locus-tag class description YPTB0001 IPR008254 Flavodoxin/nitric oxide synthase YPTB0001 IPR029039 Flavoprotein-like superfamily YPTB0002 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0002 IPR011991 ArsR-like helix-turn-helix domain YPTB0002 IPR000485 AsnC-type HTH domain YPTB0002 IPR011008 Dimeric alpha-beta barrel YPTB0002 IPR019888 Transcription regulator AsnC-type YPTB0002 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB0002 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB0002 IPR036390 Winged helix DNA-binding domain superfamily YPTB0003 IPR004618 Aspartate--ammonia ligase YPTB0003 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB0004 IPR002035 von Willebrand factor, type A YPTB0004 IPR036465 von Willebrand factor A-like domain superfamily YPTB0004 IPR008912 Uncharacterised protein family CoxE-like YPTB0004 IPR023481 Uncharacterised protein family ViaA YPTB0005 IPR011704 ATPase, dynein-related, AAA domain YPTB0005 IPR041538 ATPase RavA-like, AAA lid domain YPTB0005 IPR003593 AAA+ ATPase domain YPTB0005 IPR023671 ATPase RavA YPTB0005 IPR022547 ATPase, RavA, C-terminal YPTB0005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0006 IPR003855 Potassium transporter YPTB0006 IPR023051 Potassium uptake protein, low affinity, Kup YPTB0007 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPTB0007 IPR023750 RbsD-like superfamily YPTB0007 IPR023064 D-ribose pyranase YPTB0008 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB0008 IPR011877 Ribokinase YPTB0008 IPR029056 Ribokinase-like YPTB0008 IPR002139 Ribokinase/fructokinase YPTB0008 IPR011611 Carbohydrate kinase PfkB YPTB0010 IPR004638 Drug resistance transporter EmrB-like YPTB0010 IPR011701 Major facilitator superfamily YPTB0010 IPR036259 MFS transporter superfamily YPTB0010 IPR020846 Major facilitator superfamily domain YPTB0011 IPR011711 GntR, C-terminal YPTB0011 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB0011 IPR036390 Winged helix DNA-binding domain superfamily YPTB0011 IPR000524 Transcription regulator HTH, GntR YPTB0011 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0012 IPR001207 Transposase, mutator type YPTB0013 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPTB0013 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0015 IPR038134 YihD-like superfamily YPTB0015 IPR009383 Protein of unknown function DUF1040 YPTB0016 IPR002575 Aminoglycoside phosphotransferase YPTB0016 IPR032882 SrkA/RdoA protein kinase YPTB0016 IPR011009 Protein kinase-like domain superfamily YPTB0017 IPR013766 Thioredoxin domain YPTB0017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPTB0017 IPR017937 Thioredoxin, conserved site YPTB0017 IPR036249 Thioredoxin-like superfamily YPTB0017 IPR001853 DSBA-like thioredoxin domain YPTB0018 IPR002298 DNA polymerase A YPTB0018 IPR012337 Ribonuclease H-like superfamily YPTB0018 IPR008918 Helix-hairpin-helix motif, class 2 YPTB0018 IPR018320 DNA polymerase 1 YPTB0018 IPR036397 Ribonuclease H superfamily YPTB0018 IPR029060 PIN-like domain superfamily YPTB0018 IPR002562 3'-5' exonuclease domain YPTB0018 IPR020045 DNA polymerase I-like, H3TH domain YPTB0018 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPTB0018 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPTB0018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPTB0018 IPR002421 5'-3' exonuclease, N-terminal YPTB0018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPTB0019 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPTB0019 IPR006073 GTP binding domain YPTB0019 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0019 IPR030393 EngB-type guanine nucleotide-binding (G) domain YPTB0020 IPR007336 Der GTPase activator YPTB0021 IPR023404 Radical SAM, alpha/beta horseshoe YPTB0021 IPR007197 Radical SAM YPTB0021 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTB0021 IPR006638 Elp3/MiaB/NifB YPTB0021 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN YPTB0021 IPR010723 HemN, C-terminal YPTB0022 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB0022 IPR001789 Signal transduction response regulator, receiver domain YPTB0022 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0022 IPR002197 DNA binding HTH domain, Fis-type YPTB0022 IPR009057 Homeobox-like domain superfamily YPTB0022 IPR011006 CheY-like superfamily YPTB0022 IPR003593 AAA+ ATPase domain YPTB0022 IPR010114 DNA-binding transcriptional regulator NtrC YPTB0022 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB0022 IPR025944 Sigma-54 interaction domain, conserved site YPTB0022 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB0023 IPR005467 Histidine kinase domain YPTB0023 IPR013767 PAS fold YPTB0023 IPR035965 PAS domain superfamily YPTB0023 IPR000014 PAS domain YPTB0023 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0023 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0023 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0023 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0023 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0024 IPR027303 Glutamine synthetase, glycine-rich site YPTB0024 IPR004809 Glutamine synthetase type I YPTB0024 IPR001637 Glutamine synthetase class-I, adenylation site YPTB0024 IPR008146 Glutamine synthetase, catalytic domain YPTB0024 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPTB0024 IPR027302 Glutamine synthetase, N-terminal conserved site YPTB0024 IPR036651 Glutamine synthetase, N-terminal domain superfamily YPTB0024 IPR008147 Glutamine synthetase, beta-Grasp domain YPTB0026 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB0026 IPR023214 HAD superfamily YPTB0026 IPR041492 Haloacid dehalogenase-like hydrolase YPTB0026 IPR006439 HAD hydrolase, subfamily IA YPTB0026 IPR036412 HAD-like superfamily YPTB0027 IPR017039 Virulence factor BrkB YPTB0027 IPR023679 Uncharacterised protein family UPF0761, bacterial YPTB0028 IPR003732 D-aminoacyl-tRNA deacylase DTD YPTB0028 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YPTB0029 IPR016181 Acyl-CoA N-acyltransferase YPTB0029 IPR000182 GNAT domain YPTB0029 IPR029069 HotDog domain superfamily YPTB0029 IPR012660 Thioesterase, putative YPTB0030 IPR007844 AsmA YPTB0031 IPR006043 Xanthine/uracil/vitamin C permease YPTB0031 IPR006042 Xanthine/uracil permease YPTB0032 IPR004445 Sodium/glutamate symport carrier protein GltS YPTB0033 IPR012340 Nucleic acid-binding, OB-fold YPTB0033 IPR033454 RecG, wedge domain YPTB0033 IPR011545 DEAD/DEAH box helicase domain YPTB0033 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0033 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0033 IPR004609 ATP-dependent DNA helicase RecG YPTB0033 IPR001650 Helicase, C-terminal YPTB0034 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB0034 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase YPTB0034 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTB0034 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPTB0034 IPR029028 Alpha/beta knot methyltransferases YPTB0035 IPR012676 TGS-like YPTB0035 IPR003607 HD/PDEase domain YPTB0035 IPR012675 Beta-grasp domain superfamily YPTB0035 IPR007685 RelA/SpoT YPTB0035 IPR004095 TGS YPTB0035 IPR033655 RelA, TGS domain YPTB0035 IPR002912 ACT domain YPTB0035 IPR004811 RelA/SpoT family YPTB0036 IPR012293 RNA polymerase subunit, RPB6/omega YPTB0036 IPR036161 RPB6/omega subunit-like superfamily YPTB0036 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPTB0036 IPR003716 DNA-directed RNA polymerase, omega subunit YPTB0037 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0037 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTB0037 IPR017665 Guanylate kinase YPTB0037 IPR020590 Guanylate kinase, conserved site YPTB0037 IPR008144 Guanylate kinase-like domain YPTB0038 IPR013839 NAD-dependent DNA ligase, adenylation YPTB0038 IPR010994 RuvA domain 2-like YPTB0038 IPR013840 NAD-dependent DNA ligase, N-terminal YPTB0038 IPR012340 Nucleic acid-binding, OB-fold YPTB0038 IPR004150 NAD-dependent DNA ligase, OB-fold YPTB0038 IPR020923 DNA ligase B YPTB0039 IPR005115 Uncharacterised domain UPF0126 YPTB0040 IPR013551 Domain of unknown function DUF1732 YPTB0040 IPR013527 YicC-like, N-terminal YPTB0040 IPR005229 Conserved hypothetical protein CHP00255 YPTB0041 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0041 IPR036345 Exoribonuclease, PH domain 2 superfamily YPTB0041 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPTB0041 IPR002381 Ribonuclease PH, bacterial-type YPTB0041 IPR027408 PNPase/RNase PH domain superfamily YPTB0041 IPR018336 Ribonuclease PH, conserved site YPTB0041 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPTB0042 IPR000836 Phosphoribosyltransferase domain YPTB0042 IPR023031 Orotate phosphoribosyltransferase YPTB0042 IPR004467 Orotate phosphoribosyl transferase domain YPTB0042 IPR029057 Phosphoribosyltransferase-like YPTB0043 IPR009057 Homeobox-like domain superfamily YPTB0043 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB0043 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB0043 IPR023769 Nucleoid occlusion factor SlmA YPTB0043 IPR001647 DNA-binding HTH domain, TetR-type YPTB0044 IPR029054 dUTPase-like YPTB0044 IPR033704 dUTPase, trimeric YPTB0044 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPTB0044 IPR036157 dUTPase-like superfamily YPTB0045 IPR035929 CoaB-like superfamily YPTB0045 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPTB0045 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPTB0045 IPR036551 Flavin prenyltransferase-like YPTB0045 IPR003382 Flavoprotein YPTB0046 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTB0046 IPR001405 Uncharacterised protein family UPF0758 YPTB0046 IPR010994 RuvA domain 2-like YPTB0046 IPR025657 RadC-like JAB domain YPTB0046 IPR037518 MPN domain YPTB0046 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPTB0047 IPR026569 Ribosomal protein L28/L24 YPTB0047 IPR001383 Ribosomal protein L28 YPTB0047 IPR037147 Ribosomal protein L28/L24 superfamily YPTB0047 IPR034704 L28p-like YPTB0048 IPR011332 Zinc-binding ribosomal protein YPTB0048 IPR001705 Ribosomal protein L33 YPTB0048 IPR038584 Ribosomal protein L33 superfamily YPTB0048 IPR018264 Ribosomal protein L33, conserved site YPTB0049 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPTB0049 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPTB0049 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain YPTB0049 IPR020629 Formamidopyrimidine-DNA glycosylase YPTB0049 IPR010663 Zinc finger, FPG/IleRS-type YPTB0049 IPR035937 MutM-like, N-terminal YPTB0049 IPR010979 Ribosomal protein S13-like, H2TH YPTB0049 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type YPTB0050 IPR001980 Phosphopantetheine adenylyltransferase YPTB0050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0050 IPR004821 Cytidyltransferase-like domain YPTB0051 IPR029044 Nucleotide-diphospho-sugar transferases YPTB0051 IPR001173 Glycosyltransferase 2-like YPTB0052 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPTB0052 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily YPTB0052 IPR039901 3-deoxy-D-manno-octulosonic acid transferase YPTB0053 IPR011908 Lipopolysaccharide heptosyltransferase I YPTB0053 IPR002201 Glycosyl transferase, family 9 YPTB0054 IPR011910 ADP-heptose--LPS heptosyltransferase 2 YPTB0054 IPR002201 Glycosyl transferase, family 9 YPTB0055 IPR001509 NAD-dependent epimerase/dehydratase YPTB0055 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPTB0055 IPR036291 NAD(P)-binding domain superfamily YPTB0056 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0056 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPTB0056 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTB0056 IPR004839 Aminotransferase, class I/classII YPTB0056 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0056 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0057 IPR013149 Alcohol dehydrogenase, C-terminal YPTB0057 IPR013154 Alcohol dehydrogenase, N-terminal YPTB0057 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPTB0057 IPR004627 L-threonine 3-dehydrogenase YPTB0057 IPR020843 Polyketide synthase, enoylreductase domain YPTB0057 IPR036291 NAD(P)-binding domain superfamily YPTB0057 IPR011032 GroES-like superfamily YPTB0058 IPR006837 Divergent polysaccharide deacetylase YPTB0058 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB0059 IPR011055 Duplicated hybrid motif YPTB0059 IPR016047 Peptidase M23 YPTB0060 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPTB0060 IPR011258 BPG-independent PGAM, N-terminal YPTB0060 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily YPTB0060 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB0060 IPR006124 Metalloenzyme YPTB0061 IPR036873 Rhodanese-like domain superfamily YPTB0061 IPR001763 Rhodanese-like domain YPTB0062 IPR011900 Glutaredoxin, GrxC YPTB0062 IPR036249 Thioredoxin-like superfamily YPTB0062 IPR011767 Glutaredoxin active site YPTB0062 IPR002109 Glutaredoxin YPTB0062 IPR014025 Glutaredoxin subgroup YPTB0063 IPR035958 SecB-like superfamily YPTB0063 IPR003708 Bacterial protein export chaperone SecB YPTB0064 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPTB0064 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0064 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB0064 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPTB0064 IPR036291 NAD(P)-binding domain superfamily YPTB0064 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPTB0066 IPR010493 Serine acetyltransferase, N-terminal YPTB0066 IPR018357 Hexapeptide transferase, conserved site YPTB0066 IPR001451 Hexapeptide repeat YPTB0066 IPR005881 Serine O-acetyltransferase YPTB0066 IPR042122 Serine acetyltransferase, N-terminal domain superfamily YPTB0066 IPR011004 Trimeric LpxA-like superfamily YPTB0067 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPTB0067 IPR029028 Alpha/beta knot methyltransferases YPTB0067 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB0067 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTB0068 IPR035451 Ada-like domain superfamily YPTB0068 IPR004026 Ada DNA repair, metal-binding YPTB0068 IPR016221 Bifunctional regulatory protein Ada YPTB0068 IPR009057 Homeobox-like domain superfamily YPTB0068 IPR018060 DNA binding HTH domain, AraC-type YPTB0068 IPR018062 HTH domain AraC-type, conserved site YPTB0068 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPTB0068 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0068 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPTB0068 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPTB0068 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTB0068 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTB0069 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0069 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPTB0069 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0069 IPR005467 Histidine kinase domain YPTB0069 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0069 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0069 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0069 IPR038515 CpxA, periplasmic domain superfamily YPTB0069 IPR003660 HAMP domain YPTB0070 IPR039420 Transcriptional regulatory protein WalR-like YPTB0070 IPR001789 Signal transduction response regulator, receiver domain YPTB0070 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB0070 IPR011006 CheY-like superfamily YPTB0070 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0071 IPR012899 LTXXQ motif family protein YPTB0072 IPR010106 Recombination-promoting nuclease RpnA YPTB0072 IPR006842 Transposase (putative), YhgA-like YPTB0073 IPR023783 Cation efflux pump FieF YPTB0073 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPTB0073 IPR027470 Cation efflux protein, cytoplasmic domain YPTB0073 IPR027469 Cation efflux transmembrane domain superfamily YPTB0073 IPR002524 Cation efflux protein YPTB0074 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic YPTB0074 IPR035966 Phosphofructokinase superfamily YPTB0074 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type YPTB0074 IPR022953 ATP-dependent 6-phosphofructokinase YPTB0074 IPR015912 Phosphofructokinase, conserved site YPTB0074 IPR000023 Phosphofructokinase domain YPTB0075 IPR005669 Thiosulphate/Sulfate-binding protein YPTB0075 IPR034408 Sulphate/thiosulphate-binding site YPTB0075 IPR000957 Sulphate/thiosulphate-binding, conserved site YPTB0077 IPR001898 Solute carrier family 13 YPTB0077 IPR030676 Citrate carrier CitT-related YPTB0078 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPTB0078 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB0078 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPTB0079 IPR024078 Putative deacetylase LmbE-like domain superfamily YPTB0079 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPTB0080 IPR036390 Winged helix DNA-binding domain superfamily YPTB0080 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0080 IPR005119 LysR, substrate-binding YPTB0080 IPR000847 Transcription regulator HTH, LysR YPTB0081 IPR000652 Triosephosphate isomerase YPTB0081 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPTB0081 IPR035990 Triosephosphate isomerase superfamily YPTB0081 IPR013785 Aldolase-type TIM barrel YPTB0081 IPR020861 Triosephosphate isomerase, active site YPTB0082 IPR009918 Protein of unknown function DUF1454 YPTB0083 IPR008523 Protein of unknown function DUF805 YPTB0084 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB0084 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB0084 IPR033892 Ferredoxin--NADP reductase, bacteria YPTB0084 IPR017938 Riboflavin synthase-like beta-barrel YPTB0084 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB0084 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB0085 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPTB0086 IPR000577 Carbohydrate kinase, FGGY YPTB0086 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB0086 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTB0086 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB0086 IPR005999 Glycerol kinase YPTB0087 IPR023271 Aquaporin-like YPTB0087 IPR000425 Major intrinsic protein YPTB0087 IPR022357 Major intrinsic protein, conserved site YPTB0089 IPR009252 Cell division protein ZapB YPTB0090 IPR017871 ABC transporter, conserved site YPTB0090 IPR011527 ABC transporter type 1, transmembrane domain YPTB0090 IPR003439 ABC transporter-like YPTB0090 IPR033838 Colicin V processing peptidase YPTB0090 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0090 IPR005074 Peptidase C39, bacteriocin processing YPTB0090 IPR039421 Type I protein exporter YPTB0090 IPR003593 AAA+ ATPase domain YPTB0090 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB0091 IPR006144 Secretion protein HlyD, conserved site YPTB0091 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB0095 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPTB0095 IPR010203 Regulator of ribonuclease activity A YPTB0095 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTB0095 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPTB0096 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPTB0096 IPR026046 UbiA prenyltransferase domain containing protein 1 YPTB0096 IPR000537 UbiA prenyltransferase family YPTB0097 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0097 IPR004491 Heat shock protein HslU YPTB0097 IPR019489 Clp ATPase, C-terminal YPTB0097 IPR003959 ATPase, AAA-type, core YPTB0097 IPR003593 AAA+ ATPase domain YPTB0098 IPR001353 Proteasome, subunit alpha/beta YPTB0098 IPR022281 ATP-dependent protease, HslV subunit YPTB0098 IPR023333 Proteasome B-type subunit YPTB0098 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB0099 IPR007730 Sporulation-like domain YPTB0099 IPR011930 Cell division protein FtsN YPTB0099 IPR036680 Sporulation-like domain superfamily YPTB0100 IPR000843 LacI-type HTH domain YPTB0100 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB0100 IPR028082 Periplasmic binding protein-like I YPTB0101 IPR011545 DEAD/DEAH box helicase domain YPTB0101 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0101 IPR001650 Helicase, C-terminal YPTB0101 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0101 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain YPTB0101 IPR005259 Primosomal protein N' YPTB0101 IPR041236 Primosomal protein N, C-terminal domain YPTB0101 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily YPTB0101 IPR041222 Primosomal protein N', 3' DNA-binding domain YPTB0102 IPR027491 Ribosomal protein L31 type A YPTB0102 IPR042105 Ribosomal protein L31 superfamily YPTB0102 IPR002150 Ribosomal protein L31 YPTB0102 IPR034704 L28p-like YPTB0103 IPR038972 Inner membrane protein YiaA-like YPTB0103 IPR008024 YiaAB two helix YPTB0104 IPR010985 Ribbon-helix-helix YPTB0104 IPR002084 Methionine repressor MetJ YPTB0104 IPR023453 Methionine repressor MetJ domain superfamily YPTB0105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0105 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0105 IPR011821 O-succinylhomoserine (thiol)-lyase YPTB0105 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTB0106 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPTB0106 IPR018042 Aspartate kinase, conserved site YPTB0106 IPR019811 Homoserine dehydrogenase, conserved site YPTB0106 IPR001048 Aspartate/glutamate/uridylate kinase YPTB0106 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPTB0106 IPR036393 Acetylglutamate kinase-like superfamily YPTB0106 IPR001342 Homoserine dehydrogenase, catalytic YPTB0106 IPR001341 Aspartate kinase YPTB0106 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPTB0106 IPR036291 NAD(P)-binding domain superfamily YPTB0107 IPR004620 5,10-methylenetetrahydrofolate reductase YPTB0107 IPR003171 Methylenetetrahydrofolate reductase YPTB0107 IPR029041 FAD-linked oxidoreductase-like YPTB0108 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB0108 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site YPTB0108 IPR033129 Phosphoenolpyruvate carboxylase, His active site YPTB0108 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPTB0108 IPR021135 Phosphoenolpyruvate carboxylase YPTB0109 IPR010169 Acetylornithine deacetylase ArgE YPTB0109 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTB0109 IPR011650 Peptidase M20, dimerisation domain YPTB0109 IPR002933 Peptidase M20 YPTB0109 IPR036264 Bacterial exopeptidase dimerisation domain YPTB0110 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTB0110 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPTB0110 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPTB0110 IPR036291 NAD(P)-binding domain superfamily YPTB0110 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTB0111 IPR004662 Acetylglutamate kinase family YPTB0111 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic YPTB0111 IPR001048 Aspartate/glutamate/uridylate kinase YPTB0111 IPR036393 Acetylglutamate kinase-like superfamily YPTB0111 IPR037528 Acetylglutamate kinase ArgB YPTB0112 IPR022761 Fumarate lyase, N-terminal YPTB0112 IPR000362 Fumarate lyase family YPTB0112 IPR020557 Fumarate lyase, conserved site YPTB0112 IPR008948 L-Aspartase-like YPTB0112 IPR024083 Fumarase/histidase, N-terminal YPTB0112 IPR009049 Argininosuccinate lyase YPTB0112 IPR029419 Argininosuccinate lyase, C-terminal YPTB0113 IPR012910 TonB-dependent receptor, plug domain YPTB0113 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB0113 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB0113 IPR011276 TonB-dependent haem/haemoglobin receptor YPTB0113 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPTB0113 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB0113 IPR039426 Vitamin B12 transporter BtuB-like YPTB0115 IPR010128 ATPase, type I secretion system, PrtD YPTB0115 IPR017871 ABC transporter, conserved site YPTB0115 IPR003439 ABC transporter-like YPTB0115 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB0115 IPR011527 ABC transporter type 1, transmembrane domain YPTB0115 IPR003593 AAA+ ATPase domain YPTB0115 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0116 IPR010129 Type I secretion membrane fusion protein, HlyD family YPTB0116 IPR006144 Secretion protein HlyD, conserved site YPTB0117 IPR006260 TonB/TolA, C-terminal YPTB0117 IPR037682 TonB, C-terminal YPTB0118 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTB0118 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTB0118 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTB0118 IPR023753 FAD/NAD(P)-binding domain YPTB0118 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTB0118 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0118 IPR006258 Dihydrolipoamide dehydrogenase YPTB0119 IPR037944 Peroxiredoxin-5-like YPTB0119 IPR013740 Redoxin YPTB0119 IPR014025 Glutaredoxin subgroup YPTB0119 IPR011906 Glutaredoxin domain YPTB0119 IPR002109 Glutaredoxin YPTB0119 IPR011767 Glutaredoxin active site YPTB0119 IPR036249 Thioredoxin-like superfamily YPTB0120 IPR036390 Winged helix DNA-binding domain superfamily YPTB0120 IPR005119 LysR, substrate-binding YPTB0120 IPR000847 Transcription regulator HTH, LysR YPTB0120 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0121 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0121 IPR023753 FAD/NAD(P)-binding domain YPTB0121 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTB0121 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTB0121 IPR022962 Soluble pyridine nucleotide transhydrogenase YPTB0121 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTB0122 IPR023764 Transcriptional repressor HTH, FabR YPTB0122 IPR001647 DNA-binding HTH domain, TetR-type YPTB0122 IPR009057 Homeobox-like domain superfamily YPTB0123 IPR009867 Protein of unknown function DUF1422 YPTB0124 IPR030390 RNA methyltransferase TrmA, active site YPTB0124 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0124 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPTB0124 IPR010280 (Uracil-5)-methyltransferase family YPTB0124 IPR030391 RNA methyltransferase TrmA, conserved site YPTB0125 IPR012910 TonB-dependent receptor, plug domain YPTB0125 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB0125 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB0125 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB0125 IPR010917 TonB-dependent receptor, conserved site YPTB0125 IPR039426 Vitamin B12 transporter BtuB-like YPTB0125 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPTB0126 IPR033134 Asp/Glu racemase, active site 2 YPTB0126 IPR004391 Glutamate racemase YPTB0126 IPR015942 Asp/Glu/hydantoin racemase YPTB0126 IPR001920 Asp/Glu racemase YPTB0126 IPR018187 Asp/Glu racemase, active site 1 YPTB0127 IPR033893 ABC transporter periplasmic-binding protein YtfQ YPTB0127 IPR028082 Periplasmic binding protein-like I YPTB0127 IPR025997 Periplasmic binding protein YPTB0128 IPR003593 AAA+ ATPase domain YPTB0128 IPR003439 ABC transporter-like YPTB0128 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0128 IPR017871 ABC transporter, conserved site YPTB0129 IPR001851 ABC transporter, permease YPTB0130 IPR001851 ABC transporter, permease YPTB0131 IPR036390 Winged helix DNA-binding domain superfamily YPTB0131 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0131 IPR000847 Transcription regulator HTH, LysR YPTB0131 IPR020890 Transcription regulator HTH, HdfR YPTB0131 IPR005119 LysR, substrate-binding YPTB0132 IPR007335 Protein of unknown function DUF413 YPTB0133 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0133 IPR000523 Magnesium chelatase ChlI domain YPTB0133 IPR003593 AAA+ ATPase domain YPTB0133 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB0133 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0133 IPR004482 Mg chelatase-related protein YPTB0133 IPR025158 Mg chelatase-related protein, C-terminal domain YPTB0134 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTB0134 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTB0134 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB0134 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTB0134 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB0134 IPR000399 TPP-binding enzyme, conserved site YPTB0134 IPR029061 Thiamin diphosphate-binding fold YPTB0134 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB0135 IPR002912 ACT domain YPTB0136 IPR033939 Branched-chain aminotransferase YPTB0136 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPTB0136 IPR018300 Aminotransferase, class IV, conserved site YPTB0136 IPR001544 Aminotransferase class IV YPTB0136 IPR005785 Branched-chain amino acid aminotransferase I YPTB0137 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPTB0137 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPTB0137 IPR037237 IlvD/EDD, N-terminal domain YPTB0137 IPR004404 Dihydroxy-acid dehydratase YPTB0137 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPTB0138 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB0138 IPR005787 Threonine dehydratase, biosynthetic YPTB0138 IPR038110 Threonine dehydratase, ACT-like domain superfamily YPTB0138 IPR001721 Threonine dehydratase, ACT-like domain YPTB0138 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTB0138 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB0144 IPR000847 Transcription regulator HTH, LysR YPTB0144 IPR005119 LysR, substrate-binding YPTB0144 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain YPTB0144 IPR036390 Winged helix DNA-binding domain superfamily YPTB0144 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0145 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB0145 IPR000506 Ketol-acid reductoisomerase, C-terminal YPTB0145 IPR013023 Ketol-acid reductoisomerase YPTB0145 IPR013116 Ketol-acid reductoisomerase, N-terminal YPTB0145 IPR036291 NAD(P)-binding domain superfamily YPTB0149 IPR000290 Colicin immunity protein/pyocin immunity protein YPTB0149 IPR035900 Colicin E immunity protein superfamily YPTB0150 IPR003615 HNH nuclease YPTB0150 IPR036302 Pyosin/cloacin translocation domain superfamily YPTB0150 IPR016128 Pyosin/cloacin translocation domain YPTB0150 IPR003060 Pyocin S killer protein YPTB0150 IPR037146 Colicin/pyocin, DNase domain superfamily YPTB0151 IPR000290 Colicin immunity protein/pyocin immunity protein YPTB0151 IPR035900 Colicin E immunity protein superfamily YPTB0152 IPR024575 Cloacin colicin family YPTB0152 IPR016128 Pyosin/cloacin translocation domain YPTB0152 IPR036302 Pyosin/cloacin translocation domain superfamily YPTB0152 IPR037146 Colicin/pyocin, DNase domain superfamily YPTB0152 IPR003615 HNH nuclease YPTB0152 IPR024566 Colicin, receptor domain YPTB0153 IPR035900 Colicin E immunity protein superfamily YPTB0153 IPR000290 Colicin immunity protein/pyocin immunity protein YPTB0156 IPR001829 Pili assembly chaperone, bacterial YPTB0156 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB0156 IPR016148 Pili assembly chaperone, C-terminal YPTB0156 IPR008962 PapD-like superfamily YPTB0156 IPR016147 Pili assembly chaperone, N-terminal YPTB0156 IPR018046 Pili assembly chaperone, conserved site YPTB0156 IPR013783 Immunoglobulin-like fold YPTB0158 IPR025949 PapC-like, C-terminal domain YPTB0158 IPR037224 PapC, N-terminal domain superfamily YPTB0158 IPR000015 Outer membrane usher protein YPTB0158 IPR018030 Fimbrial membrane usher, conserved site YPTB0158 IPR042186 Outer membrane usher protein FimD, plug domain YPTB0158 IPR025885 PapC, N-terminal domain YPTB0159 IPR016147 Pili assembly chaperone, N-terminal YPTB0159 IPR008962 PapD-like superfamily YPTB0159 IPR016148 Pili assembly chaperone, C-terminal YPTB0159 IPR001829 Pili assembly chaperone, bacterial YPTB0159 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB0159 IPR018046 Pili assembly chaperone, conserved site YPTB0159 IPR013783 Immunoglobulin-like fold YPTB0162 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPTB0162 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTB0163 IPR014017 UvrD-like DNA helicase, C-terminal YPTB0163 IPR000212 DNA helicase, UvrD/REP type YPTB0163 IPR034739 UvrD/AddA helicase, N-terminal YPTB0163 IPR014016 UvrD-like helicase, ATP-binding domain YPTB0163 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0163 IPR005752 ATP-dependent DNA helicase Rep YPTB0163 IPR013986 DExx box DNA helicase domain superfamily YPTB0164 IPR030673 Pyrophosphatase, GppA/Ppx-type YPTB0164 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase YPTB0164 IPR003695 Ppx/GppA phosphatase YPTB0164 IPR022371 Exopolyphosphatase YPTB0165 IPR001650 Helicase, C-terminal YPTB0165 IPR011545 DEAD/DEAH box helicase domain YPTB0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0165 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0165 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB0165 IPR023554 ATP-dependent RNA helicase RhlB type YPTB0165 IPR014014 RNA helicase, DEAD-box type, Q motif YPTB0166 IPR036249 Thioredoxin-like superfamily YPTB0166 IPR017937 Thioredoxin, conserved site YPTB0166 IPR013766 Thioredoxin domain YPTB0166 IPR005746 Thioredoxin YPTB0167 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB0167 IPR004665 Transcription termination factor Rho YPTB0167 IPR011113 Rho termination factor, RNA-binding domain YPTB0167 IPR036269 Rho termination factor, N-terminal domain superfamily YPTB0167 IPR011112 Rho termination factor, N-terminal YPTB0167 IPR041703 Transcription termination factor Rho, ATP binding domain YPTB0167 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0167 IPR012340 Nucleic acid-binding, OB-fold YPTB0167 IPR011129 Cold shock domain YPTB0167 IPR003593 AAA+ ATPase domain YPTB0168 IPR000715 Glycosyl transferase, family 4 YPTB0168 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPTB0169 IPR032895 ECA polysaccharide chain length modulation protein WzzE YPTB0169 IPR003856 Polysaccharide chain length determinant N-terminal domain YPTB0170 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPTB0170 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB YPTB0170 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like YPTB0171 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC YPTB0171 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0171 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPTB0171 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPTB0171 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPTB0171 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPTB0171 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPTB0171 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPTB0171 IPR036291 NAD(P)-binding domain superfamily YPTB0172 IPR005888 dTDP-glucose 4,6-dehydratase YPTB0172 IPR016040 NAD(P)-binding domain YPTB0172 IPR036291 NAD(P)-binding domain superfamily YPTB0173 IPR029044 Nucleotide-diphospho-sugar transferases YPTB0173 IPR005835 Nucleotidyl transferase domain YPTB0173 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPTB0174 IPR000182 GNAT domain YPTB0174 IPR012752 dTDP-fucosamine acetyltransferase WecD YPTB0174 IPR016181 Acyl-CoA N-acyltransferase YPTB0174 IPR002110 Ankyrin repeat YPTB0174 IPR020683 Ankyrin repeat-containing domain YPTB0175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0175 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0175 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE YPTB0175 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like YPTB0175 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB0176 IPR032896 Lipid III flippase WzxE YPTB0176 IPR002797 Polysaccharide biosynthesis protein YPTB0177 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase YPTB0178 IPR010691 Probable ECA polymerase WzyE YPTB0179 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPTB0179 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPTB0180 IPR004841 Amino acid permease/ SLC12A domain YPTB0180 IPR004840 Amino acid permease, conserved site YPTB0181 IPR013026 Tetratricopeptide repeat-containing domain YPTB0181 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB0181 IPR005254 Heme biosynthesis-associated TPR protein YPTB0181 IPR010817 HemY, N-terminal YPTB0181 IPR019734 Tetratricopeptide repeat YPTB0181 IPR013105 Tetratricopeptide repeat 2 YPTB0182 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPTB0183 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPTB0183 IPR039793 Uroporphyrinogen-III synthase YPTB0183 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily YPTB0184 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPTB0184 IPR000860 Porphobilinogen deaminase YPTB0184 IPR022418 Porphobilinogen deaminase, C-terminal YPTB0184 IPR022417 Porphobilinogen deaminase, N-terminal YPTB0184 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily YPTB0185 IPR024685 Adenylate cyclase class-I, N-terminal domain YPTB0185 IPR024686 Adenylate cyclase class-I, conserved site YPTB0185 IPR000274 Adenylate cyclase, class-I YPTB0186 IPR001207 Transposase, mutator type YPTB0188 IPR020895 Frataxin conserved site YPTB0188 IPR002908 Frataxin/CyaY YPTB0188 IPR036524 Frataxin/CyaY superfamily YPTB0189 IPR032831 Prokaryotic lipoprotein-attachment site YPTB0190 IPR018510 Diaminopimelate epimerase, active site YPTB0190 IPR001653 Diaminopimelate epimerase, DapF YPTB0191 IPR029016 GAF-like domain superfamily YPTB0191 IPR007435 Protein of unknown function DUF484 YPTB0192 IPR013762 Integrase-like, catalytic domain superfamily YPTB0192 IPR023009 Tyrosine recombinase XerC/XerD YPTB0192 IPR011931 Tyrosine recombinase XerC YPTB0192 IPR004107 Integrase, SAM-like, N-terminal YPTB0192 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB0192 IPR010998 Integrase/recombinase, N-terminal YPTB0192 IPR002104 Integrase, catalytic domain YPTB0193 IPR023214 HAD superfamily YPTB0193 IPR041492 Haloacid dehalogenase-like hydrolase YPTB0193 IPR006439 HAD hydrolase, subfamily IA YPTB0193 IPR036412 HAD-like superfamily YPTB0194 IPR034739 UvrD/AddA helicase, N-terminal YPTB0194 IPR014016 UvrD-like helicase, ATP-binding domain YPTB0194 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0194 IPR000212 DNA helicase, UvrD/REP type YPTB0194 IPR014017 UvrD-like DNA helicase, C-terminal YPTB0194 IPR005753 DNA helicase, ATP-dependent, UvrD type YPTB0194 IPR013986 DExx box DNA helicase domain superfamily YPTB0196 IPR008322 Uncharacterised protein family UPF0261 YPTB0197 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB0197 IPR009215 TIM-barrel domain, IGPS-like YPTB0197 IPR013785 Aldolase-type TIM barrel YPTB0198 IPR004488 Magnesium/cobalt transport protein CorA YPTB0198 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPTB0199 IPR000620 EamA domain YPTB0199 IPR004626 RarD protein YPTB0200 IPR006683 Thioesterase domain YPTB0200 IPR029069 HotDog domain superfamily YPTB0200 IPR003736 Phenylacetic acid degradation-related domain YPTB0201 IPR003187 Phospholipase A1 YPTB0201 IPR036541 Phospholipase A1 superfamily YPTB0202 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPTB0202 IPR018982 RQC domain YPTB0202 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0202 IPR002121 HRDC domain YPTB0202 IPR010997 HRDC-like superfamily YPTB0202 IPR001650 Helicase, C-terminal YPTB0202 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0202 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPTB0202 IPR004589 DNA helicase, ATP-dependent, RecQ type YPTB0202 IPR011545 DEAD/DEAH box helicase domain YPTB0202 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0203 IPR001123 Amino acid exporter protein, LeuE-type YPTB0203 IPR004778 Homoserine/Threonine efflux protein YPTB0204 IPR004778 Homoserine/Threonine efflux protein YPTB0204 IPR001123 Amino acid exporter protein, LeuE-type YPTB0205 IPR029058 Alpha/Beta hydrolase fold YPTB0205 IPR022742 Serine aminopeptidase, S33 YPTB0206 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTB0206 IPR036412 HAD-like superfamily YPTB0206 IPR000150 Cof family YPTB0206 IPR023214 HAD superfamily YPTB0208 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTB0208 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTB0209 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0209 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB0209 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTB0209 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPTB0209 IPR006076 FAD dependent oxidoreductase YPTB0209 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPTB0210 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPTB0210 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB0210 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0211 IPR009051 Alpha-helical ferredoxin YPTB0211 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0211 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPTB0211 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0211 IPR004017 Cysteine-rich domain YPTB0212 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTB0212 IPR014894 Protein DcrB YPTB0213 IPR003744 Queuosine precursor transporter YPTB0214 IPR022931 Sulfur carrier protein TusA YPTB0214 IPR036868 TusA-like domain superfamily YPTB0214 IPR001455 TusA-like domain YPTB0215 IPR001757 P-type ATPase YPTB0215 IPR027256 P-type ATPase, subfamily IB YPTB0215 IPR036163 Heavy metal-associated domain superfamily YPTB0215 IPR006121 Heavy metal-associated domain, HMA YPTB0215 IPR017969 Heavy-metal-associated, conserved site YPTB0215 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB0215 IPR008250 P-type ATPase, A domain superfamily YPTB0215 IPR023299 P-type ATPase, cytoplasmic domain N YPTB0215 IPR018303 P-type ATPase, phosphorylation site YPTB0215 IPR036412 HAD-like superfamily YPTB0215 IPR023214 HAD superfamily YPTB0216 IPR012506 YhhN-like YPTB0219 IPR009525 Protein of unknown function DUF1145 YPTB0220 IPR004398 RNA methyltransferase, RsmD YPTB0220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0220 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB0221 IPR003593 AAA+ ATPase domain YPTB0221 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0221 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTB0221 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTB0221 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTB0221 IPR036225 SRP/SRP receptor, N-terminal YPTB0221 IPR004390 Signal-recognition particle receptor FtsY YPTB0221 IPR013822 Signal recognition particle SRP54, helical bundle YPTB0221 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0221 IPR003593 AAA+ ATPase domain YPTB0221 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTB0221 IPR036225 SRP/SRP receptor, N-terminal YPTB0221 IPR013822 Signal recognition particle SRP54, helical bundle YPTB0221 IPR004390 Signal-recognition particle receptor FtsY YPTB0222 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0222 IPR005286 Cell division protein FtsE, ATP-binding YPTB0222 IPR017871 ABC transporter, conserved site YPTB0222 IPR003439 ABC transporter-like YPTB0222 IPR003593 AAA+ ATPase domain YPTB0223 IPR040690 FtsX, extracellular domain YPTB0223 IPR003838 ABC transporter permease protein domain YPTB0223 IPR004513 Cell division protein FtsX YPTB0224 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPTB0224 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0224 IPR014284 RNA polymerase sigma-70 like domain YPTB0224 IPR000943 RNA polymerase sigma-70 YPTB0224 IPR009042 RNA polymerase sigma-70 region 1.2 YPTB0224 IPR007627 RNA polymerase sigma-70 region 2 YPTB0224 IPR007630 RNA polymerase sigma-70 region 4 YPTB0224 IPR013325 RNA polymerase sigma factor, region 2 YPTB0224 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB0225 IPR040448 PanZ, acetyltransferase (GNAT) domain YPTB0225 IPR032900 PanD regulatory factor PanZ YPTB0225 IPR000182 GNAT domain YPTB0225 IPR016181 Acyl-CoA N-acyltransferase YPTB0226 IPR000709 Leu/Ile/Val-binding protein YPTB0226 IPR028082 Periplasmic binding protein-like I YPTB0226 IPR028081 Leucine-binding protein domain YPTB0227 IPR001851 ABC transporter, permease YPTB0228 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPTB0228 IPR001851 ABC transporter, permease YPTB0229 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTB0229 IPR017871 ABC transporter, conserved site YPTB0229 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0229 IPR003439 ABC transporter-like YPTB0229 IPR003593 AAA+ ATPase domain YPTB0230 IPR003593 AAA+ ATPase domain YPTB0230 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPTB0230 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0230 IPR017871 ABC transporter, conserved site YPTB0230 IPR003439 ABC transporter-like YPTB0238 IPR006061 Solute-binding family 1, conserved site YPTB0238 IPR006059 Bacterial extracellular solute-binding protein YPTB0239 IPR035906 MetI-like superfamily YPTB0239 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0240 IPR035906 MetI-like superfamily YPTB0240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0240 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE YPTB0241 IPR003439 ABC transporter-like YPTB0241 IPR003593 AAA+ ATPase domain YPTB0241 IPR017871 ABC transporter, conserved site YPTB0241 IPR040582 MalK, OB fold domain YPTB0241 IPR008995 Molybdate/tungstate binding, C-terminal YPTB0241 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0241 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC YPTB0242 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTB0242 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTB0243 IPR004776 Membrane transport protein YPTB0246 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPTB0246 IPR000620 EamA domain YPTB0247 IPR036390 Winged helix DNA-binding domain superfamily YPTB0247 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0247 IPR000847 Transcription regulator HTH, LysR YPTB0247 IPR005119 LysR, substrate-binding YPTB0247 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain YPTB0248 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPTB0248 IPR006276 Cobalamin-independent methionine synthase YPTB0248 IPR038071 UROD/MetE-like superfamily YPTB0248 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPTB0249 IPR029058 Alpha/Beta hydrolase fold YPTB0249 IPR002925 Dienelactone hydrolase YPTB0250 IPR018016 Nucleoside phosphorylase, conserved site YPTB0250 IPR000845 Nucleoside phosphorylase domain YPTB0250 IPR035994 Nucleoside phosphorylase superfamily YPTB0250 IPR010058 Uridine phosphorylase YPTB0252 IPR003706 CstA, N-terminal domain YPTB0252 IPR025299 CstA, C-terminal domain YPTB0253 IPR032818 DedA family YPTB0253 IPR032816 SNARE associated Golgi protein YPTB0254 IPR003798 DNA recombination RmuC YPTB0255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0255 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPTB0255 IPR004033 UbiE/COQ5 methyltransferase YPTB0256 IPR038989 Ubiquinone biosynthesis protein UbiJ YPTB0256 IPR036527 SCP2 sterol-binding domain superfamily YPTB0256 IPR003033 SCP2 sterol-binding domain YPTB0257 IPR004147 UbiB domain YPTB0257 IPR010232 Probable protein kinase UbiB YPTB0257 IPR011009 Protein kinase-like domain superfamily YPTB0258 IPR006312 Sec-independent protein translocase protein TatA/E YPTB0258 IPR003369 Sec-independent protein translocase protein TatA/B/E YPTB0259 IPR018448 Twin-arginine translocation protein TatB YPTB0260 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPTB0260 IPR002033 Sec-independent periplasmic protein translocase TatC YPTB0261 IPR032466 Metal-dependent hydrolase YPTB0261 IPR024918 3'-5' ssDNA/RNA exonuclease TatD YPTB0261 IPR001130 TatD family YPTB0261 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTB0262 IPR013785 Aldolase-type TIM barrel YPTB0262 IPR030656 Delta-aminolevulinic acid dehydratase, active site YPTB0262 IPR001731 Delta-aminolevulinic acid dehydratase YPTB0263 IPR006645 NusG, N-terminal YPTB0263 IPR036735 NusG, N-terminal domain superfamily YPTB0263 IPR010215 Transcription antitermination protein RfaH YPTB0264 IPR002830 UbiD decarboxylyase family YPTB0264 IPR023677 UbiD decarboxylyase, bacteria YPTB0265 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB0265 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB0265 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB0265 IPR017938 Riboflavin synthase-like beta-barrel YPTB0265 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB0266 IPR020617 Thiolase, C-terminal YPTB0266 IPR020616 Thiolase, N-terminal YPTB0266 IPR020610 Thiolase, active site YPTB0266 IPR020613 Thiolase, conserved site YPTB0266 IPR016039 Thiolase-like YPTB0266 IPR020615 Thiolase, acyl-enzyme intermediate active site YPTB0266 IPR012805 Acetyl-CoA C-acyltransferase FadA YPTB0266 IPR002155 Thiolase YPTB0267 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0267 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTB0267 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPTB0267 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPTB0267 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPTB0267 IPR001753 Enoyl-CoA hydratase/isomerase YPTB0267 IPR012799 Fatty oxidation complex, alpha subunit FadB YPTB0267 IPR029045 ClpP/crotonase-like domain superfamily YPTB0267 IPR036291 NAD(P)-binding domain superfamily YPTB0268 IPR022846 Xaa-Pro dipeptidase YPTB0268 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB0268 IPR036005 Creatinase/aminopeptidase-like YPTB0268 IPR000994 Peptidase M24 YPTB0268 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTB0269 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0269 IPR035647 EF-G domain III/V-like YPTB0269 IPR023582 Impact family YPTB0269 IPR015796 Impact family, bacterial/archaeal YPTB0269 IPR001498 Impact, N-terminal YPTB0269 IPR036956 Impact, N-terminal domain superfamily YPTB0269 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPTB0269 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPTB0270 IPR003445 Cation transporter YPTB0270 IPR004772 TrkH potassium transport family YPTB0271 IPR008254 Flavodoxin/nitric oxide synthase YPTB0271 IPR001226 Flavodoxin, conserved site YPTB0271 IPR029039 Flavoprotein-like superfamily YPTB0271 IPR026816 Flavodoxin domain YPTB0272 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPTB0272 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB0272 IPR036318 FAD-binding, type PCMH-like superfamily YPTB0272 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTB0272 IPR006094 FAD linked oxidase, N-terminal YPTB0272 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPTB0272 IPR016166 FAD-binding domain, PCMH-type YPTB0272 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily YPTB0273 IPR030855 Bifunctional ligase/repressor BirA YPTB0273 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPTB0273 IPR004409 Biotin operon repressor, helix-turn-helix domain YPTB0273 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTB0273 IPR003142 Biotin protein ligase, C-terminal YPTB0273 IPR013196 Helix-turn-helix, type 11 YPTB0273 IPR008988 Transcriptional repressor, C-terminal YPTB0273 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0273 IPR036390 Winged helix DNA-binding domain superfamily YPTB0274 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0274 IPR006083 Phosphoribulokinase/uridine kinase YPTB0274 IPR004566 Pantothenate kinase YPTB0275 IPR000182 GNAT domain YPTB0275 IPR016181 Acyl-CoA N-acyltransferase YPTB0276 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPTB0276 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB0276 IPR005225 Small GTP-binding protein domain YPTB0276 IPR031157 Tr-type G domain, conserved site YPTB0276 IPR033720 Elongation factor Tu, domain 2 YPTB0276 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPTB0276 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB0276 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0276 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTB0276 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0276 IPR000795 Transcription factor, GTP-binding domain YPTB0277 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPTB0277 IPR005807 SecE subunit of protein translocation complex, bacterial-like YPTB0277 IPR038379 SecE superfamily YPTB0278 IPR006645 NusG, N-terminal YPTB0278 IPR036735 NusG, N-terminal domain superfamily YPTB0278 IPR008991 Translation protein SH3-like domain superfamily YPTB0278 IPR014722 Ribosomal protein L2, domain 2 YPTB0278 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPTB0278 IPR005824 KOW YPTB0278 IPR001062 Transcription antitermination protein, NusG YPTB0279 IPR020784 Ribosomal protein L11, N-terminal YPTB0279 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YPTB0279 IPR000911 Ribosomal protein L11/L12 YPTB0279 IPR020783 Ribosomal protein L11, C-terminal YPTB0279 IPR006519 Ribosomal protein L11, bacterial-type YPTB0279 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YPTB0279 IPR020785 Ribosomal protein L11, conserved site YPTB0280 IPR005878 Ribosomal protein L1, bacterial-type YPTB0280 IPR023674 Ribosomal protein L1-like YPTB0280 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPTB0280 IPR002143 Ribosomal protein L1 YPTB0280 IPR023673 Ribosomal protein L1, conserved site YPTB0280 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPTB0281 IPR022973 Ribosomal protein L10 YPTB0281 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPTB0281 IPR001790 Ribosomal protein L10P YPTB0282 IPR013823 Ribosomal protein L7/L12, C-terminal YPTB0282 IPR000206 Ribosomal protein L7/L12 YPTB0282 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB0282 IPR008932 Ribosomal protein L7/L12, oligomerisation YPTB0282 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily YPTB0283 IPR007642 RNA polymerase Rpb2, domain 2 YPTB0283 IPR037034 RNA polymerase Rpb2, domain 2 superfamily YPTB0283 IPR007645 RNA polymerase Rpb2, domain 3 YPTB0283 IPR007641 RNA polymerase Rpb2, domain 7 YPTB0283 IPR007644 RNA polymerase, beta subunit, protrusion YPTB0283 IPR014724 RNA polymerase Rpb2, OB-fold YPTB0283 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type YPTB0283 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily YPTB0283 IPR007121 RNA polymerase, beta subunit, conserved site YPTB0283 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPTB0283 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain YPTB0283 IPR015712 DNA-directed RNA polymerase, subunit 2 YPTB0284 IPR000722 RNA polymerase, alpha subunit YPTB0284 IPR007081 RNA polymerase Rpb1, domain 5 YPTB0284 IPR006592 RNA polymerase, N-terminal YPTB0284 IPR038120 RNA polymerase Rpb1, funnel domain superfamily YPTB0284 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPTB0284 IPR007066 RNA polymerase Rpb1, domain 3 YPTB0284 IPR007080 RNA polymerase Rpb1, domain 1 YPTB0284 IPR042102 RNA polymerase Rpb1, domain 3 superfamily YPTB0284 IPR007083 RNA polymerase Rpb1, domain 4 YPTB0285 IPR034428 ThiH/NocL/HydG-like YPTB0285 IPR010722 Biotin and thiamin synthesis-associated domain YPTB0285 IPR007197 Radical SAM YPTB0285 IPR013785 Aldolase-type TIM barrel YPTB0285 IPR012726 Thiazole biosynthesis ThiH YPTB0286 IPR008867 Thiazole synthase YPTB0286 IPR033983 Thiazole synthase ThiG YPTB0286 IPR013785 Aldolase-type TIM barrel YPTB0288 IPR000594 THIF-type NAD/FAD binding fold YPTB0288 IPR035985 Ubiquitin-activating enzyme YPTB0288 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF YPTB0289 IPR034291 Thiamine phosphate synthase YPTB0289 IPR013785 Aldolase-type TIM barrel YPTB0289 IPR022998 Thiamine phosphate synthase/TenI YPTB0289 IPR036206 Thiamin phosphate synthase superfamily YPTB0290 IPR025747 ThiC-associated domain YPTB0290 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B YPTB0290 IPR038521 ThiC/Bza superfamily YPTB0290 IPR037509 Phosphomethylpyrimidine synthase YPTB0291 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPTB0291 IPR038309 Rsd/AlgQ superfamily YPTB0291 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPTB0292 IPR015797 NUDIX hydrolase-like domain superfamily YPTB0292 IPR020084 NUDIX hydrolase, conserved site YPTB0292 IPR000086 NUDIX hydrolase domain YPTB0292 IPR015376 Zinc ribbon, NADH pyrophosphatase YPTB0292 IPR022925 NADH pyrophosphatase NudC YPTB0294 IPR038071 UROD/MetE-like superfamily YPTB0294 IPR006361 Uroporphyrinogen decarboxylase HemE YPTB0294 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPTB0295 IPR007581 Endonuclease V YPTB0296 IPR023381 YP001051499.1-like domain superfamily YPTB0296 IPR007338 Protein of unknown function DUF416 YPTB0297 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTB0297 IPR020816 Histone-like DNA-binding protein, conserved site YPTB0297 IPR000119 Histone-like DNA-binding protein YPTB0298 IPR010858 Protein of unknown function DUF1481 YPTB0298 IPR016500 Uncharacterised conserved protein UCP006993 YPTB0299 IPR013815 ATP-grasp fold, subdomain 1 YPTB0299 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPTB0299 IPR000115 Phosphoribosylglycinamide synthetase YPTB0299 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPTB0299 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily YPTB0299 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPTB0299 IPR011054 Rudiment single hybrid motif YPTB0299 IPR011761 ATP-grasp fold YPTB0299 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPTB0299 IPR016185 Pre-ATP-grasp domain superfamily YPTB0300 IPR002695 Bifunctional purine biosynthesis protein PurH-like YPTB0300 IPR011607 Methylglyoxal synthase-like domain YPTB0300 IPR036914 Methylglyoxal synthase-like domain superfamily YPTB0300 IPR024051 AICAR transformylase, duplicated domain superfamily YPTB0300 IPR016193 Cytidine deaminase-like YPTB0301 IPR009057 Homeobox-like domain superfamily YPTB0301 IPR002514 Transposase IS3/IS911family YPTB0302 IPR012337 Ribonuclease H-like superfamily YPTB0302 IPR025948 HTH-like domain YPTB0302 IPR001584 Integrase, catalytic core YPTB0302 IPR036397 Ribonuclease H superfamily YPTB0303 IPR001270 ClpA/B family YPTB0303 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB0303 IPR003593 AAA+ ATPase domain YPTB0303 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0303 IPR002611 IstB-like ATP-binding protein YPTB0304 IPR036397 Ribonuclease H superfamily YPTB0304 IPR001584 Integrase, catalytic core YPTB0304 IPR006120 Resolvase, HTH domain YPTB0304 IPR012337 Ribonuclease H-like superfamily YPTB0304 IPR017894 HTH domain, IS21 transposase-type YPTB0306 IPR018212 Sodium/solute symporter, conserved site YPTB0306 IPR001734 Sodium/solute symporter YPTB0306 IPR038377 Sodium/glucose symporter superfamily YPTB0306 IPR014083 Cation/acetate symporter ActP YPTB0307 IPR007436 Protein of unknown function DUF485 YPTB0308 IPR011904 Acetate-CoA ligase YPTB0308 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain YPTB0308 IPR025110 AMP-binding enzyme, C-terminal domain YPTB0308 IPR020845 AMP-binding, conserved site YPTB0308 IPR000873 AMP-dependent synthetase/ligase YPTB0308 IPR042099 AMP-dependent synthetase-like superfamily YPTB0309 IPR034703 Proton/glutamate-aspartate symporter GltP YPTB0309 IPR033380 Glutamate-aspartate symport protein GltP/GltT YPTB0309 IPR001991 Sodium:dicarboxylate symporter YPTB0309 IPR018107 Sodium:dicarboxylate symporter, conserved site YPTB0309 IPR036458 Sodium:dicarboxylate symporter superfamily YPTB0310 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0310 IPR016032 Signal transduction response regulator, C-terminal effector YPTB0310 IPR001789 Signal transduction response regulator, receiver domain YPTB0310 IPR011006 CheY-like superfamily YPTB0310 IPR000792 Transcription regulator LuxR, C-terminal YPTB0311 IPR005467 Histidine kinase domain YPTB0311 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0311 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0311 IPR036641 HPT domain superfamily YPTB0311 IPR003660 HAMP domain YPTB0311 IPR001789 Signal transduction response regulator, receiver domain YPTB0311 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0311 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0311 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB0311 IPR019247 Histidine kinase BarA, N-terminal YPTB0311 IPR011006 CheY-like superfamily YPTB0311 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0315 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like YPTB0315 IPR009057 Homeobox-like domain superfamily YPTB0315 IPR018060 DNA binding HTH domain, AraC-type YPTB0315 IPR018062 HTH domain AraC-type, conserved site YPTB0319 IPR006182 Secretory protein YscJ/FliF YPTB0319 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPTB0322 IPR025505 FHIPEP conserved site YPTB0322 IPR006302 Type III secretion protein HrcV YPTB0322 IPR001712 Type III secretion system FHIPEP YPTB0322 IPR042196 FHIPEP, domain 4 YPTB0322 IPR042193 FHIPEP, domain 3 YPTB0323 IPR003593 AAA+ ATPase domain YPTB0323 IPR005714 ATPase, type III secretion system, FliI/YscN YPTB0323 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB0323 IPR013380 ATPase, type III secretion system, H+-transporting YPTB0323 IPR040627 T3SS EscN ATPase, C-terminal YPTB0323 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0326 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTB0326 IPR001543 Surface presentation of antigen (SpoA) YPTB0326 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPTB0326 IPR036429 SpoA-like superfamily YPTB0327 IPR005838 Type III secretion system inner membrane P protein YPTB0327 IPR005773 Yop virulence translocation protein R YPTB0328 IPR006306 Type III secretion protein HrpO YPTB0328 IPR002191 Bacterial export protein family 3 YPTB0329 IPR002010 Type III secretion system inner membrane R protein YPTB0329 IPR006304 Type III secretion protein SpaR/YscT YPTB0330 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB0330 IPR006135 Type III secretion system substrate exporter YPTB0330 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPTB0331 IPR007272 Sulphur transport domain YPTB0332 IPR001455 TusA-like domain YPTB0332 IPR036868 TusA-like domain superfamily YPTB0333 IPR036390 Winged helix DNA-binding domain superfamily YPTB0333 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0333 IPR000847 Transcription regulator HTH, LysR YPTB0333 IPR005119 LysR, substrate-binding YPTB0334 IPR018227 Amino acid/polyamine transporter 2 YPTB0335 IPR006233 Cystathionine beta-lyase, bacterial YPTB0335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0335 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0335 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTB0336 IPR017871 ABC transporter, conserved site YPTB0336 IPR003593 AAA+ ATPase domain YPTB0336 IPR015863 ABC transporter, hemin import, HmuV YPTB0336 IPR003439 ABC transporter-like YPTB0336 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0337 IPR037294 ABC transporter, BtuC-like YPTB0337 IPR000522 ABC transporter, permease protein, BtuC-like YPTB0338 IPR002491 ABC transporter periplasmic binding domain YPTB0339 IPR007845 Haemin-degrading HemS/ChuX domain YPTB0340 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPTB0340 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB0340 IPR010916 TonB box, conserved site YPTB0340 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB0340 IPR011276 TonB-dependent haem/haemoglobin receptor YPTB0340 IPR012910 TonB-dependent receptor, plug domain YPTB0340 IPR039426 Vitamin B12 transporter BtuB-like YPTB0340 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB0341 IPR019600 Hemin uptake protein HemP YPTB0342 IPR016040 NAD(P)-binding domain YPTB0342 IPR036291 NAD(P)-binding domain superfamily YPTB0343 IPR010413 Intracellular heme transport protein HutX-like YPTB0344 IPR023404 Radical SAM, alpha/beta horseshoe YPTB0344 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTB0344 IPR007197 Radical SAM YPTB0344 IPR026332 Anaerobilin synthase HutW YPTB0344 IPR006638 Elp3/MiaB/NifB YPTB0346 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPTB0348 IPR011215 Phosphoribosyl transferase YPTB0348 IPR028157 PELOTA RNA-binding domain YPTB0352 IPR003325 TerD domain YPTB0353 IPR017115 Tellurite resistance, TerA YPTB0353 IPR003325 TerD domain YPTB0354 IPR007791 Co-chaperone DjlA, N-terminal YPTB0354 IPR029024 TerB-like YPTB0355 IPR005496 Integral membrane protein TerC YPTB0355 IPR022369 Integral membrane protein TerC, riboswitch-linked YPTB0356 IPR003325 TerD domain YPTB0357 IPR003325 TerD domain YPTB0359 IPR042186 Outer membrane usher protein FimD, plug domain YPTB0359 IPR037224 PapC, N-terminal domain superfamily YPTB0359 IPR025885 PapC, N-terminal domain YPTB0359 IPR025949 PapC-like, C-terminal domain YPTB0359 IPR000015 Outer membrane usher protein YPTB0360 IPR016147 Pili assembly chaperone, N-terminal YPTB0360 IPR008962 PapD-like superfamily YPTB0360 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB0360 IPR013783 Immunoglobulin-like fold YPTB0364 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB0364 IPR006094 FAD linked oxidase, N-terminal YPTB0364 IPR036318 FAD-binding, type PCMH-like superfamily YPTB0364 IPR012951 Berberine/berberine-like YPTB0364 IPR016166 FAD-binding domain, PCMH-type YPTB0365 IPR006315 Outer membrane autotransporter barrel YPTB0365 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB0365 IPR013425 Autotransporter-associated beta strand repeat YPTB0365 IPR005546 Autotransporter beta-domain YPTB0365 IPR011050 Pectin lyase fold/virulence factor YPTB0365 IPR036709 Autotransporter beta-domain superfamily YPTB0366 IPR007440 Chorismate--pyruvate lyase YPTB0366 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTB0367 IPR030470 UbiA prenyltransferase conserved site YPTB0367 IPR006370 4-hydroxybenzoate polyprenyltransferase-like YPTB0367 IPR039653 Prenyltransferase YPTB0367 IPR000537 UbiA prenyltransferase family YPTB0368 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPTB0368 IPR041728 GPAT/DHAPAT, acyltransferase domain YPTB0368 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPTB0368 IPR002123 Phospholipid/glycerol acyltransferase YPTB0369 IPR000829 DAGK family YPTB0369 IPR033718 Diacylglycerol kinase, prokaryotic YPTB0369 IPR036945 Diacylglycerol kinase (DAGK) superfamily YPTB0370 IPR036390 Winged helix DNA-binding domain superfamily YPTB0370 IPR006200 Transcription regulator LexA YPTB0370 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0370 IPR006199 LexA repressor, DNA-binding domain YPTB0370 IPR036286 LexA/Signal peptidase-like superfamily YPTB0370 IPR039418 LexA-like YPTB0370 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB0370 IPR006197 Peptidase S24, LexA-like YPTB0371 IPR036390 Winged helix DNA-binding domain superfamily YPTB0371 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0371 IPR002481 Ferric-uptake regulator YPTB0372 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTB0372 IPR013785 Aldolase-type TIM barrel YPTB0372 IPR004653 tRNA-dihydrouridine(20/20a) synthase YPTB0372 IPR001269 tRNA-dihydrouridine synthase YPTB0372 IPR035587 DUS-like, FMN-binding domain YPTB0373 IPR014318 Phage shock protein, PspG YPTB0374 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPTB0374 IPR020843 Polyketide synthase, enoylreductase domain YPTB0374 IPR036291 NAD(P)-binding domain superfamily YPTB0374 IPR011032 GroES-like superfamily YPTB0374 IPR013149 Alcohol dehydrogenase, C-terminal YPTB0374 IPR013154 Alcohol dehydrogenase, N-terminal YPTB0375 IPR007693 DNA helicase, DnaB-like, N-terminal YPTB0375 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTB0375 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0375 IPR007692 DNA helicase, DnaB type YPTB0375 IPR007694 DNA helicase, DnaB-like, C-terminal YPTB0375 IPR003593 AAA+ ATPase domain YPTB0375 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily YPTB0376 IPR029066 PLP-binding barrel YPTB0376 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPTB0376 IPR001608 Alanine racemase, N-terminal YPTB0376 IPR011079 Alanine racemase, C-terminal YPTB0376 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTB0376 IPR000821 Alanine racemase YPTB0377 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPTB0377 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0377 IPR000796 Aspartate/other aminotransferase YPTB0377 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0377 IPR004839 Aminotransferase, class I/classII YPTB0377 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0378 IPR007351 Uncharacterised protein YjbR YPTB0378 IPR038056 YjbR-like superfamily YPTB0379 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0379 IPR041552 UvrA DNA-binding domain YPTB0379 IPR041102 UvrA, interaction domain YPTB0379 IPR017871 ABC transporter, conserved site YPTB0379 IPR003439 ABC transporter-like YPTB0379 IPR004602 UvrABC system subunit A YPTB0380 IPR000424 Primosome PriB/single-strand DNA-binding YPTB0380 IPR012340 Nucleic acid-binding, OB-fold YPTB0380 IPR011344 Single-stranded DNA-binding protein YPTB0381 IPR013448 L-rhamnose mutarotase YPTB0381 IPR011008 Dimeric alpha-beta barrel YPTB0381 IPR008000 Rhamnose/fucose mutarotase YPTB0382 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTB0382 IPR039697 Iron-type alcohol dehydrogenase-like YPTB0382 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTB0383 IPR013447 Rhamnulose-1-phosphate aldolase YPTB0383 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTB0383 IPR001303 Class II aldolase/adducin N-terminal YPTB0384 IPR009308 Rhamnose isomerase YPTB0384 IPR036237 Xylose isomerase-like superfamily YPTB0385 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB0385 IPR000577 Carbohydrate kinase, FGGY YPTB0385 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB0385 IPR013449 Rhamnulokinase YPTB0386 IPR023609 Transcription regulator HTH, RhaS YPTB0386 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTB0386 IPR018060 DNA binding HTH domain, AraC-type YPTB0386 IPR018062 HTH domain AraC-type, conserved site YPTB0386 IPR037923 Transcription regulator HTH-like YPTB0386 IPR009057 Homeobox-like domain superfamily YPTB0386 IPR020449 Transcription regulator HTH, AraC- type YPTB0386 IPR014710 RmlC-like jelly roll fold YPTB0387 IPR018060 DNA binding HTH domain, AraC-type YPTB0387 IPR018062 HTH domain AraC-type, conserved site YPTB0387 IPR014710 RmlC-like jelly roll fold YPTB0387 IPR020449 Transcription regulator HTH, AraC- type YPTB0387 IPR009057 Homeobox-like domain superfamily YPTB0387 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTB0387 IPR023699 Transcription activator HTH, RhaR YPTB0387 IPR011051 RmlC-like cupin domain superfamily YPTB0388 IPR004673 L-rhamnose-proton symport, RhaT YPTB0391 IPR008992 Enterotoxin YPTB0395 IPR009057 Homeobox-like domain superfamily YPTB0395 IPR001647 DNA-binding HTH domain, TetR-type YPTB0395 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB0396 IPR028261 Dihydroprymidine dehydrogenase domain II YPTB0396 IPR023753 FAD/NAD(P)-binding domain YPTB0396 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0396 IPR009051 Alpha-helical ferredoxin YPTB0396 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0396 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0396 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPTB0397 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0397 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0398 IPR006657 Molybdopterin dinucleotide-binding domain YPTB0398 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB0398 IPR006478 Formate dehydrogenase, alpha subunit YPTB0398 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain YPTB0398 IPR041924 Formate dehydrogenase H, N-terminal YPTB0398 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTB0398 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTB0398 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTB0398 IPR006656 Molybdopterin oxidoreductase YPTB0399 IPR017937 Thioredoxin, conserved site YPTB0399 IPR036249 Thioredoxin-like superfamily YPTB0399 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YPTB0399 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPTB0399 IPR035671 DsbD gamma YPTB0399 IPR013766 Thioredoxin domain YPTB0399 IPR003834 Cytochrome C biogenesis protein, transmembrane domain YPTB0399 IPR022910 Thiol:disulphide interchange protein DsbD YPTB0400 IPR004323 Divalent ion tolerance protein, CutA YPTB0400 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria YPTB0400 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB0400 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB0401 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPTB0402 IPR000362 Fumarate lyase family YPTB0402 IPR022761 Fumarate lyase, N-terminal YPTB0402 IPR020557 Fumarate lyase, conserved site YPTB0402 IPR018951 Fumarase C, C-terminal YPTB0402 IPR024083 Fumarase/histidase, N-terminal YPTB0402 IPR008948 L-Aspartase-like YPTB0402 IPR004708 Aspartate ammonia-lyase YPTB0403 IPR007313 FxsA cytoplasmic membrane protein YPTB0404 IPR037124 GroES chaperonin superfamily YPTB0404 IPR018369 Chaperonin GroES, conserved site YPTB0404 IPR011032 GroES-like superfamily YPTB0404 IPR020818 GroES chaperonin family YPTB0405 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YPTB0405 IPR027409 GroEL-like apical domain superfamily YPTB0405 IPR001844 Chaperonin Cpn60 YPTB0405 IPR027413 GroEL-like equatorial domain superfamily YPTB0405 IPR002423 Chaperonin Cpn60/TCP-1 family YPTB0405 IPR018370 Chaperonin Cpn60, conserved site YPTB0406 IPR025294 Protein of unknown function DUF4156 YPTB0407 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPTB0407 IPR022462 Lysine-2,3-aminomutase-like YPTB0407 IPR013785 Aldolase-type TIM barrel YPTB0407 IPR007197 Radical SAM YPTB0408 IPR012340 Nucleic acid-binding, OB-fold YPTB0408 IPR015365 Elongation factor P, C-terminal YPTB0408 IPR014722 Ribosomal protein L2, domain 2 YPTB0408 IPR020599 Translation elongation factor P/YeiP YPTB0408 IPR011768 Translation elongation factor P YPTB0408 IPR008991 Translation protein SH3-like domain superfamily YPTB0408 IPR013852 Translation elongation factor P/YeiP, conserved site YPTB0408 IPR013185 Translation elongation factor, KOW-like YPTB0408 IPR001059 Translation elongation factor P/YeiP, central YPTB0409 IPR000390 Small multidrug resistance protein family YPTB0410 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTB0410 IPR003418 Fumarate reductase, subunit D YPTB0411 IPR003510 Fumarate reductase, subunit C YPTB0411 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTB0412 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPTB0412 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0412 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB0412 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPTB0412 IPR009051 Alpha-helical ferredoxin YPTB0412 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTB0412 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0412 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB0412 IPR012675 Beta-grasp domain superfamily YPTB0413 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB0413 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPTB0413 IPR005884 Fumarate reductase, flavoprotein subunit YPTB0413 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0413 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPTB0413 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTB0413 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTB0413 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTB0414 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB0414 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTB0414 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPTB0414 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPTB0415 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTB0415 IPR006685 Mechanosensitive ion channel MscS YPTB0415 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTB0415 IPR010920 LSM domain superfamily YPTB0415 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTB0415 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTB0415 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTB0415 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTB0416 IPR033177 Phosphatidylserine decarboxylase YPTB0416 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 YPTB0416 IPR003817 Phosphatidylserine decarboxylase-related YPTB0417 IPR004881 Ribosome biogenesis GTPase RsgA YPTB0417 IPR010914 RsgA GTPase domain YPTB0417 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain YPTB0417 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0418 IPR022894 Oligoribonuclease YPTB0418 IPR012337 Ribonuclease H-like superfamily YPTB0418 IPR036397 Ribonuclease H superfamily YPTB0418 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB0419 IPR004453 Epoxyqueuosine reductase QueG YPTB0419 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0419 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0419 IPR013542 Domain of unknown function DUF1730 YPTB0419 IPR009051 Alpha-helical ferredoxin YPTB0420 IPR017953 Carbohydrate kinase, predicted, conserved site YPTB0420 IPR036652 YjeF N-terminal domain superfamily YPTB0420 IPR029056 Ribokinase-like YPTB0420 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase YPTB0420 IPR004443 YjeF N-terminal domain YPTB0420 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr YPTB0421 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPTB0421 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0422 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPTB0423 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB0423 IPR014762 DNA mismatch repair, conserved site YPTB0423 IPR020667 DNA mismatch repair protein, MutL YPTB0423 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0423 IPR042121 MutL, C-terminal domain, regulatory subdomain YPTB0423 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0423 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPTB0423 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPTB0423 IPR037198 MutL, C-terminal domain superfamily YPTB0423 IPR014790 MutL, C-terminal, dimerisation YPTB0423 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPTB0423 IPR002099 DNA mismatch repair protein family, N-terminal YPTB0424 IPR039657 Dimethylallyltransferase YPTB0424 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0424 IPR018022 IPP transferase YPTB0425 IPR010920 LSM domain superfamily YPTB0425 IPR005001 RNA-binding protein Hfq YPTB0426 IPR035647 EF-G domain III/V-like YPTB0426 IPR030394 HflX-type guanine nucleotide-binding (G) domain YPTB0426 IPR006073 GTP binding domain YPTB0426 IPR016496 GTPase HflX YPTB0426 IPR025121 GTPase HflX, N-terminal YPTB0426 IPR042108 GTPase HflX, N-terminal domain superfamily YPTB0426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0426 IPR032305 GTP-binding protein, middle domain YPTB0427 IPR010201 HflK YPTB0427 IPR020980 Menbrane protein HflK, N-terminal YPTB0427 IPR001972 Stomatin family YPTB0427 IPR001107 Band 7 domain YPTB0427 IPR036013 Band 7/SPFH domain superfamily YPTB0428 IPR036013 Band 7/SPFH domain superfamily YPTB0428 IPR001107 Band 7 domain YPTB0428 IPR010200 HflC YPTB0429 IPR019201 Protein of unknown function DUF2065 YPTB0430 IPR042109 Adenylosuccinate synthetase, domain 1 YPTB0430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0430 IPR001114 Adenylosuccinate synthetase YPTB0430 IPR042111 Adenylosuccinate synthetase, domain 3 YPTB0430 IPR042110 Adenylosuccinate synthetase, domain 2 YPTB0430 IPR018220 Adenylosuccinate synthase, GTP-binding site YPTB0430 IPR033128 Adenylosuccinate synthase, active site YPTB0431 IPR030489 Transcription regulator Rrf2-type, conserved site YPTB0431 IPR023761 Transcriptional repressor HTH, NsrR YPTB0431 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0431 IPR036390 Winged helix DNA-binding domain superfamily YPTB0431 IPR000944 Transcription regulator Rrf2-type YPTB0432 IPR022967 RNA-binding domain, S1 YPTB0432 IPR003029 S1 domain YPTB0432 IPR011129 Cold shock domain YPTB0432 IPR040476 RNase II/RNase R, cold shock domain YPTB0432 IPR012340 Nucleic acid-binding, OB-fold YPTB0432 IPR013223 Ribonuclease B, N-terminal OB domain YPTB0432 IPR013668 Ribonuclease R winged-helix domain YPTB0432 IPR001900 Ribonuclease II/R YPTB0432 IPR022966 Ribonuclease II/R, conserved site YPTB0432 IPR004476 Ribonuclease II/ribonuclease R YPTB0432 IPR011805 Ribonuclease R YPTB0433 IPR004441 RNA methyltransferase TrmH family YPTB0433 IPR029064 50S ribosomal protein L30e-like YPTB0433 IPR029028 Alpha/beta knot methyltransferases YPTB0433 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB0433 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTB0433 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPTB0433 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPTB0434 IPR006089 Acyl-CoA dehydrogenase, conserved site YPTB0434 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPTB0434 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTB0434 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTB0434 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTB0434 IPR034184 Putative acyl-CoA dehydrogenase AidB YPTB0434 IPR041504 Adaptive response protein AidB, N-terminal YPTB0435 IPR025543 Dodecin-like YPTB0435 IPR010854 Domain of unknown function DUF1471 YPTB0435 IPR036275 YdgH-like superfamily YPTB0436 IPR029058 Alpha/Beta hydrolase fold YPTB0436 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPTB0438 IPR000529 Ribosomal protein S6 YPTB0438 IPR020814 Ribosomal protein S6, plastid/chloroplast YPTB0438 IPR020815 Ribosomal protein S6, conserved site YPTB0438 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPTB0438 IPR035980 Ribosomal protein S6 superfamily YPTB0439 IPR023646 Primosomal replication protein PriB YPTB0439 IPR012340 Nucleic acid-binding, OB-fold YPTB0439 IPR000424 Primosome PriB/single-strand DNA-binding YPTB0440 IPR001648 Ribosomal protein S18 YPTB0440 IPR018275 Ribosomal protein S18, conserved site YPTB0440 IPR036870 Ribosomal protein S18 superfamily YPTB0441 IPR020070 Ribosomal protein L9, N-terminal YPTB0441 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPTB0441 IPR000244 Ribosomal protein L9 YPTB0441 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YPTB0441 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPTB0441 IPR020069 Ribosomal protein L9, C-terminal YPTB0441 IPR036935 Ribosomal protein L9, N-terminal domain superfamily YPTB0443 IPR007340 Opacity-associated protein A YPTB0443 IPR013731 Opacity-associated protein A, N-terminal YPTB0444 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPTB0444 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTB0444 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPTB0445 IPR019903 Repair of iron centres family YPTB0445 IPR023742 Iron-sulfur cluster repair protein YftE YPTB0445 IPR012312 Haemerythrin-like YPTB0446 IPR029052 Metallo-dependent phosphatase-like YPTB0446 IPR006146 5'-Nucleotidase, conserved site YPTB0446 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPTB0446 IPR008334 5'-Nucleotidase, C-terminal YPTB0446 IPR041827 CpdB, N-terminal metallophosphatase domain YPTB0446 IPR006179 5'-Nucleotidase/apyrase YPTB0446 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPTB0446 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTB0447 IPR020583 Inositol monophosphatase, metal-binding site YPTB0447 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ YPTB0447 IPR020550 Inositol monophosphatase, conserved site YPTB0447 IPR000760 Inositol monophosphatase-like YPTB0448 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPTB0449 IPR009491 Protein of unknown function DUF1107 YPTB0450 IPR002550 CNNM, transmembrane domain YPTB0450 IPR000644 CBS domain YPTB0450 IPR005170 Transporter-associated domain YPTB0450 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB0450 IPR036318 FAD-binding, type PCMH-like superfamily YPTB0451 IPR002569 Peptide methionine sulphoxide reductase MsrA YPTB0451 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily YPTB0452 IPR034746 POTRA domain YPTB0452 IPR039910 Surface antigen D15-like YPTB0452 IPR010827 POTRA domain, BamA/TamA-like YPTB0452 IPR035243 TamA, POTRA domain 1 YPTB0452 IPR000184 Bacterial surface antigen (D15) YPTB0453 IPR007452 Translocation and assembly module TamB YPTB0454 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily YPTB0454 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPTB0454 IPR039126 Gamma-glutamylaminecyclotransferase YPTB0454 IPR013024 Gamma-glutamyl cyclotransferase-like YPTB0455 IPR036649 Inorganic pyrophosphatase superfamily YPTB0455 IPR008162 Inorganic pyrophosphatase YPTB0456 IPR000146 Fructose-1,6-bisphosphatase class 1 YPTB0456 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal YPTB0456 IPR028343 Fructose-1,6-bisphosphatase YPTB0456 IPR020548 Fructose-1,6-bisphosphatase, active site YPTB0457 IPR005757 Murein peptide ligase YPTB0457 IPR036565 Mur-like, catalytic domain superfamily YPTB0457 IPR000713 Mur ligase, N-terminal catalytic domain YPTB0457 IPR004101 Mur ligase, C-terminal YPTB0457 IPR013221 Mur ligase, central YPTB0457 IPR036615 Mur ligase, C-terminal domain superfamily YPTB0459 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0459 IPR001669 Arginine repressor YPTB0459 IPR036251 Arginine repressor, C-terminal domain superfamily YPTB0459 IPR020900 Arginine repressor, DNA-binding domain YPTB0459 IPR036390 Winged helix DNA-binding domain superfamily YPTB0459 IPR020899 Arginine repressor, C-terminal YPTB0460 IPR022383 Lactate/malate dehydrogenase, C-terminal YPTB0460 IPR001236 Lactate/malate dehydrogenase, N-terminal YPTB0460 IPR001557 L-lactate/malate dehydrogenase YPTB0460 IPR001252 Malate dehydrogenase, active site YPTB0460 IPR023958 Malate dehydrogenase, type 1, bacterial YPTB0460 IPR010097 Malate dehydrogenase, type 1 YPTB0460 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPTB0460 IPR036291 NAD(P)-binding domain superfamily YPTB0461 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPTB0461 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB0463 IPR033749 Polyprenyl synthetase, conserved site YPTB0463 IPR000092 Polyprenyl synthetase YPTB0463 IPR008949 Isoprenoid synthase domain superfamily YPTB0464 IPR018258 Ribosomal protein L21, conserved site YPTB0464 IPR001787 Ribosomal protein L21 YPTB0464 IPR028909 Ribosomal protein L21-like YPTB0464 IPR036164 L21-like superfamily YPTB0465 IPR001684 Ribosomal protein L27 YPTB0465 IPR018261 Ribosomal protein L27, conserved site YPTB0466 IPR000620 EamA domain YPTB0467 IPR006169 GTP1/OBG domain YPTB0467 IPR006074 GTP1/OBG, conserved site YPTB0467 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPTB0467 IPR014100 GTP-binding protein Obg/CgtA YPTB0467 IPR035101 GTP-binding protein, Obg-type YPTB0467 IPR036726 GTP1/OBG domain superfamily YPTB0467 IPR006073 GTP binding domain YPTB0467 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0468 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0468 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0468 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0468 IPR005467 Histidine kinase domain YPTB0468 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0468 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0468 IPR003660 HAMP domain YPTB0469 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB0469 IPR001789 Signal transduction response regulator, receiver domain YPTB0469 IPR011006 CheY-like superfamily YPTB0469 IPR039420 Transcriptional regulatory protein WalR-like YPTB0469 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0470 IPR012338 Beta-lactamase/transpeptidase-like YPTB0470 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPTB0471 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPTB0471 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPTB0471 IPR023459 Transcription elongation factor GreA/GreB family YPTB0471 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTB0471 IPR028624 Transcription elongation factor GreA/GreB YPTB0471 IPR006359 Transcription elongation factor GreA YPTB0471 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPTB0471 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTB0472 IPR035920 YhbY-like superfamily YPTB0472 IPR001890 RNA-binding, CRM domain YPTB0472 IPR017924 RNA-binding protein YhbY YPTB0473 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0473 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPTB0473 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPTB0473 IPR015507 Ribosomal RNA large subunit methyltransferase E YPTB0474 IPR003593 AAA+ ATPase domain YPTB0474 IPR041569 AAA ATPase, AAA+ lid domain YPTB0474 IPR003959 ATPase, AAA-type, core YPTB0474 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0474 IPR005936 Peptidase, FtsH YPTB0474 IPR011546 Peptidase M41, FtsH extracellular YPTB0474 IPR000642 Peptidase M41 YPTB0474 IPR037219 Peptidase M41-like YPTB0474 IPR003960 ATPase, AAA-type, conserved site YPTB0475 IPR000489 Pterin-binding domain YPTB0475 IPR011005 Dihydropteroate synthase-like YPTB0475 IPR006390 Dihydropteroate synthase YPTB0476 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTB0476 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTB0476 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTB0476 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTB0476 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTB0476 IPR005841 Alpha-D-phosphohexomutase superfamily YPTB0476 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTB0476 IPR006352 Phosphoglucosamine mutase, bacterial type YPTB0476 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTB0477 IPR004692 Preprotein translocase SecG subunit YPTB0478 IPR003728 Ribosome maturation factor RimP YPTB0478 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YPTB0478 IPR028989 Ribosome maturation factor RimP, N-terminal YPTB0478 IPR035956 RimP, N-terminal domain superfamily YPTB0478 IPR028998 Ribosome maturation factor RimP, C-terminal YPTB0479 IPR030842 Transcription termination/antitermination protein NusA, bacterial YPTB0479 IPR010213 Transcription termination factor NusA YPTB0479 IPR010214 Transcription termination factor NusA, C-terminal duplication YPTB0479 IPR012340 Nucleic acid-binding, OB-fold YPTB0479 IPR009019 K homology domain superfamily, prokaryotic type YPTB0479 IPR013735 Transcription factor NusA, N-terminal YPTB0479 IPR003029 S1 domain YPTB0479 IPR022967 RNA-binding domain, S1 YPTB0479 IPR015946 K homology domain-like, alpha/beta YPTB0479 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPTB0479 IPR036555 NusA, N-terminal domain superfamily YPTB0479 IPR025249 KH domain, NusA-like YPTB0480 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB0480 IPR005225 Small GTP-binding protein domain YPTB0480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0480 IPR000795 Transcription factor, GTP-binding domain YPTB0480 IPR013575 Initiation factor 2 associated domain, bacterial YPTB0480 IPR006847 Translation initiation factor IF-2, N-terminal YPTB0480 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0480 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YPTB0480 IPR000178 Translation initiation factor aIF-2, bacterial-like YPTB0480 IPR015760 Translation initiation factor IF- 2 YPTB0480 IPR023115 Translation initiation factor IF- 2, domain 3 YPTB0480 IPR009061 Putative DNA-binding domain superfamily YPTB0481 IPR023799 Ribosome-binding factor A domain superfamily YPTB0481 IPR000238 Ribosome-binding factor A YPTB0481 IPR015946 K homology domain-like, alpha/beta YPTB0481 IPR020053 Ribosome-binding factor A, conserved site YPTB0482 IPR015947 PUA-like superfamily YPTB0482 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB0482 IPR014780 tRNA pseudouridine synthase II, TruB YPTB0482 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPTB0482 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPTB0482 IPR036974 PUA domain superfamily YPTB0482 IPR002501 Pseudouridine synthase II, N-terminal YPTB0483 IPR000589 Ribosomal protein S15 YPTB0483 IPR009068 S15/NS1, RNA-binding YPTB0483 IPR005290 Ribosomal protein S15, bacterial-type YPTB0484 IPR004088 K Homology domain, type 1 YPTB0484 IPR036345 Exoribonuclease, PH domain 2 superfamily YPTB0484 IPR036612 K Homology domain, type 1 superfamily YPTB0484 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPTB0484 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPTB0484 IPR012162 Polyribonucleotide nucleotidyltransferase YPTB0484 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily YPTB0484 IPR004087 K Homology domain YPTB0484 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPTB0484 IPR027408 PNPase/RNase PH domain superfamily YPTB0484 IPR012340 Nucleic acid-binding, OB-fold YPTB0484 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0484 IPR003029 S1 domain YPTB0484 IPR022967 RNA-binding domain, S1 YPTB0485 IPR019734 Tetratricopeptide repeat YPTB0485 IPR013026 Tetratricopeptide repeat-containing domain YPTB0485 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB0485 IPR023605 Lipoprotein NlpI YPTB0485 IPR013105 Tetratricopeptide repeat 2 YPTB0486 IPR014014 RNA helicase, DEAD-box type, Q motif YPTB0486 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB0486 IPR001650 Helicase, C-terminal YPTB0486 IPR011545 DEAD/DEAH box helicase domain YPTB0486 IPR028618 ATP-dependent RNA helicase DeaD YPTB0486 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPTB0486 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0486 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTB0486 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0486 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPTB0486 IPR034415 CsdA, RNA recognition motif YPTB0489 IPR001387 Cro/C1-type helix-turn-helix domain YPTB0489 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB0490 IPR019949 Luciferase family oxidoreductase, group 1 YPTB0490 IPR036661 Luciferase-like domain superfamily YPTB0490 IPR011251 Luciferase-like domain YPTB0491 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB0491 IPR006143 RND efflux pump, membrane fusion protein YPTB0492 IPR001036 Acriflavin resistance protein YPTB0492 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTB0492 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB0493 IPR012640 Membrane lipoprotein, lipid attachment site YPTB0493 IPR003423 Outer membrane efflux protein YPTB0493 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPTB0497 IPR000182 GNAT domain YPTB0497 IPR016181 Acyl-CoA N-acyltransferase YPTB0498 IPR000305 GIY-YIG endonuclease YPTB0498 IPR035901 GIY-YIG endonuclease superfamily YPTB0498 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPTB0501 IPR006059 Bacterial extracellular solute-binding protein YPTB0503 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0503 IPR035906 MetI-like superfamily YPTB0504 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0504 IPR005116 Transport-associated OB, type 1 YPTB0504 IPR040582 MalK, OB fold domain YPTB0504 IPR003593 AAA+ ATPase domain YPTB0504 IPR003439 ABC transporter-like YPTB0504 IPR017871 ABC transporter, conserved site YPTB0504 IPR008995 Molybdate/tungstate binding, C-terminal YPTB0506 IPR012349 FMN-binding split barrel YPTB0506 IPR011194 Uncharacterised protein family UPF0306 YPTB0507 IPR036291 NAD(P)-binding domain superfamily YPTB0507 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTB0507 IPR016040 NAD(P)-binding domain YPTB0508 IPR035682 Phosphonate metabolism protein, MBL domain YPTB0508 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB0508 IPR001279 Metallo-beta-lactamase YPTB0508 IPR017693 Phosphonate metabolism protein PhnP YPTB0509 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTB0509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0509 IPR008144 Guanylate kinase-like domain YPTB0509 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPTB0510 IPR013108 Amidohydrolase 3 YPTB0510 IPR012696 Phosphonate metabolism PhnM YPTB0510 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB0510 IPR032466 Metal-dependent hydrolase YPTB0511 IPR003593 AAA+ ATPase domain YPTB0511 IPR003439 ABC transporter-like YPTB0511 IPR017871 ABC transporter, conserved site YPTB0511 IPR012701 Phosphonate C-P lyase system, PhnL YPTB0511 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0512 IPR017871 ABC transporter, conserved site YPTB0512 IPR003593 AAA+ ATPase domain YPTB0512 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0512 IPR003439 ABC transporter-like YPTB0512 IPR012700 Phosphonate C-P lyase system, PhnK YPTB0513 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase YPTB0514 IPR008773 Phosphonate metabolism protein PhnI YPTB0515 IPR008772 Bacterial phosphonate metabolism, PhnH YPTB0515 IPR038058 PhnH-like superfamily YPTB0516 IPR009609 Phosphonate metabolism PhnG YPTB0517 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTB0517 IPR000524 Transcription regulator HTH, GntR YPTB0517 IPR011663 UbiC transcription regulator-associated YPTB0517 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0517 IPR036390 Winged helix DNA-binding domain superfamily YPTB0517 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPTB0518 IPR013785 Aldolase-type TIM barrel YPTB0518 IPR034457 Organic radical-activating enzymes YPTB0518 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPTB0518 IPR001989 Radical-activating enzyme, conserved site YPTB0519 IPR005144 ATP-cone domain YPTB0519 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB0519 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPTB0519 IPR001150 Glycine radical domain YPTB0520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0520 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB0520 IPR003593 AAA+ ATPase domain YPTB0520 IPR003439 ABC transporter-like YPTB0520 IPR017871 ABC transporter, conserved site YPTB0521 IPR017871 ABC transporter, conserved site YPTB0521 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB0521 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0521 IPR003439 ABC transporter-like YPTB0521 IPR003593 AAA+ ATPase domain YPTB0522 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB0522 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0522 IPR035906 MetI-like superfamily YPTB0523 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0523 IPR035906 MetI-like superfamily YPTB0525 IPR004375 YhcH/YjgK/YiaL family YPTB0525 IPR037012 YhcH/YjgK/YiaL superfamily YPTB0526 IPR024904 Ornithine carbamoyltransferase YPTB0526 IPR002292 Ornithine/putrescine carbamoyltransferase YPTB0526 IPR006130 Aspartate/ornithine carbamoyltransferase YPTB0526 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPTB0526 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPTB0526 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPTB0527 IPR009671 Regulator of ribonuclease activity B domain YPTB0527 IPR036701 RraB-like superfamily YPTB0527 IPR016716 Regulator of ribonuclease activity B YPTB0528 IPR016181 Acyl-CoA N-acyltransferase YPTB0528 IPR000182 GNAT domain YPTB0529 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB0529 IPR033705 Valyl tRNA synthetase, anticodon-binding domain YPTB0529 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTB0529 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTB0529 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0529 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTB0529 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPTB0529 IPR002303 Valine-tRNA ligase YPTB0529 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTB0529 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPTB0529 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB0530 IPR036768 DNA polymerase III subunit chi superfamily YPTB0530 IPR007459 DNA polymerase III chi subunit, HolC YPTB0531 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPTB0531 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPTB0531 IPR023042 Peptidase M17, leucine aminopeptidase YPTB0531 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPTB0532 IPR030922 LPS export ABC transporter permease LptF YPTB0532 IPR005495 Permease LptG/LptF-related YPTB0533 IPR005495 Permease LptG/LptF-related YPTB0533 IPR030923 LPS export ABC transporter permease LptG YPTB0535 IPR022625 Type-1 restriction enzyme R protein, C-terminal YPTB0535 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0535 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0535 IPR040980 SWI2/SNF2 ATPase YPTB0535 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal YPTB0535 IPR004473 Restriction endonuclease, type I, HsdR YPTB0537 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YPTB0537 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily YPTB0537 IPR003356 DNA methylase, adenine-specific YPTB0537 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB0537 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0537 IPR004546 Restriction endonuclease, type I, HsdM YPTB0539 IPR010295 Protein of unknown function DUF898 YPTB0541 IPR020449 Transcription regulator HTH, AraC- type YPTB0541 IPR018060 DNA binding HTH domain, AraC-type YPTB0541 IPR018062 HTH domain AraC-type, conserved site YPTB0541 IPR009057 Homeobox-like domain superfamily YPTB0542 IPR036095 PTS system IIB component-like superfamily YPTB0542 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTB0542 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTB0542 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPTB0543 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPTB0543 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTB0543 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTB0543 IPR036095 PTS system IIB component-like superfamily YPTB0544 IPR013014 Phosphotransferase system, EIIC component, type 2 YPTB0544 IPR006327 Phosphotransferase system, fructose IIC component YPTB0545 IPR000121 PEP-utilising enzyme, C-terminal YPTB0545 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB0545 IPR040442 Pyruvate kinase-like domain superfamily YPTB0545 IPR036618 PtsI, HPr-binding domain superfamily YPTB0545 IPR023151 PEP-utilising enzyme, conserved site YPTB0545 IPR006318 Phosphotransferase system, enzyme I-like YPTB0545 IPR018274 PEP-utilising enzyme, active site YPTB0545 IPR008279 PEP-utilising enzyme, mobile domain YPTB0545 IPR036637 Phosphohistidine domain superfamily YPTB0545 IPR035895 HPr-like superfamily YPTB0545 IPR016152 Phosphotransferase/anion transporter YPTB0545 IPR002178 PTS EIIA type-2 domain YPTB0545 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB0545 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTB0545 IPR000032 Phosphocarrier protein HPr-like YPTB0546 IPR019637 Protein of unknown function DUF2501 YPTB0547 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase YPTB0547 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTB0547 IPR011008 Dimeric alpha-beta barrel YPTB0548 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase YPTB0548 IPR013785 Aldolase-type TIM barrel YPTB0548 IPR041720 Aldolase FbaB-like, archaeal-type YPTB0548 IPR002915 DeoC/FbaB/ lacD aldolase YPTB0549 IPR025997 Periplasmic binding protein YPTB0549 IPR028082 Periplasmic binding protein-like I YPTB0549 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPTB0550 IPR001851 ABC transporter, permease YPTB0551 IPR001851 ABC transporter, permease YPTB0552 IPR003439 ABC transporter-like YPTB0552 IPR003593 AAA+ ATPase domain YPTB0552 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0552 IPR017871 ABC transporter, conserved site YPTB0552 IPR030281 Autoinducer 2 import ATP-binding protein LsrA YPTB0553 IPR037171 NagB/RpiA transferase-like YPTB0553 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0553 IPR007324 Sugar-binding domain, putative YPTB0553 IPR012318 Crp-type HTH domain YPTB0554 IPR000577 Carbohydrate kinase, FGGY YPTB0554 IPR033676 Autoinducer-2 kinase YPTB0554 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB0554 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB0555 IPR002201 Glycosyl transferase, family 9 YPTB0555 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPTB0557 IPR010970 Cysteine desulfurase, SufS YPTB0557 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0557 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0557 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0557 IPR000192 Aminotransferase class V domain YPTB0558 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPTB0558 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPTB0558 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTB0558 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTB0558 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPTB0558 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTB0561 IPR001763 Rhodanese-like domain YPTB0561 IPR000594 THIF-type NAD/FAD binding fold YPTB0561 IPR035985 Ubiquitin-activating enzyme YPTB0561 IPR036873 Rhodanese-like domain superfamily YPTB0565 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB0565 IPR006143 RND efflux pump, membrane fusion protein YPTB0566 IPR001036 Acriflavin resistance protein YPTB0566 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB0569 IPR033131 Pectinesterase, Asp active site YPTB0569 IPR000070 Pectinesterase, catalytic YPTB0569 IPR012334 Pectin lyase fold YPTB0569 IPR011050 Pectin lyase fold/virulence factor YPTB0570 IPR009050 Globin-like superfamily YPTB0570 IPR039435 Diguanylate cyclase DosC, globin sensor domain YPTB0570 IPR029787 Nucleotide cyclase YPTB0570 IPR012292 Globin/Protoglobin YPTB0570 IPR000160 GGDEF domain YPTB0571 IPR009885 Protein of unknown function DUF1435 YPTB0572 IPR007848 Methyltransferase small domain YPTB0572 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB0572 IPR013675 Methyltransferase small, N-terminal YPTB0572 IPR023543 rRNA small subunit methyltransferase C YPTB0572 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0573 IPR036654 DNA polymerase III, psi subunit superfamily YPTB0573 IPR018382 DNA polymerase III, psi subunit, subgroup YPTB0573 IPR004615 DNA polymerase III, psi subunit YPTB0574 IPR000182 GNAT domain YPTB0574 IPR016181 Acyl-CoA N-acyltransferase YPTB0574 IPR006464 N-acetyltransferase RimI/Ard1 YPTB0575 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0575 IPR032090 Peptide chain release factor 3, C-terminal YPTB0575 IPR005225 Small GTP-binding protein domain YPTB0575 IPR035647 EF-G domain III/V-like YPTB0575 IPR041732 Peptide chain release factor 3, GTP-binding domain YPTB0575 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily YPTB0575 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB0575 IPR004548 Peptide chain release factor 3 YPTB0575 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0575 IPR031157 Tr-type G domain, conserved site YPTB0575 IPR000795 Transcription factor, GTP-binding domain YPTB0576 IPR007055 BON domain YPTB0576 IPR014004 Transport-associated and nodulation domain, bacteria YPTB0577 IPR009760 Protein of unknown function DUF1328 YPTB0578 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTB0578 IPR002641 Patatin-like phospholipase domain YPTB0578 IPR037483 YjjU-like YPTB0579 IPR001130 TatD family YPTB0579 IPR032466 Metal-dependent hydrolase YPTB0579 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTB0580 IPR002668 Concentrative nucleoside transporter N-terminal domain YPTB0580 IPR008276 Concentrative nucleoside transporter YPTB0580 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPTB0580 IPR011657 Concentrative nucleoside transporter C-terminal domain YPTB0580 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTB0581 IPR011343 Deoxyribose-phosphate aldolase YPTB0581 IPR002915 DeoC/FbaB/ lacD aldolase YPTB0581 IPR023649 Deoxyribose-phosphate aldolase type II YPTB0581 IPR013785 Aldolase-type TIM barrel YPTB0582 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic YPTB0582 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPTB0582 IPR013465 Thymidine phosphorylase YPTB0582 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily YPTB0582 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB0582 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTB0582 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPTB0582 IPR000312 Glycosyl transferase, family 3 YPTB0582 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTB0582 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase YPTB0583 IPR006124 Metalloenzyme YPTB0583 IPR010045 Phosphopentomutase YPTB0583 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB0583 IPR024052 Phosphopentomutase DeoB cap domain superfamily YPTB0584 IPR035994 Nucleoside phosphorylase superfamily YPTB0584 IPR000845 Nucleoside phosphorylase domain YPTB0584 IPR018016 Nucleoside phosphorylase, conserved site YPTB0584 IPR004402 Purine nucleoside phosphorylase DeoD-type YPTB0585 IPR019305 Uncharacterised protein family Smp YPTB0586 IPR041449 Phosphoserine phosphatase, N-terminal YPTB0586 IPR036412 HAD-like superfamily YPTB0586 IPR023214 HAD superfamily YPTB0586 IPR023190 Phosphoserine phosphatase, domain 2 YPTB0587 IPR003593 AAA+ ATPase domain YPTB0587 IPR004504 DNA repair protein RadA YPTB0587 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0587 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0587 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB0587 IPR041166 LapB, rubredoxin metal binding domain YPTB0587 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPTB0588 IPR001387 Cro/C1-type helix-turn-helix domain YPTB0588 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0588 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB0588 IPR016429 NAD biosynthesis/regulator protein NadR YPTB0588 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0588 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain YPTB0588 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPTB0588 IPR038727 NadR/Ttd14, AAA domain YPTB0588 IPR004821 Cytidyltransferase-like domain YPTB0590 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0590 IPR017871 ABC transporter, conserved site YPTB0590 IPR003439 ABC transporter-like YPTB0590 IPR032781 ABC-transporter extension domain YPTB0590 IPR003593 AAA+ ATPase domain YPTB0590 IPR022374 Energy-dependent translational throttle protein EttA YPTB0591 IPR006664 Outer membrane protein, bacterial YPTB0591 IPR006665 OmpA-like domain YPTB0591 IPR036737 OmpA-like domain superfamily YPTB0592 IPR033417 Periplasmic sensor domain CHASE8 YPTB0592 IPR000160 GGDEF domain YPTB0592 IPR003660 HAMP domain YPTB0592 IPR029787 Nucleotide cyclase YPTB0594 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB0594 IPR036412 HAD-like superfamily YPTB0594 IPR008250 P-type ATPase, A domain superfamily YPTB0594 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB0594 IPR018303 P-type ATPase, phosphorylation site YPTB0594 IPR023299 P-type ATPase, cytoplasmic domain N YPTB0594 IPR001757 P-type ATPase YPTB0594 IPR023214 HAD superfamily YPTB0594 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTB0595 IPR023346 Lysozyme-like domain superfamily YPTB0595 IPR008258 Transglycosylase SLT domain 1 YPTB0595 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily YPTB0595 IPR012289 Lytic transglycosylase, superhelical linker YPTB0595 IPR008939 Lytic transglycosylase, superhelical U-shaped YPTB0595 IPR000189 Prokaryotic transglycosylase, active site YPTB0596 IPR000831 Trp repressor YPTB0596 IPR013335 Trp repressor, bacterial YPTB0596 IPR010921 Trp repressor/replication initiator YPTB0596 IPR038116 TrpR-like superfamily YPTB0597 IPR002786 Inosine/xanthosine triphosphatase YPTB0597 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB0597 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPTB0598 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB0598 IPR029033 Histidine phosphatase superfamily YPTB0598 IPR023086 Phosphoglycerate mutase, GpmB, probable YPTB0598 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPTB0599 IPR029442 GyrI-like small molecule binding domain YPTB0599 IPR010499 Bacterial transcription activator, effector binding YPTB0599 IPR018060 DNA binding HTH domain, AraC-type YPTB0599 IPR011256 Regulatory factor, effector binding domain superfamily YPTB0599 IPR018062 HTH domain AraC-type, conserved site YPTB0599 IPR020449 Transcription regulator HTH, AraC- type YPTB0599 IPR009057 Homeobox-like domain superfamily YPTB0600 IPR010292 Uncharacterised protein family CreA YPTB0601 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB0601 IPR011006 CheY-like superfamily YPTB0601 IPR039420 Transcriptional regulatory protein WalR-like YPTB0601 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0601 IPR001789 Signal transduction response regulator, receiver domain YPTB0601 IPR016032 Signal transduction response regulator, C-terminal effector YPTB0602 IPR036393 Acetylglutamate kinase-like superfamily YPTB0602 IPR027795 CASTOR, ACT domain YPTB0602 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPTB0602 IPR001342 Homoserine dehydrogenase, catalytic YPTB0602 IPR018042 Aspartate kinase, conserved site YPTB0602 IPR019811 Homoserine dehydrogenase, conserved site YPTB0602 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPTB0602 IPR001048 Aspartate/glutamate/uridylate kinase YPTB0602 IPR036291 NAD(P)-binding domain superfamily YPTB0602 IPR001341 Aspartate kinase YPTB0602 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPTB0602 IPR002912 ACT domain YPTB0603 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0603 IPR000870 Homoserine kinase YPTB0603 IPR006203 GHMP kinase, ATP-binding, conserved site YPTB0603 IPR013750 GHMP kinase, C-terminal domain YPTB0603 IPR036554 GHMP kinase, C-terminal domain superfamily YPTB0603 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB0603 IPR006204 GHMP kinase N-terminal domain YPTB0604 IPR029144 Threonine synthase, N-terminal YPTB0604 IPR037158 Threonine synthase, N-terminal domain superfamily YPTB0604 IPR004450 Threonine synthase-like YPTB0604 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB0604 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTB0604 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB0605 IPR005583 Peroxide stress protein YaaA YPTB0606 IPR004730 Transaldolase type 1 YPTB0606 IPR018225 Transaldolase, active site YPTB0606 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPTB0606 IPR013785 Aldolase-type TIM barrel YPTB0607 IPR036425 MoaB/Mog-like domain superfamily YPTB0607 IPR001453 MoaB/Mog domain YPTB0607 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPTB0608 IPR036259 MFS transporter superfamily YPTB0608 IPR011701 Major facilitator superfamily YPTB0608 IPR020846 Major facilitator superfamily domain YPTB0608 IPR005829 Sugar transporter, conserved site YPTB0610 IPR000791 Acetate transporter GPR1/FUN34/SatP family YPTB0611 IPR013126 Heat shock protein 70 family YPTB0611 IPR018181 Heat shock protein 70, conserved site YPTB0611 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPTB0611 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPTB0611 IPR012725 Chaperone DnaK YPTB0612 IPR012724 Chaperone DnaJ YPTB0612 IPR002939 Chaperone DnaJ, C-terminal YPTB0612 IPR036869 Chaperone J-domain superfamily YPTB0612 IPR018253 DnaJ domain, conserved site YPTB0612 IPR008971 HSP40/DnaJ peptide-binding YPTB0612 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YPTB0612 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPTB0612 IPR001623 DnaJ domain YPTB0613 IPR023171 Na/H antiporter domain superfamily YPTB0613 IPR004670 Na+/H+ antiporter NhaA YPTB0614 IPR005119 LysR, substrate-binding YPTB0614 IPR000847 Transcription regulator HTH, LysR YPTB0614 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0614 IPR036390 Winged helix DNA-binding domain superfamily YPTB0615 IPR036510 Ribosomal protein S20 superfamily YPTB0615 IPR002583 Ribosomal protein S20 YPTB0616 IPR023468 Riboflavin kinase YPTB0616 IPR015864 FAD synthetase YPTB0616 IPR002606 Riboflavin kinase, bacterial YPTB0616 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPTB0616 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0616 IPR023465 Riboflavin kinase domain superfamily YPTB0617 IPR010663 Zinc finger, FPG/IleRS-type YPTB0617 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTB0617 IPR023585 Isoleucine-tRNA ligase, type 1 YPTB0617 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain YPTB0617 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTB0617 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB0617 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTB0617 IPR002301 Isoleucine-tRNA ligase YPTB0617 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB0617 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0618 IPR001872 Peptidase A8, signal peptidase II YPTB0619 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTB0620 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPTB0621 IPR036515 Transposase IS200-like superfamily YPTB0621 IPR002686 Transposase IS200-like YPTB0622 IPR000846 Dihydrodipicolinate reductase, N-terminal YPTB0622 IPR022664 Dihydrodipicolinate reductase, conserved site YPTB0622 IPR023940 Dihydrodipicolinate reductase YPTB0622 IPR022663 Dihydrodipicolinate reductase, C-terminal YPTB0622 IPR036291 NAD(P)-binding domain superfamily YPTB0623 IPR017926 Glutamine amidotransferase YPTB0623 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain YPTB0623 IPR029062 Class I glutamine amidotransferase-like YPTB0623 IPR006274 Carbamoyl-phosphate synthase, small subunit YPTB0623 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain YPTB0623 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily YPTB0624 IPR016185 Pre-ATP-grasp domain superfamily YPTB0624 IPR011607 Methylglyoxal synthase-like domain YPTB0624 IPR036914 Methylglyoxal synthase-like domain superfamily YPTB0624 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPTB0624 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPTB0624 IPR006275 Carbamoyl-phosphate synthase, large subunit YPTB0624 IPR011761 ATP-grasp fold YPTB0624 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain YPTB0624 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily YPTB0624 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPTB0625 IPR001123 Amino acid exporter protein, LeuE-type YPTB0626 IPR010619 Putative threonine/serine exporter YPTB0627 IPR020914 Uncharacterised protein family UPF0442 YPTB0627 IPR024528 Threonine/Serine exporter, ThrE YPTB0628 IPR001796 Dihydrofolate reductase domain YPTB0628 IPR017925 Dihydrofolate reductase conserved site YPTB0628 IPR024072 Dihydrofolate reductase-like domain superfamily YPTB0628 IPR012259 Dihydrofolate reductase YPTB0631 IPR029052 Metallo-dependent phosphatase-like YPTB0631 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTB0631 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPTB0632 IPR023065 Uncharacterised protein family ApaG YPTB0632 IPR036767 ApaG domain superfamily YPTB0632 IPR007474 ApaG domain YPTB0633 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPTB0633 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPTB0633 IPR011530 Ribosomal RNA adenine dimethylase YPTB0633 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPTB0633 IPR023165 rRNA adenine dimethylase-like YPTB0633 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0634 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase YPTB0634 IPR005255 PdxA family YPTB0635 IPR015391 SurA N-terminal YPTB0635 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTB0635 IPR027304 Trigger factor/SurA domain superfamily YPTB0635 IPR023034 Peptidyl-prolyl isomerase SurA YPTB0636 IPR020889 LPS-assembly protein LptD YPTB0636 IPR007543 LptD, C-terminal YPTB0636 IPR005653 Organic solvent tolerance-like, N-terminal YPTB0637 IPR036869 Chaperone J-domain superfamily YPTB0637 IPR001623 DnaJ domain YPTB0637 IPR007791 Co-chaperone DjlA, N-terminal YPTB0637 IPR029024 TerB-like YPTB0637 IPR023749 Co-chaperone DjlA YPTB0638 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB0638 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB0638 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTB0647 IPR041546 ClpA/ClpB, AAA lid domain YPTB0647 IPR018368 ClpA/B, conserved site 1 YPTB0647 IPR001270 ClpA/B family YPTB0647 IPR004176 Clp, N-terminal YPTB0647 IPR036628 Clp, N-terminal domain superfamily YPTB0647 IPR019489 Clp ATPase, C-terminal YPTB0647 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB0647 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0647 IPR003593 AAA+ ATPase domain YPTB0647 IPR003959 ATPase, AAA-type, core YPTB0648 IPR006531 Gp5 N-terminal YPTB0648 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB0648 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB0648 IPR037026 Vgr protein, OB-fold domain superfamily YPTB0655 IPR008722 Outer membrane porin F, N-terminal YPTB0655 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB0655 IPR006664 Outer membrane protein, bacterial YPTB0655 IPR006665 OmpA-like domain YPTB0655 IPR036737 OmpA-like domain superfamily YPTB0655 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB0658 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPTB0658 IPR038718 SNF2-like, N-terminal domain superfamily YPTB0658 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0658 IPR000330 SNF2-related, N-terminal domain YPTB0658 IPR023949 RNA polymerase-associated protein RapA YPTB0658 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0658 IPR001650 Helicase, C-terminal YPTB0658 IPR040765 RapA, N-terminal Tudor like domain 1 YPTB0658 IPR040766 RapA, N-terminal Tudor-like domain 2 YPTB0659 IPR023211 DNA polymerase, palm domain superfamily YPTB0659 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPTB0659 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPTB0659 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPTB0659 IPR012337 Ribonuclease H-like superfamily YPTB0659 IPR036397 Ribonuclease H superfamily YPTB0659 IPR042087 DNA polymerase family B, C-terminal domain YPTB0659 IPR006172 DNA-directed DNA polymerase, family B YPTB0660 IPR032818 DedA family YPTB0660 IPR032816 SNARE associated Golgi protein YPTB0661 IPR017871 ABC transporter, conserved site YPTB0661 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPTB0661 IPR003439 ABC transporter-like YPTB0661 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0661 IPR003593 AAA+ ATPase domain YPTB0662 IPR035906 MetI-like superfamily YPTB0662 IPR005947 Thiamine ABC transporter, permease protein YPTB0662 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0663 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria YPTB0663 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter YPTB0663 IPR006061 Solute-binding family 1, conserved site YPTB0666 IPR025948 HTH-like domain YPTB0666 IPR001584 Integrase, catalytic core YPTB0666 IPR012337 Ribonuclease H-like superfamily YPTB0666 IPR036397 Ribonuclease H superfamily YPTB0667 IPR023767 Transcriptional regulator SgrR YPTB0667 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTB0667 IPR000914 Solute-binding protein family 5 domain YPTB0667 IPR039424 Solute-binding protein family 5 YPTB0667 IPR036390 Winged helix DNA-binding domain superfamily YPTB0668 IPR004750 Sugar efflux YPTB0668 IPR011701 Major facilitator superfamily YPTB0668 IPR036259 MFS transporter superfamily YPTB0668 IPR020846 Major facilitator superfamily domain YPTB0669 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPTB0669 IPR033940 3-isopropylmalate dehydratase, swivel domain YPTB0669 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB0669 IPR004431 3-isopropylmalate dehydratase, small subunit YPTB0670 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTB0670 IPR036008 Aconitase, iron-sulfur domain YPTB0670 IPR004430 3-isopropylmalate dehydratase, large subunit YPTB0670 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTB0670 IPR033941 3-Isopropylmalate dehydratase, catalytic domain YPTB0670 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTB0671 IPR024084 Isopropylmalate dehydrogenase-like domain YPTB0671 IPR004429 Isopropylmalate dehydrogenase YPTB0671 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTB0672 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily YPTB0672 IPR000891 Pyruvate carboxyltransferase YPTB0672 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPTB0672 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPTB0672 IPR013785 Aldolase-type TIM barrel YPTB0672 IPR005671 2-isopropylmalate synthase, bacterial-type YPTB0673 IPR005119 LysR, substrate-binding YPTB0673 IPR000847 Transcription regulator HTH, LysR YPTB0673 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0673 IPR036390 Winged helix DNA-binding domain superfamily YPTB0674 IPR042099 AMP-dependent synthetase-like superfamily YPTB0674 IPR000873 AMP-dependent synthetase/ligase YPTB0674 IPR020845 AMP-binding, conserved site YPTB0675 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTB0675 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB0675 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB0675 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTB0675 IPR029061 Thiamin diphosphate-binding fold YPTB0675 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTB0675 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB0675 IPR000399 TPP-binding enzyme, conserved site YPTB0676 IPR039557 AHAS, ACT domain YPTB0676 IPR002912 ACT domain YPTB0676 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YPTB0676 IPR004789 Acetolactate synthase, small subunit YPTB0676 IPR019455 Acetolactate synthase, small subunit, C-terminal YPTB0677 IPR012781 D-fructose-responsive transcription factor YPTB0677 IPR000843 LacI-type HTH domain YPTB0677 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB0677 IPR028082 Periplasmic binding protein-like I YPTB0677 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB0678 IPR010574 L-alanine exporter AlaE YPTB0679 IPR020603 MraZ domain YPTB0679 IPR003444 Transcriptional regulator MraZ YPTB0679 IPR007159 SpoVT-AbrB domain YPTB0679 IPR035642 MraZ, N-terminal YPTB0679 IPR038619 MraZ superfamily YPTB0679 IPR035644 MraZ, C-terminal YPTB0679 IPR037914 SpoVT-AbrB domain superfamily YPTB0680 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily YPTB0680 IPR002903 Ribosomal RNA small subunit methyltransferase H YPTB0680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0681 IPR011922 Cell division protein FtsL YPTB0682 IPR012338 Beta-lactamase/transpeptidase-like YPTB0682 IPR001460 Penicillin-binding protein, transpeptidase YPTB0682 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPTB0682 IPR005311 Penicillin-binding protein, dimerisation domain YPTB0682 IPR037532 Peptidoglycan D,D-transpeptidase FtsI YPTB0683 IPR036615 Mur ligase, C-terminal domain superfamily YPTB0683 IPR004101 Mur ligase, C-terminal YPTB0683 IPR013221 Mur ligase, central YPTB0683 IPR000713 Mur ligase, N-terminal catalytic domain YPTB0683 IPR035911 MurE/MurF, N-terminal YPTB0683 IPR036565 Mur-like, catalytic domain superfamily YPTB0683 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPTB0684 IPR004101 Mur ligase, C-terminal YPTB0684 IPR035911 MurE/MurF, N-terminal YPTB0684 IPR000713 Mur ligase, N-terminal catalytic domain YPTB0684 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YPTB0684 IPR013221 Mur ligase, central YPTB0684 IPR036615 Mur ligase, C-terminal domain superfamily YPTB0684 IPR036565 Mur-like, catalytic domain superfamily YPTB0685 IPR000715 Glycosyl transferase, family 4 YPTB0685 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPTB0685 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPTB0686 IPR013221 Mur ligase, central YPTB0686 IPR036615 Mur ligase, C-terminal domain superfamily YPTB0686 IPR004101 Mur ligase, C-terminal YPTB0686 IPR036565 Mur-like, catalytic domain superfamily YPTB0686 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPTB0687 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPTB0687 IPR013437 Probable peptidoglycan glycosyltransferase FtsW YPTB0687 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPTB0688 IPR004276 Glycosyltransferase family 28, N-terminal domain YPTB0688 IPR007235 Glycosyl transferase, family 28, C-terminal YPTB0688 IPR006009 N-acetylglucosaminyltransferase, MurG YPTB0689 IPR036615 Mur ligase, C-terminal domain superfamily YPTB0689 IPR004101 Mur ligase, C-terminal YPTB0689 IPR000713 Mur ligase, N-terminal catalytic domain YPTB0689 IPR013221 Mur ligase, central YPTB0689 IPR036565 Mur-like, catalytic domain superfamily YPTB0689 IPR005758 UDP-N-acetylmuramate--L-alanine ligase YPTB0690 IPR011095 D-alanine--D-alanine ligase, C-terminal YPTB0690 IPR011761 ATP-grasp fold YPTB0690 IPR013815 ATP-grasp fold, subdomain 1 YPTB0690 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPTB0690 IPR005905 D-alanine--D-alanine ligase YPTB0690 IPR016185 Pre-ATP-grasp domain superfamily YPTB0690 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPTB0691 IPR026579 Cell division protein FtsQ YPTB0691 IPR034746 POTRA domain YPTB0691 IPR005548 Cell division protein FtsQ/DivIB YPTB0691 IPR013685 POTRA domain, FtsQ-type YPTB0692 IPR020823 Cell division protein FtsA YPTB0692 IPR003494 SHS2 domain inserted in FtsA YPTB0693 IPR024757 Cell division protein FtsZ, C-terminal YPTB0693 IPR008280 Tubulin/FtsZ, C-terminal YPTB0693 IPR000158 Cell division protein FtsZ YPTB0693 IPR020805 Cell division protein FtsZ, conserved site YPTB0693 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPTB0693 IPR036525 Tubulin/FtsZ, GTPase domain superfamily YPTB0693 IPR003008 Tubulin/FtsZ, GTPase domain YPTB0694 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPTB0694 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPTB0694 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0694 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPTB0696 IPR009502 Secretion monitor YPTB0697 IPR000185 Protein translocase subunit SecA YPTB0697 IPR004027 SEC-C motif YPTB0697 IPR036670 SecA, preprotein cross-linking domain superfamily YPTB0697 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0697 IPR014018 SecA motor DEAD YPTB0697 IPR011130 SecA, preprotein cross-linking domain YPTB0697 IPR036266 SecA, Wing/Scaffold superfamily YPTB0697 IPR020937 SecA conserved site YPTB0697 IPR011115 SecA DEAD-like, N-terminal YPTB0697 IPR011116 SecA Wing/Scaffold YPTB0698 IPR015797 NUDIX hydrolase-like domain superfamily YPTB0698 IPR020084 NUDIX hydrolase, conserved site YPTB0698 IPR000086 NUDIX hydrolase domain YPTB0698 IPR003561 Mutator MutT YPTB0698 IPR020476 NUDIX hydrolase YPTB0699 IPR036515 Transposase IS200-like superfamily YPTB0699 IPR002686 Transposase IS200-like YPTB0700 IPR005584 DNA gyrase inhibitor YacG YPTB0700 IPR013088 Zinc finger, NHR/GATA-type YPTB0701 IPR027462 Z ring-associated protein D, C-terminal YPTB0701 IPR036268 ZapD domain superfamily YPTB0701 IPR009777 Cell division protein ZapD YPTB0702 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0702 IPR001977 Dephospho-CoA kinase YPTB0703 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPTB0703 IPR013785 Aldolase-type TIM barrel YPTB0703 IPR005993 GMP reductase YPTB0703 IPR001093 IMP dehydrogenase/GMP reductase YPTB0704 IPR001207 Transposase, mutator type YPTB0705 IPR018076 Type II secretion system F domain YPTB0705 IPR001992 Type II secretion system conserved site YPTB0705 IPR003004 GspF/PilC family YPTB0705 IPR042094 Type II secretion system F domain superfamily YPTB0706 IPR007831 General secretory system II, protein E, N-terminal YPTB0706 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0706 IPR001482 Type II/IV secretion system protein YPTB0707 IPR012902 Prokaryotic N-terminal methylation site YPTB0708 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily YPTB0708 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPTB0708 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPTB0708 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPTB0708 IPR013785 Aldolase-type TIM barrel YPTB0708 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPTB0708 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPTB0709 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTB0709 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTB0710 IPR031347 Protein AmpE YPTB0711 IPR004841 Amino acid permease/ SLC12A domain YPTB0711 IPR004840 Amino acid permease, conserved site YPTB0712 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0712 IPR000524 Transcription regulator HTH, GntR YPTB0712 IPR011711 GntR, C-terminal YPTB0712 IPR036390 Winged helix DNA-binding domain superfamily YPTB0712 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB0713 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal YPTB0713 IPR004660 Pyruvate dehydrogenase E1 component YPTB0713 IPR005474 Transketolase, N-terminal YPTB0713 IPR041621 Pyruvate dehydrogenase E1 component, middle domain YPTB0713 IPR029061 Thiamin diphosphate-binding fold YPTB0713 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTB0714 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB0714 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB0714 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPTB0714 IPR011053 Single hybrid motif YPTB0714 IPR004167 Peripheral subunit-binding domain YPTB0714 IPR036625 E3-binding domain superfamily YPTB0714 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPTB0714 IPR000089 Biotin/lipoyl attachment YPTB0715 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTB0715 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTB0715 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTB0715 IPR006258 Dihydrolipoamide dehydrogenase YPTB0715 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB0715 IPR023753 FAD/NAD(P)-binding domain YPTB0715 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTB0716 IPR036288 Aconitase B, HEAT-like domain superfamily YPTB0716 IPR015933 Aconitase B, HEAT-like domain YPTB0716 IPR015929 Aconitase B, swivel YPTB0716 IPR036008 Aconitase, iron-sulfur domain YPTB0716 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTB0716 IPR015932 Aconitase, domain 2 YPTB0716 IPR004406 Aconitase B YPTB0716 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTB0716 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB0716 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTB0717 IPR008249 Uncharacterised protein family UPF0231 YPTB0718 IPR000620 EamA domain YPTB0719 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPTB0719 IPR016067 S-adenosylmethionine decarboxylase, core YPTB0719 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPTB0720 IPR001045 Spermidine/spermine synthases YPTB0720 IPR030373 Polyamine biosynthesis domain, conserved site YPTB0720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0720 IPR037163 Spermidine synthase, tetramerisation domain superfamily YPTB0720 IPR030374 Polyamine biosynthesis domain YPTB0720 IPR035246 Spermidine synthase, tetramerisation domain YPTB0721 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPTB0721 IPR038432 PulS/OutS-like superfamily YPTB0722 IPR008972 Cupredoxin YPTB0722 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB0722 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB0722 IPR002355 Multicopper oxidase, copper-binding site YPTB0722 IPR011706 Multicopper oxidase, type 2 YPTB0722 IPR001117 Multicopper oxidase, type 1 YPTB0722 IPR011707 Multicopper oxidase, type 3 YPTB0723 IPR000836 Phosphoribosyltransferase domain YPTB0723 IPR005904 Hypoxanthine phosphoribosyl transferase YPTB0723 IPR029057 Phosphoribosyltransferase-like YPTB0724 IPR036874 Carbonic anhydrase superfamily YPTB0724 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPTB0724 IPR001765 Carbonic anhydrase YPTB0725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0725 IPR017871 ABC transporter, conserved site YPTB0725 IPR003439 ABC transporter-like YPTB0725 IPR003593 AAA+ ATPase domain YPTB0726 IPR013525 ABC-2 type transporter YPTB0726 IPR000412 ABC-2 transporter YPTB0727 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB0727 IPR002509 NodB homology domain YPTB0728 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB0728 IPR003190 Aspartate decarboxylase YPTB0729 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0729 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain YPTB0729 IPR003721 Pantoate-beta-alanine ligase YPTB0730 IPR003700 Ketopantoate hydroxymethyltransferase YPTB0730 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB0730 IPR040442 Pyruvate kinase-like domain superfamily YPTB0731 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPTB0731 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily YPTB0732 IPR002646 Poly A polymerase, head domain YPTB0732 IPR010206 Poly(A) polymerase I YPTB0732 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTB0732 IPR025866 Polymerase A arginine-rich C-terminal domain YPTB0733 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTB0733 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTB0733 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0733 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPTB0734 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPTB0734 IPR037187 DksA, N-terminal domain superfamily YPTB0734 IPR012784 RNA polymerase-binding transcription factor DksA YPTB0734 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPTB0734 IPR000962 Zinc finger, DksA/TraR C4-type YPTB0735 IPR005224 Sugar fermentation stimulation protein YPTB0735 IPR040452 Sugar fermentation stimulation protein, C-terminal YPTB0735 IPR041465 SfsA, N-terminal OB domain YPTB0736 IPR014051 Phosphoesterase, HXTX YPTB0736 IPR009097 Cyclic phosphodiesterase YPTB0736 IPR004175 RNA 2',3'-cyclic phosphodiesterase YPTB0737 IPR010225 ATP-dependent helicase HrpB YPTB0737 IPR011545 DEAD/DEAH box helicase domain YPTB0737 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPTB0737 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0737 IPR007502 Helicase-associated domain YPTB0737 IPR001650 Helicase, C-terminal YPTB0737 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB0738 IPR001264 Glycosyl transferase, family 51 YPTB0738 IPR028166 Bifunctional transglycosylase second domain YPTB0738 IPR012338 Beta-lactamase/transpeptidase-like YPTB0738 IPR001460 Penicillin-binding protein, transpeptidase YPTB0738 IPR036950 Penicillin binding protein transglycosylase domain YPTB0738 IPR011813 Penicillin-binding protein 1B YPTB0738 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPTB0738 IPR023346 Lysozyme-like domain superfamily YPTB0739 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0739 IPR017871 ABC transporter, conserved site YPTB0739 IPR003593 AAA+ ATPase domain YPTB0739 IPR003439 ABC transporter-like YPTB0740 IPR002491 ABC transporter periplasmic binding domain YPTB0741 IPR000522 ABC transporter, permease protein, BtuC-like YPTB0741 IPR037294 ABC transporter, BtuC-like YPTB0742 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPTB0742 IPR005814 Aminotransferase class-III YPTB0742 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0742 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0742 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0743 IPR001807 Chloride channel, voltage gated YPTB0743 IPR023861 Chloride channel, ClcA YPTB0743 IPR014743 Chloride channel, core YPTB0744 IPR023063 FeS cluster insertion protein ErpA YPTB0744 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB0744 IPR016092 FeS cluster insertion protein YPTB0744 IPR035903 HesB-like domain superfamily YPTB0744 IPR000361 FeS cluster biogenesis YPTB0745 IPR005115 Uncharacterised domain UPF0126 YPTB0746 IPR002491 ABC transporter periplasmic binding domain YPTB0746 IPR023544 ABC transporter, vitamin B12-binding protein YPTB0747 IPR010049 MTA/SAH nucleosidase YPTB0747 IPR000845 Nucleoside phosphorylase domain YPTB0747 IPR035994 Nucleoside phosphorylase superfamily YPTB0748 IPR006674 HD domain YPTB0748 IPR003607 HD/PDEase domain YPTB0748 IPR020779 dNTP triphosphohydrolase, type 1 YPTB0748 IPR026875 Phosphohydrolase-associated domain YPTB0748 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily YPTB0748 IPR006261 dNTP triphosphohydrolase YPTB0749 IPR001940 Peptidase S1C YPTB0749 IPR011782 Peptidase S1C, Do YPTB0749 IPR036034 PDZ superfamily YPTB0749 IPR001478 PDZ domain YPTB0749 IPR009003 Peptidase S1, PA clan YPTB0750 IPR011006 CheY-like superfamily YPTB0750 IPR001789 Signal transduction response regulator, receiver domain YPTB0750 IPR003660 HAMP domain YPTB0750 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB0750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0750 IPR005467 Histidine kinase domain YPTB0750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0750 IPR019247 Histidine kinase BarA, N-terminal YPTB0750 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0750 IPR036641 HPT domain superfamily YPTB0751 IPR003607 HD/PDEase domain YPTB0751 IPR004811 RelA/SpoT family YPTB0751 IPR007685 RelA/SpoT YPTB0751 IPR004095 TGS YPTB0751 IPR012676 TGS-like YPTB0751 IPR033655 RelA, TGS domain YPTB0751 IPR012675 Beta-grasp domain superfamily YPTB0751 IPR002912 ACT domain YPTB0753 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPTB0753 IPR011551 NTP pyrophosphohydrolase MazG YPTB0754 IPR017456 CTP synthase, N-terminal YPTB0754 IPR017926 Glutamine amidotransferase YPTB0754 IPR033828 CTP synthase GATase domain YPTB0754 IPR004468 CTP synthase YPTB0754 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0754 IPR029062 Class I glutamine amidotransferase-like YPTB0755 IPR020809 Enolase, conserved site YPTB0755 IPR020810 Enolase, C-terminal TIM barrel domain YPTB0755 IPR000941 Enolase YPTB0755 IPR036849 Enolase-like, C-terminal domain superfamily YPTB0755 IPR029017 Enolase-like, N-terminal YPTB0755 IPR020811 Enolase, N-terminal YPTB0756 IPR001424 Superoxide dismutase, copper/zinc binding domain YPTB0756 IPR018152 Superoxide dismutase, copper/zinc, binding site YPTB0756 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone YPTB0756 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily YPTB0757 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPTB0757 IPR007197 Radical SAM YPTB0757 IPR013785 Aldolase-type TIM barrel YPTB0757 IPR024924 7-carboxy-7-deazaguanine synthase-like YPTB0758 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family YPTB0758 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily YPTB0759 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTB0759 IPR017938 Riboflavin synthase-like beta-barrel YPTB0759 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB0759 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily YPTB0759 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB0759 IPR029039 Flavoprotein-like superfamily YPTB0759 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding YPTB0759 IPR008254 Flavodoxin/nitric oxide synthase YPTB0759 IPR001094 Flavodoxin-like YPTB0759 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB0759 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPTB0759 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPTB0760 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPTB0760 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPTB0760 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPTB0760 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPTB0760 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPTB0761 IPR011800 Phosphoadenosine phosphosulphate reductase CysH YPTB0761 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase YPTB0761 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0761 IPR002500 Phosphoadenosine phosphosulphate reductase YPTB0764 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTB0764 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTB0764 IPR006366 Uroporphyrin-III C-methyltransferase YPTB0764 IPR036291 NAD(P)-binding domain superfamily YPTB0764 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPTB0764 IPR012409 Sirohaem synthase YPTB0764 IPR028281 Siroheme synthase, central domain YPTB0764 IPR019478 Sirohaem synthase, dimerisation domain YPTB0764 IPR006367 Sirohaem synthase, N-terminal YPTB0764 IPR035996 Tetrapyrrole methylase superfamily YPTB0764 IPR000878 Tetrapyrrole methylase YPTB0764 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPTB0765 IPR002500 Phosphoadenosine phosphosulphate reductase YPTB0765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0765 IPR011784 Sulphate adenylyltransferase, small subunit YPTB0766 IPR000795 Transcription factor, GTP-binding domain YPTB0766 IPR011779 Sulphate adenylyltransferase, large subunit YPTB0766 IPR005225 Small GTP-binding protein domain YPTB0766 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0766 IPR031157 Tr-type G domain, conserved site YPTB0766 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain YPTB0766 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0766 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB0767 IPR002891 Adenylyl-sulfate kinase YPTB0767 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0768 IPR022721 Protein of unknown function DUF3561 YPTB0769 IPR007060 Septum formation initiator FtsL/DivIC YPTB0769 IPR023081 Cell division protein FtsB YPTB0770 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPTB0770 IPR029044 Nucleotide-diphospho-sugar transferases YPTB0770 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPTB0770 IPR034683 Cytidylyltransferase IspD/TarI YPTB0771 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPTB0771 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPTB0771 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily YPTB0772 IPR020119 Pseudouridine synthase TruD, conserved site YPTB0772 IPR001656 Pseudouridine synthase, TruD YPTB0772 IPR042214 Pseudouridine synthase, TruD, catalytic domain YPTB0772 IPR011760 Pseudouridine synthase, TruD, insertion domain YPTB0772 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB0773 IPR036523 SurE-like phosphatase/nucleotidase superfamily YPTB0773 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPTB0773 IPR030048 Survival protein SurE YPTB0774 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPTB0774 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0775 IPR018392 LysM domain YPTB0775 IPR016047 Peptidase M23 YPTB0775 IPR036779 LysM domain superfamily YPTB0775 IPR011055 Duplicated hybrid motif YPTB0776 IPR007630 RNA polymerase sigma-70 region 4 YPTB0776 IPR009042 RNA polymerase sigma-70 region 1.2 YPTB0776 IPR000943 RNA polymerase sigma-70 YPTB0776 IPR014284 RNA polymerase sigma-70 like domain YPTB0776 IPR013325 RNA polymerase sigma factor, region 2 YPTB0776 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB0776 IPR012761 RNA polymerase sigma factor RpoS YPTB0776 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0776 IPR007624 RNA polymerase sigma-70 region 3 YPTB0776 IPR007627 RNA polymerase sigma-70 region 2 YPTB0777 IPR001207 Transposase, mutator type YPTB0778 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0778 IPR000432 DNA mismatch repair protein MutS, C-terminal YPTB0778 IPR017261 DNA mismatch repair protein MutS/MSH YPTB0778 IPR005748 DNA mismatch repair protein MutS YPTB0778 IPR007696 DNA mismatch repair protein MutS, core YPTB0778 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPTB0778 IPR036678 MutS, connector domain superfamily YPTB0778 IPR007860 DNA mismatch repair protein MutS, connector domain YPTB0778 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YPTB0778 IPR016151 DNA mismatch repair protein MutS, N-terminal YPTB0778 IPR007861 DNA mismatch repair protein MutS, clamp YPTB0779 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPTB0779 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily YPTB0779 IPR004785 Ribose 5-phosphate isomerase B YPTB0780 IPR020843 Polyketide synthase, enoylreductase domain YPTB0780 IPR011032 GroES-like superfamily YPTB0780 IPR013154 Alcohol dehydrogenase, N-terminal YPTB0780 IPR013149 Alcohol dehydrogenase, C-terminal YPTB0780 IPR036291 NAD(P)-binding domain superfamily YPTB0781 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB0781 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB0781 IPR036291 NAD(P)-binding domain superfamily YPTB0782 IPR004006 DhaK domain YPTB0783 IPR012737 Dihydroxyacetone kinase, subunit L YPTB0783 IPR004007 DhaL domain YPTB0783 IPR036117 DhaL domain superfamily YPTB0784 IPR037171 NagB/RpiA transferase-like YPTB0784 IPR011991 ArsR-like helix-turn-helix domain YPTB0784 IPR009057 Homeobox-like domain superfamily YPTB0784 IPR007324 Sugar-binding domain, putative YPTB0784 IPR025246 Transposase IS30-like HTH domain YPTB0785 IPR000802 Arsenical pump membrane protein, ArsB YPTB0786 IPR018334 ArsR-type transcription regulator, HTH motif YPTB0786 IPR001845 HTH ArsR-type DNA-binding domain YPTB0786 IPR011991 ArsR-like helix-turn-helix domain YPTB0786 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0786 IPR036390 Winged helix DNA-binding domain superfamily YPTB0789 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB0789 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTB0789 IPR018313 Solute-binding protein family 3, conserved site YPTB0790 IPR036909 Cytochrome c-like domain superfamily YPTB0790 IPR004852 Di-haem cytochrome c peroxidase YPTB0790 IPR025992 Haem-binding domain YPTB0790 IPR009056 Cytochrome c-like domain YPTB0792 IPR039426 Vitamin B12 transporter BtuB-like YPTB0792 IPR012910 TonB-dependent receptor, plug domain YPTB0792 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB0792 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB0792 IPR010916 TonB box, conserved site YPTB0792 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB0792 IPR010917 TonB-dependent receptor, conserved site YPTB0794 IPR036005 Creatinase/aminopeptidase-like YPTB0794 IPR000994 Peptidase M24 YPTB0794 IPR001714 Peptidase M24, methionine aminopeptidase YPTB0794 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPTB0796 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPTB0796 IPR020557 Fumarate lyase, conserved site YPTB0796 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPTB0796 IPR011167 Iron-dependent fumarate hydratase YPTB0796 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily YPTB0797 IPR000577 Carbohydrate kinase, FGGY YPTB0797 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB0797 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB0797 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTB0798 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB0798 IPR001719 AP endonuclease 2 YPTB0798 IPR004560 L-ribulose-5-phosphate 3-epimerase YPTB0798 IPR036237 Xylose isomerase-like superfamily YPTB0799 IPR001851 ABC transporter, permease YPTB0800 IPR001851 ABC transporter, permease YPTB0801 IPR003593 AAA+ ATPase domain YPTB0801 IPR003439 ABC transporter-like YPTB0801 IPR015861 ABC transporter, ribose import, RbsA YPTB0801 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0801 IPR017871 ABC transporter, conserved site YPTB0803 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB0803 IPR001034 DeoR-type HTH domain YPTB0803 IPR036390 Winged helix DNA-binding domain superfamily YPTB0803 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0803 IPR037171 NagB/RpiA transferase-like YPTB0803 IPR014036 DeoR C-terminal sensor domain YPTB0804 IPR001303 Class II aldolase/adducin N-terminal YPTB0804 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTB0804 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPTB0804 IPR004661 L-ribulose-5-phosphate 4-epimerase YPTB0805 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB0805 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB0805 IPR006657 Molybdopterin dinucleotide-binding domain YPTB0805 IPR006656 Molybdopterin oxidoreductase YPTB0805 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTB0805 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTB0805 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTB0805 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPTB0805 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB0806 IPR014297 Dimethylsulphoxide reductase, chain B YPTB0806 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB0806 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB0807 IPR007059 DMSO reductase anchor subunit (DmsC) YPTB0808 IPR026269 Tat proofreading chaperone DmsD-type YPTB0808 IPR028611 Tat proofreading chaperone DmsD YPTB0808 IPR020945 DMSO/Nitrate reductase chaperone YPTB0808 IPR036411 TorD-like superfamily YPTB0809 IPR016174 Di-haem cytochrome, transmembrane YPTB0809 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTB0810 IPR009155 Cytochrome b562 YPTB0810 IPR010980 Cytochrome c/b562 YPTB0811 IPR000763 Catalase-peroxidase haem YPTB0811 IPR002016 Haem peroxidase YPTB0811 IPR019794 Peroxidase, active site YPTB0811 IPR010255 Haem peroxidase superfamily YPTB0811 IPR019793 Peroxidases heam-ligand binding site YPTB0814 IPR003593 AAA+ ATPase domain YPTB0814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0814 IPR003439 ABC transporter-like YPTB0814 IPR017871 ABC transporter, conserved site YPTB0814 IPR015861 ABC transporter, ribose import, RbsA YPTB0815 IPR001851 ABC transporter, permease YPTB0816 IPR029061 Thiamin diphosphate-binding fold YPTB0816 IPR005474 Transketolase, N-terminal YPTB0817 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTB0817 IPR033248 Transketolase, C-terminal domain YPTB0817 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB0817 IPR029061 Thiamin diphosphate-binding fold YPTB0818 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB0818 IPR042016 Apulose kinase YPTB0818 IPR000577 Carbohydrate kinase, FGGY YPTB0818 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB0821 IPR023745 MSF-type transporter, YcaD YPTB0821 IPR036259 MFS transporter superfamily YPTB0821 IPR020846 Major facilitator superfamily domain YPTB0821 IPR011701 Major facilitator superfamily YPTB0822 IPR036653 CinA-like, C-terminal YPTB0822 IPR008136 CinA, C-terminal YPTB0823 IPR020584 DNA recombination/repair protein RecA, conserved site YPTB0823 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0823 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPTB0823 IPR023400 DNA recombination and repair protein RecA, C-terminal YPTB0823 IPR013765 DNA recombination and repair protein RecA YPTB0823 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface YPTB0823 IPR003593 AAA+ ATPase domain YPTB0824 IPR003783 Regulatory protein RecX YPTB0824 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0825 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPTB0825 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0825 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPTB0825 IPR003156 DHHA1 domain YPTB0825 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPTB0825 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPTB0825 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain YPTB0825 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily YPTB0825 IPR002318 Alanine-tRNA ligase, class IIc YPTB0826 IPR036107 Carbon storage regulator superfamily YPTB0826 IPR003751 Translational regulator CsrA YPTB0827 IPR041492 Haloacid dehalogenase-like hydrolase YPTB0827 IPR006439 HAD hydrolase, subfamily IA YPTB0827 IPR036412 HAD-like superfamily YPTB0827 IPR010976 Beta-phosphoglucomutase hydrolase YPTB0827 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB0827 IPR023214 HAD superfamily YPTB0828 IPR032816 SNARE associated Golgi protein YPTB0829 IPR006334 Glutamate--cysteine ligase, monofunctional YPTB0829 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPTB0829 IPR007370 Glutamate--cysteine ligase YPTB0830 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily YPTB0830 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTB0830 IPR003815 S-ribosylhomocysteinase (LuxS) YPTB0831 IPR002550 CNNM, transmembrane domain YPTB0831 IPR036318 FAD-binding, type PCMH-like superfamily YPTB0831 IPR000644 CBS domain YPTB0831 IPR005170 Transporter-associated domain YPTB0831 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB0832 IPR002541 Cytochrome c assembly protein YPTB0833 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTB0833 IPR004780 Signal recognition particle protein YPTB0833 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPTB0833 IPR013822 Signal recognition particle SRP54, helical bundle YPTB0833 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily YPTB0833 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0833 IPR003593 AAA+ ATPase domain YPTB0833 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTB0833 IPR022941 Signal recognition particle, SRP54 subunit YPTB0834 IPR023803 Ribosomal protein S16 domain superfamily YPTB0834 IPR000307 Ribosomal protein S16 YPTB0834 IPR020592 Ribosomal protein S16, conserved site YPTB0835 IPR011033 PRC-barrel-like superfamily YPTB0835 IPR011961 16S rRNA processing protein RimM YPTB0835 IPR009000 Translation protein, beta-barrel domain superfamily YPTB0835 IPR036976 RimM, N-terminal domain superfamily YPTB0835 IPR002676 RimM, N-terminal YPTB0835 IPR027275 PRC-barrel domain YPTB0836 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPTB0836 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPTB0836 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPTB0836 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB0836 IPR029028 Alpha/beta knot methyltransferases YPTB0837 IPR018257 Ribosomal protein L19, conserved site YPTB0837 IPR038657 Ribosomal protein L19 superfamily YPTB0837 IPR008991 Translation protein SH3-like domain superfamily YPTB0837 IPR001857 Ribosomal protein L19 YPTB0838 IPR007433 Protein of unknown function DUF481 YPTB0839 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPTB0840 IPR011006 CheY-like superfamily YPTB0840 IPR007492 LytTR DNA-binding domain YPTB0840 IPR001789 Signal transduction response regulator, receiver domain YPTB0841 IPR013785 Aldolase-type TIM barrel YPTB0841 IPR006218 DAHP synthetase I/KDSA YPTB0841 IPR006219 DHAP synthase, class 1 YPTB0842 IPR036263 Chorismate mutase type II superfamily YPTB0842 IPR036979 Chorismate mutase domain superfamily YPTB0842 IPR003099 Prephenate dehydrogenase YPTB0842 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPTB0842 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0842 IPR011277 Chorismate mutase, T-protein YPTB0842 IPR002701 Chorismate mutase II, prokaryotic-type YPTB0842 IPR036291 NAD(P)-binding domain superfamily YPTB0843 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase YPTB0843 IPR036263 Chorismate mutase type II superfamily YPTB0843 IPR036979 Chorismate mutase domain superfamily YPTB0843 IPR002701 Chorismate mutase II, prokaryotic-type YPTB0843 IPR010952 Chorismate mutase, gammaproteobacteria YPTB0843 IPR001086 Prephenate dehydratase YPTB0843 IPR018528 Prephenate dehydratase, conserved site YPTB0843 IPR002912 ACT domain YPTB0844 IPR003489 Ribosome hibernation promoting factor/RaiA YPTB0844 IPR036567 Ribosome hibernation promotion factor-like YPTB0845 IPR039565 Outer membrane lipoprotein BamD-like YPTB0845 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB0845 IPR017689 Outer membrane protein assembly factor BamD YPTB0846 IPR036986 RNA-binding S4 domain superfamily YPTB0846 IPR002942 RNA-binding S4 domain YPTB0846 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB0846 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTB0846 IPR006225 Pseudouridine synthase, RluC/RluD YPTB0846 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB0848 IPR017730 Chaperonin ClpB YPTB0848 IPR003593 AAA+ ATPase domain YPTB0848 IPR003959 ATPase, AAA-type, core YPTB0848 IPR019489 Clp ATPase, C-terminal YPTB0848 IPR041546 ClpA/ClpB, AAA lid domain YPTB0848 IPR036628 Clp, N-terminal domain superfamily YPTB0848 IPR004176 Clp, N-terminal YPTB0848 IPR001270 ClpA/B family YPTB0848 IPR018368 ClpA/B, conserved site 1 YPTB0848 IPR028299 ClpA/B, conserved site 2 YPTB0848 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0849 IPR017028 Uncharacterised conserved protein UCP034456 YPTB0849 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPTB0850 IPR016270 CDP-alcohol phosphatidyltransferase class-II family YPTB0850 IPR025202 Phospholipase D-like domain YPTB0850 IPR001736 Phospholipase D/Transphosphatidylase YPTB0851 IPR016181 Acyl-CoA N-acyltransferase YPTB0851 IPR011761 ATP-grasp fold YPTB0851 IPR016102 Succinyl-CoA synthetase-like YPTB0851 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPTB0851 IPR036291 NAD(P)-binding domain superfamily YPTB0851 IPR000182 GNAT domain YPTB0851 IPR003781 CoA-binding YPTB0851 IPR013815 ATP-grasp fold, subdomain 1 YPTB0853 IPR013766 Thioredoxin domain YPTB0853 IPR017937 Thioredoxin, conserved site YPTB0853 IPR036249 Thioredoxin-like superfamily YPTB0853 IPR005746 Thioredoxin YPTB0854 IPR004441 RNA methyltransferase TrmH family YPTB0854 IPR029064 50S ribosomal protein L30e-like YPTB0854 IPR029028 Alpha/beta knot methyltransferases YPTB0854 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB0854 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPTB0854 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTB0854 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPTB0855 IPR011701 Major facilitator superfamily YPTB0855 IPR020846 Major facilitator superfamily domain YPTB0855 IPR036259 MFS transporter superfamily YPTB0855 IPR004638 Drug resistance transporter EmrB-like YPTB0856 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB0856 IPR005694 Efflux pump membrane protein YPTB0857 IPR000835 MarR-type HTH domain YPTB0857 IPR023187 Transcriptional regulator MarR-type, conserved site YPTB0857 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0857 IPR036390 Winged helix DNA-binding domain superfamily YPTB0858 IPR008407 Branched-chain amino acid transport, AzlD YPTB0859 IPR011606 Branched-chain amino acid transport, permease YPTB0860 IPR011701 Major facilitator superfamily YPTB0860 IPR036259 MFS transporter superfamily YPTB0860 IPR020846 Major facilitator superfamily domain YPTB0862 IPR023631 Amidase signature domain YPTB0862 IPR014087 1-carboxybiuret hydrolase, AtzE subunit YPTB0862 IPR036928 Amidase signature (AS) superfamily YPTB0862 IPR000120 Amidase YPTB0866 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB0866 IPR018313 Solute-binding protein family 3, conserved site YPTB0866 IPR037298 Cyclohexadienyl dehydratase pheC YPTB0867 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB0867 IPR035906 MetI-like superfamily YPTB0867 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB0869 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTB0869 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0869 IPR017871 ABC transporter, conserved site YPTB0869 IPR003439 ABC transporter-like YPTB0869 IPR003593 AAA+ ATPase domain YPTB0870 IPR000192 Aminotransferase class V domain YPTB0870 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0870 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase YPTB0870 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB0871 IPR002933 Peptidase M20 YPTB0871 IPR010158 Amidase, carbamoylase-type YPTB0871 IPR011650 Peptidase M20, dimerisation domain YPTB0871 IPR036264 Bacterial exopeptidase dimerisation domain YPTB0872 IPR036526 Carbon-nitrogen hydrolase superfamily YPTB0872 IPR001110 Uncharacterised protein family UPF0012, conserved site YPTB0872 IPR003010 Carbon-nitrogen hydrolase YPTB0873 IPR004839 Aminotransferase, class I/classII YPTB0873 IPR015424 Pyridoxal phosphate-dependent transferase YPTB0873 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB0873 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB0874 IPR017714 Methylthioribulose-1-phosphate dehydratase YPTB0874 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTB0874 IPR001303 Class II aldolase/adducin N-terminal YPTB0875 IPR006439 HAD hydrolase, subfamily IA YPTB0875 IPR023943 Enolase-phosphatase E1 YPTB0875 IPR023214 HAD superfamily YPTB0875 IPR036412 HAD-like superfamily YPTB0876 IPR004313 Acireductone dioxygenase ARD family YPTB0876 IPR014710 RmlC-like jelly roll fold YPTB0876 IPR011051 RmlC-like cupin domain superfamily YPTB0876 IPR023956 Acireductone dioxygenase ARD, bacteria YPTB0877 IPR000649 Initiation factor 2B-related YPTB0877 IPR037171 NagB/RpiA transferase-like YPTB0877 IPR005251 Methylthioribose-1-phosphate isomerase YPTB0877 IPR011559 Initiation factor 2B alpha/beta/delta YPTB0877 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal YPTB0878 IPR009212 Methylthioribose kinase YPTB0878 IPR011009 Protein kinase-like domain superfamily YPTB0878 IPR002575 Aminoglycoside phosphotransferase YPTB0879 IPR034746 POTRA domain YPTB0879 IPR005565 Haemolysin activator HlyB, C-terminal YPTB0879 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB0880 IPR011050 Pectin lyase fold/virulence factor YPTB0880 IPR012334 Pectin lyase fold YPTB0880 IPR008638 Filamentous haemagglutinin, N-terminal YPTB0881 IPR040542 HMW1 domain 2 YPTB0881 IPR041109 HMW1C N-terminal YPTB0883 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTB0883 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPTB0883 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPTB0883 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTB0883 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPTB0883 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTB0884 IPR004515 Phosphoheptose isomerase YPTB0884 IPR035461 GmhA/DiaA YPTB0884 IPR001347 Sugar isomerase (SIS) YPTB0885 IPR026869 Putative glutamine amidotransferase type 2 YPTB0885 IPR017932 Glutamine amidotransferase type 2 domain YPTB0885 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB0886 IPR005490 L,D-transpeptidase catalytic domain YPTB0886 IPR038063 L,D-transpeptidase catalytic domain-like YPTB0887 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A YPTB0887 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain YPTB0888 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPTB0888 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B YPTB0889 IPR007329 FMN-binding YPTB0889 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C YPTB0890 IPR003667 NqrDE/RnfAE YPTB0890 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D YPTB0891 IPR003667 NqrDE/RnfAE YPTB0891 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPTB0892 IPR017938 Riboflavin synthase-like beta-barrel YPTB0892 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB0892 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F YPTB0892 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB0892 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTB0892 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB0892 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB0892 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB0892 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB0892 IPR012675 Beta-grasp domain superfamily YPTB0893 IPR024932 Flavin transferase ApbE YPTB0893 IPR042159 Flavin-trafficking protein ApbE YPTB0893 IPR003374 ApbE-like superfamily YPTB0895 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTB0895 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTB0896 IPR001126 UmuC domain YPTB0896 IPR022880 DNA polymerase IV YPTB0896 IPR017961 DNA polymerase, Y-family, little finger domain YPTB0896 IPR024728 DNA polymerase type-Y, HhH motif YPTB0896 IPR036775 DNA polymerase, Y-family, little finger domain superfamily YPTB0897 IPR011650 Peptidase M20, dimerisation domain YPTB0897 IPR002933 Peptidase M20 YPTB0897 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPTB0898 IPR000847 Transcription regulator HTH, LysR YPTB0898 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0898 IPR036390 Winged helix DNA-binding domain superfamily YPTB0898 IPR005119 LysR, substrate-binding YPTB0901 IPR023747 Xanthine-guanine phosphoribosyltransferase YPTB0901 IPR029057 Phosphoribosyltransferase-like YPTB0901 IPR000836 Phosphoribosyltransferase domain YPTB0903 IPR009986 Sigma factor-binding transcriptional regulator Crl YPTB0903 IPR038208 Sigma factor-binding protein Crl superfamily YPTB0904 IPR041739 Glutamate-5-kinase domain YPTB0904 IPR001057 Glutamate/acetylglutamate kinase YPTB0904 IPR011529 Glutamate 5-kinase YPTB0904 IPR036393 Acetylglutamate kinase-like superfamily YPTB0904 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPTB0904 IPR002478 PUA domain YPTB0904 IPR015947 PUA-like superfamily YPTB0904 IPR036974 PUA domain superfamily YPTB0904 IPR019797 Glutamate 5-kinase, conserved site YPTB0904 IPR001048 Aspartate/glutamate/uridylate kinase YPTB0905 IPR000965 GPR domain YPTB0905 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPTB0905 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPTB0905 IPR015590 Aldehyde dehydrogenase domain YPTB0905 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB0905 IPR016161 Aldehyde/histidinol dehydrogenase YPTB0905 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB0906 IPR009875 PilZ domain YPTB0906 IPR023787 Type III secretion system flagellar brake protein YcgR YPTB0906 IPR012349 FMN-binding split barrel YPTB0906 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPTB0908 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB0908 IPR013216 Methyltransferase type 11 YPTB0911 IPR027544 Shikimate kinase 2 YPTB0911 IPR023000 Shikimate kinase, conserved site YPTB0911 IPR031322 Shikimate kinase/gluconokinase YPTB0911 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0911 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPTB0912 IPR014710 RmlC-like jelly roll fold YPTB0912 IPR011051 RmlC-like cupin domain superfamily YPTB0912 IPR009664 Pyrimidine/purine nucleoside phosphorylase YPTB0913 IPR007476 Putative exonuclease, RdgC YPTB0914 IPR000600 ROK family YPTB0915 IPR038729 Rad50/SbcC-type AAA domain YPTB0915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0915 IPR004592 Nuclease SbcC, gammaproteobacteria type YPTB0916 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPTB0916 IPR004593 Nuclease SbcCD subunit D YPTB0916 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain YPTB0916 IPR029052 Metallo-dependent phosphatase-like YPTB0916 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTB0917 IPR001789 Signal transduction response regulator, receiver domain YPTB0917 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0917 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB0917 IPR011006 CheY-like superfamily YPTB0917 IPR039420 Transcriptional regulatory protein WalR-like YPTB0917 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPTB0918 IPR005467 Histidine kinase domain YPTB0918 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0918 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0918 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPTB0918 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB0918 IPR021766 Phosphate regulon sensor protein PhoR YPTB0918 IPR013767 PAS fold YPTB0918 IPR035965 PAS domain superfamily YPTB0918 IPR000014 PAS domain YPTB0918 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB0918 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB0919 IPR024370 PBP domain YPTB0919 IPR011862 Phosphate binding protein YPTB0920 IPR004685 Branched-chain amino acid transport system II carrier protein YPTB0921 IPR004840 Amino acid permease, conserved site YPTB0921 IPR004841 Amino acid permease/ SLC12A domain YPTB0922 IPR017069 Maltodextrin glucosidase YPTB0922 IPR014756 Immunoglobulin E-set YPTB0922 IPR017853 Glycoside hydrolase superfamily YPTB0922 IPR013780 Glycosyl hydrolase, all-beta YPTB0922 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPTB0922 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTB0923 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTB0923 IPR036291 NAD(P)-binding domain superfamily YPTB0923 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB0923 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB0924 IPR000101 Gamma-glutamyltranspeptidase YPTB0924 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB0925 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTB0925 IPR024706 Peroxiredoxin, AhpC-type YPTB0925 IPR036249 Thioredoxin-like superfamily YPTB0925 IPR013766 Thioredoxin domain YPTB0925 IPR019479 Peroxiredoxin, C-terminal YPTB0926 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPTB0926 IPR007431 Acyl carrier protein phosphodiesterase YPTB0927 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily YPTB0927 IPR042119 QueA, domain 2 YPTB0927 IPR042118 QueA, domain 1 YPTB0927 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPTB0928 IPR004803 tRNA-guanine transglycosylase YPTB0928 IPR002616 tRNA-guanine(15) transglycosylase-like YPTB0928 IPR036511 Queuine tRNA-ribosyltransferase-like YPTB0929 IPR003849 Preprotein translocase YajC YPTB0930 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTB0930 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB0930 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTB0930 IPR027398 SecD export protein N-terminal TM domain YPTB0930 IPR005791 Protein translocase subunit SecD YPTB0931 IPR005665 Protein-export membrane protein SecF, bacterial YPTB0931 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTB0931 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTB0931 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTB0933 IPR003796 Ribonucleotide reductase regulator NrdR-like YPTB0933 IPR005144 ATP-cone domain YPTB0934 IPR004794 Riboflavin biosynthesis protein RibD YPTB0934 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPTB0934 IPR011549 Riboflavin-specific deaminase, C-terminal YPTB0934 IPR024072 Dihydrofolate reductase-like domain superfamily YPTB0934 IPR016193 Cytidine deaminase-like YPTB0934 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTB0934 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTB0935 IPR002180 Lumazine/riboflavin synthase YPTB0935 IPR036467 Lumazine/riboflavin synthase superfamily YPTB0935 IPR034964 Lumazine synthase YPTB0936 IPR035926 NusB-like superfamily YPTB0936 IPR011605 NusB antitermination factor YPTB0936 IPR006027 NusB/RsmB/TIM44 YPTB0937 IPR036676 PurM-like, C-terminal domain superfamily YPTB0937 IPR016188 PurM-like, N-terminal domain YPTB0937 IPR036921 PurM-like, N-terminal domain superfamily YPTB0937 IPR006283 Thiamine-monophosphate kinase YPTB0937 IPR010918 PurM-like, C-terminal domain YPTB0938 IPR036681 PgpA-like superfamily YPTB0938 IPR007686 YutG/PgpA domain YPTB0938 IPR026037 Phosphatidylglycerophosphatase A YPTB0939 IPR005477 Deoxyxylulose-5-phosphate synthase YPTB0939 IPR020826 Transketolase binding site YPTB0939 IPR033248 Transketolase, C-terminal domain YPTB0939 IPR029061 Thiamin diphosphate-binding fold YPTB0939 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB0939 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTB0939 IPR005474 Transketolase, N-terminal YPTB0940 IPR033749 Polyprenyl synthetase, conserved site YPTB0940 IPR000092 Polyprenyl synthetase YPTB0940 IPR008949 Isoprenoid synthase domain superfamily YPTB0941 IPR003761 Exonuclease VII, small subunit YPTB0941 IPR037004 Exonuclease VII, small subunit superfamily YPTB0943 IPR001763 Rhodanese-like domain YPTB0943 IPR036873 Rhodanese-like domain superfamily YPTB0943 IPR003720 tRNA sulfurtransferase ThiI YPTB0943 IPR004114 THUMP domain YPTB0943 IPR020536 Thil, AANH domain YPTB0943 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0943 IPR026340 Thiazole biosynthesis domain YPTB0944 IPR029062 Class I glutamine amidotransferase-like YPTB0944 IPR006287 Protein/nucleic acid deglycase DJ-1 YPTB0944 IPR002818 DJ-1/PfpI YPTB0945 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB0945 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB0945 IPR003710 Ketopantoate reductase ApbA/PanE YPTB0945 IPR013752 Ketopantoate reductase, C-terminal domain YPTB0945 IPR013332 Ketopantoate reductase, N-terminal domain YPTB0945 IPR036291 NAD(P)-binding domain superfamily YPTB0946 IPR007551 Protein of unknown function DUF520 YPTB0946 IPR036183 YajQ-like superfamily YPTB0946 IPR035571 UPF0234-like, C-terminal YPTB0946 IPR035570 UPF0234, N-terminal YPTB0947 IPR011701 Major facilitator superfamily YPTB0947 IPR020846 Major facilitator superfamily domain YPTB0947 IPR036259 MFS transporter superfamily YPTB0948 IPR000537 UbiA prenyltransferase family YPTB0948 IPR030470 UbiA prenyltransferase conserved site YPTB0948 IPR006369 Protohaem IX farnesyltransferase YPTB0949 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPTB0949 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPTB0950 IPR035973 Cytochrome c oxidase subunit III-like superfamily YPTB0950 IPR000298 Cytochrome c oxidase subunit III-like YPTB0950 IPR024791 Cytochrome c oxidase subunit III YPTB0950 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPTB0950 IPR033946 Ubiquinol oxidase subunit III domain YPTB0950 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPTB0951 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPTB0951 IPR023616 Cytochrome c oxidase-like, subunit I domain YPTB0951 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPTB0951 IPR000883 Cytochrome c oxidase subunit I YPTB0951 IPR036927 Cytochrome c oxidase-like, subunit I superfamily YPTB0952 IPR002429 Cytochrome c oxidase subunit II-like C-terminal YPTB0952 IPR010514 COX aromatic rich motif YPTB0952 IPR008972 Cupredoxin YPTB0952 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily YPTB0952 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain YPTB0952 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YPTB0952 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPTB0953 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily YPTB0953 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPTB0954 IPR020846 Major facilitator superfamily domain YPTB0954 IPR036259 MFS transporter superfamily YPTB0954 IPR011701 Major facilitator superfamily YPTB0954 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPTB0955 IPR012640 Membrane lipoprotein, lipid attachment site YPTB0955 IPR005619 Uncharacterised protein family, YajG YPTB0956 IPR002634 BolA protein YPTB0956 IPR036065 BolA-like superfamily YPTB0958 IPR027304 Trigger factor/SurA domain superfamily YPTB0958 IPR008881 Trigger factor, ribosome-binding, bacterial YPTB0958 IPR037041 Trigger factor, C-terminal domain superfamily YPTB0958 IPR005215 Trigger factor YPTB0958 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTB0958 IPR036611 Trigger factor ribosome-binding domain superfamily YPTB0958 IPR008880 Trigger factor, C-terminal YPTB0959 IPR033135 ClpP, histidine active site YPTB0959 IPR001907 ATP-dependent Clp protease proteolytic subunit YPTB0959 IPR029045 ClpP/crotonase-like domain superfamily YPTB0959 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPTB0959 IPR018215 ClpP, Ser active site YPTB0960 IPR003593 AAA+ ATPase domain YPTB0960 IPR003959 ATPase, AAA-type, core YPTB0960 IPR038366 Zinc finger, ClpX C4-type superfamily YPTB0960 IPR019489 Clp ATPase, C-terminal YPTB0960 IPR010603 Zinc finger, ClpX C4-type YPTB0960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0960 IPR004487 Clp protease, ATP-binding subunit ClpX YPTB0961 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0961 IPR008269 Peptidase S16, Lon proteolytic domain YPTB0961 IPR003111 Lon, substrate-binding domain YPTB0961 IPR027065 Lon protease YPTB0961 IPR015947 PUA-like superfamily YPTB0961 IPR008268 Peptidase S16, active site YPTB0961 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0961 IPR027543 Lon protease, bacterial YPTB0961 IPR003959 ATPase, AAA-type, core YPTB0961 IPR003593 AAA+ ATPase domain YPTB0961 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB0961 IPR004815 Lon protease, bacterial/eukaryotic-type YPTB0962 IPR000119 Histone-like DNA-binding protein YPTB0962 IPR020816 Histone-like DNA-binding protein, conserved site YPTB0962 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTB0963 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTB0963 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPTB0963 IPR027304 Trigger factor/SurA domain superfamily YPTB0964 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPTB0964 IPR010994 RuvA domain 2-like YPTB0964 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTB0965 IPR029069 HotDog domain superfamily YPTB0965 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPTB0966 IPR018317 Queuosine biosynthesis protein QueC YPTB0966 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB0967 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTB0967 IPR039424 Solute-binding protein family 5 YPTB0967 IPR000914 Solute-binding protein family 5 domain YPTB0968 IPR023938 HMP-PP phosphatase YPTB0968 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTB0968 IPR036412 HAD-like superfamily YPTB0968 IPR000150 Cof family YPTB0968 IPR023214 HAD superfamily YPTB0969 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB0969 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB0969 IPR005859 Cysteine synthase CysK YPTB0969 IPR005856 Cysteine synthase YPTB0969 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTB0970 IPR000485 AsnC-type HTH domain YPTB0970 IPR036390 Winged helix DNA-binding domain superfamily YPTB0970 IPR011991 ArsR-like helix-turn-helix domain YPTB0970 IPR011008 Dimeric alpha-beta barrel YPTB0970 IPR019888 Transcription regulator AsnC-type YPTB0970 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB0970 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB0970 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0971 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB0971 IPR003439 ABC transporter-like YPTB0971 IPR017871 ABC transporter, conserved site YPTB0971 IPR039421 Type I protein exporter YPTB0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0971 IPR011527 ABC transporter type 1, transmembrane domain YPTB0971 IPR003593 AAA+ ATPase domain YPTB0972 IPR039421 Type I protein exporter YPTB0972 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0972 IPR017871 ABC transporter, conserved site YPTB0972 IPR003593 AAA+ ATPase domain YPTB0972 IPR011527 ABC transporter type 1, transmembrane domain YPTB0972 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB0972 IPR003439 ABC transporter-like YPTB0973 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB0973 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB0973 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPTB0973 IPR002187 Nitrogen regulatory protein PII YPTB0973 IPR017918 Nitrogen regulatory protein PII, conserved site YPTB0974 IPR018047 Ammonium transporter, conserved site YPTB0974 IPR024041 Ammonium transporter AmtB-like domain YPTB0974 IPR001905 Ammonium transporter YPTB0974 IPR029020 Ammonium/urea transporter YPTB0975 IPR003703 Acyl-CoA thioesterase YPTB0975 IPR029069 HotDog domain superfamily YPTB0976 IPR039366 YscW/ExsB YPTB0977 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTB0977 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB0977 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTB0978 IPR036666 HHA superfamily YPTB0978 IPR007985 Haemolysin expression modulating, HHA YPTB0979 IPR019693 Biofilm formation regulator YbaJ YPTB0981 IPR000473 Ribosomal protein L36 YPTB0981 IPR035977 Ribosomal protein L36 superfamily YPTB0982 IPR034704 L28p-like YPTB0982 IPR002150 Ribosomal protein L31 YPTB0982 IPR027493 Ribosomal protein L31 type B YPTB0982 IPR042105 Ribosomal protein L31 superfamily YPTB0983 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB0983 IPR001036 Acriflavin resistance protein YPTB0983 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTB0984 IPR006143 RND efflux pump, membrane fusion protein YPTB0984 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB0985 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB0985 IPR001647 DNA-binding HTH domain, TetR-type YPTB0985 IPR009057 Homeobox-like domain superfamily YPTB0985 IPR013572 Transcription regulator MAATS, C-terminal YPTB0985 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB0986 IPR003787 Sulphur relay, DsrE/F-like protein YPTB0986 IPR027396 DsrEFH-like YPTB0987 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTB0987 IPR010920 LSM domain superfamily YPTB0987 IPR006685 Mechanosensitive ion channel MscS YPTB0987 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTB0987 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTB0987 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTB0987 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTB0987 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTB0987 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB0988 IPR019630 Protein of unknown function DUF2496, YbaM-related YPTB0990 IPR007401 Protein of unknown function DUF454 YPTB0991 IPR029057 Phosphoribosyltransferase-like YPTB0991 IPR000836 Phosphoribosyltransferase domain YPTB0991 IPR005764 Adenine phosphoribosyl transferase YPTB0992 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTB0992 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0992 IPR003593 AAA+ ATPase domain YPTB0992 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily YPTB0992 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPTB0992 IPR022754 DNA polymerase III, gamma subunit, domain III YPTB0992 IPR001270 ClpA/B family YPTB0992 IPR012763 DNA polymerase III, subunit gamma/ tau YPTB0992 IPR021029 DNA polymerase III, tau subunit, domain V YPTB0993 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTB0993 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YPTB0994 IPR023627 Recombination protein RecR YPTB0994 IPR000093 DNA recombination protein RecR YPTB0994 IPR015967 Recombination protein RecR, conserved site YPTB0994 IPR006171 TOPRIM domain YPTB0994 IPR034137 RecR, TOPRIM domain YPTB0994 IPR023628 Recombination protein RecR, C4-type zinc finger YPTB0995 IPR020575 Heat shock protein Hsp90, N-terminal YPTB0995 IPR001404 Heat shock protein Hsp90 family YPTB0995 IPR003594 Histidine kinase/HSP90-like ATPase YPTB0995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB0995 IPR019805 Heat shock protein Hsp90, conserved site YPTB0995 IPR037196 HSP90, C-terminal domain YPTB0995 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB0996 IPR006259 Adenylate kinase subfamily YPTB0996 IPR000850 Adenylate kinase/UMP-CMP kinase YPTB0996 IPR033690 Adenylate kinase, conserved site YPTB0996 IPR007862 Adenylate kinase, active site lid domain YPTB0996 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB0997 IPR033659 Ferrochelatase, N-terminal YPTB0997 IPR033644 Ferrochelatase, C-terminal YPTB0997 IPR019772 Ferrochelatase, active site YPTB0997 IPR001015 Ferrochelatase YPTB0998 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB0998 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB0998 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB0998 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB0998 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTB0998 IPR012675 Beta-grasp domain superfamily YPTB0998 IPR017938 Riboflavin synthase-like beta-barrel YPTB0998 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB0998 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB0999 IPR013446 Glucose-1-phosphate cytidylyltransferase YPTB0999 IPR029044 Nucleotide-diphospho-sugar transferases YPTB0999 IPR005835 Nucleotidyl transferase domain YPTB1000 IPR036291 NAD(P)-binding domain superfamily YPTB1000 IPR013445 CDP-glucose 4,6-dehydratase YPTB1000 IPR016040 NAD(P)-binding domain YPTB1001 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1001 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1001 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1001 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB1002 IPR001509 NAD-dependent epimerase/dehydratase YPTB1002 IPR036291 NAD(P)-binding domain superfamily YPTB1008 IPR001296 Glycosyl transferase, family 1 YPTB1008 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain YPTB1009 IPR016040 NAD(P)-binding domain YPTB1009 IPR006368 GDP-mannose 4,6-dehydratase YPTB1009 IPR036291 NAD(P)-binding domain superfamily YPTB1010 IPR001509 NAD-dependent epimerase/dehydratase YPTB1010 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase YPTB1010 IPR036291 NAD(P)-binding domain superfamily YPTB1011 IPR011051 RmlC-like cupin domain superfamily YPTB1011 IPR014710 RmlC-like jelly roll fold YPTB1011 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1011 IPR005835 Nucleotidyl transferase domain YPTB1011 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPTB1011 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPTB1012 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1012 IPR001173 Glycosyltransferase 2-like YPTB1013 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTB1013 IPR005841 Alpha-D-phosphohexomutase superfamily YPTB1013 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTB1013 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTB1013 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTB1013 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTB1013 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTB1013 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTB1014 IPR003856 Polysaccharide chain length determinant N-terminal domain YPTB1015 IPR011611 Carbohydrate kinase PfkB YPTB1015 IPR029056 Ribokinase-like YPTB1015 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB1016 IPR036291 NAD(P)-binding domain superfamily YPTB1016 IPR038770 Sodium/solute symporter superfamily YPTB1016 IPR003148 Regulator of K+ conductance, N-terminal YPTB1016 IPR004771 K+/H+ exchanger YPTB1016 IPR006153 Cation/H+ exchanger YPTB1017 IPR036259 MFS transporter superfamily YPTB1017 IPR020846 Major facilitator superfamily domain YPTB1017 IPR011701 Major facilitator superfamily YPTB1020 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPTB1020 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPTB1020 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPTB1021 IPR002816 TraB family YPTB1022 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB1022 IPR001757 P-type ATPase YPTB1022 IPR027256 P-type ATPase, subfamily IB YPTB1022 IPR036163 Heavy metal-associated domain superfamily YPTB1022 IPR006121 Heavy metal-associated domain, HMA YPTB1022 IPR017969 Heavy-metal-associated, conserved site YPTB1022 IPR036412 HAD-like superfamily YPTB1022 IPR023299 P-type ATPase, cytoplasmic domain N YPTB1022 IPR018303 P-type ATPase, phosphorylation site YPTB1022 IPR008250 P-type ATPase, A domain superfamily YPTB1022 IPR023214 HAD superfamily YPTB1023 IPR011789 Cu(I)-responsive transcriptional regulator YPTB1023 IPR009061 Putative DNA-binding domain superfamily YPTB1023 IPR000551 MerR-type HTH domain YPTB1024 IPR002810 NfeD-like, C-terminal domain YPTB1025 IPR001107 Band 7 domain YPTB1025 IPR036013 Band 7/SPFH domain superfamily YPTB1025 IPR018080 Band 7/stomatin-like, conserved site YPTB1025 IPR001972 Stomatin family YPTB1025 IPR032435 Band 7, C-terminal extension YPTB1026 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB1026 IPR013766 Thioredoxin domain YPTB1026 IPR036249 Thioredoxin-like superfamily YPTB1027 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1027 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1027 IPR036291 NAD(P)-binding domain superfamily YPTB1028 IPR013830 SGNH hydrolase-type esterase domain YPTB1028 IPR008265 Lipase, GDSL, active site YPTB1028 IPR036514 SGNH hydrolase superfamily YPTB1029 IPR017871 ABC transporter, conserved site YPTB1029 IPR003593 AAA+ ATPase domain YPTB1029 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1029 IPR003439 ABC transporter-like YPTB1030 IPR038766 Membrane component of ABC transporter, predicted YPTB1031 IPR011761 ATP-grasp fold YPTB1031 IPR016185 Pre-ATP-grasp domain superfamily YPTB1031 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPTB1031 IPR013815 ATP-grasp fold, subdomain 1 YPTB1031 IPR011054 Rudiment single hybrid motif YPTB1031 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPTB1031 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain YPTB1032 IPR035893 PurE domain superfamily YPTB1032 IPR024694 PurE, prokaryotic type YPTB1032 IPR000031 PurE domain YPTB1032 IPR033747 Class I PurE YPTB1033 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTB1033 IPR029052 Metallo-dependent phosphatase-like YPTB1033 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPTB1034 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPTB1034 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPTB1034 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPTB1034 IPR029000 Cyclophilin-like domain superfamily YPTB1035 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB1035 IPR032678 tRNA synthetases class I, catalytic domain YPTB1035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1035 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPTB1035 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPTB1035 IPR015803 Cysteine-tRNA ligase YPTB1036 IPR002942 RNA-binding S4 domain YPTB1036 IPR036986 RNA-binding S4 domain superfamily YPTB1037 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPTB1037 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPTB1037 IPR036291 NAD(P)-binding domain superfamily YPTB1037 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPTB1037 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPTB1044 IPR000462 CDP-alcohol phosphatidyltransferase YPTB1045 IPR000374 Phosphatidate cytidylyltransferase YPTB1046 IPR002123 Phospholipid/glycerol acyltransferase YPTB1046 IPR016676 Phospholipid/glycerol acyltransferase, predicted YPTB1047 IPR022742 Serine aminopeptidase, S33 YPTB1047 IPR022744 Methyltransferase domain, putative YPTB1047 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1047 IPR029058 Alpha/Beta hydrolase fold YPTB1048 IPR000340 Dual specificity phosphatase, catalytic domain YPTB1048 IPR020422 Dual specificity protein phosphatase domain YPTB1048 IPR016130 Protein-tyrosine phosphatase, active site YPTB1048 IPR000387 Tyrosine specific protein phosphatases domain YPTB1048 IPR003595 Protein-tyrosine phosphatase, catalytic YPTB1048 IPR029021 Protein-tyrosine phosphatase-like YPTB1051 IPR000847 Transcription regulator HTH, LysR YPTB1051 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1051 IPR036390 Winged helix DNA-binding domain superfamily YPTB1051 IPR005119 LysR, substrate-binding YPTB1052 IPR023210 NADP-dependent oxidoreductase domain YPTB1052 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB1052 IPR020471 Aldo/keto reductase YPTB1053 IPR023210 NADP-dependent oxidoreductase domain YPTB1053 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB1053 IPR018170 Aldo/keto reductase, conserved site YPTB1053 IPR020471 Aldo/keto reductase YPTB1058 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTB1058 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB1058 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTB1058 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB1058 IPR002942 RNA-binding S4 domain YPTB1058 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTB1058 IPR036986 RNA-binding S4 domain superfamily YPTB1059 IPR003347 JmjC domain YPTB1059 IPR039994 JmjC domain-containing YPTB1061 IPR030930 Adhesin of bacterial autotransporter system YPTB1061 IPR005546 Autotransporter beta-domain YPTB1061 IPR006315 Outer membrane autotransporter barrel YPTB1061 IPR036709 Autotransporter beta-domain superfamily YPTB1061 IPR024973 ESPR domain YPTB1061 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB1061 IPR011050 Pectin lyase fold/virulence factor YPTB1061 IPR004899 Pertactin, central region YPTB1061 IPR003991 Pertactin virulence factor family YPTB1064 IPR036624 Hcp1-like superfamily YPTB1064 IPR008514 Type VI secretion system effector, Hcp YPTB1067 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPTB1067 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB1068 IPR001460 Penicillin-binding protein, transpeptidase YPTB1068 IPR036950 Penicillin binding protein transglycosylase domain YPTB1068 IPR023346 Lysozyme-like domain superfamily YPTB1068 IPR012338 Beta-lactamase/transpeptidase-like YPTB1068 IPR011815 Penicillin-binding protein 1C YPTB1068 IPR001264 Glycosyl transferase, family 51 YPTB1068 IPR009647 Penicillin-binding, C-terminal YPTB1069 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain YPTB1069 IPR011625 Alpha-2-macroglobulin, bait region domain YPTB1069 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain YPTB1069 IPR001599 Alpha-2-macroglobulin YPTB1069 IPR021868 Alpha-2-macroglobulin MG3 domain YPTB1069 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPTB1069 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain YPTB1069 IPR002890 Macroglobulin domain YPTB1071 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1071 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1071 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPTB1071 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1071 IPR015590 Aldehyde dehydrogenase domain YPTB1071 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1072 IPR029061 Thiamin diphosphate-binding fold YPTB1072 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB1072 IPR000399 TPP-binding enzyme, conserved site YPTB1072 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB1072 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB1072 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase YPTB1072 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes YPTB1072 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTB1073 IPR036291 NAD(P)-binding domain superfamily YPTB1073 IPR030827 Inositol 2-dehydrogenase YPTB1073 IPR004104 Oxidoreductase, C-terminal YPTB1073 IPR000683 Oxidoreductase, N-terminal YPTB1074 IPR028082 Periplasmic binding protein-like I YPTB1074 IPR025997 Periplasmic binding protein YPTB1075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1075 IPR003439 ABC transporter-like YPTB1075 IPR017871 ABC transporter, conserved site YPTB1075 IPR003593 AAA+ ATPase domain YPTB1075 IPR015861 ABC transporter, ribose import, RbsA YPTB1076 IPR001851 ABC transporter, permease YPTB1077 IPR004104 Oxidoreductase, C-terminal YPTB1077 IPR000683 Oxidoreductase, N-terminal YPTB1077 IPR036291 NAD(P)-binding domain superfamily YPTB1077 IPR030827 Inositol 2-dehydrogenase YPTB1078 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily YPTB1078 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB1078 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes YPTB1078 IPR030830 5-Dehydro-2-deoxygluconokinase YPTB1078 IPR011611 Carbohydrate kinase PfkB YPTB1078 IPR029056 Ribokinase-like YPTB1079 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB1079 IPR030823 IolE/MocC family YPTB1079 IPR036237 Xylose isomerase-like superfamily YPTB1080 IPR011051 RmlC-like cupin domain superfamily YPTB1080 IPR014710 RmlC-like jelly roll fold YPTB1080 IPR021120 KduI/IolB isomerase YPTB1080 IPR023770 5-deoxy-glucuronate isomerase, Bacilli YPTB1080 IPR024203 5-deoxy-glucuronate isomerase, IolB YPTB1082 IPR003593 AAA+ ATPase domain YPTB1082 IPR011527 ABC transporter type 1, transmembrane domain YPTB1082 IPR003439 ABC transporter-like YPTB1082 IPR017871 ABC transporter, conserved site YPTB1082 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1082 IPR039421 Type I protein exporter YPTB1082 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1086 IPR000792 Transcription regulator LuxR, C-terminal YPTB1086 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1087 IPR012340 Nucleic acid-binding, OB-fold YPTB1087 IPR002059 Cold-shock protein, DNA-binding YPTB1087 IPR019844 Cold-shock (CSD) domain YPTB1087 IPR011129 Cold shock domain YPTB1087 IPR012156 Cold shock, CspA YPTB1088 IPR012340 Nucleic acid-binding, OB-fold YPTB1088 IPR002059 Cold-shock protein, DNA-binding YPTB1088 IPR012156 Cold shock, CspA YPTB1088 IPR019844 Cold-shock (CSD) domain YPTB1088 IPR011129 Cold shock domain YPTB1089 IPR003691 Putative fluoride ion transporter CrcB YPTB1090 IPR003369 Sec-independent protein translocase protein TatA/B/E YPTB1090 IPR024905 Sec-independent protein translocase protein TatE YPTB1090 IPR006312 Sec-independent protein translocase protein TatA/E YPTB1091 IPR013785 Aldolase-type TIM barrel YPTB1091 IPR031691 Lipoyl synthase, N-terminal YPTB1091 IPR003698 Lipoyl synthase YPTB1091 IPR006638 Elp3/MiaB/NifB YPTB1091 IPR007197 Radical SAM YPTB1092 IPR020605 Octanoyltransferase, conserved site YPTB1092 IPR000544 Octanoyltransferase YPTB1092 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTB1093 IPR027471 YbeD-like domain superfamily YPTB1093 IPR007454 Uncharacterised protein family UPF0250 YPTB1094 IPR012338 Beta-lactamase/transpeptidase-like YPTB1094 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPTB1094 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTB1094 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPTB1094 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTB1094 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPTB1095 IPR012997 Rare lipoprotein A YPTB1095 IPR036680 Sporulation-like domain superfamily YPTB1095 IPR007730 Sporulation-like domain YPTB1095 IPR034718 Endolytic peptidoglycan transglycosylase RlpA YPTB1095 IPR036908 RlpA-like domain superfamily YPTB1095 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTB1096 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB YPTB1096 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPTB1096 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPTB1097 IPR017790 Penicillin-binding protein 2 YPTB1097 IPR001460 Penicillin-binding protein, transpeptidase YPTB1097 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPTB1097 IPR012338 Beta-lactamase/transpeptidase-like YPTB1097 IPR005311 Penicillin-binding protein, dimerisation domain YPTB1098 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB1098 IPR003742 RNA methyltransferase RlmH YPTB1098 IPR029028 Alpha/beta knot methyltransferases YPTB1099 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPTB1100 IPR004821 Cytidyltransferase-like domain YPTB1100 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase YPTB1100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1101 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTB1101 IPR032780 DNA polymerase III subunit delta, C-terminal YPTB1101 IPR010372 DNA polymerase III delta, N-terminal YPTB1101 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1101 IPR005790 DNA polymerase III, delta subunit YPTB1102 IPR007485 LPS-assembly lipoprotein LptE YPTB1103 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1103 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTB1103 IPR025709 Leucyl-tRNA synthetase, editing domain YPTB1103 IPR002302 Leucine-tRNA ligase YPTB1103 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTB1103 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTB1103 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB1103 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB1104 IPR009912 Zinc-ribbon containing domain YPTB1105 IPR017871 ABC transporter, conserved site YPTB1105 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTB1105 IPR003593 AAA+ ATPase domain YPTB1105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1105 IPR003439 ABC transporter-like YPTB1106 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB1106 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM YPTB1106 IPR035906 MetI-like superfamily YPTB1106 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1107 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ YPTB1107 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB1107 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1107 IPR035906 MetI-like superfamily YPTB1108 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB1109 IPR003010 Carbon-nitrogen hydrolase YPTB1109 IPR036526 Carbon-nitrogen hydrolase superfamily YPTB1109 IPR004563 Apolipoprotein N-acyltransferase YPTB1110 IPR005170 Transporter-associated domain YPTB1110 IPR036318 FAD-binding, type PCMH-like superfamily YPTB1110 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB1110 IPR000644 CBS domain YPTB1111 IPR002036 Endoribonuclease YbeY YPTB1111 IPR023091 Metalloprotease catalytic domain superfamily, predicted YPTB1111 IPR020549 Endoribonuclease YbeY, conserved site YPTB1112 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1112 IPR003714 PhoH-like protein YPTB1113 IPR013848 Methylthiotransferase, N-terminal YPTB1113 IPR038135 Methylthiotransferase, N-terminal domain superfamily YPTB1113 IPR002792 TRAM domain YPTB1113 IPR005839 Methylthiotransferase YPTB1113 IPR020612 Methylthiotransferase, conserved site YPTB1113 IPR007197 Radical SAM YPTB1113 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB YPTB1113 IPR006638 Elp3/MiaB/NifB YPTB1113 IPR023404 Radical SAM, alpha/beta horseshoe YPTB1114 IPR002938 FAD-binding domain YPTB1114 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB1114 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTB1114 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTB1115 IPR017932 Glutamine amidotransferase type 2 domain YPTB1115 IPR033738 Asparagine synthase, N-terminal domain YPTB1115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1115 IPR001962 Asparagine synthase YPTB1115 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPTB1115 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB1116 IPR036412 HAD-like superfamily YPTB1116 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPTB1116 IPR023214 HAD superfamily YPTB1117 IPR000835 MarR-type HTH domain YPTB1117 IPR000600 ROK family YPTB1117 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1117 IPR036390 Winged helix DNA-binding domain superfamily YPTB1118 IPR032466 Metal-dependent hydrolase YPTB1118 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB1118 IPR006680 Amidohydrolase-related YPTB1118 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPTB1119 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPTB1119 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPTB1119 IPR004547 Glucosamine-6-phosphate isomerase YPTB1119 IPR037171 NagB/RpiA transferase-like YPTB1120 IPR011055 Duplicated hybrid motif YPTB1120 IPR036878 Glucose permease domain IIB YPTB1120 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTB1120 IPR003352 Phosphotransferase system, EIIC YPTB1120 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTB1120 IPR001996 Phosphotransferase system, IIB component, type 1 YPTB1120 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPTB1120 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPTB1121 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB1121 IPR004514 Glutamine-tRNA synthetase YPTB1121 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPTB1121 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTB1121 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPTB1121 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1121 IPR022861 Glutamine-tRNA ligase, bacterial YPTB1121 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTB1121 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPTB1121 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily YPTB1122 IPR005318 Outer membrane porin, bacterial YPTB1122 IPR023614 Porin domain superfamily YPTB1123 IPR012291 CBM2, carbohydrate-binding domain superfamily YPTB1123 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain YPTB1123 IPR004867 Chitobiase C-terminal domain YPTB1123 IPR013783 Immunoglobulin-like fold YPTB1123 IPR015883 Glycoside hydrolase family 20, catalytic domain YPTB1123 IPR029018 Beta-hexosaminidase-like, domain 2 YPTB1123 IPR025705 Beta-hexosaminidase YPTB1123 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily YPTB1123 IPR017853 Glycoside hydrolase superfamily YPTB1123 IPR014756 Immunoglobulin E-set YPTB1123 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YPTB1124 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1124 IPR002481 Ferric-uptake regulator YPTB1124 IPR036390 Winged helix DNA-binding domain superfamily YPTB1125 IPR008254 Flavodoxin/nitric oxide synthase YPTB1125 IPR029039 Flavoprotein-like superfamily YPTB1125 IPR010086 Flavodoxin, long chain YPTB1125 IPR001226 Flavodoxin, conserved site YPTB1127 IPR010985 Ribbon-helix-helix YPTB1127 IPR002145 Ribbon-helix-helix protein, CopG YPTB1128 IPR000073 Alpha/beta hydrolase fold-1 YPTB1128 IPR029058 Alpha/Beta hydrolase fold YPTB1130 IPR002514 Transposase IS3/IS911family YPTB1130 IPR009057 Homeobox-like domain superfamily YPTB1132 IPR012337 Ribonuclease H-like superfamily YPTB1132 IPR017894 HTH domain, IS21 transposase-type YPTB1132 IPR001584 Integrase, catalytic core YPTB1132 IPR036397 Ribonuclease H superfamily YPTB1132 IPR006120 Resolvase, HTH domain YPTB1133 IPR003593 AAA+ ATPase domain YPTB1133 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB1133 IPR002611 IstB-like ATP-binding protein YPTB1133 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1133 IPR001270 ClpA/B family YPTB1135 IPR020081 SsrA-binding protein, conserved site YPTB1135 IPR023620 Small protein B YPTB1135 IPR000037 SsrA-binding protein YPTB1136 IPR023393 START-like domain superfamily YPTB1136 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPTB1137 IPR037021 RnfH superfamily YPTB1137 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB1137 IPR005346 RnfH protein YPTB1138 IPR037873 BamE-like YPTB1138 IPR026592 Outer membrane protein assembly factor BamE YPTB1138 IPR007450 Lipoprotein SmpA/OmlA YPTB1139 IPR003395 RecF/RecN/SMC, N-terminal YPTB1139 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1139 IPR004604 DNA recombination/repair protein RecN YPTB1140 IPR002504 NAD kinase YPTB1140 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal YPTB1140 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPTB1140 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPTB1141 IPR009012 GrpE nucleotide exchange factor, head YPTB1141 IPR000740 GrpE nucleotide exchange factor YPTB1141 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPTB1142 IPR016142 Citrate synthase-like, large alpha subdomain YPTB1142 IPR002020 Citrate synthase YPTB1142 IPR019810 Citrate synthase active site YPTB1142 IPR024176 Citrate synthase, bacterial-type YPTB1142 IPR036969 Citrate synthase superfamily YPTB1142 IPR010953 Citrate synthase, type I YPTB1142 IPR016143 Citrate synthase-like, small alpha subdomain YPTB1143 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPTB1143 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPTB1143 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTB1143 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPTB1144 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPTB1144 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTB1144 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPTB1145 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB1145 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPTB1145 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTB1145 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTB1145 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTB1145 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB1145 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPTB1145 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPTB1146 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB1146 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPTB1146 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPTB1146 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB1146 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB1146 IPR009051 Alpha-helical ferredoxin YPTB1146 IPR012675 Beta-grasp domain superfamily YPTB1146 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB1147 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily YPTB1147 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain YPTB1147 IPR011603 2-oxoglutarate dehydrogenase E1 component YPTB1147 IPR001017 Dehydrogenase, E1 component YPTB1147 IPR029061 Thiamin diphosphate-binding fold YPTB1147 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal YPTB1147 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB1148 IPR004167 Peripheral subunit-binding domain YPTB1148 IPR011053 Single hybrid motif YPTB1148 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB1148 IPR000089 Biotin/lipoyl attachment YPTB1148 IPR036625 E3-binding domain superfamily YPTB1148 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB1148 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPTB1148 IPR006255 Dihydrolipoamide succinyltransferase YPTB1149 IPR005809 Succinate--CoA synthetase, beta subunit YPTB1149 IPR016102 Succinyl-CoA synthetase-like YPTB1149 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPTB1149 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPTB1149 IPR011761 ATP-grasp fold YPTB1149 IPR013815 ATP-grasp fold, subdomain 1 YPTB1149 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPTB1150 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YPTB1150 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPTB1150 IPR036291 NAD(P)-binding domain superfamily YPTB1150 IPR005810 Succinyl-CoA ligase, alpha subunit YPTB1150 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPTB1150 IPR016102 Succinyl-CoA synthetase-like YPTB1150 IPR003781 CoA-binding YPTB1151 IPR002585 Cytochrome ubiquinol oxidase subunit 1 YPTB1152 IPR003317 Cytochrome ubiquinol oxidase subunit 2 YPTB1153 IPR012994 Membrane bound YbgT-like YPTB1153 IPR011724 Cyd operon protein YbgT YPTB1154 IPR011846 Cyd operon protein YbgE YPTB1155 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPTB1155 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPTB1155 IPR006683 Thioesterase domain YPTB1155 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site YPTB1155 IPR029069 HotDog domain superfamily YPTB1156 IPR002898 MotA/TolQ/ExbB proton channel YPTB1156 IPR014163 Tol-Pal system, TolQ YPTB1157 IPR014168 Tol-Pal system protein TolR YPTB1157 IPR003400 Biopolymer transport protein ExbD/TolR YPTB1158 IPR014161 Tol-Pal system, TolA YPTB1158 IPR014161 Tol-Pal system, TolA YPTB1159 IPR011042 Six-bladed beta-propeller, TolB-like YPTB1159 IPR014167 Tol-Pal system protein TolB YPTB1159 IPR007195 TolB, N-terminal YPTB1159 IPR036752 TolB, N-terminal domain superfamily YPTB1159 IPR011659 WD40-like Beta Propeller YPTB1160 IPR006665 OmpA-like domain YPTB1160 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB1160 IPR006664 Outer membrane protein, bacterial YPTB1160 IPR039001 Peptidoglycan-associated lipoprotein YPTB1160 IPR036737 OmpA-like domain superfamily YPTB1160 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal YPTB1161 IPR032519 YbgF, trimerisation domain YPTB1161 IPR019734 Tetratricopeptide repeat YPTB1161 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB1161 IPR013026 Tetratricopeptide repeat-containing domain YPTB1161 IPR014162 Cell division coordinator CpoB, C-terminal YPTB1161 IPR034706 Cell division coordinator CpoB YPTB1162 IPR036094 Quinolinate synthetase A superfamily YPTB1162 IPR003473 Quinolinate synthetase A YPTB1162 IPR023513 Quinolinate synthase A, type 1 YPTB1163 IPR006419 Nicotinamide mononucleotide transporter PnuC YPTB1164 IPR023500 Zinc transporter ZitB YPTB1164 IPR027469 Cation efflux transmembrane domain superfamily YPTB1164 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPTB1164 IPR002524 Cation efflux protein YPTB1165 IPR013785 Aldolase-type TIM barrel YPTB1165 IPR006218 DAHP synthetase I/KDSA YPTB1165 IPR006219 DHAP synthase, class 1 YPTB1166 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB1166 IPR029033 Histidine phosphatase superfamily YPTB1166 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPTB1166 IPR005952 Phosphoglycerate mutase 1 YPTB1168 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPTB1168 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTB1168 IPR011013 Galactose mutarotase-like domain superfamily YPTB1168 IPR015443 Aldose 1-epimerase YPTB1168 IPR013458 Aldose 1-epimerase, bacterial YPTB1168 IPR018052 Aldose 1-epimerase, conserved site YPTB1169 IPR036554 GHMP kinase, C-terminal domain superfamily YPTB1169 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB1169 IPR013750 GHMP kinase, C-terminal domain YPTB1169 IPR019539 Galactokinase galactose-binding domain YPTB1169 IPR019741 Galactokinase, conserved site YPTB1169 IPR022963 Galactokinase, bacterial YPTB1169 IPR000705 Galactokinase YPTB1169 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB1169 IPR006204 GHMP kinase N-terminal domain YPTB1169 IPR006203 GHMP kinase, ATP-binding, conserved site YPTB1169 IPR006206 Mevalonate/galactokinase YPTB1170 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPTB1170 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPTB1170 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPTB1170 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPTB1170 IPR036265 HIT-like superfamily YPTB1171 IPR005886 UDP-glucose 4-epimerase YPTB1171 IPR036291 NAD(P)-binding domain superfamily YPTB1171 IPR016040 NAD(P)-binding domain YPTB1173 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1173 IPR003439 ABC transporter-like YPTB1173 IPR003593 AAA+ ATPase domain YPTB1174 IPR036390 Winged helix DNA-binding domain superfamily YPTB1174 IPR008995 Molybdate/tungstate binding, C-terminal YPTB1174 IPR005116 Transport-associated OB, type 1 YPTB1174 IPR000847 Transcription regulator HTH, LysR YPTB1174 IPR003725 Molybdenum-binding protein ModE, N-terminal YPTB1174 IPR004606 Molybdenum-pterin binding YPTB1174 IPR016462 Molybdate-dependent transcriptional regulator ModE YPTB1174 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1175 IPR019702 Multidrug efflux pump accessory protein AcrZ YPTB1176 IPR005950 Molybdate ABC transporter, substrate-binding protein YPTB1177 IPR011867 Molybdate ABC transporter, permease protein YPTB1177 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1177 IPR035906 MetI-like superfamily YPTB1178 IPR003593 AAA+ ATPase domain YPTB1178 IPR003439 ABC transporter-like YPTB1178 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1178 IPR017871 ABC transporter, conserved site YPTB1178 IPR015852 ABC transporter, molybdenum import, ModC YPTB1178 IPR008995 Molybdate/tungstate binding, C-terminal YPTB1178 IPR011868 Molybdate ABC transporter, ATP-binding protein YPTB1178 IPR004606 Molybdenum-pterin binding YPTB1178 IPR005116 Transport-associated OB, type 1 YPTB1179 IPR023214 HAD superfamily YPTB1179 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTB1179 IPR036412 HAD-like superfamily YPTB1179 IPR000150 Cof family YPTB1180 IPR022528 6-phosphogluconolactonase, YbhE-type YPTB1180 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTB1180 IPR011045 Nitrous oxide reductase, N-terminal YPTB1180 IPR019405 Lactonase, 7-bladed beta propeller YPTB1181 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1181 IPR005814 Aminotransferase class-III YPTB1181 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPTB1181 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1181 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1182 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPTB1182 IPR007197 Radical SAM YPTB1182 IPR006638 Elp3/MiaB/NifB YPTB1182 IPR024177 Biotin synthase YPTB1182 IPR013785 Aldolase-type TIM barrel YPTB1182 IPR010722 Biotin and thiamin synthesis-associated domain YPTB1183 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1183 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTB1183 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1183 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPTB1183 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1183 IPR004839 Aminotransferase, class I/classII YPTB1183 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPTB1184 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPTB1184 IPR013216 Methyltransferase type 11 YPTB1184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1185 IPR004472 Dethiobiotin synthase BioD YPTB1185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1187 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1187 IPR001650 Helicase, C-terminal YPTB1187 IPR006935 Helicase/UvrB, N-terminal YPTB1187 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB1187 IPR036876 UVR domain superfamily YPTB1187 IPR041471 UvrB, interaction domain YPTB1187 IPR004807 UvrABC system, subunit B YPTB1187 IPR001943 UVR domain YPTB1187 IPR024759 UvrB, YAD/RRR-motif-containing domain YPTB1188 IPR018668 DNA-binding protein VF530-like YPTB1188 IPR036361 SAP domain superfamily YPTB1189 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPTB1189 IPR038136 Gluconeogenesis factor superfamily YPTB1189 IPR010119 Gluconeogenesis factor YPTB1190 IPR013785 Aldolase-type TIM barrel YPTB1190 IPR007197 Radical SAM YPTB1190 IPR010505 Molybdenum cofactor synthesis C-terminal YPTB1190 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPTB1190 IPR013483 Molybdenum cofactor biosynthesis protein A YPTB1190 IPR006638 Elp3/MiaB/NifB YPTB1191 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPTB1191 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily YPTB1191 IPR023045 Molybdenum cofactor biosynthesis C YPTB1192 IPR003749 Sulfur carrier ThiS/MoaD-like YPTB1192 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTB1192 IPR012675 Beta-grasp domain superfamily YPTB1193 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily YPTB1193 IPR003448 Molybdopterin biosynthesis MoaE YPTB1194 IPR006214 Bax inhibitor 1-related YPTB1195 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB1195 IPR011533 Oxygen-dependent choline dehydrogenase YPTB1195 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPTB1195 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPTB1195 IPR027424 Glucose Oxidase, domain 2 YPTB1195 IPR012132 Glucose-methanol-choline oxidoreductase YPTB1196 IPR011264 Betaine aldehyde dehydrogenase YPTB1196 IPR015590 Aldehyde dehydrogenase domain YPTB1196 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1196 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1196 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB1196 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1196 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1197 IPR009057 Homeobox-like domain superfamily YPTB1197 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB1197 IPR001647 DNA-binding HTH domain, TetR-type YPTB1197 IPR017757 Transcriptional repressor BetI YPTB1197 IPR039538 BetI-type transcriptional repressor, C-terminal YPTB1197 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB1198 IPR018093 BCCT transporter, conserved site YPTB1198 IPR000060 BCCT transporter family YPTB1199 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain YPTB1199 IPR000847 Transcription regulator HTH, LysR YPTB1199 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1199 IPR036390 Winged helix DNA-binding domain superfamily YPTB1199 IPR005119 LysR, substrate-binding YPTB1201 IPR000845 Nucleoside phosphorylase domain YPTB1201 IPR035994 Nucleoside phosphorylase superfamily YPTB1201 IPR010943 Xanthosine phosphorylase YPTB1201 IPR011268 Purine nucleoside phosphorylase YPTB1201 IPR018099 Purine phosphorylase, family 2, conserved site YPTB1202 IPR020846 Major facilitator superfamily domain YPTB1202 IPR004740 Nucleoside:H+ symporter YPTB1202 IPR036259 MFS transporter superfamily YPTB1203 IPR025961 Heavy-metal resistance protein YPTB1204 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1204 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1204 IPR005467 Histidine kinase domain YPTB1204 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB1204 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB1204 IPR029151 Periplasmic sensor-like domain superfamily YPTB1204 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB1205 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB1205 IPR003593 AAA+ ATPase domain YPTB1205 IPR011006 CheY-like superfamily YPTB1205 IPR009057 Homeobox-like domain superfamily YPTB1205 IPR002197 DNA binding HTH domain, Fis-type YPTB1205 IPR025944 Sigma-54 interaction domain, conserved site YPTB1205 IPR001789 Signal transduction response regulator, receiver domain YPTB1205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1205 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB1205 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB1206 IPR013785 Aldolase-type TIM barrel YPTB1206 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTB1207 IPR005119 LysR, substrate-binding YPTB1207 IPR000847 Transcription regulator HTH, LysR YPTB1207 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1207 IPR036390 Winged helix DNA-binding domain superfamily YPTB1209 IPR000412 ABC-2 transporter YPTB1210 IPR000412 ABC-2 transporter YPTB1211 IPR017871 ABC transporter, conserved site YPTB1211 IPR003439 ABC transporter-like YPTB1211 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1211 IPR003593 AAA+ ATPase domain YPTB1212 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB1212 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPTB1213 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTB1213 IPR001647 DNA-binding HTH domain, TetR-type YPTB1213 IPR009057 Homeobox-like domain superfamily YPTB1213 IPR015292 Transcription regulator YbiH, C-terminal YPTB1213 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB1214 IPR014014 RNA helicase, DEAD-box type, Q motif YPTB1214 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1214 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB1214 IPR001650 Helicase, C-terminal YPTB1214 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB1214 IPR028622 ATP-dependent RNA helicase RhlE YPTB1214 IPR011545 DEAD/DEAH box helicase domain YPTB1216 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTB1216 IPR001269 tRNA-dihydrouridine synthase YPTB1216 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal YPTB1216 IPR032886 tRNA-dihydrouridine(16) synthase YPTB1216 IPR013785 Aldolase-type TIM barrel YPTB1216 IPR035587 DUS-like, FMN-binding domain YPTB1217 IPR012338 Beta-lactamase/transpeptidase-like YPTB1217 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTB1217 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTB1218 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB1218 IPR016164 FAD-linked oxidase-like, C-terminal YPTB1218 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPTB1218 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTB1218 IPR006094 FAD linked oxidase, N-terminal YPTB1218 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPTB1218 IPR016166 FAD-binding domain, PCMH-type YPTB1218 IPR012256 D-lactate dehydrogenase YPTB1218 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPTB1218 IPR036318 FAD-binding, type PCMH-like superfamily YPTB1219 IPR008173 Adenylyl cyclase CyaB YPTB1219 IPR023577 CYTH domain YPTB1219 IPR033469 CYTH-like domain superfamily YPTB1220 IPR003615 HNH nuclease YPTB1220 IPR002711 HNH endonuclease YPTB1222 IPR007341 Transglycosylase-associated protein YPTB1223 IPR003593 AAA+ ATPase domain YPTB1223 IPR003439 ABC transporter-like YPTB1223 IPR017871 ABC transporter, conserved site YPTB1223 IPR012693 ABC transporter, phosphonate import, PhnC YPTB1223 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1224 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein YPTB1225 IPR005769 ABC transporter, permease PhnE/PtxC YPTB1225 IPR035906 MetI-like superfamily YPTB1225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1226 IPR005769 ABC transporter, permease PhnE/PtxC YPTB1226 IPR035906 MetI-like superfamily YPTB1226 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1227 IPR009921 Domain of unknown function DUF1456 YPTB1228 IPR028082 Periplasmic binding protein-like I YPTB1228 IPR002197 DNA binding HTH domain, Fis-type YPTB1228 IPR025944 Sigma-54 interaction domain, conserved site YPTB1228 IPR009057 Homeobox-like domain superfamily YPTB1228 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1228 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB1228 IPR003593 AAA+ ATPase domain YPTB1228 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB1228 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB1228 IPR000014 PAS domain YPTB1229 IPR001851 ABC transporter, permease YPTB1230 IPR001851 ABC transporter, permease YPTB1231 IPR003593 AAA+ ATPase domain YPTB1231 IPR005876 Cobalt transport protein ATP-binding subunit YPTB1231 IPR017871 ABC transporter, conserved site YPTB1231 IPR003439 ABC transporter-like YPTB1231 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1232 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPTB1232 IPR003593 AAA+ ATPase domain YPTB1232 IPR017871 ABC transporter, conserved site YPTB1232 IPR003439 ABC transporter-like YPTB1232 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1235 IPR001763 Rhodanese-like domain YPTB1235 IPR001307 Thiosulphate sulfurtransferase, conserved site YPTB1235 IPR036873 Rhodanese-like domain superfamily YPTB1236 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTB1237 IPR035906 MetI-like superfamily YPTB1237 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1238 IPR003593 AAA+ ATPase domain YPTB1238 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1238 IPR017871 ABC transporter, conserved site YPTB1238 IPR003439 ABC transporter-like YPTB1239 IPR035906 MetI-like superfamily YPTB1239 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1240 IPR002293 Amino acid/polyamine transporter I YPTB1241 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPTB1241 IPR011193 Ornithine/lysine/arginine decarboxylase YPTB1241 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1241 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPTB1241 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPTB1241 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1241 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPTB1241 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1243 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPTB1243 IPR000620 EamA domain YPTB1244 IPR001897 Porin, gammaproteobacterial YPTB1244 IPR001702 Porin, Gram-negative type YPTB1244 IPR033900 Porin domain, Gram-negative type YPTB1244 IPR023614 Porin domain superfamily YPTB1244 IPR013793 Porin, Gram-negative type, conserved site YPTB1245 IPR039000 ATP-dependent DNA helicase DinG YPTB1245 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPTB1245 IPR010614 DEAD2 YPTB1245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1245 IPR001650 Helicase, C-terminal YPTB1245 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB1245 IPR006554 Helicase-like, DEXD box c2 type YPTB1245 IPR006555 ATP-dependent helicase, C-terminal YPTB1246 IPR040333 Catalase, clade 3 YPTB1246 IPR024708 Catalase active site YPTB1246 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPTB1246 IPR011614 Catalase core domain YPTB1246 IPR002226 Catalase haem-binding site YPTB1246 IPR037060 Catalase core domain superfamily YPTB1246 IPR018028 Catalase, mono-functional, haem-containing YPTB1246 IPR010582 Catalase immune-responsive domain YPTB1246 IPR020835 Catalase superfamily YPTB1247 IPR009998 YfaZ YPTB1247 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB1247 IPR023614 Porin domain superfamily YPTB1248 IPR018227 Amino acid/polyamine transporter 2 YPTB1248 IPR013061 Tryptophan/tryrosine permease, conserved site YPTB1248 IPR013059 Tryptophan/tyrosine transporter YPTB1250 IPR036425 MoaB/Mog-like domain superfamily YPTB1250 IPR008135 Competence-induced protein CinA YPTB1250 IPR001453 MoaB/Mog domain YPTB1250 IPR036653 CinA-like, C-terminal YPTB1251 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPTB1251 IPR005658 Proteinase inhibitor I11, ecotin YPTB1251 IPR036198 Ecotin superfamily YPTB1252 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB1252 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB1252 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTB1252 IPR012675 Beta-grasp domain superfamily YPTB1253 IPR000358 Ribonucleotide reductase small subunit family YPTB1253 IPR033909 Ribonucleotide reductase small subunit YPTB1253 IPR012348 Ribonucleotide reductase-like YPTB1253 IPR030475 Ribonucleotide reductase small subunit, acitve site YPTB1253 IPR009078 Ferritin-like superfamily YPTB1254 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPTB1254 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPTB1254 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPTB1254 IPR005144 ATP-cone domain YPTB1254 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPTB1254 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPTB1255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1255 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPTB1256 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTB1256 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPTB1256 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPTB1256 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPTB1256 IPR005743 DNA gyrase, subunit A YPTB1256 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPTB1256 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPTB1257 IPR030856 Sensor histidine kinase RcsC YPTB1257 IPR001789 Signal transduction response regulator, receiver domain YPTB1257 IPR005467 Histidine kinase domain YPTB1257 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1257 IPR011006 CheY-like superfamily YPTB1257 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB1257 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1257 IPR038388 RcsC, C-terminal domain superfamily YPTB1257 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB1257 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB1257 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPTB1258 IPR030864 Transcriptional regulatory protein RcsB YPTB1258 IPR001789 Signal transduction response regulator, receiver domain YPTB1258 IPR011006 CheY-like superfamily YPTB1258 IPR000792 Transcription regulator LuxR, C-terminal YPTB1258 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1258 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1259 IPR036641 HPT domain superfamily YPTB1259 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily YPTB1259 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YPTB1259 IPR005467 Histidine kinase domain YPTB1259 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1259 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1259 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB1259 IPR030861 Phosphotransferase RcsD YPTB1260 IPR036259 MFS transporter superfamily YPTB1260 IPR020846 Major facilitator superfamily domain YPTB1260 IPR011701 Major facilitator superfamily YPTB1261 IPR001702 Porin, Gram-negative type YPTB1261 IPR013793 Porin, Gram-negative type, conserved site YPTB1261 IPR023614 Porin domain superfamily YPTB1261 IPR001897 Porin, gammaproteobacterial YPTB1262 IPR001466 Beta-lactamase-related YPTB1262 IPR012338 Beta-lactamase/transpeptidase-like YPTB1263 IPR036259 MFS transporter superfamily YPTB1263 IPR001927 Sodium:galactoside symporter YPTB1263 IPR018043 Sodium:galactoside symporter, conserved site YPTB1263 IPR039672 Lactose permease-like YPTB1264 IPR001279 Metallo-beta-lactamase YPTB1264 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPTB1264 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB1265 IPR033479 Double Cache domain 1 YPTB1265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB1265 IPR003660 HAMP domain YPTB1265 IPR029151 Periplasmic sensor-like domain superfamily YPTB1265 IPR000727 Target SNARE coiled-coil homology domain YPTB1265 IPR004090 Chemotaxis methyl-accepting receptor YPTB1266 IPR000036 Peptidase A26, omptin YPTB1266 IPR020079 Peptidase A26, omptin, conserved site YPTB1266 IPR020080 Outer membrane adhesin/peptidase omptin YPTB1267 IPR036687 DinI-like superfamily YPTB1267 IPR010391 DNA damage-inducible protein DinI-like YPTB1268 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB1268 IPR036286 LexA/Signal peptidase-like superfamily YPTB1268 IPR039418 LexA-like YPTB1268 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB1268 IPR001387 Cro/C1-type helix-turn-helix domain YPTB1269 IPR010534 Bacteriophage 933W, GpQ YPTB1270 IPR010737 Four-carbon acid sugar kinase, N-terminal domain YPTB1270 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily YPTB1270 IPR031475 Nucleotide-binding C-terminal domain YPTB1270 IPR042213 Nucleotide-binding, C-terminal domain superfamily YPTB1272 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1272 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB1272 IPR036390 Winged helix DNA-binding domain superfamily YPTB1272 IPR014036 DeoR C-terminal sensor domain YPTB1272 IPR037171 NagB/RpiA transferase-like YPTB1272 IPR001034 DeoR-type HTH domain YPTB1273 IPR026040 Hydroxypyruvate isomerase-like YPTB1273 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB1273 IPR036237 Xylose isomerase-like superfamily YPTB1277 IPR020287 Tail sheath protein, C-terminal domain YPTB1277 IPR007067 Tail sheath protein YPTB1277 IPR035089 Tail sheath protein, subtilisin-like domain YPTB1285 IPR006949 Baseplate protein J-like YPTB1289 IPR009057 Homeobox-like domain superfamily YPTB1289 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1289 IPR035472 RpiR-like, SIS domain YPTB1289 IPR000281 Helix-turn-helix protein RpiR YPTB1289 IPR001347 Sugar isomerase (SIS) YPTB1290 IPR018120 Glycoside hydrolase family 1, active site YPTB1290 IPR017853 Glycoside hydrolase superfamily YPTB1290 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPTB1290 IPR001360 Glycoside hydrolase family 1 YPTB1296 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB1296 IPR000917 Sulfatase, N-terminal YPTB1296 IPR012159 Inner membrane protein YejM YPTB1296 IPR024588 Inner membrane protein YejM, N-terminal YPTB1297 IPR009857 Uncharacterised protein family UPF0352 YPTB1297 IPR023202 YejL-like superfamily YPTB1298 IPR007358 Nucleoid-associated protein NdpA YPTB1299 IPR029751 Ribosomal protein L25 YPTB1299 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPTB1299 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPTB1299 IPR020055 Ribosomal protein L25, short-form YPTB1300 IPR006935 Helicase/UvrB, N-terminal YPTB1300 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB1300 IPR001650 Helicase, C-terminal YPTB1300 IPR011332 Zinc-binding ribosomal protein YPTB1300 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1301 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTB1301 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTB1301 IPR002942 RNA-binding S4 domain YPTB1301 IPR036986 RNA-binding S4 domain superfamily YPTB1301 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB1301 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTB1301 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB1302 IPR020846 Major facilitator superfamily domain YPTB1302 IPR036259 MFS transporter superfamily YPTB1302 IPR004734 Multidrug resistance protein YPTB1302 IPR011701 Major facilitator superfamily YPTB1302 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPTB1303 IPR020489 Uncharacterised protein family YejG YPTB1304 IPR003439 ABC transporter-like YPTB1304 IPR017871 ABC transporter, conserved site YPTB1304 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB1304 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1304 IPR003593 AAA+ ATPase domain YPTB1305 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB1305 IPR035906 MetI-like superfamily YPTB1305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1306 IPR035906 MetI-like superfamily YPTB1306 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1307 IPR030678 Peptide/nickel binding protein, MppA-type YPTB1307 IPR000914 Solute-binding protein family 5 domain YPTB1307 IPR039424 Solute-binding protein family 5 YPTB1308 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPTB1308 IPR001633 EAL domain YPTB1308 IPR035919 EAL domain superfamily YPTB1309 IPR000064 Endopeptidase, NLPC/P60 domain YPTB1309 IPR038765 Papain-like cysteine peptidase superfamily YPTB1310 IPR032908 Lipid A 1-diphosphate synthase YPTB1310 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTB1310 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB1311 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPTB1311 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTB1311 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1313 IPR011711 GntR, C-terminal YPTB1313 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB1313 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1313 IPR000524 Transcription regulator HTH, GntR YPTB1313 IPR036390 Winged helix DNA-binding domain superfamily YPTB1314 IPR023027 Mannitol dehydrogenase, conserved site YPTB1314 IPR036291 NAD(P)-binding domain superfamily YPTB1314 IPR013131 Mannitol dehydrogenase, N-terminal YPTB1314 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB1314 IPR000669 Mannitol dehydrogenase YPTB1314 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB1314 IPR013118 Mannitol dehydrogenase, C-terminal YPTB1315 IPR036237 Xylose isomerase-like superfamily YPTB1315 IPR004628 Mannonate dehydratase YPTB1316 IPR015365 Elongation factor P, C-terminal YPTB1316 IPR012340 Nucleic acid-binding, OB-fold YPTB1316 IPR014722 Ribosomal protein L2, domain 2 YPTB1316 IPR020599 Translation elongation factor P/YeiP YPTB1316 IPR013185 Translation elongation factor, KOW-like YPTB1316 IPR011897 Translation elongation factor P-like, YeiP YPTB1316 IPR008991 Translation protein SH3-like domain superfamily YPTB1316 IPR001059 Translation elongation factor P/YeiP, central YPTB1316 IPR013852 Translation elongation factor P/YeiP, conserved site YPTB1317 IPR013059 Tryptophan/tyrosine transporter YPTB1317 IPR018227 Amino acid/polyamine transporter 2 YPTB1318 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTB1319 IPR036291 NAD(P)-binding domain superfamily YPTB1319 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1319 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1320 IPR006236 D-3-phosphoglycerate dehydrogenase YPTB1320 IPR029009 Allosteric substrate binding domain superfamily YPTB1320 IPR036291 NAD(P)-binding domain superfamily YPTB1320 IPR002912 ACT domain YPTB1320 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB1320 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB1320 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB1320 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB1322 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB1322 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1322 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1322 IPR015590 Aldehyde dehydrogenase domain YPTB1322 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1322 IPR010102 Succinate semialdehyde dehydrogenase YPTB1322 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1323 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB1323 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB1323 IPR000577 Carbohydrate kinase, FGGY YPTB1323 IPR006000 Xylulokinase YPTB1323 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTB1324 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPTB1324 IPR004788 Ribose 5-phosphate isomerase, type A YPTB1324 IPR037171 NagB/RpiA transferase-like YPTB1326 IPR003593 AAA+ ATPase domain YPTB1326 IPR003439 ABC transporter-like YPTB1326 IPR017871 ABC transporter, conserved site YPTB1326 IPR015861 ABC transporter, ribose import, RbsA YPTB1326 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1327 IPR001851 ABC transporter, permease YPTB1328 IPR015797 NUDIX hydrolase-like domain superfamily YPTB1328 IPR000086 NUDIX hydrolase domain YPTB1328 IPR020084 NUDIX hydrolase, conserved site YPTB1328 IPR020476 NUDIX hydrolase YPTB1329 IPR002178 PTS EIIA type-2 domain YPTB1329 IPR016152 Phosphotransferase/anion transporter YPTB1329 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTB1329 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB1329 IPR035895 HPr-like superfamily YPTB1329 IPR000032 Phosphocarrier protein HPr-like YPTB1330 IPR011611 Carbohydrate kinase PfkB YPTB1330 IPR022463 Fructose 1-phosphate kinase YPTB1330 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB1330 IPR029056 Ribokinase-like YPTB1330 IPR017583 Tagatose/fructose phosphokinase YPTB1331 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTB1331 IPR003352 Phosphotransferase system, EIIC YPTB1331 IPR013014 Phosphotransferase system, EIIC component, type 2 YPTB1331 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTB1331 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPTB1331 IPR006327 Phosphotransferase system, fructose IIC component YPTB1331 IPR036095 PTS system IIB component-like superfamily YPTB1332 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1332 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1332 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB1333 IPR035182 Protein of unknown function PsaF YPTB1335 IPR001829 Pili assembly chaperone, bacterial YPTB1335 IPR008962 PapD-like superfamily YPTB1335 IPR016148 Pili assembly chaperone, C-terminal YPTB1335 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB1335 IPR018046 Pili assembly chaperone, conserved site YPTB1335 IPR016147 Pili assembly chaperone, N-terminal YPTB1335 IPR013783 Immunoglobulin-like fold YPTB1336 IPR025949 PapC-like, C-terminal domain YPTB1336 IPR000015 Outer membrane usher protein YPTB1336 IPR018030 Fimbrial membrane usher, conserved site YPTB1336 IPR042186 Outer membrane usher protein FimD, plug domain YPTB1336 IPR037224 PapC, N-terminal domain superfamily YPTB1336 IPR025885 PapC, N-terminal domain YPTB1337 IPR013022 Xylose isomerase-like, TIM barrel domain YPTB1337 IPR036237 Xylose isomerase-like superfamily YPTB1337 IPR018246 AP endonuclease 2, zinc binding site YPTB1337 IPR001719 AP endonuclease 2 YPTB1338 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPTB1338 IPR004630 Uncharacterised protein family UPF0324, bacteria YPTB1339 IPR036390 Winged helix DNA-binding domain superfamily YPTB1339 IPR000847 Transcription regulator HTH, LysR YPTB1339 IPR005119 LysR, substrate-binding YPTB1339 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1340 IPR004841 Amino acid permease/ SLC12A domain YPTB1340 IPR004840 Amino acid permease, conserved site YPTB1342 IPR037294 ABC transporter, BtuC-like YPTB1342 IPR000522 ABC transporter, permease protein, BtuC-like YPTB1343 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1343 IPR015863 ABC transporter, hemin import, HmuV YPTB1343 IPR003439 ABC transporter-like YPTB1343 IPR003593 AAA+ ATPase domain YPTB1344 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB1344 IPR010917 TonB-dependent receptor, conserved site YPTB1344 IPR012910 TonB-dependent receptor, plug domain YPTB1344 IPR039426 Vitamin B12 transporter BtuB-like YPTB1344 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB1344 IPR010916 TonB box, conserved site YPTB1344 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB1345 IPR036249 Thioredoxin-like superfamily YPTB1345 IPR004046 Glutathione S-transferase, C-terminal YPTB1345 IPR004045 Glutathione S-transferase, N-terminal YPTB1345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTB1345 IPR010987 Glutathione S-transferase, C-terminal-like YPTB1346 IPR036412 HAD-like superfamily YPTB1346 IPR023214 HAD superfamily YPTB1346 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like YPTB1348 IPR004872 Lipoprotein NlpA family YPTB1349 IPR017871 ABC transporter, conserved site YPTB1349 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPTB1349 IPR003439 ABC transporter-like YPTB1349 IPR003593 AAA+ ATPase domain YPTB1349 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPTB1349 IPR018449 NIL domain YPTB1349 IPR026253 Methionine import ATP-binding protein MetN YPTB1349 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1350 IPR035906 MetI-like superfamily YPTB1350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1351 IPR012338 Beta-lactamase/transpeptidase-like YPTB1351 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPTB1351 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTB1351 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPTB1351 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPTB1351 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTB1352 IPR004694 Hydroxy amino acid transporter YPTB1353 IPR001034 DeoR-type HTH domain YPTB1353 IPR014036 DeoR C-terminal sensor domain YPTB1353 IPR037171 NagB/RpiA transferase-like YPTB1353 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB1354 IPR028581 Deoxyribose-phosphate aldolase type I YPTB1354 IPR002915 DeoC/FbaB/ lacD aldolase YPTB1354 IPR011343 Deoxyribose-phosphate aldolase YPTB1354 IPR013785 Aldolase-type TIM barrel YPTB1355 IPR033879 Undecaprenyl-diphosphatase YPTB1355 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB1355 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTB1357 IPR006037 Regulator of K+ conductance, C-terminal YPTB1357 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTB1357 IPR006512 YidE/YbjL duplication YPTB1357 IPR023017 Transport protein YbjL, putative YPTB1358 IPR014025 Glutaredoxin subgroup YPTB1358 IPR002109 Glutaredoxin YPTB1358 IPR036249 Thioredoxin-like superfamily YPTB1358 IPR011767 Glutaredoxin active site YPTB1358 IPR011902 Glutaredoxin, GrxA YPTB1359 IPR010815 Protein of unknown function DUF1418 YPTB1360 IPR019660 Putative sensory transduction regulator YbjN YPTB1361 IPR006059 Bacterial extracellular solute-binding protein YPTB1361 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPTB1362 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTB1362 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1362 IPR008995 Molybdate/tungstate binding, C-terminal YPTB1362 IPR017871 ABC transporter, conserved site YPTB1362 IPR003439 ABC transporter-like YPTB1362 IPR013611 Transport-associated OB, type 2 YPTB1362 IPR003593 AAA+ ATPase domain YPTB1363 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1363 IPR035906 MetI-like superfamily YPTB1365 IPR019703 Protein of unknown function DUF2593 YPTB1366 IPR030391 RNA methyltransferase TrmA, conserved site YPTB1366 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1366 IPR010280 (Uracil-5)-methyltransferase family YPTB1366 IPR030390 RNA methyltransferase TrmA, active site YPTB1366 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPTB1367 IPR018313 Solute-binding protein family 3, conserved site YPTB1367 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB1367 IPR001320 Ionotropic glutamate receptor YPTB1367 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTB1370 IPR000522 ABC transporter, permease protein, BtuC-like YPTB1370 IPR037294 ABC transporter, BtuC-like YPTB1371 IPR003593 AAA+ ATPase domain YPTB1371 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1371 IPR017871 ABC transporter, conserved site YPTB1371 IPR003439 ABC transporter-like YPTB1372 IPR004298 Nicotianamine synthase YPTB1372 IPR036291 NAD(P)-binding domain superfamily YPTB1373 IPR036291 NAD(P)-binding domain superfamily YPTB1373 IPR016935 Opine metallophore dehydrogenase YPTB1374 IPR000620 EamA domain YPTB1375 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB1375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1375 IPR035906 MetI-like superfamily YPTB1376 IPR035906 MetI-like superfamily YPTB1376 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB1376 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1377 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTB1377 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB1377 IPR001320 Ionotropic glutamate receptor YPTB1377 IPR018313 Solute-binding protein family 3, conserved site YPTB1378 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1378 IPR017871 ABC transporter, conserved site YPTB1378 IPR003439 ABC transporter-like YPTB1378 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTB1378 IPR003593 AAA+ ATPase domain YPTB1379 IPR036263 Chorismate mutase type II superfamily YPTB1379 IPR002701 Chorismate mutase II, prokaryotic-type YPTB1379 IPR008240 Chorismate mutase, periplasmic YPTB1380 IPR024289 Domain of unknown function DUF3828 YPTB1381 IPR036291 NAD(P)-binding domain superfamily YPTB1381 IPR001509 NAD-dependent epimerase/dehydratase YPTB1382 IPR036291 NAD(P)-binding domain superfamily YPTB1382 IPR016040 NAD(P)-binding domain YPTB1382 IPR021295 Protein of unknown function DUF2867 YPTB1383 IPR023603 Threonine aldolase YPTB1383 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1383 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1383 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1383 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPTB1384 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTB1384 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB1384 IPR000399 TPP-binding enzyme, conserved site YPTB1384 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB1384 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB1384 IPR029061 Thiamin diphosphate-binding fold YPTB1385 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB1385 IPR012675 Beta-grasp domain superfamily YPTB1385 IPR017938 Riboflavin synthase-like beta-barrel YPTB1385 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB1385 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB1385 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB1385 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB1385 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB1385 IPR000951 Phthalate dioxygenase reductase YPTB1386 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPTB1386 IPR016099 Prismane-like, alpha/beta-sandwich YPTB1386 IPR011254 Prismane-like superfamily YPTB1386 IPR016100 Prismane, alpha-bundle YPTB1386 IPR010048 Hydroxylamine reductase YPTB1387 IPR005642 Lysine exporter LysO YPTB1388 IPR022602 Protein of unknown function DUF2813 YPTB1388 IPR006171 TOPRIM domain YPTB1388 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1388 IPR034139 OLD protein-like, TOPRIM domain YPTB1389 IPR007488 Protein of unknown function DUF535 YPTB1390 IPR006143 RND efflux pump, membrane fusion protein YPTB1390 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB1390 IPR030190 Macrolide export protein MacA YPTB1391 IPR003439 ABC transporter-like YPTB1391 IPR003838 ABC transporter permease protein domain YPTB1391 IPR025857 MacB-like periplasmic core domain YPTB1391 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1391 IPR017871 ABC transporter, conserved site YPTB1391 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTB1391 IPR003593 AAA+ ATPase domain YPTB1392 IPR012751 CspD, cold shock YPTB1392 IPR012156 Cold shock, CspA YPTB1392 IPR011129 Cold shock domain YPTB1392 IPR019844 Cold-shock (CSD) domain YPTB1392 IPR002059 Cold-shock protein, DNA-binding YPTB1392 IPR012340 Nucleic acid-binding, OB-fold YPTB1393 IPR003769 Adaptor protein ClpS, core YPTB1393 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTB1393 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPTB1394 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPTB1394 IPR019489 Clp ATPase, C-terminal YPTB1394 IPR018368 ClpA/B, conserved site 1 YPTB1394 IPR003959 ATPase, AAA-type, core YPTB1394 IPR003593 AAA+ ATPase domain YPTB1394 IPR028299 ClpA/B, conserved site 2 YPTB1394 IPR001270 ClpA/B family YPTB1394 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1394 IPR036628 Clp, N-terminal domain superfamily YPTB1394 IPR004176 Clp, N-terminal YPTB1394 IPR041546 ClpA/ClpB, AAA lid domain YPTB1395 IPR022967 RNA-binding domain, S1 YPTB1395 IPR012340 Nucleic acid-binding, OB-fold YPTB1395 IPR004368 Translation initiation factor IF-1 YPTB1395 IPR006196 RNA-binding domain, S1, IF1 type YPTB1396 IPR016181 Acyl-CoA N-acyltransferase YPTB1396 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPTB1396 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal YPTB1397 IPR011527 ABC transporter type 1, transmembrane domain YPTB1397 IPR017871 ABC transporter, conserved site YPTB1397 IPR003439 ABC transporter-like YPTB1397 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPTB1397 IPR003593 AAA+ ATPase domain YPTB1397 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1397 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1398 IPR003593 AAA+ ATPase domain YPTB1398 IPR011527 ABC transporter type 1, transmembrane domain YPTB1398 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1398 IPR003439 ABC transporter-like YPTB1398 IPR017871 ABC transporter, conserved site YPTB1398 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPTB1398 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1398 IPR039421 Type I protein exporter YPTB1399 IPR023753 FAD/NAD(P)-binding domain YPTB1399 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPTB1399 IPR005982 Thioredoxin reductase YPTB1399 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB1400 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB1400 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1400 IPR000485 AsnC-type HTH domain YPTB1400 IPR011008 Dimeric alpha-beta barrel YPTB1400 IPR019888 Transcription regulator AsnC-type YPTB1400 IPR011991 ArsR-like helix-turn-helix domain YPTB1400 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB1400 IPR036390 Winged helix DNA-binding domain superfamily YPTB1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1401 IPR025199 DNA translocase FtsK, 4TM region YPTB1401 IPR041027 FtsK alpha domain YPTB1401 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1401 IPR002543 FtsK domain YPTB1401 IPR018541 FtsK gamma domain YPTB1401 IPR036390 Winged helix DNA-binding domain superfamily YPTB1402 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTB1402 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPTB1402 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPTB1403 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTB1403 IPR003959 ATPase, AAA-type, core YPTB1403 IPR003593 AAA+ ATPase domain YPTB1403 IPR032423 AAA C-terminal domain YPTB1403 IPR021886 MgsA AAA+ ATPase C-terminal YPTB1403 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1404 IPR002317 Serine-tRNA ligase, type1 YPTB1404 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB1404 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTB1404 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTB1404 IPR033729 Serine-tRNA ligase catalytic core domain YPTB1404 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPTB1404 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily YPTB1405 IPR011701 Major facilitator superfamily YPTB1405 IPR023745 MSF-type transporter, YcaD YPTB1405 IPR036259 MFS transporter superfamily YPTB1405 IPR020846 Major facilitator superfamily domain YPTB1406 IPR012839 Organic radical enzyme activase YPTB1406 IPR012838 Pyruvate formate-lyase 1 activating enzyme YPTB1406 IPR013785 Aldolase-type TIM barrel YPTB1406 IPR001989 Radical-activating enzyme, conserved site YPTB1406 IPR034465 Pyruvate formate-lyase activase YPTB1406 IPR034457 Organic radical-activating enzymes YPTB1406 IPR007197 Radical SAM YPTB1408 IPR001150 Glycine radical domain YPTB1408 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB1408 IPR005949 Formate acetyltransferase YPTB1408 IPR004184 Pyruvate formate lyase domain YPTB1409 IPR023999 Formate transporter FocA, putative YPTB1409 IPR000292 Formate/nitrite transporter YPTB1409 IPR023271 Aquaporin-like YPTB1409 IPR024002 Formate/nitrite transporter, conserved site YPTB1410 IPR041080 YcaO cyclodehydratase, C-terminal YPTB1410 IPR003776 YcaO-like domain YPTB1411 IPR027475 Asparaginase/glutaminase, active site 2 YPTB1411 IPR006034 Asparaginase/glutaminase-like YPTB1411 IPR027474 L-asparaginase, N-terminal YPTB1411 IPR037152 L-asparaginase, N-terminal domain superfamily YPTB1411 IPR036152 Asparaginase/glutaminase-like superfamily YPTB1411 IPR020827 Asparaginase/glutaminase, active site 1 YPTB1411 IPR004550 L-asparaginase, type II YPTB1411 IPR040919 Asparaginase/glutaminase, C-terminal YPTB1411 IPR027473 L-asparaginase, C-terminal YPTB1414 IPR022278 Phosphoserine aminotransferase YPTB1414 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB1414 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1414 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1414 IPR000192 Aminotransferase class V domain YPTB1414 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1415 IPR036968 Enolpyruvate transferase domain superfamily YPTB1415 IPR001986 Enolpyruvate transferase domain YPTB1415 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPTB1415 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPTB1415 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPTB1416 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1416 IPR011994 Cytidylate kinase domain YPTB1416 IPR003136 Cytidylate kinase YPTB1417 IPR003029 S1 domain YPTB1417 IPR012340 Nucleic acid-binding, OB-fold YPTB1417 IPR022967 RNA-binding domain, S1 YPTB1417 IPR000110 Ribosomal protein S1 YPTB1418 IPR000119 Histone-like DNA-binding protein YPTB1418 IPR020816 Histone-like DNA-binding protein, conserved site YPTB1418 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTB1418 IPR005685 Integration host factor, beta subunit YPTB1419 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB1419 IPR001279 Metallo-beta-lactamase YPTB1419 IPR004797 Competence protein ComEC/Rec2 YPTB1419 IPR004477 ComEC/Rec2-related protein YPTB1419 IPR035681 ComA-like, MBL domain YPTB1420 IPR011527 ABC transporter type 1, transmembrane domain YPTB1420 IPR003593 AAA+ ATPase domain YPTB1420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1420 IPR003439 ABC transporter-like YPTB1420 IPR017871 ABC transporter, conserved site YPTB1420 IPR039421 Type I protein exporter YPTB1420 IPR011917 ABC transporter, lipid A export, MsbA YPTB1420 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1421 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1421 IPR003758 Tetraacyldisaccharide 4'-kinase YPTB1422 IPR009770 Domain of unknown function DUF1338 YPTB1423 IPR012340 Nucleic acid-binding, OB-fold YPTB1423 IPR011129 Cold shock domain YPTB1423 IPR012156 Cold shock, CspA YPTB1423 IPR019844 Cold-shock (CSD) domain YPTB1423 IPR002059 Cold-shock protein, DNA-binding YPTB1424 IPR005651 Trm112-like YPTB1425 IPR003329 Acylneuraminate cytidylyltransferase YPTB1425 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPTB1425 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1426 IPR011009 Protein kinase-like domain superfamily YPTB1426 IPR002575 Aminoglycoside phosphotransferase YPTB1427 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1427 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase YPTB1428 IPR038198 MukF, C-terminal domain superfamily YPTB1428 IPR036141 MukF, middle domain superfamily YPTB1428 IPR033440 Chromosome partition protein MukF, middle domain YPTB1428 IPR036390 Winged helix DNA-binding domain superfamily YPTB1428 IPR033441 Chromosome partition protein MukF, C-terminal domain YPTB1428 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1428 IPR010916 TonB box, conserved site YPTB1428 IPR033439 Chromosome partition protein MukF, winged-helix domain YPTB1428 IPR005582 Chromosome partition protein MukF YPTB1429 IPR042037 MukE, C-terminal domain YPTB1429 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPTB1429 IPR042038 MukE, N-terminal domain YPTB1430 IPR012090 Chromosome partition protein MukB YPTB1430 IPR032520 MukB, hinge domain YPTB1430 IPR007406 MukB, N-terminal domain YPTB1430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1431 IPR002477 Peptidoglycan binding-like YPTB1431 IPR005490 L,D-transpeptidase catalytic domain YPTB1431 IPR036365 PGBD-like superfamily YPTB1431 IPR038063 L,D-transpeptidase catalytic domain-like YPTB1432 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB1432 IPR010275 Protein of unknown function DUF882 YPTB1432 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTB1433 IPR001279 Metallo-beta-lactamase YPTB1433 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB1434 IPR004839 Aminotransferase, class I/classII YPTB1434 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1434 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1434 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPTB1434 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1434 IPR000796 Aspartate/other aminotransferase YPTB1435 IPR013793 Porin, Gram-negative type, conserved site YPTB1435 IPR001702 Porin, Gram-negative type YPTB1435 IPR001897 Porin, gammaproteobacterial YPTB1435 IPR023614 Porin domain superfamily YPTB1435 IPR033900 Porin domain, Gram-negative type YPTB1436 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPTB1436 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTB1436 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTB1436 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB1436 IPR004522 Asparagine-tRNA ligase YPTB1436 IPR012340 Nucleic acid-binding, OB-fold YPTB1437 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPTB1437 IPR007229 Nicotinate phosphoribosyltransferase family YPTB1437 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain YPTB1437 IPR006406 Nicotinate phosphoribosyltransferase YPTB1437 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase YPTB1438 IPR012779 Peptidase M1, alanyl aminopeptidase YPTB1438 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YPTB1438 IPR027268 Peptidase M4/M1, CTD superfamily YPTB1438 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPTB1438 IPR042097 Aminopeptidase N-like , N-terminal YPTB1438 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YPTB1438 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPTB1438 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YPTB1438 IPR014782 Peptidase M1, membrane alanine aminopeptidase YPTB1439 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPTB1439 IPR005719 Dihydroorotate dehydrogenase, class 2 YPTB1439 IPR013785 Aldolase-type TIM barrel YPTB1439 IPR001295 Dihydroorotate dehydrogenase, conserved site YPTB1439 IPR005720 Dihydroorotate dehydrogenase domain YPTB1440 IPR009809 Cell division protein ZapC YPTB1441 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB1441 IPR005303 MOSC, N-terminal beta barrel YPTB1441 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTB1441 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPTB1441 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTB1441 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB1441 IPR012675 Beta-grasp domain superfamily YPTB1442 IPR000241 Putative RNA methylase domain YPTB1442 IPR019614 S-adenosylmethionine-dependent methyltransferase YPTB1442 IPR004114 THUMP domain YPTB1442 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPTB1442 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1442 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB1443 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPTB1443 IPR032524 ABC transporter Uup, C-terminal YPTB1443 IPR017871 ABC transporter, conserved site YPTB1443 IPR003439 ABC transporter-like YPTB1443 IPR032781 ABC-transporter extension domain YPTB1443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1443 IPR003593 AAA+ ATPase domain YPTB1444 IPR007498 Intermembrane transport protein PqiA-like YPTB1444 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPTB1445 IPR003399 Mce/MlaD YPTB1446 IPR005586 ABC-type transport auxiliary lipoprotein component YPTB1448 IPR007040 Ribosome modulation factor YPTB1448 IPR023200 Ribosome modulation factor domain superfamily YPTB1449 IPR016039 Thiolase-like YPTB1449 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB1449 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB1449 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB1449 IPR018201 Beta-ketoacyl synthase, active site YPTB1449 IPR000794 Beta-ketoacyl synthase YPTB1449 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPTB1450 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPTB1450 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTB1450 IPR029069 HotDog domain superfamily YPTB1451 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB1451 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB1451 IPR008269 Peptidase S16, Lon proteolytic domain YPTB1451 IPR027065 Lon protease YPTB1451 IPR041699 Lon protease, AAA domain YPTB1452 IPR035087 MatP, N-terminal YPTB1452 IPR009390 Macrodomain Ter protein, MatP YPTB1452 IPR038339 MatP, N-terminal domain superfamily YPTB1452 IPR035375 MatP, C-terminal ribbon-helix-helix domain YPTB1452 IPR013321 Arc-type ribbon-helix-helix YPTB1453 IPR036737 OmpA-like domain superfamily YPTB1453 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB1453 IPR000498 Outer membrane protein OmpA-like, transmembrane domain YPTB1453 IPR002368 Outer membrane protein, OmpA YPTB1453 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB1453 IPR006664 Outer membrane protein, bacterial YPTB1453 IPR006665 OmpA-like domain YPTB1454 IPR004596 Cell division suppressor protein, SulA YPTB1454 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1455 IPR007077 TfoX, C-terminal YPTB1455 IPR007076 TfoX, N-terminal YPTB1455 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPTB1456 IPR032692 Integral membrane protein YccS, N-terminal YPTB1456 IPR010020 Integral membrane protein, YccS/YhfK YPTB1456 IPR010019 Integral membrane protein, YccS YPTB1457 IPR031308 Uncharacterised conserved protein UCP028777 YPTB1457 IPR005185 Inner membrane component domain YPTB1458 IPR034739 UvrD/AddA helicase, N-terminal YPTB1458 IPR014017 UvrD-like DNA helicase, C-terminal YPTB1458 IPR022161 DNA helicase IV, N-terminal domain YPTB1458 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1458 IPR014016 UvrD-like helicase, ATP-binding domain YPTB1458 IPR000212 DNA helicase, UvrD/REP type YPTB1459 IPR036914 Methylglyoxal synthase-like domain superfamily YPTB1459 IPR018148 Methylglyoxal synthase, active site YPTB1459 IPR004363 Methylglyoxal synthase YPTB1459 IPR011607 Methylglyoxal synthase-like domain YPTB1460 IPR018635 Uncharacterised protein family UPF0319 YPTB1461 IPR036291 NAD(P)-binding domain superfamily YPTB1461 IPR003781 CoA-binding YPTB1462 IPR022866 Heat shock protein HspQ YPTB1462 IPR011722 Hemimethylated DNA-binding domain YPTB1462 IPR036623 Hemimethylated DNA-binding domain superfamily YPTB1463 IPR036974 PUA domain superfamily YPTB1463 IPR002478 PUA domain YPTB1463 IPR015947 PUA-like superfamily YPTB1463 IPR041532 RlmI, PUA-like domain YPTB1463 IPR023542 rRNA large subunit methyltransferase I YPTB1463 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1463 IPR019614 S-adenosylmethionine-dependent methyltransferase YPTB1464 IPR036046 Acylphosphatase-like domain superfamily YPTB1464 IPR028627 Acylphosphatase, bacteria YPTB1464 IPR017968 Acylphosphatase, conserved site YPTB1464 IPR001792 Acylphosphatase-like domain YPTB1464 IPR020456 Acylphosphatase YPTB1465 IPR007453 Sulphur transfer protein DsrC/TusE YPTB1465 IPR025526 DsrC-like domain superfamily YPTB1465 IPR042072 DsrC-like protein, C-terminal domain YPTB1469 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB1469 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPTB1469 IPR006094 FAD linked oxidase, N-terminal YPTB1469 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTB1469 IPR036318 FAD-binding, type PCMH-like superfamily YPTB1469 IPR016164 FAD-linked oxidase-like, C-terminal YPTB1469 IPR016166 FAD-binding domain, PCMH-type YPTB1469 IPR012951 Berberine/berberine-like YPTB1470 IPR011294 3-hydroxybutyrate dehydrogenase YPTB1470 IPR036291 NAD(P)-binding domain superfamily YPTB1470 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1470 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1472 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPTB1472 IPR029069 HotDog domain superfamily YPTB1472 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTB1473 IPR000794 Beta-ketoacyl synthase YPTB1473 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB1473 IPR016039 Thiolase-like YPTB1473 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB1473 IPR018201 Beta-ketoacyl synthase, active site YPTB1473 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB1474 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1474 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTB1474 IPR036291 NAD(P)-binding domain superfamily YPTB1474 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1475 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPTB1475 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPTB1475 IPR016039 Thiolase-like YPTB1477 IPR029045 ClpP/crotonase-like domain superfamily YPTB1477 IPR001753 Enoyl-CoA hydratase/isomerase YPTB1477 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTB1478 IPR036291 NAD(P)-binding domain superfamily YPTB1478 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1478 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1480 IPR036736 ACP-like superfamily YPTB1480 IPR009081 Phosphopantetheine binding ACP domain YPTB1481 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTB1481 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPTB1481 IPR001227 Acyl transferase domain superfamily YPTB1481 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTB1481 IPR014043 Acyl transferase YPTB1481 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPTB1487 IPR028974 TSP type-3 repeat YPTB1487 IPR008722 Outer membrane porin F, N-terminal YPTB1487 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB1487 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB1487 IPR036737 OmpA-like domain superfamily YPTB1487 IPR006664 Outer membrane protein, bacterial YPTB1487 IPR006665 OmpA-like domain YPTB1489 IPR003593 AAA+ ATPase domain YPTB1489 IPR004176 Clp, N-terminal YPTB1489 IPR019489 Clp ATPase, C-terminal YPTB1489 IPR001270 ClpA/B family YPTB1489 IPR041546 ClpA/ClpB, AAA lid domain YPTB1489 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB1489 IPR018368 ClpA/B, conserved site 1 YPTB1489 IPR003959 ATPase, AAA-type, core YPTB1489 IPR036628 Clp, N-terminal domain superfamily YPTB1489 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1508 IPR003439 ABC transporter-like YPTB1508 IPR032781 ABC-transporter extension domain YPTB1508 IPR003593 AAA+ ATPase domain YPTB1508 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1510 IPR000594 THIF-type NAD/FAD binding fold YPTB1510 IPR035985 Ubiquitin-activating enzyme YPTB1510 IPR012730 Molybdopterin synthase sulfurylase MoeB YPTB1511 IPR036425 MoaB/Mog-like domain superfamily YPTB1511 IPR005110 MoeA, N-terminal and linker domain YPTB1511 IPR036688 MoeA, C-terminal, domain IV superfamily YPTB1511 IPR005111 MoeA, C-terminal, domain IV YPTB1511 IPR038987 Molybdopterin biosynthesis protein MoeA-like YPTB1511 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPTB1511 IPR036135 MoeA, N-terminal and linker domain superfamily YPTB1511 IPR001453 MoaB/Mog domain YPTB1513 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1513 IPR003593 AAA+ ATPase domain YPTB1513 IPR017871 ABC transporter, conserved site YPTB1513 IPR003439 ABC transporter-like YPTB1514 IPR006143 RND efflux pump, membrane fusion protein YPTB1514 IPR022824 Multidrug resistance protein MdtA YPTB1514 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTB1516 IPR014186 S-formylglutathione hydrolase YPTB1516 IPR029058 Alpha/Beta hydrolase fold YPTB1516 IPR000801 Putative esterase YPTB1517 IPR013149 Alcohol dehydrogenase, C-terminal YPTB1517 IPR011032 GroES-like superfamily YPTB1517 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPTB1517 IPR013154 Alcohol dehydrogenase, N-terminal YPTB1517 IPR020843 Polyketide synthase, enoylreductase domain YPTB1517 IPR036291 NAD(P)-binding domain superfamily YPTB1517 IPR014183 Alcohol dehydrogenase class III YPTB1518 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1518 IPR000847 Transcription regulator HTH, LysR YPTB1518 IPR005119 LysR, substrate-binding YPTB1518 IPR036390 Winged helix DNA-binding domain superfamily YPTB1519 IPR010645 Uncharacterised MFS-type transporter YbfB YPTB1519 IPR036259 MFS transporter superfamily YPTB1520 IPR018234 GTP cyclohydrolase I, conserved site YPTB1520 IPR020602 GTP cyclohydrolase I domain YPTB1520 IPR001474 GTP cyclohydrolase I YPTB1521 IPR007349 Domain of unknown function DUF418 YPTB1522 IPR025997 Periplasmic binding protein YPTB1522 IPR028082 Periplasmic binding protein-like I YPTB1523 IPR017871 ABC transporter, conserved site YPTB1523 IPR003593 AAA+ ATPase domain YPTB1523 IPR003439 ABC transporter-like YPTB1523 IPR015862 ABC transporter, galactose import, MglA YPTB1523 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1524 IPR030158 Galactoside transport system permease protein MglC YPTB1524 IPR001851 ABC transporter, permease YPTB1525 IPR023604 Uncharacterised protein family SanA YPTB1525 IPR003848 Domain of unknown function DUF218 YPTB1526 IPR023667 NAD-dependent malic enzyme, proteobacteria YPTB1526 IPR036291 NAD(P)-binding domain superfamily YPTB1526 IPR037062 Malic enzyme, N-terminal domain superfamily YPTB1526 IPR012301 Malic enzyme, N-terminal domain YPTB1526 IPR015884 Malic enzyme, conserved site YPTB1526 IPR012302 Malic enzyme, NAD-binding YPTB1526 IPR001891 Malic oxidoreductase YPTB1527 IPR006263 Cytidine deaminase, homodimeric YPTB1527 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPTB1527 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTB1527 IPR016193 Cytidine deaminase-like YPTB1527 IPR020797 Cytidine deaminase, bacteria YPTB1527 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTB1528 IPR007300 CidB/LrgB family YPTB1528 IPR005261 Conserved hypothetical protein CHP00659 YPTB1529 IPR005538 LrgA/CidA family YPTB1529 IPR022957 Uncharacterised protein family UPF0299 YPTB1530 IPR036259 MFS transporter superfamily YPTB1530 IPR011701 Major facilitator superfamily YPTB1530 IPR020846 Major facilitator superfamily domain YPTB1534 IPR002547 tRNA-binding domain YPTB1534 IPR012340 Nucleic acid-binding, OB-fold YPTB1534 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1534 IPR033911 Methioninyl-tRNA synthetase core domain YPTB1534 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPTB1534 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB1534 IPR015413 Methionyl/Leucyl tRNA synthetase YPTB1534 IPR014758 Methionyl-tRNA synthetase YPTB1534 IPR023458 Methionine-tRNA ligase, type 1 YPTB1534 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal YPTB1534 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain YPTB1534 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB1535 IPR034904 Fe-S cluster assembly domain superfamily YPTB1535 IPR000808 Mrp, conserved site YPTB1535 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1535 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YPTB1535 IPR019591 Mrp/NBP35 ATP-binding protein YPTB1536 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1536 IPR000764 Uridine kinase-like YPTB1536 IPR026008 Uridine kinase YPTB1536 IPR006083 Phosphoribulokinase/uridine kinase YPTB1537 IPR033704 dUTPase, trimeric YPTB1537 IPR036157 dUTPase-like superfamily YPTB1537 IPR029054 dUTPase-like YPTB1537 IPR011962 dCTP deaminase YPTB1538 IPR007844 AsmA YPTB1539 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB1539 IPR005496 Integral membrane protein TerC YPTB1539 IPR005170 Transporter-associated domain YPTB1539 IPR036318 FAD-binding, type PCMH-like superfamily YPTB1539 IPR000644 CBS domain YPTB1540 IPR022770 Ferric iron reductase FhuF domain YPTB1540 IPR024726 Ferric iron reductase, C-terminal YPTB1540 IPR008090 Ferric iron reductase YPTB1541 IPR021115 Pyridoxal-phosphate binding site YPTB1541 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPTB1541 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1541 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1542 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB1542 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTB1544 IPR022770 Ferric iron reductase FhuF domain YPTB1544 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTB1544 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTB1545 IPR003439 ABC transporter-like YPTB1545 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1545 IPR017871 ABC transporter, conserved site YPTB1545 IPR003593 AAA+ ATPase domain YPTB1546 IPR037294 ABC transporter, BtuC-like YPTB1546 IPR000522 ABC transporter, permease protein, BtuC-like YPTB1547 IPR037294 ABC transporter, BtuC-like YPTB1547 IPR000522 ABC transporter, permease protein, BtuC-like YPTB1548 IPR002491 ABC transporter periplasmic binding domain YPTB1549 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB1549 IPR011662 Secretin/TonB, short N-terminal domain YPTB1549 IPR039423 TonB-dependent receptor-like YPTB1549 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB1549 IPR010917 TonB-dependent receptor, conserved site YPTB1549 IPR010105 TonB-dependent siderophore receptor YPTB1549 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB1549 IPR012910 TonB-dependent receptor, plug domain YPTB1550 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTB1550 IPR022770 Ferric iron reductase FhuF domain YPTB1550 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTB1551 IPR005835 Nucleotidyl transferase domain YPTB1551 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1551 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPTB1552 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1552 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPTB1552 IPR005835 Nucleotidyl transferase domain YPTB1553 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB1553 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB1553 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPTB1553 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPTB1553 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPTB1553 IPR036291 NAD(P)-binding domain superfamily YPTB1553 IPR006183 6-phosphogluconate dehydrogenase YPTB1553 IPR006184 6-phosphogluconate-binding site YPTB1554 IPR002686 Transposase IS200-like YPTB1554 IPR036515 Transposase IS200-like superfamily YPTB1555 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPTB1555 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPTB1555 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPTB1555 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily YPTB1555 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPTB1556 IPR011060 Ribulose-phosphate binding barrel YPTB1556 IPR006062 Histidine biosynthesis YPTB1556 IPR013785 Aldolase-type TIM barrel YPTB1556 IPR004651 Histidine biosynthesis, HisF YPTB1557 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPTB1557 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPTB1557 IPR011060 Ribulose-phosphate binding barrel YPTB1557 IPR013785 Aldolase-type TIM barrel YPTB1557 IPR006062 Histidine biosynthesis YPTB1558 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPTB1558 IPR017926 Glutamine amidotransferase YPTB1558 IPR029062 Class I glutamine amidotransferase-like YPTB1559 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTB1559 IPR020566 Histidine biosynthesis bifunctional protein HisB YPTB1559 IPR006543 Histidinol-phosphate phosphatase YPTB1559 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily YPTB1559 IPR023214 HAD superfamily YPTB1559 IPR000807 Imidazoleglycerol-phosphate dehydratase YPTB1559 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPTB1559 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB1559 IPR005954 Histidinol-phosphatase YPTB1559 IPR036412 HAD-like superfamily YPTB1560 IPR004839 Aminotransferase, class I/classII YPTB1560 IPR005861 Histidinol-phosphate aminotransferase family YPTB1560 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1560 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTB1560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1561 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1561 IPR001692 Histidinol dehydrogenase, conserved site YPTB1561 IPR022695 Histidinol dehydrogenase, monofunctional YPTB1561 IPR012131 Histidinol dehydrogenase YPTB1562 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPTB1562 IPR018198 ATP phosphoribosyltransferase, conserved site YPTB1562 IPR001348 ATP phosphoribosyltransferase HisG YPTB1562 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB1562 IPR020621 ATP phosphoribosyltransferase HisG, long form YPTB1562 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB1562 IPR013115 Histidine biosynthesis HisG, C-terminal YPTB1563 IPR001509 NAD-dependent epimerase/dehydratase YPTB1563 IPR036291 NAD(P)-binding domain superfamily YPTB1565 IPR001851 ABC transporter, permease YPTB1566 IPR015861 ABC transporter, ribose import, RbsA YPTB1566 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1566 IPR003439 ABC transporter-like YPTB1566 IPR017871 ABC transporter, conserved site YPTB1566 IPR003593 AAA+ ATPase domain YPTB1567 IPR016205 Glycerol dehydrogenase YPTB1567 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTB1567 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTB1568 IPR002293 Amino acid/polyamine transporter I YPTB1569 IPR023607 Exodeoxyribonuclease I YPTB1569 IPR034748 Exonuclease I, C-terminal alpha-helical domain YPTB1569 IPR034747 Exonuclease I, SH3-like domain YPTB1569 IPR038649 Exonuclease I, SH3-like domain superfamily YPTB1569 IPR013620 Exodeoxyribonuclease I, C-terminal YPTB1569 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB1569 IPR012337 Ribonuclease H-like superfamily YPTB1569 IPR036397 Ribonuclease H superfamily YPTB1571 IPR007458 Protein of unknown function DUF496 YPTB1572 IPR038177 Inverse autotransporter, beta-domain superfamily YPTB1572 IPR013783 Immunoglobulin-like fold YPTB1572 IPR008964 Invasin/intimin cell-adhesion fragments YPTB1572 IPR022409 PKD/Chitinase domain YPTB1572 IPR015217 Invasin, domain 3 YPTB1572 IPR018392 LysM domain YPTB1572 IPR024519 Inverse autotransporter, beta-domain YPTB1572 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB1572 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTB1573 IPR020846 Major facilitator superfamily domain YPTB1573 IPR011701 Major facilitator superfamily YPTB1573 IPR036259 MFS transporter superfamily YPTB1574 IPR007263 Protein of unknown function DUF393 YPTB1575 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1575 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1575 IPR036291 NAD(P)-binding domain superfamily YPTB1576 IPR011234 Fumarylacetoacetase-like, C-terminal YPTB1576 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTB1577 IPR034610 L-fuconate dehydratase YPTB1577 IPR029065 Enolase C-terminal domain-like YPTB1577 IPR036849 Enolase-like, C-terminal domain superfamily YPTB1577 IPR029017 Enolase-like, N-terminal YPTB1577 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTB1577 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB1578 IPR037396 FMN hydroxy acid dehydrogenase domain YPTB1578 IPR000262 FMN-dependent dehydrogenase YPTB1578 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPTB1578 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPTB1578 IPR020920 L-lactate dehydrogenase, bacterial YPTB1578 IPR013785 Aldolase-type TIM barrel YPTB1579 IPR023437 Argininosuccinate synthase, type 2 subfamily YPTB1579 IPR018223 Argininosuccinate synthase, conserved site YPTB1579 IPR001518 Argininosuccinate synthase YPTB1579 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPTB1579 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB1579 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPTB1580 IPR002528 Multi antimicrobial extrusion protein YPTB1582 IPR002509 NodB homology domain YPTB1582 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB1582 IPR037950 Peptidoglycan deacetylase PgdA-like YPTB1584 IPR018636 Protein of unknown function DUF2058 YPTB1585 IPR017894 HTH domain, IS21 transposase-type YPTB1585 IPR036397 Ribonuclease H superfamily YPTB1585 IPR012337 Ribonuclease H-like superfamily YPTB1585 IPR006120 Resolvase, HTH domain YPTB1585 IPR001584 Integrase, catalytic core YPTB1586 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB1586 IPR001270 ClpA/B family YPTB1586 IPR002611 IstB-like ATP-binding protein YPTB1586 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1586 IPR003593 AAA+ ATPase domain YPTB1591 IPR010105 TonB-dependent siderophore receptor YPTB1591 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB1591 IPR012910 TonB-dependent receptor, plug domain YPTB1591 IPR039426 Vitamin B12 transporter BtuB-like YPTB1591 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB1592 IPR020845 AMP-binding, conserved site YPTB1592 IPR000873 AMP-dependent synthetase/ligase YPTB1592 IPR025110 AMP-binding enzyme, C-terminal domain YPTB1592 IPR011963 2,3-dihydroxybenzoate-AMP ligase YPTB1593 IPR001031 Thioesterase YPTB1593 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPTB1593 IPR020802 Polyketide synthase, thioesterase domain YPTB1593 IPR029058 Alpha/Beta hydrolase fold YPTB1595 IPR016039 Thiolase-like YPTB1595 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB1595 IPR036736 ACP-like superfamily YPTB1595 IPR001227 Acyl transferase domain superfamily YPTB1595 IPR014043 Acyl transferase YPTB1595 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTB1595 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTB1595 IPR009081 Phosphopantetheine binding ACP domain YPTB1595 IPR032821 Ketoacyl-synthetase, C-terminal extension YPTB1595 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTB1595 IPR001242 Condensation domain YPTB1595 IPR018201 Beta-ketoacyl synthase, active site YPTB1595 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB1595 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB1595 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB1596 IPR006162 Phosphopantetheine attachment site YPTB1596 IPR020845 AMP-binding, conserved site YPTB1596 IPR000873 AMP-dependent synthetase/ligase YPTB1596 IPR001242 Condensation domain YPTB1596 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTB1596 IPR013217 Methyltransferase type 12 YPTB1596 IPR042099 AMP-dependent synthetase-like superfamily YPTB1596 IPR009081 Phosphopantetheine binding ACP domain YPTB1596 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1596 IPR036736 ACP-like superfamily YPTB1596 IPR010071 Amino acid adenylation domain YPTB1596 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB1598 IPR017938 Riboflavin synthase-like beta-barrel YPTB1598 IPR003439 ABC transporter-like YPTB1598 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1598 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB1598 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB1598 IPR013113 FAD-binding 9, siderophore-interacting YPTB1598 IPR007037 Siderophore-interacting protein, C-terminal domain YPTB1598 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1598 IPR003593 AAA+ ATPase domain YPTB1598 IPR017871 ABC transporter, conserved site YPTB1598 IPR011527 ABC transporter type 1, transmembrane domain YPTB1599 IPR017871 ABC transporter, conserved site YPTB1599 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1599 IPR003593 AAA+ ATPase domain YPTB1599 IPR003439 ABC transporter-like YPTB1599 IPR011527 ABC transporter type 1, transmembrane domain YPTB1599 IPR039421 Type I protein exporter YPTB1599 IPR011917 ABC transporter, lipid A export, MsbA YPTB1599 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1600 IPR011701 Major facilitator superfamily YPTB1600 IPR036259 MFS transporter superfamily YPTB1600 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPTB1601 IPR019999 Anthranilate synthase component I-like YPTB1601 IPR005801 ADC synthase YPTB1601 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB1601 IPR019996 Salicylate synthase YPTB1603 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1603 IPR001789 Signal transduction response regulator, receiver domain YPTB1603 IPR000792 Transcription regulator LuxR, C-terminal YPTB1603 IPR011006 CheY-like superfamily YPTB1604 IPR004681 TRAP transporter large membrane protein DctM YPTB1604 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPTB1606 IPR018389 TRAP transporter solute receptor DctP/TeaA YPTB1606 IPR038404 TRAP transporter solute receptor DctP superfamily YPTB1606 IPR004682 TRAP transporter solute receptor, DctP family YPTB1607 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain YPTB1607 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPTB1607 IPR008278 4'-phosphopantetheinyl transferase domain YPTB1607 IPR003542 Enterobactin synthetase-like, component D YPTB1608 IPR038417 Alpha-galactosidase, N-terminal domain superfamily YPTB1608 IPR013785 Aldolase-type TIM barrel YPTB1608 IPR000111 Glycoside hydrolase family 27/36, conserved site YPTB1608 IPR002252 Glycoside hydrolase family 36 YPTB1608 IPR031705 Glycosyl hydrolase family 36, C-terminal YPTB1608 IPR017853 Glycoside hydrolase superfamily YPTB1608 IPR031704 Glycosyl hydrolase family 36, N-terminal YPTB1609 IPR000576 LacY/RafB permease family YPTB1609 IPR036259 MFS transporter superfamily YPTB1609 IPR018457 LacY/RafB permease family, conserved site YPTB1609 IPR020846 Major facilitator superfamily domain YPTB1610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB1610 IPR000843 LacI-type HTH domain YPTB1610 IPR028082 Periplasmic binding protein-like I YPTB1610 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB1611 IPR010384 MtfA family YPTB1611 IPR042252 MtfA, N-terminal YPTB1611 IPR024079 Metallopeptidase, catalytic domain superfamily YPTB1614 IPR039421 Type I protein exporter YPTB1614 IPR003439 ABC transporter-like YPTB1614 IPR017871 ABC transporter, conserved site YPTB1614 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1614 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB1614 IPR011527 ABC transporter type 1, transmembrane domain YPTB1614 IPR003593 AAA+ ATPase domain YPTB1615 IPR018060 DNA binding HTH domain, AraC-type YPTB1615 IPR018062 HTH domain AraC-type, conserved site YPTB1615 IPR020449 Transcription regulator HTH, AraC- type YPTB1615 IPR009057 Homeobox-like domain superfamily YPTB1616 IPR020262 Uncharacterised protein family YecJ YPTB1617 IPR025611 YobH-like protein YPTB1618 IPR025594 YebO-like protein YPTB1621 IPR004840 Amino acid permease, conserved site YPTB1621 IPR004841 Amino acid permease/ SLC12A domain YPTB1622 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB1622 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPTB1623 IPR019672 Protein of unknown function DUF2627 YPTB1624 IPR002059 Cold-shock protein, DNA-binding YPTB1624 IPR019844 Cold-shock (CSD) domain YPTB1624 IPR012156 Cold shock, CspA YPTB1624 IPR012340 Nucleic acid-binding, OB-fold YPTB1624 IPR011129 Cold shock domain YPTB1626 IPR025714 Methyltransferase domain YPTB1626 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPTB1626 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1628 IPR001633 EAL domain YPTB1628 IPR000160 GGDEF domain YPTB1628 IPR029787 Nucleotide cyclase YPTB1628 IPR001610 PAC motif YPTB1628 IPR000014 PAS domain YPTB1628 IPR000700 PAS-associated, C-terminal YPTB1628 IPR035965 PAS domain superfamily YPTB1628 IPR013655 PAS fold-3 YPTB1628 IPR007895 MASE1 YPTB1628 IPR035919 EAL domain superfamily YPTB1628 IPR013656 PAS fold-4 YPTB1629 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB1629 IPR030149 TonB-dependent siderophore receptor FcuA/FatA YPTB1629 IPR012910 TonB-dependent receptor, plug domain YPTB1629 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB1629 IPR039423 TonB-dependent receptor-like YPTB1629 IPR010916 TonB box, conserved site YPTB1629 IPR010105 TonB-dependent siderophore receptor YPTB1629 IPR010917 TonB-dependent receptor, conserved site YPTB1629 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB1630 IPR003810 Putative manganese efflux pump YPTB1630 IPR022929 Putative manganese efflux pump MntP YPTB1631 IPR009328 Protein of unknown function DUF986 YPTB1632 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPTB1633 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPTB1634 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPTB1634 IPR004701 Phosphotransferase system, mannose-type IIA component YPTB1634 IPR013789 Phosphotransferase system, mannose family IIA component YPTB1634 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPTB1634 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPTB1634 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPTB1634 IPR033887 PTS system mannose/sorbose specific IIA subunit YPTB1635 IPR005170 Transporter-associated domain YPTB1635 IPR000644 CBS domain YPTB1635 IPR036318 FAD-binding, type PCMH-like superfamily YPTB1635 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB1635 IPR005496 Integral membrane protein TerC YPTB1636 IPR012712 HTH-type transcriptional regulator HpaR/FarR YPTB1636 IPR000835 MarR-type HTH domain YPTB1636 IPR023187 Transcriptional regulator MarR-type, conserved site YPTB1636 IPR036390 Winged helix DNA-binding domain superfamily YPTB1636 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1637 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPTB1637 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPTB1637 IPR011234 Fumarylacetoacetase-like, C-terminal YPTB1637 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTB1638 IPR011234 Fumarylacetoacetase-like, C-terminal YPTB1638 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTB1638 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPTB1638 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPTB1639 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1639 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1639 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB1639 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1639 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1639 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YPTB1639 IPR015590 Aldehyde dehydrogenase domain YPTB1640 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase YPTB1640 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPTB1641 IPR014347 Tautomerase/MIF superfamily YPTB1641 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPTB1642 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTB1642 IPR011234 Fumarylacetoacetase-like, C-terminal YPTB1642 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase YPTB1643 IPR040442 Pyruvate kinase-like domain superfamily YPTB1643 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB1643 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPTB1643 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales YPTB1643 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPTB1644 IPR036259 MFS transporter superfamily YPTB1644 IPR020846 Major facilitator superfamily domain YPTB1644 IPR011701 Major facilitator superfamily YPTB1645 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPTB1645 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPTB1645 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPTB1645 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPTB1645 IPR004925 HpaB/PvcC/4-BUDH YPTB1645 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTB1645 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTB1646 IPR002563 Flavin reductase like domain YPTB1646 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPTB1646 IPR012349 FMN-binding split barrel YPTB1647 IPR005130 Serine dehydratase-like, alpha subunit YPTB1647 IPR005131 Serine dehydratase beta chain YPTB1647 IPR029009 Allosteric substrate binding domain superfamily YPTB1647 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPTB1648 IPR015797 NUDIX hydrolase-like domain superfamily YPTB1648 IPR000086 NUDIX hydrolase domain YPTB1648 IPR023735 Uncharacterised nudix hydrolase NudL YPTB1648 IPR000059 NUDIX hydrolase, NudL, conserved site YPTB1649 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB1649 IPR005801 ADC synthase YPTB1649 IPR019999 Anthranilate synthase component I-like YPTB1649 IPR005802 Aminodeoxychorismate synthase, component I YPTB1649 IPR006805 Anthranilate synthase component I, N-terminal YPTB1650 IPR005371 Uncharacterised protein family UPF0181 YPTB1651 IPR013815 ATP-grasp fold, subdomain 1 YPTB1651 IPR011761 ATP-grasp fold YPTB1651 IPR011054 Rudiment single hybrid motif YPTB1651 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase YPTB1651 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPTB1651 IPR016185 Pre-ATP-grasp domain superfamily YPTB1652 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPTB1652 IPR011545 DEAD/DEAH box helicase domain YPTB1652 IPR028619 ATP-dependent RNA helicase DbpA YPTB1652 IPR014014 RNA helicase, DEAD-box type, Q motif YPTB1652 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB1652 IPR001650 Helicase, C-terminal YPTB1652 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTB1652 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB1652 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1653 IPR009813 Uncharacterised protein family YebG YPTB1653 IPR038627 YebG-like superfamily YPTB1655 IPR038703 YebF/Cmi superfamily YPTB1655 IPR025603 YebF/Colicin-M immunity protein YPTB1655 IPR020236 Uncharacterised protein family YebF YPTB1656 IPR023302 Peptidase S9A, N-terminal domain YPTB1656 IPR002470 Peptidase S9A, prolyl oligopeptidase YPTB1656 IPR029058 Alpha/Beta hydrolase fold YPTB1656 IPR002471 Peptidase S9, serine active site YPTB1656 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPTB1657 IPR005944 Proline iminopeptidase YPTB1657 IPR002410 Peptidase S33 YPTB1657 IPR000073 Alpha/beta hydrolase fold-1 YPTB1657 IPR029058 Alpha/Beta hydrolase fold YPTB1658 IPR009052 DNA polymerase III-theta, bacterial YPTB1658 IPR036745 DNA polymerase III-theta superfamily YPTB1659 IPR001519 Ferritin YPTB1659 IPR041719 Ferritin, prokaryotic-type YPTB1659 IPR008331 Ferritin/DPS protein domain YPTB1659 IPR009078 Ferritin-like superfamily YPTB1659 IPR009040 Ferritin-like diiron domain YPTB1659 IPR012347 Ferritin-like YPTB1660 IPR032694 Copper transport protein C/D YPTB1660 IPR007348 CopC domain YPTB1660 IPR014756 Immunoglobulin E-set YPTB1662 IPR019648 Protein of unknown function DUF2511 YPTB1665 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB1665 IPR006136 Flagellar biosynthetic protein FlhB YPTB1665 IPR006135 Type III secretion system substrate exporter YPTB1666 IPR042196 FHIPEP, domain 4 YPTB1666 IPR025505 FHIPEP conserved site YPTB1666 IPR001712 Type III secretion system FHIPEP YPTB1666 IPR042194 FHIPEP, domain 1 YPTB1666 IPR042193 FHIPEP, domain 3 YPTB1666 IPR006301 Flagellar biosynthesis protein FlhA YPTB1667 IPR009420 Flagellar protein FlhE YPTB1668 IPR016187 C-type lectin fold YPTB1668 IPR024519 Inverse autotransporter, beta-domain YPTB1668 IPR038177 Inverse autotransporter, beta-domain superfamily YPTB1668 IPR013783 Immunoglobulin-like fold YPTB1668 IPR016186 C-type lectin-like/link domain superfamily YPTB1668 IPR013117 Intimin, C-terminal YPTB1668 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTB1668 IPR015217 Invasin, domain 3 YPTB1668 IPR008964 Invasin/intimin cell-adhesion fragments YPTB1668 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB1669 IPR007809 FlgN-like protein YPTB1669 IPR036679 FlgN-like superfamily YPTB1670 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPTB1670 IPR007412 Anti-sigma-28 factor, FlgM YPTB1670 IPR035890 Anti-sigma-28 factor FlgM superfamily YPTB1671 IPR013974 SAF domain YPTB1671 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB1671 IPR041231 FlgA, N-terminal YPTB1671 IPR039246 Flagellar protein FlgA YPTB1672 IPR019776 Flagellar basal body rod protein, conserved site YPTB1672 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1672 IPR006300 Flagellar basal-body rod protein FlgB YPTB1673 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1673 IPR019776 Flagellar basal body rod protein, conserved site YPTB1673 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB1673 IPR006299 Flagellar basal-body rod protein FlgC YPTB1674 IPR005648 Flagellar hook capping protein YPTB1674 IPR025963 FlgD Tudor-like domain YPTB1674 IPR025965 FlgD Ig-like domain YPTB1675 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1675 IPR011491 Flagellar hook protein FlgE YPTB1675 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB1675 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB1675 IPR037058 Flagellar hook protein FlgE superfamily YPTB1675 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB1675 IPR019776 Flagellar basal body rod protein, conserved site YPTB1676 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB1676 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB1676 IPR019776 Flagellar basal body rod protein, conserved site YPTB1676 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB1676 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1677 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB1677 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1677 IPR019776 Flagellar basal body rod protein, conserved site YPTB1677 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB1677 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB1677 IPR012834 Flagellar basal-body rod FlgG YPTB1678 IPR000527 Flagellar L-ring protein YPTB1679 IPR001782 Flagellar P-ring protein YPTB1680 IPR019301 Flagellar protein FlgJ, N-terminal YPTB1680 IPR013377 Peptidoglycan hydrolase FlgJ YPTB1680 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPTB1681 IPR002371 Flagellar hook-associated protein 1 YPTB1681 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB1681 IPR001444 Flagellar basal body rod protein, N-terminal YPTB1682 IPR013384 Flagellar hook-associated protein 3 YPTB1682 IPR001029 Flagellin, D0/D1 domain YPTB1683 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB1683 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1683 IPR007324 Sugar-binding domain, putative YPTB1683 IPR037171 NagB/RpiA transferase-like YPTB1684 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1684 IPR036291 NAD(P)-binding domain superfamily YPTB1684 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YPTB1684 IPR001303 Class II aldolase/adducin N-terminal YPTB1684 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTB1685 IPR001851 ABC transporter, permease YPTB1686 IPR025997 Periplasmic binding protein YPTB1686 IPR028082 Periplasmic binding protein-like I YPTB1686 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPTB1687 IPR003439 ABC transporter-like YPTB1687 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1687 IPR017871 ABC transporter, conserved site YPTB1687 IPR015861 ABC transporter, ribose import, RbsA YPTB1687 IPR003593 AAA+ ATPase domain YPTB1688 IPR001851 ABC transporter, permease YPTB1689 IPR002139 Ribokinase/fructokinase YPTB1689 IPR029056 Ribokinase-like YPTB1689 IPR011611 Carbohydrate kinase PfkB YPTB1689 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB1689 IPR030877 Sulfofructose kinase YPTB1691 IPR006303 Flagellar biosynthesis protein FliR YPTB1691 IPR002010 Type III secretion system inner membrane R protein YPTB1692 IPR006305 Flagellar biosynthesis protein FliQ YPTB1692 IPR002191 Bacterial export protein family 3 YPTB1693 IPR005837 Flagellar transport protein FliP YPTB1693 IPR005838 Type III secretion system inner membrane P protein YPTB1694 IPR022781 Flagellar biosynthesis protein, FliO YPTB1695 IPR036429 SpoA-like superfamily YPTB1695 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTB1695 IPR031576 Flagellar motor switch protein FliN, N-terminal YPTB1695 IPR001543 Surface presentation of antigen (SpoA) YPTB1695 IPR012826 Flagellar motor switch FliN YPTB1696 IPR001543 Surface presentation of antigen (SpoA) YPTB1696 IPR028976 CheC-like superfamily YPTB1696 IPR001689 Flagellar motor switch protein FliM YPTB1696 IPR036429 SpoA-like superfamily YPTB1697 IPR005503 Flagellar basal body-associated protein FliL YPTB1698 IPR001635 Flagellar hook-length control protein FliK YPTB1698 IPR021136 Flagellar hook-length control protein-like, C-terminal YPTB1698 IPR038610 FliK-like, C-terminal domain superfamily YPTB1699 IPR012823 Flagellar export FliJ YPTB1699 IPR018006 Flagellar FliJ, proteobacteria YPTB1700 IPR003593 AAA+ ATPase domain YPTB1700 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTB1700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1700 IPR040627 T3SS EscN ATPase, C-terminal YPTB1700 IPR005714 ATPase, type III secretion system, FliI/YscN YPTB1700 IPR032463 ATPase, type III secretion system, FliI YPTB1700 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB1700 IPR020005 Flagellar export ATPase FliI, clade 1 YPTB1701 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPTB1701 IPR000563 Flagellar assembly protein FliH YPTB1702 IPR032779 Flagellar motor switch protein FliG, middle domain YPTB1702 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPTB1702 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTB1702 IPR023087 Flagellar motor switch protein FliG, C-terminal YPTB1702 IPR000090 Flagellar motor switch protein FliG YPTB1703 IPR006182 Secretory protein YscJ/FliF YPTB1703 IPR000067 Flagellar M-ring protein FliF YPTB1703 IPR013556 Flagellar M-ring C-terminal YPTB1704 IPR001624 Flagellar hook-basal body complex protein FliE YPTB1708 IPR003265 HhH-GPD domain YPTB1708 IPR011257 DNA glycosylase YPTB1709 IPR006675 HDIG domain YPTB1709 IPR037522 HD-GYP domain YPTB1709 IPR006674 HD domain YPTB1709 IPR003607 HD/PDEase domain YPTB1710 IPR020449 Transcription regulator HTH, AraC- type YPTB1710 IPR009057 Homeobox-like domain superfamily YPTB1710 IPR018062 HTH domain AraC-type, conserved site YPTB1710 IPR018060 DNA binding HTH domain, AraC-type YPTB1711 IPR008622 Flagellar protein FliT YPTB1712 IPR003713 Flagellar protein FliS YPTB1712 IPR036584 Flagellar protein FliS superfamily YPTB1713 IPR010810 Flagellin hook, IN motif YPTB1713 IPR040026 Flagellar hook-associated protein 2 YPTB1713 IPR010809 Flagellar hook-associated protein 2, C-terminal YPTB1713 IPR003481 Flagellar hook-associated protein 2, N-terminal YPTB1714 IPR001029 Flagellin, D0/D1 domain YPTB1714 IPR001492 Flagellin YPTB1714 IPR014981 Flagellin D3 YPTB1715 IPR013325 RNA polymerase sigma factor, region 2 YPTB1715 IPR000943 RNA polymerase sigma-70 YPTB1715 IPR028617 RNA polymerase sigma factor FliA YPTB1715 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPTB1715 IPR007627 RNA polymerase sigma-70 region 2 YPTB1715 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB1715 IPR007630 RNA polymerase sigma-70 region 4 YPTB1715 IPR014284 RNA polymerase sigma-70 like domain YPTB1715 IPR007624 RNA polymerase sigma-70 region 3 YPTB1716 IPR022523 Flagellar regulator, FliZ YPTB1716 IPR004107 Integrase, SAM-like, N-terminal YPTB1717 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB1717 IPR023702 D-cysteine desulphhydrase, bacterial YPTB1717 IPR005966 D-cysteine desulfhydrase YPTB1717 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPTB1717 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB1723 IPR024082 Proline dehydrogenase PutA, domain II YPTB1723 IPR024089 Proline dehydrogenase PutA, domain I/II YPTB1723 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1723 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1723 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1723 IPR024090 Proline dehydrogenase PutA, domain I YPTB1723 IPR025703 Bifunctional protein PutA YPTB1723 IPR010985 Ribbon-helix-helix YPTB1723 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB1723 IPR029041 FAD-linked oxidoreductase-like YPTB1723 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPTB1723 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1723 IPR015590 Aldehyde dehydrogenase domain YPTB1723 IPR013321 Arc-type ribbon-helix-helix YPTB1723 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain YPTB1723 IPR002872 Proline dehydrogenase domain YPTB1724 IPR018212 Sodium/solute symporter, conserved site YPTB1724 IPR011851 Sodium/proline symporter YPTB1724 IPR038377 Sodium/glucose symporter superfamily YPTB1724 IPR001734 Sodium/solute symporter YPTB1725 IPR004923 Iron permease FTR1/Fip1/EfeU YPTB1725 IPR005217 Iron permease FTR1-like YPTB1726 IPR038352 Imelysin-like domain superfamily YPTB1726 IPR034981 EfeO/Algp7, imelysin-like domain YPTB1726 IPR018976 Imelysin-like domain YPTB1726 IPR008972 Cupredoxin YPTB1726 IPR028096 EfeO-type cupredoxin-like domain YPTB1727 IPR006313 Deferrochelatase/peroxidase EfeB YPTB1727 IPR006314 Dyp-type peroxidase YPTB1727 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB1727 IPR011008 Dimeric alpha-beta barrel YPTB1728 IPR008254 Flavodoxin/nitric oxide synthase YPTB1728 IPR029039 Flavoprotein-like superfamily YPTB1728 IPR010089 Flavoprotein WrbA-like YPTB1728 IPR005025 NADPH-dependent FMN reductase-like YPTB1728 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic YPTB1729 IPR019936 Mutatrotase, YjhT-like YPTB1729 IPR015915 Kelch-type beta propeller YPTB1729 IPR006652 Kelch repeat type 1 YPTB1730 IPR004841 Amino acid permease/ SLC12A domain YPTB1730 IPR004840 Amino acid permease, conserved site YPTB1731 IPR027385 Outer membrane protein beta-barrel domain YPTB1731 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB1731 IPR000758 Virulence-related outer membrane protein YPTB1733 IPR009707 Membrane protein GlpM/YdgC YPTB1735 IPR001789 Signal transduction response regulator, receiver domain YPTB1735 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1735 IPR000792 Transcription regulator LuxR, C-terminal YPTB1735 IPR011006 CheY-like superfamily YPTB1736 IPR038476 UvrC homology region 2 superfamily YPTB1736 IPR000305 GIY-YIG endonuclease YPTB1736 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTB1736 IPR004791 UvrABC system, subunit C YPTB1736 IPR010994 RuvA domain 2-like YPTB1736 IPR001943 UVR domain YPTB1736 IPR036876 UVR domain superfamily YPTB1736 IPR035901 GIY-YIG endonuclease superfamily YPTB1736 IPR001162 UvrC family homology region YPTB1737 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPTB1737 IPR000462 CDP-alcohol phosphatidyltransferase YPTB1737 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPTB1738 IPR007684 Zinc finger, Ogr/Delta-type YPTB1764 IPR006430 Phage portal protein PBSX family YPTB1764 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB1766 IPR008766 Replication gene A protein YPTB1769 IPR009679 Bacteriophage 186, CII YPTB1771 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB1771 IPR032499 Bacteriophage CI repressor, C-terminal YPTB1771 IPR010744 Bacteriophage CI repressor YPTB1774 IPR011931 Tyrosine recombinase XerC YPTB1774 IPR023009 Tyrosine recombinase XerC/XerD YPTB1774 IPR004107 Integrase, SAM-like, N-terminal YPTB1774 IPR010998 Integrase/recombinase, N-terminal YPTB1774 IPR002104 Integrase, catalytic domain YPTB1774 IPR013762 Integrase-like, catalytic domain superfamily YPTB1774 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB1790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB1790 IPR039418 LexA-like YPTB1790 IPR001387 Cro/C1-type helix-turn-helix domain YPTB1790 IPR015927 Peptidase S24/S26A/S26B/S26C YPTB1790 IPR036286 LexA/Signal peptidase-like superfamily YPTB1795 IPR007476 Putative exonuclease, RdgC YPTB1797 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site YPTB1797 IPR002941 DNA methylase N-4/N-6 YPTB1797 IPR001091 Restriction/modification DNA-methylase YPTB1797 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1798 IPR008593 DNA N-6-adenine-methyltransferase YPTB1804 IPR007054 Lysis protein S YPTB1805 IPR034690 Endolysin T4 type YPTB1805 IPR002196 Glycoside hydrolase, family 24 YPTB1805 IPR023346 Lysozyme-like domain superfamily YPTB1808 IPR036397 Ribonuclease H superfamily YPTB1808 IPR006120 Resolvase, HTH domain YPTB1808 IPR001584 Integrase, catalytic core YPTB1808 IPR017894 HTH domain, IS21 transposase-type YPTB1808 IPR012337 Ribonuclease H-like superfamily YPTB1809 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB1809 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1809 IPR001270 ClpA/B family YPTB1809 IPR003593 AAA+ ATPase domain YPTB1809 IPR002611 IstB-like ATP-binding protein YPTB1820 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPTB1834 IPR007684 Zinc finger, Ogr/Delta-type YPTB1841 IPR035089 Tail sheath protein, subtilisin-like domain YPTB1841 IPR020287 Tail sheath protein, C-terminal domain YPTB1860 IPR006430 Phage portal protein PBSX family YPTB1860 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB1862 IPR008766 Replication gene A protein YPTB1863 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1863 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPTB1863 IPR012263 Adenine modification methylase, M.EcoRV-type YPTB1863 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB1863 IPR023095 Adenine-specific methyltransferase, domain 2 YPTB1864 IPR036397 Ribonuclease H superfamily YPTB1864 IPR012337 Ribonuclease H-like superfamily YPTB1864 IPR035965 PAS domain superfamily YPTB1864 IPR000014 PAS domain YPTB1864 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPTB1864 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB1875 IPR013762 Integrase-like, catalytic domain superfamily YPTB1875 IPR002104 Integrase, catalytic domain YPTB1875 IPR010998 Integrase/recombinase, N-terminal YPTB1875 IPR004107 Integrase, SAM-like, N-terminal YPTB1875 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB1875 IPR011931 Tyrosine recombinase XerC YPTB1875 IPR023009 Tyrosine recombinase XerC/XerD YPTB1881 IPR036624 Hcp1-like superfamily YPTB1881 IPR008514 Type VI secretion system effector, Hcp YPTB1886 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1886 IPR041698 Methyltransferase domain 25 YPTB1886 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPTB1891 IPR009057 Homeobox-like domain superfamily YPTB1891 IPR002514 Transposase IS3/IS911family YPTB1905 IPR001207 Transposase, mutator type YPTB1911 IPR023945 N-acetylmannosamine kinase, bacterial YPTB1911 IPR000600 ROK family YPTB1912 IPR000683 Oxidoreductase, N-terminal YPTB1912 IPR004104 Oxidoreductase, C-terminal YPTB1912 IPR036291 NAD(P)-binding domain superfamily YPTB1912 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase YPTB1914 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1914 IPR035906 MetI-like superfamily YPTB1915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB1915 IPR035906 MetI-like superfamily YPTB1916 IPR003439 ABC transporter-like YPTB1916 IPR013611 Transport-associated OB, type 2 YPTB1916 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTB1916 IPR017871 ABC transporter, conserved site YPTB1916 IPR008995 Molybdate/tungstate binding, C-terminal YPTB1916 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1916 IPR003593 AAA+ ATPase domain YPTB1917 IPR008962 PapD-like superfamily YPTB1917 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB1917 IPR016148 Pili assembly chaperone, C-terminal YPTB1917 IPR013783 Immunoglobulin-like fold YPTB1917 IPR001829 Pili assembly chaperone, bacterial YPTB1917 IPR016147 Pili assembly chaperone, N-terminal YPTB1917 IPR018046 Pili assembly chaperone, conserved site YPTB1919 IPR042186 Outer membrane usher protein FimD, plug domain YPTB1919 IPR037224 PapC, N-terminal domain superfamily YPTB1919 IPR025885 PapC, N-terminal domain YPTB1919 IPR025949 PapC-like, C-terminal domain YPTB1919 IPR000015 Outer membrane usher protein YPTB1919 IPR018030 Fimbrial membrane usher, conserved site YPTB1920 IPR001829 Pili assembly chaperone, bacterial YPTB1920 IPR016147 Pili assembly chaperone, N-terminal YPTB1920 IPR016148 Pili assembly chaperone, C-terminal YPTB1920 IPR008962 PapD-like superfamily YPTB1920 IPR013783 Immunoglobulin-like fold YPTB1920 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB1920 IPR018046 Pili assembly chaperone, conserved site YPTB1922 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB1922 IPR013767 PAS fold YPTB1922 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1922 IPR000700 PAS-associated, C-terminal YPTB1922 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1922 IPR011006 CheY-like superfamily YPTB1922 IPR035965 PAS domain superfamily YPTB1922 IPR005467 Histidine kinase domain YPTB1922 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB1922 IPR036641 HPT domain superfamily YPTB1922 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB1922 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB1922 IPR001789 Signal transduction response regulator, receiver domain YPTB1922 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB1922 IPR000014 PAS domain YPTB1923 IPR001789 Signal transduction response regulator, receiver domain YPTB1923 IPR011006 CheY-like superfamily YPTB1923 IPR016032 Signal transduction response regulator, C-terminal effector YPTB1923 IPR000792 Transcription regulator LuxR, C-terminal YPTB1924 IPR003702 Acetyl-CoA hydrolase/transferase YPTB1924 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily YPTB1924 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPTB1924 IPR037171 NagB/RpiA transferase-like YPTB1925 IPR016790 Thiol ester hydratase, Rv0216, predicted YPTB1925 IPR029069 HotDog domain superfamily YPTB1925 IPR002539 MaoC-like dehydratase domain YPTB1926 IPR011206 Citrate lyase beta subunit-like YPTB1926 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB1926 IPR040442 Pyruvate kinase-like domain superfamily YPTB1926 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPTB1927 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain YPTB1927 IPR005119 LysR, substrate-binding YPTB1927 IPR000847 Transcription regulator HTH, LysR YPTB1927 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1927 IPR036390 Winged helix DNA-binding domain superfamily YPTB1931 IPR006680 Amidohydrolase-related YPTB1931 IPR032466 Metal-dependent hydrolase YPTB1933 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPTB1933 IPR003667 NqrDE/RnfAE YPTB1934 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1934 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1934 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1934 IPR004839 Aminotransferase, class I/classII YPTB1935 IPR004841 Amino acid permease/ SLC12A domain YPTB1935 IPR004840 Amino acid permease, conserved site YPTB1936 IPR037171 NagB/RpiA transferase-like YPTB1936 IPR001034 DeoR-type HTH domain YPTB1936 IPR014036 DeoR C-terminal sensor domain YPTB1936 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1936 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB1936 IPR036390 Winged helix DNA-binding domain superfamily YPTB1937 IPR015868 Glutaminase YPTB1937 IPR012338 Beta-lactamase/transpeptidase-like YPTB1939 IPR004923 Iron permease FTR1/Fip1/EfeU YPTB1940 IPR038482 Periplasmic metal-binding protein tp34-type superfamily YPTB1940 IPR018470 Periplasmic metal-binding protein Tp34-type YPTB1942 IPR003439 ABC transporter-like YPTB1942 IPR003838 ABC transporter permease protein domain YPTB1942 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1942 IPR003593 AAA+ ATPase domain YPTB1942 IPR025857 MacB-like periplasmic core domain YPTB1942 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTB1942 IPR017871 ABC transporter, conserved site YPTB1944 IPR003593 AAA+ ATPase domain YPTB1944 IPR003838 ABC transporter permease protein domain YPTB1944 IPR003439 ABC transporter-like YPTB1944 IPR017871 ABC transporter, conserved site YPTB1944 IPR025857 MacB-like periplasmic core domain YPTB1944 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTB1944 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1945 IPR023555 Thiol-disulphide oxidoreductase ResA YPTB1945 IPR036249 Thioredoxin-like superfamily YPTB1945 IPR013766 Thioredoxin domain YPTB1945 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTB1947 IPR014710 RmlC-like jelly roll fold YPTB1947 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1947 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPTB1947 IPR004537 Tellurite resistance methyltransferase, TehB YPTB1947 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPTB1947 IPR015392 Domain of unknown function DUF1971 YPTB1948 IPR000994 Peptidase M24 YPTB1948 IPR036005 Creatinase/aminopeptidase-like YPTB1948 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB1949 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB1949 IPR013026 Tetratricopeptide repeat-containing domain YPTB1949 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPTB1949 IPR019734 Tetratricopeptide repeat YPTB1950 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB1950 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal YPTB1950 IPR002509 NodB homology domain YPTB1950 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPTB1951 IPR001173 Glycosyltransferase 2-like YPTB1951 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPTB1951 IPR029044 Nucleotide-diphospho-sugar transferases YPTB1952 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPTB1955 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1955 IPR003714 PhoH-like protein YPTB1956 IPR004837 Sodium/calcium exchanger membrane region YPTB1956 IPR004713 Calcium/proton exchanger YPTB1957 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1957 IPR003660 HAMP domain YPTB1957 IPR005467 Histidine kinase domain YPTB1957 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPTB1957 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1957 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPTB1957 IPR042295 NarX-like, N-terminal domain superfamily YPTB1957 IPR029095 NarX-like, N-terminal YPTB1958 IPR036390 Winged helix DNA-binding domain superfamily YPTB1958 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1958 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1958 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1958 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1958 IPR004839 Aminotransferase, class I/classII YPTB1958 IPR000524 Transcription regulator HTH, GntR YPTB1959 IPR005814 Aminotransferase class-III YPTB1959 IPR026330 Succinylornithine transaminase YPTB1959 IPR004636 Acetylornithine/Succinylornithine transaminase family YPTB1959 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB1959 IPR015424 Pyridoxal phosphate-dependent transferase YPTB1959 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB1959 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPTB1960 IPR017650 Arginine N-succinyltransferase YPTB1960 IPR007041 Arginine N-succinyltransferase AstA/AruG YPTB1960 IPR016181 Acyl-CoA N-acyltransferase YPTB1961 IPR015590 Aldehyde dehydrogenase domain YPTB1961 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB1961 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB1961 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB1961 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB1961 IPR016161 Aldehyde/histidinol dehydrogenase YPTB1961 IPR017649 Succinylglutamate-semialdehyde dehydrogenase YPTB1962 IPR037031 Succinylarginine dihydrolase superfamily YPTB1962 IPR007079 Succinylarginine dihydrolase YPTB1963 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPTB1963 IPR016681 Succinylglutamate desuccinylase YPTB1964 IPR001897 Porin, gammaproteobacterial YPTB1964 IPR023614 Porin domain superfamily YPTB1964 IPR033900 Porin domain, Gram-negative type YPTB1964 IPR013793 Porin, Gram-negative type, conserved site YPTB1964 IPR001702 Porin, Gram-negative type YPTB1966 IPR032466 Metal-dependent hydrolase YPTB1966 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB1966 IPR005920 Imidazolonepropionase YPTB1966 IPR006680 Amidohydrolase-related YPTB1967 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTB1967 IPR000524 Transcription regulator HTH, GntR YPTB1967 IPR010248 Histidine utilization repressor YPTB1967 IPR036390 Winged helix DNA-binding domain superfamily YPTB1967 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1967 IPR011663 UbiC transcription regulator-associated YPTB1968 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB1968 IPR023512 Deaminase MtaD/DadD YPTB1968 IPR006680 Amidohydrolase-related YPTB1968 IPR032466 Metal-dependent hydrolase YPTB1971 IPR016039 Thiolase-like YPTB1971 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPTB1971 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPTB1971 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPTB1972 IPR001509 NAD-dependent epimerase/dehydratase YPTB1972 IPR036291 NAD(P)-binding domain superfamily YPTB1984 IPR016584 Methyltransferase VrtF-like YPTB1984 IPR013217 Methyltransferase type 12 YPTB1984 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB1985 IPR036291 NAD(P)-binding domain superfamily YPTB1985 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB1985 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB1992 IPR005467 Histidine kinase domain YPTB1992 IPR006290 Heavy metal sensor kinase YPTB1992 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB1992 IPR003660 HAMP domain YPTB1992 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB1992 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB1992 IPR003594 Histidine kinase/HSP90-like ATPase YPTB1992 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB1993 IPR011006 CheY-like superfamily YPTB1993 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB1993 IPR001789 Signal transduction response regulator, receiver domain YPTB1993 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPTB1993 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB1993 IPR039420 Transcriptional regulatory protein WalR-like YPTB1994 IPR029058 Alpha/Beta hydrolase fold YPTB1994 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain YPTB1998 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB1998 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPTB1998 IPR012676 TGS-like YPTB1998 IPR012675 Beta-grasp domain superfamily YPTB1998 IPR023192 TGS-like domain superfamily YPTB1998 IPR013029 YchF, C-terminal domain YPTB1998 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPTB1998 IPR004095 TGS YPTB1998 IPR006073 GTP binding domain YPTB1998 IPR041706 YchF, N-terminal YPTB1999 IPR036416 Peptidyl-tRNA hydrolase superfamily YPTB1999 IPR001328 Peptidyl-tRNA hydrolase YPTB1999 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPTB2000 IPR019698 Protein of unknown function DUF2583 YPTB2001 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type YPTB2001 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPTB2001 IPR005946 Ribose-phosphate pyrophosphokinase YPTB2001 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPTB2001 IPR029057 Phosphoribosyltransferase-like YPTB2001 IPR000836 Phosphoribosyltransferase domain YPTB2002 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPTB2002 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB2002 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB2002 IPR013750 GHMP kinase, C-terminal domain YPTB2002 IPR036554 GHMP kinase, C-terminal domain superfamily YPTB2002 IPR006204 GHMP kinase N-terminal domain YPTB2003 IPR004565 Outer membrane lipoprotein LolB YPTB2003 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTB2004 IPR018214 Glutamyl-tRNA reductase, conserved site YPTB2004 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPTB2004 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily YPTB2004 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily YPTB2004 IPR036291 NAD(P)-binding domain superfamily YPTB2004 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPTB2004 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTB2004 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPTB2005 IPR004373 Peptide chain release factor 1 YPTB2005 IPR000352 Peptide chain release factor class I YPTB2005 IPR005139 Peptide chain release factor YPTB2006 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB2006 IPR004556 Methyltransferase HemK-like YPTB2006 IPR040758 Release factor glutamine methyltransferase, N-terminal domain YPTB2006 IPR025714 Methyltransferase domain YPTB2006 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2006 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPTB2007 IPR007360 Invasion gene expression up-regulator, SirB YPTB2008 IPR032698 Protein SirB1, N-terminal YPTB2009 IPR006269 3-deoxy-8-phosphooctulonate synthase YPTB2009 IPR006218 DAHP synthetase I/KDSA YPTB2009 IPR013785 Aldolase-type TIM barrel YPTB2010 IPR036515 Transposase IS200-like superfamily YPTB2010 IPR002686 Transposase IS200-like YPTB2011 IPR001902 SLC26A/SulP transporter YPTB2011 IPR018045 Sulphate anion transporter, conserved site YPTB2011 IPR036513 STAS domain superfamily YPTB2011 IPR002645 STAS domain YPTB2011 IPR011547 SLC26A/SulP transporter domain YPTB2012 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTB2012 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTB2015 IPR035906 MetI-like superfamily YPTB2015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2016 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTB2016 IPR013611 Transport-associated OB, type 2 YPTB2016 IPR003439 ABC transporter-like YPTB2016 IPR017871 ABC transporter, conserved site YPTB2016 IPR003593 AAA+ ATPase domain YPTB2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2016 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTB2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTB2017 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTB2018 IPR036390 Winged helix DNA-binding domain superfamily YPTB2018 IPR022687 DTXR-type HTH domain YPTB2018 IPR000600 ROK family YPTB2018 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2019 IPR023710 Probable phosphatase YcdX YPTB2019 IPR016195 Polymerase/histidinol phosphatase-like YPTB2019 IPR004013 PHP domain YPTB2019 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTB2020 IPR036411 TorD-like superfamily YPTB2020 IPR020945 DMSO/Nitrate reductase chaperone YPTB2020 IPR026269 Tat proofreading chaperone DmsD-type YPTB2021 IPR010835 Protein of unknown function DUF1439 YPTB2022 IPR036259 MFS transporter superfamily YPTB2022 IPR011701 Major facilitator superfamily YPTB2022 IPR022855 Multidrug resistance protein MdtH YPTB2022 IPR020846 Major facilitator superfamily domain YPTB2023 IPR016181 Acyl-CoA N-acyltransferase YPTB2023 IPR000182 GNAT domain YPTB2024 IPR007432 Protein of unknown function DUF480 YPTB2024 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2024 IPR036390 Winged helix DNA-binding domain superfamily YPTB2025 IPR036291 NAD(P)-binding domain superfamily YPTB2025 IPR000683 Oxidoreductase, N-terminal YPTB2026 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTB2027 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB2027 IPR005565 Haemolysin activator HlyB, C-terminal YPTB2027 IPR035251 ShlB, POTRA domain YPTB2027 IPR034746 POTRA domain YPTB2027 IPR027282 Two partner secretion pathway transporter YPTB2028 IPR012334 Pectin lyase fold YPTB2028 IPR025157 Hemagglutinin repeat YPTB2028 IPR011050 Pectin lyase fold/virulence factor YPTB2028 IPR008638 Filamentous haemagglutinin, N-terminal YPTB2029 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily YPTB2029 IPR035684 Arginyl-tRNA synthetase, catalytic core domain YPTB2029 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB2029 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2029 IPR001278 Arginine-tRNA ligase YPTB2029 IPR005148 Arginyl tRNA synthetase N-terminal domain YPTB2029 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTB2029 IPR008909 DALR anticodon binding YPTB2030 IPR010393 Protein of unknown function DUF991 YPTB2030 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB2031 IPR023648 Copper homeostasis CutC domain YPTB2031 IPR005627 Copper homeostasis protein CutC YPTB2031 IPR036822 Copper homeostasis (CutC) domain superfamily YPTB2032 IPR010017 tRNA U34 carboxymethyltransferase YPTB2032 IPR027555 tRNA (mo5U34)-methyltransferase-like YPTB2032 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2033 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPTB2033 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2033 IPR041698 Methyltransferase domain 25 YPTB2034 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YPTB2034 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPTB2035 IPR036520 UPF0759 superfamily YPTB2035 IPR002763 Protein of unknown function DUF72 YPTB2036 IPR029351 GAD domain YPTB2036 IPR004115 GAD-like domain superfamily YPTB2036 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTB2036 IPR012340 Nucleic acid-binding, OB-fold YPTB2036 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPTB2036 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB2036 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTB2036 IPR004524 Aspartate-tRNA ligase, type 1 YPTB2037 IPR020084 NUDIX hydrolase, conserved site YPTB2037 IPR003564 Dihydroneopterin triphosphate diphosphatase YPTB2037 IPR000086 NUDIX hydrolase domain YPTB2037 IPR015797 NUDIX hydrolase-like domain superfamily YPTB2038 IPR002876 Transcriptional regulator TACO1-like YPTB2038 IPR017856 Integrase-like, N-terminal YPTB2038 IPR029072 YebC-like YPTB2038 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPTB2039 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPTB2039 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPTB2039 IPR036397 Ribonuclease H superfamily YPTB2039 IPR012337 Ribonuclease H-like superfamily YPTB2040 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPTB2040 IPR011114 Holliday junction DNA helicase RuvA, C-terminal YPTB2040 IPR036267 RuvA, C-terminal domain superfamily YPTB2040 IPR000085 Bacterial DNA recombination protein RuvA YPTB2040 IPR010994 RuvA domain 2-like YPTB2040 IPR012340 Nucleic acid-binding, OB-fold YPTB2040 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTB2041 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2041 IPR004605 DNA helicase, Holliday junction RuvB-type YPTB2041 IPR041445 RuvB, AAA lid domain YPTB2041 IPR036390 Winged helix DNA-binding domain superfamily YPTB2041 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2041 IPR008823 RuvB C-terminal winged helix domain YPTB2041 IPR008824 RuvB-like P-loop domain YPTB2041 IPR003593 AAA+ ATPase domain YPTB2042 IPR037294 ABC transporter, BtuC-like YPTB2042 IPR001626 ABC transporter, TroCD-like YPTB2043 IPR003439 ABC transporter-like YPTB2043 IPR003593 AAA+ ATPase domain YPTB2043 IPR017882 Zinc import ATP-binding protein ZnuC YPTB2043 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2044 IPR035520 High-affinity zinc uptake system protein ZnuA YPTB2044 IPR006127 Periplasmic solute binding protein, ZnuA-like YPTB2045 IPR018392 LysM domain YPTB2045 IPR011055 Duplicated hybrid motif YPTB2045 IPR013731 Opacity-associated protein A, N-terminal YPTB2045 IPR016047 Peptidase M23 YPTB2046 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTB2046 IPR011921 Lipid A biosynthesis myristoyltransferase YPTB2047 IPR018209 Pyruvate kinase, active site YPTB2047 IPR015795 Pyruvate kinase, C-terminal YPTB2047 IPR015793 Pyruvate kinase, barrel YPTB2047 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTB2047 IPR040442 Pyruvate kinase-like domain superfamily YPTB2047 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB2047 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPTB2047 IPR001697 Pyruvate kinase YPTB2047 IPR015806 Pyruvate kinase, insert domain superfamily YPTB2048 IPR000281 Helix-turn-helix protein RpiR YPTB2048 IPR035472 RpiR-like, SIS domain YPTB2048 IPR001347 Sugar isomerase (SIS) YPTB2048 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2048 IPR009057 Homeobox-like domain superfamily YPTB2049 IPR036291 NAD(P)-binding domain superfamily YPTB2049 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPTB2049 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPTB2049 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPTB2049 IPR001282 Glucose-6-phosphate dehydrogenase YPTB2050 IPR013785 Aldolase-type TIM barrel YPTB2050 IPR031338 KDPG/KHG aldolase, active site 2 YPTB2050 IPR031337 KDPG/KHG aldolase, active site 1 YPTB2050 IPR000887 KDPG/KHG aldolase YPTB2051 IPR000390 Small multidrug resistance protein family YPTB2051 IPR023740 Spermidine export protein MdtJ YPTB2052 IPR023737 Spermidine export protein MdtI YPTB2052 IPR000390 Small multidrug resistance protein family YPTB2053 IPR006175 YjgF/YER057c/UK114 family YPTB2053 IPR035709 RutC family, YoaB-like YPTB2053 IPR035959 RutC-like superfamily YPTB2053 IPR019897 RidA, conserved site YPTB2054 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB2054 IPR006555 ATP-dependent helicase, C-terminal YPTB2054 IPR006935 Helicase/UvrB, N-terminal YPTB2054 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2054 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPTB2055 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB YPTB2055 IPR000905 Gcp-like domain YPTB2056 IPR004658 Outer membrane lipoprotein Slp YPTB2057 IPR020845 AMP-binding, conserved site YPTB2057 IPR000873 AMP-dependent synthetase/ligase YPTB2057 IPR025110 AMP-binding enzyme, C-terminal domain YPTB2057 IPR042099 AMP-dependent synthetase-like superfamily YPTB2058 IPR036397 Ribonuclease H superfamily YPTB2058 IPR012337 Ribonuclease H-like superfamily YPTB2058 IPR006292 Ribonuclease D YPTB2058 IPR002121 HRDC domain YPTB2058 IPR010997 HRDC-like superfamily YPTB2058 IPR002562 3'-5' exonuclease domain YPTB2059 IPR005527 Cell division topological specificity factor MinE YPTB2059 IPR036707 Cell division topological specificity factor MinE superfamily YPTB2060 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPTB2060 IPR010223 ATP binding protein MinD, bacterial-type YPTB2060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2060 IPR025501 ATP binding protein MinD YPTB2061 IPR005526 Septum formation inhibitor MinC, C-terminal YPTB2061 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPTB2061 IPR007874 Septum formation inhibitor MinC, N-terminal YPTB2061 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily YPTB2061 IPR013033 Septum formation inhibitor MinC YPTB2061 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily YPTB2062 IPR038068 YcgL-like superfamily YPTB2062 IPR027354 YcgL domain YPTB2063 IPR023346 Lysozyme-like domain superfamily YPTB2063 IPR031304 Transglycosylase SLT domain 2 YPTB2063 IPR011757 Lytic transglycosylase MltB YPTB2064 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTB2064 IPR011234 Fumarylacetoacetase-like, C-terminal YPTB2065 IPR008228 Uncharacterised conserved protein UCP006173 YPTB2065 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTB2067 IPR016454 Cysteine desulfurase YPTB2067 IPR000192 Aminotransferase class V domain YPTB2067 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB2067 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2067 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2067 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2067 IPR010240 Cysteine desulfurase IscS YPTB2070 IPR023380 DsbB-like superfamily YPTB2070 IPR022920 Disulphide bond formation protein DsbB YPTB2070 IPR003752 Disulphide bond formation protein DsbB/BdbC YPTB2071 IPR004671 Na+/H+ antiporter NhaB YPTB2072 IPR028374 FadR, C-terminal domain YPTB2072 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB2072 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2072 IPR036390 Winged helix DNA-binding domain superfamily YPTB2072 IPR014178 Fatty acid response transcription factor FadR YPTB2072 IPR000524 Transcription regulator HTH, GntR YPTB2073 IPR007390 Sporulation stage V, protein R YPTB2074 IPR023080 D-amino acid dehydrogenase DadA YPTB2074 IPR006076 FAD dependent oxidoreductase YPTB2074 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2075 IPR020846 Major facilitator superfamily domain YPTB2075 IPR036259 MFS transporter superfamily YPTB2075 IPR023697 Multidrug resistance protein MdtL YPTB2075 IPR011701 Major facilitator superfamily YPTB2076 IPR012093 Pirin YPTB2076 IPR008778 Pirin, C-terminal domain YPTB2076 IPR003829 Pirin, N-terminal domain YPTB2076 IPR014710 RmlC-like jelly roll fold YPTB2076 IPR011051 RmlC-like cupin domain superfamily YPTB2077 IPR036390 Winged helix DNA-binding domain superfamily YPTB2077 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2077 IPR000847 Transcription regulator HTH, LysR YPTB2077 IPR005119 LysR, substrate-binding YPTB2079 IPR006698 Uncharacterised protein family UPF0229 YPTB2080 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2080 IPR016230 Serine-protein kinase, PrkA YPTB2080 IPR013153 PrkA AAA domain YPTB2080 IPR010650 PrkA C-terminal domain YPTB2081 IPR010583 MltA-interacting MipA YPTB2082 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTB2082 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPTB2082 IPR011013 Galactose mutarotase-like domain superfamily YPTB2082 IPR025532 Glucose-6-phosphate 1-epimerase YPTB2083 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPTB2083 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPTB2083 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPTB2083 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPTB2083 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPTB2083 IPR036291 NAD(P)-binding domain superfamily YPTB2084 IPR002579 Peptide methionine sulphoxide reductase MrsB YPTB2084 IPR028427 Peptide methionine sulfoxide reductase YPTB2084 IPR011057 Mss4-like superfamily YPTB2085 IPR009749 Protein of unknown function DUF1315 YPTB2086 IPR036380 Isochorismatase-like superfamily YPTB2086 IPR000868 Isochorismatase-like YPTB2087 IPR040919 Asparaginase/glutaminase, C-terminal YPTB2087 IPR037152 L-asparaginase, N-terminal domain superfamily YPTB2087 IPR027474 L-asparaginase, N-terminal YPTB2087 IPR027475 Asparaginase/glutaminase, active site 2 YPTB2087 IPR020827 Asparaginase/glutaminase, active site 1 YPTB2087 IPR006034 Asparaginase/glutaminase-like YPTB2087 IPR036152 Asparaginase/glutaminase-like superfamily YPTB2087 IPR006033 Type I L-asparaginase family YPTB2087 IPR041725 Type I (cytosolic) L-asparaginase YPTB2087 IPR027473 L-asparaginase, C-terminal YPTB2088 IPR004634 Peptidase S49, protease IV YPTB2088 IPR004635 Peptidase S49, SppA YPTB2088 IPR029045 ClpP/crotonase-like domain superfamily YPTB2088 IPR033854 Signal peptide peptidase A YPTB2088 IPR002142 Peptidase S49 YPTB2089 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPTB2089 IPR000415 Nitroreductase-like YPTB2089 IPR029479 Nitroreductase YPTB2090 IPR016188 PurM-like, N-terminal domain YPTB2090 IPR036676 PurM-like, C-terminal domain superfamily YPTB2090 IPR036921 PurM-like, N-terminal domain superfamily YPTB2090 IPR010918 PurM-like, C-terminal domain YPTB2090 IPR004536 Selenophosphate synthetase YPTB2090 IPR023061 Selenophosphate synthetase, class I YPTB2091 IPR003601 DNA topoisomerase, type IA, domain 2 YPTB2091 IPR023406 DNA topoisomerase, type IA, active site YPTB2091 IPR013497 DNA topoisomerase, type IA, central YPTB2091 IPR023405 DNA topoisomerase, type IA, core domain YPTB2091 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB2091 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPTB2091 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPTB2091 IPR005738 DNA topoisomerase III YPTB2091 IPR000380 DNA topoisomerase, type IA YPTB2091 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB2091 IPR006171 TOPRIM domain YPTB2091 IPR034144 DNA topoisomerase 3-like, TOPRIM domain YPTB2092 IPR009971 Protein of unknown function DUF1496 YPTB2093 IPR015797 NUDIX hydrolase-like domain superfamily YPTB2093 IPR020084 NUDIX hydrolase, conserved site YPTB2093 IPR000086 NUDIX hydrolase domain YPTB2093 IPR020476 NUDIX hydrolase YPTB2094 IPR004808 AP endonuclease 1 YPTB2094 IPR020847 AP endonuclease 1, binding site YPTB2094 IPR020848 AP endonuclease 1, conserved site YPTB2094 IPR037493 Exodeoxyribonuclease III-like YPTB2094 IPR005135 Endonuclease/exonuclease/phosphatase YPTB2094 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPTB2095 IPR000847 Transcription regulator HTH, LysR YPTB2095 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2095 IPR036390 Winged helix DNA-binding domain superfamily YPTB2095 IPR005119 LysR, substrate-binding YPTB2096 IPR001207 Transposase, mutator type YPTB2097 IPR004810 Formyltetrahydrofolate deformylase YPTB2097 IPR036477 Formyl transferase, N-terminal domain superfamily YPTB2097 IPR002376 Formyl transferase, N-terminal YPTB2097 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain YPTB2097 IPR002912 ACT domain YPTB2098 IPR004027 SEC-C motif YPTB2098 IPR023006 Uncharacterised protein family UPF0225 YPTB2098 IPR032710 NTF2-like domain superfamily YPTB2099 IPR039420 Transcriptional regulatory protein WalR-like YPTB2099 IPR001789 Signal transduction response regulator, receiver domain YPTB2099 IPR028616 Regulator of RpoS YPTB2099 IPR011006 CheY-like superfamily YPTB2099 IPR036457 PPM-type phosphatase domain superfamily YPTB2100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPTB2100 IPR036291 NAD(P)-binding domain superfamily YPTB2100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB2100 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPTB2100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPTB2100 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPTB2100 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPTB2100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPTB2101 IPR027444 Histone-like protein H-NS, C-terminal domain YPTB2101 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily YPTB2101 IPR001801 Histone-like protein H-NS YPTB2101 IPR027454 Histone-like protein H-NS, N-terminal YPTB2102 IPR020633 Thymidine kinase, conserved site YPTB2102 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2102 IPR001267 Thymidine kinase YPTB2103 IPR039697 Iron-type alcohol dehydrogenase-like YPTB2103 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPTB2103 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB2103 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB2103 IPR016161 Aldehyde/histidinol dehydrogenase YPTB2103 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTB2103 IPR015590 Aldehyde dehydrogenase domain YPTB2103 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTB2103 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain YPTB2104 IPR002771 Multiple antibiotic resistance (MarC)-related YPTB2105 IPR039424 Solute-binding protein family 5 YPTB2105 IPR023765 Solute-binding protein family 5, conserved site YPTB2105 IPR000914 Solute-binding protein family 5 domain YPTB2105 IPR030678 Peptide/nickel binding protein, MppA-type YPTB2106 IPR035906 MetI-like superfamily YPTB2106 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2107 IPR035906 MetI-like superfamily YPTB2107 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB2107 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2108 IPR017871 ABC transporter, conserved site YPTB2108 IPR003439 ABC transporter-like YPTB2108 IPR003593 AAA+ ATPase domain YPTB2108 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB2108 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2109 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2109 IPR003439 ABC transporter-like YPTB2109 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB2109 IPR017871 ABC transporter, conserved site YPTB2109 IPR003593 AAA+ ATPase domain YPTB2110 IPR036763 Putative dsDNA mimic superfamily YPTB2110 IPR007376 dsDNA mimic, putative YPTB2111 IPR022924 Cardiolipin synthase YPTB2111 IPR030840 Cardiolipin synthase A YPTB2111 IPR027379 Cardiolipin synthase N-terminal YPTB2111 IPR025202 Phospholipase D-like domain YPTB2111 IPR001736 Phospholipase D/Transphosphatidylase YPTB2113 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB2113 IPR027385 Outer membrane protein beta-barrel domain YPTB2113 IPR000758 Virulence-related outer membrane protein YPTB2116 IPR005545 YCII-related YPTB2116 IPR011008 Dimeric alpha-beta barrel YPTB2117 IPR037682 TonB, C-terminal YPTB2117 IPR003538 Gram-negative bacterial TonB protein YPTB2117 IPR006260 TonB/TolA, C-terminal YPTB2118 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase YPTB2118 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain YPTB2118 IPR029069 HotDog domain superfamily YPTB2118 IPR006683 Thioesterase domain YPTB2119 IPR006008 Intracellular septation protein A YPTB2121 IPR009627 Uncharacterised protein family UPF0259 YPTB2123 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB2123 IPR005618 Outer membrane protein, OmpW YPTB2125 IPR013785 Aldolase-type TIM barrel YPTB2125 IPR018204 Tryptophan synthase, alpha chain, active site YPTB2125 IPR002028 Tryptophan synthase, alpha chain YPTB2125 IPR011060 Ribulose-phosphate binding barrel YPTB2126 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB2126 IPR006653 Tryptophan synthase, beta chain, conserved site YPTB2126 IPR006654 Tryptophan synthase, beta chain YPTB2126 IPR023026 Tryptophan synthase beta chain/beta chain-like YPTB2126 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB2127 IPR013785 Aldolase-type TIM barrel YPTB2127 IPR011060 Ribulose-phosphate binding barrel YPTB2127 IPR013798 Indole-3-glycerol phosphate synthase YPTB2127 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPTB2127 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) YPTB2128 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTB2128 IPR000312 Glycosyl transferase, family 3 YPTB2128 IPR005940 Anthranilate phosphoribosyl transferase YPTB2128 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTB2128 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB2129 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPTB2129 IPR017926 Glutamine amidotransferase YPTB2129 IPR029062 Class I glutamine amidotransferase-like YPTB2130 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB2130 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPTB2130 IPR006805 Anthranilate synthase component I, N-terminal YPTB2130 IPR019999 Anthranilate synthase component I-like YPTB2130 IPR005801 ADC synthase YPTB2133 IPR004013 PHP domain YPTB2133 IPR016195 Polymerase/histidinol phosphatase-like YPTB2133 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTB2134 IPR006070 YrdC-like domain YPTB2134 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTB2135 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTB2135 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTB2135 IPR036986 RNA-binding S4 domain superfamily YPTB2135 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB2135 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB2135 IPR002942 RNA-binding S4 domain YPTB2136 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPTB2136 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2137 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB2137 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB2137 IPR036291 NAD(P)-binding domain superfamily YPTB2138 IPR013703 Peptidase S49, N-terminal proteobacteria YPTB2138 IPR002142 Peptidase S49 YPTB2138 IPR029045 ClpP/crotonase-like domain superfamily YPTB2139 IPR038191 YciN superfamily YPTB2139 IPR019633 Protein of unknown function DUF2498 YPTB2140 IPR023406 DNA topoisomerase, type IA, active site YPTB2140 IPR003601 DNA topoisomerase, type IA, domain 2 YPTB2140 IPR000380 DNA topoisomerase, type IA YPTB2140 IPR013497 DNA topoisomerase, type IA, central YPTB2140 IPR006171 TOPRIM domain YPTB2140 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTB2140 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPTB2140 IPR028612 DNA topoisomerase I, type IA YPTB2140 IPR034149 DNA topoisomerase 1, TOPRIM domain YPTB2140 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPTB2140 IPR005733 DNA topoisomerase I, bacterial-type YPTB2140 IPR023405 DNA topoisomerase, type IA, core domain YPTB2140 IPR013498 DNA topoisomerase, type IA, zn finger YPTB2140 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTB2140 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPTB2141 IPR005119 LysR, substrate-binding YPTB2141 IPR000847 Transcription regulator HTH, LysR YPTB2141 IPR036390 Winged helix DNA-binding domain superfamily YPTB2141 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2143 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTB2143 IPR006249 Aconitase/Iron-responsive element-binding protein 2 YPTB2143 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTB2143 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTB2143 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPTB2143 IPR036008 Aconitase, iron-sulfur domain YPTB2143 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTB2144 IPR000926 GTP cyclohydrolase II, RibA YPTB2144 IPR032677 GTP cyclohydrolase II YPTB2144 IPR036144 RibA-like superfamily YPTB2145 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTB2145 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTB2146 IPR010445 Lipopolysaccharide assembly protein A domain YPTB2146 IPR032906 Lipopolysaccharide assembly protein A YPTB2147 IPR019734 Tetratricopeptide repeat YPTB2147 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB2147 IPR030865 Lipopolysaccharide assembly protein B YPTB2147 IPR041166 LapB, rubredoxin metal binding domain YPTB2147 IPR013026 Tetratricopeptide repeat-containing domain YPTB2149 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPTB2149 IPR011060 Ribulose-phosphate binding barrel YPTB2149 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPTB2149 IPR013785 Aldolase-type TIM barrel YPTB2149 IPR014732 Orotidine 5'-phosphate decarboxylase YPTB2150 IPR036877 SUI1 domain superfamily YPTB2150 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPTB2150 IPR001950 SUI1 domain YPTB2151 IPR008816 Glycine zipper 2TM domain YPTB2152 IPR004661 L-ribulose-5-phosphate 4-epimerase YPTB2152 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPTB2152 IPR001303 Class II aldolase/adducin N-terminal YPTB2152 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTB2154 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial YPTB2154 IPR013785 Aldolase-type TIM barrel YPTB2154 IPR023001 Fructose-6-phosphate aldolase YPTB2154 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPTB2154 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase YPTB2154 IPR018225 Transaldolase, active site YPTB2155 IPR007423 Selenoprotein, putative YPTB2156 IPR025299 CstA, C-terminal domain YPTB2156 IPR003706 CstA, N-terminal domain YPTB2157 IPR012340 Nucleic acid-binding, OB-fold YPTB2157 IPR001900 Ribonuclease II/R YPTB2157 IPR013223 Ribonuclease B, N-terminal OB domain YPTB2157 IPR040476 RNase II/RNase R, cold shock domain YPTB2157 IPR022966 Ribonuclease II/R, conserved site YPTB2157 IPR004476 Ribonuclease II/ribonuclease R YPTB2157 IPR003029 S1 domain YPTB2157 IPR011129 Cold shock domain YPTB2157 IPR011804 Ribonuclease II YPTB2158 IPR011701 Major facilitator superfamily YPTB2158 IPR020846 Major facilitator superfamily domain YPTB2158 IPR036259 MFS transporter superfamily YPTB2159 IPR036291 NAD(P)-binding domain superfamily YPTB2159 IPR001509 NAD-dependent epimerase/dehydratase YPTB2160 IPR004035 Endonuclease III, iron-sulphur binding site YPTB2160 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPTB2160 IPR011257 DNA glycosylase YPTB2160 IPR005759 Endonuclease III YPTB2160 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTB2160 IPR000445 Helix-hairpin-helix motif YPTB2160 IPR003265 HhH-GPD domain YPTB2160 IPR004036 Endonuclease III-like, conserved site-2 YPTB2161 IPR003667 NqrDE/RnfAE YPTB2161 IPR010968 Ion-translocating oxidoreductase complex subunit E YPTB2162 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG YPTB2162 IPR007329 FMN-binding YPTB2163 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPTB2163 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D YPTB2164 IPR011256 Regulatory factor, effector binding domain superfamily YPTB2164 IPR020449 Transcription regulator HTH, AraC- type YPTB2164 IPR009057 Homeobox-like domain superfamily YPTB2164 IPR018062 HTH domain AraC-type, conserved site YPTB2164 IPR018060 DNA binding HTH domain, AraC-type YPTB2164 IPR010499 Bacterial transcription activator, effector binding YPTB2164 IPR029442 GyrI-like small molecule binding domain YPTB2165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2165 IPR009051 Alpha-helical ferredoxin YPTB2165 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC YPTB2165 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPTB2165 IPR019554 Soluble ligand binding domain YPTB2165 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPTB2165 IPR026902 RnfC Barrel sandwich hybrid domain YPTB2166 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB YPTB2166 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria YPTB2166 IPR011005 Dihydropteroate synthase-like YPTB2166 IPR007202 4Fe-4S domain YPTB2166 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2166 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2167 IPR003667 NqrDE/RnfAE YPTB2167 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA YPTB2168 IPR019690 Protein of unknown function DUF2569 YPTB2169 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB2169 IPR005074 Peptidase C39, bacteriocin processing YPTB2169 IPR039395 Peptidase C39-like A YPTB2169 IPR039421 Type I protein exporter YPTB2169 IPR003439 ABC transporter-like YPTB2169 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2169 IPR011527 ABC transporter type 1, transmembrane domain YPTB2169 IPR003593 AAA+ ATPase domain YPTB2169 IPR010132 ATPase, type I secretion system, HlyB YPTB2169 IPR017871 ABC transporter, conserved site YPTB2170 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTB2170 IPR010129 Type I secretion membrane fusion protein, HlyD family YPTB2170 IPR006144 Secretion protein HlyD, conserved site YPTB2171 IPR039395 Peptidase C39-like A YPTB2171 IPR005074 Peptidase C39, bacteriocin processing YPTB2171 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2171 IPR010132 ATPase, type I secretion system, HlyB YPTB2171 IPR017871 ABC transporter, conserved site YPTB2171 IPR003439 ABC transporter-like YPTB2171 IPR003593 AAA+ ATPase domain YPTB2171 IPR011527 ABC transporter type 1, transmembrane domain YPTB2171 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB2171 IPR039421 Type I protein exporter YPTB2172 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPTB2172 IPR024664 L-arabinose isomerase, C-terminal YPTB2172 IPR038583 L-arabinose isomerase, N-terminal domain superfamily YPTB2172 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily YPTB2172 IPR003762 L-arabinose isomerase YPTB2173 IPR005929 Ribulokinase YPTB2173 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB2174 IPR028082 Periplasmic binding protein-like I YPTB2174 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB2174 IPR026266 L-arabinose-binding periplasmic protein YPTB2175 IPR003593 AAA+ ATPase domain YPTB2175 IPR003439 ABC transporter-like YPTB2175 IPR017871 ABC transporter, conserved site YPTB2175 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2175 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG YPTB2176 IPR001851 ABC transporter, permease YPTB2177 IPR009057 Homeobox-like domain superfamily YPTB2177 IPR037923 Transcription regulator HTH-like YPTB2177 IPR018060 DNA binding HTH domain, AraC-type YPTB2177 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTB2177 IPR018062 HTH domain AraC-type, conserved site YPTB2177 IPR020449 Transcription regulator HTH, AraC- type YPTB2178 IPR036291 NAD(P)-binding domain superfamily YPTB2178 IPR004104 Oxidoreductase, C-terminal YPTB2178 IPR000683 Oxidoreductase, N-terminal YPTB2179 IPR038770 Sodium/solute symporter superfamily YPTB2179 IPR016833 Putative sodium bile acid cotransporter YPTB2180 IPR006650 Adenosine/AMP deaminase active site YPTB2180 IPR001365 Adenosine/AMP deaminase domain YPTB2180 IPR028893 Adenosine deaminase YPTB2180 IPR006330 Adenosine/adenine deaminase YPTB2180 IPR032466 Metal-dependent hydrolase YPTB2184 IPR010352 Protein of unknown function DUF945 YPTB2185 IPR011051 RmlC-like cupin domain superfamily YPTB2185 IPR016305 Mannose-6-phosphate isomerase YPTB2185 IPR014710 RmlC-like jelly roll fold YPTB2185 IPR018050 Phosphomannose isomerase, type I, conserved site YPTB2185 IPR001250 Mannose-6-phosphate isomerase, type I YPTB2186 IPR005677 Fumarate hydratase, class II YPTB2186 IPR024083 Fumarase/histidase, N-terminal YPTB2186 IPR020557 Fumarate lyase, conserved site YPTB2186 IPR018951 Fumarase C, C-terminal YPTB2186 IPR008948 L-Aspartase-like YPTB2186 IPR022761 Fumarate lyase, N-terminal YPTB2186 IPR000362 Fumarate lyase family YPTB2187 IPR008865 DNA replication terminus site-binding protein YPTB2187 IPR036384 Replication terminator Tus superfamily YPTB2187 IPR036381 Replication terminator Tus, domain 1 YPTB2188 IPR020846 Major facilitator superfamily domain YPTB2188 IPR005829 Sugar transporter, conserved site YPTB2188 IPR011701 Major facilitator superfamily YPTB2188 IPR036259 MFS transporter superfamily YPTB2189 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2189 IPR000847 Transcription regulator HTH, LysR YPTB2189 IPR005119 LysR, substrate-binding YPTB2189 IPR036390 Winged helix DNA-binding domain superfamily YPTB2190 IPR036390 Winged helix DNA-binding domain superfamily YPTB2190 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2190 IPR000600 ROK family YPTB2191 IPR004472 Dethiobiotin synthase BioD YPTB2191 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2192 IPR023790 Chloride channel, voltage-gated, ClcB YPTB2192 IPR001807 Chloride channel, voltage gated YPTB2192 IPR014743 Chloride channel, core YPTB2193 IPR010595 Protein of unknown function DUF1161 YPTB2194 IPR009700 Protein of unknown function DUF1283 YPTB2195 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB2195 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB2195 IPR036291 NAD(P)-binding domain superfamily YPTB2196 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB2196 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2196 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB2196 IPR003593 AAA+ ATPase domain YPTB2196 IPR003018 GAF domain YPTB2196 IPR029016 GAF-like domain superfamily YPTB2196 IPR009057 Homeobox-like domain superfamily YPTB2196 IPR002197 DNA binding HTH domain, Fis-type YPTB2196 IPR025944 Sigma-54 interaction domain, conserved site YPTB2196 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB2197 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB2197 IPR015590 Aldehyde dehydrogenase domain YPTB2197 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB2197 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB2197 IPR016161 Aldehyde/histidinol dehydrogenase YPTB2197 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB2199 IPR000620 EamA domain YPTB2200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2200 IPR004839 Aminotransferase, class I/classII YPTB2200 IPR027619 Putative C-S lyase YPTB2200 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2204 IPR025997 Periplasmic binding protein YPTB2204 IPR028082 Periplasmic binding protein-like I YPTB2205 IPR001851 ABC transporter, permease YPTB2206 IPR003439 ABC transporter-like YPTB2206 IPR017871 ABC transporter, conserved site YPTB2206 IPR015861 ABC transporter, ribose import, RbsA YPTB2206 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2206 IPR003593 AAA+ ATPase domain YPTB2208 IPR010067 Aliphatic sulfonates-binding protein YPTB2208 IPR015168 SsuA/THI5-like YPTB2208 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB2209 IPR035906 MetI-like superfamily YPTB2209 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2210 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2210 IPR003439 ABC transporter-like YPTB2210 IPR003593 AAA+ ATPase domain YPTB2211 IPR000845 Nucleoside phosphorylase domain YPTB2211 IPR011271 AMP nucleosidase YPTB2211 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily YPTB2211 IPR018953 AMP nucleoside phosphorylase, N-terminal YPTB2211 IPR035994 Nucleoside phosphorylase superfamily YPTB2216 IPR029061 Thiamin diphosphate-binding fold YPTB2216 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTB2216 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB2216 IPR000399 TPP-binding enzyme, conserved site YPTB2216 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB2216 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTB2216 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTB2216 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB2217 IPR002912 ACT domain YPTB2217 IPR039557 AHAS, ACT domain YPTB2217 IPR004789 Acetolactate synthase, small subunit YPTB2218 IPR041492 Haloacid dehalogenase-like hydrolase YPTB2218 IPR006439 HAD hydrolase, subfamily IA YPTB2218 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPTB2218 IPR023214 HAD superfamily YPTB2218 IPR036412 HAD-like superfamily YPTB2218 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB2220 IPR018299 Alkaline phosphatase, active site YPTB2220 IPR001952 Alkaline phosphatase YPTB2220 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB2221 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2221 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPTB2221 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTB2221 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPTB2221 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPTB2221 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPTB2221 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTB2222 IPR012318 Crp-type HTH domain YPTB2222 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPTB2222 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2222 IPR036390 Winged helix DNA-binding domain superfamily YPTB2222 IPR014710 RmlC-like jelly roll fold YPTB2222 IPR018490 Cyclic nucleotide-binding-like YPTB2222 IPR000595 Cyclic nucleotide-binding domain YPTB2223 IPR006016 UspA YPTB2224 IPR034300 NADP transhydrogenase beta-like domain YPTB2224 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB2224 IPR012136 NADP transhydrogenase, beta subunit YPTB2225 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPTB2225 IPR036291 NAD(P)-binding domain superfamily YPTB2225 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPTB2225 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPTB2225 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPTB2225 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPTB2225 IPR026255 NAD(P) transhydrogenase, alpha subunit YPTB2227 IPR025543 Dodecin-like YPTB2227 IPR010854 Domain of unknown function DUF1471 YPTB2227 IPR036275 YdgH-like superfamily YPTB2227 IPR025539 YdgH protein YPTB2228 IPR002293 Amino acid/polyamine transporter I YPTB2228 IPR004754 Amino acid antiporter YPTB2230 IPR039420 Transcriptional regulatory protein WalR-like YPTB2230 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2230 IPR001789 Signal transduction response regulator, receiver domain YPTB2230 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2230 IPR011006 CheY-like superfamily YPTB2230 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2231 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2231 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2231 IPR003660 HAMP domain YPTB2231 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2231 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2231 IPR005467 Histidine kinase domain YPTB2231 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2232 IPR001333 Peptidase M32, carboxypeptidase Taq YPTB2233 IPR025968 YwqJ-like deaminase YPTB2233 IPR022385 Rhs repeat-associated core YPTB2233 IPR041508 Toxin complex C-like repeat YPTB2234 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YPTB2234 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTB2234 IPR023480 Uncharacterised protein family UPF0312/YceI YPTB2235 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTB2235 IPR016174 Di-haem cytochrome, transmembrane YPTB2238 IPR008256 Peptidase S1B YPTB2238 IPR033116 Serine proteases, trypsin family, serine active site YPTB2238 IPR018114 Serine proteases, trypsin family, histidine active site YPTB2238 IPR001254 Serine proteases, trypsin domain YPTB2238 IPR009003 Peptidase S1, PA clan YPTB2241 IPR003593 AAA+ ATPase domain YPTB2241 IPR024590 RNA helicase HrpA, C-terminal YPTB2241 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB2241 IPR010222 RNA helicase HrpA YPTB2241 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2241 IPR011545 DEAD/DEAH box helicase domain YPTB2241 IPR001650 Helicase, C-terminal YPTB2241 IPR007502 Helicase-associated domain YPTB2241 IPR011709 Domain of unknown function DUF1605 YPTB2242 IPR003680 Flavodoxin-like fold YPTB2242 IPR029039 Flavoprotein-like superfamily YPTB2242 IPR023048 NADH-azoreductase, FMN-dependent YPTB2243 IPR037171 NagB/RpiA transferase-like YPTB2243 IPR007324 Sugar-binding domain, putative YPTB2243 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2243 IPR012318 Crp-type HTH domain YPTB2244 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB2244 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB2244 IPR013118 Mannitol dehydrogenase, C-terminal YPTB2244 IPR013131 Mannitol dehydrogenase, N-terminal YPTB2244 IPR000669 Mannitol dehydrogenase YPTB2244 IPR036291 NAD(P)-binding domain superfamily YPTB2245 IPR008309 Uncharacterised conserved protein UCP025560 YPTB2246 IPR025985 YnbE-like lipoprotein YPTB2247 IPR021730 Dicarboxylate transport YPTB2248 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB2248 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB2248 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB2248 IPR036291 NAD(P)-binding domain superfamily YPTB2248 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB2249 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPTB2249 IPR038670 HslJ-like superfamily YPTB2250 IPR005590 Protein of unknown function DUF333 YPTB2251 IPR003416 MgtC/SapB/SrpB/YhiD family YPTB2252 IPR000390 Small multidrug resistance protein family YPTB2253 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPTB2253 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTB2253 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPTB2253 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPTB2253 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPTB2253 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2253 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2253 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPTB2253 IPR011895 Pyruvate-flavodoxin oxidoreductase YPTB2253 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily YPTB2253 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB2253 IPR029061 Thiamin diphosphate-binding fold YPTB2254 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTB2254 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase YPTB2254 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type YPTB2254 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2255 IPR036514 SGNH hydrolase superfamily YPTB2255 IPR013830 SGNH hydrolase-type esterase domain YPTB2255 IPR013094 Alpha/beta hydrolase fold-3 YPTB2255 IPR029058 Alpha/Beta hydrolase fold YPTB2257 IPR023714 Zinc transport protein ZntB YPTB2257 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPTB2258 IPR030678 Peptide/nickel binding protein, MppA-type YPTB2258 IPR023765 Solute-binding protein family 5, conserved site YPTB2258 IPR000914 Solute-binding protein family 5 domain YPTB2258 IPR039424 Solute-binding protein family 5 YPTB2259 IPR000834 Peptidase M14, carboxypeptidase A YPTB2260 IPR029017 Enolase-like, N-terminal YPTB2260 IPR029065 Enolase C-terminal domain-like YPTB2260 IPR036849 Enolase-like, C-terminal domain superfamily YPTB2260 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB2260 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTB2260 IPR034603 Dipeptide epimerase YPTB2260 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPTB2261 IPR018219 Thiol peroxidase conserved site YPTB2261 IPR036249 Thioredoxin-like superfamily YPTB2261 IPR002065 Thiol peroxidase Tpx YPTB2261 IPR013766 Thioredoxin domain YPTB2261 IPR013740 Redoxin YPTB2262 IPR002912 ACT domain YPTB2262 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2262 IPR009057 Homeobox-like domain superfamily YPTB2262 IPR003593 AAA+ ATPase domain YPTB2262 IPR030828 TyrR family, helix-turn-helix domain YPTB2262 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB2262 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB2262 IPR000014 PAS domain YPTB2262 IPR035965 PAS domain superfamily YPTB2262 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB2262 IPR025944 Sigma-54 interaction domain, conserved site YPTB2265 IPR006507 Uncharacterised protein family UPF0283 YPTB2265 IPR021147 Protein of unknown function DUF697 YPTB2266 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPTB2268 IPR007168 Phage shock protein, PspC, N-terminal YPTB2268 IPR014320 Phage shock protein, PspC YPTB2269 IPR009554 Phage shock protein B YPTB2270 IPR007157 PspA/IM30 YPTB2270 IPR014319 Phage shock protein, PspA YPTB2271 IPR009057 Homeobox-like domain superfamily YPTB2271 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB2271 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2271 IPR003593 AAA+ ATPase domain YPTB2271 IPR002197 DNA binding HTH domain, Fis-type YPTB2271 IPR025944 Sigma-54 interaction domain, conserved site YPTB2271 IPR014317 Transcription activator PspF YPTB2271 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB2272 IPR023765 Solute-binding protein family 5, conserved site YPTB2272 IPR039424 Solute-binding protein family 5 YPTB2272 IPR030678 Peptide/nickel binding protein, MppA-type YPTB2272 IPR000914 Solute-binding protein family 5 domain YPTB2273 IPR035906 MetI-like superfamily YPTB2273 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2274 IPR035906 MetI-like superfamily YPTB2274 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2274 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB2275 IPR003439 ABC transporter-like YPTB2275 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB2275 IPR003593 AAA+ ATPase domain YPTB2275 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2276 IPR017871 ABC transporter, conserved site YPTB2276 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2276 IPR003439 ABC transporter-like YPTB2276 IPR003593 AAA+ ATPase domain YPTB2277 IPR029032 AhpD-like YPTB2278 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPTB2278 IPR005279 Dipeptide/tripeptide permease YPTB2278 IPR036259 MFS transporter superfamily YPTB2278 IPR000109 Proton-dependent oligopeptide transporter family YPTB2278 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPTB2279 IPR006977 Yip1 domain YPTB2280 IPR020317 Uncharacterised protein family YjbD YPTB2281 IPR010987 Glutathione S-transferase, C-terminal-like YPTB2281 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTB2281 IPR040079 Glutathione Transferase family YPTB2281 IPR036249 Thioredoxin-like superfamily YPTB2281 IPR004046 Glutathione S-transferase, C-terminal YPTB2281 IPR004045 Glutathione S-transferase, N-terminal YPTB2282 IPR004625 Pyridoxine kinase YPTB2282 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPTB2282 IPR029056 Ribokinase-like YPTB2282 IPR023685 Pyridoxal kinase PdxY YPTB2283 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPTB2283 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPTB2283 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB2283 IPR002307 Tyrosine-tRNA ligase YPTB2283 IPR036986 RNA-binding S4 domain superfamily YPTB2283 IPR002942 RNA-binding S4 domain YPTB2283 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPTB2283 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2284 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPTB2284 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative YPTB2284 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPTB2284 IPR012349 FMN-binding split barrel YPTB2284 IPR000659 Pyridoxamine 5'-phosphate oxidase YPTB2285 IPR036328 C-type lysozyme inhibitor superfamily YPTB2285 IPR018660 C-type lysozyme inhibitor YPTB2286 IPR005338 Anhydro-N-acetylmuramic acid kinase YPTB2287 IPR008816 Glycine zipper 2TM domain YPTB2288 IPR000835 MarR-type HTH domain YPTB2288 IPR023187 Transcriptional regulator MarR-type, conserved site YPTB2288 IPR023071 Transcriptional regulator, SlyA YPTB2288 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2288 IPR036390 Winged helix DNA-binding domain superfamily YPTB2289 IPR020471 Aldo/keto reductase YPTB2289 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB2289 IPR023210 NADP-dependent oxidoreductase domain YPTB2290 IPR010710 Protein of unknown function DUF1289 YPTB2291 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB2291 IPR012549 Phosphoethanolamine transferase, N-terminal YPTB2291 IPR040423 Phosphoethanolamine transferase YPTB2291 IPR000917 Sulfatase, N-terminal YPTB2292 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTB2292 IPR001647 DNA-binding HTH domain, TetR-type YPTB2292 IPR009057 Homeobox-like domain superfamily YPTB2292 IPR011075 Tetracyclin repressor-like, C-terminal domain YPTB2293 IPR013785 Aldolase-type TIM barrel YPTB2293 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTB2294 IPR022385 Rhs repeat-associated core YPTB2294 IPR025968 YwqJ-like deaminase YPTB2294 IPR041508 Toxin complex C-like repeat YPTB2295 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTB2295 IPR004361 Glyoxalase I YPTB2295 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB2295 IPR037523 Vicinal oxygen chelate (VOC) domain YPTB2295 IPR018146 Glyoxalase I, conserved site YPTB2296 IPR012337 Ribonuclease H-like superfamily YPTB2296 IPR036397 Ribonuclease H superfamily YPTB2296 IPR005987 Ribonuclease T YPTB2296 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB2297 IPR002109 Glutaredoxin YPTB2297 IPR014434 Monothiol glutaredoxin YPTB2297 IPR004480 Monothiol glutaredoxin-related YPTB2297 IPR036249 Thioredoxin-like superfamily YPTB2297 IPR033658 Glutaredoxin, PICOT-like YPTB2298 IPR038765 Papain-like cysteine peptidase superfamily YPTB2298 IPR000064 Endopeptidase, NLPC/P60 domain YPTB2299 IPR019833 Manganese/iron superoxide dismutase, binding site YPTB2299 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPTB2299 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPTB2299 IPR001189 Manganese/iron superoxide dismutase YPTB2299 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPTB2299 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPTB2300 IPR000843 LacI-type HTH domain YPTB2300 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2300 IPR028082 Periplasmic binding protein-like I YPTB2300 IPR023588 Transcription regulator HTH, PurR YPTB2301 IPR036390 Winged helix DNA-binding domain superfamily YPTB2301 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2301 IPR005119 LysR, substrate-binding YPTB2301 IPR000847 Transcription regulator HTH, LysR YPTB2302 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPTB2302 IPR011701 Major facilitator superfamily YPTB2302 IPR020846 Major facilitator superfamily domain YPTB2302 IPR036259 MFS transporter superfamily YPTB2303 IPR003333 Mycolic acid cyclopropane synthase YPTB2303 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2304 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPTB2304 IPR001783 Lumazine-binding protein YPTB2304 IPR017938 Riboflavin synthase-like beta-barrel YPTB2304 IPR026017 Lumazine-binding domain YPTB2305 IPR002528 Multi antimicrobial extrusion protein YPTB2305 IPR022913 Multidrug resistance protein MdtK YPTB2306 IPR015795 Pyruvate kinase, C-terminal YPTB2306 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPTB2306 IPR015793 Pyruvate kinase, barrel YPTB2306 IPR040442 Pyruvate kinase-like domain superfamily YPTB2306 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTB2306 IPR001697 Pyruvate kinase YPTB2306 IPR018209 Pyruvate kinase, active site YPTB2306 IPR015806 Pyruvate kinase, insert domain superfamily YPTB2306 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB2307 IPR016367 Murein-lipoprotein YPTB2307 IPR006817 Lipoprotein leucine-zipper YPTB2308 IPR038063 L,D-transpeptidase catalytic domain-like YPTB2308 IPR018392 LysM domain YPTB2308 IPR041597 L,D-transpeptidase C-terminal domain YPTB2308 IPR005490 L,D-transpeptidase catalytic domain YPTB2309 IPR023939 Cysteine desulfuration protein SufE YPTB2309 IPR003808 Fe-S metabolism associated domain, SufE-like YPTB2310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2310 IPR000192 Aminotransferase class V domain YPTB2310 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB2310 IPR010970 Cysteine desulfurase, SufS YPTB2310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2310 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2311 IPR000825 SUF system FeS cluster assembly, SufBD YPTB2311 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPTB2311 IPR011542 SUF system FeS cluster assembly, SufD YPTB2312 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPTB2312 IPR003593 AAA+ ATPase domain YPTB2312 IPR003439 ABC transporter-like YPTB2312 IPR017871 ABC transporter, conserved site YPTB2312 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2313 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPTB2313 IPR000825 SUF system FeS cluster assembly, SufBD YPTB2313 IPR010231 SUF system FeS cluster assembly, SufB YPTB2314 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB2314 IPR035903 HesB-like domain superfamily YPTB2314 IPR000361 FeS cluster biogenesis YPTB2314 IPR016092 FeS cluster insertion protein YPTB2314 IPR011298 FeS assembly scaffold SufA YPTB2315 IPR006683 Thioesterase domain YPTB2315 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI YPTB2315 IPR029069 HotDog domain superfamily YPTB2315 IPR003736 Phenylacetic acid degradation-related domain YPTB2316 IPR016166 FAD-binding domain, PCMH-type YPTB2316 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2316 IPR036318 FAD-binding, type PCMH-like superfamily YPTB2316 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2316 IPR016164 FAD-linked oxidase-like, C-terminal YPTB2316 IPR004113 FAD-linked oxidase, C-terminal YPTB2316 IPR009051 Alpha-helical ferredoxin YPTB2316 IPR006094 FAD linked oxidase, N-terminal YPTB2317 IPR002549 Transmembrane protein TqsA-like YPTB2318 IPR023151 PEP-utilising enzyme, conserved site YPTB2318 IPR040442 Pyruvate kinase-like domain superfamily YPTB2318 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB2318 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPTB2318 IPR000121 PEP-utilising enzyme, C-terminal YPTB2318 IPR018274 PEP-utilising enzyme, active site YPTB2318 IPR006319 Phosphoenolpyruvate synthase YPTB2318 IPR008279 PEP-utilising enzyme, mobile domain YPTB2318 IPR013815 ATP-grasp fold, subdomain 1 YPTB2318 IPR036637 Phosphohistidine domain superfamily YPTB2319 IPR005177 Bifunctional kinase-pyrophosphorylase YPTB2319 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily YPTB2319 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPTB2320 IPR013785 Aldolase-type TIM barrel YPTB2320 IPR006218 DAHP synthetase I/KDSA YPTB2320 IPR006219 DHAP synthase, class 1 YPTB2321 IPR003846 Protein adenylyltransferase SelO YPTB2322 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTB2322 IPR023741 Lipoate-protein ligase A YPTB2322 IPR004562 Lipoyltransferase/lipoate-protein ligase YPTB2322 IPR019491 Lipoate protein ligase, C-terminal YPTB2323 IPR000064 Endopeptidase, NLPC/P60 domain YPTB2323 IPR038765 Papain-like cysteine peptidase superfamily YPTB2324 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPTB2324 IPR000390 Small multidrug resistance protein family YPTB2325 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPTB2325 IPR000620 EamA domain YPTB2325 IPR000390 Small multidrug resistance protein family YPTB2326 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPTB2326 IPR003342 Glycosyl transferase family 39/83 YPTB2327 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB2327 IPR002509 NodB homology domain YPTB2327 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPTB2328 IPR002376 Formyl transferase, N-terminal YPTB2328 IPR036477 Formyl transferase, N-terminal domain superfamily YPTB2328 IPR001509 NAD-dependent epimerase/dehydratase YPTB2328 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPTB2328 IPR036291 NAD(P)-binding domain superfamily YPTB2328 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPTB2328 IPR005793 Formyl transferase, C-terminal YPTB2329 IPR029044 Nucleotide-diphospho-sugar transferases YPTB2329 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPTB2329 IPR001173 Glycosyltransferase 2-like YPTB2330 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPTB2330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2330 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2330 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTB2331 IPR003439 ABC transporter-like YPTB2331 IPR003593 AAA+ ATPase domain YPTB2331 IPR017871 ABC transporter, conserved site YPTB2331 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2331 IPR023693 ABC transporter, vitamin B12, BtuD YPTB2332 IPR033674 Thioredoxin/glutathione peroxidase BtuE YPTB2332 IPR000889 Glutathione peroxidase YPTB2332 IPR029759 Glutathione peroxidase active site YPTB2332 IPR029760 Glutathione peroxidase conserved site YPTB2332 IPR036249 Thioredoxin-like superfamily YPTB2333 IPR037294 ABC transporter, BtuC-like YPTB2333 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPTB2333 IPR000522 ABC transporter, permease protein, BtuC-like YPTB2335 IPR000119 Histone-like DNA-binding protein YPTB2335 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTB2335 IPR005684 Integration host factor, alpha subunit YPTB2335 IPR020816 Histone-like DNA-binding protein, conserved site YPTB2336 IPR002547 tRNA-binding domain YPTB2336 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain YPTB2336 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPTB2336 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPTB2336 IPR012340 Nucleic acid-binding, OB-fold YPTB2336 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily YPTB2336 IPR005121 Ferrodoxin-fold anticodon-binding domain YPTB2336 IPR009061 Putative DNA-binding domain superfamily YPTB2336 IPR005147 tRNA synthetase, B5-domain YPTB2336 IPR005146 B3/B4 tRNA-binding domain YPTB2336 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain YPTB2337 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPTB2337 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPTB2337 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPTB2337 IPR002319 Phenylalanyl-tRNA synthetase YPTB2337 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTB2337 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB2339 IPR035566 Ribosomal protein L20, C-terminal YPTB2339 IPR005813 Ribosomal protein L20 YPTB2340 IPR001706 Ribosomal protein L35, non-mitochondrial YPTB2340 IPR021137 Ribosomal protein L35 YPTB2340 IPR018265 Ribosomal protein L35, conserved site YPTB2340 IPR037229 Ribosomal protein L35 superfamily YPTB2341 IPR019815 Translation initiation factor 3, C-terminal YPTB2341 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily YPTB2341 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily YPTB2341 IPR019813 Translation initiation factor 3, conserved site YPTB2341 IPR019814 Translation initiation factor 3, N-terminal YPTB2341 IPR001288 Translation initiation factor 3 YPTB2342 IPR002320 Threonine-tRNA ligase, class IIa YPTB2342 IPR012676 TGS-like YPTB2342 IPR004095 TGS YPTB2342 IPR012675 Beta-grasp domain superfamily YPTB2342 IPR036621 Anticodon-binding domain superfamily YPTB2342 IPR004154 Anticodon-binding YPTB2342 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB2342 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPTB2342 IPR033728 Threonine-tRNA ligase catalytic core domain YPTB2342 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTB2342 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPTB2343 IPR025309 KTSC domain YPTB2345 IPR002771 Multiple antibiotic resistance (MarC)-related YPTB2346 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A YPTB2346 IPR023346 Lysozyme-like domain superfamily YPTB2346 IPR008258 Transglycosylase SLT domain 1 YPTB2346 IPR000189 Prokaryotic transglycosylase, active site YPTB2347 IPR006129 Adhesin B YPTB2347 IPR006128 Adhesion lipoprotein YPTB2347 IPR006127 Periplasmic solute binding protein, ZnuA-like YPTB2348 IPR017871 ABC transporter, conserved site YPTB2348 IPR003439 ABC transporter-like YPTB2348 IPR003593 AAA+ ATPase domain YPTB2348 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2349 IPR037294 ABC transporter, BtuC-like YPTB2349 IPR001626 ABC transporter, TroCD-like YPTB2350 IPR037294 ABC transporter, BtuC-like YPTB2350 IPR001626 ABC transporter, TroCD-like YPTB2353 IPR025229 YniB-like protein YPTB2354 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB2354 IPR036412 HAD-like superfamily YPTB2354 IPR041492 Haloacid dehalogenase-like hydrolase YPTB2354 IPR023214 HAD superfamily YPTB2354 IPR006439 HAD hydrolase, subfamily IA YPTB2355 IPR013096 Cupin 2, conserved barrel YPTB2355 IPR011051 RmlC-like cupin domain superfamily YPTB2355 IPR014710 RmlC-like jelly roll fold YPTB2355 IPR025499 Pectin degradation protein KdgF YPTB2356 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal YPTB2356 IPR011051 RmlC-like cupin domain superfamily YPTB2356 IPR014710 RmlC-like jelly roll fold YPTB2356 IPR021120 KduI/IolB isomerase YPTB2356 IPR007045 5-keto 4-deoxyuronate isomerase YPTB2357 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB2357 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB2357 IPR036291 NAD(P)-binding domain superfamily YPTB2357 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPTB2358 IPR010702 Periplasmic pectate lyase YPTB2359 IPR035906 MetI-like superfamily YPTB2359 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2360 IPR035906 MetI-like superfamily YPTB2360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2361 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2361 IPR040582 MalK, OB fold domain YPTB2361 IPR003593 AAA+ ATPase domain YPTB2361 IPR003439 ABC transporter-like YPTB2361 IPR017871 ABC transporter, conserved site YPTB2361 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2361 IPR005116 Transport-associated OB, type 1 YPTB2362 IPR006059 Bacterial extracellular solute-binding protein YPTB2363 IPR009331 Oligogalacturonate-specific porin YPTB2364 IPR016956 Inner membrane protein YdjM YPTB2364 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTB2366 IPR036366 PGBD superfamily YPTB2366 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTB2366 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTB2366 IPR036365 PGBD-like superfamily YPTB2367 IPR014757 Transcription regulator IclR, C-terminal YPTB2367 IPR005471 Transcription regulator IclR, N-terminal YPTB2367 IPR011991 ArsR-like helix-turn-helix domain YPTB2367 IPR029016 GAF-like domain superfamily YPTB2367 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2367 IPR036390 Winged helix DNA-binding domain superfamily YPTB2368 IPR027946 Oligogalacturonate lyase domain YPTB2368 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTB2369 IPR011701 Major facilitator superfamily YPTB2369 IPR020846 Major facilitator superfamily domain YPTB2369 IPR036259 MFS transporter superfamily YPTB2370 IPR008962 PapD-like superfamily YPTB2370 IPR001829 Pili assembly chaperone, bacterial YPTB2370 IPR013783 Immunoglobulin-like fold YPTB2370 IPR016148 Pili assembly chaperone, C-terminal YPTB2370 IPR018046 Pili assembly chaperone, conserved site YPTB2370 IPR016147 Pili assembly chaperone, N-terminal YPTB2370 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB2372 IPR018030 Fimbrial membrane usher, conserved site YPTB2372 IPR000015 Outer membrane usher protein YPTB2372 IPR037224 PapC, N-terminal domain superfamily YPTB2372 IPR025885 PapC, N-terminal domain YPTB2372 IPR025949 PapC-like, C-terminal domain YPTB2372 IPR042186 Outer membrane usher protein FimD, plug domain YPTB2373 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB2373 IPR001829 Pili assembly chaperone, bacterial YPTB2373 IPR016148 Pili assembly chaperone, C-terminal YPTB2373 IPR018046 Pili assembly chaperone, conserved site YPTB2373 IPR013783 Immunoglobulin-like fold YPTB2373 IPR008962 PapD-like superfamily YPTB2373 IPR016147 Pili assembly chaperone, N-terminal YPTB2374 IPR000259 Fimbrial-type adhesion domain YPTB2374 IPR036937 Fimbrial-type adhesion domain superfamily YPTB2374 IPR008966 Adhesion domain superfamily YPTB2375 IPR001915 Peptidase M48 YPTB2375 IPR022919 Peptidase M48, protease HtpX, putative YPTB2376 IPR029045 ClpP/crotonase-like domain superfamily YPTB2376 IPR036034 PDZ superfamily YPTB2376 IPR004447 C-terminal-processing peptidase S41A YPTB2376 IPR040573 Tail specific protease, N-terminal domain YPTB2376 IPR020992 Tail specific protease, C-terminal YPTB2376 IPR005151 Tail specific protease YPTB2376 IPR001478 PDZ domain YPTB2377 IPR016103 ProQ/FinO domain YPTB2377 IPR023529 RNA chaperone ProQ YPTB2377 IPR035236 RNA chaperone ProQ, C-terminal YPTB2377 IPR036442 ProQ/FinO domain superfamily YPTB2378 IPR029016 GAF-like domain superfamily YPTB2378 IPR003018 GAF domain YPTB2378 IPR000614 Free Met sulfoxide reductase conserved site YPTB2379 IPR011031 Multihaem cytochrome YPTB2379 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPTB2379 IPR007498 Intermembrane transport protein PqiA-like YPTB2380 IPR003399 Mce/MlaD YPTB2387 IPR009950 Protein of unknown function DUF1480 YPTB2392 IPR029066 PLP-binding barrel YPTB2392 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPTB2392 IPR000821 Alanine racemase YPTB2392 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTB2392 IPR001608 Alanine racemase, N-terminal YPTB2392 IPR011079 Alanine racemase, C-terminal YPTB2394 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB2394 IPR024973 ESPR domain YPTB2394 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB2394 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTB2394 IPR008640 Head domain of trimeric autotransporter adhesin YPTB2394 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTB2394 IPR024973 ESPR domain YPTB2394 IPR008640 Head domain of trimeric autotransporter adhesin YPTB2394 IPR005594 YadA-like, C-terminal YPTB2394 IPR005594 YadA-like, C-terminal YPTB2395 IPR036366 PGBD superfamily YPTB2395 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTB2395 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTB2395 IPR036365 PGBD-like superfamily YPTB2396 IPR007439 Chemotaxis phosphatase, CheZ YPTB2397 IPR011006 CheY-like superfamily YPTB2397 IPR001789 Signal transduction response regulator, receiver domain YPTB2398 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPTB2398 IPR001789 Signal transduction response regulator, receiver domain YPTB2398 IPR011006 CheY-like superfamily YPTB2398 IPR035909 Methylesterase CheB, C-terminal YPTB2398 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type YPTB2399 IPR026024 Chemotaxis protein methyltransferase CheR YPTB2399 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily YPTB2399 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2399 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPTB2399 IPR000780 MCP methyltransferase, CheR-type YPTB2399 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPTB2400 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTB2400 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB2400 IPR003660 HAMP domain YPTB2400 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB2400 IPR004090 Chemotaxis methyl-accepting receptor YPTB2400 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTB2401 IPR004090 Chemotaxis methyl-accepting receptor YPTB2401 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTB2401 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTB2401 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB2401 IPR003660 HAMP domain YPTB2401 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB2404 IPR036061 CheW-like domain superfamily YPTB2404 IPR002545 CheW-like domain YPTB2404 IPR039315 Chemotaxis protein CheW YPTB2405 IPR005467 Histidine kinase domain YPTB2405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2405 IPR036061 CheW-like domain superfamily YPTB2405 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2405 IPR035891 CheY-binding domain of CheA YPTB2405 IPR015162 CheY binding YPTB2405 IPR002545 CheW-like domain YPTB2405 IPR036641 HPT domain superfamily YPTB2405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2405 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB2405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2405 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily YPTB2405 IPR004105 Histidine kinase CheA-like, homodimeric domain YPTB2406 IPR036737 OmpA-like domain superfamily YPTB2406 IPR006665 OmpA-like domain YPTB2406 IPR025713 Motility protein B, N-terminal domain YPTB2407 IPR000540 Flagellar motor protein MotA, conserved site YPTB2407 IPR022522 Flagellar motor stator, MotA YPTB2407 IPR002898 MotA/TolQ/ExbB proton channel YPTB2409 IPR036194 Flagellar transcriptional activator FlhD superfamily YPTB2409 IPR023559 Flagellar transcriptional activator FlhD YPTB2410 IPR023299 P-type ATPase, cytoplasmic domain N YPTB2410 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB2410 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTB2410 IPR018303 P-type ATPase, phosphorylation site YPTB2410 IPR006415 P-type ATPase, subfamily IIIB YPTB2410 IPR023214 HAD superfamily YPTB2410 IPR036412 HAD-like superfamily YPTB2410 IPR008250 P-type ATPase, A domain superfamily YPTB2410 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTB2410 IPR001757 P-type ATPase YPTB2411 IPR003416 MgtC/SapB/SrpB/YhiD family YPTB2412 IPR003660 HAMP domain YPTB2412 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB2412 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTB2412 IPR004090 Chemotaxis methyl-accepting receptor YPTB2412 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB2412 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTB2413 IPR019717 Dextransucrase DSRB YPTB2414 IPR019844 Cold-shock (CSD) domain YPTB2414 IPR012156 Cold shock, CspA YPTB2414 IPR011129 Cold shock domain YPTB2414 IPR012340 Nucleic acid-binding, OB-fold YPTB2414 IPR002059 Cold-shock protein, DNA-binding YPTB2415 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YPTB2415 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPTB2415 IPR023230 Glycoside hydrolase, family 2, conserved site YPTB2415 IPR006103 Glycoside hydrolase family 2, catalytic domain YPTB2415 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPTB2415 IPR011013 Galactose mutarotase-like domain superfamily YPTB2415 IPR023232 Glycoside hydrolase, family 2, active site YPTB2415 IPR006101 Glycoside hydrolase, family 2 YPTB2415 IPR013783 Immunoglobulin-like fold YPTB2415 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTB2415 IPR008979 Galactose-binding-like domain superfamily YPTB2415 IPR032312 Beta-galactosidase, domain 4 YPTB2415 IPR004199 Beta galactosidase small chain/ domain 5 YPTB2415 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPTB2415 IPR017853 Glycoside hydrolase superfamily YPTB2416 IPR036736 ACP-like superfamily YPTB2416 IPR014043 Acyl transferase YPTB2416 IPR032821 Ketoacyl-synthetase, C-terminal extension YPTB2416 IPR020843 Polyketide synthase, enoylreductase domain YPTB2416 IPR020807 Polyketide synthase, dehydratase domain YPTB2416 IPR036291 NAD(P)-binding domain superfamily YPTB2416 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB2416 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTB2416 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB2416 IPR018201 Beta-ketoacyl synthase, active site YPTB2416 IPR011032 GroES-like superfamily YPTB2416 IPR013154 Alcohol dehydrogenase, N-terminal YPTB2416 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB2416 IPR016039 Thiolase-like YPTB2416 IPR009081 Phosphopantetheine binding ACP domain YPTB2416 IPR013149 Alcohol dehydrogenase, C-terminal YPTB2416 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTB2416 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTB2416 IPR013968 Polyketide synthase, ketoreductase domain YPTB2416 IPR042104 Polyketide synthase, dehydratase domain superfamily YPTB2417 IPR019713 Inner membrane protein YlaC YPTB2418 IPR000485 AsnC-type HTH domain YPTB2418 IPR011991 ArsR-like helix-turn-helix domain YPTB2418 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTB2418 IPR011008 Dimeric alpha-beta barrel YPTB2418 IPR019888 Transcription regulator AsnC-type YPTB2418 IPR036390 Winged helix DNA-binding domain superfamily YPTB2418 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2418 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTB2420 IPR017704 Putative selenium-binding protein YdfZ YPTB2421 IPR033379 Histidine acid phosphatase active site YPTB2421 IPR029033 Histidine phosphatase superfamily YPTB2421 IPR000560 Histidine phosphatase superfamily, clade-2 YPTB2422 IPR002577 Helix-turn-helix, HxlR type YPTB2422 IPR036390 Winged helix DNA-binding domain superfamily YPTB2422 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2423 IPR036291 NAD(P)-binding domain superfamily YPTB2423 IPR008030 NmrA-like domain YPTB2424 IPR035965 PAS domain superfamily YPTB2424 IPR013655 PAS fold-3 YPTB2424 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB2424 IPR003660 HAMP domain YPTB2424 IPR004090 Chemotaxis methyl-accepting receptor YPTB2424 IPR000014 PAS domain YPTB2424 IPR001610 PAC motif YPTB2426 IPR028082 Periplasmic binding protein-like I YPTB2426 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2426 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB2426 IPR000843 LacI-type HTH domain YPTB2427 IPR024084 Isopropylmalate dehydrogenase-like domain YPTB2427 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPTB2427 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTB2428 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTB2428 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTB2428 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB2428 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB2428 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTB2429 IPR033713 Phosphatase NudJ YPTB2429 IPR015797 NUDIX hydrolase-like domain superfamily YPTB2429 IPR020476 NUDIX hydrolase YPTB2429 IPR020084 NUDIX hydrolase, conserved site YPTB2429 IPR000086 NUDIX hydrolase domain YPTB2430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2430 IPR004506 tRNA-specific 2-thiouridylase YPTB2430 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPTB2431 IPR035932 HflD-like superfamily YPTB2431 IPR007451 High frequency lysogenization protein HflD YPTB2432 IPR004769 Adenylosuccinate lyase YPTB2432 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPTB2432 IPR008948 L-Aspartase-like YPTB2432 IPR022761 Fumarate lyase, N-terminal YPTB2432 IPR020557 Fumarate lyase, conserved site YPTB2432 IPR024083 Fumarase/histidase, N-terminal YPTB2432 IPR000362 Fumarate lyase family YPTB2434 IPR001789 Signal transduction response regulator, receiver domain YPTB2434 IPR011006 CheY-like superfamily YPTB2434 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2434 IPR039420 Transcriptional regulatory protein WalR-like YPTB2434 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2435 IPR015014 PhoQ Sensor YPTB2435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2435 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2435 IPR038429 PhoQ Sensor superfamily YPTB2435 IPR005467 Histidine kinase domain YPTB2435 IPR003660 HAMP domain YPTB2436 IPR003347 JmjC domain YPTB2436 IPR039994 JmjC domain-containing YPTB2437 IPR036264 Bacterial exopeptidase dimerisation domain YPTB2437 IPR002933 Peptidase M20 YPTB2437 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTB2437 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPTB2437 IPR011650 Peptidase M20, dimerisation domain YPTB2438 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTB2438 IPR026591 Sirtuin, catalytic core small domain superfamily YPTB2438 IPR027546 Sirtuin, class III YPTB2438 IPR003000 Sirtuin family YPTB2438 IPR026590 Sirtuin family, catalytic core domain YPTB2439 IPR023505 N-acetyl-D-glucosamine kinase YPTB2439 IPR000600 ROK family YPTB2440 IPR003838 ABC transporter permease protein domain YPTB2440 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type YPTB2440 IPR025857 MacB-like periplasmic core domain YPTB2440 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPTB2441 IPR003439 ABC transporter-like YPTB2441 IPR011924 Lipoprotein releasing system, ATP-binding protein YPTB2441 IPR017871 ABC transporter, conserved site YPTB2441 IPR003593 AAA+ ATPase domain YPTB2441 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2441 IPR015854 ABC transporter, lipoprotein release, LolD YPTB2442 IPR003838 ABC transporter permease protein domain YPTB2442 IPR025857 MacB-like periplasmic core domain YPTB2442 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPTB2443 IPR037235 TRCF-like, C-terminal domain YPTB2443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2443 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPTB2443 IPR004576 Transcription-repair coupling factor YPTB2443 IPR001650 Helicase, C-terminal YPTB2443 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB2443 IPR041471 UvrB, interaction domain YPTB2443 IPR036101 CarD-like/TRCF domain superfamily YPTB2443 IPR003711 CarD-like/TRCF domain YPTB2443 IPR011545 DEAD/DEAH box helicase domain YPTB2444 IPR008816 Glycine zipper 2TM domain YPTB2447 IPR023753 FAD/NAD(P)-binding domain YPTB2447 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2448 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTB2448 IPR029058 Alpha/Beta hydrolase fold YPTB2448 IPR022987 Uncharacterised protein family UPF0227 YPTB2449 IPR001764 Glycoside hydrolase, family 3, N-terminal YPTB2449 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPTB2449 IPR017853 Glycoside hydrolase superfamily YPTB2449 IPR022956 Beta-hexosaminidase, bacterial YPTB2449 IPR019800 Glycoside hydrolase, family 3, active site YPTB2450 IPR011009 Protein kinase-like domain superfamily YPTB2450 IPR002575 Aminoglycoside phosphotransferase YPTB2450 IPR014093 Thiamine kinase YPTB2451 IPR014094 Penicillin-binding protein activator LpoB YPTB2451 IPR012640 Membrane lipoprotein, lipid attachment site YPTB2452 IPR038483 YcfL-like superfamily YPTB2452 IPR010824 Protein of unknown function DUF1425 YPTB2453 IPR036265 HIT-like superfamily YPTB2453 IPR011146 HIT-like domain YPTB2453 IPR001310 Histidine triad (HIT) protein YPTB2453 IPR019808 Histidine triad, conserved site YPTB2454 IPR036291 NAD(P)-binding domain superfamily YPTB2454 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPTB2460 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB2460 IPR006430 Phage portal protein PBSX family YPTB2463 IPR036878 Glucose permease domain IIB YPTB2463 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTB2463 IPR003352 Phosphotransferase system, EIIC YPTB2463 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTB2463 IPR001996 Phosphotransferase system, IIB component, type 1 YPTB2463 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPTB2463 IPR011299 PTS system glucose-specific IIBC component YPTB2464 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTB2464 IPR015991 Uncharacterised hydrolase TatD-type YPTB2464 IPR032466 Metal-dependent hydrolase YPTB2464 IPR001130 TatD family YPTB2465 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTB2465 IPR004622 DNA polymerase III, delta prime subunit YPTB2465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2465 IPR015199 DNA polymerase III, delta subunit, C-terminal YPTB2466 IPR039430 Thymidylate kinase-like domain YPTB2466 IPR018095 Thymidylate kinase, conserved site YPTB2466 IPR018094 Thymidylate kinase YPTB2466 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2467 IPR003770 Endolytic murein transglycosylase YPTB2468 IPR017824 Aminodeoxychorismate lyase, class IV YPTB2468 IPR001544 Aminotransferase class IV YPTB2468 IPR018300 Aminotransferase, class IV, conserved site YPTB2468 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPTB2469 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB2469 IPR016039 Thiolase-like YPTB2469 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB2469 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB2469 IPR018201 Beta-ketoacyl synthase, active site YPTB2469 IPR000794 Beta-ketoacyl synthase YPTB2469 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPTB2470 IPR009081 Phosphopantetheine binding ACP domain YPTB2470 IPR006162 Phosphopantetheine attachment site YPTB2470 IPR003231 Acyl carrier protein (ACP) YPTB2470 IPR036736 ACP-like superfamily YPTB2471 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB2471 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB2471 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTB2471 IPR036291 NAD(P)-binding domain superfamily YPTB2472 IPR001227 Acyl transferase domain superfamily YPTB2472 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPTB2472 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPTB2472 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTB2472 IPR014043 Acyl transferase YPTB2472 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTB2473 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPTB2473 IPR016039 Thiolase-like YPTB2473 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPTB2473 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPTB2474 IPR003664 Fatty acid synthesis PlsX protein YPTB2474 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPTB2475 IPR011332 Zinc-binding ribosomal protein YPTB2475 IPR002677 Ribosomal protein L32p YPTB2476 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YPTB2476 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria YPTB2477 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB2477 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPTB2478 IPR036986 RNA-binding S4 domain superfamily YPTB2478 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTB2478 IPR002942 RNA-binding S4 domain YPTB2478 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB2478 IPR006225 Pseudouridine synthase, RluC/RluD YPTB2478 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB2479 IPR028878 Ribonuclease E YPTB2479 IPR021968 Polyribonucleotide phosphorylase C-terminal YPTB2479 IPR004659 Ribonuclease E/G YPTB2479 IPR022967 RNA-binding domain, S1 YPTB2479 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPTB2479 IPR003029 S1 domain YPTB2479 IPR012340 Nucleic acid-binding, OB-fold YPTB2481 IPR011008 Dimeric alpha-beta barrel YPTB2481 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTB2482 IPR032466 Metal-dependent hydrolase YPTB2482 IPR002195 Dihydroorotase, conserved site YPTB2482 IPR004721 Dihydroorotase homodimeric type YPTB2482 IPR006680 Amidohydrolase-related YPTB2483 IPR036687 DinI-like superfamily YPTB2483 IPR010391 DNA damage-inducible protein DinI-like YPTB2484 IPR025730 Biofilm regulator BssS YPTB2485 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2485 IPR006076 FAD dependent oxidoreductase YPTB2485 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPTB2486 IPR001789 Signal transduction response regulator, receiver domain YPTB2486 IPR000792 Transcription regulator LuxR, C-terminal YPTB2486 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2487 IPR002549 Transmembrane protein TqsA-like YPTB2490 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPTB2490 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTB2491 IPR005279 Dipeptide/tripeptide permease YPTB2491 IPR020846 Major facilitator superfamily domain YPTB2491 IPR036259 MFS transporter superfamily YPTB2491 IPR000109 Proton-dependent oligopeptide transporter family YPTB2491 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPTB2492 IPR010780 Protein of unknown function DUF1375 YPTB2493 IPR029044 Nucleotide-diphospho-sugar transferases YPTB2493 IPR001173 Glycosyltransferase 2-like YPTB2493 IPR023725 Glucan biosynthesis glucosyltransferase H YPTB2494 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTB2494 IPR014756 Immunoglobulin E-set YPTB2494 IPR013783 Immunoglobulin-like fold YPTB2494 IPR014438 Glucan biosynthesis protein MdoG/MdoD YPTB2494 IPR011013 Galactose mutarotase-like domain superfamily YPTB2494 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal YPTB2494 IPR023704 Glucan biosynthesis protein G YPTB2497 IPR005170 Transporter-associated domain YPTB2497 IPR036318 FAD-binding, type PCMH-like superfamily YPTB2497 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTB2497 IPR030151 K(+)/H(+) antiporter NhaP YPTB2497 IPR023729 K(+)/H(+) antiporter NhaP2 YPTB2497 IPR006037 Regulator of K+ conductance, C-terminal YPTB2497 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTB2497 IPR006153 Cation/H+ exchanger YPTB2497 IPR038770 Sodium/solute symporter superfamily YPTB2499 IPR018311 Autoinducer synthesis, conserved site YPTB2499 IPR001690 Autoinducer synthase YPTB2499 IPR016181 Acyl-CoA N-acyltransferase YPTB2500 IPR000792 Transcription regulator LuxR, C-terminal YPTB2500 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2500 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPTB2500 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB2500 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2501 IPR005119 LysR, substrate-binding YPTB2501 IPR000847 Transcription regulator HTH, LysR YPTB2501 IPR036390 Winged helix DNA-binding domain superfamily YPTB2501 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2502 IPR020846 Major facilitator superfamily domain YPTB2502 IPR005828 Major facilitator, sugar transporter-like YPTB2502 IPR036259 MFS transporter superfamily YPTB2502 IPR005829 Sugar transporter, conserved site YPTB2504 IPR020471 Aldo/keto reductase YPTB2504 IPR023210 NADP-dependent oxidoreductase domain YPTB2504 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB2505 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST YPTB2506 IPR013399 CRISPR-associated protein Csy3 YPTB2507 IPR013398 CRISPR-associated protein Csy2 YPTB2508 IPR013397 CRISPR-associated protein Csy1 YPTB2509 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPTB2509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2509 IPR038257 CRISPR-associated Cas3-type HD domain superfamily YPTB2509 IPR006483 CRISPR-associated Cas3-type HD domain YPTB2510 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPTB2510 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain YPTB2510 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain YPTB2510 IPR002729 CRISPR-associated protein Cas1 YPTB2511 IPR010920 LSM domain superfamily YPTB2511 IPR030192 Miniconductance mechanosensitive channel YbdG YPTB2511 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTB2511 IPR006685 Mechanosensitive ion channel MscS YPTB2515 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YPTB2515 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase YPTB2515 IPR007184 Mannoside phosphorylase YPTB2516 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2516 IPR035906 MetI-like superfamily YPTB2517 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2517 IPR035906 MetI-like superfamily YPTB2519 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2519 IPR000843 LacI-type HTH domain YPTB2519 IPR028082 Periplasmic binding protein-like I YPTB2520 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTB2520 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTB2520 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTB2520 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTB2520 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTB2520 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTB2520 IPR005841 Alpha-D-phosphohexomutase superfamily YPTB2520 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTB2521 IPR003593 AAA+ ATPase domain YPTB2521 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2521 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTB2521 IPR003439 ABC transporter-like YPTB2521 IPR040582 MalK, OB fold domain YPTB2521 IPR017871 ABC transporter, conserved site YPTB2521 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2527 IPR025157 Hemagglutinin repeat YPTB2527 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB2527 IPR012334 Pectin lyase fold YPTB2527 IPR008638 Filamentous haemagglutinin, N-terminal YPTB2527 IPR011050 Pectin lyase fold/virulence factor YPTB2527 IPR024973 ESPR domain YPTB2527 IPR006914 VENN motif-containing domain YPTB2528 IPR035251 ShlB, POTRA domain YPTB2528 IPR034746 POTRA domain YPTB2528 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB2528 IPR005565 Haemolysin activator HlyB, C-terminal YPTB2528 IPR027282 Two partner secretion pathway transporter YPTB2529 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB2529 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB2529 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB2529 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTB2529 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB2529 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB2529 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB2529 IPR000951 Phthalate dioxygenase reductase YPTB2529 IPR039003 Carnitine monooxygenase reductase subunit YPTB2529 IPR012675 Beta-grasp domain superfamily YPTB2529 IPR017938 Riboflavin synthase-like beta-barrel YPTB2530 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPTB2530 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPTB2530 IPR039004 Carnitine monooxygenase oxygenase subunit YPTB2530 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPTB2530 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPTB2530 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPTB2531 IPR000060 BCCT transporter family YPTB2531 IPR018093 BCCT transporter, conserved site YPTB2532 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTB2532 IPR011829 Tartrate dehydrogenase YPTB2532 IPR024084 Isopropylmalate dehydrogenase-like domain YPTB2533 IPR005119 LysR, substrate-binding YPTB2533 IPR000847 Transcription regulator HTH, LysR YPTB2533 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2533 IPR036390 Winged helix DNA-binding domain superfamily YPTB2534 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2534 IPR028082 Periplasmic binding protein-like I YPTB2534 IPR000843 LacI-type HTH domain YPTB2535 IPR001851 ABC transporter, permease YPTB2536 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2536 IPR015861 ABC transporter, ribose import, RbsA YPTB2536 IPR017871 ABC transporter, conserved site YPTB2536 IPR003439 ABC transporter-like YPTB2536 IPR003593 AAA+ ATPase domain YPTB2537 IPR028082 Periplasmic binding protein-like I YPTB2537 IPR025997 Periplasmic binding protein YPTB2538 IPR013154 Alcohol dehydrogenase, N-terminal YPTB2538 IPR013149 Alcohol dehydrogenase, C-terminal YPTB2538 IPR020843 Polyketide synthase, enoylreductase domain YPTB2538 IPR036291 NAD(P)-binding domain superfamily YPTB2538 IPR011032 GroES-like superfamily YPTB2542 IPR027385 Outer membrane protein beta-barrel domain YPTB2542 IPR000758 Virulence-related outer membrane protein YPTB2542 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB2543 IPR000620 EamA domain YPTB2545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2545 IPR041698 Methyltransferase domain 25 YPTB2545 IPR023506 Trans-aconitate 2-methyltransferase YPTB2545 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPTB2546 IPR002177 DNA-binding protein Dps YPTB2546 IPR009078 Ferritin-like superfamily YPTB2546 IPR012347 Ferritin-like YPTB2546 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPTB2546 IPR008331 Ferritin/DPS protein domain YPTB2546 IPR023188 DNA-binding protein Dps, conserved site YPTB2548 IPR001320 Ionotropic glutamate receptor YPTB2548 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB2548 IPR018313 Solute-binding protein family 3, conserved site YPTB2549 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2549 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB2549 IPR035906 MetI-like superfamily YPTB2550 IPR003593 AAA+ ATPase domain YPTB2550 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2550 IPR017871 ABC transporter, conserved site YPTB2550 IPR003439 ABC transporter-like YPTB2550 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTB2551 IPR035965 PAS domain superfamily YPTB2551 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB2551 IPR001610 PAC motif YPTB2551 IPR000014 PAS domain YPTB2551 IPR000700 PAS-associated, C-terminal YPTB2551 IPR013655 PAS fold-3 YPTB2551 IPR004090 Chemotaxis methyl-accepting receptor YPTB2553 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2553 IPR016909 Ribosomal RNA large subunit methyltransferase F YPTB2553 IPR010286 METTL16/RlmF family YPTB2554 IPR025543 Dodecin-like YPTB2554 IPR010854 Domain of unknown function DUF1471 YPTB2554 IPR036275 YdgH-like superfamily YPTB2555 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTB2555 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTB2555 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTB2556 IPR010192 2-succinylbenzoate--CoA ligase YPTB2556 IPR020845 AMP-binding, conserved site YPTB2556 IPR025110 AMP-binding enzyme, C-terminal domain YPTB2556 IPR042099 AMP-dependent synthetase-like superfamily YPTB2556 IPR000873 AMP-dependent synthetase/ligase YPTB2557 IPR029065 Enolase C-terminal domain-like YPTB2557 IPR010196 o-Succinylbenzoate synthase, MenC type1 YPTB2557 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTB2557 IPR036849 Enolase-like, C-terminal domain superfamily YPTB2557 IPR029017 Enolase-like, N-terminal YPTB2558 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB YPTB2558 IPR029045 ClpP/crotonase-like domain superfamily YPTB2558 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTB2558 IPR001753 Enoyl-CoA hydratase/isomerase YPTB2558 IPR014748 Enoyl-CoA hydratase, C-terminal YPTB2559 IPR000073 Alpha/beta hydrolase fold-1 YPTB2559 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPTB2559 IPR029058 Alpha/Beta hydrolase fold YPTB2560 IPR029061 Thiamin diphosphate-binding fold YPTB2560 IPR032264 Menaquinone biosynthesis protein MenD, middle domain YPTB2560 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTB2560 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase YPTB2560 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTB2561 IPR004561 Isochorismate synthase YPTB2561 IPR015890 Chorismate-utilising enzyme, C-terminal YPTB2561 IPR005801 ADC synthase YPTB2561 IPR034681 Isochorismate synthase MenF YPTB2563 IPR010279 Inner membrane protein YqjD/ElaB YPTB2565 IPR004786 6-phosphogluconate dehydratase YPTB2565 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPTB2565 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPTB2565 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPTB2565 IPR037237 IlvD/EDD, N-terminal domain YPTB2566 IPR005624 Haem-degrading YPTB2566 IPR038084 GlcG-like domain superfamily YPTB2566 IPR010371 Uncharacterised protein family UPF0303 YPTB2567 IPR011701 Major facilitator superfamily YPTB2567 IPR020846 Major facilitator superfamily domain YPTB2567 IPR036259 MFS transporter superfamily YPTB2568 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB2568 IPR036291 NAD(P)-binding domain superfamily YPTB2568 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB2569 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2569 IPR000843 LacI-type HTH domain YPTB2569 IPR028082 Periplasmic binding protein-like I YPTB2571 IPR036291 NAD(P)-binding domain superfamily YPTB2571 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB2571 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB2572 IPR031322 Shikimate kinase/gluconokinase YPTB2572 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPTB2572 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2573 IPR037012 YhcH/YjgK/YiaL superfamily YPTB2573 IPR004375 YhcH/YjgK/YiaL family YPTB2575 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTB2575 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPTB2576 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTB2576 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPTB2576 IPR003918 NADH:ubiquinone oxidoreductase YPTB2577 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPTB2577 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTB2577 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPTB2577 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPTB2578 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YPTB2578 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPTB2579 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ YPTB2579 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPTB2580 IPR010226 NADH-quinone oxidoreductase, chain I YPTB2580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2581 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPTB2581 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPTB2582 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPTB2582 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPTB2582 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTB2582 IPR006656 Molybdopterin oxidoreductase YPTB2582 IPR006657 Molybdopterin dinucleotide-binding domain YPTB2582 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB2582 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPTB2582 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB2582 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB2583 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain YPTB2583 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPTB2583 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPTB2583 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPTB2583 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPTB2583 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily YPTB2583 IPR019554 Soluble ligand binding domain YPTB2584 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal YPTB2584 IPR036249 Thioredoxin-like superfamily YPTB2584 IPR042128 NuoE domain YPTB2584 IPR002023 NADH-quinone oxidoreductase subunit E-like YPTB2585 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily YPTB2585 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPTB2585 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPTB2585 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPTB2585 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily YPTB2585 IPR001135 NADH-quinone oxidoreductase, subunit D YPTB2585 IPR023062 NADH dehydrogenase, subunit CD YPTB2585 IPR010218 NADH dehydrogenase, subunit C YPTB2585 IPR029014 [NiFe]-hydrogenase, large subunit YPTB2586 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPTB2586 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPTB2587 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPTB2587 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPTB2587 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily YPTB2588 IPR036390 Winged helix DNA-binding domain superfamily YPTB2588 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2588 IPR005119 LysR, substrate-binding YPTB2588 IPR000847 Transcription regulator HTH, LysR YPTB2589 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2589 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2589 IPR004839 Aminotransferase, class I/classII YPTB2589 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2590 IPR022971 5'-deoxynucleotidase YfbR YPTB2590 IPR003607 HD/PDEase domain YPTB2590 IPR039356 Metal-dependent nucleoside 5'-monophosphatase YPTB2592 IPR006037 Regulator of K+ conductance, C-terminal YPTB2592 IPR031312 Sodium/sulphate symporter, conserved site YPTB2592 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTB2592 IPR004680 Citrate transporter-like domain YPTB2593 IPR036412 HAD-like superfamily YPTB2593 IPR006439 HAD hydrolase, subfamily IA YPTB2593 IPR041492 Haloacid dehalogenase-like hydrolase YPTB2593 IPR023214 HAD superfamily YPTB2593 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB2594 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTB2594 IPR023146 YfbU, alpha-helical bundle domain superfamily YPTB2594 IPR023145 YfbU, helix-hairpin domain superfamily YPTB2595 IPR007334 Uncharacterised protein family UPF0208 YPTB2597 IPR000890 Aliphatic acid kinase, short-chain YPTB2597 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPTB2597 IPR004372 Acetate/propionate kinase YPTB2598 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YPTB2598 IPR016475 Phosphate acetyltransferase, bacteria YPTB2598 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2598 IPR002505 Phosphate acetyl/butaryl transferase YPTB2598 IPR042112 Phosphate acetyltransferase, domain 2 YPTB2598 IPR042113 Phosphate acetyltransferase, domain 1 YPTB2598 IPR004614 Phosphate acetyltransferase YPTB2598 IPR010766 DRTGG YPTB2599 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2599 IPR000843 LacI-type HTH domain YPTB2599 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB2599 IPR028082 Periplasmic binding protein-like I YPTB2600 IPR016152 Phosphotransferase/anion transporter YPTB2600 IPR002178 PTS EIIA type-2 domain YPTB2602 IPR004703 Phosphotransferase system, sugar-specific permease component YPTB2603 IPR015797 NUDIX hydrolase-like domain superfamily YPTB2603 IPR000086 NUDIX hydrolase domain YPTB2603 IPR024195 NUDIX hydrolase, YfcD, predicted YPTB2604 IPR041802 YfcE-like, metallophosphatase domain YPTB2604 IPR000979 Phosphodiesterase MJ0936/Vps29 YPTB2604 IPR029052 Metallo-dependent phosphatase-like YPTB2604 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type YPTB2604 IPR020935 Phosphodiesterase YfcE, conserved site YPTB2606 IPR010099 Epimerase family protein SDR39U1 YPTB2606 IPR036291 NAD(P)-binding domain superfamily YPTB2606 IPR001509 NAD-dependent epimerase/dehydratase YPTB2606 IPR013549 Domain of unknown function DUF1731 YPTB2607 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTB2607 IPR017871 ABC transporter, conserved site YPTB2607 IPR003439 ABC transporter-like YPTB2607 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2607 IPR003593 AAA+ ATPase domain YPTB2608 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB2608 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2608 IPR035906 MetI-like superfamily YPTB2609 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB2609 IPR035906 MetI-like superfamily YPTB2609 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2609 IPR030199 Histidine transport system permease protein HisQ YPTB2610 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTB2610 IPR018313 Solute-binding protein family 3, conserved site YPTB2610 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB2611 IPR004507 Flavin prenyltransferase UbiX-like YPTB2611 IPR003382 Flavoprotein YPTB2611 IPR036551 Flavin prenyltransferase-like YPTB2612 IPR005854 Amidophosphoribosyltransferase YPTB2612 IPR017932 Glutamine amidotransferase type 2 domain YPTB2612 IPR029057 Phosphoribosyltransferase-like YPTB2612 IPR000836 Phosphoribosyltransferase domain YPTB2612 IPR035584 Amidophosphoribosyltransferase, N-terminal YPTB2612 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB2613 IPR003825 Colicin V production, CvpA YPTB2614 IPR036680 Sporulation-like domain superfamily YPTB2614 IPR007730 Sporulation-like domain YPTB2614 IPR032898 Cell division protein DedD YPTB2615 IPR013221 Mur ligase, central YPTB2615 IPR036615 Mur ligase, C-terminal domain superfamily YPTB2615 IPR004101 Mur ligase, C-terminal YPTB2615 IPR036565 Mur-like, catalytic domain superfamily YPTB2615 IPR018109 Folylpolyglutamate synthetase, conserved site YPTB2615 IPR001645 Folylpolyglutamate synthetase YPTB2616 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPTB2616 IPR034733 Acetyl-CoA carboxylase YPTB2616 IPR029045 ClpP/crotonase-like domain superfamily YPTB2616 IPR041010 Acetyl-coA carboxylase zinc finger domain YPTB2616 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal YPTB2617 IPR032818 DedA family YPTB2617 IPR032816 SNARE associated Golgi protein YPTB2618 IPR001406 Pseudouridine synthase I, TruA YPTB2618 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB2618 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPTB2618 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPTB2619 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTB2619 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTB2619 IPR036291 NAD(P)-binding domain superfamily YPTB2620 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPTB2620 IPR038251 PdxB, dimerisation domain superfamily YPTB2620 IPR036291 NAD(P)-binding domain superfamily YPTB2620 IPR020921 Erythronate-4-phosphate dehydrogenase YPTB2620 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB2620 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB2620 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB2620 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB2622 IPR000620 EamA domain YPTB2623 IPR023597 Flagellar regulator Flk YPTB2624 IPR036937 Fimbrial-type adhesion domain superfamily YPTB2624 IPR008966 Adhesion domain superfamily YPTB2624 IPR000259 Fimbrial-type adhesion domain YPTB2625 IPR033134 Asp/Glu racemase, active site 2 YPTB2625 IPR001920 Asp/Glu racemase YPTB2625 IPR015942 Asp/Glu/hydantoin racemase YPTB2625 IPR004380 Aspartate racemase YPTB2625 IPR018187 Asp/Glu racemase, active site 1 YPTB2626 IPR014030 Beta-ketoacyl synthase, N-terminal YPTB2626 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTB2626 IPR016039 Thiolase-like YPTB2626 IPR014031 Beta-ketoacyl synthase, C-terminal YPTB2626 IPR018201 Beta-ketoacyl synthase, active site YPTB2626 IPR000794 Beta-ketoacyl synthase YPTB2627 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPTB2627 IPR006076 FAD dependent oxidoreductase YPTB2627 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2627 IPR008471 MnmC-like methyltransferase YPTB2627 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2627 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPTB2628 IPR014987 Uncharacterised protein family YfcL YPTB2629 IPR007411 Elongation factor P hydroxylase YPTB2630 IPR002781 Transmembrane protein TauE-like YPTB2631 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPTB2631 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTB2632 IPR035904 Chorismate synthase AroC superfamily YPTB2632 IPR000453 Chorismate synthase YPTB2632 IPR020541 Chorismate synthase, conserved site YPTB2633 IPR007848 Methyltransferase small domain YPTB2633 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPTB2633 IPR004556 Methyltransferase HemK-like YPTB2633 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB2633 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2634 IPR002625 Smr domain YPTB2634 IPR022990 Uncharacterised protein family UPF0115 YPTB2634 IPR036063 Smr domain superfamily YPTB2635 IPR029033 Histidine phosphatase superfamily YPTB2635 IPR013078 Histidine phosphatase superfamily, clade-1 YPTB2635 IPR004449 Phosphohistidine phosphatase SixA YPTB2636 IPR036291 NAD(P)-binding domain superfamily YPTB2636 IPR001753 Enoyl-CoA hydratase/isomerase YPTB2636 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPTB2636 IPR029045 ClpP/crotonase-like domain superfamily YPTB2636 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB2636 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPTB2636 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPTB2636 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPTB2637 IPR020615 Thiolase, acyl-enzyme intermediate active site YPTB2637 IPR012806 Acetyl-CoA C-acyltransferase FadI YPTB2637 IPR002155 Thiolase YPTB2637 IPR016039 Thiolase-like YPTB2637 IPR020610 Thiolase, active site YPTB2637 IPR020616 Thiolase, N-terminal YPTB2637 IPR020613 Thiolase, conserved site YPTB2637 IPR020617 Thiolase, C-terminal YPTB2638 IPR035571 UPF0234-like, C-terminal YPTB2638 IPR005272 Conserved hypothetical protein CHP00743 YPTB2639 IPR042117 OMPP1/FadL/TodX superfamily YPTB2639 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPTB2640 IPR007428 MlaA lipoprotein YPTB2641 IPR005616 CcmH/CycL/Ccl2/NrfF family YPTB2641 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPTB2641 IPR013026 Tetratricopeptide repeat-containing domain YPTB2641 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB2641 IPR019734 Tetratricopeptide repeat YPTB2642 IPR005616 CcmH/CycL/Ccl2/NrfF family YPTB2642 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB2642 IPR013026 Tetratricopeptide repeat-containing domain YPTB2642 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPTB2642 IPR019734 Tetratricopeptide repeat YPTB2643 IPR017937 Thioredoxin, conserved site YPTB2643 IPR036249 Thioredoxin-like superfamily YPTB2643 IPR013766 Thioredoxin domain YPTB2643 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPTB2643 IPR013740 Redoxin YPTB2644 IPR002541 Cytochrome c assembly protein YPTB2644 IPR003567 Cytochrome c-type biogenesis protein YPTB2644 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPTB2644 IPR003568 Cytochrome c-type biogenesis protein CcmF YPTB2645 IPR004329 CcmE/CycJ protein YPTB2645 IPR036127 CcmE-like superfamily YPTB2646 IPR007078 Haem exporter protein D (CcmD) YPTB2647 IPR003557 Cytochrome c-type biogenesis protein CcmC YPTB2647 IPR002541 Cytochrome c assembly protein YPTB2648 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPTB2648 IPR003544 Cytochrome c-type biogenesis protein CcmB YPTB2649 IPR003593 AAA+ ATPase domain YPTB2649 IPR005895 ABC transporter, haem export, CcmA YPTB2649 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2649 IPR017871 ABC transporter, conserved site YPTB2649 IPR003439 ABC transporter-like YPTB2651 IPR007156 LemA YPTB2651 IPR023353 LemA-like domain superfamily YPTB2653 IPR004624 PhnA protein YPTB2653 IPR013988 PhnA protein, C-terminal YPTB2653 IPR013987 PhnA protein, N-terminal YPTB2659 IPR037026 Vgr protein, OB-fold domain superfamily YPTB2659 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB2659 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB2659 IPR006531 Gp5 N-terminal YPTB2668 IPR037224 PapC, N-terminal domain superfamily YPTB2668 IPR018030 Fimbrial membrane usher, conserved site YPTB2668 IPR042186 Outer membrane usher protein FimD, plug domain YPTB2668 IPR025949 PapC-like, C-terminal domain YPTB2668 IPR025885 PapC, N-terminal domain YPTB2668 IPR000015 Outer membrane usher protein YPTB2669 IPR001829 Pili assembly chaperone, bacterial YPTB2669 IPR018046 Pili assembly chaperone, conserved site YPTB2669 IPR016147 Pili assembly chaperone, N-terminal YPTB2669 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB2669 IPR016148 Pili assembly chaperone, C-terminal YPTB2669 IPR008962 PapD-like superfamily YPTB2669 IPR013783 Immunoglobulin-like fold YPTB2670 IPR039458 FimA-like YPTB2670 IPR008966 Adhesion domain superfamily YPTB2670 IPR036937 Fimbrial-type adhesion domain superfamily YPTB2671 IPR028299 ClpA/B, conserved site 2 YPTB2671 IPR041546 ClpA/ClpB, AAA lid domain YPTB2671 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2671 IPR001270 ClpA/B family YPTB2671 IPR004176 Clp, N-terminal YPTB2671 IPR036628 Clp, N-terminal domain superfamily YPTB2671 IPR019489 Clp ATPase, C-terminal YPTB2671 IPR003593 AAA+ ATPase domain YPTB2671 IPR018368 ClpA/B, conserved site 1 YPTB2671 IPR003959 ATPase, AAA-type, core YPTB2671 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB2681 IPR011757 Lytic transglycosylase MltB YPTB2681 IPR023346 Lysozyme-like domain superfamily YPTB2681 IPR031304 Transglycosylase SLT domain 2 YPTB2682 IPR026045 Ferric binding protein YPTB2682 IPR006061 Solute-binding family 1, conserved site YPTB2683 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2683 IPR035906 MetI-like superfamily YPTB2684 IPR003593 AAA+ ATPase domain YPTB2684 IPR003439 ABC transporter-like YPTB2684 IPR017871 ABC transporter, conserved site YPTB2684 IPR015853 ABC transporter, ferric cation import, FbpC YPTB2684 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2684 IPR030287 Fe(3+) ions import ATP-binding protein FbpC YPTB2684 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2686 IPR008514 Type VI secretion system effector, Hcp YPTB2686 IPR036624 Hcp1-like superfamily YPTB2688 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTB2688 IPR006656 Molybdopterin oxidoreductase YPTB2688 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB2688 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPTB2688 IPR006657 Molybdopterin dinucleotide-binding domain YPTB2688 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB2688 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTB2689 IPR014297 Dimethylsulphoxide reductase, chain B YPTB2689 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2689 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2690 IPR007059 DMSO reductase anchor subunit (DmsC) YPTB2691 IPR020945 DMSO/Nitrate reductase chaperone YPTB2691 IPR026269 Tat proofreading chaperone DmsD-type YPTB2691 IPR028611 Tat proofreading chaperone DmsD YPTB2691 IPR036411 TorD-like superfamily YPTB2693 IPR008517 Protein of unknown function DUF799 YPTB2695 IPR005534 Curli production assembly/transport component CsgG YPTB2697 IPR016174 Di-haem cytochrome, transmembrane YPTB2697 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTB2698 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2698 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2698 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2698 IPR004839 Aminotransferase, class I/classII YPTB2699 IPR027443 Isopenicillin N synthase-like YPTB2699 IPR010856 Protein of unknown function DUF1479 YPTB2700 IPR003836 Glucokinase YPTB2702 IPR000847 Transcription regulator HTH, LysR YPTB2702 IPR005119 LysR, substrate-binding YPTB2702 IPR036390 Winged helix DNA-binding domain superfamily YPTB2702 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2703 IPR023210 NADP-dependent oxidoreductase domain YPTB2703 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB2705 IPR001046 NRAMP family YPTB2706 IPR008276 Concentrative nucleoside transporter YPTB2706 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTB2706 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPTB2706 IPR011657 Concentrative nucleoside transporter C-terminal domain YPTB2706 IPR002668 Concentrative nucleoside transporter N-terminal domain YPTB2707 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPTB2707 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB2707 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPTB2707 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2707 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTB2707 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTB2707 IPR033910 Glutamyl-tRNA synthetase YPTB2707 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPTB2710 IPR024530 Putative quorum-sensing-regulated virulence factor YPTB2711 IPR018239 NAD-dependent DNA ligase, active site YPTB2711 IPR036420 BRCT domain superfamily YPTB2711 IPR033136 NAD-dependent DNA ligase, conserved site YPTB2711 IPR001679 NAD-dependent DNA ligase YPTB2711 IPR013839 NAD-dependent DNA ligase, adenylation YPTB2711 IPR013840 NAD-dependent DNA ligase, N-terminal YPTB2711 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTB2711 IPR012340 Nucleic acid-binding, OB-fold YPTB2711 IPR004150 NAD-dependent DNA ligase, OB-fold YPTB2711 IPR010994 RuvA domain 2-like YPTB2711 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPTB2711 IPR001357 BRCT domain YPTB2711 IPR041663 DisA/LigA, helix-hairpin-helix motif YPTB2712 IPR007449 ZipA, C-terminal FtsZ-binding domain YPTB2712 IPR011919 Cell division protein ZipA YPTB2712 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily YPTB2713 IPR022985 Sulfate transporter CysZ YPTB2714 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB2714 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB2714 IPR005856 Cysteine synthase YPTB2714 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTB2714 IPR005859 Cysteine synthase CysK YPTB2715 IPR000032 Phosphocarrier protein HPr-like YPTB2715 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB2715 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTB2715 IPR035895 HPr-like superfamily YPTB2716 IPR023151 PEP-utilising enzyme, conserved site YPTB2716 IPR040442 Pyruvate kinase-like domain superfamily YPTB2716 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB2716 IPR036618 PtsI, HPr-binding domain superfamily YPTB2716 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTB2716 IPR006318 Phosphotransferase system, enzyme I-like YPTB2716 IPR024692 Phosphotransferase system, enzyme I YPTB2716 IPR036637 Phosphohistidine domain superfamily YPTB2716 IPR008279 PEP-utilising enzyme, mobile domain YPTB2716 IPR000121 PEP-utilising enzyme, C-terminal YPTB2716 IPR018274 PEP-utilising enzyme, active site YPTB2717 IPR011055 Duplicated hybrid motif YPTB2717 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPTB2718 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2718 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPTB2718 IPR038515 CpxA, periplasmic domain superfamily YPTB2718 IPR003660 HAMP domain YPTB2718 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2718 IPR005467 Histidine kinase domain YPTB2718 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2718 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2718 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2719 IPR039420 Transcriptional regulatory protein WalR-like YPTB2719 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2719 IPR011006 CheY-like superfamily YPTB2719 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2719 IPR001789 Signal transduction response regulator, receiver domain YPTB2720 IPR006143 RND efflux pump, membrane fusion protein YPTB2720 IPR030190 Macrolide export protein MacA YPTB2720 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB2721 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTB2721 IPR017871 ABC transporter, conserved site YPTB2721 IPR003439 ABC transporter-like YPTB2721 IPR003838 ABC transporter permease protein domain YPTB2721 IPR003593 AAA+ ATPase domain YPTB2721 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2721 IPR025857 MacB-like periplasmic core domain YPTB2722 IPR023536 Coenzyme A disulphide reductase, staphyolococci YPTB2722 IPR017758 Coenzyme A disulphide reductase YPTB2722 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTB2722 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2722 IPR023753 FAD/NAD(P)-binding domain YPTB2722 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTB2723 IPR038377 Sodium/glucose symporter superfamily YPTB2723 IPR001734 Sodium/solute symporter YPTB2725 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTB2725 IPR000994 Peptidase M24 YPTB2725 IPR036005 Creatinase/aminopeptidase-like YPTB2725 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB2725 IPR007865 Aminopeptidase P, N-terminal YPTB2726 IPR004839 Aminotransferase, class I/classII YPTB2726 IPR027619 Putative C-S lyase YPTB2726 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2726 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2726 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2728 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2728 IPR005467 Histidine kinase domain YPTB2728 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2728 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2728 IPR003660 HAMP domain YPTB2728 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2728 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2729 IPR039420 Transcriptional regulatory protein WalR-like YPTB2729 IPR001789 Signal transduction response regulator, receiver domain YPTB2729 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2729 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2729 IPR011006 CheY-like superfamily YPTB2729 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2731 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTB2731 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB2731 IPR005856 Cysteine synthase YPTB2731 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB2731 IPR005858 Cysteine synthase CysM YPTB2732 IPR005666 Sulphate transport system permease protein 1 YPTB2732 IPR017871 ABC transporter, conserved site YPTB2732 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal YPTB2732 IPR003439 ABC transporter-like YPTB2732 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2732 IPR003593 AAA+ ATPase domain YPTB2732 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2733 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2733 IPR011866 Sulphate ABC transporter, permease protein CysW YPTB2733 IPR035906 MetI-like superfamily YPTB2733 IPR005667 Sulphate ABC transporter permease protein 2 YPTB2734 IPR005667 Sulphate ABC transporter permease protein 2 YPTB2734 IPR035906 MetI-like superfamily YPTB2734 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2734 IPR011865 Sulphate ABC transporter, permease protein CysT YPTB2735 IPR034408 Sulphate/thiosulphate-binding site YPTB2735 IPR000957 Sulphate/thiosulphate-binding, conserved site YPTB2735 IPR005669 Thiosulphate/Sulfate-binding protein YPTB2736 IPR004742 Sialic acid transporter YPTB2736 IPR020846 Major facilitator superfamily domain YPTB2736 IPR011701 Major facilitator superfamily YPTB2736 IPR036259 MFS transporter superfamily YPTB2737 IPR009057 Homeobox-like domain superfamily YPTB2737 IPR035472 RpiR-like, SIS domain YPTB2737 IPR001347 Sugar isomerase (SIS) YPTB2737 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2737 IPR000281 Helix-turn-helix protein RpiR YPTB2738 IPR037012 YhcH/YjgK/YiaL superfamily YPTB2738 IPR004375 YhcH/YjgK/YiaL family YPTB2739 IPR023945 N-acetylmannosamine kinase, bacterial YPTB2739 IPR000600 ROK family YPTB2740 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTB2740 IPR032675 Leucine-rich repeat domain superfamily YPTB2740 IPR001611 Leucine-rich repeat YPTB2741 IPR011060 Ribulose-phosphate binding barrel YPTB2741 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPTB2741 IPR013785 Aldolase-type TIM barrel YPTB2742 IPR005264 N-acetylneuraminate lyase YPTB2742 IPR020625 Schiff base-forming aldolase, active site YPTB2742 IPR002220 DapA-like YPTB2742 IPR013785 Aldolase-type TIM barrel YPTB2743 IPR011008 Dimeric alpha-beta barrel YPTB2743 IPR006314 Dyp-type peroxidase YPTB2744 IPR038714 YfeY-like superfamily YPTB2744 IPR010938 Protein of unknown function DUF1131 YPTB2745 IPR036700 Bacterial OB-fold superfamily YPTB2745 IPR005220 Bacterial OB-fold YPTB2745 IPR016052 Bacteriophage 933W, L0136 YPTB2746 IPR011050 Pectin lyase fold/virulence factor YPTB2746 IPR024973 ESPR domain YPTB2746 IPR005546 Autotransporter beta-domain YPTB2746 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB2746 IPR030930 Adhesin of bacterial autotransporter system YPTB2746 IPR004899 Pertactin, central region YPTB2746 IPR003991 Pertactin virulence factor family YPTB2746 IPR006315 Outer membrane autotransporter barrel YPTB2746 IPR036709 Autotransporter beta-domain superfamily YPTB2753 IPR023072 Acetyltransferase, YpeA YPTB2753 IPR016181 Acyl-CoA N-acyltransferase YPTB2753 IPR000182 GNAT domain YPTB2754 IPR018375 Coproporphyrinogen III oxidase, conserved site YPTB2754 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily YPTB2754 IPR001260 Coproporphyrinogen III oxidase, aerobic YPTB2755 IPR003791 Protein of unknown function UPF0178 YPTB2756 IPR015884 Malic enzyme, conserved site YPTB2756 IPR036291 NAD(P)-binding domain superfamily YPTB2756 IPR042113 Phosphate acetyltransferase, domain 1 YPTB2756 IPR042112 Phosphate acetyltransferase, domain 2 YPTB2756 IPR002505 Phosphate acetyl/butaryl transferase YPTB2756 IPR037062 Malic enzyme, N-terminal domain superfamily YPTB2756 IPR012188 NAD(P)-dependent malic enzyme YPTB2756 IPR012302 Malic enzyme, NAD-binding YPTB2756 IPR012301 Malic enzyme, N-terminal domain YPTB2757 IPR000086 NUDIX hydrolase domain YPTB2757 IPR015797 NUDIX hydrolase-like domain superfamily YPTB2757 IPR004385 Nucleoside diphosphate pyrophosphatase YPTB2758 IPR038266 NapC/NirT cytochrome c superfamily YPTB2758 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPTB2758 IPR005126 NapC/NirT cytochrome c, N-terminal YPTB2758 IPR011031 Multihaem cytochrome YPTB2758 IPR024717 Denitrification system component NapC/NirT/NrfH YPTB2758 IPR036280 Multiheme cytochrome superfamily YPTB2759 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPTB2759 IPR036280 Multiheme cytochrome superfamily YPTB2759 IPR011031 Multihaem cytochrome YPTB2760 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB2760 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTB2760 IPR010051 Periplasmic nitrate reductase, large subunit YPTB2760 IPR006656 Molybdopterin oxidoreductase YPTB2760 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTB2760 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB2760 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain YPTB2760 IPR006657 Molybdopterin dinucleotide-binding domain YPTB2760 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTB2761 IPR005623 Chaperone NapD, nitrate reductase assembly YPTB2762 IPR004496 Ferredoxin-type protein NapF YPTB2762 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2762 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2763 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2763 IPR000792 Transcription regulator LuxR, C-terminal YPTB2763 IPR001789 Signal transduction response regulator, receiver domain YPTB2763 IPR011006 CheY-like superfamily YPTB2765 IPR001036 Acriflavin resistance protein YPTB2765 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTB2765 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB2767 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTB2768 IPR023885 4Fe4S-binding SPASM domain YPTB2768 IPR013785 Aldolase-type TIM barrel YPTB2768 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPTB2768 IPR007197 Radical SAM YPTB2769 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB2769 IPR000917 Sulfatase, N-terminal YPTB2769 IPR024607 Sulfatase, conserved site YPTB2770 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTB2770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2770 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTB2770 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2770 IPR003439 ABC transporter-like YPTB2770 IPR017871 ABC transporter, conserved site YPTB2770 IPR003593 AAA+ ATPase domain YPTB2770 IPR013611 Transport-associated OB, type 2 YPTB2771 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2771 IPR035906 MetI-like superfamily YPTB2774 IPR006660 Arsenate reductase-like YPTB2774 IPR036249 Thioredoxin-like superfamily YPTB2774 IPR006504 Transcriptional regulator Spx/MgsR YPTB2775 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPTB2775 IPR002933 Peptidase M20 YPTB2775 IPR036264 Bacterial exopeptidase dimerisation domain YPTB2775 IPR011650 Peptidase M20, dimerisation domain YPTB2775 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTB2776 IPR003709 Peptidase M15B YPTB2776 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTB2777 IPR020910 Uncharacterised protein family UPF0370 YPTB2778 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2778 IPR000182 GNAT domain YPTB2778 IPR007807 Helicase domain YPTB2778 IPR016181 Acyl-CoA N-acyltransferase YPTB2778 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YPTB2778 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPTB2778 IPR032672 TmcA/NAT10/Kre33 YPTB2778 IPR038321 TmcA, C-terminal domain superfamily YPTB2778 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPTB2779 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPTB2780 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPTB2781 IPR018236 SAICAR synthetase, conserved site YPTB2781 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPTB2781 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase YPTB2781 IPR028923 SAICAR synthetase/ADE2, N-terminal YPTB2782 IPR014524 Outer membrane protein assembly factor BamC YPTB2782 IPR042268 Outer membrane protein assembly factor BamC, C-terminal YPTB2782 IPR010653 NlpB/DapX lipoprotein YPTB2783 IPR020624 Schiff base-forming aldolase, conserved site YPTB2783 IPR020625 Schiff base-forming aldolase, active site YPTB2783 IPR002220 DapA-like YPTB2783 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPTB2783 IPR013785 Aldolase-type TIM barrel YPTB2784 IPR016867 Glycine cleavage system transcriptional repressor YPTB2784 IPR002912 ACT domain YPTB2785 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTB2785 IPR024706 Peroxiredoxin, AhpC-type YPTB2785 IPR036249 Thioredoxin-like superfamily YPTB2785 IPR013766 Thioredoxin domain YPTB2789 IPR002549 Transmembrane protein TqsA-like YPTB2790 IPR011716 Tetratricopeptide TPR-3 YPTB2790 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB2790 IPR030873 Beta-barrel assembly-enhancing protease YPTB2790 IPR001915 Peptidase M48 YPTB2791 IPR006659 Arsenate reductase YPTB2791 IPR036249 Thioredoxin-like superfamily YPTB2791 IPR006660 Arsenate reductase-like YPTB2792 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPTB2792 IPR017788 DnaA regulatory inactivator Hda YPTB2792 IPR013317 Chromosomal replication initiator protein DnaA YPTB2792 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB2792 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2793 IPR006043 Xanthine/uracil/vitamin C permease YPTB2793 IPR029935 Uracil permease YPTB2793 IPR006042 Xanthine/uracil permease YPTB2794 IPR000836 Phosphoribosyltransferase domain YPTB2794 IPR029057 Phosphoribosyltransferase-like YPTB2794 IPR005765 Uracil phosphoribosyl transferase YPTB2794 IPR034332 Uracil phosphoribosyltransferase, bacterial-type YPTB2795 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPTB2795 IPR036921 PurM-like, N-terminal domain superfamily YPTB2795 IPR016188 PurM-like, N-terminal domain YPTB2795 IPR036676 PurM-like, C-terminal domain superfamily YPTB2795 IPR010918 PurM-like, C-terminal domain YPTB2796 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPTB2796 IPR036477 Formyl transferase, N-terminal domain superfamily YPTB2796 IPR004607 Phosphoribosylglycinamide formyltransferase YPTB2796 IPR002376 Formyl transferase, N-terminal YPTB2797 IPR000182 GNAT domain YPTB2797 IPR016181 Acyl-CoA N-acyltransferase YPTB2799 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2799 IPR005670 Phosphate transport system permease protein 1 YPTB2799 IPR017871 ABC transporter, conserved site YPTB2799 IPR003439 ABC transporter-like YPTB2799 IPR015850 ABC transporter, phosphate import, PstB YPTB2799 IPR003593 AAA+ ATPase domain YPTB2800 IPR005672 Phosphate transport system permease protein PstA YPTB2800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2800 IPR035906 MetI-like superfamily YPTB2801 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2801 IPR035906 MetI-like superfamily YPTB2801 IPR011864 Phosphate ABC transporter, permease protein PstC YPTB2802 IPR036832 Polyphosphate kinase N-terminal domain superfamily YPTB2802 IPR025200 Polyphosphate kinase C-terminal domain 2 YPTB2802 IPR036830 Polyphosphate kinase middle domain superfamily YPTB2802 IPR024953 Polyphosphate kinase middle domain YPTB2802 IPR025198 Polyphosphate kinase N-terminal domain YPTB2802 IPR003414 Polyphosphate kinase YPTB2802 IPR001736 Phospholipase D/Transphosphatidylase YPTB2802 IPR041108 Polyphosphate kinase, C-terminal domain 1 YPTB2803 IPR022371 Exopolyphosphatase YPTB2803 IPR003695 Ppx/GppA phosphatase YPTB2803 IPR030673 Pyrophosphatase, GppA/Ppx-type YPTB2805 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily YPTB2805 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPTB2805 IPR006669 Magnesium transporter MgtE YPTB2805 IPR000644 CBS domain YPTB2805 IPR038048 Magnesium transporter MgtE, transmembrane domain YPTB2805 IPR038076 MgtE, N-terminal domain superfamily YPTB2805 IPR006668 Magnesium transporter, MgtE intracellular domain YPTB2806 IPR042054 YegD-like YPTB2806 IPR013126 Heat shock protein 70 family YPTB2806 IPR018181 Heat shock protein 70, conserved site YPTB2807 IPR035906 MetI-like superfamily YPTB2807 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2808 IPR035906 MetI-like superfamily YPTB2808 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2810 IPR005814 Aminotransferase class-III YPTB2810 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2810 IPR004632 4-aminobutyrate aminotransferase, bacterial YPTB2810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2811 IPR000524 Transcription regulator HTH, GntR YPTB2811 IPR004839 Aminotransferase, class I/classII YPTB2811 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2811 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2811 IPR036390 Winged helix DNA-binding domain superfamily YPTB2811 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2812 IPR003593 AAA+ ATPase domain YPTB2812 IPR013611 Transport-associated OB, type 2 YPTB2812 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTB2812 IPR003439 ABC transporter-like YPTB2812 IPR017871 ABC transporter, conserved site YPTB2812 IPR008995 Molybdate/tungstate binding, C-terminal YPTB2812 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2812 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTB2813 IPR006143 RND efflux pump, membrane fusion protein YPTB2813 IPR022824 Multidrug resistance protein MdtA YPTB2813 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTB2814 IPR001036 Acriflavin resistance protein YPTB2814 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB2814 IPR022831 Multidrug resistance protein MdtB YPTB2815 IPR023931 Multidrug resistance protein MdtC YPTB2815 IPR001036 Acriflavin resistance protein YPTB2815 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB2816 IPR023721 Multidrug resistance protein MdtD YPTB2816 IPR036259 MFS transporter superfamily YPTB2816 IPR020846 Major facilitator superfamily domain YPTB2816 IPR011701 Major facilitator superfamily YPTB2817 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2817 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2817 IPR005467 Histidine kinase domain YPTB2817 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2817 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2817 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2817 IPR003660 HAMP domain YPTB2818 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2818 IPR016032 Signal transduction response regulator, C-terminal effector YPTB2818 IPR001789 Signal transduction response regulator, receiver domain YPTB2818 IPR011006 CheY-like superfamily YPTB2818 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2818 IPR039420 Transcriptional regulatory protein WalR-like YPTB2819 IPR010879 Domain of unknown function DUF1508 YPTB2819 IPR036913 YegP-like superfamily YPTB2821 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPTB2821 IPR005218 Diacylglycerol/lipid kinase YPTB2821 IPR001206 Diacylglycerol kinase, catalytic domain YPTB2821 IPR022433 Lipid kinase YegS YPTB2821 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPTB2822 IPR014453 Inhibitor of vertebrate lysozyme YPTB2822 IPR036501 Inhibitor of vertebrate lysozyme superfamily YPTB2824 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPTB2824 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPTB2824 IPR029056 Ribokinase-like YPTB2831 IPR008514 Type VI secretion system effector, Hcp YPTB2831 IPR036624 Hcp1-like superfamily YPTB2832 IPR004739 GMP synthase, glutamine amidotransferase YPTB2832 IPR022310 NAD/GMP synthase YPTB2832 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2832 IPR022955 GMP synthase YPTB2832 IPR025777 GMP synthetase ATP pyrophosphatase domain YPTB2832 IPR001674 GMP synthase, C-terminal YPTB2832 IPR017926 Glutamine amidotransferase YPTB2832 IPR029062 Class I glutamine amidotransferase-like YPTB2833 IPR001093 IMP dehydrogenase/GMP reductase YPTB2833 IPR005990 Inosine-5'-monophosphate dehydrogenase YPTB2833 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPTB2833 IPR000644 CBS domain YPTB2833 IPR013785 Aldolase-type TIM barrel YPTB2834 IPR020579 Exonuclease VII, large subunit, C-terminal YPTB2834 IPR025824 OB-fold nucleic acid binding domain YPTB2834 IPR003753 Exonuclease VII, large subunit YPTB2835 IPR029037 YfgJ-like YPTB2835 IPR010807 Protein of unknown function DUF1407 YPTB2837 IPR031166 EngA-type guanine nucleotide-binding (G) domain YPTB2837 IPR005225 Small GTP-binding protein domain YPTB2837 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2837 IPR032859 GTPase Der, C-terminal KH-domain-like YPTB2837 IPR006073 GTP binding domain YPTB2837 IPR016484 GTP-binding protein EngA YPTB2837 IPR015946 K homology domain-like, alpha/beta YPTB2838 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTB2838 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPTB2838 IPR002372 Pyrrolo-quinoline quinone repeat YPTB2838 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTB2838 IPR017687 Outer membrane protein assembly factor BamB YPTB2839 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB2839 IPR026039 Uncharacterised protein family UPF0070 YPTB2839 IPR018704 Tetratricopeptide repeat-like domain YPTB2840 IPR033656 Histidyl-anticodon-binding YPTB2840 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPTB2840 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain YPTB2840 IPR015807 Histidine-tRNA ligase YPTB2840 IPR036621 Anticodon-binding domain superfamily YPTB2840 IPR004154 Anticodon-binding YPTB2840 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB2841 IPR011005 Dihydropteroate synthase-like YPTB2841 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPTB2841 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPTB2841 IPR036849 Enolase-like, C-terminal domain superfamily YPTB2842 IPR001387 Cro/C1-type helix-turn-helix domain YPTB2842 IPR025194 Domain of unknown function DUF4115 YPTB2842 IPR023690 Cytoskeleton protein RodZ YPTB2842 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB2844 IPR007197 Radical SAM YPTB2844 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPTB2844 IPR027492 Dual-specificity RNA methyltransferase RlmN YPTB2844 IPR040072 Methyltransferase (Class A) YPTB2844 IPR013785 Aldolase-type TIM barrel YPTB2845 IPR023005 Nucleoside diphosphate kinase, active site YPTB2845 IPR036850 Nucleoside diphosphate kinase-like domain superfamily YPTB2845 IPR034907 Nucleoside diphosphate kinase-like domain YPTB2845 IPR001564 Nucleoside diphosphate kinase YPTB2848 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB2848 IPR006315 Outer membrane autotransporter barrel YPTB2848 IPR004899 Pertactin, central region YPTB2848 IPR011050 Pectin lyase fold/virulence factor YPTB2848 IPR036709 Autotransporter beta-domain superfamily YPTB2848 IPR003991 Pertactin virulence factor family YPTB2848 IPR030930 Adhesin of bacterial autotransporter system YPTB2848 IPR005546 Autotransporter beta-domain YPTB2849 IPR036709 Autotransporter beta-domain superfamily YPTB2849 IPR030930 Adhesin of bacterial autotransporter system YPTB2849 IPR005546 Autotransporter beta-domain YPTB2849 IPR011050 Pectin lyase fold/virulence factor YPTB2849 IPR003991 Pertactin virulence factor family YPTB2849 IPR004899 Pertactin, central region YPTB2849 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB2849 IPR006315 Outer membrane autotransporter barrel YPTB2850 IPR011050 Pectin lyase fold/virulence factor YPTB2850 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB2850 IPR006315 Outer membrane autotransporter barrel YPTB2850 IPR036709 Autotransporter beta-domain superfamily YPTB2850 IPR003991 Pertactin virulence factor family YPTB2850 IPR030930 Adhesin of bacterial autotransporter system YPTB2850 IPR004899 Pertactin, central region YPTB2850 IPR005546 Autotransporter beta-domain YPTB2851 IPR009839 SseB protein N-terminal domain YPTB2851 IPR027945 SseB protein, C-terminal YPTB2852 IPR008330 Peptidase M17, peptidase B YPTB2852 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPTB2852 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPTB2852 IPR001346 Interferon regulatory factor DNA-binding domain YPTB2853 IPR036762 IscX-like superfamily YPTB2853 IPR007479 ISC system FeS cluster assembly, IscX YPTB2854 IPR018298 Adrenodoxin, iron-sulphur binding site YPTB2854 IPR012675 Beta-grasp domain superfamily YPTB2854 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria YPTB2854 IPR001055 Adrenodoxin YPTB2854 IPR036010 2Fe-2S ferredoxin-like superfamily YPTB2854 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTB2855 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPTB2855 IPR013126 Heat shock protein 70 family YPTB2855 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPTB2855 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPTB2855 IPR042039 HscA chaperone, nucleotide-binding domain YPTB2855 IPR018181 Heat shock protein 70, conserved site YPTB2856 IPR036869 Chaperone J-domain superfamily YPTB2856 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPTB2856 IPR036386 HscB, C-terminal domain superfamily YPTB2856 IPR004640 Co-chaperone Hsc20 YPTB2856 IPR001623 DnaJ domain YPTB2857 IPR000361 FeS cluster biogenesis YPTB2857 IPR016092 FeS cluster insertion protein YPTB2857 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTB2857 IPR035903 HesB-like domain superfamily YPTB2857 IPR011302 Iron-binding protein IscA, proteobacteria YPTB2858 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPTB2858 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPTB2859 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2859 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2859 IPR016454 Cysteine desulfurase YPTB2859 IPR010240 Cysteine desulfurase IscS YPTB2859 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2859 IPR000192 Aminotransferase class V domain YPTB2859 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB2860 IPR000944 Transcription regulator Rrf2-type YPTB2860 IPR030489 Transcription regulator Rrf2-type, conserved site YPTB2860 IPR010242 Transcription factor HTH, IscR YPTB2860 IPR036390 Winged helix DNA-binding domain superfamily YPTB2860 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2861 IPR029028 Alpha/beta knot methyltransferases YPTB2861 IPR004384 RNA methyltransferase TrmJ/LasT YPTB2861 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB2861 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTB2862 IPR020550 Inositol monophosphatase, conserved site YPTB2862 IPR000760 Inositol monophosphatase-like YPTB2862 IPR033942 Inositol monophosphatase YPTB2862 IPR020583 Inositol monophosphatase, metal-binding site YPTB2862 IPR022337 Inositol monophosphatase, SuhB YPTB2863 IPR011541 Nickel/cobalt transporter, high-affinity YPTB2864 IPR010412 Protein of unknown function DUF1007 YPTB2864 IPR016537 Uncharacterised conserved protein UCP008159, YPTB2865 IPR036634 PRD domain superfamily YPTB2865 IPR011608 PRD domain YPTB2866 IPR036259 MFS transporter superfamily YPTB2866 IPR024989 Major facilitator superfamily associated domain YPTB2866 IPR026032 Probable 3-phenylpropionic acid transporter YPTB2867 IPR027385 Outer membrane protein beta-barrel domain YPTB2867 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB2867 IPR000758 Virulence-related outer membrane protein YPTB2869 IPR015424 Pyridoxal phosphate-dependent transferase YPTB2869 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB2869 IPR001085 Serine hydroxymethyltransferase YPTB2869 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPTB2869 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB2869 IPR039429 Serine hydroxymethyltransferase-like domain YPTB2870 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTB2870 IPR017938 Riboflavin synthase-like beta-barrel YPTB2870 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTB2870 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB2870 IPR000971 Globin YPTB2870 IPR009050 Globin-like superfamily YPTB2870 IPR012292 Globin/Protoglobin YPTB2870 IPR023950 Flavohemoprotein YPTB2870 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTB2870 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB2871 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YPTB2871 IPR041444 YhfZ, helix-turn-helix domain YPTB2872 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTB2872 IPR002187 Nitrogen regulatory protein PII YPTB2872 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTB2872 IPR017918 Nitrogen regulatory protein PII, conserved site YPTB2872 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPTB2873 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2873 IPR022310 NAD/GMP synthase YPTB2873 IPR003694 NAD(+) synthetase YPTB2873 IPR003010 Carbon-nitrogen hydrolase YPTB2873 IPR000132 Nitrilase/cyanide hydratase, conserved site YPTB2873 IPR014445 Glutamine-dependent NAD(+) synthetase YPTB2873 IPR036526 Carbon-nitrogen hydrolase superfamily YPTB2874 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB2874 IPR003593 AAA+ ATPase domain YPTB2874 IPR011006 CheY-like superfamily YPTB2874 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB2874 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2874 IPR001789 Signal transduction response regulator, receiver domain YPTB2874 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB2874 IPR025944 Sigma-54 interaction domain, conserved site YPTB2874 IPR009057 Homeobox-like domain superfamily YPTB2875 IPR025262 Quorum-sensing regulator protein G YPTB2876 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2876 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2876 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2876 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2876 IPR005467 Histidine kinase domain YPTB2876 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2879 IPR010073 Phosphoribosylformylglycinamidine synthase PurL YPTB2879 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain YPTB2879 IPR010918 PurM-like, C-terminal domain YPTB2879 IPR029062 Class I glutamine amidotransferase-like YPTB2879 IPR036676 PurM-like, C-terminal domain superfamily YPTB2879 IPR036921 PurM-like, N-terminal domain superfamily YPTB2879 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily YPTB2879 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal YPTB2879 IPR017926 Glutamine amidotransferase YPTB2880 IPR023703 Membrane-bound lytic murein transglycosylase F YPTB2880 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB2880 IPR000189 Prokaryotic transglycosylase, active site YPTB2880 IPR023346 Lysozyme-like domain superfamily YPTB2880 IPR008258 Transglycosylase SLT domain 1 YPTB2881 IPR016193 Cytidine deaminase-like YPTB2881 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTB2881 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTB2881 IPR028883 tRNA-specific adenosine deaminase YPTB2882 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPTB2882 IPR023214 HAD superfamily YPTB2882 IPR036412 HAD-like superfamily YPTB2883 IPR005486 Glucokinase regulatory protein, conserved site YPTB2883 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein YPTB2883 IPR001347 Sugar isomerase (SIS) YPTB2883 IPR009060 UBA-like superfamily YPTB2883 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPTB2884 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2884 IPR001347 Sugar isomerase (SIS) YPTB2884 IPR035472 RpiR-like, SIS domain YPTB2884 IPR009057 Homeobox-like domain superfamily YPTB2884 IPR000281 Helix-turn-helix protein RpiR YPTB2885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB2885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB2886 IPR004568 Phosphopantetheine-protein transferase domain YPTB2886 IPR008278 4'-phosphopantetheinyl transferase domain YPTB2886 IPR002582 Holo-[acyl carrier protein] synthase YPTB2886 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPTB2887 IPR036130 Pyridoxine 5'-phosphate synthase YPTB2887 IPR013785 Aldolase-type TIM barrel YPTB2887 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPTB2888 IPR003717 Recombination protein O, RecO YPTB2888 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPTB2888 IPR012340 Nucleic acid-binding, OB-fold YPTB2888 IPR037278 ARFGAP/RecO-like zinc finger YPTB2889 IPR030388 Era-type guanine nucleotide-binding (G) domain YPTB2889 IPR005225 Small GTP-binding protein domain YPTB2889 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2889 IPR009019 K homology domain superfamily, prokaryotic type YPTB2889 IPR005662 GTP-binding protein Era YPTB2889 IPR004044 K Homology domain, type 2 YPTB2889 IPR006073 GTP binding domain YPTB2889 IPR015946 K homology domain-like, alpha/beta YPTB2890 IPR014720 Double-stranded RNA-binding domain YPTB2890 IPR036389 Ribonuclease III, endonuclease domain superfamily YPTB2890 IPR011907 Ribonuclease III YPTB2890 IPR000999 Ribonuclease III domain YPTB2891 IPR036286 LexA/Signal peptidase-like superfamily YPTB2891 IPR000223 Peptidase S26A, signal peptidase I YPTB2891 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPTB2891 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPTB2891 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPTB2891 IPR019533 Peptidase S26 YPTB2892 IPR000640 Elongation factor EFG, domain V-like YPTB2892 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB2892 IPR031157 Tr-type G domain, conserved site YPTB2892 IPR038363 LepA, C-terminal domain superfamily YPTB2892 IPR000795 Transcription factor, GTP-binding domain YPTB2892 IPR013842 GTP-binding protein LepA, C-terminal YPTB2892 IPR005225 Small GTP-binding protein domain YPTB2892 IPR035654 Elongation factor 4, domain IV YPTB2892 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2892 IPR006297 Elongation factor 4 YPTB2892 IPR035647 EF-G domain III/V-like YPTB2894 IPR007359 Positive regulator of sigma(E), RseC/MucC YPTB2894 IPR026268 Protein RseC YPTB2895 IPR033434 MucB/RseB, N-terminal YPTB2895 IPR038484 MucB/RseB, C-terminal domain superfamily YPTB2895 IPR033436 MucB/RseB, C-terminal YPTB2895 IPR005588 MucB/RseB YPTB2896 IPR026279 Sigma-E factor negative regulatory protein RseA YPTB2896 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily YPTB2896 IPR005572 Anti sigma-E protein RseA, N-terminal YPTB2896 IPR005573 Anti sigma-E protein RseA, C-terminal YPTB2897 IPR013325 RNA polymerase sigma factor, region 2 YPTB2897 IPR039425 RNA polymerase sigma-70 like YPTB2897 IPR014284 RNA polymerase sigma-70 like domain YPTB2897 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPTB2897 IPR007627 RNA polymerase sigma-70 region 2 YPTB2897 IPR014286 RNA polymerase sigma-70 RpoE type YPTB2897 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2897 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPTB2897 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB2898 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTB2898 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTB2898 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB2898 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTB2898 IPR005288 L-aspartate oxidase YPTB2898 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTB2899 IPR007848 Methyltransferase small domain YPTB2899 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2899 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPTB2899 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB2900 IPR028621 ATP-dependent RNA helicase SrmB YPTB2900 IPR011545 DEAD/DEAH box helicase domain YPTB2900 IPR014014 RNA helicase, DEAD-box type, Q motif YPTB2900 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB2900 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTB2900 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2900 IPR001650 Helicase, C-terminal YPTB2901 IPR036770 Ankyrin repeat-containing domain superfamily YPTB2901 IPR020683 Ankyrin repeat-containing domain YPTB2901 IPR002110 Ankyrin repeat YPTB2902 IPR029058 Alpha/Beta hydrolase fold YPTB2903 IPR001150 Glycine radical domain YPTB2903 IPR011140 Autonomous glycyl radical cofactor GrcA YPTB2903 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTB2904 IPR036895 Uracil-DNA glycosylase-like domain superfamily YPTB2904 IPR005122 Uracil-DNA glycosylase-like YPTB2904 IPR018085 Uracil-DNA glycosylase, active site YPTB2904 IPR002043 Uracil-DNA glycosylase family 1 YPTB2905 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPTB2905 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPTB2905 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily YPTB2905 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPTB2905 IPR033693 Pyroglutamyl peptidase I, Glu active site YPTB2905 IPR033694 Pyroglutamyl peptidase I, Cys active site YPTB2908 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB2908 IPR005501 LamB/YcsF/PxpA-like YPTB2909 IPR029000 Cyclophilin-like domain superfamily YPTB2909 IPR003778 Carboxyltransferase domain, subdomain A and B YPTB2910 IPR010016 KipI family YPTB2910 IPR029000 Cyclophilin-like domain superfamily YPTB2910 IPR003833 Carboxyltransferase domain, subdomain C and D YPTB2911 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTB2911 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YPTB2912 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB2912 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPTB2912 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPTB2913 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2913 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily YPTB2913 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPTB2913 IPR002081 Cryptochrome/DNA photolyase class 1 YPTB2913 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPTB2913 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily YPTB2913 IPR006050 DNA photolyase, N-terminal YPTB2914 IPR013560 Domain of unknown function DUF1722 YPTB2915 IPR019663 Uncharacterised protein YbfA YPTB2916 IPR004623 Potassium-transporting ATPase A chain YPTB2917 IPR006391 P-type ATPase, B chain, subfamily IA YPTB2917 IPR036412 HAD-like superfamily YPTB2917 IPR023299 P-type ATPase, cytoplasmic domain N YPTB2917 IPR018303 P-type ATPase, phosphorylation site YPTB2917 IPR008250 P-type ATPase, A domain superfamily YPTB2917 IPR023298 P-type ATPase, transmembrane domain superfamily YPTB2917 IPR001757 P-type ATPase YPTB2918 IPR003820 Potassium-transporting ATPase C chain YPTB2919 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB2919 IPR038318 KdpD, transmembrane domain superfamily YPTB2919 IPR003018 GAF domain YPTB2919 IPR029016 GAF-like domain superfamily YPTB2919 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB2919 IPR005467 Histidine kinase domain YPTB2919 IPR003594 Histidine kinase/HSP90-like ATPase YPTB2919 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB2919 IPR025201 Sensor protein KdpD, transmembrane domain YPTB2919 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB2919 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPTB2920 IPR039420 Transcriptional regulatory protein WalR-like YPTB2920 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB2920 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB2920 IPR001789 Signal transduction response regulator, receiver domain YPTB2920 IPR011006 CheY-like superfamily YPTB2923 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTB2923 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPTB2923 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTB2923 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTB2923 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTB2923 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTB2923 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTB2923 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTB2924 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal YPTB2924 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily YPTB2924 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPTB2924 IPR005621 Negative modulator of initiation of replication SeqA YPTB2924 IPR010985 Ribbon-helix-helix YPTB2924 IPR013321 Arc-type ribbon-helix-helix YPTB2927 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria YPTB2927 IPR006879 Carbohydrate deacetylase YdjC-like YPTB2927 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTB2928 IPR013096 Cupin 2, conserved barrel YPTB2928 IPR009057 Homeobox-like domain superfamily YPTB2928 IPR020449 Transcription regulator HTH, AraC- type YPTB2928 IPR018060 DNA binding HTH domain, AraC-type YPTB2928 IPR011051 RmlC-like cupin domain superfamily YPTB2928 IPR014710 RmlC-like jelly roll fold YPTB2928 IPR018062 HTH domain AraC-type, conserved site YPTB2929 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily YPTB2929 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit YPTB2931 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTB2931 IPR036095 PTS system IIB component-like superfamily YPTB2931 IPR013012 Phosphotransferase system, EIIB component, type 3 YPTB2932 IPR003691 Putative fluoride ion transporter CrcB YPTB2933 IPR003691 Putative fluoride ion transporter CrcB YPTB2934 IPR003148 Regulator of K+ conductance, N-terminal YPTB2934 IPR036291 NAD(P)-binding domain superfamily YPTB2934 IPR013099 Potassium channel domain YPTB2935 IPR010486 HNS-dependent expression A/B YPTB2935 IPR038303 HNS-dependent expression A/B superfamily YPTB2935 IPR028623 HNS-dependent expression B YPTB2936 IPR011541 Nickel/cobalt transporter, high-affinity YPTB2936 IPR004688 Transition metal uptake transporter nickel/cobalt YPTB2937 IPR004937 Urea transporter YPTB2937 IPR029020 Ammonium/urea transporter YPTB2938 IPR002669 Urease accessory protein UreD YPTB2939 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTB2939 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2939 IPR004400 Urease accessory protein UreG YPTB2940 IPR038277 UreF domain superfamily YPTB2940 IPR002639 Urease accessory protein UreF YPTB2941 IPR004029 UreE urease accessory, N-terminal YPTB2941 IPR007864 Urease accessory protein UreE, C-terminal domain YPTB2941 IPR012406 Urease accessory protein UreE YPTB2941 IPR036118 UreE urease accessory, N-terminal domain superfamily YPTB2942 IPR006680 Amidohydrolase-related YPTB2942 IPR017951 Urease alpha subunit, C-terminal YPTB2942 IPR005848 Urease, alpha subunit YPTB2942 IPR017950 Urease active site YPTB2942 IPR011612 Urease alpha-subunit, N-terminal domain YPTB2942 IPR032466 Metal-dependent hydrolase YPTB2942 IPR029754 Urease nickel binding site YPTB2942 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB2943 IPR002019 Urease, beta subunit YPTB2943 IPR036461 Urease, beta subunit superfamily YPTB2944 IPR002026 Urease, gamma/gamma-beta subunit YPTB2944 IPR012010 Urease, gamma subunit YPTB2944 IPR036463 Urease, gamma subunit superfamily YPTB2945 IPR015858 ABC transporter, nickel import, NikE YPTB2945 IPR017871 ABC transporter, conserved site YPTB2945 IPR003439 ABC transporter-like YPTB2945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2945 IPR003593 AAA+ ATPase domain YPTB2945 IPR014137 Nickel import ATP-binding protein NikE YPTB2946 IPR015863 ABC transporter, hemin import, HmuV YPTB2946 IPR017871 ABC transporter, conserved site YPTB2946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2946 IPR003593 AAA+ ATPase domain YPTB2946 IPR003439 ABC transporter-like YPTB2947 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB2947 IPR035906 MetI-like superfamily YPTB2947 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2948 IPR035906 MetI-like superfamily YPTB2948 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2949 IPR000914 Solute-binding protein family 5 domain YPTB2949 IPR023765 Solute-binding protein family 5, conserved site YPTB2949 IPR039424 Solute-binding protein family 5 YPTB2949 IPR030678 Peptide/nickel binding protein, MppA-type YPTB2949 IPR011980 Nickel ABC transporter, substrate-binding protein NikA YPTB2950 IPR012340 Nucleic acid-binding, OB-fold YPTB2950 IPR002059 Cold-shock protein, DNA-binding YPTB2950 IPR011129 Cold shock domain YPTB2950 IPR012156 Cold shock, CspA YPTB2950 IPR019844 Cold-shock (CSD) domain YPTB2952 IPR009587 Protein of unknown function DUF1198 YPTB2953 IPR018994 Protein of unknown function DUF2002 YPTB2954 IPR009435 Acid shock YPTB2954 IPR023497 Acid shock protein YPTB2956 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPTB2956 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPTB2956 IPR029039 Flavoprotein-like superfamily YPTB2957 IPR013554 Ribonucleotide reductase N-terminal YPTB2957 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPTB2957 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPTB2957 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPTB2957 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPTB2957 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPTB2957 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPTB2958 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPTB2958 IPR012348 Ribonucleotide reductase-like YPTB2958 IPR009078 Ferritin-like superfamily YPTB2958 IPR000358 Ribonucleotide reductase small subunit family YPTB2958 IPR030475 Ribonucleotide reductase small subunit, acitve site YPTB2958 IPR033909 Ribonucleotide reductase small subunit YPTB2959 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2959 IPR005892 Glycine betaine transport ATP-binding subunit YPTB2959 IPR003439 ABC transporter-like YPTB2959 IPR017871 ABC transporter, conserved site YPTB2959 IPR000644 CBS domain YPTB2959 IPR003593 AAA+ ATPase domain YPTB2960 IPR035906 MetI-like superfamily YPTB2960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2961 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTB2963 IPR038271 Purine-cytosine permease superfamily YPTB2963 IPR001248 Purine-cytosine permease YPTB2963 IPR012681 Nucleobase cation symporter-1, NCS1 YPTB2964 IPR012337 Ribonuclease H-like superfamily YPTB2964 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTB2964 IPR006309 DNA polymerase 3, epsilon subunit YPTB2964 IPR036397 Ribonuclease H superfamily YPTB2964 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPTB2965 IPR002156 Ribonuclease H domain YPTB2965 IPR022892 Ribonuclease HI YPTB2965 IPR036397 Ribonuclease H superfamily YPTB2965 IPR012337 Ribonuclease H-like superfamily YPTB2966 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB2966 IPR013216 Methyltransferase type 11 YPTB2966 IPR026669 Arsenite methyltransferase-like YPTB2967 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain YPTB2967 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain YPTB2967 IPR017782 Hydroxyacylglutathione hydrolase YPTB2967 IPR001279 Metallo-beta-lactamase YPTB2967 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB2968 IPR023346 Lysozyme-like domain superfamily YPTB2968 IPR036779 LysM domain superfamily YPTB2968 IPR000189 Prokaryotic transglycosylase, active site YPTB2968 IPR018392 LysM domain YPTB2968 IPR008258 Transglycosylase SLT domain 1 YPTB2969 IPR005135 Endonuclease/exonuclease/phosphatase YPTB2969 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPTB2969 IPR022958 Uncharacterised protein family UPF0294 YPTB2971 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB2971 IPR020471 Aldo/keto reductase YPTB2971 IPR018170 Aldo/keto reductase, conserved site YPTB2971 IPR023210 NADP-dependent oxidoreductase domain YPTB2972 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPTB2972 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTB2972 IPR023214 HAD superfamily YPTB2972 IPR036412 HAD-like superfamily YPTB2972 IPR006543 Histidinol-phosphate phosphatase YPTB2973 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB2973 IPR018449 NIL domain YPTB2973 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPTB2973 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPTB2973 IPR003593 AAA+ ATPase domain YPTB2973 IPR026253 Methionine import ATP-binding protein MetN YPTB2973 IPR017871 ABC transporter, conserved site YPTB2973 IPR003439 ABC transporter-like YPTB2973 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPTB2974 IPR035906 MetI-like superfamily YPTB2974 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB2975 IPR004872 Lipoprotein NlpA family YPTB2976 IPR030852 Outer membrane lipoprotein RcsF YPTB2977 IPR023370 TrmO-like, N-terminal domain YPTB2977 IPR041369 TrmO, C-terminal YPTB2977 IPR023368 Uncharacterised protein family UPF0066, conserved site YPTB2977 IPR040372 YaeB-like YPTB2977 IPR036413 YaeB-like superfamily YPTB2977 IPR036414 YaeB, N-terminal domain superfamily YPTB2978 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTB2978 IPR033730 Prokaryote proline-tRNA ligase core domain YPTB2978 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPTB2978 IPR002316 Proline-tRNA ligase, class IIa YPTB2978 IPR036621 Anticodon-binding domain superfamily YPTB2978 IPR004154 Anticodon-binding YPTB2978 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB2978 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPTB2978 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPTB2978 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPTB2979 IPR038139 NlpE, C-terminal domain superfamily YPTB2979 IPR033450 NlpE, C-terminal OB domain YPTB2979 IPR007298 Copper resistance lipoprotein NlpE YPTB2980 IPR000352 Peptide chain release factor class I YPTB2981 IPR038590 YaeQ superfamily YPTB2981 IPR009822 YaeQ YPTB2981 IPR011335 Restriction endonuclease type II-like YPTB2982 IPR009624 Uncharacterised protein family UPF0253 YPTB2983 IPR038626 Rof-like superfamily YPTB2983 IPR023534 Rof/RNase P-like YPTB2983 IPR009778 Modulator of Rho-dependent transcription termination YPTB2984 IPR009056 Cytochrome c-like domain YPTB2984 IPR036909 Cytochrome c-like domain superfamily YPTB2984 IPR008168 Cytochrome c, class IC YPTB2985 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain YPTB2985 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal YPTB2985 IPR012094 tRNA(Ile)-lysidine synthase YPTB2985 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTB2985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB2985 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPTB2986 IPR037523 Vicinal oxygen chelate (VOC) domain YPTB2986 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTB2986 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTB2986 IPR037478 YwkD-like domain YPTB2987 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal YPTB2987 IPR029045 ClpP/crotonase-like domain superfamily YPTB2987 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPTB2988 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain YPTB2988 IPR016195 Polymerase/histidinol phosphatase-like YPTB2988 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain YPTB2988 IPR040982 DNA polymerase III alpha subunit finger domain YPTB2988 IPR029460 DNA polymerase, helix-hairpin-helix motif YPTB2988 IPR004805 DNA polymerase III, alpha subunit YPTB2988 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTB2988 IPR004013 PHP domain YPTB2988 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTB2989 IPR012337 Ribonuclease H-like superfamily YPTB2989 IPR001352 Ribonuclease HII/HIII YPTB2989 IPR022898 Ribonuclease HII YPTB2989 IPR024567 Ribonuclease HII/HIII domain YPTB2989 IPR036397 Ribonuclease H superfamily YPTB2990 IPR003835 Glycosyl transferase, family 19 YPTB2991 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal YPTB2991 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily YPTB2991 IPR001451 Hexapeptide repeat YPTB2991 IPR011004 Trimeric LpxA-like superfamily YPTB2991 IPR018357 Hexapeptide transferase, conserved site YPTB2991 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPTB2992 IPR029069 HotDog domain superfamily YPTB2992 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTB2992 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPTB2993 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPTB2993 IPR011004 Trimeric LpxA-like superfamily YPTB2993 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD YPTB2993 IPR018357 Hexapeptide transferase, conserved site YPTB2993 IPR001451 Hexapeptide repeat YPTB2994 IPR005632 Chaperone protein Skp YPTB2994 IPR024930 Skp domain superfamily YPTB2995 IPR034746 POTRA domain YPTB2995 IPR023707 Outer membrane protein assembly factor BamA YPTB2995 IPR039910 Surface antigen D15-like YPTB2995 IPR010827 POTRA domain, BamA/TamA-like YPTB2995 IPR000184 Bacterial surface antigen (D15) YPTB2996 IPR008915 Peptidase M50 YPTB2996 IPR001478 PDZ domain YPTB2996 IPR041489 PDZ domain 6 YPTB2996 IPR036034 PDZ superfamily YPTB2996 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPTB2997 IPR000374 Phosphatidate cytidylyltransferase YPTB2998 IPR001441 Decaprenyl diphosphate synthase-like YPTB2998 IPR036424 Decaprenyl diphosphate synthase-like superfamily YPTB2998 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPTB2999 IPR026877 DXP reductoisomerase C-terminal domain YPTB2999 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPTB2999 IPR036169 DXP reductoisomerase, C-terminal domain superfamily YPTB2999 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPTB2999 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPTB2999 IPR036291 NAD(P)-binding domain superfamily YPTB3000 IPR002661 Ribosome recycling factor YPTB3000 IPR023584 Ribosome recycling factor domain YPTB3000 IPR036191 RRF superfamily YPTB3001 IPR001048 Aspartate/glutamate/uridylate kinase YPTB3001 IPR036393 Acetylglutamate kinase-like superfamily YPTB3001 IPR011817 Uridylate kinase YPTB3001 IPR015963 Uridylate kinase, bacteria YPTB3002 IPR001816 Translation elongation factor EFTs/EF1B YPTB3002 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPTB3002 IPR018101 Translation elongation factor Ts, conserved site YPTB3002 IPR009060 UBA-like superfamily YPTB3002 IPR036402 Elongation factor Ts, dimerisation domain superfamily YPTB3003 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YPTB3003 IPR001865 Ribosomal protein S2 YPTB3003 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPTB3003 IPR018130 Ribosomal protein S2, conserved site YPTB3004 IPR001714 Peptidase M24, methionine aminopeptidase YPTB3004 IPR036005 Creatinase/aminopeptidase-like YPTB3004 IPR000994 Peptidase M24 YPTB3004 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPTB3005 IPR006674 HD domain YPTB3005 IPR002912 ACT domain YPTB3005 IPR003607 HD/PDEase domain YPTB3005 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPTB3005 IPR002934 Polymerase, nucleotidyl transferase domain YPTB3005 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme YPTB3006 IPR018357 Hexapeptide transferase, conserved site YPTB3006 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPTB3006 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPTB3006 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily YPTB3006 IPR001451 Hexapeptide repeat YPTB3006 IPR011004 Trimeric LpxA-like superfamily YPTB3007 IPR020911 Uncharacterised protein family UPF0325 YPTB3008 IPR029039 Flavoprotein-like superfamily YPTB3008 IPR008254 Flavodoxin/nitric oxide synthase YPTB3008 IPR001094 Flavodoxin-like YPTB3009 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTB3009 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTB3009 IPR006145 Pseudouridine synthase, RsuA/RluA YPTB3010 IPR023376 YqcC-like domain YPTB3010 IPR036814 YqcC-like superfamily YPTB3010 IPR007384 Protein of unknown function UCP006257 YPTB3011 IPR009948 Syd YPTB3011 IPR038228 Syd superfamily YPTB3012 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPTB3012 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPTB3012 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPTB3013 IPR031100 LOG family YPTB3013 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal YPTB3013 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily YPTB3013 IPR021826 Domain of unknown function DUF3412 YPTB3014 IPR022895 Flap endonuclease Xni YPTB3014 IPR038969 Flap endonuclease YPTB3014 IPR020045 DNA polymerase I-like, H3TH domain YPTB3014 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPTB3014 IPR029060 PIN-like domain superfamily YPTB3014 IPR002421 5'-3' exonuclease, N-terminal YPTB3014 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPTB3014 IPR008918 Helix-hairpin-helix motif, class 2 YPTB3015 IPR040739 RlmM ferredoxin-like domain YPTB3015 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPTB3015 IPR011224 Ribosomal RNA large subunit methyltransferase M YPTB3015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3016 IPR006696 Protein of unknown function DUF423 YPTB3017 IPR005119 LysR, substrate-binding YPTB3017 IPR000847 Transcription regulator HTH, LysR YPTB3017 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3017 IPR036390 Winged helix DNA-binding domain superfamily YPTB3018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTB3018 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB3018 IPR000192 Aminotransferase class V domain YPTB3018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPTB3018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3019 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPTB3019 IPR003808 Fe-S metabolism associated domain, SufE-like YPTB3020 IPR035985 Ubiquitin-activating enzyme YPTB3020 IPR000594 THIF-type NAD/FAD binding fold YPTB3021 IPR005300 Lytic transglycosylase MltA, domain B YPTB3021 IPR034654 MltA, 3D domain YPTB3021 IPR026044 Membrane-bound lytic murein transglycosylase A YPTB3021 IPR010611 3D domain YPTB3021 IPR036908 RlpA-like domain superfamily YPTB3022 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPTB3022 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB3022 IPR021731 AMIN domain YPTB3023 IPR010167 Amino-acid N-acetyltransferase YPTB3023 IPR036393 Acetylglutamate kinase-like superfamily YPTB3023 IPR001048 Aspartate/glutamate/uridylate kinase YPTB3023 IPR000182 GNAT domain YPTB3023 IPR033719 N-acetylglutamate synthase, kinase-like domain YPTB3023 IPR016181 Acyl-CoA N-acyltransferase YPTB3024 IPR003593 AAA+ ATPase domain YPTB3024 IPR006344 RecBCD enzyme subunit RecD YPTB3024 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain YPTB3024 IPR027785 UvrD-like helicase C-terminal domain YPTB3024 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3025 IPR034739 UvrD/AddA helicase, N-terminal YPTB3025 IPR014016 UvrD-like helicase, ATP-binding domain YPTB3025 IPR014017 UvrD-like DNA helicase, C-terminal YPTB3025 IPR000212 DNA helicase, UvrD/REP type YPTB3025 IPR004586 RecBCD enzyme subunit RecB YPTB3025 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPTB3025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3025 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YPTB3025 IPR011335 Restriction endonuclease type II-like YPTB3026 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTB3026 IPR011765 Peptidase M16, N-terminal YPTB3026 IPR001431 Peptidase M16, zinc-binding site YPTB3026 IPR007863 Peptidase M16, C-terminal YPTB3026 IPR032632 Peptidase M16, middle/third domain YPTB3027 IPR006697 RecBCD enzyme subunit RecC YPTB3027 IPR041500 RecC, C-terminal YPTB3027 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3027 IPR013986 DExx box DNA helicase domain superfamily YPTB3027 IPR011335 Restriction endonuclease type II-like YPTB3033 IPR000398 Thymidylate synthase YPTB3033 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily YPTB3033 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPTB3033 IPR020940 Thymidylate synthase, active site YPTB3034 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt YPTB3035 IPR040442 Pyruvate kinase-like domain superfamily YPTB3035 IPR003018 GAF domain YPTB3035 IPR008279 PEP-utilising enzyme, mobile domain YPTB3035 IPR018274 PEP-utilising enzyme, active site YPTB3035 IPR000121 PEP-utilising enzyme, C-terminal YPTB3035 IPR029016 GAF-like domain superfamily YPTB3035 IPR036637 Phosphohistidine domain superfamily YPTB3035 IPR006318 Phosphotransferase system, enzyme I-like YPTB3035 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTB3035 IPR036618 PtsI, HPr-binding domain superfamily YPTB3035 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB3035 IPR023151 PEP-utilising enzyme, conserved site YPTB3036 IPR000086 NUDIX hydrolase domain YPTB3036 IPR022927 RNA pyrophosphohydrolase RppH YPTB3036 IPR020084 NUDIX hydrolase, conserved site YPTB3036 IPR015797 NUDIX hydrolase-like domain superfamily YPTB3036 IPR020476 NUDIX hydrolase YPTB3037 IPR004230 DNA mismatch repair protein MutH YPTB3037 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily YPTB3037 IPR011335 Restriction endonuclease type II-like YPTB3037 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPTB3038 IPR023210 NADP-dependent oxidoreductase domain YPTB3038 IPR020471 Aldo/keto reductase YPTB3038 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB3041 IPR036259 MFS transporter superfamily YPTB3041 IPR011701 Major facilitator superfamily YPTB3041 IPR023727 Lysophospholipid transporter LplT YPTB3042 IPR002123 Phospholipid/glycerol acyltransferase YPTB3042 IPR000873 AMP-dependent synthetase/ligase YPTB3042 IPR025110 AMP-binding enzyme, C-terminal domain YPTB3042 IPR023775 Bifunctional protein Aas YPTB3042 IPR042099 AMP-dependent synthetase-like superfamily YPTB3042 IPR020845 AMP-binding, conserved site YPTB3043 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTB3043 IPR009010 Aspartate decarboxylase-like domain superfamily YPTB3043 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase YPTB3043 IPR006657 Molybdopterin dinucleotide-binding domain YPTB3043 IPR006656 Molybdopterin oxidoreductase YPTB3044 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3044 IPR028082 Periplasmic binding protein-like I YPTB3044 IPR000843 LacI-type HTH domain YPTB3045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTB3045 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPTB3045 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPTB3045 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPTB3045 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPTB3045 IPR000183 Ornithine/DAP/Arg decarboxylase YPTB3045 IPR029066 PLP-binding barrel YPTB3045 IPR002986 Diaminopimelate decarboxylase, LysA YPTB3046 IPR036390 Winged helix DNA-binding domain superfamily YPTB3046 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3046 IPR005119 LysR, substrate-binding YPTB3046 IPR000847 Transcription regulator HTH, LysR YPTB3046 IPR037414 Transcriptional activator protein LysR, PBP2 domain YPTB3047 IPR011701 Major facilitator superfamily YPTB3047 IPR020846 Major facilitator superfamily domain YPTB3047 IPR036259 MFS transporter superfamily YPTB3048 IPR000847 Transcription regulator HTH, LysR YPTB3048 IPR005119 LysR, substrate-binding YPTB3048 IPR036390 Winged helix DNA-binding domain superfamily YPTB3048 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3051 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB3051 IPR003660 HAMP domain YPTB3051 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB3051 IPR004090 Chemotaxis methyl-accepting receptor YPTB3051 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTB3051 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTB3055 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPTB3055 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPTB3055 IPR010627 Peptidase A24A, N-terminal YPTB3060 IPR010052 Type II secretion system protein I YPTB3060 IPR012902 Prokaryotic N-terminal methylation site YPTB3060 IPR003413 Type II secretion system protein I domain YPTB3062 IPR010054 General secretion pathway protein G YPTB3062 IPR000983 Bacterial general secretion pathway protein G-type pilin YPTB3062 IPR012902 Prokaryotic N-terminal methylation site YPTB3062 IPR013545 Type II secretion system protein G YPTB3063 IPR001992 Type II secretion system conserved site YPTB3063 IPR018076 Type II secretion system F domain YPTB3063 IPR003004 GspF/PilC family YPTB3063 IPR042094 Type II secretion system F domain superfamily YPTB3063 IPR011850 General secretion pathway protein F YPTB3065 IPR004845 Type II secretion system GspD, conserved site YPTB3065 IPR001775 GspD/PilQ family YPTB3065 IPR005644 NolW-like YPTB3065 IPR013356 Type II secretion system GspD YPTB3065 IPR004846 Type II/III secretion system YPTB3065 IPR038591 NolW-like superfamily YPTB3068 IPR001765 Carbonic anhydrase YPTB3068 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPTB3068 IPR036874 Carbonic anhydrase superfamily YPTB3073 IPR039174 Chondroitin sulfate ABC lyase YPTB3073 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPTB3073 IPR008929 Chondroitin AC/alginate lyase YPTB3073 IPR024200 Chondroitin sulfate ABC endolyase YPTB3073 IPR008979 Galactose-binding-like domain superfamily YPTB3073 IPR015176 Lyase, N-terminal YPTB3073 IPR015177 Lyase, catalytic YPTB3073 IPR003159 Polysaccharide lyase family 8, central domain YPTB3073 IPR011013 Galactose mutarotase-like domain superfamily YPTB3073 IPR004103 Polysaccharide lyase family 8, C-terminal YPTB3073 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTB3074 IPR000917 Sulfatase, N-terminal YPTB3074 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB3075 IPR014036 DeoR C-terminal sensor domain YPTB3075 IPR001034 DeoR-type HTH domain YPTB3075 IPR037171 NagB/RpiA transferase-like YPTB3075 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB3075 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3075 IPR036390 Winged helix DNA-binding domain superfamily YPTB3076 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ YPTB3076 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like YPTB3076 IPR013785 Aldolase-type TIM barrel YPTB3077 IPR035464 AgaS, SIS domain YPTB3077 IPR001347 Sugar isomerase (SIS) YPTB3077 IPR035466 GlmS/AgaS, SIS domain 1 YPTB3077 IPR014180 Sugar isomerase, AgaS YPTB3078 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPTB3078 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPTB3078 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPTB3079 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPTB3080 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPTB3081 IPR004701 Phosphotransferase system, mannose-type IIA component YPTB3081 IPR033887 PTS system mannose/sorbose specific IIA subunit YPTB3081 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPTB3082 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPTB3082 IPR032466 Metal-dependent hydrolase YPTB3082 IPR006680 Amidohydrolase-related YPTB3082 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB3083 IPR002347 Short-chain dehydrogenase/reductase SDR YPTB3083 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPTB3083 IPR036291 NAD(P)-binding domain superfamily YPTB3083 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTB3085 IPR007197 Radical SAM YPTB3085 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPTB3085 IPR013785 Aldolase-type TIM barrel YPTB3085 IPR023885 4Fe4S-binding SPASM domain YPTB3086 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB3086 IPR024607 Sulfatase, conserved site YPTB3086 IPR000917 Sulfatase, N-terminal YPTB3088 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY YPTB3088 IPR000771 Fructose-bisphosphate aldolase, class-II YPTB3088 IPR013785 Aldolase-type TIM barrel YPTB3088 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPTB3091 IPR023588 Transcription regulator HTH, PurR YPTB3091 IPR028082 Periplasmic binding protein-like I YPTB3091 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3091 IPR000843 LacI-type HTH domain YPTB3092 IPR020846 Major facilitator superfamily domain YPTB3092 IPR036259 MFS transporter superfamily YPTB3092 IPR011701 Major facilitator superfamily YPTB3093 IPR011013 Galactose mutarotase-like domain superfamily YPTB3093 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 YPTB3093 IPR033403 Domain of unknown function DUF5110 YPTB3093 IPR030458 Glycosyl hydrolases family 31, active site YPTB3093 IPR030459 Glycosyl hydrolases family 31, conserved site YPTB3093 IPR017853 Glycoside hydrolase superfamily YPTB3093 IPR013780 Glycosyl hydrolase, all-beta YPTB3093 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPTB3093 IPR000322 Glycoside hydrolase family 31 YPTB3094 IPR028082 Periplasmic binding protein-like I YPTB3094 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3094 IPR000843 LacI-type HTH domain YPTB3095 IPR003192 Porin, LamB-type YPTB3095 IPR023738 Maltoporin YPTB3095 IPR036998 Porin, LamB-type superfamily YPTB3097 IPR017853 Glycoside hydrolase superfamily YPTB3097 IPR013738 Beta-galactosidase trimerisation YPTB3097 IPR013780 Glycosyl hydrolase, all-beta YPTB3097 IPR003476 Glycoside hydrolase, family 42 YPTB3097 IPR029062 Class I glutamine amidotransferase-like YPTB3097 IPR013739 Beta-galactosidase C-terminal YPTB3097 IPR013529 Glycoside hydrolase, family 42, N-terminal YPTB3098 IPR011683 Glycosyl hydrolase family 53 YPTB3098 IPR017853 Glycoside hydrolase superfamily YPTB3099 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3099 IPR035906 MetI-like superfamily YPTB3100 IPR035906 MetI-like superfamily YPTB3100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3101 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPTB3101 IPR006059 Bacterial extracellular solute-binding protein YPTB3102 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3102 IPR003439 ABC transporter-like YPTB3102 IPR008995 Molybdate/tungstate binding, C-terminal YPTB3102 IPR017871 ABC transporter, conserved site YPTB3102 IPR003593 AAA+ ATPase domain YPTB3102 IPR040582 MalK, OB fold domain YPTB3103 IPR003439 ABC transporter-like YPTB3103 IPR017871 ABC transporter, conserved site YPTB3103 IPR015861 ABC transporter, ribose import, RbsA YPTB3103 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3103 IPR003593 AAA+ ATPase domain YPTB3104 IPR001851 ABC transporter, permease YPTB3105 IPR028082 Periplasmic binding protein-like I YPTB3105 IPR025997 Periplasmic binding protein YPTB3107 IPR038765 Papain-like cysteine peptidase superfamily YPTB3107 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPTB3108 IPR036390 Winged helix DNA-binding domain superfamily YPTB3108 IPR005149 Transcription regulator PadR, N-terminal YPTB3108 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3123 IPR022453 Zinc finger, MqsA-type YPTB3123 IPR032758 Antitoxin MqsA/HigA-2 YPTB3123 IPR022452 Antitoxin MqsA YPTB3123 IPR001387 Cro/C1-type helix-turn-helix domain YPTB3123 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3124 IPR038493 Toxin MqsR superfamily YPTB3124 IPR031451 mRNA interferase toxin MqsR YPTB3129 IPR023009 Tyrosine recombinase XerC/XerD YPTB3129 IPR010998 Integrase/recombinase, N-terminal YPTB3129 IPR002104 Integrase, catalytic domain YPTB3129 IPR013762 Integrase-like, catalytic domain superfamily YPTB3129 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB3129 IPR004107 Integrase, SAM-like, N-terminal YPTB3137 IPR008766 Replication gene A protein YPTB3139 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTB3139 IPR006430 Phage portal protein PBSX family YPTB3162 IPR025166 Integrase, DNA-binding domain YPTB3162 IPR038488 Integrase, DNA-binding domain superfamily YPTB3162 IPR002104 Integrase, catalytic domain YPTB3162 IPR004107 Integrase, SAM-like, N-terminal YPTB3162 IPR013762 Integrase-like, catalytic domain superfamily YPTB3162 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB3162 IPR010998 Integrase/recombinase, N-terminal YPTB3163 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTB3163 IPR002313 Lysine-tRNA ligase, class II YPTB3163 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II YPTB3163 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTB3163 IPR012340 Nucleic acid-binding, OB-fold YPTB3163 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPTB3163 IPR006195 Aminoacyl-tRNA synthetase, class II YPTB3165 IPR003156 DHHA1 domain YPTB3165 IPR001667 DDH domain YPTB3165 IPR038763 DHH phosphoesterase superfamily YPTB3165 IPR041122 RecJ, OB domain YPTB3165 IPR004610 Bacterial RecJ exonuclease YPTB3166 IPR033954 Disulphide bond isomerase, DsbC/G YPTB3166 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPTB3166 IPR013766 Thioredoxin domain YPTB3166 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily YPTB3166 IPR012336 Thioredoxin-like fold YPTB3166 IPR036249 Thioredoxin-like superfamily YPTB3166 IPR017937 Thioredoxin, conserved site YPTB3167 IPR023009 Tyrosine recombinase XerC/XerD YPTB3167 IPR011932 Tyrosine recombinase XerD YPTB3167 IPR004107 Integrase, SAM-like, N-terminal YPTB3167 IPR010998 Integrase/recombinase, N-terminal YPTB3167 IPR002104 Integrase, catalytic domain YPTB3167 IPR013762 Integrase-like, catalytic domain superfamily YPTB3167 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB3168 IPR008254 Flavodoxin/nitric oxide synthase YPTB3168 IPR010086 Flavodoxin, long chain YPTB3168 IPR001226 Flavodoxin, conserved site YPTB3168 IPR029039 Flavoprotein-like superfamily YPTB3169 IPR010364 Uncharacterised protein family, inner membrane CreD YPTB3170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3170 IPR005467 Histidine kinase domain YPTB3170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB3170 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3170 IPR029151 Periplasmic sensor-like domain superfamily YPTB3170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB3170 IPR003660 HAMP domain YPTB3170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB3171 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB3171 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3171 IPR011006 CheY-like superfamily YPTB3171 IPR039420 Transcriptional regulatory protein WalR-like YPTB3171 IPR001789 Signal transduction response regulator, receiver domain YPTB3171 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3172 IPR009883 Inner membrane protein YgfX YPTB3173 IPR005631 Flavinator of succinate dehydrogenase YPTB3173 IPR036714 Flavinator of succinate dehydrogenase superfamily YPTB3174 IPR017703 YgfZ/GcvT conserved site YPTB3174 IPR023758 tRNA-modifying protein YgfZ YPTB3174 IPR006222 Aminomethyltransferase, folate-binding domain YPTB3174 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPTB3176 IPR005744 Hly-III YPTB3176 IPR004254 AdipoR/Haemolysin-III-related YPTB3180 IPR020581 Glycine cleavage system P protein YPTB3180 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3180 IPR003437 Glycine dehydrogenase (decarboxylating) YPTB3180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB3181 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTB3181 IPR000089 Biotin/lipoyl attachment YPTB3181 IPR002930 Glycine cleavage system H-protein YPTB3181 IPR017453 Glycine cleavage system H-protein, subgroup YPTB3181 IPR033753 Glycine cleavage system H-protein/Simiate YPTB3181 IPR011053 Single hybrid motif YPTB3182 IPR006222 Aminomethyltransferase, folate-binding domain YPTB3182 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPTB3182 IPR006223 Glycine cleavage system T protein YPTB3182 IPR022903 Glycine cleavage system T protein, bacteria YPTB3182 IPR028896 Aminomethyltransferase-like YPTB3182 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPTB3182 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPTB3183 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTB3183 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTB3183 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3183 IPR002938 FAD-binding domain YPTB3184 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTB3184 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3184 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTB3184 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPTB3184 IPR002938 FAD-binding domain YPTB3185 IPR000994 Peptidase M24 YPTB3185 IPR007865 Aminopeptidase P, N-terminal YPTB3185 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTB3185 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTB3185 IPR036005 Creatinase/aminopeptidase-like YPTB3185 IPR001714 Peptidase M24, methionine aminopeptidase YPTB3186 IPR036255 YgfB-like superfamily YPTB3186 IPR011978 Uncharacterised protein family UPF0149 YPTB3187 IPR007838 Cell division protein ZapA-like YPTB3187 IPR023771 Cell division protein ZapA, eubacteria YPTB3187 IPR036192 Cell division protein ZapA-like superfamily YPTB3188 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTB3188 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YPTB3188 IPR037171 NagB/RpiA transferase-like YPTB3189 IPR036291 NAD(P)-binding domain superfamily YPTB3189 IPR002912 ACT domain YPTB3189 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB3189 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB3189 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB3189 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB3190 IPR037171 NagB/RpiA transferase-like YPTB3190 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPTB3190 IPR004788 Ribose 5-phosphate isomerase, type A YPTB3191 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3191 IPR000847 Transcription regulator HTH, LysR YPTB3191 IPR005119 LysR, substrate-binding YPTB3191 IPR036390 Winged helix DNA-binding domain superfamily YPTB3191 IPR017685 HTH-type transcriptional regulator ArgP YPTB3191 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPTB3192 IPR007497 Protein of unknown function DUF541 YPTB3193 IPR023445 Arginine exporter protein ArgO, enterobacteria YPTB3193 IPR001123 Amino acid exporter protein, LeuE-type YPTB3193 IPR004777 L-lysine exporter/arginine exporter YPTB3194 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTB3194 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTB3194 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTB3194 IPR006685 Mechanosensitive ion channel MscS YPTB3194 IPR010920 LSM domain superfamily YPTB3194 IPR008910 Conserved TM helix YPTB3194 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTB3195 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPTB3195 IPR000771 Fructose-bisphosphate aldolase, class-II YPTB3195 IPR013785 Aldolase-type TIM barrel YPTB3196 IPR015824 Phosphoglycerate kinase, N-terminal YPTB3196 IPR015911 Phosphoglycerate kinase, conserved site YPTB3196 IPR001576 Phosphoglycerate kinase YPTB3196 IPR036043 Phosphoglycerate kinase superfamily YPTB3197 IPR036291 NAD(P)-binding domain superfamily YPTB3197 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPTB3197 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPTB3197 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPTB3197 IPR006422 D-erythrose-4-phosphate dehydrogenase YPTB3197 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPTB3198 IPR005478 Transketolase, bacterial-like YPTB3198 IPR020826 Transketolase binding site YPTB3198 IPR033248 Transketolase, C-terminal domain YPTB3198 IPR033247 Transketolase family YPTB3198 IPR005474 Transketolase, N-terminal YPTB3198 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTB3198 IPR029061 Thiamin diphosphate-binding fold YPTB3198 IPR005475 Transketolase-like, pyrimidine-binding domain YPTB3199 IPR001915 Peptidase M48 YPTB3201 IPR002686 Transposase IS200-like YPTB3201 IPR036515 Transposase IS200-like superfamily YPTB3202 IPR000183 Ornithine/DAP/Arg decarboxylase YPTB3202 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPTB3202 IPR002985 Arginine decarboxylase YPTB3202 IPR041128 Arginine decarboxylase, C-terminal helical YPTB3202 IPR040634 Arginine decarboxylase, helical bundle domain YPTB3202 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTB3202 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPTB3202 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPTB3202 IPR029066 PLP-binding barrel YPTB3203 IPR022636 S-adenosylmethionine synthetase superfamily YPTB3203 IPR002133 S-adenosylmethionine synthetase YPTB3203 IPR022628 S-adenosylmethionine synthetase, N-terminal YPTB3203 IPR022631 S-adenosylmethionine synthetase, conserved site YPTB3203 IPR022629 S-adenosylmethionine synthetase, central domain YPTB3203 IPR022630 S-adenosylmethionine synthetase, C-terminal YPTB3204 IPR023483 Uncharacterised protein family SprT YPTB3204 IPR006640 SprT-like YPTB3204 IPR035240 SprT-like, zinc ribbon domain YPTB3205 IPR007346 Endonuclease I YPTB3206 IPR015947 PUA-like superfamily YPTB3206 IPR006700 Ribosomal RNA small subunit methyltransferase E YPTB3206 IPR029028 Alpha/beta knot methyltransferases YPTB3206 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTB3207 IPR013815 ATP-grasp fold, subdomain 1 YPTB3207 IPR006284 Glutathione synthetase, prokaryotic YPTB3207 IPR016185 Pre-ATP-grasp domain superfamily YPTB3207 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPTB3207 IPR011761 ATP-grasp fold YPTB3207 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPTB3208 IPR003774 Protein of unknown function UPF0301 YPTB3209 IPR006641 YqgF/RNase H-like domain YPTB3209 IPR005227 Putative pre-16S rRNA nuclease YPTB3209 IPR012337 Ribonuclease H-like superfamily YPTB3209 IPR037027 YqgF/RNase H-like domain superfamily YPTB3210 IPR036526 Carbon-nitrogen hydrolase superfamily YPTB3210 IPR003010 Carbon-nitrogen hydrolase YPTB3210 IPR023719 Aliphatic amidase YPTB3211 IPR017754 Agmatine deiminase YPTB3211 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPTB3212 IPR001482 Type II/IV secretion system protein YPTB3212 IPR003593 AAA+ ATPase domain YPTB3212 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3212 IPR006321 Pilus retraction protein PilT YPTB3213 IPR011078 Pyridoxal phosphate homeostasis protein YPTB3213 IPR029066 PLP-binding barrel YPTB3213 IPR001608 Alanine racemase, N-terminal YPTB3214 IPR000304 Pyrroline-5-carboxylate reductase YPTB3214 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPTB3214 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPTB3214 IPR036291 NAD(P)-binding domain superfamily YPTB3214 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB3215 IPR003425 CCB3/YggT YPTB3216 IPR036591 YggU-like superfamily YPTB3216 IPR005228 Conserved hypothetical protein CHP00251 YPTB3216 IPR003746 Protein of unknown function DUF167 YPTB3217 IPR020922 dITP/XTP pyrophosphatase YPTB3217 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB3217 IPR002637 Ham1-like protein YPTB3218 IPR007197 Radical SAM YPTB3218 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTB3218 IPR006638 Elp3/MiaB/NifB YPTB3218 IPR010723 HemN, C-terminal YPTB3218 IPR004559 Heme chaperone HemW-like YPTB3218 IPR023404 Radical SAM, alpha/beta horseshoe YPTB3219 IPR032074 Actin cross-linking domain YPTB3219 IPR029058 Alpha/Beta hydrolase fold YPTB3219 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain YPTB3219 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YPTB3219 IPR022742 Serine aminopeptidase, S33 YPTB3219 IPR011509 RtxA toxin YPTB3219 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB3219 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPTB3220 IPR021307 Protein of unknown function DUF2884 YPTB3221 IPR012338 Beta-lactamase/transpeptidase-like YPTB3221 IPR015868 Glutaminase YPTB3222 IPR007416 Protein of unknown function DUF469 YPTB3223 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type YPTB3223 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3224 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPTB3224 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTB3224 IPR005760 A/G-specific adenine glycosylase MutY YPTB3224 IPR000445 Helix-hairpin-helix motif YPTB3224 IPR004036 Endonuclease III-like, conserved site-2 YPTB3224 IPR003265 HhH-GPD domain YPTB3224 IPR029119 MutY, C-terminal YPTB3224 IPR015797 NUDIX hydrolase-like domain superfamily YPTB3224 IPR004035 Endonuclease III, iron-sulphur binding site YPTB3224 IPR011257 DNA glycosylase YPTB3225 IPR036766 Fe(II) trafficking protein YggX superfamily YPTB3225 IPR007457 Fe(II) trafficking protein YggX YPTB3226 IPR023346 Lysozyme-like domain superfamily YPTB3226 IPR008258 Transglycosylase SLT domain 1 YPTB3226 IPR000189 Prokaryotic transglycosylase, active site YPTB3226 IPR024570 Murein transglycosylase-C, N-terminal YPTB3226 IPR023664 Murein transglycosylase-C YPTB3228 IPR039423 TonB-dependent receptor-like YPTB3228 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB3228 IPR012910 TonB-dependent receptor, plug domain YPTB3229 IPR001851 ABC transporter, permease YPTB3230 IPR003439 ABC transporter-like YPTB3230 IPR017871 ABC transporter, conserved site YPTB3230 IPR003593 AAA+ ATPase domain YPTB3230 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3230 IPR015861 ABC transporter, ribose import, RbsA YPTB3231 IPR028082 Periplasmic binding protein-like I YPTB3231 IPR025997 Periplasmic binding protein YPTB3232 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPTB3232 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPTB3232 IPR011193 Ornithine/lysine/arginine decarboxylase YPTB3232 IPR027464 Ornithine decarboxylase, N-terminal YPTB3232 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPTB3232 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPTB3232 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3232 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB3232 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3232 IPR011006 CheY-like superfamily YPTB3236 IPR009057 Homeobox-like domain superfamily YPTB3236 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB3236 IPR003220 InsA N-terminal domain YPTB3242 IPR003220 InsA N-terminal domain YPTB3242 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB3242 IPR009057 Homeobox-like domain superfamily YPTB3246 IPR001270 ClpA/B family YPTB3246 IPR041546 ClpA/ClpB, AAA lid domain YPTB3246 IPR018368 ClpA/B, conserved site 1 YPTB3246 IPR004176 Clp, N-terminal YPTB3246 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3246 IPR019489 Clp ATPase, C-terminal YPTB3246 IPR036628 Clp, N-terminal domain superfamily YPTB3246 IPR003959 ATPase, AAA-type, core YPTB3246 IPR003593 AAA+ ATPase domain YPTB3246 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB3248 IPR028974 TSP type-3 repeat YPTB3248 IPR036737 OmpA-like domain superfamily YPTB3248 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB3248 IPR008722 Outer membrane porin F, N-terminal YPTB3248 IPR006664 Outer membrane protein, bacterial YPTB3248 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTB3248 IPR006665 OmpA-like domain YPTB3255 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTB3255 IPR003220 InsA N-terminal domain YPTB3257 IPR003675 CAAX prenyl protease 2 YPTB3258 IPR001690 Autoinducer synthase YPTB3258 IPR016181 Acyl-CoA N-acyltransferase YPTB3258 IPR018311 Autoinducer synthesis, conserved site YPTB3259 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3259 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTB3259 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPTB3259 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3259 IPR000792 Transcription regulator LuxR, C-terminal YPTB3263 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTB3263 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTB3263 IPR022770 Ferric iron reductase FhuF domain YPTB3264 IPR016181 Acyl-CoA N-acyltransferase YPTB3264 IPR019432 Siderophore biosynthesis protein, conserved domain YPTB3265 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTB3265 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTB3265 IPR022770 Ferric iron reductase FhuF domain YPTB3266 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTB3266 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3267 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB3267 IPR010917 TonB-dependent receptor, conserved site YPTB3267 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB3267 IPR037066 TonB-dependent receptor, plug domain superfamily YPTB3267 IPR012910 TonB-dependent receptor, plug domain YPTB3267 IPR039426 Vitamin B12 transporter BtuB-like YPTB3267 IPR010105 TonB-dependent siderophore receptor YPTB3267 IPR010916 TonB box, conserved site YPTB3268 IPR036259 MFS transporter superfamily YPTB3268 IPR039672 Lactose permease-like YPTB3268 IPR020846 Major facilitator superfamily domain YPTB3268 IPR001927 Sodium:galactoside symporter YPTB3268 IPR018043 Sodium:galactoside symporter, conserved site YPTB3270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3270 IPR028082 Periplasmic binding protein-like I YPTB3270 IPR000843 LacI-type HTH domain YPTB3271 IPR001898 Solute carrier family 13 YPTB3271 IPR031312 Sodium/sulphate symporter, conserved site YPTB3282 IPR022385 Rhs repeat-associated core YPTB3282 IPR001826 RHS protein YPTB3282 IPR006530 YD repeat YPTB3282 IPR031325 RHS repeat YPTB3284 IPR006531 Gp5 N-terminal YPTB3284 IPR037026 Vgr protein, OB-fold domain superfamily YPTB3284 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB3284 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB3285 IPR011050 Pectin lyase fold/virulence factor YPTB3285 IPR006315 Outer membrane autotransporter barrel YPTB3285 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB3285 IPR005546 Autotransporter beta-domain YPTB3285 IPR036709 Autotransporter beta-domain superfamily YPTB3285 IPR013425 Autotransporter-associated beta strand repeat YPTB3286 IPR011050 Pectin lyase fold/virulence factor YPTB3286 IPR005546 Autotransporter beta-domain YPTB3286 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTB3286 IPR006315 Outer membrane autotransporter barrel YPTB3286 IPR036709 Autotransporter beta-domain superfamily YPTB3286 IPR013425 Autotransporter-associated beta strand repeat YPTB3287 IPR003474 Gluconate transporter YPTB3290 IPR003439 ABC transporter-like YPTB3290 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3290 IPR011917 ABC transporter, lipid A export, MsbA YPTB3290 IPR011527 ABC transporter type 1, transmembrane domain YPTB3290 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB3290 IPR039421 Type I protein exporter YPTB3290 IPR017871 ABC transporter, conserved site YPTB3290 IPR003593 AAA+ ATPase domain YPTB3291 IPR003593 AAA+ ATPase domain YPTB3291 IPR011527 ABC transporter type 1, transmembrane domain YPTB3291 IPR003439 ABC transporter-like YPTB3291 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTB3291 IPR013113 FAD-binding 9, siderophore-interacting YPTB3291 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTB3291 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTB3291 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3291 IPR017938 Riboflavin synthase-like beta-barrel YPTB3291 IPR007037 Siderophore-interacting protein, C-terminal domain YPTB3291 IPR017871 ABC transporter, conserved site YPTB3293 IPR001031 Thioesterase YPTB3293 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPTB3293 IPR020802 Polyketide synthase, thioesterase domain YPTB3293 IPR029058 Alpha/Beta hydrolase fold YPTB3293 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB3296 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3296 IPR010071 Amino acid adenylation domain YPTB3296 IPR006162 Phosphopantetheine attachment site YPTB3296 IPR000873 AMP-dependent synthetase/ligase YPTB3296 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTB3296 IPR013217 Methyltransferase type 12 YPTB3296 IPR042099 AMP-dependent synthetase-like superfamily YPTB3296 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB3296 IPR020845 AMP-binding, conserved site YPTB3296 IPR009081 Phosphopantetheine binding ACP domain YPTB3296 IPR036736 ACP-like superfamily YPTB3296 IPR001242 Condensation domain YPTB3297 IPR013217 Methyltransferase type 12 YPTB3297 IPR001242 Condensation domain YPTB3297 IPR010071 Amino acid adenylation domain YPTB3297 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTB3297 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3297 IPR042099 AMP-dependent synthetase-like superfamily YPTB3297 IPR000873 AMP-dependent synthetase/ligase YPTB3297 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTB3297 IPR006162 Phosphopantetheine attachment site YPTB3297 IPR020845 AMP-binding, conserved site YPTB3297 IPR009081 Phosphopantetheine binding ACP domain YPTB3297 IPR036736 ACP-like superfamily YPTB3298 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTB3298 IPR010105 TonB-dependent siderophore receptor YPTB3298 IPR000531 TonB-dependent receptor-like, beta-barrel YPTB3298 IPR039426 Vitamin B12 transporter BtuB-like YPTB3298 IPR012910 TonB-dependent receptor, plug domain YPTB3299 IPR002933 Peptidase M20 YPTB3299 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTB3299 IPR036264 Bacterial exopeptidase dimerisation domain YPTB3299 IPR011650 Peptidase M20, dimerisation domain YPTB3299 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPTB3300 IPR011540 AbgT, Proteobacteria YPTB3300 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT YPTB3301 IPR029487 Novel E3 ligase domain YPTB3301 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTB3301 IPR032675 Leucine-rich repeat domain superfamily YPTB3302 IPR029487 Novel E3 ligase domain YPTB3302 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTB3302 IPR032675 Leucine-rich repeat domain superfamily YPTB3303 IPR005546 Autotransporter beta-domain YPTB3303 IPR036709 Autotransporter beta-domain superfamily YPTB3303 IPR006315 Outer membrane autotransporter barrel YPTB3303 IPR011050 Pectin lyase fold/virulence factor YPTB3305 IPR036770 Ankyrin repeat-containing domain superfamily YPTB3305 IPR012927 ShET2 enterotoxin, N-terminal YPTB3305 IPR002110 Ankyrin repeat YPTB3306 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTB3306 IPR001036 Acriflavin resistance protein YPTB3306 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTB3307 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB3307 IPR006143 RND efflux pump, membrane fusion protein YPTB3308 IPR005330 MHYT domain YPTB3308 IPR035919 EAL domain superfamily YPTB3308 IPR001633 EAL domain YPTB3308 IPR000014 PAS domain YPTB3308 IPR035965 PAS domain superfamily YPTB3308 IPR000160 GGDEF domain YPTB3308 IPR029787 Nucleotide cyclase YPTB3310 IPR038965 Transposase InsF-like YPTB3310 IPR001584 Integrase, catalytic core YPTB3310 IPR025948 HTH-like domain YPTB3310 IPR012337 Ribonuclease H-like superfamily YPTB3310 IPR036397 Ribonuclease H superfamily YPTB3311 IPR001207 Transposase, mutator type YPTB3313 IPR008816 Glycine zipper 2TM domain YPTB3318 IPR036737 OmpA-like domain superfamily YPTB3318 IPR006665 OmpA-like domain YPTB3318 IPR025713 Motility protein B, N-terminal domain YPTB3319 IPR000540 Flagellar motor protein MotA, conserved site YPTB3319 IPR022522 Flagellar motor stator, MotA YPTB3319 IPR002898 MotA/TolQ/ExbB proton channel YPTB3320 IPR007627 RNA polymerase sigma-70 region 2 YPTB3320 IPR000943 RNA polymerase sigma-70 YPTB3320 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB3320 IPR013325 RNA polymerase sigma factor, region 2 YPTB3320 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPTB3320 IPR014284 RNA polymerase sigma-70 like domain YPTB3320 IPR007630 RNA polymerase sigma-70 region 4 YPTB3325 IPR010809 Flagellar hook-associated protein 2, C-terminal YPTB3325 IPR040026 Flagellar hook-associated protein 2 YPTB3325 IPR010810 Flagellin hook, IN motif YPTB3325 IPR003481 Flagellar hook-associated protein 2, N-terminal YPTB3326 IPR001029 Flagellin, D0/D1 domain YPTB3326 IPR010810 Flagellin hook, IN motif YPTB3326 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPTB3326 IPR001492 Flagellin YPTB3327 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB3327 IPR039420 Transcriptional regulatory protein WalR-like YPTB3327 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB3327 IPR040970 CadC C-terminal domain 1 YPTB3327 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3327 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3331 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3331 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB3331 IPR002371 Flagellar hook-associated protein 1 YPTB3333 IPR001782 Flagellar P-ring protein YPTB3334 IPR000527 Flagellar L-ring protein YPTB3335 IPR019776 Flagellar basal body rod protein, conserved site YPTB3335 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3335 IPR012834 Flagellar basal-body rod FlgG YPTB3335 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB3335 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB3335 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB3336 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB3336 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB3336 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3336 IPR019776 Flagellar basal body rod protein, conserved site YPTB3336 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB3337 IPR011491 Flagellar hook protein FlgE YPTB3337 IPR037058 Flagellar hook protein FlgE superfamily YPTB3337 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3337 IPR019776 Flagellar basal body rod protein, conserved site YPTB3337 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTB3337 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB3337 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTB3338 IPR025963 FlgD Tudor-like domain YPTB3338 IPR005648 Flagellar hook capping protein YPTB3338 IPR025965 FlgD Ig-like domain YPTB3339 IPR019776 Flagellar basal body rod protein, conserved site YPTB3339 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3339 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTB3339 IPR006299 Flagellar basal-body rod protein FlgC YPTB3340 IPR019776 Flagellar basal body rod protein, conserved site YPTB3340 IPR001444 Flagellar basal body rod protein, N-terminal YPTB3340 IPR006300 Flagellar basal-body rod protein FlgB YPTB3341 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTB3341 IPR039246 Flagellar protein FlgA YPTB3341 IPR013974 SAF domain YPTB3345 IPR003593 AAA+ ATPase domain YPTB3345 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB3345 IPR005714 ATPase, type III secretion system, FliI/YscN YPTB3345 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTB3345 IPR040627 T3SS EscN ATPase, C-terminal YPTB3345 IPR020005 Flagellar export ATPase FliI, clade 1 YPTB3345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3345 IPR032463 ATPase, type III secretion system, FliI YPTB3348 IPR006182 Secretory protein YscJ/FliF YPTB3348 IPR000067 Flagellar M-ring protein FliF YPTB3348 IPR013556 Flagellar M-ring C-terminal YPTB3349 IPR001624 Flagellar hook-basal body complex protein FliE YPTB3350 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTB3350 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTB3350 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTB3350 IPR003593 AAA+ ATPase domain YPTB3350 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3350 IPR025944 Sigma-54 interaction domain, conserved site YPTB3350 IPR002197 DNA binding HTH domain, Fis-type YPTB3350 IPR009057 Homeobox-like domain superfamily YPTB3350 IPR001789 Signal transduction response regulator, receiver domain YPTB3350 IPR011006 CheY-like superfamily YPTB3352 IPR036429 SpoA-like superfamily YPTB3352 IPR001543 Surface presentation of antigen (SpoA) YPTB3352 IPR012826 Flagellar motor switch FliN YPTB3352 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTB3353 IPR005838 Type III secretion system inner membrane P protein YPTB3353 IPR005837 Flagellar transport protein FliP YPTB3354 IPR002191 Bacterial export protein family 3 YPTB3354 IPR006305 Flagellar biosynthesis protein FliQ YPTB3355 IPR002010 Type III secretion system inner membrane R protein YPTB3355 IPR006303 Flagellar biosynthesis protein FliR YPTB3356 IPR006135 Type III secretion system substrate exporter YPTB3356 IPR029025 Type III secretion system substrate exporter, C-terminal YPTB3356 IPR006136 Flagellar biosynthetic protein FlhB YPTB3357 IPR025505 FHIPEP conserved site YPTB3357 IPR006301 Flagellar biosynthesis protein FlhA YPTB3357 IPR042193 FHIPEP, domain 3 YPTB3357 IPR001712 Type III secretion system FHIPEP YPTB3357 IPR042194 FHIPEP, domain 1 YPTB3357 IPR042196 FHIPEP, domain 4 YPTB3360 IPR002491 ABC transporter periplasmic binding domain YPTB3361 IPR000259 Fimbrial-type adhesion domain YPTB3361 IPR036937 Fimbrial-type adhesion domain superfamily YPTB3361 IPR015303 Fimbrial adhesin F17-AG, lectin domain YPTB3361 IPR008966 Adhesion domain superfamily YPTB3362 IPR013783 Immunoglobulin-like fold YPTB3362 IPR018046 Pili assembly chaperone, conserved site YPTB3362 IPR008962 PapD-like superfamily YPTB3362 IPR016148 Pili assembly chaperone, C-terminal YPTB3362 IPR016147 Pili assembly chaperone, N-terminal YPTB3362 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB3362 IPR001829 Pili assembly chaperone, bacterial YPTB3363 IPR018030 Fimbrial membrane usher, conserved site YPTB3363 IPR000015 Outer membrane usher protein YPTB3363 IPR042186 Outer membrane usher protein FimD, plug domain YPTB3363 IPR025949 PapC-like, C-terminal domain YPTB3363 IPR037224 PapC, N-terminal domain superfamily YPTB3363 IPR025885 PapC, N-terminal domain YPTB3364 IPR000259 Fimbrial-type adhesion domain YPTB3364 IPR036937 Fimbrial-type adhesion domain superfamily YPTB3364 IPR008966 Adhesion domain superfamily YPTB3365 IPR001223 Glycoside hydrolase family 18, catalytic domain YPTB3365 IPR011583 Chitinase II YPTB3365 IPR001579 Glycoside hydrolase, chitinase active site YPTB3365 IPR017853 Glycoside hydrolase superfamily YPTB3366 IPR020879 N-acetylglucosamine-binding protein A YPTB3366 IPR014756 Immunoglobulin E-set YPTB3366 IPR041029 N-acetylglucosamine binding protein A domain 2 YPTB3366 IPR004302 Cellulose/chitin-binding protein, N-terminal YPTB3372 IPR001775 GspD/PilQ family YPTB3372 IPR032789 Pilus formation protein, N-terminal YPTB3372 IPR007055 BON domain YPTB3372 IPR004846 Type II/III secretion system YPTB3372 IPR014004 Transport-associated and nodulation domain, bacteria YPTB3375 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3375 IPR001482 Type II/IV secretion system protein YPTB3375 IPR022399 Helicase/secretion neighbourhood ATPase YPTB3382 IPR014170 TonB system transport protein ExbD type-1 YPTB3382 IPR003400 Biopolymer transport protein ExbD/TolR YPTB3383 IPR014164 TonB-system energizer ExbB type-1 YPTB3383 IPR002898 MotA/TolQ/ExbB proton channel YPTB3384 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3384 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB3384 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3384 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTB3384 IPR006233 Cystathionine beta-lyase, bacterial YPTB3385 IPR032816 SNARE associated Golgi protein YPTB3385 IPR032818 DedA family YPTB3386 IPR009057 Homeobox-like domain superfamily YPTB3386 IPR009594 Transcription regulator HTH, AraC, N-terminal YPTB3386 IPR018060 DNA binding HTH domain, AraC-type YPTB3387 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTB3387 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTB3388 IPR023210 NADP-dependent oxidoreductase domain YPTB3388 IPR018170 Aldo/keto reductase, conserved site YPTB3388 IPR020471 Aldo/keto reductase YPTB3388 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTB3389 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPTB3389 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPTB3389 IPR023404 Radical SAM, alpha/beta horseshoe YPTB3389 IPR022946 Uncharacterised protein family UPF0313 YPTB3389 IPR007197 Radical SAM YPTB3389 IPR020612 Methylthiotransferase, conserved site YPTB3389 IPR006638 Elp3/MiaB/NifB YPTB3390 IPR006311 Twin-arginine translocation pathway, signal sequence YPTB3390 IPR026589 Cell division protein FtsP YPTB3390 IPR008972 Cupredoxin YPTB3390 IPR011707 Multicopper oxidase, type 3 YPTB3390 IPR011706 Multicopper oxidase, type 2 YPTB3391 IPR002123 Phospholipid/glycerol acyltransferase YPTB3391 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPTB3392 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPTB3392 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPTB3392 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTB3392 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPTB3392 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPTB3392 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPTB3392 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPTB3393 IPR029039 Flavoprotein-like superfamily YPTB3393 IPR003680 Flavodoxin-like fold YPTB3394 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3394 IPR036390 Winged helix DNA-binding domain superfamily YPTB3394 IPR000847 Transcription regulator HTH, LysR YPTB3394 IPR005119 LysR, substrate-binding YPTB3395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3395 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPTB3395 IPR006171 TOPRIM domain YPTB3395 IPR001241 DNA topoisomerase, type IIA YPTB3395 IPR018522 DNA topoisomerase, type IIA, conserved site YPTB3395 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPTB3395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3395 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3395 IPR002288 DNA gyrase B subunit, C-terminal YPTB3395 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTB3395 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3395 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPTB3396 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTB3396 IPR029058 Alpha/Beta hydrolase fold YPTB3397 IPR029052 Metallo-dependent phosphatase-like YPTB3397 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPTB3397 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTB3398 IPR009659 Protein of unknown function DUF1249 YPTB3399 IPR004385 Nucleoside diphosphate pyrophosphatase YPTB3399 IPR000086 NUDIX hydrolase domain YPTB3399 IPR015797 NUDIX hydrolase-like domain superfamily YPTB3399 IPR020084 NUDIX hydrolase, conserved site YPTB3400 IPR003423 Outer membrane efflux protein YPTB3400 IPR010130 Type I secretion outer membrane protein, TolC YPTB3401 IPR009576 Biofilm formation YgiB YPTB3402 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPTB3402 IPR016185 Pre-ATP-grasp domain superfamily YPTB3403 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPTB3403 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type YPTB3404 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPTB3404 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTB3405 IPR007475 Ubiquinone biosynthesis accessory factor UbiK YPTB3406 IPR002293 Amino acid/polyamine transporter I YPTB3407 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB3407 IPR004821 Cytidyltransferase-like domain YPTB3407 IPR023030 Bifunctional protein HldE YPTB3407 IPR011913 RfaE bifunctional protein, domain I YPTB3407 IPR011914 RfaE bifunctional protein, domain II YPTB3407 IPR029056 Ribokinase-like YPTB3407 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB3407 IPR011611 Carbohydrate kinase PfkB YPTB3408 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme YPTB3408 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPTB3408 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPTB3409 IPR039013 Inorganic triphosphatase YgiF YPTB3409 IPR023577 CYTH domain YPTB3409 IPR007899 CHAD domain YPTB3409 IPR033469 CYTH-like domain superfamily YPTB3410 IPR016476 SH3 domain protein YPTB3410 IPR003646 SH3-like domain, bacterial-type YPTB3411 IPR003607 HD/PDEase domain YPTB3411 IPR002646 Poly A polymerase, head domain YPTB3411 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTB3411 IPR006674 HD domain YPTB3411 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPTB3412 IPR003824 Undecaprenyl-diphosphatase UppP YPTB3413 IPR006156 Dihydroneopterin aldolase YPTB3413 IPR006157 Dihydroneopterin aldolase/epimerase domain YPTB3414 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPTB3415 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPTB3415 IPR017861 Kae1/TsaD family YPTB3415 IPR000905 Gcp-like domain YPTB3415 IPR017860 Peptidase M22, conserved site YPTB3416 IPR001911 Ribosomal protein S21 YPTB3416 IPR038380 Ribosomal protein S21 superfamily YPTB3416 IPR018278 Ribosomal protein S21, conserved site YPTB3417 IPR002694 Zinc finger, CHC2-type YPTB3417 IPR036977 DNA Primase, CHC2-type zinc finger YPTB3417 IPR034151 Bacterial DnaG primase, TOPRIM domain YPTB3417 IPR030846 DNA primase DnaG, bacteria YPTB3417 IPR006295 DNA primase, DnaG YPTB3417 IPR013173 DNA primase DnaG, DnaB-binding domain YPTB3417 IPR019475 DNA primase, DnaB-helicase binding domain YPTB3417 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YPTB3417 IPR013264 DNA primase, catalytic core, N-terminal YPTB3417 IPR006171 TOPRIM domain YPTB3417 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTB3418 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPTB3418 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPTB3418 IPR007630 RNA polymerase sigma-70 region 4 YPTB3418 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3418 IPR028630 RNA polymerase sigma factor RpoD YPTB3418 IPR007627 RNA polymerase sigma-70 region 2 YPTB3418 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPTB3418 IPR009042 RNA polymerase sigma-70 region 1.2 YPTB3418 IPR000943 RNA polymerase sigma-70 YPTB3418 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTB3418 IPR013325 RNA polymerase sigma factor, region 2 YPTB3418 IPR014284 RNA polymerase sigma-70 like domain YPTB3418 IPR007624 RNA polymerase sigma-70 region 3 YPTB3418 IPR042189 Sigma-70 factor, region 1.1 superfamily YPTB3424 IPR036390 Winged helix DNA-binding domain superfamily YPTB3424 IPR005119 LysR, substrate-binding YPTB3424 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3424 IPR000847 Transcription regulator HTH, LysR YPTB3428 IPR035959 RutC-like superfamily YPTB3428 IPR006056 RidA family YPTB3428 IPR006175 YjgF/YER057c/UK114 family YPTB3428 IPR019897 RidA, conserved site YPTB3436 IPR005694 Efflux pump membrane protein YPTB3436 IPR030196 Multidrug resistance protein MdtN YPTB3436 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTB3437 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPTB3439 IPR026891 Fibronectin type III-like domain YPTB3439 IPR001764 Glycoside hydrolase, family 3, N-terminal YPTB3439 IPR013783 Immunoglobulin-like fold YPTB3439 IPR017853 Glycoside hydrolase superfamily YPTB3439 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPTB3439 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily YPTB3439 IPR019800 Glycoside hydrolase, family 3, active site YPTB3439 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPTB3441 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3441 IPR035906 MetI-like superfamily YPTB3442 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3442 IPR035906 MetI-like superfamily YPTB3443 IPR006059 Bacterial extracellular solute-binding protein YPTB3444 IPR000843 LacI-type HTH domain YPTB3444 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3444 IPR028082 Periplasmic binding protein-like I YPTB3445 IPR033432 Glycosyl hydrolase 36, catalytic domain YPTB3445 IPR012341 Six-hairpin glycosidase-like superfamily YPTB3445 IPR008928 Six-hairpin glycosidase superfamily YPTB3446 IPR003593 AAA+ ATPase domain YPTB3446 IPR003439 ABC transporter-like YPTB3446 IPR017871 ABC transporter, conserved site YPTB3446 IPR040582 MalK, OB fold domain YPTB3446 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3446 IPR005116 Transport-associated OB, type 1 YPTB3446 IPR008995 Molybdate/tungstate binding, C-terminal YPTB3455 IPR037891 Immunity protein Cdil-like superfamily YPTB3455 IPR009888 Immunity protein CdiI, Proteobacteria type YPTB3460 IPR024973 ESPR domain YPTB3460 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB3460 IPR025157 Hemagglutinin repeat YPTB3460 IPR012334 Pectin lyase fold YPTB3460 IPR011050 Pectin lyase fold/virulence factor YPTB3460 IPR006914 VENN motif-containing domain YPTB3460 IPR008638 Filamentous haemagglutinin, N-terminal YPTB3461 IPR005565 Haemolysin activator HlyB, C-terminal YPTB3461 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB3461 IPR034746 POTRA domain YPTB3461 IPR027282 Two partner secretion pathway transporter YPTB3461 IPR035251 ShlB, POTRA domain YPTB3462 IPR036465 von Willebrand factor A-like domain superfamily YPTB3462 IPR002035 von Willebrand factor, type A YPTB3462 IPR011392 Tellurite resistance, TerY YPTB3463 IPR003325 TerD domain YPTB3465 IPR036465 von Willebrand factor A-like domain superfamily YPTB3465 IPR011392 Tellurite resistance, TerY YPTB3465 IPR002035 von Willebrand factor, type A YPTB3468 IPR005325 Protein of unknown function DUF308, membrane YPTB3469 IPR013785 Aldolase-type TIM barrel YPTB3469 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3469 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTB3469 IPR023753 FAD/NAD(P)-binding domain YPTB3470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3470 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB3470 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPTB3470 IPR007848 Methyltransferase small domain YPTB3471 IPR006315 Outer membrane autotransporter barrel YPTB3471 IPR036709 Autotransporter beta-domain superfamily YPTB3471 IPR011050 Pectin lyase fold/virulence factor YPTB3471 IPR005546 Autotransporter beta-domain YPTB3472 IPR002725 Protein of unknown function DUF45 YPTB3473 IPR036291 NAD(P)-binding domain superfamily YPTB3473 IPR000683 Oxidoreductase, N-terminal YPTB3474 IPR023025 Serine/threonine transporter SstT YPTB3474 IPR036458 Sodium:dicarboxylate symporter superfamily YPTB3474 IPR001991 Sodium:dicarboxylate symporter YPTB3475 IPR026267 Inner membrane protein YgjV YPTB3475 IPR019629 Uncharacterised protein family HI1736/YgjV YPTB3476 IPR007392 D-galactarate/Altronate dehydratase, C-terminal YPTB3476 IPR013974 SAF domain YPTB3477 IPR023668 Altronate oxidoreductase YPTB3477 IPR036291 NAD(P)-binding domain superfamily YPTB3477 IPR013131 Mannitol dehydrogenase, N-terminal YPTB3477 IPR013118 Mannitol dehydrogenase, C-terminal YPTB3477 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB3477 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB3478 IPR032466 Metal-dependent hydrolase YPTB3478 IPR003766 Uronate isomerase YPTB3479 IPR020846 Major facilitator superfamily domain YPTB3479 IPR036259 MFS transporter superfamily YPTB3479 IPR011701 Major facilitator superfamily YPTB3480 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3480 IPR011711 GntR, C-terminal YPTB3480 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTB3480 IPR000524 Transcription regulator HTH, GntR YPTB3480 IPR036390 Winged helix DNA-binding domain superfamily YPTB3482 IPR032818 DedA family YPTB3482 IPR032816 SNARE associated Golgi protein YPTB3483 IPR026574 Modulator protein MzrA YPTB3483 IPR027398 SecD export protein N-terminal TM domain YPTB3485 IPR010279 Inner membrane protein YqjD/ElaB YPTB3486 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPTB3488 IPR032808 DoxX family YPTB3489 IPR016639 Glutathione S-transferase Omega/GSH YPTB3489 IPR040079 Glutathione Transferase family YPTB3489 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTB3489 IPR010987 Glutathione S-transferase, C-terminal-like YPTB3489 IPR036249 Thioredoxin-like superfamily YPTB3489 IPR004045 Glutathione S-transferase, N-terminal YPTB3490 IPR005119 LysR, substrate-binding YPTB3490 IPR000847 Transcription regulator HTH, LysR YPTB3490 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3490 IPR036390 Winged helix DNA-binding domain superfamily YPTB3491 IPR012093 Pirin YPTB3491 IPR014710 RmlC-like jelly roll fold YPTB3491 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPTB3491 IPR003829 Pirin, N-terminal domain YPTB3491 IPR011051 RmlC-like cupin domain superfamily YPTB3492 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPTB3492 IPR008189 rRNA small subunit methyltransferase I YPTB3492 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTB3492 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTB3492 IPR035996 Tetrapyrrole methylase superfamily YPTB3492 IPR000878 Tetrapyrrole methylase YPTB3493 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB3493 IPR028082 Periplasmic binding protein-like I YPTB3493 IPR007443 Penicillin-binding protein activator LpoA YPTB3494 IPR011856 tRNA endonuclease-like domain superfamily YPTB3494 IPR011335 Restriction endonuclease type II-like YPTB3494 IPR003509 Uncharacterised protein family UPF0102 YPTB3495 IPR023070 DnaA initiator-associating protein YPTB3495 IPR001347 Sugar isomerase (SIS) YPTB3495 IPR035461 GmhA/DiaA YPTB3496 IPR014004 Transport-associated and nodulation domain, bacteria YPTB3496 IPR007055 BON domain YPTB3497 IPR011812 Biosynthetic peptidoglycan transglycosylase YPTB3497 IPR036950 Penicillin binding protein transglycosylase domain YPTB3497 IPR023346 Lysozyme-like domain superfamily YPTB3497 IPR001264 Glycosyl transferase, family 51 YPTB3498 IPR029062 Class I glutamine amidotransferase-like YPTB3498 IPR026041 Glyoxalase ElbB YPTB3500 IPR013767 PAS fold YPTB3500 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily YPTB3500 IPR011006 CheY-like superfamily YPTB3500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB3500 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3500 IPR005467 Histidine kinase domain YPTB3500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB3500 IPR040642 Histidine kinase receptor ArcB, transmembrane domain YPTB3500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB3500 IPR000014 PAS domain YPTB3500 IPR001789 Signal transduction response regulator, receiver domain YPTB3500 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPTB3500 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTB3500 IPR000700 PAS-associated, C-terminal YPTB3500 IPR036641 HPT domain superfamily YPTB3500 IPR035965 PAS domain superfamily YPTB3501 IPR007197 Radical SAM YPTB3501 IPR032432 Radical SAM, C-terminal extension YPTB3501 IPR006638 Elp3/MiaB/NifB YPTB3501 IPR039661 ELP3/YhcC YPTB3501 IPR023404 Radical SAM, alpha/beta horseshoe YPTB3501 IPR005911 Protein YhcC-like YPTB3502 IPR006982 Glutamate synthase, central-N YPTB3502 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB3502 IPR002932 Glutamate synthase domain YPTB3502 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily YPTB3502 IPR013785 Aldolase-type TIM barrel YPTB3502 IPR017932 Glutamine amidotransferase type 2 domain YPTB3502 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPTB3503 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB3503 IPR028261 Dihydroprymidine dehydrogenase domain II YPTB3503 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPTB3503 IPR023753 FAD/NAD(P)-binding domain YPTB3503 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3503 IPR009051 Alpha-helical ferredoxin YPTB3505 IPR036760 SspB-like superfamily YPTB3505 IPR007481 Stringent starvation protein B YPTB3506 IPR010987 Glutathione S-transferase, C-terminal-like YPTB3506 IPR036249 Thioredoxin-like superfamily YPTB3506 IPR040079 Glutathione Transferase family YPTB3506 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTB3506 IPR004046 Glutathione S-transferase, C-terminal YPTB3506 IPR004045 Glutathione S-transferase, N-terminal YPTB3506 IPR034341 Stringent starvation protein A, N-terminal YPTB3507 IPR020574 Ribosomal protein S9, conserved site YPTB3507 IPR023035 Ribosomal protein S9, bacterial/plastid YPTB3507 IPR000754 Ribosomal protein S9 YPTB3507 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3507 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3508 IPR005823 Ribosomal protein L13, bacterial-type YPTB3508 IPR023563 Ribosomal protein L13, conserved site YPTB3508 IPR005822 Ribosomal protein L13 YPTB3508 IPR036899 Ribosomal protein L13 superfamily YPTB3509 IPR005654 ATPase, AFG1-like YPTB3509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3509 IPR030870 Cell division protein ZapE YPTB3510 IPR009386 Protein of unknown function DUF1043 YPTB3511 IPR001940 Peptidase S1C YPTB3511 IPR009003 Peptidase S1, PA clan YPTB3511 IPR011782 Peptidase S1C, Do YPTB3511 IPR036034 PDZ superfamily YPTB3511 IPR001478 PDZ domain YPTB3512 IPR001940 Peptidase S1C YPTB3512 IPR011783 Peptidase S1C, DegS YPTB3512 IPR009003 Peptidase S1, PA clan YPTB3512 IPR001478 PDZ domain YPTB3512 IPR036034 PDZ superfamily YPTB3513 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPTB3513 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPTB3513 IPR036968 Enolpyruvate transferase domain superfamily YPTB3513 IPR001986 Enolpyruvate transferase domain YPTB3514 IPR002634 BolA protein YPTB3514 IPR036065 BolA-like superfamily YPTB3515 IPR036513 STAS domain superfamily YPTB3515 IPR002645 STAS domain YPTB3516 IPR042245 Tgt2/MlaC superfamily YPTB3516 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPTB3517 IPR003399 Mce/MlaD YPTB3517 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD YPTB3518 IPR030802 ABC transporter permease MalE YPTB3518 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPTB3519 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl YPTB3519 IPR017871 ABC transporter, conserved site YPTB3519 IPR003439 ABC transporter-like YPTB3519 IPR003593 AAA+ ATPase domain YPTB3519 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3520 IPR004481 Sodium/potassium/calcium exchanger YPTB3520 IPR004837 Sodium/calcium exchanger membrane region YPTB3521 IPR000644 CBS domain YPTB3521 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPTB3521 IPR001347 Sugar isomerase (SIS) YPTB3521 IPR035474 KpsF-like, SIS domain YPTB3522 IPR010023 KdsC family YPTB3522 IPR023214 HAD superfamily YPTB3522 IPR036412 HAD-like superfamily YPTB3523 IPR010664 Lipopolysaccharide assembly, LptC-related YPTB3523 IPR026265 Lipopolysaccharide export system protein LptC YPTB3524 IPR014340 Lipopolysaccharide export system protein LptA YPTB3524 IPR005653 Organic solvent tolerance-like, N-terminal YPTB3525 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTB3525 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3525 IPR003439 ABC transporter-like YPTB3525 IPR017871 ABC transporter, conserved site YPTB3525 IPR003593 AAA+ ATPase domain YPTB3525 IPR030921 LPS export ABC transporter, ATP-binding protein LptB YPTB3526 IPR007046 RNA polymerase sigma factor 54, core-binding domain YPTB3526 IPR000394 RNA polymerase sigma factor 54 YPTB3526 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily YPTB3526 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPTB3527 IPR036567 Ribosome hibernation promotion factor-like YPTB3527 IPR003489 Ribosome hibernation promoting factor/RaiA YPTB3528 IPR016152 Phosphotransferase/anion transporter YPTB3528 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPTB3528 IPR002178 PTS EIIA type-2 domain YPTB3529 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3529 IPR005337 RapZ-like family YPTB3530 IPR000032 Phosphocarrier protein HPr-like YPTB3530 IPR035895 HPr-like superfamily YPTB3530 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTB3530 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTB3531 IPR002082 Aspartate carbamoyltransferase YPTB3531 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPTB3531 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPTB3531 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPTB3531 IPR006130 Aspartate/ornithine carbamoyltransferase YPTB3532 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YPTB3532 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily YPTB3532 IPR002801 Aspartate transcarbamylase regulatory subunit YPTB3532 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTB3532 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPTB3533 IPR035959 RutC-like superfamily YPTB3533 IPR019897 RidA, conserved site YPTB3533 IPR006056 RidA family YPTB3533 IPR006175 YjgF/YER057c/UK114 family YPTB3535 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3535 IPR028082 Periplasmic binding protein-like I YPTB3535 IPR012771 Trehalose operon repressor YPTB3535 IPR000843 LacI-type HTH domain YPTB3536 IPR003352 Phosphotransferase system, EIIC YPTB3536 IPR036878 Glucose permease domain IIB YPTB3536 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTB3536 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTB3536 IPR001996 Phosphotransferase system, IIB component, type 1 YPTB3536 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPTB3536 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPTB3537 IPR013780 Glycosyl hydrolase, all-beta YPTB3537 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTB3537 IPR017853 Glycoside hydrolase superfamily YPTB3537 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPTB3537 IPR012769 Trehalose-6-phosphate hydrolase YPTB3538 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTB3538 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPTB3538 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTB3538 IPR023459 Transcription elongation factor GreA/GreB family YPTB3538 IPR028625 Regulator of nucleoside diphosphate kinase YPTB3539 IPR010980 Cytochrome c/b562 YPTB3539 IPR009155 Cytochrome b562 YPTB3541 IPR002510 Metalloprotease TldD/PmbA YPTB3541 IPR036059 Metalloprotease TldD/PmbA superfamily YPTB3541 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPTB3542 IPR023153 PSPTO4464-like domain superfamily YPTB3542 IPR006839 Ribosome-associated, YjgA YPTB3543 IPR000468 Barstar (barnase inhibitor) YPTB3543 IPR035905 Barstar-like superfamily YPTB3545 IPR016162 Aldehyde dehydrogenase, N-terminal YPTB3545 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTB3545 IPR016161 Aldehyde/histidinol dehydrogenase YPTB3545 IPR016163 Aldehyde dehydrogenase, C-terminal YPTB3545 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTB3545 IPR015590 Aldehyde dehydrogenase domain YPTB3545 IPR010102 Succinate semialdehyde dehydrogenase YPTB3546 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPTB3546 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPTB3547 IPR006143 RND efflux pump, membrane fusion protein YPTB3547 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTB3547 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPTB3548 IPR012451 Protein of unknown function DUF1656 YPTB3549 IPR000847 Transcription regulator HTH, LysR YPTB3549 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3549 IPR036390 Winged helix DNA-binding domain superfamily YPTB3549 IPR005119 LysR, substrate-binding YPTB3550 IPR000847 Transcription regulator HTH, LysR YPTB3550 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3550 IPR036390 Winged helix DNA-binding domain superfamily YPTB3550 IPR005119 LysR, substrate-binding YPTB3552 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain YPTB3552 IPR041079 Neuraminidase-like domain YPTB3553 IPR003284 Salmonella virulence plasmid 65kDa B protein YPTB3553 IPR022045 Insecticide toxin TcdB middle/N-terminal YPTB3553 IPR022044 Insecticide toxin TcdB middle/C-terminal YPTB3557 IPR025968 YwqJ-like deaminase YPTB3557 IPR041508 Toxin complex C-like repeat YPTB3557 IPR022385 Rhs repeat-associated core YPTB3558 IPR002510 Metalloprotease TldD/PmbA YPTB3558 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPTB3558 IPR036059 Metalloprotease TldD/PmbA superfamily YPTB3558 IPR025502 TldD YPTB3559 IPR036526 Carbon-nitrogen hydrolase superfamily YPTB3559 IPR003010 Carbon-nitrogen hydrolase YPTB3559 IPR001110 Uncharacterised protein family UPF0012, conserved site YPTB3560 IPR011836 Conserved hypothetical protein CHP02099 YPTB3560 IPR025263 Domain of unknown function DUF3971 YPTB3560 IPR032712 AsmA-like, C-terminal YPTB3561 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPTB3561 IPR003029 S1 domain YPTB3561 IPR012340 Nucleic acid-binding, OB-fold YPTB3561 IPR022967 RNA-binding domain, S1 YPTB3561 IPR004659 Ribonuclease E/G YPTB3562 IPR029001 Inosine triphosphate pyrophosphatase-like YPTB3562 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPTB3563 IPR007227 Cell shape-determining protein MreD YPTB3563 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPTB3564 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 YPTB3564 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 YPTB3564 IPR007221 Rod shape-determining protein MreC YPTB3565 IPR004753 Cell shape determining protein MreB YPTB3566 IPR029787 Nucleotide cyclase YPTB3566 IPR001633 EAL domain YPTB3566 IPR035919 EAL domain superfamily YPTB3566 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPTB3566 IPR000160 GGDEF domain YPTB3567 IPR014188 Acrylyl-CoA reductase AcuI YPTB3567 IPR013149 Alcohol dehydrogenase, C-terminal YPTB3567 IPR036291 NAD(P)-binding domain superfamily YPTB3567 IPR013154 Alcohol dehydrogenase, N-terminal YPTB3567 IPR011032 GroES-like superfamily YPTB3567 IPR020843 Polyketide synthase, enoylreductase domain YPTB3568 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily YPTB3568 IPR000572 Oxidoreductase, molybdopterin-binding domain YPTB3568 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP YPTB3569 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ YPTB3569 IPR013130 Ferric reductase transmembrane component-like domain YPTB3570 IPR036441 Dehydroquinase, class II superfamily YPTB3570 IPR018509 Dehydroquinase, class II, conserved site YPTB3570 IPR001874 Dehydroquinase, class II YPTB3571 IPR011053 Single hybrid motif YPTB3571 IPR001249 Acetyl-CoA biotin carboxyl carrier YPTB3571 IPR001882 Biotin-binding site YPTB3571 IPR000089 Biotin/lipoyl attachment YPTB3572 IPR011764 Biotin carboxylation domain YPTB3572 IPR005481 Biotin carboxylase-like, N-terminal domain YPTB3572 IPR013815 ATP-grasp fold, subdomain 1 YPTB3572 IPR011761 ATP-grasp fold YPTB3572 IPR016185 Pre-ATP-grasp domain superfamily YPTB3572 IPR011054 Rudiment single hybrid motif YPTB3572 IPR005482 Biotin carboxylase, C-terminal YPTB3572 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPTB3572 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPTB3573 IPR010398 Protein of unknown function DUF997 YPTB3574 IPR018212 Sodium/solute symporter, conserved site YPTB3574 IPR011849 Sodium/pantothenate symporter YPTB3574 IPR038377 Sodium/glucose symporter superfamily YPTB3574 IPR001734 Sodium/solute symporter YPTB3575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3575 IPR004498 Ribosomal protein L11 methyltransferase YPTB3576 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPTB3576 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPTB3576 IPR032887 tRNA-dihydrouridine synthase B YPTB3576 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTB3576 IPR035587 DUS-like, FMN-binding domain YPTB3576 IPR013785 Aldolase-type TIM barrel YPTB3576 IPR001269 tRNA-dihydrouridine synthase YPTB3577 IPR002197 DNA binding HTH domain, Fis-type YPTB3577 IPR009057 Homeobox-like domain superfamily YPTB3577 IPR005412 DNA-binding protein Fis YPTB3580 IPR011701 Major facilitator superfamily YPTB3580 IPR036259 MFS transporter superfamily YPTB3580 IPR020846 Major facilitator superfamily domain YPTB3580 IPR005829 Sugar transporter, conserved site YPTB3580 IPR004736 MFS transporter, metabolite:H symporter YPTB3581 IPR029032 AhpD-like YPTB3581 IPR012788 4-carboxymuconolactone decarboxylase YPTB3581 IPR003779 Carboxymuconolactone decarboxylase-like YPTB3582 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPTB3582 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPTB3582 IPR015815 3-hydroxyisobutyrate dehydrogenase-related YPTB3582 IPR036291 NAD(P)-binding domain superfamily YPTB3582 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPTB3582 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB3582 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB3583 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTB3583 IPR001279 Metallo-beta-lactamase YPTB3584 IPR008816 Glycine zipper 2TM domain YPTB3585 IPR012340 Nucleic acid-binding, OB-fold YPTB3585 IPR012156 Cold shock, CspA YPTB3585 IPR011129 Cold shock domain YPTB3585 IPR019844 Cold-shock (CSD) domain YPTB3585 IPR002059 Cold-shock protein, DNA-binding YPTB3586 IPR011129 Cold shock domain YPTB3586 IPR012340 Nucleic acid-binding, OB-fold YPTB3586 IPR012156 Cold shock, CspA YPTB3586 IPR019844 Cold-shock (CSD) domain YPTB3586 IPR002059 Cold-shock protein, DNA-binding YPTB3587 IPR012156 Cold shock, CspA YPTB3587 IPR012340 Nucleic acid-binding, OB-fold YPTB3587 IPR019844 Cold-shock (CSD) domain YPTB3587 IPR002059 Cold-shock protein, DNA-binding YPTB3587 IPR011129 Cold shock domain YPTB3590 IPR036249 Thioredoxin-like superfamily YPTB3590 IPR004045 Glutathione S-transferase, N-terminal YPTB3590 IPR040079 Glutathione Transferase family YPTB3590 IPR010987 Glutathione S-transferase, C-terminal-like YPTB3590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTB3591 IPR001347 Sugar isomerase (SIS) YPTB3591 IPR035474 KpsF-like, SIS domain YPTB3591 IPR000644 CBS domain YPTB3591 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPTB3592 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB3592 IPR000577 Carbohydrate kinase, FGGY YPTB3592 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB3592 IPR005929 Ribulokinase YPTB3594 IPR001851 ABC transporter, permease YPTB3595 IPR003593 AAA+ ATPase domain YPTB3595 IPR003439 ABC transporter-like YPTB3595 IPR017871 ABC transporter, conserved site YPTB3595 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3595 IPR015861 ABC transporter, ribose import, RbsA YPTB3597 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTB3597 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPTB3597 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP YPTB3599 IPR038770 Sodium/solute symporter superfamily YPTB3599 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPTB3599 IPR006153 Cation/H+ exchanger YPTB3599 IPR018422 Cation/H+ exchanger, CPA1 family YPTB3600 IPR006043 Xanthine/uracil/vitamin C permease YPTB3601 IPR026262 Antitoxin DinJ YPTB3601 IPR007337 RelB antitoxin/Antitoxin DinJ YPTB3601 IPR013321 Arc-type ribbon-helix-helix YPTB3602 IPR017871 ABC transporter, conserved site YPTB3602 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3602 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB YPTB3602 IPR003439 ABC transporter-like YPTB3602 IPR003593 AAA+ ATPase domain YPTB3603 IPR035906 MetI-like superfamily YPTB3603 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3604 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPTB3604 IPR036661 Luciferase-like domain superfamily YPTB3604 IPR011251 Luciferase-like domain YPTB3605 IPR015168 SsuA/THI5-like YPTB3605 IPR010067 Aliphatic sulfonates-binding protein YPTB3605 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB3606 IPR005025 NADPH-dependent FMN reductase-like YPTB3606 IPR029039 Flavoprotein-like superfamily YPTB3606 IPR020048 NADPH-dependent FMN reductase, SsuE YPTB3608 IPR002139 Ribokinase/fructokinase YPTB3608 IPR011611 Carbohydrate kinase PfkB YPTB3608 IPR011877 Ribokinase YPTB3608 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB3608 IPR029056 Ribokinase-like YPTB3609 IPR023064 D-ribose pyranase YPTB3609 IPR023750 RbsD-like superfamily YPTB3609 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPTB3610 IPR018060 DNA binding HTH domain, AraC-type YPTB3610 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTB3610 IPR009057 Homeobox-like domain superfamily YPTB3610 IPR037923 Transcription regulator HTH-like YPTB3610 IPR018062 HTH domain AraC-type, conserved site YPTB3611 IPR004104 Oxidoreductase, C-terminal YPTB3611 IPR036291 NAD(P)-binding domain superfamily YPTB3611 IPR000683 Oxidoreductase, N-terminal YPTB3613 IPR006531 Gp5 N-terminal YPTB3613 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB3613 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB3613 IPR037026 Vgr protein, OB-fold domain superfamily YPTB3615 IPR031325 RHS repeat YPTB3615 IPR022385 Rhs repeat-associated core YPTB3615 IPR001826 RHS protein YPTB3615 IPR006530 YD repeat YPTB3617 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB3617 IPR037026 Vgr protein, OB-fold domain superfamily YPTB3617 IPR006531 Gp5 N-terminal YPTB3617 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB3621 IPR025479 Domain of unknown function DUF4329 YPTB3621 IPR001826 RHS protein YPTB3621 IPR006530 YD repeat YPTB3621 IPR022385 Rhs repeat-associated core YPTB3621 IPR031325 RHS repeat YPTB3623 IPR006531 Gp5 N-terminal YPTB3623 IPR037026 Vgr protein, OB-fold domain superfamily YPTB3623 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTB3623 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTB3629 IPR004176 Clp, N-terminal YPTB3629 IPR019489 Clp ATPase, C-terminal YPTB3629 IPR018368 ClpA/B, conserved site 1 YPTB3629 IPR017729 Type VI secretion system, ATPase ClpV1 YPTB3629 IPR003959 ATPase, AAA-type, core YPTB3629 IPR003593 AAA+ ATPase domain YPTB3629 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3629 IPR041546 ClpA/ClpB, AAA lid domain YPTB3629 IPR036628 Clp, N-terminal domain superfamily YPTB3629 IPR001270 ClpA/B family YPTB3639 IPR008514 Type VI secretion system effector, Hcp YPTB3639 IPR036624 Hcp1-like superfamily YPTB3641 IPR010794 Maltose operon periplasmic YPTB3642 IPR036998 Porin, LamB-type superfamily YPTB3642 IPR003192 Porin, LamB-type YPTB3642 IPR023738 Maltoporin YPTB3643 IPR003439 ABC transporter-like YPTB3643 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3643 IPR040582 MalK, OB fold domain YPTB3643 IPR008995 Molybdate/tungstate binding, C-terminal YPTB3643 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTB3643 IPR017871 ABC transporter, conserved site YPTB3643 IPR003593 AAA+ ATPase domain YPTB3645 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPTB3645 IPR006061 Solute-binding family 1, conserved site YPTB3645 IPR006059 Bacterial extracellular solute-binding protein YPTB3646 IPR035906 MetI-like superfamily YPTB3646 IPR029345 Maltose transport system permease protein MalF, P2 domain YPTB3646 IPR035277 MalF, N-terminal YPTB3646 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like YPTB3646 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3647 IPR035906 MetI-like superfamily YPTB3647 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3648 IPR020948 Phosphate-starvation-induced PsiE-like YPTB3648 IPR009315 Phosphate-starvation-induced PsiE YPTB3649 IPR023096 Phosphoglucose isomerase, C-terminal YPTB3649 IPR035482 Phosphoglucose isomerase, SIS domain 2 YPTB3649 IPR001672 Phosphoglucose isomerase (PGI) YPTB3649 IPR018189 Phosphoglucose isomerase, conserved site YPTB3649 IPR035476 Phosphoglucose isomerase, SIS domain 1 YPTB3650 IPR002912 ACT domain YPTB3650 IPR036393 Acetylglutamate kinase-like superfamily YPTB3650 IPR001048 Aspartate/glutamate/uridylate kinase YPTB3650 IPR005260 Aspartate kinase, monofunctional class YPTB3650 IPR001341 Aspartate kinase YPTB3650 IPR018042 Aspartate kinase, conserved site YPTB3650 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain YPTB3652 IPR008638 Filamentous haemagglutinin, N-terminal YPTB3652 IPR025157 Hemagglutinin repeat YPTB3652 IPR012334 Pectin lyase fold YPTB3652 IPR011050 Pectin lyase fold/virulence factor YPTB3653 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily YPTB3653 IPR006158 Cobalamin (vitamin B12)-binding domain YPTB3653 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTB3653 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPTB3653 IPR000489 Pterin-binding domain YPTB3653 IPR011822 Cobalamin-dependent methionine synthase YPTB3653 IPR033706 Methionine synthase, B12-binding domain YPTB3653 IPR036594 Methionine synthase domain YPTB3653 IPR003726 Homocysteine-binding domain YPTB3653 IPR011005 Dihydropteroate synthase-like YPTB3653 IPR036724 Cobalamin-binding domain superfamily YPTB3653 IPR036589 Homocysteine-binding domain superfamily YPTB3654 IPR005471 Transcription regulator IclR, N-terminal YPTB3654 IPR029016 GAF-like domain superfamily YPTB3654 IPR036390 Winged helix DNA-binding domain superfamily YPTB3654 IPR014757 Transcription regulator IclR, C-terminal YPTB3654 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3655 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPTB3656 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPTB3656 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTB3656 IPR006254 Isocitrate lyase YPTB3656 IPR039556 ICL/PEPM domain YPTB3656 IPR040442 Pyruvate kinase-like domain superfamily YPTB3657 IPR011076 Malate synthase-like superfamily YPTB3657 IPR006252 Malate synthase A YPTB3657 IPR001465 Malate synthase YPTB3657 IPR019830 Malate synthase, conserved site YPTB3658 IPR005697 Homoserine O-succinyltransferase MetA YPTB3658 IPR033752 MetA family YPTB3658 IPR029062 Class I glutamine amidotransferase-like YPTB3659 IPR001451 Hexapeptide repeat YPTB3659 IPR011004 Trimeric LpxA-like superfamily YPTB3660 IPR041121 SDH, C-terminal YPTB3660 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTB3660 IPR036291 NAD(P)-binding domain superfamily YPTB3660 IPR022893 Shikimate dehydrogenase family YPTB3660 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPTB3660 IPR011342 Shikimate dehydrogenase YPTB3661 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTB3661 IPR006070 YrdC-like domain YPTB3661 IPR023535 Threonylcarbamoyl-AMP synthase YPTB3662 IPR000380 DNA topoisomerase, type IA YPTB3662 IPR013498 DNA topoisomerase, type IA, zn finger YPTB3663 IPR007456 Smg YPTB3664 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3664 IPR041614 DprA, winged helix domain YPTB3664 IPR003488 DNA recombination-mediator protein A YPTB3665 IPR036821 Peptide deformylase superfamily YPTB3665 IPR023635 Peptide deformylase YPTB3666 IPR002376 Formyl transferase, N-terminal YPTB3666 IPR037022 Formyl transferase, C-terminal domain superfamily YPTB3666 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain YPTB3666 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPTB3666 IPR005793 Formyl transferase, C-terminal YPTB3666 IPR005794 Methionyl-tRNA formyltransferase YPTB3666 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPTB3666 IPR036477 Formyl transferase, N-terminal domain superfamily YPTB3667 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPTB3667 IPR006027 NusB/RsmB/TIM44 YPTB3667 IPR023267 RNA (C5-cytosine) methyltransferase YPTB3667 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type YPTB3667 IPR004573 rRNA small subunit methyltransferase B YPTB3667 IPR035926 NusB-like superfamily YPTB3667 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3667 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPTB3668 IPR006037 Regulator of K+ conductance, C-terminal YPTB3668 IPR003148 Regulator of K+ conductance, N-terminal YPTB3668 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTB3668 IPR036291 NAD(P)-binding domain superfamily YPTB3668 IPR006036 Potassium uptake protein TrkA YPTB3669 IPR036019 Gated mechanosensitive channel YPTB3669 IPR019823 Large-conductance mechanosensitive channel, conserved site YPTB3669 IPR001185 Large-conductance mechanosensitive channel YPTB3669 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L YPTB3670 IPR005589 Alternative ribosome-rescue factor A YPTB3671 IPR011788 Zn(II)-responsive transcriptional regulator YPTB3671 IPR000551 MerR-type HTH domain YPTB3671 IPR009061 Putative DNA-binding domain superfamily YPTB3672 IPR000456 Ribosomal protein L17 YPTB3672 IPR036373 Ribosomal protein L17 superfamily YPTB3673 IPR036643 DNA-directed RNA polymerase, insert domain superfamily YPTB3673 IPR011260 RNA polymerase, alpha subunit, C-terminal YPTB3673 IPR011773 DNA-directed RNA polymerase, alpha subunit YPTB3673 IPR036603 RNA polymerase, RBP11-like subunit YPTB3673 IPR011262 DNA-directed RNA polymerase, insert domain YPTB3673 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPTB3674 IPR005709 Ribosomal protein S4, bacterial-type YPTB3674 IPR018079 Ribosomal protein S4, conserved site YPTB3674 IPR002942 RNA-binding S4 domain YPTB3674 IPR036986 RNA-binding S4 domain superfamily YPTB3674 IPR022801 Ribosomal protein S4/S9 YPTB3674 IPR001912 Ribosomal protein S4/S9, N-terminal YPTB3675 IPR001971 Ribosomal protein S11 YPTB3675 IPR019981 Ribosomal protein S11, bacterial-type YPTB3675 IPR018102 Ribosomal S11, conserved site YPTB3675 IPR036967 Ribosomal protein S11 superfamily YPTB3676 IPR027437 30s ribosomal protein S13, C-terminal YPTB3676 IPR001892 Ribosomal protein S13 YPTB3676 IPR010979 Ribosomal protein S13-like, H2TH YPTB3676 IPR019980 Ribosomal protein S13, bacterial-type YPTB3676 IPR018269 Ribosomal protein S13, conserved site YPTB3677 IPR035977 Ribosomal protein L36 superfamily YPTB3677 IPR000473 Ribosomal protein L36 YPTB3678 IPR030659 SecY conserved site YPTB3678 IPR026593 Protein translocase subunit SecY YPTB3678 IPR002208 SecY/SEC61-alpha family YPTB3678 IPR023201 SecY domain superfamily YPTB3679 IPR001196 Ribosomal protein L15, conserved site YPTB3679 IPR021131 Ribosomal protein L18e/L15P YPTB3679 IPR036227 Ribosomal L18e/L15P superfamily YPTB3679 IPR030878 Ribosomal protein L15 YPTB3679 IPR005749 Ribosomal protein L15, bacterial-type YPTB3680 IPR018038 Ribosomal protein L30, conserved site YPTB3680 IPR005996 Ribosomal protein L30, bacterial-type YPTB3680 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily YPTB3680 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPTB3681 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPTB3681 IPR000851 Ribosomal protein S5 YPTB3681 IPR013810 Ribosomal protein S5, N-terminal YPTB3681 IPR005712 Ribosomal protein S5, bacterial-type YPTB3681 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3681 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3681 IPR005324 Ribosomal protein S5, C-terminal YPTB3682 IPR004389 Ribosomal protein L18, bacterial-type YPTB3682 IPR005484 Ribosomal protein L18 YPTB3683 IPR020040 Ribosomal protein L6, alpha-beta domain YPTB3683 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily YPTB3683 IPR019906 Ribosomal protein L6, bacterial-type YPTB3683 IPR002358 Ribosomal protein L6, conserved site YPTB3683 IPR000702 Ribosomal protein L6 YPTB3684 IPR035987 Ribosomal protein S8 superfamily YPTB3684 IPR000630 Ribosomal protein S8 YPTB3685 IPR018271 Ribosomal protein S14, conserved site YPTB3685 IPR001209 Ribosomal protein S14 YPTB3685 IPR023036 Ribosomal protein S14, bacterial/plastid YPTB3686 IPR020930 Ribosomal protein L5, bacterial-type YPTB3686 IPR022803 Ribosomal protein L5 domain superfamily YPTB3686 IPR031309 Ribosomal protein L5, C-terminal YPTB3686 IPR031310 Ribosomal protein L5, N-terminal YPTB3686 IPR002132 Ribosomal protein L5 YPTB3687 IPR005824 KOW YPTB3687 IPR041988 Ribosomal Protein L26/L24, KOW domain YPTB3687 IPR014722 Ribosomal protein L2, domain 2 YPTB3687 IPR003256 Ribosomal protein L24 YPTB3687 IPR005825 Ribosomal protein L24/L26, conserved site YPTB3687 IPR008991 Translation protein SH3-like domain superfamily YPTB3688 IPR019972 Ribosomal protein L14P, conserved site YPTB3688 IPR005745 Ribosomal protein L14P, bacterial-type YPTB3688 IPR036853 Ribosomal protein L14 superfamily YPTB3688 IPR000218 Ribosomal protein L14P YPTB3689 IPR019979 Ribosomal protein S17, conserved site YPTB3689 IPR000266 Ribosomal protein S17/S11 YPTB3689 IPR019984 30S ribosomal protein S17 YPTB3689 IPR012340 Nucleic acid-binding, OB-fold YPTB3690 IPR018254 Ribosomal protein L29, conserved site YPTB3690 IPR036049 Ribosomal protein L29/L35 superfamily YPTB3690 IPR001854 Ribosomal protein L29/L35 YPTB3691 IPR036920 Ribosomal protein L10e/L16 superfamily YPTB3691 IPR000114 Ribosomal protein L16 YPTB3691 IPR020798 Ribosomal protein L16, conserved site YPTB3691 IPR016180 Ribosomal protein L10e/L16 YPTB3692 IPR005704 Ribosomal protein S3, bacterial-type YPTB3692 IPR036419 Ribosomal protein S3, C-terminal domain superfamily YPTB3692 IPR001351 Ribosomal protein S3, C-terminal YPTB3692 IPR004087 K Homology domain YPTB3692 IPR015946 K homology domain-like, alpha/beta YPTB3692 IPR018280 Ribosomal protein S3, conserved site YPTB3692 IPR004044 K Homology domain, type 2 YPTB3692 IPR009019 K homology domain superfamily, prokaryotic type YPTB3693 IPR018260 Ribosomal protein L22/L17, conserved site YPTB3693 IPR001063 Ribosomal protein L22/L17 YPTB3693 IPR036394 Ribosomal protein L22/L17 superfamily YPTB3693 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPTB3694 IPR023575 Ribosomal protein S19, superfamily YPTB3694 IPR020934 Ribosomal protein S19 conserved site YPTB3694 IPR002222 Ribosomal protein S19/S15 YPTB3694 IPR005732 Ribosomal protein S19, bacterial-type YPTB3695 IPR022671 Ribosomal protein L2, conserved site YPTB3695 IPR022666 Ribosomal Proteins L2, RNA binding domain YPTB3695 IPR014722 Ribosomal protein L2, domain 2 YPTB3695 IPR012340 Nucleic acid-binding, OB-fold YPTB3695 IPR022669 Ribosomal protein L2, C-terminal YPTB3695 IPR002171 Ribosomal protein L2 YPTB3695 IPR014726 Ribosomal protein L2, domain 3 YPTB3695 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPTB3695 IPR008991 Translation protein SH3-like domain superfamily YPTB3696 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTB3696 IPR001014 Ribosomal protein L23/L25, conserved site YPTB3696 IPR013025 Ribosomal protein L25/L23 YPTB3696 IPR012678 Ribosomal protein L23/L15e core domain superfamily YPTB3697 IPR013005 50S ribosomal protein uL4 YPTB3697 IPR002136 Ribosomal protein L4/L1e YPTB3697 IPR023574 Ribosomal protein L4 domain superfamily YPTB3698 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPTB3698 IPR000597 Ribosomal protein L3 YPTB3698 IPR019926 Ribosomal protein L3, conserved site YPTB3698 IPR009000 Translation protein, beta-barrel domain superfamily YPTB3699 IPR018268 Ribosomal protein S10, conserved site YPTB3699 IPR027486 Ribosomal protein S10 domain YPTB3699 IPR001848 Ribosomal protein S10 YPTB3699 IPR036838 Ribosomal protein S10 domain superfamily YPTB3700 IPR008331 Ferritin/DPS protein domain YPTB3700 IPR009040 Ferritin-like diiron domain YPTB3700 IPR009078 Ferritin-like superfamily YPTB3700 IPR012347 Ferritin-like YPTB3700 IPR002024 Bacterioferritin YPTB3701 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTB3701 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB3702 IPR033720 Elongation factor Tu, domain 2 YPTB3702 IPR009000 Translation protein, beta-barrel domain superfamily YPTB3702 IPR000795 Transcription factor, GTP-binding domain YPTB3702 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTB3702 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPTB3702 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB3702 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPTB3702 IPR005225 Small GTP-binding protein domain YPTB3702 IPR031157 Tr-type G domain, conserved site YPTB3702 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB3702 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3703 IPR005517 Translation elongation factor EFG/EF2, domain IV YPTB3703 IPR031157 Tr-type G domain, conserved site YPTB3703 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3703 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3703 IPR000640 Elongation factor EFG, domain V-like YPTB3703 IPR035647 EF-G domain III/V-like YPTB3703 IPR009022 Elongation factor G, domain III YPTB3703 IPR035649 EFG, domain V YPTB3703 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3703 IPR005225 Small GTP-binding protein domain YPTB3703 IPR000795 Transcription factor, GTP-binding domain YPTB3703 IPR009000 Translation protein, beta-barrel domain superfamily YPTB3703 IPR004540 Translation elongation factor EFG/EF2 YPTB3703 IPR041095 Elongation Factor G, domain II YPTB3703 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB3704 IPR036823 Ribosomal protein S7 domain superfamily YPTB3704 IPR000235 Ribosomal protein S5/S7 YPTB3704 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPTB3704 IPR020606 Ribosomal protein S7, conserved site YPTB3704 IPR023798 Ribosomal protein S7 domain YPTB3705 IPR012340 Nucleic acid-binding, OB-fold YPTB3705 IPR006032 Ribosomal protein S12/S23 YPTB3705 IPR005679 Ribosomal protein S12, bacterial-type YPTB3706 IPR027396 DsrEFH-like YPTB3706 IPR023526 Sulphur relay, TusB YPTB3706 IPR007215 Sulphur relay, TusB/DsrH YPTB3707 IPR017462 Sulphur relay, TusC/DsrF YPTB3707 IPR037450 Sulphur relay, TusC YPTB3707 IPR003787 Sulphur relay, DsrE/F-like protein YPTB3707 IPR027396 DsrEFH-like YPTB3708 IPR017463 Sulphur relay, TusD/DsrE YPTB3708 IPR003787 Sulphur relay, DsrE/F-like protein YPTB3708 IPR027396 DsrEFH-like YPTB3709 IPR013559 YheO-like YPTB3709 IPR039445 Transcriptional regulator DauR-like, HTH domain YPTB3709 IPR039446 Transcriptional regulator DauR-like YPTB3710 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPTB3710 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPTB3710 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTB3711 IPR007236 SlyX YPTB3712 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTB3713 IPR012658 Conserved hypothetical protein CHP02443 YPTB3714 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPTB3714 IPR003148 Regulator of K+ conductance, N-terminal YPTB3714 IPR036291 NAD(P)-binding domain superfamily YPTB3714 IPR038770 Sodium/solute symporter superfamily YPTB3714 IPR004771 K+/H+ exchanger YPTB3714 IPR006153 Cation/H+ exchanger YPTB3715 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPTB3715 IPR029039 Flavoprotein-like superfamily YPTB3715 IPR003680 Flavodoxin-like fold YPTB3716 IPR003593 AAA+ ATPase domain YPTB3716 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3716 IPR017871 ABC transporter, conserved site YPTB3716 IPR003439 ABC transporter-like YPTB3716 IPR032781 ABC-transporter extension domain YPTB3717 IPR029044 Nucleotide-diphospho-sugar transferases YPTB3717 IPR001173 Glycosyltransferase 2-like YPTB3719 IPR042098 Taurine dioxygenase TauD-like superfamily YPTB3719 IPR003819 TauD/TfdA-like domain YPTB3720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3720 IPR035906 MetI-like superfamily YPTB3721 IPR003439 ABC transporter-like YPTB3721 IPR015859 ABC transporter, taurine import, TauD YPTB3721 IPR003593 AAA+ ATPase domain YPTB3721 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3721 IPR017871 ABC transporter, conserved site YPTB3722 IPR010068 Taurine ABC transporter, substrate-binding protein TauA YPTB3722 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB3722 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTB3723 IPR001123 Amino acid exporter protein, LeuE-type YPTB3724 IPR029058 Alpha/Beta hydrolase fold YPTB3724 IPR000073 Alpha/beta hydrolase fold-1 YPTB3724 IPR000952 AB hydrolase 4, conserved site YPTB3724 IPR012020 AB hydrolase 4 family YPTB3725 IPR036685 YehU-like superfamily YPTB3725 IPR010648 Uncharacterised protein family UPF0270 YPTB3726 IPR006082 Phosphoribulokinase YPTB3726 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3726 IPR006083 Phosphoribulokinase/uridine kinase YPTB3728 IPR003718 OsmC/Ohr family YPTB3728 IPR036102 OsmC/Ohr superfamily YPTB3728 IPR015946 K homology domain-like, alpha/beta YPTB3729 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3729 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPTB3729 IPR036390 Winged helix DNA-binding domain superfamily YPTB3729 IPR014710 RmlC-like jelly roll fold YPTB3729 IPR000595 Cyclic nucleotide-binding domain YPTB3729 IPR018488 Cyclic nucleotide-binding, conserved site YPTB3729 IPR018490 Cyclic nucleotide-binding-like YPTB3729 IPR012318 Crp-type HTH domain YPTB3730 IPR032692 Integral membrane protein YccS, N-terminal YPTB3730 IPR010020 Integral membrane protein, YccS/YhfK YPTB3731 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPTB3731 IPR004636 Acetylornithine/Succinylornithine transaminase family YPTB3731 IPR005814 Aminotransferase class-III YPTB3731 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3731 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTB3731 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3732 IPR029062 Class I glutamine amidotransferase-like YPTB3732 IPR017926 Glutamine amidotransferase YPTB3732 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPTB3733 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3733 IPR033186 Helicase HerA-like C-terminal YPTB3734 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPTB3734 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPTB3734 IPR029000 Cyclophilin-like domain superfamily YPTB3735 IPR036291 NAD(P)-binding domain superfamily YPTB3735 IPR019802 Glycoside hydrolase, family 4, conserved site YPTB3735 IPR001088 Glycoside hydrolase, family 4 YPTB3735 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPTB3735 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPTB3736 IPR028082 Periplasmic binding protein-like I YPTB3736 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3736 IPR000843 LacI-type HTH domain YPTB3738 IPR036259 MFS transporter superfamily YPTB3738 IPR023528 Major facilitator superfamily transporter, TsgA YPTB3738 IPR011701 Major facilitator superfamily YPTB3738 IPR020846 Major facilitator superfamily domain YPTB3739 IPR032466 Metal-dependent hydrolase YPTB3739 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTB3739 IPR013108 Amidohydrolase 3 YPTB3740 IPR007419 BFD-like [2Fe-2S]-binding domain YPTB3740 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3740 IPR023753 FAD/NAD(P)-binding domain YPTB3740 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal YPTB3740 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPTB3740 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPTB3740 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPTB3740 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPTB3740 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPTB3740 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPTB3740 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTB3741 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type YPTB3741 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPTB3741 IPR017881 Nitrite reductase (NADH) small subunit YPTB3742 IPR024002 Formate/nitrite transporter, conserved site YPTB3742 IPR023271 Aquaporin-like YPTB3742 IPR000292 Formate/nitrite transporter YPTB3743 IPR035996 Tetrapyrrole methylase superfamily YPTB3743 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTB3743 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTB3743 IPR006366 Uroporphyrin-III C-methyltransferase YPTB3743 IPR036291 NAD(P)-binding domain superfamily YPTB3743 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPTB3743 IPR000878 Tetrapyrrole methylase YPTB3743 IPR028281 Siroheme synthase, central domain YPTB3743 IPR019478 Sirohaem synthase, dimerisation domain YPTB3743 IPR006367 Sirohaem synthase, N-terminal YPTB3743 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPTB3743 IPR012409 Sirohaem synthase YPTB3744 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPTB3744 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB3744 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTB3744 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPTB3744 IPR002306 Tryptophan-tRNA ligase YPTB3745 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic YPTB3745 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB3745 IPR041492 Haloacid dehalogenase-like hydrolase YPTB3745 IPR006439 HAD hydrolase, subfamily IA YPTB3745 IPR036412 HAD-like superfamily YPTB3745 IPR037512 Phosphoglycolate phosphatase, prokaryotic YPTB3745 IPR023214 HAD superfamily YPTB3746 IPR011060 Ribulose-phosphate binding barrel YPTB3746 IPR000056 Ribulose-phosphate 3-epimerase-like YPTB3746 IPR026019 Ribulose-phosphate 3-epimerase YPTB3746 IPR013785 Aldolase-type TIM barrel YPTB3747 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3747 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB3747 IPR012263 Adenine modification methylase, M.EcoRV-type YPTB3747 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPTB3747 IPR023095 Adenine-specific methyltransferase, domain 2 YPTB3748 IPR036680 Sporulation-like domain superfamily YPTB3748 IPR007730 Sporulation-like domain YPTB3749 IPR030960 3-dehydroquinate synthase domain YPTB3749 IPR016037 3-dehydroquinate synthase AroB YPTB3749 IPR030963 3-dehydroquinate synthase family YPTB3750 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3750 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPTB3750 IPR023000 Shikimate kinase, conserved site YPTB3750 IPR031322 Shikimate kinase/gluconokinase YPTB3751 IPR001775 GspD/PilQ family YPTB3751 IPR004845 Type II secretion system GspD, conserved site YPTB3751 IPR005644 NolW-like YPTB3751 IPR038591 NolW-like superfamily YPTB3751 IPR013355 Type IV pilus secretin PilQ YPTB3751 IPR011662 Secretin/TonB, short N-terminal domain YPTB3751 IPR004846 Type II/III secretion system YPTB3756 IPR001460 Penicillin-binding protein, transpeptidase YPTB3756 IPR031376 Penicillin-binding protein, OB-like domain YPTB3756 IPR023346 Lysozyme-like domain superfamily YPTB3756 IPR001264 Glycosyl transferase, family 51 YPTB3756 IPR012338 Beta-lactamase/transpeptidase-like YPTB3756 IPR036950 Penicillin binding protein transglycosylase domain YPTB3757 IPR000086 NUDIX hydrolase domain YPTB3757 IPR020084 NUDIX hydrolase, conserved site YPTB3757 IPR015797 NUDIX hydrolase-like domain superfamily YPTB3758 IPR010771 Intracellular growth attenuator IgaA YPTB3759 IPR036412 HAD-like superfamily YPTB3759 IPR006439 HAD hydrolase, subfamily IA YPTB3759 IPR041492 Haloacid dehalogenase-like hydrolase YPTB3759 IPR023214 HAD superfamily YPTB3760 IPR002942 RNA-binding S4 domain YPTB3760 IPR036986 RNA-binding S4 domain superfamily YPTB3760 IPR025708 Heat shock protein 15 YPTB3761 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily YPTB3761 IPR016153 Heat shock protein Hsp33, N-terminal YPTB3761 IPR016154 Heat shock protein Hsp33, C-terminal YPTB3761 IPR000397 Heat shock protein Hsp33 YPTB3762 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPTB3762 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPTB3762 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPTB3762 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPTB3763 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB3763 IPR003660 HAMP domain YPTB3763 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3763 IPR005467 Histidine kinase domain YPTB3763 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB3763 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB3763 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3764 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3764 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3764 IPR039420 Transcriptional regulatory protein WalR-like YPTB3764 IPR001789 Signal transduction response regulator, receiver domain YPTB3764 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB3764 IPR011006 CheY-like superfamily YPTB3765 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTB3765 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPTB3765 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPTB3765 IPR028624 Transcription elongation factor GreA/GreB YPTB3765 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPTB3765 IPR006358 Transcription elongation factor GreB YPTB3765 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTB3765 IPR023459 Transcription elongation factor GreA/GreB family YPTB3766 IPR010994 RuvA domain 2-like YPTB3766 IPR037027 YqgF/RNase H-like domain superfamily YPTB3766 IPR022967 RNA-binding domain, S1 YPTB3766 IPR041692 HHH domain 9 YPTB3766 IPR003029 S1 domain YPTB3766 IPR018974 Tex-like protein, N-terminal YPTB3766 IPR032639 Tex protein, YqgF-like domain YPTB3766 IPR023323 Tex-like domain superfamily YPTB3766 IPR012340 Nucleic acid-binding, OB-fold YPTB3766 IPR012337 Ribonuclease H-like superfamily YPTB3766 IPR023319 Tex-like protein, HTH domain superfamily YPTB3766 IPR006641 YqgF/RNase H-like domain YPTB3767 IPR038157 Ferrous iron transporter, core domain YPTB3767 IPR007167 Ferrous iron transporter FeoA domain YPTB3767 IPR008988 Transcriptional repressor, C-terminal YPTB3768 IPR003373 Ferrous iron transport protein B YPTB3768 IPR005225 Small GTP-binding protein domain YPTB3768 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3768 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTB3768 IPR030389 FeoB-type guanine nucleotide-binding (G) domain YPTB3768 IPR011640 Ferrous iron transport protein B, C-terminal YPTB3768 IPR041069 FeoB, cytosolic helical domain YPTB3769 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3769 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YPTB3769 IPR015102 Transcriptional regulator HTH-type, FeoC YPTB3769 IPR036390 Winged helix DNA-binding domain superfamily YPTB3770 IPR025543 Dodecin-like YPTB3770 IPR010854 Domain of unknown function DUF1471 YPTB3770 IPR036275 YdgH-like superfamily YPTB3771 IPR029058 Alpha/Beta hydrolase fold YPTB3771 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase YPTB3771 IPR000073 Alpha/beta hydrolase fold-1 YPTB3772 IPR005222 Competence protein ComF YPTB3772 IPR029057 Phosphoribosyltransferase-like YPTB3772 IPR000836 Phosphoribosyltransferase domain YPTB3773 IPR034904 Fe-S cluster assembly domain superfamily YPTB3773 IPR035903 HesB-like domain superfamily YPTB3773 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPTB3773 IPR000361 FeS cluster biogenesis YPTB3773 IPR017726 Fe/S biogenesis protein NfuA YPTB3774 IPR017853 Glycoside hydrolase superfamily YPTB3774 IPR003385 Glycoside hydrolase, family 77 YPTB3775 IPR000811 Glycosyl transferase, family 35 YPTB3775 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPTB3775 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPTB3776 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3776 IPR000792 Transcription regulator LuxR, C-terminal YPTB3776 IPR011990 Tetratricopeptide-like helical domain superfamily YPTB3776 IPR023768 Transcriptional regulator HTH-type, MalT YPTB3776 IPR041617 MalT-like TPR region YPTB3776 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3776 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3777 IPR036873 Rhodanese-like domain superfamily YPTB3777 IPR001763 Rhodanese-like domain YPTB3777 IPR023695 Thiosulfate sulfurtransferase, bacterial YPTB3778 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPTB3778 IPR022764 Peptidase S54, rhomboid domain YPTB3778 IPR023662 Rhomboid protease GlpG YPTB3778 IPR038236 GlpG peptidase, N-terminal domain superfamily YPTB3778 IPR035952 Rhomboid-like superfamily YPTB3779 IPR014036 DeoR C-terminal sensor domain YPTB3779 IPR001034 DeoR-type HTH domain YPTB3779 IPR037171 NagB/RpiA transferase-like YPTB3779 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTB3779 IPR036390 Winged helix DNA-binding domain superfamily YPTB3779 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3782 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily YPTB3782 IPR006076 FAD dependent oxidoreductase YPTB3782 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3782 IPR031656 Alpha-glycerophosphate oxidase, C-terminal YPTB3782 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPTB3783 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPTB3783 IPR000811 Glycosyl transferase, family 35 YPTB3783 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPTB3784 IPR001296 Glycosyl transferase, family 1 YPTB3784 IPR011835 Bacterial/plant glycogen synthase YPTB3784 IPR013534 Starch synthase, catalytic domain YPTB3785 IPR011831 Glucose-1-phosphate adenylyltransferase YPTB3785 IPR011004 Trimeric LpxA-like superfamily YPTB3785 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPTB3785 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPTB3785 IPR029044 Nucleotide-diphospho-sugar transferases YPTB3785 IPR005835 Nucleotidyl transferase domain YPTB3786 IPR013780 Glycosyl hydrolase, all-beta YPTB3786 IPR004193 Glycoside hydrolase, family 13, N-terminal YPTB3786 IPR011837 Glycogen debranching enzyme, GlgX type YPTB3786 IPR022844 Glycogen debranching enzyme, bacterial YPTB3786 IPR014756 Immunoglobulin E-set YPTB3786 IPR013783 Immunoglobulin-like fold YPTB3786 IPR040784 Glycogen debranching enzyme, C-terminal domain YPTB3786 IPR017853 Glycoside hydrolase superfamily YPTB3786 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTB3787 IPR037439 1,4-alpha-glucan-branching enzyme YPTB3787 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPTB3787 IPR013783 Immunoglobulin-like fold YPTB3787 IPR017853 Glycoside hydrolase superfamily YPTB3787 IPR013780 Glycosyl hydrolase, all-beta YPTB3787 IPR004193 Glycoside hydrolase, family 13, N-terminal YPTB3787 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTB3787 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta YPTB3787 IPR014756 Immunoglobulin E-set YPTB3788 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPTB3788 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3788 IPR003018 GAF domain YPTB3788 IPR010559 Signal transduction histidine kinase, internal region YPTB3789 IPR013117 Intimin, C-terminal YPTB3789 IPR015217 Invasin, domain 3 YPTB3789 IPR008964 Invasin/intimin cell-adhesion fragments YPTB3789 IPR016187 C-type lectin fold YPTB3789 IPR013783 Immunoglobulin-like fold YPTB3789 IPR024519 Inverse autotransporter, beta-domain YPTB3789 IPR038177 Inverse autotransporter, beta-domain superfamily YPTB3789 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTB3789 IPR016186 C-type lectin-like/link domain superfamily YPTB3789 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTB3790 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTB3790 IPR036291 NAD(P)-binding domain superfamily YPTB3790 IPR012080 Aspartate-semialdehyde dehydrogenase YPTB3790 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPTB3790 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPTB3790 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTB3791 IPR002771 Multiple antibiotic resistance (MarC)-related YPTB3795 IPR008514 Type VI secretion system effector, Hcp YPTB3795 IPR003615 HNH nuclease YPTB3795 IPR036624 Hcp1-like superfamily YPTB3796 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3796 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPTB3796 IPR031322 Shikimate kinase/gluconokinase YPTB3797 IPR003474 Gluconate transporter YPTB3798 IPR028082 Periplasmic binding protein-like I YPTB3798 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTB3798 IPR000843 LacI-type HTH domain YPTB3798 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTB3799 IPR011051 RmlC-like cupin domain superfamily YPTB3799 IPR014710 RmlC-like jelly roll fold YPTB3799 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPTB3799 IPR003829 Pirin, N-terminal domain YPTB3799 IPR012093 Pirin YPTB3801 IPR001789 Signal transduction response regulator, receiver domain YPTB3801 IPR039420 Transcriptional regulatory protein WalR-like YPTB3801 IPR001867 OmpR/PhoB-type DNA-binding domain YPTB3801 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3801 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3801 IPR011006 CheY-like superfamily YPTB3803 IPR013785 Aldolase-type TIM barrel YPTB3803 IPR000771 Fructose-bisphosphate aldolase, class-II YPTB3803 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 YPTB3805 IPR028082 Periplasmic binding protein-like I YPTB3805 IPR025997 Periplasmic binding protein YPTB3806 IPR001851 ABC transporter, permease YPTB3807 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3807 IPR015861 ABC transporter, ribose import, RbsA YPTB3807 IPR017871 ABC transporter, conserved site YPTB3807 IPR003439 ABC transporter-like YPTB3807 IPR003593 AAA+ ATPase domain YPTB3808 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3808 IPR011006 CheY-like superfamily YPTB3808 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3808 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTB3808 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTB3808 IPR000014 PAS domain YPTB3808 IPR035965 PAS domain superfamily YPTB3808 IPR013656 PAS fold-4 YPTB3808 IPR005467 Histidine kinase domain YPTB3808 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTB3808 IPR001789 Signal transduction response regulator, receiver domain YPTB3809 IPR023166 HI0933-like insert domain superfamily YPTB3809 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3809 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like YPTB3810 IPR001204 Phosphate transporter YPTB3811 IPR019598 Universal stress protein B YPTB3812 IPR006016 UspA YPTB3812 IPR006015 Universal stress protein A family YPTB3812 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTB3813 IPR033524 Leu/Phe/Val dehydrogenases active site YPTB3813 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPTB3813 IPR033922 NAD(P) binding domain of glutamate dehydrogenase YPTB3813 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPTB3813 IPR014362 Glutamate dehydrogenase YPTB3813 IPR036291 NAD(P)-binding domain superfamily YPTB3813 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPTB3814 IPR006026 Peptidase, metallopeptidase YPTB3814 IPR011049 Serralysin-like metalloprotease, C-terminal YPTB3814 IPR034033 Serralysin-like metallopeptidase domain YPTB3814 IPR024079 Metallopeptidase, catalytic domain superfamily YPTB3814 IPR018511 Hemolysin-type calcium-binding conserved site YPTB3814 IPR001343 RTX calcium-binding nonapeptide repeat YPTB3814 IPR001818 Peptidase M10, metallopeptidase YPTB3814 IPR016294 Peptidase M10B YPTB3814 IPR013858 Peptidase M10 serralysin, C-terminal YPTB3815 IPR007536 Ribosomal RNA small subunit methyltransferase J YPTB3815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3816 IPR001567 Peptidase M3A/M3B catalytic domain YPTB3816 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPTB3817 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3817 IPR007473 Ribosomal RNA large subunit methyltransferase J YPTB3817 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB3818 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTB3818 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTB3818 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTB3818 IPR006322 Glutathione reductase, eukaryote/bacterial YPTB3818 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTB3818 IPR023753 FAD/NAD(P)-binding domain YPTB3818 IPR036188 FAD/NAD(P)-binding domain superfamily YPTB3819 IPR025736 PucR C-terminal helix-turn-helix domain YPTB3819 IPR041522 CdaR, GGDEF-like domain YPTB3819 IPR008599 Putative sugar diacid recognition YPTB3819 IPR042070 PucR C-terminal helix-turn-helix domain superfamily YPTB3820 IPR003474 Gluconate transporter YPTB3821 IPR036129 Glycerate kinase superfamily YPTB3821 IPR018193 Glycerate kinase, flavodoxin-like fold YPTB3821 IPR004381 Glycerate kinase YPTB3821 IPR018197 Glycerate kinase, restriction-enzyme-like fold YPTB3825 IPR005274 Inner membrane protein YhjD YPTB3825 IPR017039 Virulence factor BrkB YPTB3826 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily YPTB3826 IPR036265 HIT-like superfamily YPTB3826 IPR003763 CDP-diacylglycerol pyrophosphatase YPTB3827 IPR007844 AsmA YPTB3828 IPR001633 EAL domain YPTB3828 IPR035919 EAL domain superfamily YPTB3829 IPR004370 4-oxalocrotonate tautomerase YPTB3829 IPR014347 Tautomerase/MIF superfamily YPTB3829 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPTB3830 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTB3830 IPR029056 Ribokinase-like YPTB3830 IPR011611 Carbohydrate kinase PfkB YPTB3831 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTB3831 IPR007863 Peptidase M16, C-terminal YPTB3831 IPR011765 Peptidase M16, N-terminal YPTB3832 IPR023954 C4-dicarboxylate transport protein YPTB3832 IPR001991 Sodium:dicarboxylate symporter YPTB3832 IPR018107 Sodium:dicarboxylate symporter, conserved site YPTB3832 IPR036458 Sodium:dicarboxylate symporter superfamily YPTB3834 IPR010702 Periplasmic pectate lyase YPTB3835 IPR009331 Oligogalacturonate-specific porin YPTB3836 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPTB3836 IPR003660 HAMP domain YPTB3836 IPR029787 Nucleotide cyclase YPTB3836 IPR035919 EAL domain superfamily YPTB3836 IPR001633 EAL domain YPTB3836 IPR000160 GGDEF domain YPTB3837 IPR019834 Glycoside hydrolase, family 8, conserved site YPTB3837 IPR002037 Glycoside hydrolase, family 8 YPTB3837 IPR012341 Six-hairpin glycosidase-like superfamily YPTB3837 IPR008928 Six-hairpin glycosidase superfamily YPTB3838 IPR003593 AAA+ ATPase domain YPTB3838 IPR003439 ABC transporter-like YPTB3838 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3838 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB3838 IPR017871 ABC transporter, conserved site YPTB3839 IPR003593 AAA+ ATPase domain YPTB3839 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3839 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTB3839 IPR017871 ABC transporter, conserved site YPTB3839 IPR003439 ABC transporter-like YPTB3840 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTB3840 IPR035906 MetI-like superfamily YPTB3840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3841 IPR035906 MetI-like superfamily YPTB3841 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3842 IPR030678 Peptide/nickel binding protein, MppA-type YPTB3842 IPR039424 Solute-binding protein family 5 YPTB3842 IPR023765 Solute-binding protein family 5, conserved site YPTB3842 IPR000914 Solute-binding protein family 5 domain YPTB3843 IPR035251 ShlB, POTRA domain YPTB3843 IPR027282 Two partner secretion pathway transporter YPTB3843 IPR005565 Haemolysin activator HlyB, C-terminal YPTB3843 IPR034746 POTRA domain YPTB3843 IPR013686 Polypeptide-transport-associated, ShlB-type YPTB3844 IPR008638 Filamentous haemagglutinin, N-terminal YPTB3844 IPR025157 Hemagglutinin repeat YPTB3844 IPR008619 Filamentous haemagglutinin repeat YPTB3844 IPR006914 VENN motif-containing domain YPTB3844 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTB3844 IPR011050 Pectin lyase fold/virulence factor YPTB3844 IPR012334 Pectin lyase fold YPTB3844 IPR006626 Parallel beta-helix repeat YPTB3845 IPR021159 Glycerate/sugar phosphate transporter, conserved site YPTB3845 IPR000849 Sugar phosphate transporter YPTB3845 IPR036259 MFS transporter superfamily YPTB3845 IPR011701 Major facilitator superfamily YPTB3845 IPR020846 Major facilitator superfamily domain YPTB3846 IPR005467 Histidine kinase domain YPTB3846 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3846 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3846 IPR007895 MASE1 YPTB3846 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPTB3847 IPR000792 Transcription regulator LuxR, C-terminal YPTB3847 IPR001789 Signal transduction response regulator, receiver domain YPTB3847 IPR016032 Signal transduction response regulator, C-terminal effector YPTB3847 IPR011006 CheY-like superfamily YPTB3848 IPR012549 Phosphoethanolamine transferase, N-terminal YPTB3848 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTB3848 IPR040423 Phosphoethanolamine transferase YPTB3848 IPR000917 Sulfatase, N-terminal YPTB3849 IPR029058 Alpha/Beta hydrolase fold YPTB3849 IPR012354 Esterase/lipase YPTB3849 IPR022742 Serine aminopeptidase, S33 YPTB3850 IPR004840 Amino acid permease, conserved site YPTB3850 IPR004841 Amino acid permease/ SLC12A domain YPTB3851 IPR008948 L-Aspartase-like YPTB3851 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPTB3851 IPR001106 Aromatic amino acid lyase YPTB3851 IPR024083 Fumarase/histidase, N-terminal YPTB3851 IPR005921 Histidine ammonia-lyase YPTB3852 IPR035085 Urocanase, Rossmann-like domain YPTB3852 IPR023637 Urocanase YPTB3852 IPR035400 Urocanase, N-terminal domain YPTB3852 IPR035401 Urocanase, C-terminal domain YPTB3852 IPR023636 Urocanase conserved site YPTB3852 IPR038364 Urocanase, central domain superfamily YPTB3852 IPR036190 Urocanase superfamily YPTB3856 IPR011761 ATP-grasp fold YPTB3857 IPR002491 ABC transporter periplasmic binding domain YPTB3857 IPR033870 FatB domain YPTB3858 IPR000522 ABC transporter, permease protein, BtuC-like YPTB3858 IPR037294 ABC transporter, BtuC-like YPTB3859 IPR000522 ABC transporter, permease protein, BtuC-like YPTB3859 IPR037294 ABC transporter, BtuC-like YPTB3860 IPR017871 ABC transporter, conserved site YPTB3860 IPR003439 ABC transporter-like YPTB3860 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3860 IPR003593 AAA+ ATPase domain YPTB3864 IPR025166 Integrase, DNA-binding domain YPTB3864 IPR013762 Integrase-like, catalytic domain superfamily YPTB3864 IPR002104 Integrase, catalytic domain YPTB3864 IPR038488 Integrase, DNA-binding domain superfamily YPTB3864 IPR010998 Integrase/recombinase, N-terminal YPTB3864 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB3866 IPR009610 CbtA toxin of type IV toxin-antitoxin system YPTB3867 IPR038025 Antitoxin CbeA superfamily YPTB3867 IPR009320 Antitoxin CbeA YPTB3868 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTB3868 IPR025657 RadC-like JAB domain YPTB3868 IPR001405 Uncharacterised protein family UPF0758 YPTB3868 IPR037518 MPN domain YPTB3871 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3872 IPR002611 IstB-like ATP-binding protein YPTB3872 IPR003593 AAA+ ATPase domain YPTB3872 IPR001270 ClpA/B family YPTB3872 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB3872 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3875 IPR001584 Integrase, catalytic core YPTB3875 IPR006120 Resolvase, HTH domain YPTB3875 IPR017894 HTH domain, IS21 transposase-type YPTB3875 IPR036397 Ribonuclease H superfamily YPTB3875 IPR012337 Ribonuclease H-like superfamily YPTB3876 IPR003593 AAA+ ATPase domain YPTB3876 IPR001270 ClpA/B family YPTB3876 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTB3876 IPR002611 IstB-like ATP-binding protein YPTB3876 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3879 IPR040980 SWI2/SNF2 ATPase YPTB3879 IPR021810 Protein of unknown function DUF3387 YPTB3879 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTB3879 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3879 IPR004473 Restriction endonuclease, type I, HsdR YPTB3879 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal YPTB3881 IPR000055 Restriction endonuclease, type I, HsdS YPTB3882 IPR004546 Restriction endonuclease, type I, HsdM YPTB3882 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YPTB3882 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily YPTB3882 IPR003356 DNA methylase, adenine-specific YPTB3882 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTB3882 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3886 IPR002104 Integrase, catalytic domain YPTB3886 IPR010998 Integrase/recombinase, N-terminal YPTB3886 IPR025166 Integrase, DNA-binding domain YPTB3886 IPR038488 Integrase, DNA-binding domain superfamily YPTB3886 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTB3886 IPR013762 Integrase-like, catalytic domain superfamily YPTB3886 IPR004107 Integrase, SAM-like, N-terminal YPTB3887 IPR018060 DNA binding HTH domain, AraC-type YPTB3887 IPR018062 HTH domain AraC-type, conserved site YPTB3887 IPR009057 Homeobox-like domain superfamily YPTB3887 IPR020449 Transcription regulator HTH, AraC- type YPTB3887 IPR028082 Periplasmic binding protein-like I YPTB3888 IPR001851 ABC transporter, permease YPTB3889 IPR003439 ABC transporter-like YPTB3889 IPR003593 AAA+ ATPase domain YPTB3889 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3889 IPR017871 ABC transporter, conserved site YPTB3889 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPTB3890 IPR013456 D-xylose ABC transporter, substrate-binding protein YPTB3890 IPR025997 Periplasmic binding protein YPTB3890 IPR028082 Periplasmic binding protein-like I YPTB3891 IPR001998 Xylose isomerase YPTB3891 IPR036237 Xylose isomerase-like superfamily YPTB3891 IPR013452 Xylose isomerase, bacterial-type YPTB3892 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTB3892 IPR000577 Carbohydrate kinase, FGGY YPTB3892 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTB3892 IPR006000 Xylulokinase YPTB3892 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTB3894 IPR008962 PapD-like superfamily YPTB3894 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTB3894 IPR001829 Pili assembly chaperone, bacterial YPTB3894 IPR016148 Pili assembly chaperone, C-terminal YPTB3894 IPR018046 Pili assembly chaperone, conserved site YPTB3894 IPR016147 Pili assembly chaperone, N-terminal YPTB3894 IPR013783 Immunoglobulin-like fold YPTB3895 IPR018030 Fimbrial membrane usher, conserved site YPTB3895 IPR042186 Outer membrane usher protein FimD, plug domain YPTB3895 IPR025885 PapC, N-terminal domain YPTB3895 IPR037224 PapC, N-terminal domain superfamily YPTB3895 IPR025949 PapC-like, C-terminal domain YPTB3895 IPR000015 Outer membrane usher protein YPTB3896 IPR008966 Adhesion domain superfamily YPTB3896 IPR000259 Fimbrial-type adhesion domain YPTB3896 IPR036937 Fimbrial-type adhesion domain superfamily YPTB3897 IPR002656 Acyltransferase 3 YPTB3897 IPR032905 O-acetyltransferase WecH YPTB3899 IPR025948 HTH-like domain YPTB3899 IPR038965 Transposase InsF-like YPTB3899 IPR001584 Integrase, catalytic core YPTB3899 IPR036397 Ribonuclease H superfamily YPTB3899 IPR012337 Ribonuclease H-like superfamily YPTB3900 IPR014334 Ectoine utilization protein EutC YPTB3900 IPR036291 NAD(P)-binding domain superfamily YPTB3900 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPTB3900 IPR023401 Ornithine cyclodeaminase, N-terminal YPTB3901 IPR001926 Pyridoxal-phosphate dependent enzyme YPTB3901 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTB3901 IPR005789 Threonine dehydratase, catabolic YPTB3901 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTB3901 IPR002912 ACT domain YPTB3902 IPR011659 WD40-like Beta Propeller YPTB3902 IPR022223 Protein of unknown function DUF3748 YPTB3902 IPR011042 Six-bladed beta-propeller, TolB-like YPTB3903 IPR010780 Protein of unknown function DUF1375 YPTB3904 IPR023728 Small heat shock protein IbpA YPTB3904 IPR008978 HSP20-like chaperone YPTB3904 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPTB3904 IPR002068 Alpha crystallin/Hsp20 domain YPTB3905 IPR002068 Alpha crystallin/Hsp20 domain YPTB3905 IPR008978 HSP20-like chaperone YPTB3905 IPR022848 Small heat shock protein IbpB YPTB3905 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPTB3906 IPR006037 Regulator of K+ conductance, C-terminal YPTB3906 IPR023018 Transport protein YidE, putative YPTB3906 IPR006512 YidE/YbjL duplication YPTB3906 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTB3907 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3907 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3907 IPR004839 Aminotransferase, class I/classII YPTB3909 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTB3909 IPR017853 Glycoside hydrolase superfamily YPTB3909 IPR014635 Alpha-amylase, MalS type YPTB3910 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTB3910 IPR036291 NAD(P)-binding domain superfamily YPTB3910 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTB3910 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPTB3910 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTB3910 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTB3912 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTB3912 IPR006665 OmpA-like domain YPTB3912 IPR006664 Outer membrane protein, bacterial YPTB3912 IPR039567 Glycine zipper domain YPTB3912 IPR036737 OmpA-like domain superfamily YPTB3914 IPR004597 DNA-3-methyladenine glycosylase I YPTB3914 IPR005019 Methyladenine glycosylase YPTB3914 IPR011257 DNA glycosylase YPTB3915 IPR002310 Glycine-tRNA ligase, alpha subunit YPTB3915 IPR006194 Glycine-tRNA synthetase, heterodimeric YPTB3916 IPR006194 Glycine-tRNA synthetase, heterodimeric YPTB3916 IPR015944 Glycine-tRNA ligase, beta subunit YPTB3916 IPR008909 DALR anticodon binding YPTB3917 IPR021413 Protein of unknown function DUF3053 YPTB3918 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPTB3918 IPR003352 Phosphotransferase system, EIIC YPTB3918 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YPTB3918 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTB3918 IPR016152 Phosphotransferase/anion transporter YPTB3918 IPR013014 Phosphotransferase system, EIIC component, type 2 YPTB3918 IPR002178 PTS EIIA type-2 domain YPTB3918 IPR036095 PTS system IIB component-like superfamily YPTB3918 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTB3919 IPR036291 NAD(P)-binding domain superfamily YPTB3919 IPR013131 Mannitol dehydrogenase, N-terminal YPTB3919 IPR023027 Mannitol dehydrogenase, conserved site YPTB3919 IPR013118 Mannitol dehydrogenase, C-terminal YPTB3919 IPR000669 Mannitol dehydrogenase YPTB3919 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPTB3919 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTB3919 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTB3920 IPR038026 MtlR-like superfamily YPTB3920 IPR007761 Mannitol repressor MtlR-like YPTB3921 IPR021230 Protein of unknown function DUF2810 YPTB3924 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTB3924 IPR004090 Chemotaxis methyl-accepting receptor YPTB3924 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTB3924 IPR003660 HAMP domain YPTB3924 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTB3924 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTB3925 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPTB3925 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPTB3925 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPTB3925 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPTB3925 IPR019833 Manganese/iron superoxide dismutase, binding site YPTB3925 IPR001189 Manganese/iron superoxide dismutase YPTB3926 IPR003786 Sulfur carrier protein FdhD YPTB3926 IPR016193 Cytidine deaminase-like YPTB3928 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTB3928 IPR038384 Formate dehydrogenase, C-terminal domain superfamily YPTB3928 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria YPTB3928 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTB3928 IPR015246 Formate dehydrogenase, transmembrane YPTB3928 IPR014603 Formate dehydrogenase iron-sulphur subunit YPTB3929 IPR016174 Di-haem cytochrome, transmembrane YPTB3929 IPR006471 Formate dehydrogenase, gamma subunit YPTB3929 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTB3930 IPR006452 Formate dehydrogenase accessory protein YPTB3930 IPR024064 FdhE-like superfamily YPTB3931 IPR015424 Pyridoxal phosphate-dependent transferase YPTB3931 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPTB3931 IPR018319 L-seryl-tRNA selenium transferase-like YPTB3931 IPR004534 L-seryl-tRNA(Sec) selenium transferase YPTB3931 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTB3932 IPR036390 Winged helix DNA-binding domain superfamily YPTB3932 IPR036388 Winged helix-like DNA-binding domain superfamily YPTB3932 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTB3932 IPR009000 Translation protein, beta-barrel domain superfamily YPTB3932 IPR000795 Transcription factor, GTP-binding domain YPTB3932 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3932 IPR031157 Tr-type G domain, conserved site YPTB3932 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTB3932 IPR015191 Translation elongation factor SelB, winged helix, type 3 YPTB3932 IPR015190 Translation elongation factor SelB, winged helix, type 2 YPTB3932 IPR004535 Translation elongation factor, selenocysteine-specific YPTB3936 IPR020846 Major facilitator superfamily domain YPTB3936 IPR011701 Major facilitator superfamily YPTB3936 IPR036259 MFS transporter superfamily YPTB3937 IPR025948 HTH-like domain YPTB3937 IPR001584 Integrase, catalytic core YPTB3937 IPR012337 Ribonuclease H-like superfamily YPTB3937 IPR036397 Ribonuclease H superfamily YPTB3937 IPR038965 Transposase InsF-like YPTB3939 IPR036412 HAD-like superfamily YPTB3939 IPR023214 HAD superfamily YPTB3939 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTB3939 IPR000150 Cof family YPTB3940 IPR018522 DNA topoisomerase, type IIA, conserved site YPTB3940 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPTB3940 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPTB3940 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTB3940 IPR001241 DNA topoisomerase, type IIA YPTB3940 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3940 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTB3940 IPR003594 Histidine kinase/HSP90-like ATPase YPTB3940 IPR006171 TOPRIM domain YPTB3940 IPR041423 DNA gyrase subunit B insert domain YPTB3940 IPR002288 DNA gyrase B subunit, C-terminal YPTB3940 IPR011557 DNA gyrase, subunit B YPTB3940 IPR034160 DNA gyrase subunit B, TOPRIM domain YPTB3941 IPR042174 DNA-binding RecF, domain 2 YPTB3941 IPR003395 RecF/RecN/SMC, N-terminal YPTB3941 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3941 IPR018078 DNA-binding, RecF, conserved site YPTB3941 IPR001238 DNA-binding, RecF YPTB3942 IPR001001 DNA polymerase III, beta sliding clamp YPTB3942 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal YPTB3942 IPR022637 DNA polymerase III, beta sliding clamp, central YPTB3942 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal YPTB3943 IPR038454 DnaA, N-terminal domain superfamily YPTB3943 IPR024633 DnaA N-terminal domain YPTB3943 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPTB3943 IPR013317 Chromosomal replication initiator protein DnaA YPTB3943 IPR010921 Trp repressor/replication initiator YPTB3943 IPR020591 Chromosomal replication control, initiator DnaA-like YPTB3943 IPR001957 Chromosomal replication control, initiator DnaA YPTB3943 IPR003593 AAA+ ATPase domain YPTB3943 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPTB3943 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3945 IPR000271 Ribosomal protein L34 YPTB3945 IPR020939 Ribosomal protein L34, conserved site YPTB3946 IPR020568 Ribosomal protein S5 domain 2-type fold YPTB3946 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTB3946 IPR000100 Ribonuclease P YPTB3946 IPR020539 Ribonuclease P, conserved site YPTB3947 IPR002696 Putative membrane protein insertion efficiency factor YPTB3948 IPR038221 YidC, periplasmic domain superfamily YPTB3948 IPR038210 Membrane insertase YidC, periplasmic domain YPTB3948 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 YPTB3948 IPR028053 Membrane insertase YidC, N-terminal YPTB3948 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPTB3948 IPR019998 Membrane insertase YidC YPTB3949 IPR031168 TrmE-type guanine nucleotide-binding domain YPTB3949 IPR027368 tRNA modification GTPase MnmE domain 2 YPTB3949 IPR004520 tRNA modification GTPase MnmE YPTB3949 IPR018948 GTP-binding protein TrmE, N-terminal YPTB3949 IPR006073 GTP binding domain YPTB3949 IPR005225 Small GTP-binding protein domain YPTB3949 IPR025867 MnmE, helical domain YPTB3949 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPTB3949 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3950 IPR024906 Enoyl reductase FAD binding domain YPTB3950 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPTB3950 IPR010758 Trans-2-enoyl-CoA reductase YPTB3953 IPR026033 Azaguanine-like transporters YPTB3953 IPR006043 Xanthine/uracil/vitamin C permease YPTB3954 IPR006439 HAD hydrolase, subfamily IA YPTB3954 IPR023214 HAD superfamily YPTB3954 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTB3954 IPR036412 HAD-like superfamily YPTB3954 IPR041492 Haloacid dehalogenase-like hydrolase YPTB3955 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB3955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3955 IPR035906 MetI-like superfamily YPTB3956 IPR035906 MetI-like superfamily YPTB3956 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3956 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTB3957 IPR018313 Solute-binding protein family 3, conserved site YPTB3957 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTB3957 IPR001320 Ionotropic glutamate receptor YPTB3957 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTB3959 IPR028366 Phosphate transport system protein PhoU YPTB3959 IPR038078 PhoU-like domain superfamily YPTB3959 IPR026022 PhoU domain YPTB3960 IPR015850 ABC transporter, phosphate import, PstB YPTB3960 IPR017871 ABC transporter, conserved site YPTB3960 IPR003439 ABC transporter-like YPTB3960 IPR005670 Phosphate transport system permease protein 1 YPTB3960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3960 IPR003593 AAA+ ATPase domain YPTB3961 IPR035906 MetI-like superfamily YPTB3961 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3961 IPR005672 Phosphate transport system permease protein PstA YPTB3962 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTB3962 IPR035906 MetI-like superfamily YPTB3962 IPR011864 Phosphate ABC transporter, permease protein PstC YPTB3963 IPR024370 PBP domain YPTB3963 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS YPTB3964 IPR035466 GlmS/AgaS, SIS domain 1 YPTB3964 IPR035490 GlmS/FrlB, SIS domain 2 YPTB3964 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPTB3964 IPR017932 Glutamine amidotransferase type 2 domain YPTB3964 IPR001347 Sugar isomerase (SIS) YPTB3964 IPR029055 Nucleophile aminohydrolases, N-terminal YPTB3965 IPR011004 Trimeric LpxA-like superfamily YPTB3965 IPR001451 Hexapeptide repeat YPTB3965 IPR038009 GlmU, C-terminal LbH domain YPTB3965 IPR029044 Nucleotide-diphospho-sugar transferases YPTB3965 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPTB3965 IPR018357 Hexapeptide transferase, conserved site YPTB3965 IPR025877 MobA-like NTP transferase YPTB3966 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily YPTB3966 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit YPTB3966 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPTB3966 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal YPTB3966 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal YPTB3967 IPR005722 ATP synthase, F1 complex, beta subunit YPTB3967 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3967 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTB3967 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB3967 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal YPTB3967 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPTB3967 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPTB3967 IPR003593 AAA+ ATPase domain YPTB3968 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site YPTB3968 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily YPTB3968 IPR000131 ATP synthase, F1 complex, gamma subunit YPTB3969 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPTB3969 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTB3969 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTB3969 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPTB3969 IPR000793 ATP synthase, alpha subunit, C-terminal YPTB3969 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPTB3969 IPR005294 ATP synthase, F1 complex, alpha subunit YPTB3969 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain YPTB3969 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily YPTB3969 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTB3970 IPR000711 ATPase, OSCP/delta subunit YPTB3970 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily YPTB3970 IPR020781 ATPase, OSCP/delta subunit, conserved site YPTB3971 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast YPTB3971 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily YPTB3971 IPR005864 ATP synthase, F0 complex, subunit b, bacterial YPTB3972 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site YPTB3972 IPR038662 F1F0 ATP synthase subunit C superfamily YPTB3972 IPR002379 V-ATPase proteolipid subunit C-like domain YPTB3972 IPR035921 F/V-ATP synthase subunit C superfamily YPTB3972 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast YPTB3972 IPR000454 ATP synthase, F0 complex, subunit C YPTB3973 IPR035908 ATP synthase, F0 complex, subunit A superfamily YPTB3973 IPR000568 ATP synthase, F0 complex, subunit A YPTB3973 IPR023011 ATP synthase, F0 complex, subunit A, active site YPTB3974 IPR005598 ATP synthase protein I YPTB3975 IPR003682 rRNA small subunit methyltransferase G YPTB3975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTB3976 IPR020595 MnmG-related, conserved site YPTB3976 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related YPTB3976 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG YPTB3976 IPR026904 GidA associated domain 3 YPTB3976 IPR036188 FAD/NAD(P)-binding domain superfamily pYV0001 IPR019093 Rac1-binding domain pYV0001 IPR003547 Serine/threonine protein kinase, yersinia-type pYV0001 IPR011009 Protein kinase-like domain superfamily pYV0001 IPR000719 Protein kinase domain pYV0001 IPR008271 Serine/threonine-protein kinase, active site pYV0003 IPR012337 Ribonuclease H-like superfamily pYV0005 IPR003446 Plasmid replication initiation, RepA pYV0005 IPR017837 Plasmid replication initiator, RepA, IncFII type pYV0007 IPR019661 Replication regulatory protein RepA2 pYV0008 IPR012337 Ribonuclease H-like superfamily pYV0010 IPR014059 Conjugative relaxase, N-terminal pYV0010 IPR040987 TraI, N-terminal subdomain pYV0010 IPR014129 Conjugative transfer relaxase protein TraI pYV0010 IPR014862 TrwC relaxase pYV0010 IPR040668 TraI, 2B/2B-like domain pYV0010 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYV0010 IPR009767 DNA helicase, TraI type pYV0013 IPR008640 Head domain of trimeric autotransporter adhesin pYV0013 IPR008635 Coiled stalk of trimeric autotransporter adhesin pYV0013 IPR008126 Outer membrane adhesion, Yersinia pYV0013 IPR005594 YadA-like, C-terminal pYV0013 IPR011049 Serralysin-like metalloprotease, C-terminal pYV0016 IPR025296 Domain of unknown function DUF4158 pYV0016 IPR002513 Tn3 transposase DDE domain pYV0017 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily pYV0017 IPR006120 Resolvase, HTH domain pYV0017 IPR009057 Homeobox-like domain superfamily pYV0017 IPR006118 Recombinase, conserved site pYV0017 IPR006119 Resolvase, N-terminal catalytic domain pYV0018 IPR002514 Transposase IS3/IS911family pYV0018 IPR009057 Homeobox-like domain superfamily pYV0019 IPR012337 Ribonuclease H-like superfamily pYV0019 IPR025948 HTH-like domain pYV0019 IPR001584 Integrase, catalytic core pYV0019 IPR036397 Ribonuclease H superfamily pYV0021 IPR003593 AAA+ ATPase domain pYV0021 IPR001270 ClpA/B family pYV0021 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein pYV0021 IPR002611 IstB-like ATP-binding protein pYV0021 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYV0022 IPR017894 HTH domain, IS21 transposase-type pYV0022 IPR001584 Integrase, catalytic core pYV0022 IPR012337 Ribonuclease H-like superfamily pYV0023 IPR025948 HTH-like domain pYV0023 IPR001584 Integrase, catalytic core pYV0023 IPR012337 Ribonuclease H-like superfamily pYV0023 IPR036397 Ribonuclease H superfamily pYV0024 IPR005416 Type III secretion chaperone SycE pYV0024 IPR010261 Tir chaperone protein (CesT) family pYV0025 IPR003537 Yersinia virulence determinant YopE pYV0025 IPR015110 YopE, N-terminal domain pYV0025 IPR037168 Virulence factor YopE, GAP domain superfamily pYV0025 IPR014773 Virulence factor YopE, GAP domain pYV0027 IPR010985 Ribbon-helix-helix pYV0027 IPR038296 Antitoxin ParD superfamily pYV0027 IPR022789 Antitoxin ParD pYV0031 IPR004437 ParB/RepB/Spo0J partition protein pYV0031 IPR040873 SopB, HTH domain pYV0031 IPR036086 ParB/Sulfiredoxin superfamily pYV0031 IPR003115 ParB/Sulfiredoxin pYV0032 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYV0032 IPR025669 AAA domain pYV0034 IPR012337 Ribonuclease H-like superfamily pYV0035 IPR036397 Ribonuclease H superfamily pYV0035 IPR001584 Integrase, catalytic core pYV0035 IPR038965 Transposase InsF-like pYV0035 IPR012337 Ribonuclease H-like superfamily pYV0040 IPR016505 Type III secretion system YopQ pYV0041 IPR006473 Peptidase C58, YopT-type domain pYV0041 IPR038765 Papain-like cysteine peptidase superfamily pYV0041 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen pYV0042 IPR010261 Tir chaperone protein (CesT) family pYV0047 IPR001611 Leucine-rich repeat pYV0047 IPR032674 LRR-containing bacterial E3 ligase, N-terminal pYV0047 IPR032675 Leucine-rich repeat domain superfamily pYV0047 IPR032675 Leucine-rich repeat domain superfamily pYV0047 IPR032674 LRR-containing bacterial E3 ligase, N-terminal pYV0047 IPR001611 Leucine-rich repeat pYV0051 IPR032874 DDE domain pYV0054 IPR008898 YopD-like pYV0055 IPR006972 Secretion system effector C, SseC-like pYV0056 IPR011716 Tetratricopeptide TPR-3 pYV0056 IPR013026 Tetratricopeptide repeat-containing domain pYV0056 IPR011990 Tetratricopeptide-like helical domain superfamily pYV0056 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD pYV0056 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup pYV0057 IPR005413 Low calcium response V antigen pYV0057 IPR036139 Virulence-associated V antigen superfamily pYV0058 IPR009863 Type III secretion protein, LcrG pYV0059 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 pYV0059 IPR013405 Type III secretion system regulator, LcrR pYV0060 IPR042194 FHIPEP, domain 1 pYV0060 IPR025505 FHIPEP conserved site pYV0060 IPR001712 Type III secretion system FHIPEP pYV0060 IPR006302 Type III secretion protein HrcV pYV0060 IPR042193 FHIPEP, domain 3 pYV0060 IPR042196 FHIPEP, domain 4 pYV0061 IPR016684 Type III secretion system chaperone, YscY pYV0061 IPR011990 Tetratricopeptide-like helical domain superfamily pYV0062 IPR012672 Type III secretion system YscX pYV0063 IPR012673 Type III secretion system chaperone SycN pYV0064 IPR015144 Type III secretion system effector delivery regulator TyeA pYV0064 IPR013351 Type III secretion system effector delivery regulator TyeA-related pYV0064 IPR038347 TyeA superfamily pYV0065 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC pYV0065 IPR010812 Hypersensitivity response secretion-like, HrpJ pYV0067 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYV0067 IPR013380 ATPase, type III secretion system, H+-transporting pYV0067 IPR005714 ATPase, type III secretion system, FliI/YscN pYV0067 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain pYV0067 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain pYV0067 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site pYV0067 IPR003593 AAA+ ATPase domain pYV0067 IPR040627 T3SS EscN ATPase, C-terminal pYV0068 IPR009929 Type III secretion sytem,YscO pYV0069 IPR021136 Flagellar hook-length control protein-like, C-terminal pYV0069 IPR013354 Type III secretion system needle length determinant, C-terminal domain pYV0070 IPR001543 Surface presentation of antigen (SpoA) pYV0070 IPR036429 SpoA-like superfamily pYV0070 IPR003283 Type III secretion system outer membrane, SpaO pYV0070 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO pYV0071 IPR005838 Type III secretion system inner membrane P protein pYV0071 IPR005773 Yop virulence translocation protein R pYV0072 IPR002191 Bacterial export protein family 3 pYV0072 IPR006306 Type III secretion protein HrpO pYV0073 IPR006304 Type III secretion protein SpaR/YscT pYV0073 IPR002010 Type III secretion system inner membrane R protein pYV0074 IPR006307 Type III exporter system, secretion apparatus protein BsaZ pYV0074 IPR006135 Type III secretion system substrate exporter pYV0074 IPR029025 Type III secretion system substrate exporter, C-terminal pYV0076 IPR003313 AraC-type arabinose-binding/dimerisation domain pYV0076 IPR037923 Transcription regulator HTH-like pYV0076 IPR020449 Transcription regulator HTH, AraC- type pYV0076 IPR018060 DNA binding HTH domain, AraC-type pYV0076 IPR009057 Homeobox-like domain superfamily pYV0076 IPR018062 HTH domain AraC-type, conserved site pYV0077 IPR035181 Protein of unknown function DUF5463 pYV0078 IPR013353 Type III secretion system chaperone YscB pYV0078 IPR010261 Tir chaperone protein (CesT) family pYV0080 IPR000253 Forkhead-associated (FHA) domain pYV0080 IPR032034 Yop protein translocation protein D, periplasmic domain pYV0080 IPR032030 YscD, cytoplasmic domain pYV0080 IPR012843 Type III secretion system YscD/HrpQ pYV0080 IPR008984 SMAD/FHA domain superfamily pYV0081 IPR012671 Type III secretion system, secretion protein E pYV0082 IPR011841 Type III secretion system, needle protein pYV0082 IPR037203 Type III secretion, needle-protein-like superfamily pYV0082 IPR021123 Type III secretion, needle-protein-like pYV0083 IPR013348 Type III secretion system YscG pYV0083 IPR011990 Tetratricopeptide-like helical domain superfamily pYV0084 IPR013349 Type III secretion system effector YopR pYV0084 IPR041814 Type III secretion system virulence factor YopR, core domain pYV0085 IPR012670 Type III secretion system, YscI/HrpB pYV0086 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ pYV0086 IPR006182 Secretory protein YscJ/FliF pYV0087 IPR009510 Type III secretion system, secretion protein K pYV0088 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE pYV0088 IPR012842 Type III secretion system HrpE/YscL pYV0089 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily pYV0089 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal pYV0090 IPR009057 Homeobox-like domain superfamily pYV0090 IPR002514 Transposase IS3/IS911family pYV0094 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily pYV0094 IPR016130 Protein-tyrosine phosphatase, active site pYV0094 IPR003595 Protein-tyrosine phosphatase, catalytic pYV0094 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH pYV0094 IPR000387 Tyrosine specific protein phosphatases domain pYV0094 IPR000242 PTP type protein phosphatase pYV0094 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal pYV0094 IPR029021 Protein-tyrosine phosphatase-like pYV0095 IPR001584 Integrase, catalytic core pYV0095 IPR036397 Ribonuclease H superfamily pYV0095 IPR012337 Ribonuclease H-like superfamily pYV0095 IPR025948 HTH-like domain pYptb0004 IPR023346 Lysozyme-like domain superfamily pYptb0004 IPR008258 Transglycosylase SLT domain 1 pYptb0006 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYptb0006 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain pYptb0006 IPR004346 CagE, TrbE, VirB component of type IV transporter system pYptb0008 IPR036165 YefM-like superfamily pYptb0008 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM pYptb0009 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily pYptb0009 IPR009614 Toxin YoeB pYptb0012 IPR007430 Bacterial virulence protein VirB8 pYptb0012 IPR032710 NTF2-like domain superfamily pYptb0012 IPR026264 Type IV secretion system protein VirB8/PtlE pYptb0013 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily pYptb0013 IPR033645 VirB9/CagX/TrbG, C-terminal pYptb0013 IPR014148 P-type conjugative transfer protein VirB9 pYptb0013 IPR010258 Conjugal transfer, TrbG/VirB9/CagX pYptb0014 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI pYptb0014 IPR042217 Type IV secretion system, VirB10/TrbI pYptb0015 IPR014155 Type IV secretion system protein VirB11 pYptb0015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 pYptb0015 IPR001482 Type II/IV secretion system protein pYptb0015 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYptb0020 IPR001801 Histone-like protein H-NS pYptb0020 IPR027454 Histone-like protein H-NS, N-terminal pYptb0020 IPR027444 Histone-like protein H-NS, C-terminal domain pYptb0020 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily pYptb0031 IPR023406 DNA topoisomerase, type IA, active site pYptb0031 IPR000380 DNA topoisomerase, type IA pYptb0031 IPR003601 DNA topoisomerase, type IA, domain 2 pYptb0031 IPR013497 DNA topoisomerase, type IA, central pYptb0031 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 pYptb0031 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 pYptb0031 IPR005738 DNA topoisomerase III pYptb0031 IPR034144 DNA topoisomerase 3-like, TOPRIM domain pYptb0031 IPR006171 TOPRIM domain pYptb0031 IPR003602 DNA topoisomerase, type IA, DNA-binding domain pYptb0031 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 pYptb0031 IPR023405 DNA topoisomerase, type IA, core domain pYptb0035 IPR013610 Domain of unknown function DUF1738 pYptb0035 IPR006171 TOPRIM domain pYptb0035 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain pYptb0035 IPR041459 Polyvalent protein, metallopeptidase domain pYptb0037 IPR027417 P-loop containing nucleoside triphosphate hydrolase pYptb0037 IPR009061 Putative DNA-binding domain superfamily pYptb0037 IPR000551 MerR-type HTH domain pYptb0037 IPR025669 AAA domain pYptb0037 IPR017818 Plasmid partitioning protein, RepA