa 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 3.3E-54 T 12-10-2018 IPR009912 Zinc-ribbon containing domain YpsIP31758_3855 a2010103e74a982cba6b0886b6afa5d1 265 Gene3D G3DSA:3.40.50.720 7 264 1.0E-93 T 12-10-2018 YpsIP31758_3855 a2010103e74a982cba6b0886b6afa5d1 265 SUPERFAMILY SSF69572 5 263 1.2E-79 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 YpsIP31758_3855 a2010103e74a982cba6b0886b6afa5d1 265 Pfam PF00899 ThiF family 15 258 7.8E-62 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YpsIP31758_2163 361aa33f5a7f20b293dec83b6f1327ea 176 Pfam PF00419 Fimbrial protein 26 175 5.3E-11 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_2163 361aa33f5a7f20b293dec83b6f1327ea 176 Gene3D G3DSA:2.60.40.1090 22 176 2.9E-26 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_2163 361aa33f5a7f20b293dec83b6f1327ea 176 SUPERFAMILY SSF49401 25 175 5.97E-26 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_3710 6c2b5634c2d0af26135db5e57bfc3cda 124 Pfam PF11990 Protein of unknown function (DUF3487) 4 115 2.3E-33 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 YpsIP31758_3710 6c2b5634c2d0af26135db5e57bfc3cda 124 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 114 4.9E-40 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 YpsIP31758_1606 83bad1f35ab23af038158d78ae773844 373 Gene3D G3DSA:2.60.120.650 2 204 2.1E-86 T 12-10-2018 YpsIP31758_1606 83bad1f35ab23af038158d78ae773844 373 Gene3D G3DSA:1.10.10.2510 205 373 2.9E-62 T 12-10-2018 YpsIP31758_1606 83bad1f35ab23af038158d78ae773844 373 Pfam PF08007 Cupin superfamily protein 10 310 1.5E-101 T 12-10-2018 IPR003347 JmjC domain YpsIP31758_1606 83bad1f35ab23af038158d78ae773844 373 SMART SM00558 87 215 1.5E-9 T 12-10-2018 IPR003347 JmjC domain YpsIP31758_1606 83bad1f35ab23af038158d78ae773844 373 SUPERFAMILY SSF51197 7 289 6.73E-75 T 12-10-2018 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 5.5E-86 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 SUPERFAMILY SSF51569 4 209 4.4E-70 T 12-10-2018 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 Gene3D G3DSA:3.20.20.70 1 212 8.6E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YpsIP31758_2021 5ab070fda2256c15fc843f4235dc45fe 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.3E-90 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YpsIP31758_3452 45dfdc78ef4b46f8d8a990a797d28dbc 204 Pfam PF01810 LysE type translocator 15 203 5.4E-37 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_3452 45dfdc78ef4b46f8d8a990a797d28dbc 204 PIRSF PIRSF006324 1 204 4.4E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 YpsIP31758_1377 72f3de16471b1d13cbc974c0d5d63159 268 SUPERFAMILY SSF144059 5 265 6.8E-86 T 12-10-2018 YpsIP31758_1377 72f3de16471b1d13cbc974c0d5d63159 268 Pfam PF07024 ImpE protein 145 261 1.3E-41 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type YpsIP31758_1377 72f3de16471b1d13cbc974c0d5d63159 268 Gene3D G3DSA:1.25.40.10 7 89 3.8E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1377 72f3de16471b1d13cbc974c0d5d63159 268 PIRSF PIRSF029288 1 268 1.1E-99 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type YpsIP31758_2999 2a735456384e18c8d56002056055c34a 329 SUPERFAMILY SSF51430 1 314 1.19E-101 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_2999 2a735456384e18c8d56002056055c34a 329 Pfam PF00248 Aldo/keto reductase family 16 308 1.5E-73 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain YpsIP31758_2999 2a735456384e18c8d56002056055c34a 329 Gene3D G3DSA:3.20.20.100 1 328 5.8E-118 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YpsIP31758_3740 e1bd569c43cfe1acee9cb223deed22aa 180 Pfam PF12101 Protein of unknown function (DUF3577) 34 161 5.5E-51 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 YpsIP31758_3188 04fc955117c7728dd5d880804a6fe678 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 3.3E-30 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 YpsIP31758_3188 04fc955117c7728dd5d880804a6fe678 217 Gene3D G3DSA:1.10.3720.10 5 213 2.4E-46 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3188 04fc955117c7728dd5d880804a6fe678 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 210 6.0E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_3188 04fc955117c7728dd5d880804a6fe678 217 SUPERFAMILY SSF161098 12 203 1.24E-39 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_0933 82915387673a3ff300cbdb19c951e0d1 352 Gene3D G3DSA:1.50.10.10 7 352 1.1E-105 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 YpsIP31758_0933 82915387673a3ff300cbdb19c951e0d1 352 SUPERFAMILY SSF48208 36 351 1.59E-52 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YpsIP31758_0933 82915387673a3ff300cbdb19c951e0d1 352 Pfam PF07470 Glycosyl Hydrolase Family 88 41 351 2.7E-72 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 YpsIP31758_B0074 1f8b7567f465a49d5870aa8c77edf49f 279 Gene3D G3DSA:3.30.200.20 124 198 3.5E-18 T 12-10-2018 YpsIP31758_B0074 1f8b7567f465a49d5870aa8c77edf49f 279 Gene3D G3DSA:1.10.510.10 199 278 2.1E-18 T 12-10-2018 YpsIP31758_B0108 bb4a89a10fabf82a634aed06ff10b024 209 SUPERFAMILY SSF52540 1 186 6.9E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_B0108 bb4a89a10fabf82a634aed06ff10b024 209 Gene3D G3DSA:3.40.50.300 4 208 3.6E-31 T 12-10-2018 YpsIP31758_B0108 bb4a89a10fabf82a634aed06ff10b024 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 169 1.0E-8 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YpsIP31758_B0108 bb4a89a10fabf82a634aed06ff10b024 209 PIRSF PIRSF009320 2 208 2.9E-25 T 12-10-2018 YpsIP31758_4074 d399ccc3315be852171df666a1f5b2ee 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.1E-47 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_4074 d399ccc3315be852171df666a1f5b2ee 339 SUPERFAMILY SSF161098 89 322 7.52E-23 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 SUPERFAMILY SSF53254 1 209 4.06E-58 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 PIRSF PIRSF000709 2 175 3.9E-11 T 12-10-2018 YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 SMART SM00855 3 157 2.4E-23 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 Gene3D G3DSA:3.40.50.1240 1 212 3.3E-58 T 12-10-2018 IPR029033 Histidine phosphatase superfamily YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 9.3E-59 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 YpsIP31758_3480 66ceb75f8fd65fc058d46a72ec56d96a 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 51.058 T 12-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 YpsIP31758_2775 249033f6ae72e31759b13ae9c0ad6e09 180 SUPERFAMILY SSF56925 38 180 2.04E-11 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_2775 249033f6ae72e31759b13ae9c0ad6e09 180 Pfam PF07437 YfaZ precursor 1 180 1.2E-91 T 12-10-2018 IPR009998 YfaZ YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 Pfam PF00813 FliP family 59 249 2.7E-74 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 182 197 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 59 252 1.1E-72 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 182 202 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 76 96 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 252 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 76 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 96 115 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 203 224 1.3E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 127 1.5E-11 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 243 253 1.5E-11 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 55 64 1.5E-11 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 175 187 1.5E-11 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0626 1235624306bf0584120f1a2857b012c8 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 127 141 1.5E-11 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YpsIP31758_0574 a264fbdf510f077e983dfc44e53e81cc 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 4.9E-78 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 YpsIP31758_0574 a264fbdf510f077e983dfc44e53e81cc 210 Gene3D G3DSA:3.90.79.10 2 209 5.6E-66 T 12-10-2018 YpsIP31758_0574 a264fbdf510f077e983dfc44e53e81cc 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YpsIP31758_0574 a264fbdf510f077e983dfc44e53e81cc 210 Pfam PF00293 NUDIX domain 59 179 5.4E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YpsIP31758_0574 a264fbdf510f077e983dfc44e53e81cc 210 SUPERFAMILY SSF55811 9 205 2.03E-49 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YpsIP31758_0853 99950193b776db97360dfbbb5fb7601a 259 Gene3D G3DSA:3.30.70.2970 46 153 4.8E-51 T 12-10-2018 YpsIP31758_0853 99950193b776db97360dfbbb5fb7601a 259 Gene3D G3DSA:3.30.110.170 37 238 4.8E-51 T 12-10-2018 YpsIP31758_0853 99950193b776db97360dfbbb5fb7601a 259 Pfam PF04402 Protein of unknown function (DUF541) 36 237 1.7E-44 T 12-10-2018 IPR007497 Protein of unknown function DUF541 YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.036 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 SUPERFAMILY SSF53633 7 239 6.28E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 Pfam PF00696 Amino acid kinase family 11 219 9.0E-28 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 3.4E-104 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 PIRSF PIRSF005650 4 241 2.8E-90 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 YpsIP31758_1015 1da0de38868595c37a500222ecedbddd 241 Gene3D G3DSA:3.40.1160.10 3 241 9.8E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YpsIP31758_2230 256d0c130f9bc0752af5231f09509b4d 204 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 20 202 4.0E-5 T 12-10-2018 IPR020291 DNA modification protein Mom YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 52.775 T 12-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 3.7E-82 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 SUPERFAMILY SSF47781 16 83 5.34E-11 T 12-10-2018 IPR010994 RuvA domain 2-like YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 Pfam PF04002 RadC-like JAB domain 107 220 2.0E-43 T 12-10-2018 IPR025657 RadC-like JAB domain YpsIP31758_0061 13f0a0c8e0ce38c84603441951afeb6d 222 Gene3D G3DSA:3.40.140.10 101 222 9.2E-44 T 12-10-2018 YpsIP31758_3743 b136bf9ff06f20baa5dc484c742d88de 399 Pfam PF13730 Helix-turn-helix domain 55 115 2.9E-10 T 12-10-2018 YpsIP31758_0192 d5e02834562b6b5df86c14833bb67507 454 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.455 T 12-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 YpsIP31758_0192 d5e02834562b6b5df86c14833bb67507 454 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 2.5E-263 T 12-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 YpsIP31758_0748 b56ba286b27b7e55f5bba168bfe1cd33 118 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 11 100 2.6E-31 T 12-10-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system YpsIP31758_2413 cb3a8dcc9838aad85910faebd241f1e5 140 Pfam PF04134 Protein of unknown function, DUF393 15 124 4.9E-35 T 12-10-2018 IPR007263 Protein of unknown function DUF393 YpsIP31758_B0070 bd60ac6dad0bbb6668677542a2b0ae4b 264 Pfam PF13988 Protein of unknown function (DUF4225) 75 236 6.3E-39 T 12-10-2018 IPR025320 Protein of unknown function DUF4225 YpsIP31758_2166 a875077af028fea8f97246d4af5af65b 425 Pfam PF00419 Fimbrial protein 239 425 2.2E-37 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_2166 a875077af028fea8f97246d4af5af65b 425 SUPERFAMILY SSF49401 245 422 8.45E-8 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_2166 a875077af028fea8f97246d4af5af65b 425 PIRSF PIRSF029766 1 425 3.3E-186 T 12-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 YpsIP31758_2650 4bca1568581c7e9dd712cb35a333b90c 271 SUPERFAMILY SSF48317 47 260 3.92E-12 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YpsIP31758_2650 4bca1568581c7e9dd712cb35a333b90c 271 Pfam PF01569 PAP2 superfamily 136 260 2.5E-8 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YpsIP31758_2650 4bca1568581c7e9dd712cb35a333b90c 271 Gene3D G3DSA:1.20.144.10 178 271 3.4E-7 T 12-10-2018 YpsIP31758_3523 5dc0eb16c5b541c83a3c6ab5b63e36a3 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 1.8E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2439 8929bd5f20d7c901caff5a51d455a996 604 Gene3D G3DSA:1.10.510.40 388 595 1.3E-66 T 12-10-2018 YpsIP31758_2439 8929bd5f20d7c901caff5a51d455a996 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 421 578 3.3E-38 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain YpsIP31758_2439 8929bd5f20d7c901caff5a51d455a996 604 Gene3D G3DSA:1.10.274.90 3 139 6.8E-43 T 12-10-2018 YpsIP31758_2439 8929bd5f20d7c901caff5a51d455a996 604 Pfam PF04183 IucA / IucC family 150 399 6.0E-76 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 YpsIP31758_4053 1434388ab94ec89f5e82c86abe19cce1 165 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 5 162 4.7E-56 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_2819 8fc4c9957ea6c2ad243d1153e51d087c 369 SUPERFAMILY SSF51395 1 365 3.67E-117 T 12-10-2018 YpsIP31758_2819 8fc4c9957ea6c2ad243d1153e51d087c 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 342 5.9E-90 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YpsIP31758_2819 8fc4c9957ea6c2ad243d1153e51d087c 369 Gene3D G3DSA:3.20.20.70 1 369 5.3E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_1408 8fe627477433e24ffc031e6718edb50b 180 Pfam PF04315 Elongation factor P hydroxylase 11 169 3.0E-79 T 12-10-2018 IPR007411 Elongation factor P hydroxylase YpsIP31758_1899 ef89bf4c6a9d6aad7c3a07bc5eb3b5e1 209 SMART SM00900 100 192 8.5E-35 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 YpsIP31758_1899 ef89bf4c6a9d6aad7c3a07bc5eb3b5e1 209 PIRSF PIRSF006091 1 203 1.5E-71 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YpsIP31758_1899 ef89bf4c6a9d6aad7c3a07bc5eb3b5e1 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.845 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YpsIP31758_1899 ef89bf4c6a9d6aad7c3a07bc5eb3b5e1 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.3E-67 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YpsIP31758_1899 ef89bf4c6a9d6aad7c3a07bc5eb3b5e1 209 Pfam PF04205 FMN-binding domain 100 189 1.1E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 YpsIP31758_3467 59f1180573866770b8d27befde75fc61 203 Pfam PF01184 GPR1/FUN34/yaaH family 4 180 3.4E-44 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 YpsIP31758_3249 10624b9c927226c46243f74e6b0ec4b2 276 Gene3D G3DSA:3.40.50.970 3 276 2.8E-83 T 12-10-2018 YpsIP31758_3249 10624b9c927226c46243f74e6b0ec4b2 276 SUPERFAMILY SSF52518 3 273 1.97E-72 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold YpsIP31758_3249 10624b9c927226c46243f74e6b0ec4b2 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 26 267 3.6E-36 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YpsIP31758_3477 941bc601181af72a6e4cac6df3cf7034 28 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 7 28 1.9E-10 T 12-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 YpsIP31758_3477 941bc601181af72a6e4cac6df3cf7034 28 Hamap MF_01907 thr operon leader peptide [thrL]. 7 28 13.523 T 12-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 YpsIP31758_3477 941bc601181af72a6e4cac6df3cf7034 28 Pfam PF08254 Threonine leader peptide 7 28 5.6E-14 T 12-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 YpsIP31758_0540 ba7b5ab099ad441dfb596f53285ecbe9 145 Gene3D G3DSA:3.30.530.20 4 144 1.2E-31 T 12-10-2018 IPR023393 START-like domain superfamily YpsIP31758_0540 ba7b5ab099ad441dfb596f53285ecbe9 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 115 1.6E-13 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase YpsIP31758_0540 ba7b5ab099ad441dfb596f53285ecbe9 145 SUPERFAMILY SSF55961 2 141 4.4E-24 T 12-10-2018 YpsIP31758_2647 4fb9b927e55646cc660570b6c2cda65a 104 Pfam PF07214 Protein of unknown function (DUF1418) 1 97 1.8E-42 T 12-10-2018 IPR010815 Protein of unknown function DUF1418 YpsIP31758_2783 d46798700a74102c12a4e39407998a8e 278 SUPERFAMILY SSF161098 69 259 6.67E-32 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2783 d46798700a74102c12a4e39407998a8e 278 Gene3D G3DSA:1.10.3720.10 67 266 1.0E-26 T 12-10-2018 IPR035906 MetI-like superfamily YpsIP31758_2783 d46798700a74102c12a4e39407998a8e 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 265 5.9E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YpsIP31758_0801 a62039802616484ffb895c8bfb759b95 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 319 5.3E-71 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_0801 a62039802616484ffb895c8bfb759b95 361 Pfam PF06996 Type VI secretion, TssG 22 319 3.5E-80 T 12-10-2018 IPR010732 Type VI secretion, TssG-like YpsIP31758_3159 dc87ff17e4cb656d9527b16afe02a46d 75 Pfam PF04400 (Na+)-NQR maturation NqrM 23 65 1.7E-22 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM YpsIP31758_1500 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 SUPERFAMILY SSF103481 187 281 9.02E-7 T 12-10-2018 YpsIP31758_1500 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 Pfam PF00892 EamA-like transporter family 150 279 1.1E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1875 210d14eda38b7fc08035e64a00ad1183 514 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 470 4.8E-141 T 12-10-2018 IPR010352 Protein of unknown function DUF945 YpsIP31758_2091 d9cf048577e9e9a84617e95e6190c2ec 310 SUPERFAMILY SSF51182 40 209 2.71E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_A0038 0092f69c4e1a59038333d8c993a3d50f 361 SUPERFAMILY SSF52540 105 358 5.67E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_A0038 0092f69c4e1a59038333d8c993a3d50f 361 Pfam PF13614 AAA domain 106 279 2.5E-31 T 12-10-2018 IPR025669 AAA domain YpsIP31758_A0038 0092f69c4e1a59038333d8c993a3d50f 361 Gene3D G3DSA:3.40.50.300 99 360 9.7E-54 T 12-10-2018 YpsIP31758_0120 565a2fd799ede53726702e8f6e5120c2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YpsIP31758_0120 565a2fd799ede53726702e8f6e5120c2 105 Gene3D G3DSA:1.10.140.10 2 105 7.7E-63 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily YpsIP31758_0120 565a2fd799ede53726702e8f6e5120c2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.3E-58 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YpsIP31758_0120 565a2fd799ede53726702e8f6e5120c2 105 SUPERFAMILY SSF47598 2 105 3.78E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_0120 565a2fd799ede53726702e8f6e5120c2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YpsIP31758_3634 595794c186337972b3cc7ca01042129e 246 Gene3D G3DSA:3.10.450.350 150 244 4.0E-14 T 12-10-2018 YpsIP31758_3634 595794c186337972b3cc7ca01042129e 246 Pfam PF04225 Opacity-associated protein A LysM-like domain 161 245 3.8E-38 T 12-10-2018 IPR007340 Opacity-associated protein A YpsIP31758_3634 595794c186337972b3cc7ca01042129e 246 Pfam PF08525 Opacity-associated protein A N-terminal motif 89 115 7.0E-7 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal YpsIP31758_A0033 ded64d626bff713bf5670e7041f44303 95 SUPERFAMILY SSF116734 10 90 4.25E-5 T 12-10-2018 YpsIP31758_4019 0153a17db8f138cd83b5bcd2e380220e 416 Pfam PF15538 Bacterial toxin 46 255 411 8.9E-51 T 12-10-2018 IPR028238 Bacterial toxin 46 YpsIP31758_0416 56f4d2b055115c0ce011ad927898806f 887 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 21 317 4.0E-16 T 12-10-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein YpsIP31758_0274 239e3e2d3e7ab9d5eabbb903875c264c 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.003 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YpsIP31758_0274 239e3e2d3e7ab9d5eabbb903875c264c 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.7E-20 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YpsIP31758_0274 239e3e2d3e7ab9d5eabbb903875c264c 88 Pfam PF02416 mttA/Hcf106 family 4 56 3.4E-12 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YpsIP31758_2172 890d5751bab24139598433d1b7bc5ffa 422 Pfam PF01547 Bacterial extracellular solute-binding protein 36 333 1.4E-55 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein YpsIP31758_2172 890d5751bab24139598433d1b7bc5ffa 422 SUPERFAMILY SSF53850 22 420 1.52E-77 T 12-10-2018 YpsIP31758_2172 890d5751bab24139598433d1b7bc5ffa 422 Gene3D G3DSA:3.40.190.10 141 412 8.8E-109 T 12-10-2018 YpsIP31758_2172 890d5751bab24139598433d1b7bc5ffa 422 Gene3D G3DSA:3.40.190.10 39 372 8.8E-109 T 12-10-2018 YpsIP31758_0796 5fa99a7a29b42bf090f52671a54a0bd6 534 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 491 5.7E-112 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_0796 5fa99a7a29b42bf090f52671a54a0bd6 534 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 230 491 1.7E-87 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 YpsIP31758_0796 5fa99a7a29b42bf090f52671a54a0bd6 534 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 1.5E-21 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_0036 ca6abf2bda65793d5d9556735b9307ce 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.717 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YpsIP31758_0036 ca6abf2bda65793d5d9556735b9307ce 404 Pfam PF03616 Sodium/glutamate symporter 2 366 2.6E-160 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YpsIP31758_0036 ca6abf2bda65793d5d9556735b9307ce 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.1E-190 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 Pfam PF02107 Flagellar L-ring protein 59 242 5.5E-59 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 Hamap MF_00415 Flagellar L-ring protein [flgH]. 15 241 27.546 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 183 199 4.0E-35 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 84 96 4.0E-35 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 157 172 4.0E-35 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 204 218 4.0E-35 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_2318 4efd3434db576b3931562c304e36605e 243 PRINTS PR01008 Flagellar L-ring protein signature 220 234 4.0E-35 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YpsIP31758_1719 24abeca5f6569bda1c410c7676f07ec8 152 Pfam PF10697 Protein of unknown function (DUF2502) 23 102 1.1E-33 T 12-10-2018 IPR019638 Protein of unknown function DUF2502 YpsIP31758_1748 cac3aea8b2bd48e22554d4669b300f51 78 PIRSF PIRSF002855 1 78 9.7E-29 T 12-10-2018 IPR016367 Murein-lipoprotein YpsIP31758_1748 cac3aea8b2bd48e22554d4669b300f51 78 Gene3D G3DSA:1.20.5.190 22 77 8.4E-31 T 12-10-2018 YpsIP31758_1748 cac3aea8b2bd48e22554d4669b300f51 78 SUPERFAMILY SSF58042 24 73 2.09E-22 T 12-10-2018 YpsIP31758_1748 cac3aea8b2bd48e22554d4669b300f51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 1.4E-24 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 YpsIP31758_1201 ec800d6826c7526e26d16194a9cf9d38 155 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 12 153 5.1E-62 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_3706 905209054ef193d38ea9ac28cff28269 133 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 13 130 2.8E-49 T 12-10-2018 IPR022262 Lipoprotein, putative YpsIP31758_2347 52cc7bdcae57e6ebc7331528e8bdfd22 136 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 25 114 2.0E-47 T 12-10-2018 IPR025603 YebF/Colicin-M immunity protein YpsIP31758_2347 52cc7bdcae57e6ebc7331528e8bdfd22 136 Pfam PF13995 YebF-like protein 27 114 1.3E-39 T 12-10-2018 IPR025603 YebF/Colicin-M immunity protein YpsIP31758_2347 52cc7bdcae57e6ebc7331528e8bdfd22 136 Hamap MF_01435 Protein YebF [yebF]. 1 117 38.535 T 12-10-2018 IPR020236 Uncharacterised protein family YebF YpsIP31758_2347 52cc7bdcae57e6ebc7331528e8bdfd22 136 Gene3D G3DSA:3.10.450.300 21 122 9.2E-39 T 12-10-2018 IPR038703 YebF/Cmi superfamily YpsIP31758_3044 93791331392dfcc213080c32bc7a21c8 380 Gene3D G3DSA:3.40.50.2000 217 380 5.5E-7 T 12-10-2018 YpsIP31758_3044 93791331392dfcc213080c32bc7a21c8 380 SUPERFAMILY SSF53756 5 343 1.57E-8 T 12-10-2018 YpsIP31758_3044 93791331392dfcc213080c32bc7a21c8 380 Pfam PF13692 Glycosyl transferases group 1 238 369 1.7E-10 T 12-10-2018 YpsIP31758_3836 8f293858e06a2914bfd0dd76561ef50d 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 4.9E-34 T 12-10-2018 IPR007436 Protein of unknown function DUF485 YpsIP31758_1101 a6775f88d4835f7d8a90dc4ff8a02fab 142 SUPERFAMILY SSF103481 41 141 2.48E-14 T 12-10-2018 YpsIP31758_1101 a6775f88d4835f7d8a90dc4ff8a02fab 142 Pfam PF00892 EamA-like transporter family 4 140 2.7E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 SUPERFAMILY SSF55144 13 183 2.62E-44 T 12-10-2018 IPR009097 Cyclic phosphodiesterase YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 181 21.543 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 Gene3D G3DSA:3.90.1140.10 8 182 2.6E-49 T 12-10-2018 YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 Pfam PF02834 LigT like Phosphoesterase 19 96 2.6E-12 T 12-10-2018 IPR014051 Phosphoesterase, HXTX YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 Pfam PF02834 LigT like Phosphoesterase 100 173 1.5E-6 T 12-10-2018 IPR014051 Phosphoesterase, HXTX YpsIP31758_3336 fcccbde9c3567efff5dd3b43e7b883cf 191 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 181 5.3E-37 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YpsIP31758_0661 9905a8bc76af040bc80253c8c029e0cc 288 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site YpsIP31758_0661 9905a8bc76af040bc80253c8c029e0cc 288 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 236 4.2E-12 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YpsIP31758_0661 9905a8bc76af040bc80253c8c029e0cc 288 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.1E-113 T 12-10-2018 IPR022522 Flagellar motor stator, MotA YpsIP31758_1421 8cf783548f0e6631195270410c351170 220 Pfam PF09335 SNARE associated Golgi protein 49 177 6.2E-27 T 12-10-2018 IPR032816 SNARE associated Golgi protein YpsIP31758_2442 a6f61885a911820fb8ac0d753998997b 346 Gene3D G3DSA:1.10.3470.10 11 340 7.9E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_2442 a6f61885a911820fb8ac0d753998997b 346 Pfam PF01032 FecCD transport family 23 334 1.6E-77 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_2442 a6f61885a911820fb8ac0d753998997b 346 SUPERFAMILY SSF81345 6 331 5.23E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_0390 090875b31b9f68ca704d3d79328ba8dc 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-39 T 12-10-2018 IPR010398 Protein of unknown function DUF997 YpsIP31758_0390 090875b31b9f68ca704d3d79328ba8dc 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 5.8E-30 T 12-10-2018 IPR010398 Protein of unknown function DUF997 YpsIP31758_0789 116822c1d40b8d7c2bcb90dde62d853e 138 Pfam PF14485 Domain of unknown function (DUF4431) 87 134 1.6E-19 T 12-10-2018 IPR027826 Domain of unknown function DUF4431 YpsIP31758_3795 77a9afe418efb35ceecb3687b44115ef 162 SUPERFAMILY SSF46785 9 86 3.97E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3795 77a9afe418efb35ceecb3687b44115ef 162 PIRSF PIRSF030837 1 161 2.6E-87 T 12-10-2018 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YpsIP31758_1323 55d4aff7af36db8a0716767dd0d44864 115 Pfam PF14282 FlxA-like protein 13 107 1.0E-23 T 12-10-2018 IPR025577 FlxA-like protein YpsIP31758_3165 7a614f4d224b88413122774aa74336d2 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 6.5E-195 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 YpsIP31758_3165 7a614f4d224b88413122774aa74336d2 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.684 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 YpsIP31758_3165 7a614f4d224b88413122774aa74336d2 413 PIRSF PIRSF016055 1 413 2.9E-198 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 YpsIP31758_3165 7a614f4d224b88413122774aa74336d2 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 4.4E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 YpsIP31758_3854 81e2c120b21722956ddada0ec60db555 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.934 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_3854 81e2c120b21722956ddada0ec60db555 215 Gene3D G3DSA:3.20.20.70 7 209 1.5E-60 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3854 81e2c120b21722956ddada0ec60db555 215 SUPERFAMILY SSF51391 8 207 4.05E-63 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_3854 81e2c120b21722956ddada0ec60db555 215 Pfam PF02581 Thiamine monophosphate synthase 21 189 7.4E-55 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_3854 81e2c120b21722956ddada0ec60db555 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 22 202 2.5E-56 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_2181 40089f009c491763e1646387a9efa849 96 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 12 90 1.9E-24 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system YpsIP31758_3025 4a71d9f513d09238ebd59cd46707c02e 149 SUPERFAMILY SSF141322 90 147 2.88E-5 T 12-10-2018 YpsIP31758_3025 4a71d9f513d09238ebd59cd46707c02e 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 4.5E-24 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain YpsIP31758_3025 4a71d9f513d09238ebd59cd46707c02e 149 Gene3D G3DSA:2.40.50.140 82 149 4.3E-10 T 12-10-2018 YpsIP31758_1240 d7e5a1d2e190f9ce49c933473ed3d50a 354 Pfam PF01594 AI-2E family transporter 19 345 1.4E-81 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like YpsIP31758_0901 8ff71168119e822109b3622b976ebdba 255 Pfam PF11340 Protein of unknown function (DUF3142) 97 188 6.6E-15 T 12-10-2018 IPR021488 Protein of unknown function DUF3142 YpsIP31758_0147 20f71592d740fcfec8aa1e57053d6745 318 Gene3D G3DSA:3.40.50.2300 128 269 5.4E-109 T 12-10-2018 YpsIP31758_0147 20f71592d740fcfec8aa1e57053d6745 318 Gene3D G3DSA:3.40.50.2300 27 287 5.4E-109 T 12-10-2018 YpsIP31758_0147 20f71592d740fcfec8aa1e57053d6745 318 Pfam PF13407 Periplasmic binding protein domain 28 275 3.4E-45 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_0147 20f71592d740fcfec8aa1e57053d6745 318 SUPERFAMILY SSF53822 23 309 1.85E-72 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_2491 9be9f9f8ee03d27a14dca15f57ae1801 371 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 169 369 5.7E-82 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_2491 9be9f9f8ee03d27a14dca15f57ae1801 371 Pfam PF05488 PAAR motif 9 64 9.9E-8 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_2491 9be9f9f8ee03d27a14dca15f57ae1801 371 Pfam PF11692 Protein of unknown function (DUF3289) 123 170 1.5E-15 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_2491 9be9f9f8ee03d27a14dca15f57ae1801 371 Pfam PF11692 Protein of unknown function (DUF3289) 169 369 1.4E-80 T 12-10-2018 IPR017483 Conserved hypothetical protein CHP03034 YpsIP31758_2495 a93b0ce56efb6e62669cfe5c376a36b5 1140 Pfam PF06744 Type VI secretion protein IcmF C-terminal 868 1066 1.9E-56 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal YpsIP31758_2495 a93b0ce56efb6e62669cfe5c376a36b5 1140 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 735 5.7E-71 T 12-10-2018 IPR009612 ImcF-related YpsIP31758_B0020 158fe2054fc44092e855ab7fd3ac465b 318 Pfam PF00437 Type II/IV secretion system protein 108 256 3.4E-20 T 12-10-2018 IPR001482 Type II/IV secretion system protein YpsIP31758_B0020 158fe2054fc44092e855ab7fd3ac465b 318 Gene3D G3DSA:3.40.50.300 93 316 2.7E-41 T 12-10-2018 YpsIP31758_B0020 158fe2054fc44092e855ab7fd3ac465b 318 SUPERFAMILY SSF52540 86 303 1.13E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YpsIP31758_1357 85b58ef557163989bca6bb7d276eaefc 445 SUPERFAMILY SSF53448 88 255 1.55E-10 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YpsIP31758_1357 85b58ef557163989bca6bb7d276eaefc 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 71 315 3.3E-59 T 12-10-2018 IPR021067 Glycosyltransferase, GlcNAc YpsIP31758_1357 85b58ef557163989bca6bb7d276eaefc 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 6 47 5.1E-9 T 12-10-2018 IPR021067 Glycosyltransferase, GlcNAc YpsIP31758_2184 fd8b8aab9509e7a95b7bf4cd36ac734b 99 SUPERFAMILY SSF160719 16 81 9.55E-25 T 12-10-2018 YpsIP31758_2184 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Gene3D G3DSA:3.10.450.40 6 95 4.6E-18 T 12-10-2018 YpsIP31758_2184 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Pfam PF04965 Gene 25-like lysozyme 20 81 1.6E-13 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_B0071 1a234cd73f0db07b8b2f439119e4cdfc 485 Pfam PF11740 Plasmid replication region DNA-binding N-term 151 256 1.5E-10 T 12-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain YpsIP31758_0745 c18b0109608232237b927e8c05e1b148 107 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 100 3.5E-22 T 12-10-2018 IPR009241 Toxin HigB-like YpsIP31758_1573 02d5baf5e72a1fe7e555f99265275a0d 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 1.2E-15 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YpsIP31758_1505 cc07d79182b3e8b2d220de381ad2fbb2 220 Pfam PF16809 NleF caspase inhibitor 37 176 1.2E-24 T 12-10-2018 IPR031829 Effector protein NleF YpsIP31758_1505 cc07d79182b3e8b2d220de381ad2fbb2 220 Gene3D G3DSA:1.20.1260.90 27 186 2.5E-10 T 12-10-2018 IPR038334 NleF superfamily YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 2.5E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 2.5E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 2.5E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 2 88 1.2E-27 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 Pfam PF01313 Bacterial export proteins, family 3 9 78 5.1E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_0625 91591a4ae9908e95e733f8fdf7e1c070 90 PIRSF PIRSF004669 2 90 6.4E-31 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YpsIP31758_3522 2940bffdd58b27bc9e9086eb64afda9a 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 301 2.7E-45 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0534 74b13e0a76e45a95c466bdf67d571ade 633 Pfam PF04632 Fusaric acid resistance protein family 261 524 5.7E-25 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 YpsIP31758_0697 8f73e3c191e6f7c19c71a1021b6dffe7 439 SUPERFAMILY SSF48452 260 407 4.11E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_0697 8f73e3c191e6f7c19c71a1021b6dffe7 439 Gene3D G3DSA:1.25.40.10 233 418 1.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_4129 ce2328ad4d168fe5ea8d309547832428 239 Pfam PF11254 Protein of unknown function (DUF3053) 18 234 4.0E-94 T 12-10-2018 IPR021413 Protein of unknown function DUF3053 YpsIP31758_1993 885f186bf0a4e8e7d94cbd7cec625d53 372 SUPERFAMILY SSF103481 206 296 5.49E-6 T 12-10-2018 YpsIP31758_1993 885f186bf0a4e8e7d94cbd7cec625d53 372 SUPERFAMILY SSF103481 58 147 4.18E-11 T 12-10-2018 YpsIP31758_1993 885f186bf0a4e8e7d94cbd7cec625d53 372 Pfam PF00892 EamA-like transporter family 10 144 3.6E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1993 885f186bf0a4e8e7d94cbd7cec625d53 372 Pfam PF00892 EamA-like transporter family 163 291 8.9E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_2189 f25523bb3c7bace78b294660e83f941b 115 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 25 103 2.4E-10 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative YpsIP31758_3125 14c5580ca88c2a0a242419ef35cb98bb 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 58.026 T 12-10-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YpsIP31758_3125 14c5580ca88c2a0a242419ef35cb98bb 193 PIRSF PIRSF011489 1 193 2.5E-78 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YpsIP31758_3125 14c5580ca88c2a0a242419ef35cb98bb 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 186 5.0E-31 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YpsIP31758_3789 9f2622b870dec9254c7049fb5791784f 197 Pfam PF02342 TerD domain 2 185 5.1E-47 T 12-10-2018 IPR003325 TerD domain YpsIP31758_3789 9f2622b870dec9254c7049fb5791784f 197 Gene3D G3DSA:2.60.60.30 18 185 1.7E-48 T 12-10-2018 YpsIP31758_1623 f1e451617d5ddd841bf8ac2dc4d5acb3 67 Pfam PF14001 YdfZ protein 3 66 8.3E-34 T 12-10-2018 IPR017704 Putative selenium-binding protein YdfZ YpsIP31758_1623 f1e451617d5ddd841bf8ac2dc4d5acb3 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 2 66 1.1E-36 T 12-10-2018 IPR017704 Putative selenium-binding protein YdfZ YpsIP31758_0593 63f808134a28e87af00b6f56c17459b4 518 SUPERFAMILY SSF53300 160 498 3.88E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YpsIP31758_1407 eac5bc96c2d4f2997a6e5ccd095d02cd 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 7.0E-45 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 YpsIP31758_3327 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 92 161 1.2E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 YpsIP31758_3327 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 4 78 1.3E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 YpsIP31758_1336 03477ab5579b837456de755e493fca14 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 3 83 2.3E-46 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 Gene3D G3DSA:3.80.10.10 30 317 1.8E-60 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SUPERFAMILY SSF52058 65 300 4.08E-32 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 1.8E-18 T 12-10-2018 IPR032674 LRR-containing bacterial E3 ligase, N-terminal MetaCyc: PWY-7511 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 232 251 1.4 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 128 147 0.0097 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 190 209 3.7E-4 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 107 126 3.9 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 211 230 1.0 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 253 272 7.0 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 170 189 0.77 T 12-10-2018 YpsIP31758_0675 bb203df92edb2d45938943de0c90ed10 318 SMART SM00364 84 106 14.0 T 12-10-2018 YpsIP31758_1792 edb11f99935fcc9dab09632702c036ed 152 Pfam PF08808 RES domain 2 147 1.4E-24 T 12-10-2018 IPR014914 RES domain YpsIP31758_1792 edb11f99935fcc9dab09632702c036ed 152 SMART SM00953 15 140 7.6E-34 T 12-10-2018 IPR014914 RES domain YpsIP31758_2486 93dfabd59c9309ae1cd9af84bad362c7 150 SUPERFAMILY SSF160719 33 120 8.11E-17 T 12-10-2018 YpsIP31758_2486 93dfabd59c9309ae1cd9af84bad362c7 150 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 6.8E-24 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein YpsIP31758_2486 93dfabd59c9309ae1cd9af84bad362c7 150 Pfam PF04965 Gene 25-like lysozyme 35 116 3.1E-9 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_2485 978c5550809534870e707a8de6327daa 455 Pfam PF06812 ImpA, N-terminal, type VI secretion system 5 112 4.2E-20 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_2485 978c5550809534870e707a8de6327daa 455 Pfam PF12486 Type VI secretion system, EvfB, or VasL 304 448 3.1E-50 T 12-10-2018 IPR021069 ImpA, C-terminal YpsIP31758_B0111 745f1589d13e1b7e7bbb6624d1a9ec19 282 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 47 258 3.6E-56 T 12-10-2018 IPR031618 Putative type IV secretory system protein YpsIP31758_0909 506b3f3e963827717419ce107a5c1308 333 SUPERFAMILY SSF53822 27 330 1.78E-65 T 12-10-2018 IPR028082 Periplasmic binding protein-like I YpsIP31758_0909 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 131 267 5.6E-65 T 12-10-2018 YpsIP31758_0909 506b3f3e963827717419ce107a5c1308 333 Pfam PF13407 Periplasmic binding protein domain 29 287 6.9E-44 T 12-10-2018 IPR025997 Periplasmic binding protein YpsIP31758_0909 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 28 294 5.6E-65 T 12-10-2018 YpsIP31758_3353 d78ad99971c4ede6f7eea960215e33e4 115 Gene3D G3DSA:1.20.58.1630 23 114 3.6E-10 T 12-10-2018 IPR038432 PulS/OutS-like superfamily YpsIP31758_3353 d78ad99971c4ede6f7eea960215e33e4 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 35 113 2.0E-42 T 12-10-2018 YpsIP31758_3353 d78ad99971c4ede6f7eea960215e33e4 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 3.2E-9 T 12-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like YpsIP31758_2446 fd736c5cb75bfe75c198444dcd7786ba 192 Gene3D G3DSA:3.40.630.30 3 183 4.8E-48 T 12-10-2018 YpsIP31758_2446 fd736c5cb75bfe75c198444dcd7786ba 192 Pfam PF13523 Acetyltransferase (GNAT) domain 26 167 8.5E-45 T 12-10-2018 YpsIP31758_2446 fd736c5cb75bfe75c198444dcd7786ba 192 SMART SM01006 21 70 1.1E-9 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain YpsIP31758_2446 fd736c5cb75bfe75c198444dcd7786ba 192 SUPERFAMILY SSF55729 15 181 3.65E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase YpsIP31758_3716 b2265dc3be438abd1b9f11cf1fa62f50 412 Pfam PF13289 SIR2-like domain 163 340 1.6E-13 T 12-10-2018 IPR039444 SIR2-like domain YpsIP31758_1371 d403c294ac943a8c9af4f669877573e1 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 3.3E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_1371 d403c294ac943a8c9af4f669877573e1 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 2.6E-140 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 YpsIP31758_1395 462ed41b472156dd4840df3c59bb2667 408 SUPERFAMILY SSF48452 162 268 5.52E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1395 462ed41b472156dd4840df3c59bb2667 408 Gene3D G3DSA:1.25.40.10 152 293 1.2E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YpsIP31758_1395 462ed41b472156dd4840df3c59bb2667 408 Pfam PF14559 Tetratricopeptide repeat 175 242 3.4E-11 T 12-10-2018 YpsIP31758_1395 462ed41b472156dd4840df3c59bb2667 408 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 112 8.2E-31 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI YpsIP31758_1852 3e7fff824804225c9273250dc854ef09 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 341 1.9E-48 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0268 5088932c80a3829aed4d192a880f0555 603 Pfam PF02554 Carbon starvation protein CstA 4 367 1.2E-137 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YpsIP31758_0268 5088932c80a3829aed4d192a880f0555 603 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 417 538 1.5E-27 T 12-10-2018 IPR025299 CstA, C-terminal domain YpsIP31758_0917 10991cb2299d93454a516d4d71ccb570 400 Pfam PF07745 Glycosyl hydrolase family 53 40 399 9.3E-123 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 YpsIP31758_0917 10991cb2299d93454a516d4d71ccb570 400 Gene3D G3DSA:3.20.20.80 20 400 3.0E-146 T 12-10-2018 YpsIP31758_0917 10991cb2299d93454a516d4d71ccb570 400 SUPERFAMILY SSF51445 14 399 4.15E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0518 8a992d20f9b011145410d6ca2eefd684 220 Gene3D G3DSA:3.40.1350.110 71 220 1.4E-59 T 12-10-2018 YpsIP31758_3235 5a22e148cb1017a56fd3e53400828800 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 2.0E-4 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 YpsIP31758_2154 21c1769b82c2152eafad7ba18dfeb100 157 Gene3D G3DSA:2.60.40.10 29 103 3.8E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold YpsIP31758_2154 21c1769b82c2152eafad7ba18dfeb100 157 SUPERFAMILY SSF49478 39 88 4.71E-7 T 12-10-2018 YpsIP31758_3072 5b8872371b181aea2a9a0dd8083c0c1b 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 2.5E-64 T 12-10-2018 IPR019693 Biofilm formation regulator YbaJ YpsIP31758_0566 7cd90199f27aa7edd031f861de2aac35 93 Pfam PF04380 Membrane fusogenic activity 1 78 2.9E-28 T 12-10-2018 IPR007475 Membrane fusogenic activity YpsIP31758_3580 c5baf972695e1346e599d62f15eb46e6 173 PIRSF PIRSF025550 1 173 1.1E-82 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YpsIP31758_3580 c5baf972695e1346e599d62f15eb46e6 173 SUPERFAMILY SSF55718 42 137 1.79E-23 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily YpsIP31758_3580 c5baf972695e1346e599d62f15eb46e6 173 Gene3D G3DSA:3.30.1050.10 39 139 6.2E-10 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily YpsIP31758_3580 c5baf972695e1346e599d62f15eb46e6 173 Pfam PF02036 SCP-2 sterol transfer family 46 133 1.8E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain YpsIP31758_2301 e0bf0abec7d2c8d1ecbf662713ab35bf 178 Pfam PF04347 Flagellar biosynthesis protein, FliO 82 172 1.2E-21 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YpsIP31758_2301 e0bf0abec7d2c8d1ecbf662713ab35bf 178 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 70 138 1.6E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YpsIP31758_1084 eefedb984ac08908c1f29b39d482e236 330 PIRSF PIRSF016502 7 330 4.3E-104 T 12-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 YpsIP31758_1084 eefedb984ac08908c1f29b39d482e236 330 Gene3D G3DSA:1.10.3430.10 8 330 5.0E-100 T 12-10-2018 IPR029020 Ammonium/urea transporter YpsIP31758_1084 eefedb984ac08908c1f29b39d482e236 330 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 319 7.9E-117 T 12-10-2018 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 YpsIP31758_1084 eefedb984ac08908c1f29b39d482e236 330 Pfam PF03253 Urea transporter 24 320 4.5E-94 T 12-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 YpsIP31758_0951 2170d9d6295084b351d8be90c0133060 138 SUPERFAMILY SSF46894 43 118 9.35E-6 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YpsIP31758_0951 2170d9d6295084b351d8be90c0133060 138 Gene3D G3DSA:1.10.10.10 27 121 9.0E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_0659 9afa045010ae9537c0dbbe29a65b7eb2 156 Pfam PF03748 Flagellar basal body-associated protein FliL 57 156 1.3E-10 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YpsIP31758_4144 2eab9c02246fb83367cd662adf15bd39 112 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 2.0E-15 T 12-10-2018 IPR010780 Protein of unknown function DUF1375 YpsIP31758_1682 fd9499ca5e97c9d63c368a7149081a48 388 Pfam PF14583 Oligogalacturonate lyase 1 386 6.8E-260 T 12-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 YpsIP31758_1682 fd9499ca5e97c9d63c368a7149081a48 388 SUPERFAMILY SSF82171 15 382 3.4E-30 T 12-10-2018 YpsIP31758_1682 fd9499ca5e97c9d63c368a7149081a48 388 Gene3D G3DSA:2.130.10.10 1 388 2.4E-168 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YpsIP31758_0151 8dea072c2c76b963285744c559e087f8 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 4.1E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_2199 221a0fb9742110b9495012e5f3556dcd 214 Pfam PF11041 Protein of unknown function (DUF2612) 10 186 1.5E-47 T 12-10-2018 IPR021283 Protein of unknown function DUF2612 YpsIP31758_1163 5d49eef17c0ea6c35b1ccf5da52db72f 224 PIRSF PIRSF008159 7 224 3.1E-76 T 12-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, YpsIP31758_1163 5d49eef17c0ea6c35b1ccf5da52db72f 224 Pfam PF06226 Protein of unknown function (DUF1007) 22 223 4.5E-64 T 12-10-2018 IPR010412 Protein of unknown function DUF1007 YpsIP31758_1225 8c0567aeaf52f99739b6302e58cf5205 70 Pfam PF11119 Protein of unknown function (DUF2633) 9 64 3.8E-32 T 12-10-2018 IPR022576 Protein of unknown function DUF2633 YpsIP31758_1225 8c0567aeaf52f99739b6302e58cf5205 70 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 10 57 6.0E-20 T 12-10-2018 IPR022576 Protein of unknown function DUF2633 YpsIP31758_0160 6625c1a4c81d0ea2454514e38e85f337 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 9.1E-64 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_0046 e91aad59083720fc641f6bb9d9d38247 200 Pfam PF03592 Terminase small subunit 14 167 5.2E-17 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 YpsIP31758_2876 082cb72adc2e2ac294aac9c2a69a8cd7 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 5.5E-173 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 YpsIP31758_2876 082cb72adc2e2ac294aac9c2a69a8cd7 522 PIRSF PIRSF006446 1 521 9.4E-142 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 YpsIP31758_4029 94c95df70ff360754f356b9434e8792c 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 6.7E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0729 02e7b1a17a70983c0a5d40c58d30f4e6 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 7.3E-48 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0729 02e7b1a17a70983c0a5d40c58d30f4e6 228 Pfam PF09850 Type VI secretion system protein DotU 14 215 9.5E-46 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU YpsIP31758_0729 02e7b1a17a70983c0a5d40c58d30f4e6 228 Gene3D G3DSA:1.25.40.590 7 188 6.7E-49 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily YpsIP31758_0758 32cef965d4d83c7bb46467feff676f4d 233 Pfam PF13280 WYL domain 127 195 7.4E-7 T 12-10-2018 IPR026881 WYL domain YpsIP31758_0758 32cef965d4d83c7bb46467feff676f4d 233 ProSitePatterns PS00894 DeoR-type HTH domain signature. 14 48 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YpsIP31758_0758 32cef965d4d83c7bb46467feff676f4d 233 Pfam PF08220 DeoR-like helix-turn-helix domain 14 50 2.3E-4 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YpsIP31758_1355 2ac4cf7361c48d4c464692dd00c9bb88 560 PRINTS PR01021 OMPA domain signature 474 489 1.3E-5 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_1355 2ac4cf7361c48d4c464692dd00c9bb88 560 PRINTS PR01021 OMPA domain signature 489 505 1.3E-5 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YpsIP31758_1355 2ac4cf7361c48d4c464692dd00c9bb88 560 Pfam PF00691 OmpA family 441 539 1.7E-17 T 12-10-2018 IPR006665 OmpA-like domain YpsIP31758_1355 2ac4cf7361c48d4c464692dd00c9bb88 560 Gene3D G3DSA:3.30.1330.60 411 554 8.7E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_1355 2ac4cf7361c48d4c464692dd00c9bb88 560 SUPERFAMILY SSF103088 440 547 1.7E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily YpsIP31758_0327 5ee9e6f36ad899e09767ad10180931e8 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 113 9.1E-23 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_0327 5ee9e6f36ad899e09767ad10180931e8 437 Pfam PF12486 Type VI secretion system, EvfB, or VasL 284 430 8.1E-55 T 12-10-2018 IPR021069 ImpA, C-terminal YpsIP31758_0545 52bd9ce5c355a7463a7a680120343519 200 Gene3D G3DSA:1.10.472.60 37 165 1.2E-56 T 12-10-2018 YpsIP31758_0545 52bd9ce5c355a7463a7a680120343519 200 SUPERFAMILY SSF52833 1 198 1.38E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily YpsIP31758_0545 52bd9ce5c355a7463a7a680120343519 200 Gene3D G3DSA:3.40.30.10 2 192 1.2E-56 T 12-10-2018 YpsIP31758_1809 b6d63343e28a65475ce3cc71c67428aa 910 Pfam PF11739 Dicarboxylate transport 661 862 9.0E-66 T 12-10-2018 IPR021730 Dicarboxylate transport YpsIP31758_0514 7d75c91a9a3993a451907c780dc86910 1268 Pfam PF13332 Haemagluttinin repeat 143 196 0.0035 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0514 7d75c91a9a3993a451907c780dc86910 1268 Pfam PF13332 Haemagluttinin repeat 290 391 1.6E-7 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0514 7d75c91a9a3993a451907c780dc86910 1268 Pfam PF13332 Haemagluttinin repeat 437 607 4.7E-41 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0514 7d75c91a9a3993a451907c780dc86910 1268 Pfam PF13332 Haemagluttinin repeat 57 135 0.01 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_0514 7d75c91a9a3993a451907c780dc86910 1268 Pfam PF04829 Pre-toxin domain with VENN motif 961 1010 2.6E-20 T 12-10-2018 IPR006914 VENN motif-containing domain YpsIP31758_2185 942c349b01f2775396fc12967fb5ef32 95 Gene3D G3DSA:2.60.40.3940 10 93 2.0E-6 T 12-10-2018 YpsIP31758_3220 2ddb4b5211605589b3fb85d125120c4a 358 SUPERFAMILY SSF51569 11 346 9.16E-136 T 12-10-2018 YpsIP31758_3220 2ddb4b5211605589b3fb85d125120c4a 358 PIRSF PIRSF001361 1 356 2.5E-163 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_3220 2ddb4b5211605589b3fb85d125120c4a 358 Pfam PF00793 DAHP synthetase I family 41 342 3.5E-107 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YpsIP31758_3220 2ddb4b5211605589b3fb85d125120c4a 358 Gene3D G3DSA:3.20.20.70 4 352 1.0E-155 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YpsIP31758_3220 2ddb4b5211605589b3fb85d125120c4a 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 349 1.6E-167 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YpsIP31758_0542 caac41720924bff78f3d16793b6d2d7b 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 8.0E-50 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 YpsIP31758_0542 caac41720924bff78f3d16793b6d2d7b 126 SUPERFAMILY SSF55298 2 125 2.51E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0542 caac41720924bff78f3d16793b6d2d7b 126 Gene3D G3DSA:3.30.1330.40 1 126 9.2E-50 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YpsIP31758_0542 caac41720924bff78f3d16793b6d2d7b 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 YpsIP31758_0542 caac41720924bff78f3d16793b6d2d7b 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 3.0E-44 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 YpsIP31758_4099 47a45151ba7d080ca86b78255cc28f6a 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 1.0E-48 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0962 bd4ede3afb57523dfc597d98a4b83b75 121 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 18 117 8.7E-20 T 12-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like YpsIP31758_0962 bd4ede3afb57523dfc597d98a4b83b75 121 Gene3D G3DSA:1.20.58.1630 28 121 1.1E-26 T 12-10-2018 IPR038432 PulS/OutS-like superfamily YpsIP31758_0674 95abe053406fb7d30901dd14957d6eca 47 Gene3D G3DSA:1.20.58.90 1 40 3.8E-11 T 12-10-2018 YpsIP31758_B0093 b8341801b3d2aa33fe7afac84cc59b01 385 SUPERFAMILY SSF109709 147 226 3.01E-10 T 12-10-2018 YpsIP31758_B0021 9f3316e269699f0df08396f5a80df0cd 428 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 314 371 2.2E-16 T 12-10-2018 IPR007001 Bacterial shufflon protein, N-terminal YpsIP31758_B0021 9f3316e269699f0df08396f5a80df0cd 428 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 45 318 8.8E-49 T 12-10-2018 IPR007001 Bacterial shufflon protein, N-terminal YpsIP31758_0149 33449a0730a215eadbd6b53e45ed73aa 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 315 1.1E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0055 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.6E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 YpsIP31758_0055 d432d1fea33d6e4e5300c080fb7696a1 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.9E-130 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 YpsIP31758_0055 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 7.5E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal YpsIP31758_1396 d2e52256087bdf789a86516fe165474c 254 Pfam PF04333 MlaA lipoprotein 31 224 1.0E-65 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 YpsIP31758_1396 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 9.7E-33 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 YpsIP31758_1396 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 9.7E-33 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 YpsIP31758_1396 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 9.7E-33 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 YpsIP31758_1396 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 9.7E-33 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 YpsIP31758_2742 808fd45c1839cb5c8466f73a7837b459 64 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 42 1.0E-18 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 YpsIP31758_2742 808fd45c1839cb5c8466f73a7837b459 64 Pfam PF10948 Protein of unknown function (DUF2635) 3 46 1.0E-21 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 YpsIP31758_1266 db42b06b84c28839747feb4283f5e185 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 168 7.7E-34 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YpsIP31758_0678 9cc574b57fada46a23d45524560186a0 518 Pfam PF03806 AbgT putative transporter family 14 514 2.6E-159 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 YpsIP31758_0986 ddf05959f512286a2292091749c92632 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 39 0.0013 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_0986 ddf05959f512286a2292091749c92632 202 PIRSF PIRSF004525 6 202 2.5E-75 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted YpsIP31758_0986 ddf05959f512286a2292091749c92632 202 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site YpsIP31758_A0056 e65057535c2b796fc6035347453279b6 473 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 83 287 8.7E-31 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 YpsIP31758_A0056 e65057535c2b796fc6035347453279b6 473 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 46 347 3.7E-81 T 12-10-2018 IPR014150 Conjugal transfer, TrbL YpsIP31758_1425 1ad16b1a4c89ff512c3f156bd7f258ab 169 Pfam PF02674 Colicin V production protein 4 142 3.0E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 YpsIP31758_0521 1d59b0b7e8dd3c560eab1c6698655986 412 Pfam PF13332 Haemagluttinin repeat 1 107 7.7E-27 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_A0053 6398db27f522b10284a403967f58f0d7 149 Pfam PF07283 Conjugal transfer protein TrbH 34 149 1.8E-40 T 12-10-2018 IPR010837 Conjugal transfer, TrbH YpsIP31758_2674 1357e66646a8d61bec2c17d2d1dd6937 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 21 358 9.7E-127 T 12-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 YpsIP31758_2674 1357e66646a8d61bec2c17d2d1dd6937 362 Pfam PF03601 Conserved hypothetical protein 698 23 338 1.4E-107 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YpsIP31758_2859 d84860f3f9cc43f1654f00386800ad67 111 Pfam PF07769 psiF repeat 33 65 4.4E-17 T 12-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat YpsIP31758_2859 d84860f3f9cc43f1654f00386800ad67 111 Pfam PF07769 psiF repeat 76 108 8.8E-19 T 12-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat YpsIP31758_0452 04ef9042f43a0fee95eb20210ee798f3 100 Gene3D G3DSA:3.30.750.24 12 100 3.5E-12 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_0452 04ef9042f43a0fee95eb20210ee798f3 100 Pfam PF13466 STAS domain 14 91 8.8E-19 T 12-10-2018 IPR002645 STAS domain YpsIP31758_0452 04ef9042f43a0fee95eb20210ee798f3 100 SUPERFAMILY SSF52091 13 96 1.04E-16 T 12-10-2018 IPR036513 STAS domain superfamily YpsIP31758_4093 e66190356a9f51d7cc237d84389e055f 335 Gene3D G3DSA:1.10.3470.10 18 334 1.1E-42 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_4093 e66190356a9f51d7cc237d84389e055f 335 SUPERFAMILY SSF81345 26 331 1.57E-43 T 12-10-2018 IPR037294 ABC transporter, BtuC-like YpsIP31758_4093 e66190356a9f51d7cc237d84389e055f 335 Pfam PF01032 FecCD transport family 49 331 2.0E-42 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YpsIP31758_3357 7d9445a2871152de4722446fce44b597 295 SUPERFAMILY SSF103481 45 139 4.32E-7 T 12-10-2018 YpsIP31758_3357 7d9445a2871152de4722446fce44b597 295 Pfam PF00892 EamA-like transporter family 157 284 5.3E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_3357 7d9445a2871152de4722446fce44b597 295 SUPERFAMILY SSF103481 188 289 2.03E-12 T 12-10-2018 YpsIP31758_2735 8a07dea23a2542567c39b7448c57f846 198 Pfam PF06890 Bacteriophage Mu Gp45 protein 21 176 8.3E-45 T 12-10-2018 IPR014462 Phage-associated protein Gp45 YpsIP31758_2735 8a07dea23a2542567c39b7448c57f846 198 PIRSF PIRSF012337 1 196 1.2E-62 T 12-10-2018 IPR014462 Phage-associated protein Gp45 YpsIP31758_3784 0ba3ff80eca81522192704ff8236b9ed 191 Pfam PF02342 TerD domain 1 187 1.1E-84 T 12-10-2018 IPR003325 TerD domain YpsIP31758_3784 0ba3ff80eca81522192704ff8236b9ed 191 Gene3D G3DSA:2.60.60.30 20 186 6.0E-75 T 12-10-2018 YpsIP31758_0426 ccea71181273b71288603d57e04d67b4 446 Gene3D G3DSA:3.30.2290.10 7 232 5.2E-94 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal YpsIP31758_0426 ccea71181273b71288603d57e04d67b4 446 SUPERFAMILY SSF111283 13 446 1.44E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 YpsIP31758_0426 ccea71181273b71288603d57e04d67b4 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.2E-59 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 YpsIP31758_2828 471b00863f00c0dee8a2f3a47c78c23b 682 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 12-10-2018 IPR018093 BCCT transporter, conserved site YpsIP31758_2828 471b00863f00c0dee8a2f3a47c78c23b 682 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 1.3E-175 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 YpsIP31758_2828 471b00863f00c0dee8a2f3a47c78c23b 682 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 2.6E-175 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 YpsIP31758_3829 e07b4620325426d498162cdc13c644b9 404 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 397 9.9E-17 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain YpsIP31758_3829 e07b4620325426d498162cdc13c644b9 404 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 402 2.0E-121 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ YpsIP31758_B0115 6ca4b4381ed28472d7b9d098b1be4bb6 361 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 108 347 3.2E-54 T 12-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion YpsIP31758_1132 5c419e7d4e08e8222bd29d77452500e6 151 PIRSF PIRSF004923 1 150 8.8E-38 T 12-10-2018 IPR026268 Protein RseC YpsIP31758_1132 5c419e7d4e08e8222bd29d77452500e6 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 140 4.1E-35 T 12-10-2018 YpsIP31758_0939 35aba4e7588578febe16caa8a0f2949b 262 Pfam PF03609 PTS system sorbose-specific iic component 3 233 5.8E-69 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 YpsIP31758_B0014 8e4e3660ab4328edd94bcd3c00777ae4 564 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 61 563 8.9E-154 T 12-10-2018 IPR013359 Pilus formation type IVB, outer membrane PilN YpsIP31758_B0014 8e4e3660ab4328edd94bcd3c00777ae4 564 Pfam PF00263 Bacterial type II and III secretion system protein 396 561 1.3E-16 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 YpsIP31758_B0014 8e4e3660ab4328edd94bcd3c00777ae4 564 Pfam PF07655 Secretin N-terminal domain 215 296 6.4E-11 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 YpsIP31758_0524 d0318f78218a887a250cdb1a5a6c847d 459 Pfam PF10091 Putative glucoamylase 257 410 3.9E-7 T 12-10-2018 IPR019282 Domain of unknown function DUF2329 YpsIP31758_0524 d0318f78218a887a250cdb1a5a6c847d 459 Gene3D G3DSA:1.50.10.140 57 413 2.5E-24 T 12-10-2018 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 PIRSF PIRSF005096 12 354 5.0E-124 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 20 351 3.1E-143 T 12-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 Pfam PF01263 Aldose 1-epimerase 26 350 1.3E-91 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 SUPERFAMILY SSF74650 16 351 6.28E-111 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 YpsIP31758_2858 c7e9ec17e125181ae982404b54ffd15a 356 Gene3D G3DSA:2.70.98.10 16 353 1.1E-120 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 YpsIP31758_3825 f59a9363c77ee2d70457088c23baee9f 82 Pfam PF06287 Protein of unknown function (DUF1039) 17 81 6.0E-30 T 12-10-2018 IPR010437 Type III secretion system SsaH YpsIP31758_3825 f59a9363c77ee2d70457088c23baee9f 82 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 4 82 4.5E-37 T 12-10-2018 IPR010437 Type III secretion system SsaH YpsIP31758_1744 f23870063ea6713c8c3650945ed547d7 441 SUPERFAMILY SSF101960 48 436 5.23E-111 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YpsIP31758_1744 f23870063ea6713c8c3650945ed547d7 441 Pfam PF01458 Uncharacterized protein family (UPF0051) 188 411 6.8E-74 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YpsIP31758_1744 f23870063ea6713c8c3650945ed547d7 441 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 427 1.7E-88 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 YpsIP31758_0381 0e17da8c38beaa397d044dbc79b3750f 131 Gene3D G3DSA:1.20.1290.10 4 128 2.7E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_0381 0e17da8c38beaa397d044dbc79b3750f 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 118 5.0E-23 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YpsIP31758_0381 0e17da8c38beaa397d044dbc79b3750f 131 SUPERFAMILY SSF69118 2 124 2.88E-34 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YpsIP31758_2696 66d8143eab340328fec0d0ed33a195c4 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 7.9E-5 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein YpsIP31758_1463 2aa43b20da3c7458c4462c4b08fa1675 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.6E-22 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YpsIP31758_1463 2aa43b20da3c7458c4462c4b08fa1675 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.052 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YpsIP31758_1797 263c7d14007c84c2534f4e9b3340f1c6 256 SUPERFAMILY SSF53187 28 244 4.3E-34 T 12-10-2018 YpsIP31758_1797 263c7d14007c84c2534f4e9b3340f1c6 256 Gene3D G3DSA:3.40.630.10 22 256 9.3E-56 T 12-10-2018 YpsIP31758_1797 263c7d14007c84c2534f4e9b3340f1c6 256 Pfam PF00246 Zinc carboxypeptidase 35 178 1.3E-13 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YpsIP31758_1948 a10dfc4ca80ad49c5d74feedd63e3785 81 Pfam PF13453 Transcription factor zinc-finger 3 43 6.1E-20 T 12-10-2018 IPR027392 Transcription factor zinc-finger YpsIP31758_0708 a76f18a132e39e9b0c641ae5355d7922 357 SUPERFAMILY SSF51445 6 334 2.24E-52 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily YpsIP31758_0708 a76f18a132e39e9b0c641ae5355d7922 357 Gene3D G3DSA:3.20.20.80 20 313 1.4E-31 T 12-10-2018 YpsIP31758_0708 a76f18a132e39e9b0c641ae5355d7922 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 30 295 4.9E-12 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 YpsIP31758_1548 4f75005f5f2ac1b3d19897395e2902f4 308 SUPERFAMILY SSF103481 55 159 4.58E-15 T 12-10-2018 YpsIP31758_1548 4f75005f5f2ac1b3d19897395e2902f4 308 Pfam PF00892 EamA-like transporter family 170 303 2.6E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1548 4f75005f5f2ac1b3d19897395e2902f4 308 Pfam PF00892 EamA-like transporter family 20 156 4.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YpsIP31758_1548 4f75005f5f2ac1b3d19897395e2902f4 308 SUPERFAMILY SSF103481 203 303 3.66E-11 T 12-10-2018 YpsIP31758_3986 3a20f28cb95ef93f9fe10c53676daffb 85 Pfam PF09012 FeoC like transcriptional regulator 3 77 1.1E-19 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC YpsIP31758_3986 3a20f28cb95ef93f9fe10c53676daffb 85 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 79 26.24 T 12-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YpsIP31758_3986 3a20f28cb95ef93f9fe10c53676daffb 85 SUPERFAMILY SSF46785 1 75 7.8E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YpsIP31758_3986 3a20f28cb95ef93f9fe10c53676daffb 85 Gene3D G3DSA:1.10.10.10 1 80 3.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YpsIP31758_2613 94bedd623e8dec4ce6004c475cd38af4 315 Pfam PF04393 Protein of unknown function (DUF535) 33 311 1.7E-103 T 12-10-2018 IPR007488 Protein of unknown function DUF535 YpsIP31758_0094 d67835e9290ffd49bd023da7c8602a13 245 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 138 3.9E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 YpsIP31758_0094 d67835e9290ffd49bd023da7c8602a13 245 Gene3D G3DSA:3.40.50.10320 6 245 4.1E-96 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YpsIP31758_0094 d67835e9290ffd49bd023da7c8602a13 245 SUPERFAMILY SSF102588 6 244 1.01E-50 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YpsIP31758_B0001 6fb013bc65f35a0ad169e95c807670e4 439 Pfam PF01051 Initiator Replication protein 87 257 6.0E-8 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 Pfam PF02108 Flagellar assembly protein FliH 106 229 2.3E-39 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 143 165 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 211 236 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 194 210 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 105 124 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 125 142 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 86 104 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 63 85 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_2292 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 166 193 1.5E-73 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YpsIP31758_1893 ecf740b9d862cdfd5fcd28b626a3198c 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 3.5E-45 T 12-10-2018 IPR019690 Protein of unknown function DUF2569 YpsIP31758_2534 4c6b5827ed6b591c5308d3b55b4c565f 226 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 219 1.6E-45 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 YpsIP31758_2534 4c6b5827ed6b591c5308d3b55b4c565f 226 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 222 26.187 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 YpsIP31758_0052 d4976a7fa8c334ed728187ac2643802d 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 64 1.2E-10 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA YpsIP31758_0052 d4976a7fa8c334ed728187ac2643802d 72 SUPERFAMILY SSF46955 17 67 4.21E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily YpsIP31758_3582 c869f32e94e2333fe4129edb7b712a59 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YpsIP31758_3582 c869f32e94e2333fe4129edb7b712a59 331 Pfam PF01136 Peptidase family U32 76 330 9.2E-66 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YpsIP31758_3582 c869f32e94e2333fe4129edb7b712a59 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YpsIP31758_3736 389e27261adca8b2a7b5fd707ef6747c 356 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 56 160 1.3E-43 T 12-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 YpsIP31758_3736 389e27261adca8b2a7b5fd707ef6747c 356 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 269 351 3.0E-20 T 12-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal YpsIP31758_2298 655446394ff80fa2f02100fb9f4bc8d8 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 3.4E-21 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YpsIP31758_A0043 d74046f6af6270d6b1e03a561d58b939 96 SUPERFAMILY SSF47598 8 48 1.26E-8 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YpsIP31758_1069 aebc2c067d0ea0d3e7e16284660eed32 112 Pfam PF04899 MbeD/MobD like 3 61 1.3E-7 T 12-10-2018 IPR006983 MbeD/MobD-like YpsIP31758_0752 0c058bb2f4f3625ea53dabb5b777e622 143 Gene3D G3DSA:1.10.472.120 2 143 9.7E-55 T 12-10-2018 YpsIP31758_0752 0c058bb2f4f3625ea53dabb5b777e622 143 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 50 143 2.0E-30 T 12-10-2018 IPR004914 Antirestriction protein YpsIP31758_0752 0c058bb2f4f3625ea53dabb5b777e622 143 Pfam PF03230 Antirestriction protein 52 143 6.1E-36 T 12-10-2018 IPR004914 Antirestriction protein YpsIP31758_0891 85bb15d4c69a779b008b3515fa1f7b90 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 103 2.5E-8 T 12-10-2018 IPR009241 Toxin HigB-like YpsIP31758_3674 505dbb43c7280d0891cf0e1a7ec3b6dc 132 Pfam PF13698 Domain of unknown function (DUF4156) 41 131 5.4E-32 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 YpsIP31758_2501 0f5a6e1f64ac7d8f48925f4690d4135f 86 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 1 55 6.9E-17 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YpsIP31758_0270 4d9728bd8ea02a78df5f82f4ad0689d5 501 Pfam PF02646 RmuC family 171 467 6.4E-105 T 12-10-2018 IPR003798 DNA recombination RmuC YpsIP31758_0480 c2581e6f8c711b661f0875c22a24ff5e 131 Pfam PF07681 DoxX 8 88 2.3E-16 T 12-10-2018 IPR032808 DoxX family YpsIP31758_3880 9bb7240408d73d92bc0faf2260f9e03a 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.8E-60 T 12-10-2018 IPR007456 Smg YpsIP31758_3880 9bb7240408d73d92bc0faf2260f9e03a 157 Hamap MF_00598 Protein Smg [smg]. 1 157 31.289 T 12-10-2018 IPR007456 Smg YpsIP31758_0903 7aa9f168cc51ba00fd32c9a46a68f5ee 101 Pfam PF05488 PAAR motif 21 90 2.3E-22 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_0903 7aa9f168cc51ba00fd32c9a46a68f5ee 101 Gene3D G3DSA:2.60.200.60 12 98 2.8E-10 T 12-10-2018 YpsIP31758_A0048 d1096119e385f789f06fa730f231a64d 126 Pfam PF04956 TrbC/VIRB2 family 9 106 1.9E-18 T 12-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 YpsIP31758_2194 0e30493fb4c561e33b701f12083ce4c2 71 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.4E-18 T 12-10-2018 IPR007684 Zinc finger, Ogr/Delta-type YpsIP31758_2801 bc84a6d618e6213e8be858012096ff09 367 Pfam PF05076 Suppressor of fused protein (SUFU) 201 363 3.7E-22 T 12-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 YpsIP31758_2338 ed2c7f1078904f3110975f03a1b37756 294 Pfam PF05425 Copper resistance protein D 189 287 1.4E-19 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 YpsIP31758_2383 06be050030ade4d14f88e674e8c99b61 99 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 5.2E-14 T 12-10-2018 IPR019701 Bacteriophage P22, NinX YpsIP31758_2385 828d02213c49c16c0c8bd65bdcbe362d 77 Pfam PF13996 YobH-like protein 3 70 8.0E-35 T 12-10-2018 IPR025611 YobH-like protein YpsIP31758_B0091 3ec4a748c101d54cd4dace2a2f6d1a32 276 Pfam PF14280 Domain of unknown function (DUF4365) 12 135 7.9E-12 T 12-10-2018 IPR025375 Domain of unknown function DUF4365 YpsIP31758_2795 e65634d85213d45337a9c7e10aab6a82 157 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 3.1E-25 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 YpsIP31758_2795 e65634d85213d45337a9c7e10aab6a82 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.5E-27 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 YpsIP31758_2899 c501220ea87ba14bcd81957c49e79617 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.7E-8 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YpsIP31758_A0049 2c63858d27d6022cc9b2c915271ddfbc 104 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 13 92 1.0E-28 T 12-10-2018 YpsIP31758_A0049 2c63858d27d6022cc9b2c915271ddfbc 104 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 5 84 5.5E-17 T 12-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB YpsIP31758_A0049 2c63858d27d6022cc9b2c915271ddfbc 104 PIRSF PIRSF017854 1 89 6.3E-31 T 12-10-2018 IPR016704 Conjugal transfer, TrbD YpsIP31758_1521 c85b782afce6d02a241eb387bb568233 397 Pfam PF13332 Haemagluttinin repeat 60 209 1.0E-36 T 12-10-2018 IPR025157 Hemagglutinin repeat YpsIP31758_2749 c92f6cd5e3fa12f16bdbd2a0f462533e 159 Pfam PF06530 Phage antitermination protein Q 20 140 8.3E-41 T 12-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YpsIP31758_2037 4f9a4da33a91045c362033b3a2b9f65b 131 Pfam PF01124 MAPEG family 4 120 2.8E-24 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YpsIP31758_2037 4f9a4da33a91045c362033b3a2b9f65b 131 Gene3D G3DSA:1.20.120.550 1 128 8.4E-25 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YpsIP31758_2037 4f9a4da33a91045c362033b3a2b9f65b 131 SUPERFAMILY SSF161084 4 125 8.11E-30 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YpsIP31758_3628 6f93087d885c75848feda0e9636a1f3f 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 6.0E-32 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 YpsIP31758_3628 6f93087d885c75848feda0e9636a1f3f 70 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 2.8E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 YpsIP31758_3628 6f93087d885c75848feda0e9636a1f3f 70 Gene3D G3DSA:3.30.1910.10 1 64 1.2E-26 T 12-10-2018 YpsIP31758_2360 0b7c62ec4dc46309f2dd2115bc672eb8 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 6.1E-134 T 12-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 YpsIP31758_2360 0b7c62ec4dc46309f2dd2115bc672eb8 267 SUPERFAMILY SSF56529 4 267 1.23E-75 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2360 0b7c62ec4dc46309f2dd2115bc672eb8 267 Gene3D G3DSA:3.90.850.10 1 267 3.0E-79 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YpsIP31758_2935 16ee7d1919f3174b6231325435d8f50e 225 Gene3D G3DSA:2.40.50.230 34 132 8.2E-23 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily YpsIP31758_3019 e0a5587e39f6c7214b5eb586f76bf418 809 Pfam PF02687 FtsX-like permease family 714 800 1.7E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YpsIP31758_3695 0c66e51545f5c443dcfd2021da91b04d 184 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2 62 2.9E-27 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 YpsIP31758_3695 0c66e51545f5c443dcfd2021da91b04d 184 PRINTS PR00394 RHS protein signature 7 27 6.5E-12 T 12-10-2018 IPR001826 RHS protein YpsIP31758_3695 0c66e51545f5c443dcfd2021da91b04d 184 PRINTS PR00394 RHS protein signature 30 49 6.5E-12 T 12-10-2018 IPR001826 RHS protein YpsIP31758_3695 0c66e51545f5c443dcfd2021da91b04d 184 Gene3D G3DSA:2.180.10.10 1 62 5.4E-27 T 12-10-2018 YpsIP31758_2228 8df066599ab161d287afe7c27ef8f6b7 338 Gene3D G3DSA:1.10.10.1400 95 161 5.7E-9 T 12-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily YpsIP31758_2228 8df066599ab161d287afe7c27ef8f6b7 338 Pfam PF03592 Terminase small subunit 99 305 2.7E-24 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 YpsIP31758_2458 31c32425a69b724a1353f83634d8c2be 417 SUPERFAMILY SSF51004 15 318 3.66E-9 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily YpsIP31758_2458 31c32425a69b724a1353f83634d8c2be 417 Pfam PF08309 LVIVD repeat 221 249 0.35 T 12-10-2018 IPR013211 LVIVD YpsIP31758_0595 8aa684092f66689071a350f8273e7c46 156 Pfam PF07811 TadE-like protein 14 55 6.4E-9 T 12-10-2018 IPR012495 TadE-like YpsIP31758_2460 e604cec2aa252629252913a2b86928e0 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 24.141 T 12-10-2018 IPR022957 Uncharacterised protein family UPF0299 YpsIP31758_2460 e604cec2aa252629252913a2b86928e0 135 Pfam PF03788 LrgA family 23 113 6.0E-29 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 YpsIP31758_2384 aeac2f980bc0f88363b02167a077333c 91 Pfam PF13974 YebO-like protein 16 91 3.8E-29 T 12-10-2018 IPR025594 YebO-like protein YpsIP31758_3246 2e707a71d1561ba06485843f0507c084 474 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 471 2.7E-38 T 12-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 YpsIP31758_3246 2e707a71d1561ba06485843f0507c084 474 SUPERFAMILY SSF53743 6 325 2.75E-65 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 YpsIP31758_3075 a4f8073c8c55f445588e4fbcdb976b21 173 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 48 152 3.1E-41 T 12-10-2018 IPR039366 YscW/ExsB YpsIP31758_4033 e3fa524239ff7529ae477549ec4d3a8e 498 Pfam PF01384 Phosphate transporter family 30 487 7.5E-88 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 YpsIP31758_4183 671f1d6ac4dff2c4555e30eac6cc0319 127 Pfam PF03899 ATP synthase I chain 13 109 2.9E-18 T 12-10-2018 IPR005598 ATP synthase protein I YpsIP31758_A0007 54c4fbfc8b8188698f230e24350bf0ec 99 Pfam PF07424 TrbM 25 90 1.2E-4 T 12-10-2018 IPR009989 TrbM YpsIP31758_1309 7c78d0f5ff5709dbdbaee615db7b0ac4 486 Gene3D G3DSA:1.20.1730.10 22 485 1.2E-25 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily YpsIP31758_1088 62b0053046094cc4a15e79586c3cc54d 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 3.4E-19 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_1088 62b0053046094cc4a15e79586c3cc54d 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.344 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YpsIP31758_0628 bfb9f8977a440d37c3a42b3d410a45ce 292 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 218 277 1.6E-7 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) YpsIP31758_0628 bfb9f8977a440d37c3a42b3d410a45ce 292 SUPERFAMILY SSF101801 214 277 1.31E-6 T 12-10-2018 IPR036429 SpoA-like superfamily YpsIP31758_3004 3256ca64bb06b6c706e56de6736bfb27 210 SUPERFAMILY SSF69593 5 184 8.37E-35 T 12-10-2018 YpsIP31758_3004 3256ca64bb06b6c706e56de6736bfb27 210 SMART SM00563 38 157 6.4E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_3004 3256ca64bb06b6c706e56de6736bfb27 210 Pfam PF01553 Acyltransferase 24 154 4.5E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YpsIP31758_4051 00df2f8c313d23f0e85b9be38a3b2d5b 422 Pfam PF02447 GntP family permease 8 415 1.7E-24 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YpsIP31758_2370 dd8ee5a4814f029f762089069028736b 292 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 20 290 1.2E-142 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YpsIP31758_2370 dd8ee5a4814f029f762089069028736b 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 21 290 6.2E-112 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YpsIP31758_4104 83e53e0a5826048510bd696fdbc898e4 328 Gene3D G3DSA:2.60.40.1090 199 327 2.8E-6 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 YpsIP31758_4104 83e53e0a5826048510bd696fdbc898e4 328 Pfam PF00419 Fimbrial protein 205 327 3.7E-10 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YpsIP31758_4104 83e53e0a5826048510bd696fdbc898e4 328 SUPERFAMILY SSF49401 203 327 2.73E-11 T 12-10-2018 IPR008966 Adhesion domain superfamily YpsIP31758_1000 8aa146c21569963cc775be6e9d6fe2c9 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 3.7E-23 T 12-10-2018 IPR006696 Protein of unknown function DUF423 YpsIP31758_A0062 8147ca94c454e5523c6e7233ca748327 147 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 34 133 4.4E-23 T 12-10-2018 IPR022753 Type IV pilus biogenesis PilP YpsIP31758_0482 2f1a6977d911fc016aa8da3b0fa16fe6 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 2.1E-20 T 12-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YpsIP31758_0494 cea4d96c06ca26bf52dce3e4cb5db977 176 PIRSF PIRSF011443 1 176 5.0E-60 T 12-10-2018 IPR026267 Inner membrane protein YgjV YpsIP31758_0494 cea4d96c06ca26bf52dce3e4cb5db977 176 Pfam PF10688 Bacterial inner membrane protein 5 162 5.6E-52 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV YpsIP31758_3727 7af1e8351c47a596b4b2eed24c1d9d6b 425 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 37 347 3.8E-126 T 12-10-2018 IPR007001 Bacterial shufflon protein, N-terminal YpsIP31758_3779 61d0443b0d6b5798dabc64777500fef0 472 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 119 139 - T 12-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 YpsIP31758_0987 8ece763830dd0082c68896e3bf308df6 156 Pfam PF10713 Protein of unknown function (DUF2509) 18 154 5.6E-43 T 12-10-2018 IPR019652 Protein of unknown function DUF2509 YpsIP31758_0204 a25be193d5dd635d9377a6687609011b 66 Pfam PF13627 Prokaryotic lipoprotein-attachment site 10 29 9.3E-9 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site YpsIP31758_0261 34432369c5f6b9bcb2e6fdebf3596f6d 318 Pfam PF03547 Membrane transport protein 17 154 6.6E-10 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YpsIP31758_0261 34432369c5f6b9bcb2e6fdebf3596f6d 318 Pfam PF03547 Membrane transport protein 169 310 2.7E-15 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YpsIP31758_2514 d45059925ce3f933c691d7898d83ce63 146 Pfam PF13924 Lipocalin-like domain 11 144 1.9E-32 T 12-10-2018 IPR024311 Lipocalin-like domain YpsIP31758_0755 c5cbdc0cbf1d36127a625e0648e88538 155 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 7 152 7.0E-37 T 12-10-2018 YpsIP31758_2249 4db97718364e6b1aacb46ec6f8043260 78 Pfam PF13986 Domain of unknown function (DUF4224) 8 51 2.4E-17 T 12-10-2018 IPR025319 Domain of unknown function DUF4224 YpsIP31758_3514 b47a6efea8697c3824d284965f5c77c0 77 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 71 3.1E-8 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YpsIP31758_3583 15c0e4db20093ab3bb5ffcacc310d107 292 Pfam PF01136 Peptidase family U32 92 209 1.1E-11 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YpsIP31758_1806 ab153db647b20eba5107024d143d0dd3 136 Pfam PF03891 Domain of unknown function (DUF333) 85 132 2.5E-20 T 12-10-2018 IPR005590 Protein of unknown function DUF333 YpsIP31758_0871 496e15cb0b679ef7cd711179aafe063a 165 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 3 159 1.1E-67 T 12-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane YpsIP31758_1359 881c6e9620625deac532dce11eb20352 397 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 2.4E-29 T 12-10-2018 IPR010657 ImpA, N-terminal YpsIP31758_3433 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 Pfam PF04965 Gene 25-like lysozyme 25 121 1.9E-12 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD YpsIP31758_2076 997874e92105d6a5a33bc8cbef18fcb4 132 SUPERFAMILY SSF48295 4 55 6.28E-13 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YpsIP31758_1119 c90a015eb503e7a8070a07af354d1e85 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 4.8E-130 T 12-10-2018 IPR009323 Protein of unknown function DUF979 YpsIP31758_0550 15765920cb78637f03b6d01ce5f77ab4 176 SUPERFAMILY SSF160631 61 157 2.49E-5 T 12-10-2018 YpsIP31758_3563 6861f3a202a092d68752e78d291048e6 293 PIRSF PIRSF011468 1 288 2.5E-165 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3563 6861f3a202a092d68752e78d291048e6 293 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.8E-146 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YpsIP31758_3425 52632b49181d264d90dc896f52cbe840 121 Pfam PF13665 Domain of unknown function (DUF4150) 18 106 2.3E-12 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 YpsIP31758_2190 292a7dd79c85de25ae4bac812dca89f2 40 Pfam PF06528 Phage P2 GpE 2 36 2.4E-17 T 12-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 YpsIP31758_1111 2354ed37e4b3dda9959cb0622a1bb56d 168 Pfam PF08349 Protein of unknown function (DUF1722) 41 156 2.8E-35 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 YpsIP31758_3438 59c5d1d278d4da5a6f6e6a04169a79ea 247 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 184 247 7.4E-11 T 12-10-2018 IPR018754 Protein of unknown function DUF2285 YpsIP31758_1532 fa76fc7920825af3ba4b97bcf1075b2e 371 SUPERFAMILY SSF56925 169 371 1.81E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YpsIP31758_1624 51f8049ddef92f3187c5dc480633ab6b 299 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 25 298 2.9E-113 T 12-10-2018 IPR021266 Kdo hydroxylase YpsIP31758_3821 47f1744901cbf7d24a937a8e5152d094 197 Pfam PF13327 Type III secretion system subunit 10 171 1.9E-64 T 12-10-2018 IPR025292 Type III secretion system protein YpsIP31758_2141 af16b4ccfe5a3691e790e1e7819a90a7 639 Pfam PF03239 Iron permease FTR1 family 156 556 1.4E-95 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 YpsIP31758_1331 3cc3a325471581b64e7a44eebc992caf 158 Pfam PF05232 Chlorhexidine efflux transporter 74 136 5.0E-24 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter YpsIP31758_1331 3cc3a325471581b64e7a44eebc992caf 158 Pfam PF05232 Chlorhexidine efflux transporter 6 68 5.6E-24 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter YpsIP31758_2391 46182cffe27e49c4c56efb16947f2e5d 94 SUPERFAMILY SSF54909 1 81 1.64E-13 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel YpsIP31758_2391 46182cffe27e49c4c56efb16947f2e5d 94 Pfam PF03795 YCII-related domain 1 79 3.2E-10 T 12-10-2018 IPR005545 YCII-related YpsIP31758_2734 565aca21365a12b26dac9f784b5e09b5 151 Pfam PF07409 Phage protein GP46 30 136 3.9E-41 T 12-10-2018 IPR010877 Bacteriophage Mu, Gp46 YpsIP31758_2740 6e562ba9ce64535dbafd93a4b15155ac 122 Pfam PF10618 Phage tail tube protein 6 121 2.7E-42 T 12-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube YpsIP31758_4166 8f8e63342a9a3a0886711f36ddd4976a 210 Pfam PF04519 Polymer-forming cytoskeletal 74 170 1.3E-17 T 12-10-2018 IPR007607 Bactofilin A/B YpsIP31758_0043 55fdb40d21f065fc8b3ec8ce5e1aaeba 205 Pfam PF03458 UPF0126 domain 5 79 4.8E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 YpsIP31758_0043 55fdb40d21f065fc8b3ec8ce5e1aaeba 205 Pfam PF03458 UPF0126 domain 91 164 6.9E-21 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 YpsIP31758_2218 2288673bfd82bd7273d9e64051bf2a43 385 Pfam PF11863 Protein of unknown function (DUF3383) 103 325 3.6E-17 T 12-10-2018 IPR021808 Protein of unknown function DUF3383 YpsIP31758_0336 28879fa6dd41ca9f221fa127bb65801d 74 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 70 4.7E-22 T 12-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YpsIP31758_2959 583de6522ba0017a2341180b84c75bb2 160 Gene3D G3DSA:2.40.50.140 1 69 4.2E-18 T 12-10-2018 YpsIP31758_2959 583de6522ba0017a2341180b84c75bb2 160 Pfam PF00313 'Cold-shock' DNA-binding domain 2 62 6.7E-10 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YpsIP31758_2959 583de6522ba0017a2341180b84c75bb2 160 SUPERFAMILY SSF50249 1 63 2.69E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold YpsIP31758_A0061 a2e8531555f1e9fb0e8953864f21db00 444 Pfam PF06864 Pilin accessory protein (PilO) 21 440 3.6E-63 T 12-10-2018 IPR009663 Pilin accessory predicted YpsIP31758_2482 40dc2b1de2fa13b85e268ec7fb186c64 215 Pfam PF16809 NleF caspase inhibitor 56 207 1.0E-53 T 12-10-2018 IPR031829 Effector protein NleF YpsIP31758_3847 5acf6fe22513978049f2a1098697eb3e 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 1.4E-76 T 12-10-2018 IPR007338 Protein of unknown function DUF416 YpsIP31758_3847 5acf6fe22513978049f2a1098697eb3e 196 Gene3D G3DSA:1.20.1590.10 3 194 5.2E-64 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily YpsIP31758_1375 b2fcd233094037d21a7538a09882c69c 86 Pfam PF05488 PAAR motif 8 76 7.8E-12 T 12-10-2018 IPR008727 PAAR motif YpsIP31758_1375 b2fcd233094037d21a7538a09882c69c 86 Gene3D G3DSA:2.60.200.60 2 85 2.7E-14 T 12-10-2018 YpsIP31758_0821 51cd6ebe7236f4bb3339fc0684b53e87 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.6E-43 T 12-10-2018 IPR007416 Protein of unknown function DUF469 YpsIP31758_0269 0ddbde6aed8a12b4b74ccbb5d810ac0c 176 Pfam PF09335 SNARE associated Golgi protein 41 164 5.8E-13 T 12-10-2018 IPR032816 SNARE associated Golgi protein YpsIP31758_2092 337a682c39559e7759db4c7d6b9075c5 316 SUPERFAMILY SSF51182 27 204 6.52E-9 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily YpsIP31758_2623 d6a0a01660040c52746bb85e6203b804 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 2.0E-13 T 12-10-2018 IPR024289 Domain of unknown function DUF3828 YpsIP31758_3709 5abbc78285b9413a8f323f1e957d2461 217 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 2.8E-98 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 YpsIP31758_3709 5abbc78285b9413a8f323f1e957d2461 217 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 7.8E-87 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 YpsIP31758_1562 e86ceec10f7a002e0fe85964d8eb4dce 37 Pfam PF10968 Protein of unknown function (DUF2770) 2 37 1.6E-17 T 12-10-2018 IPR024494 Protein of unknown function DUF2770 YpsIP31758_3714 b465cdd209193e80ef9a2ee54720d384 295 Pfam PF11185 Protein of unknown function (DUF2971) 152 227 6.5E-8 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 YpsIP31758_3198 ab138a7d3cd59fc48d6ab724efac99f1 257 Pfam PF03591 AzlC protein 27 167 1.8E-38 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease YpsIP31758_0411 1d5898c4b577d279314e617fab192fba 119 Pfam PF10828 Protein of unknown function (DUF2570) 15 109 8.7E-7 T 12-10-2018 IPR022538 Protein of unknown function DUF2570 YpsIP31758_2549 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 162 220 4.0E-8 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_2549 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 45 136 4.4E-11 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_2549 834019fca096065c34e7383ae283cad2 550 Pfam PF02470 MlaD protein 292 393 8.1E-13 T 12-10-2018 IPR003399 Mce/MlaD YpsIP31758_1409 d387f0dfcbb6edfdcd6243c7249ee153 92 Pfam PF08891 YfcL protein 4 86 3.1E-37 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL YpsIP31758_2200 4b4cc6b82d4197534fe88bf6c84abc4a 399 Pfam PF04865 Baseplate J-like protein 72 321 5.0E-21 T 12-10-2018 IPR006949 Baseplate protein J-like YpsIP31758_2838 e7873defc64c30c388ce652057e7f7f7 81 Pfam PF09905 DNA-binding protein VF530 7 68 7.9E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 YpsIP31758_2838 e7873defc64c30c388ce652057e7f7f7 81 Gene3D G3DSA:1.10.720.30 14 73 3.2E-31 T 12-10-2018 IPR036361 SAP domain superfamily YpsIP31758_2490 a7ed010cff909dcaad258c0d4ee6c7e2 152 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 7 149 1.9E-43 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_0591 025f3fe9c549568ea7c13179a08c1ee6 237 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 4 215 3.7E-97 T 12-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0591 025f3fe9c549568ea7c13179a08c1ee6 237 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 201 2.4E-35 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YpsIP31758_3999 98c58fd307b3cd49210c6f95cda65e0a 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 6.0E-65 T 12-10-2018 IPR010351 Protein of unknown function DUF943 YpsIP31758_2382 9c7020ff8bfe6ef74d0c214c9179a29f 81 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 2.7E-39 T 12-10-2018 IPR025135 Protein of unknown function DUF4060 YpsIP31758_1509 63ed43e22b727223831b8f18a32585b9 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 321 8.5E-52 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_0366 b68deb1ef8825e3a9c1009350ede4707 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 1.0E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 YpsIP31758_1381 1da817655a7c5f20c381e3bebacbd122 661 Pfam PF09972 Predicted membrane protein (DUF2207) 34 589 2.4E-68 T 12-10-2018 IPR018702 Protein of unknown function DUF2207, membrane YpsIP31758_0938 ee9d56fd5dd9420fbc91abd59445dc26 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 295 3.1E-80 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YpsIP31758_2832 60a99b777376da0483268e83ceb12218 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 6.6E-62 T 12-10-2018 IPR006214 Bax inhibitor 1-related YpsIP31758_0741 94cb2304837e1b1f895378d41e808452 122 Pfam PF03400 IS1 transposase 2 120 5.2E-46 T 12-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 YpsIP31758_3426 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 133 205 9.7E-13 T 12-10-2018 IPR021927 Protein of unknown function DUF3540 YpsIP31758_3426 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 55 127 2.2E-10 T 12-10-2018 IPR021927 Protein of unknown function DUF3540 YpsIP31758_1907 79410f6b98172dd158f05ac0ecfbe802 101 Pfam PF04328 Selenoprotein, putative 38 101 1.3E-24 T 12-10-2018 IPR007423 Selenoprotein, putative YpsIP31758_A0059 185a1b6a75aea9963b5c27363e449899 310 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 221 304 1.3E-15 T 12-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal YpsIP31758_0223 389bc2fa1776ad5e236d90b05dab5539 411 Pfam PF03272 Putative mucin or carbohydrate-binding module 47 142 1.3E-11 T 12-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain YpsIP31758_0223 389bc2fa1776ad5e236d90b05dab5539 411 Pfam PF03272 Putative mucin or carbohydrate-binding module 242 353 8.7E-31 T 12-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain YpsIP31758_1324 493782b88072ae7631215c6358166baf 201 Pfam PF06042 Nucleotidyltransferase 23 199 2.4E-66 T 12-10-2018 IPR009267 Putative nucleotidyltransferase YpsIP31758_2254 72fd037fea58b3d2916bce6e7fbdfdbb 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 8.3E-38 T 12-10-2018