locus-tag class description YPTS_0001 IPR003593 AAA+ ATPase domain YPTS_0001 IPR001957 Chromosomal replication control, initiator DnaA YPTS_0001 IPR010921 Trp repressor/replication initiator YPTS_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0001 IPR024633 DnaA N-terminal domain YPTS_0001 IPR038454 DnaA, N-terminal domain superfamily YPTS_0001 IPR013317 Chromosomal replication initiator protein DnaA YPTS_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPTS_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPTS_0001 IPR020591 Chromosomal replication control, initiator DnaA-like YPTS_0002 IPR001001 DNA polymerase III, beta sliding clamp YPTS_0002 IPR022637 DNA polymerase III, beta sliding clamp, central YPTS_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal YPTS_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal YPTS_0003 IPR042174 DNA-binding RecF, domain 2 YPTS_0003 IPR003395 RecF/RecN/SMC, N-terminal YPTS_0003 IPR001238 DNA-binding, RecF YPTS_0003 IPR018078 DNA-binding, RecF, conserved site YPTS_0003 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0004 IPR011557 DNA gyrase, subunit B YPTS_0004 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0004 IPR041423 DNA gyrase subunit B insert domain YPTS_0004 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0004 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0004 IPR034160 DNA gyrase subunit B, TOPRIM domain YPTS_0004 IPR018522 DNA topoisomerase, type IIA, conserved site YPTS_0004 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPTS_0004 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPTS_0004 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTS_0004 IPR006171 TOPRIM domain YPTS_0004 IPR002288 DNA gyrase B subunit, C-terminal YPTS_0004 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_0004 IPR001241 DNA topoisomerase, type IIA YPTS_0005 IPR023214 HAD superfamily YPTS_0005 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTS_0005 IPR036412 HAD-like superfamily YPTS_0005 IPR000150 Cof family YPTS_0007 IPR038965 Transposase InsF-like YPTS_0007 IPR036397 Ribonuclease H superfamily YPTS_0007 IPR012337 Ribonuclease H-like superfamily YPTS_0007 IPR001584 Integrase, catalytic core YPTS_0007 IPR025948 HTH-like domain YPTS_0009 IPR020846 Major facilitator superfamily domain YPTS_0009 IPR036259 MFS transporter superfamily YPTS_0009 IPR011701 Major facilitator superfamily YPTS_0013 IPR001207 Transposase, mutator type YPTS_0014 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0014 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPTS_0015 IPR025877 MobA-like NTP transferase YPTS_0015 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_0015 IPR013482 Molybdenum cofactor guanylyltransferase YPTS_0016 IPR038134 YihD-like superfamily YPTS_0016 IPR009383 Protein of unknown function DUF1040 YPTS_0017 IPR032882 SrkA/RdoA protein kinase YPTS_0017 IPR011009 Protein kinase-like domain superfamily YPTS_0017 IPR002575 Aminoglycoside phosphotransferase YPTS_0018 IPR013766 Thioredoxin domain YPTS_0018 IPR017937 Thioredoxin, conserved site YPTS_0018 IPR036249 Thioredoxin-like superfamily YPTS_0018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPTS_0018 IPR001853 DSBA-like thioredoxin domain YPTS_0019 IPR029060 PIN-like domain superfamily YPTS_0019 IPR002562 3'-5' exonuclease domain YPTS_0019 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPTS_0019 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPTS_0019 IPR036397 Ribonuclease H superfamily YPTS_0019 IPR012337 Ribonuclease H-like superfamily YPTS_0019 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPTS_0019 IPR020045 DNA polymerase I-like, H3TH domain YPTS_0019 IPR018320 DNA polymerase 1 YPTS_0019 IPR002298 DNA polymerase A YPTS_0019 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPTS_0019 IPR008918 Helix-hairpin-helix motif, class 2 YPTS_0019 IPR002421 5'-3' exonuclease, N-terminal YPTS_0020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0020 IPR006073 GTP binding domain YPTS_0020 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPTS_0020 IPR030393 EngB-type guanine nucleotide-binding (G) domain YPTS_0021 IPR007336 Der GTPase activator YPTS_0022 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_0022 IPR007197 Radical SAM YPTS_0022 IPR010723 HemN, C-terminal YPTS_0022 IPR006638 Elp3/MiaB/NifB YPTS_0022 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTS_0022 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN YPTS_0023 IPR011006 CheY-like superfamily YPTS_0023 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_0023 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_0023 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_0023 IPR001789 Signal transduction response regulator, receiver domain YPTS_0023 IPR010114 DNA-binding transcriptional regulator NtrC YPTS_0023 IPR002197 DNA binding HTH domain, Fis-type YPTS_0023 IPR009057 Homeobox-like domain superfamily YPTS_0023 IPR025944 Sigma-54 interaction domain, conserved site YPTS_0023 IPR003593 AAA+ ATPase domain YPTS_0023 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0024 IPR005467 Histidine kinase domain YPTS_0024 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0024 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0024 IPR035965 PAS domain superfamily YPTS_0024 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0024 IPR000014 PAS domain YPTS_0024 IPR013767 PAS fold YPTS_0024 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0024 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0025 IPR027302 Glutamine synthetase, N-terminal conserved site YPTS_0025 IPR004809 Glutamine synthetase type I YPTS_0025 IPR001637 Glutamine synthetase class-I, adenylation site YPTS_0025 IPR027303 Glutamine synthetase, glycine-rich site YPTS_0025 IPR008146 Glutamine synthetase, catalytic domain YPTS_0025 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPTS_0025 IPR036651 Glutamine synthetase, N-terminal domain superfamily YPTS_0025 IPR008147 Glutamine synthetase, beta-Grasp domain YPTS_0027 IPR036412 HAD-like superfamily YPTS_0027 IPR006439 HAD hydrolase, subfamily IA YPTS_0027 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_0027 IPR023214 HAD superfamily YPTS_0027 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_0028 IPR023679 Uncharacterised protein family UPF0761, bacterial YPTS_0028 IPR017039 Virulence factor BrkB YPTS_0029 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YPTS_0029 IPR003732 D-aminoacyl-tRNA deacylase DTD YPTS_0030 IPR012660 Thioesterase, putative YPTS_0030 IPR029069 HotDog domain superfamily YPTS_0030 IPR000182 GNAT domain YPTS_0030 IPR016181 Acyl-CoA N-acyltransferase YPTS_0031 IPR007844 AsmA YPTS_0032 IPR006043 Xanthine/uracil/vitamin C permease YPTS_0032 IPR006042 Xanthine/uracil permease YPTS_0033 IPR004445 Sodium/glutamate symport carrier protein GltS YPTS_0034 IPR011545 DEAD/DEAH box helicase domain YPTS_0034 IPR033454 RecG, wedge domain YPTS_0034 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0034 IPR012340 Nucleic acid-binding, OB-fold YPTS_0034 IPR001650 Helicase, C-terminal YPTS_0034 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0034 IPR004609 ATP-dependent DNA helicase RecG YPTS_0035 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase YPTS_0035 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_0035 IPR029028 Alpha/beta knot methyltransferases YPTS_0035 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTS_0035 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPTS_0036 IPR012676 TGS-like YPTS_0036 IPR033655 RelA, TGS domain YPTS_0036 IPR012675 Beta-grasp domain superfamily YPTS_0036 IPR002912 ACT domain YPTS_0036 IPR003607 HD/PDEase domain YPTS_0036 IPR004095 TGS YPTS_0036 IPR007685 RelA/SpoT YPTS_0036 IPR004811 RelA/SpoT family YPTS_0037 IPR003716 DNA-directed RNA polymerase, omega subunit YPTS_0037 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPTS_0037 IPR036161 RPB6/omega subunit-like superfamily YPTS_0037 IPR012293 RNA polymerase subunit, RPB6/omega YPTS_0038 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0038 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTS_0038 IPR020590 Guanylate kinase, conserved site YPTS_0038 IPR017665 Guanylate kinase YPTS_0038 IPR008144 Guanylate kinase-like domain YPTS_0039 IPR020923 DNA ligase B YPTS_0039 IPR013839 NAD-dependent DNA ligase, adenylation YPTS_0039 IPR013840 NAD-dependent DNA ligase, N-terminal YPTS_0039 IPR012340 Nucleic acid-binding, OB-fold YPTS_0039 IPR004150 NAD-dependent DNA ligase, OB-fold YPTS_0039 IPR010994 RuvA domain 2-like YPTS_0040 IPR005115 Uncharacterised domain UPF0126 YPTS_0042 IPR005229 Conserved hypothetical protein CHP00255 YPTS_0042 IPR013551 Domain of unknown function DUF1732 YPTS_0042 IPR013527 YicC-like, N-terminal YPTS_0043 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPTS_0043 IPR036345 Exoribonuclease, PH domain 2 superfamily YPTS_0043 IPR027408 PNPase/RNase PH domain superfamily YPTS_0043 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0043 IPR002381 Ribonuclease PH, bacterial-type YPTS_0043 IPR018336 Ribonuclease PH, conserved site YPTS_0043 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPTS_0044 IPR029057 Phosphoribosyltransferase-like YPTS_0044 IPR000836 Phosphoribosyltransferase domain YPTS_0044 IPR004467 Orotate phosphoribosyl transferase domain YPTS_0044 IPR023031 Orotate phosphoribosyltransferase YPTS_0045 IPR023769 Nucleoid occlusion factor SlmA YPTS_0045 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTS_0045 IPR009057 Homeobox-like domain superfamily YPTS_0045 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_0045 IPR001647 DNA-binding HTH domain, TetR-type YPTS_0046 IPR029054 dUTPase-like YPTS_0046 IPR033704 dUTPase, trimeric YPTS_0046 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPTS_0046 IPR036157 dUTPase-like superfamily YPTS_0047 IPR036551 Flavin prenyltransferase-like YPTS_0047 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPTS_0047 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPTS_0047 IPR003382 Flavoprotein YPTS_0047 IPR035929 CoaB-like superfamily YPTS_0048 IPR025657 RadC-like JAB domain YPTS_0048 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTS_0048 IPR037518 MPN domain YPTS_0048 IPR010994 RuvA domain 2-like YPTS_0048 IPR001405 Uncharacterised protein family UPF0758 YPTS_0048 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPTS_0049 IPR026569 Ribosomal protein L28/L24 YPTS_0049 IPR034704 L28p-like YPTS_0049 IPR037147 Ribosomal protein L28/L24 superfamily YPTS_0049 IPR001383 Ribosomal protein L28 YPTS_0050 IPR001705 Ribosomal protein L33 YPTS_0050 IPR018264 Ribosomal protein L33, conserved site YPTS_0050 IPR038584 Ribosomal protein L33 superfamily YPTS_0050 IPR011332 Zinc-binding ribosomal protein YPTS_0051 IPR020629 Formamidopyrimidine-DNA glycosylase YPTS_0051 IPR010979 Ribosomal protein S13-like, H2TH YPTS_0051 IPR035937 MutM-like, N-terminal YPTS_0051 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type YPTS_0051 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPTS_0051 IPR010663 Zinc finger, FPG/IleRS-type YPTS_0051 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain YPTS_0051 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPTS_0052 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0052 IPR001980 Phosphopantetheine adenylyltransferase YPTS_0052 IPR004821 Cytidyltransferase-like domain YPTS_0053 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_0053 IPR001173 Glycosyltransferase 2-like YPTS_0054 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPTS_0054 IPR039901 3-deoxy-D-manno-octulosonic acid transferase YPTS_0054 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily YPTS_0055 IPR002201 Glycosyl transferase, family 9 YPTS_0055 IPR011908 Lipopolysaccharide heptosyltransferase I YPTS_0056 IPR011910 ADP-heptose--LPS heptosyltransferase 2 YPTS_0056 IPR002201 Glycosyl transferase, family 9 YPTS_0057 IPR036291 NAD(P)-binding domain superfamily YPTS_0057 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPTS_0057 IPR001509 NAD-dependent epimerase/dehydratase YPTS_0058 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTS_0058 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0058 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0058 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0058 IPR004839 Aminotransferase, class I/classII YPTS_0058 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPTS_0059 IPR020843 Polyketide synthase, enoylreductase domain YPTS_0059 IPR004627 L-threonine 3-dehydrogenase YPTS_0059 IPR011032 GroES-like superfamily YPTS_0059 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPTS_0059 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_0059 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_0059 IPR036291 NAD(P)-binding domain superfamily YPTS_0060 IPR006837 Divergent polysaccharide deacetylase YPTS_0060 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_0061 IPR016047 Peptidase M23 YPTS_0061 IPR011055 Duplicated hybrid motif YPTS_0062 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily YPTS_0062 IPR011258 BPG-independent PGAM, N-terminal YPTS_0062 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPTS_0062 IPR006124 Metalloenzyme YPTS_0062 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_0063 IPR001763 Rhodanese-like domain YPTS_0063 IPR036873 Rhodanese-like domain superfamily YPTS_0064 IPR036249 Thioredoxin-like superfamily YPTS_0064 IPR011900 Glutaredoxin, GrxC YPTS_0064 IPR014025 Glutaredoxin subgroup YPTS_0064 IPR002109 Glutaredoxin YPTS_0064 IPR011767 Glutaredoxin active site YPTS_0065 IPR035958 SecB-like superfamily YPTS_0065 IPR003708 Bacterial protein export chaperone SecB YPTS_0066 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPTS_0066 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPTS_0066 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_0066 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0066 IPR036291 NAD(P)-binding domain superfamily YPTS_0066 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPTS_0067 IPR011004 Trimeric LpxA-like superfamily YPTS_0067 IPR018357 Hexapeptide transferase, conserved site YPTS_0067 IPR010493 Serine acetyltransferase, N-terminal YPTS_0067 IPR042122 Serine acetyltransferase, N-terminal domain superfamily YPTS_0067 IPR001451 Hexapeptide repeat YPTS_0067 IPR005881 Serine O-acetyltransferase YPTS_0068 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_0068 IPR029028 Alpha/beta knot methyltransferases YPTS_0068 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTS_0068 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPTS_0069 IPR018060 DNA binding HTH domain, AraC-type YPTS_0069 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTS_0069 IPR009057 Homeobox-like domain superfamily YPTS_0069 IPR016221 Bifunctional regulatory protein Ada YPTS_0069 IPR004026 Ada DNA repair, metal-binding YPTS_0069 IPR035451 Ada-like domain superfamily YPTS_0069 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTS_0069 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPTS_0069 IPR018062 HTH domain AraC-type, conserved site YPTS_0069 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPTS_0069 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0069 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPTS_0070 IPR038515 CpxA, periplasmic domain superfamily YPTS_0070 IPR003660 HAMP domain YPTS_0070 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0070 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPTS_0070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0070 IPR005467 Histidine kinase domain YPTS_0070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0070 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0070 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0071 IPR011006 CheY-like superfamily YPTS_0071 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0071 IPR039420 Transcriptional regulatory protein WalR-like YPTS_0071 IPR001789 Signal transduction response regulator, receiver domain YPTS_0071 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_0072 IPR012899 LTXXQ motif family protein YPTS_0074 IPR006842 Transposase (putative), YhgA-like YPTS_0074 IPR010106 Recombination-promoting nuclease RpnA YPTS_0076 IPR002524 Cation efflux protein YPTS_0076 IPR027470 Cation efflux protein, cytoplasmic domain YPTS_0076 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPTS_0076 IPR023783 Cation efflux pump FieF YPTS_0076 IPR027469 Cation efflux transmembrane domain superfamily YPTS_0077 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type YPTS_0077 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic YPTS_0077 IPR015912 Phosphofructokinase, conserved site YPTS_0077 IPR022953 ATP-dependent 6-phosphofructokinase YPTS_0077 IPR035966 Phosphofructokinase superfamily YPTS_0077 IPR000023 Phosphofructokinase domain YPTS_0078 IPR000957 Sulphate/thiosulphate-binding, conserved site YPTS_0078 IPR034408 Sulphate/thiosulphate-binding site YPTS_0078 IPR005669 Thiosulphate/Sulfate-binding protein YPTS_0081 IPR001898 Solute carrier family 13 YPTS_0081 IPR030676 Citrate carrier CitT-related YPTS_0082 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPTS_0082 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTS_0082 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPTS_0083 IPR024078 Putative deacetylase LmbE-like domain superfamily YPTS_0083 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPTS_0084 IPR005119 LysR, substrate-binding YPTS_0084 IPR000847 Transcription regulator HTH, LysR YPTS_0084 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0084 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0085 IPR000652 Triosephosphate isomerase YPTS_0085 IPR020861 Triosephosphate isomerase, active site YPTS_0085 IPR013785 Aldolase-type TIM barrel YPTS_0085 IPR035990 Triosephosphate isomerase superfamily YPTS_0085 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPTS_0086 IPR009918 Protein of unknown function DUF1454 YPTS_0087 IPR008523 Protein of unknown function DUF805 YPTS_0088 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_0088 IPR017938 Riboflavin synthase-like beta-barrel YPTS_0088 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_0088 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_0088 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_0088 IPR033892 Ferredoxin--NADP reductase, bacteria YPTS_0089 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPTS_0090 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTS_0090 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_0090 IPR000577 Carbohydrate kinase, FGGY YPTS_0090 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_0090 IPR005999 Glycerol kinase YPTS_0091 IPR000425 Major intrinsic protein YPTS_0091 IPR023271 Aquaporin-like YPTS_0091 IPR022357 Major intrinsic protein, conserved site YPTS_0092 IPR009252 Cell division protein ZapB YPTS_0093 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0093 IPR005074 Peptidase C39, bacteriocin processing YPTS_0093 IPR039421 Type I protein exporter YPTS_0093 IPR011527 ABC transporter type 1, transmembrane domain YPTS_0093 IPR003439 ABC transporter-like YPTS_0093 IPR017871 ABC transporter, conserved site YPTS_0093 IPR033838 Colicin V processing peptidase YPTS_0093 IPR003593 AAA+ ATPase domain YPTS_0093 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_0094 IPR006144 Secretion protein HlyD, conserved site YPTS_0094 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_0097 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPTS_0097 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPTS_0097 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPTS_0097 IPR010203 Regulator of ribonuclease activity A YPTS_0098 IPR000537 UbiA prenyltransferase family YPTS_0098 IPR026046 UbiA prenyltransferase domain containing protein 1 YPTS_0098 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPTS_0099 IPR003959 ATPase, AAA-type, core YPTS_0099 IPR003593 AAA+ ATPase domain YPTS_0099 IPR019489 Clp ATPase, C-terminal YPTS_0099 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0099 IPR004491 Heat shock protein HslU YPTS_0100 IPR022281 ATP-dependent protease, HslV subunit YPTS_0100 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_0100 IPR001353 Proteasome, subunit alpha/beta YPTS_0100 IPR023333 Proteasome B-type subunit YPTS_0101 IPR011930 Cell division protein FtsN YPTS_0101 IPR036680 Sporulation-like domain superfamily YPTS_0101 IPR007730 Sporulation-like domain YPTS_0102 IPR000843 LacI-type HTH domain YPTS_0102 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_0102 IPR028082 Periplasmic binding protein-like I YPTS_0104 IPR041222 Primosomal protein N', 3' DNA-binding domain YPTS_0104 IPR005259 Primosomal protein N' YPTS_0104 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily YPTS_0104 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0104 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0104 IPR011545 DEAD/DEAH box helicase domain YPTS_0104 IPR001650 Helicase, C-terminal YPTS_0104 IPR041236 Primosomal protein N, C-terminal domain YPTS_0104 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain YPTS_0105 IPR027491 Ribosomal protein L31 type A YPTS_0105 IPR002150 Ribosomal protein L31 YPTS_0105 IPR034704 L28p-like YPTS_0105 IPR042105 Ribosomal protein L31 superfamily YPTS_0106 IPR038972 Inner membrane protein YiaA-like YPTS_0106 IPR008024 YiaAB two helix YPTS_0107 IPR002084 Methionine repressor MetJ YPTS_0107 IPR023453 Methionine repressor MetJ domain superfamily YPTS_0107 IPR010985 Ribbon-helix-helix YPTS_0108 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0108 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0108 IPR011821 O-succinylhomoserine (thiol)-lyase YPTS_0108 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTS_0108 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0109 IPR001342 Homoserine dehydrogenase, catalytic YPTS_0109 IPR019811 Homoserine dehydrogenase, conserved site YPTS_0109 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPTS_0109 IPR018042 Aspartate kinase, conserved site YPTS_0109 IPR001341 Aspartate kinase YPTS_0109 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPTS_0109 IPR036393 Acetylglutamate kinase-like superfamily YPTS_0109 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPTS_0109 IPR036291 NAD(P)-binding domain superfamily YPTS_0109 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_0110 IPR029041 FAD-linked oxidoreductase-like YPTS_0110 IPR003171 Methylenetetrahydrofolate reductase YPTS_0110 IPR004620 5,10-methylenetetrahydrofolate reductase YPTS_0113 IPR021135 Phosphoenolpyruvate carboxylase YPTS_0113 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_0113 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site YPTS_0113 IPR033129 Phosphoenolpyruvate carboxylase, His active site YPTS_0113 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPTS_0114 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTS_0114 IPR036264 Bacterial exopeptidase dimerisation domain YPTS_0114 IPR002933 Peptidase M20 YPTS_0114 IPR011650 Peptidase M20, dimerisation domain YPTS_0114 IPR010169 Acetylornithine deacetylase ArgE YPTS_0115 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTS_0115 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPTS_0115 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPTS_0115 IPR036291 NAD(P)-binding domain superfamily YPTS_0115 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTS_0117 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic YPTS_0117 IPR037528 Acetylglutamate kinase ArgB YPTS_0117 IPR004662 Acetylglutamate kinase family YPTS_0117 IPR036393 Acetylglutamate kinase-like superfamily YPTS_0117 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_0118 IPR029419 Argininosuccinate lyase, C-terminal YPTS_0118 IPR009049 Argininosuccinate lyase YPTS_0118 IPR024083 Fumarase/histidase, N-terminal YPTS_0118 IPR020557 Fumarate lyase, conserved site YPTS_0118 IPR000362 Fumarate lyase family YPTS_0118 IPR022761 Fumarate lyase, N-terminal YPTS_0118 IPR008948 L-Aspartase-like YPTS_0119 IPR011276 TonB-dependent haem/haemoglobin receptor YPTS_0119 IPR039426 Vitamin B12 transporter BtuB-like YPTS_0119 IPR012910 TonB-dependent receptor, plug domain YPTS_0119 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_0119 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_0119 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPTS_0119 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_0121 IPR003593 AAA+ ATPase domain YPTS_0121 IPR011527 ABC transporter type 1, transmembrane domain YPTS_0121 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_0121 IPR003439 ABC transporter-like YPTS_0121 IPR017871 ABC transporter, conserved site YPTS_0121 IPR010128 ATPase, type I secretion system, PrtD YPTS_0121 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0122 IPR010129 Type I secretion membrane fusion protein, HlyD family YPTS_0122 IPR006144 Secretion protein HlyD, conserved site YPTS_0123 IPR006260 TonB/TolA, C-terminal YPTS_0123 IPR037682 TonB, C-terminal YPTS_0124 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTS_0124 IPR006258 Dihydrolipoamide dehydrogenase YPTS_0124 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0124 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTS_0124 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTS_0124 IPR023753 FAD/NAD(P)-binding domain YPTS_0124 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTS_0125 IPR036249 Thioredoxin-like superfamily YPTS_0125 IPR013740 Redoxin YPTS_0125 IPR002109 Glutaredoxin YPTS_0125 IPR037944 Peroxiredoxin-5-like YPTS_0125 IPR014025 Glutaredoxin subgroup YPTS_0125 IPR011906 Glutaredoxin domain YPTS_0125 IPR011767 Glutaredoxin active site YPTS_0126 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0126 IPR000847 Transcription regulator HTH, LysR YPTS_0126 IPR005119 LysR, substrate-binding YPTS_0126 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0127 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0127 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTS_0127 IPR023753 FAD/NAD(P)-binding domain YPTS_0127 IPR022962 Soluble pyridine nucleotide transhydrogenase YPTS_0127 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTS_0127 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTS_0129 IPR023764 Transcriptional repressor HTH, FabR YPTS_0129 IPR009057 Homeobox-like domain superfamily YPTS_0129 IPR001647 DNA-binding HTH domain, TetR-type YPTS_0130 IPR009867 Protein of unknown function DUF1422 YPTS_0131 IPR030391 RNA methyltransferase TrmA, conserved site YPTS_0131 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPTS_0131 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0131 IPR030390 RNA methyltransferase TrmA, active site YPTS_0131 IPR010280 (Uracil-5)-methyltransferase family YPTS_0132 IPR010917 TonB-dependent receptor, conserved site YPTS_0132 IPR039426 Vitamin B12 transporter BtuB-like YPTS_0132 IPR012910 TonB-dependent receptor, plug domain YPTS_0132 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_0132 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_0132 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_0132 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPTS_0133 IPR018187 Asp/Glu racemase, active site 1 YPTS_0133 IPR001920 Asp/Glu racemase YPTS_0133 IPR033134 Asp/Glu racemase, active site 2 YPTS_0133 IPR015942 Asp/Glu/hydantoin racemase YPTS_0133 IPR004391 Glutamate racemase YPTS_0136 IPR033893 ABC transporter periplasmic-binding protein YtfQ YPTS_0136 IPR028082 Periplasmic binding protein-like I YPTS_0136 IPR025997 Periplasmic binding protein YPTS_0137 IPR003439 ABC transporter-like YPTS_0137 IPR003593 AAA+ ATPase domain YPTS_0137 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0137 IPR017871 ABC transporter, conserved site YPTS_0138 IPR001851 ABC transporter, permease YPTS_0139 IPR001851 ABC transporter, permease YPTS_0140 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0140 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0140 IPR020890 Transcription regulator HTH, HdfR YPTS_0140 IPR005119 LysR, substrate-binding YPTS_0140 IPR000847 Transcription regulator HTH, LysR YPTS_0141 IPR007335 Protein of unknown function DUF413 YPTS_0142 IPR003593 AAA+ ATPase domain YPTS_0142 IPR004482 Mg chelatase-related protein YPTS_0142 IPR025158 Mg chelatase-related protein, C-terminal domain YPTS_0142 IPR000523 Magnesium chelatase ChlI domain YPTS_0142 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0142 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0142 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_0143 IPR000399 TPP-binding enzyme, conserved site YPTS_0143 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_0143 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTS_0143 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_0143 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTS_0143 IPR029061 Thiamin diphosphate-binding fold YPTS_0143 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_0143 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTS_0144 IPR002912 ACT domain YPTS_0145 IPR033939 Branched-chain aminotransferase YPTS_0145 IPR005785 Branched-chain amino acid aminotransferase I YPTS_0145 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPTS_0145 IPR018300 Aminotransferase, class IV, conserved site YPTS_0145 IPR001544 Aminotransferase class IV YPTS_0146 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPTS_0146 IPR037237 IlvD/EDD, N-terminal domain YPTS_0146 IPR004404 Dihydroxy-acid dehydratase YPTS_0146 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPTS_0146 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPTS_0147 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_0147 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTS_0147 IPR001721 Threonine dehydratase, ACT-like domain YPTS_0147 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_0147 IPR005787 Threonine dehydratase, biosynthetic YPTS_0147 IPR038110 Threonine dehydratase, ACT-like domain superfamily YPTS_0153 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0153 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0153 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain YPTS_0153 IPR005119 LysR, substrate-binding YPTS_0153 IPR000847 Transcription regulator HTH, LysR YPTS_0154 IPR036291 NAD(P)-binding domain superfamily YPTS_0154 IPR013116 Ketol-acid reductoisomerase, N-terminal YPTS_0154 IPR000506 Ketol-acid reductoisomerase, C-terminal YPTS_0154 IPR013023 Ketol-acid reductoisomerase YPTS_0154 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0154 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_0158 IPR035900 Colicin E immunity protein superfamily YPTS_0158 IPR000290 Colicin immunity protein/pyocin immunity protein YPTS_0159 IPR036302 Pyosin/cloacin translocation domain superfamily YPTS_0159 IPR037146 Colicin/pyocin, DNase domain superfamily YPTS_0159 IPR003615 HNH nuclease YPTS_0159 IPR003060 Pyocin S killer protein YPTS_0159 IPR016128 Pyosin/cloacin translocation domain YPTS_0160 IPR035900 Colicin E immunity protein superfamily YPTS_0160 IPR000290 Colicin immunity protein/pyocin immunity protein YPTS_0161 IPR024575 Cloacin colicin family YPTS_0161 IPR037146 Colicin/pyocin, DNase domain superfamily YPTS_0161 IPR024566 Colicin, receptor domain YPTS_0161 IPR036302 Pyosin/cloacin translocation domain superfamily YPTS_0161 IPR016128 Pyosin/cloacin translocation domain YPTS_0161 IPR003615 HNH nuclease YPTS_0162 IPR035900 Colicin E immunity protein superfamily YPTS_0162 IPR000290 Colicin immunity protein/pyocin immunity protein YPTS_0167 IPR018046 Pili assembly chaperone, conserved site YPTS_0167 IPR016147 Pili assembly chaperone, N-terminal YPTS_0167 IPR013783 Immunoglobulin-like fold YPTS_0167 IPR008962 PapD-like superfamily YPTS_0167 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_0167 IPR001829 Pili assembly chaperone, bacterial YPTS_0167 IPR016148 Pili assembly chaperone, C-terminal YPTS_0169 IPR037224 PapC, N-terminal domain superfamily YPTS_0169 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_0169 IPR018030 Fimbrial membrane usher, conserved site YPTS_0169 IPR025885 PapC, N-terminal domain YPTS_0169 IPR025949 PapC-like, C-terminal domain YPTS_0169 IPR000015 Outer membrane usher protein YPTS_0170 IPR008962 PapD-like superfamily YPTS_0170 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_0170 IPR016148 Pili assembly chaperone, C-terminal YPTS_0170 IPR018046 Pili assembly chaperone, conserved site YPTS_0170 IPR016147 Pili assembly chaperone, N-terminal YPTS_0170 IPR013783 Immunoglobulin-like fold YPTS_0170 IPR001829 Pili assembly chaperone, bacterial YPTS_0173 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPTS_0173 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTS_0175 IPR034739 UvrD/AddA helicase, N-terminal YPTS_0175 IPR014016 UvrD-like helicase, ATP-binding domain YPTS_0175 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0175 IPR013986 DExx box DNA helicase domain superfamily YPTS_0175 IPR014017 UvrD-like DNA helicase, C-terminal YPTS_0175 IPR005752 ATP-dependent DNA helicase Rep YPTS_0175 IPR000212 DNA helicase, UvrD/REP type YPTS_0176 IPR030673 Pyrophosphatase, GppA/Ppx-type YPTS_0176 IPR003695 Ppx/GppA phosphatase YPTS_0176 IPR022371 Exopolyphosphatase YPTS_0176 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase YPTS_0177 IPR001650 Helicase, C-terminal YPTS_0177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0177 IPR014014 RNA helicase, DEAD-box type, Q motif YPTS_0177 IPR023554 ATP-dependent RNA helicase RhlB type YPTS_0177 IPR011545 DEAD/DEAH box helicase domain YPTS_0177 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTS_0177 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0178 IPR005746 Thioredoxin YPTS_0178 IPR036249 Thioredoxin-like superfamily YPTS_0178 IPR017937 Thioredoxin, conserved site YPTS_0178 IPR013766 Thioredoxin domain YPTS_0179 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_0179 IPR003593 AAA+ ATPase domain YPTS_0179 IPR011113 Rho termination factor, RNA-binding domain YPTS_0179 IPR004665 Transcription termination factor Rho YPTS_0179 IPR041703 Transcription termination factor Rho, ATP binding domain YPTS_0179 IPR012340 Nucleic acid-binding, OB-fold YPTS_0179 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0179 IPR036269 Rho termination factor, N-terminal domain superfamily YPTS_0179 IPR011129 Cold shock domain YPTS_0179 IPR011112 Rho termination factor, N-terminal YPTS_0180 IPR000715 Glycosyl transferase, family 4 YPTS_0180 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPTS_0181 IPR032895 ECA polysaccharide chain length modulation protein WzzE YPTS_0181 IPR003856 Polysaccharide chain length determinant N-terminal domain YPTS_0182 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like YPTS_0182 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPTS_0182 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB YPTS_0183 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPTS_0183 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPTS_0183 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPTS_0183 IPR036291 NAD(P)-binding domain superfamily YPTS_0183 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPTS_0183 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPTS_0183 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC YPTS_0183 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPTS_0183 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0184 IPR036291 NAD(P)-binding domain superfamily YPTS_0184 IPR016040 NAD(P)-binding domain YPTS_0184 IPR005888 dTDP-glucose 4,6-dehydratase YPTS_0185 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_0185 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPTS_0185 IPR005835 Nucleotidyl transferase domain YPTS_0186 IPR000182 GNAT domain YPTS_0186 IPR020683 Ankyrin repeat-containing domain YPTS_0186 IPR002110 Ankyrin repeat YPTS_0186 IPR016181 Acyl-CoA N-acyltransferase YPTS_0186 IPR012752 dTDP-fucosamine acetyltransferase WecD YPTS_0187 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0187 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like YPTS_0187 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE YPTS_0187 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0187 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0187 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTS_0188 IPR032896 Lipid III flippase WzxE YPTS_0188 IPR002797 Polysaccharide biosynthesis protein YPTS_0189 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase YPTS_0190 IPR010691 Probable ECA polymerase WzyE YPTS_0191 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPTS_0191 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPTS_0192 IPR004841 Amino acid permease/ SLC12A domain YPTS_0192 IPR004840 Amino acid permease, conserved site YPTS_0193 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_0193 IPR019734 Tetratricopeptide repeat YPTS_0193 IPR013105 Tetratricopeptide repeat 2 YPTS_0193 IPR010817 HemY, N-terminal YPTS_0193 IPR005254 Heme biosynthesis-associated TPR protein YPTS_0193 IPR013026 Tetratricopeptide repeat-containing domain YPTS_0194 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPTS_0195 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily YPTS_0195 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPTS_0195 IPR039793 Uroporphyrinogen-III synthase YPTS_0196 IPR022417 Porphobilinogen deaminase, N-terminal YPTS_0196 IPR022418 Porphobilinogen deaminase, C-terminal YPTS_0196 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily YPTS_0196 IPR000860 Porphobilinogen deaminase YPTS_0196 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPTS_0197 IPR024685 Adenylate cyclase class-I, N-terminal domain YPTS_0197 IPR024686 Adenylate cyclase class-I, conserved site YPTS_0197 IPR000274 Adenylate cyclase, class-I YPTS_0199 IPR001207 Transposase, mutator type YPTS_0201 IPR002908 Frataxin/CyaY YPTS_0201 IPR020895 Frataxin conserved site YPTS_0201 IPR036524 Frataxin/CyaY superfamily YPTS_0202 IPR032831 Prokaryotic lipoprotein-attachment site YPTS_0203 IPR001653 Diaminopimelate epimerase, DapF YPTS_0203 IPR018510 Diaminopimelate epimerase, active site YPTS_0204 IPR007435 Protein of unknown function DUF484 YPTS_0204 IPR029016 GAF-like domain superfamily YPTS_0205 IPR023009 Tyrosine recombinase XerC/XerD YPTS_0205 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_0205 IPR011931 Tyrosine recombinase XerC YPTS_0205 IPR013762 Integrase-like, catalytic domain superfamily YPTS_0205 IPR002104 Integrase, catalytic domain YPTS_0205 IPR010998 Integrase/recombinase, N-terminal YPTS_0205 IPR004107 Integrase, SAM-like, N-terminal YPTS_0206 IPR023214 HAD superfamily YPTS_0206 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_0206 IPR006439 HAD hydrolase, subfamily IA YPTS_0206 IPR036412 HAD-like superfamily YPTS_0207 IPR014016 UvrD-like helicase, ATP-binding domain YPTS_0207 IPR034739 UvrD/AddA helicase, N-terminal YPTS_0207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0207 IPR000212 DNA helicase, UvrD/REP type YPTS_0207 IPR014017 UvrD-like DNA helicase, C-terminal YPTS_0207 IPR013986 DExx box DNA helicase domain superfamily YPTS_0207 IPR005753 DNA helicase, ATP-dependent, UvrD type YPTS_0209 IPR008322 Uncharacterised protein family UPF0261 YPTS_0210 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_0210 IPR013785 Aldolase-type TIM barrel YPTS_0210 IPR009215 TIM-barrel domain, IGPS-like YPTS_0213 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPTS_0213 IPR004488 Magnesium/cobalt transport protein CorA YPTS_0214 IPR004626 RarD protein YPTS_0214 IPR000620 EamA domain YPTS_0215 IPR003736 Phenylacetic acid degradation-related domain YPTS_0215 IPR006683 Thioesterase domain YPTS_0215 IPR029069 HotDog domain superfamily YPTS_0216 IPR003187 Phospholipase A1 YPTS_0216 IPR036541 Phospholipase A1 superfamily YPTS_0217 IPR002121 HRDC domain YPTS_0217 IPR011545 DEAD/DEAH box helicase domain YPTS_0217 IPR018982 RQC domain YPTS_0217 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0217 IPR010997 HRDC-like superfamily YPTS_0217 IPR001650 Helicase, C-terminal YPTS_0217 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0217 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPTS_0217 IPR004589 DNA helicase, ATP-dependent, RecQ type YPTS_0217 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0217 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPTS_0218 IPR004778 Homoserine/Threonine efflux protein YPTS_0218 IPR001123 Amino acid exporter protein, LeuE-type YPTS_0219 IPR004778 Homoserine/Threonine efflux protein YPTS_0219 IPR001123 Amino acid exporter protein, LeuE-type YPTS_0220 IPR029058 Alpha/Beta hydrolase fold YPTS_0220 IPR022742 Serine aminopeptidase, S33 YPTS_0221 IPR000150 Cof family YPTS_0221 IPR036412 HAD-like superfamily YPTS_0221 IPR023214 HAD superfamily YPTS_0221 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTS_0223 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTS_0223 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTS_0224 IPR007419 BFD-like [2Fe-2S]-binding domain YPTS_0224 IPR006076 FAD dependent oxidoreductase YPTS_0224 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0224 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTS_0224 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPTS_0224 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPTS_0225 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPTS_0225 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0225 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTS_0226 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPTS_0226 IPR009051 Alpha-helical ferredoxin YPTS_0226 IPR004017 Cysteine-rich domain YPTS_0226 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0226 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0227 IPR014894 Protein DcrB YPTS_0227 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPTS_0228 IPR003744 Queuosine precursor transporter YPTS_0229 IPR022931 Sulfur carrier protein TusA YPTS_0229 IPR001455 TusA-like domain YPTS_0229 IPR036868 TusA-like domain superfamily YPTS_0230 IPR036412 HAD-like superfamily YPTS_0230 IPR027256 P-type ATPase, subfamily IB YPTS_0230 IPR036163 Heavy metal-associated domain superfamily YPTS_0230 IPR006121 Heavy metal-associated domain, HMA YPTS_0230 IPR017969 Heavy-metal-associated, conserved site YPTS_0230 IPR023214 HAD superfamily YPTS_0230 IPR008250 P-type ATPase, A domain superfamily YPTS_0230 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_0230 IPR018303 P-type ATPase, phosphorylation site YPTS_0230 IPR023299 P-type ATPase, cytoplasmic domain N YPTS_0230 IPR001757 P-type ATPase YPTS_0231 IPR012506 YhhN-like YPTS_0234 IPR009525 Protein of unknown function DUF1145 YPTS_0235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0235 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_0235 IPR004398 RNA methyltransferase, RsmD YPTS_0236 IPR004390 Signal-recognition particle receptor FtsY YPTS_0236 IPR036225 SRP/SRP receptor, N-terminal YPTS_0236 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0236 IPR004390 Signal-recognition particle receptor FtsY YPTS_0236 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTS_0236 IPR013822 Signal recognition particle SRP54, helical bundle YPTS_0236 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0236 IPR003593 AAA+ ATPase domain YPTS_0236 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTS_0236 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTS_0236 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTS_0236 IPR003593 AAA+ ATPase domain YPTS_0236 IPR013822 Signal recognition particle SRP54, helical bundle YPTS_0236 IPR036225 SRP/SRP receptor, N-terminal YPTS_0237 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0237 IPR005286 Cell division protein FtsE, ATP-binding YPTS_0237 IPR017871 ABC transporter, conserved site YPTS_0237 IPR003439 ABC transporter-like YPTS_0237 IPR003593 AAA+ ATPase domain YPTS_0238 IPR040690 FtsX, extracellular domain YPTS_0238 IPR003838 ABC transporter permease protein domain YPTS_0238 IPR004513 Cell division protein FtsX YPTS_0239 IPR000943 RNA polymerase sigma-70 YPTS_0239 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPTS_0239 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_0239 IPR009042 RNA polymerase sigma-70 region 1.2 YPTS_0239 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0239 IPR014284 RNA polymerase sigma-70 like domain YPTS_0239 IPR007630 RNA polymerase sigma-70 region 4 YPTS_0239 IPR007627 RNA polymerase sigma-70 region 2 YPTS_0239 IPR013325 RNA polymerase sigma factor, region 2 YPTS_0240 IPR040448 PanZ, acetyltransferase (GNAT) domain YPTS_0240 IPR032900 PanD regulatory factor PanZ YPTS_0240 IPR016181 Acyl-CoA N-acyltransferase YPTS_0240 IPR000182 GNAT domain YPTS_0241 IPR028081 Leucine-binding protein domain YPTS_0241 IPR000709 Leu/Ile/Val-binding protein YPTS_0241 IPR028082 Periplasmic binding protein-like I YPTS_0242 IPR001851 ABC transporter, permease YPTS_0243 IPR001851 ABC transporter, permease YPTS_0243 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPTS_0244 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0244 IPR003593 AAA+ ATPase domain YPTS_0244 IPR003439 ABC transporter-like YPTS_0244 IPR017871 ABC transporter, conserved site YPTS_0244 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTS_0245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0245 IPR003439 ABC transporter-like YPTS_0245 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPTS_0245 IPR003593 AAA+ ATPase domain YPTS_0245 IPR017871 ABC transporter, conserved site YPTS_0255 IPR035906 MetI-like superfamily YPTS_0255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0256 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE YPTS_0256 IPR035906 MetI-like superfamily YPTS_0256 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0257 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_0257 IPR040582 MalK, OB fold domain YPTS_0257 IPR017871 ABC transporter, conserved site YPTS_0257 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC YPTS_0257 IPR003593 AAA+ ATPase domain YPTS_0257 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0257 IPR003439 ABC transporter-like YPTS_0258 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTS_0258 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTS_0259 IPR004776 Membrane transport protein YPTS_0262 IPR000620 EamA domain YPTS_0262 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPTS_0263 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0263 IPR005119 LysR, substrate-binding YPTS_0263 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain YPTS_0263 IPR000847 Transcription regulator HTH, LysR YPTS_0263 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0264 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPTS_0264 IPR038071 UROD/MetE-like superfamily YPTS_0264 IPR006276 Cobalamin-independent methionine synthase YPTS_0264 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPTS_0265 IPR002925 Dienelactone hydrolase YPTS_0265 IPR029058 Alpha/Beta hydrolase fold YPTS_0266 IPR035994 Nucleoside phosphorylase superfamily YPTS_0266 IPR000845 Nucleoside phosphorylase domain YPTS_0266 IPR010058 Uridine phosphorylase YPTS_0266 IPR018016 Nucleoside phosphorylase, conserved site YPTS_0268 IPR003706 CstA, N-terminal domain YPTS_0268 IPR025299 CstA, C-terminal domain YPTS_0269 IPR032818 DedA family YPTS_0269 IPR032816 SNARE associated Golgi protein YPTS_0270 IPR003798 DNA recombination RmuC YPTS_0271 IPR004033 UbiE/COQ5 methyltransferase YPTS_0271 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPTS_0271 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0272 IPR038989 Ubiquinone biosynthesis protein UbiJ YPTS_0272 IPR036527 SCP2 sterol-binding domain superfamily YPTS_0272 IPR003033 SCP2 sterol-binding domain YPTS_0273 IPR004147 UbiB domain YPTS_0273 IPR010232 Probable protein kinase UbiB YPTS_0273 IPR011009 Protein kinase-like domain superfamily YPTS_0274 IPR003369 Sec-independent protein translocase protein TatA/B/E YPTS_0274 IPR006312 Sec-independent protein translocase protein TatA/E YPTS_0275 IPR018448 Twin-arginine translocation protein TatB YPTS_0276 IPR002033 Sec-independent periplasmic protein translocase TatC YPTS_0276 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPTS_0277 IPR001130 TatD family YPTS_0277 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTS_0277 IPR024918 3'-5' ssDNA/RNA exonuclease TatD YPTS_0277 IPR032466 Metal-dependent hydrolase YPTS_0278 IPR001731 Delta-aminolevulinic acid dehydratase YPTS_0278 IPR013785 Aldolase-type TIM barrel YPTS_0278 IPR030656 Delta-aminolevulinic acid dehydratase, active site YPTS_0279 IPR010215 Transcription antitermination protein RfaH YPTS_0279 IPR036735 NusG, N-terminal domain superfamily YPTS_0279 IPR006645 NusG, N-terminal YPTS_0280 IPR002830 UbiD decarboxylyase family YPTS_0280 IPR023677 UbiD decarboxylyase, bacteria YPTS_0281 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_0281 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_0281 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_0281 IPR017938 Riboflavin synthase-like beta-barrel YPTS_0281 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_0282 IPR012805 Acetyl-CoA C-acyltransferase FadA YPTS_0282 IPR002155 Thiolase YPTS_0282 IPR020615 Thiolase, acyl-enzyme intermediate active site YPTS_0282 IPR020610 Thiolase, active site YPTS_0282 IPR016039 Thiolase-like YPTS_0282 IPR020613 Thiolase, conserved site YPTS_0282 IPR020616 Thiolase, N-terminal YPTS_0282 IPR020617 Thiolase, C-terminal YPTS_0283 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPTS_0283 IPR036291 NAD(P)-binding domain superfamily YPTS_0283 IPR012799 Fatty oxidation complex, alpha subunit FadB YPTS_0283 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTS_0283 IPR001753 Enoyl-CoA hydratase/isomerase YPTS_0283 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPTS_0283 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPTS_0283 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0283 IPR029045 ClpP/crotonase-like domain superfamily YPTS_0284 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTS_0284 IPR022846 Xaa-Pro dipeptidase YPTS_0284 IPR000994 Peptidase M24 YPTS_0284 IPR036005 Creatinase/aminopeptidase-like YPTS_0284 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTS_0285 IPR036956 Impact, N-terminal domain superfamily YPTS_0285 IPR023582 Impact family YPTS_0285 IPR015796 Impact family, bacterial/archaeal YPTS_0285 IPR001498 Impact, N-terminal YPTS_0285 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0285 IPR035647 EF-G domain III/V-like YPTS_0285 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPTS_0285 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPTS_0286 IPR003445 Cation transporter YPTS_0286 IPR004772 TrkH potassium transport family YPTS_0287 IPR029039 Flavoprotein-like superfamily YPTS_0287 IPR026816 Flavodoxin domain YPTS_0287 IPR001226 Flavodoxin, conserved site YPTS_0287 IPR008254 Flavodoxin/nitric oxide synthase YPTS_0290 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_0290 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTS_0290 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_0290 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily YPTS_0290 IPR006094 FAD linked oxidase, N-terminal YPTS_0290 IPR016166 FAD-binding domain, PCMH-type YPTS_0290 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPTS_0290 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPTS_0291 IPR013196 Helix-turn-helix, type 11 YPTS_0291 IPR008988 Transcriptional repressor, C-terminal YPTS_0291 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0291 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0291 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPTS_0291 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTS_0291 IPR003142 Biotin protein ligase, C-terminal YPTS_0291 IPR004409 Biotin operon repressor, helix-turn-helix domain YPTS_0291 IPR030855 Bifunctional ligase/repressor BirA YPTS_0292 IPR006083 Phosphoribulokinase/uridine kinase YPTS_0292 IPR004566 Pantothenate kinase YPTS_0292 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0293 IPR000182 GNAT domain YPTS_0293 IPR016181 Acyl-CoA N-acyltransferase YPTS_0296 IPR031157 Tr-type G domain, conserved site YPTS_0296 IPR005225 Small GTP-binding protein domain YPTS_0296 IPR000795 Transcription factor, GTP-binding domain YPTS_0296 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0296 IPR033720 Elongation factor Tu, domain 2 YPTS_0296 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTS_0296 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPTS_0296 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTS_0296 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_0296 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPTS_0296 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0297 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPTS_0297 IPR005807 SecE subunit of protein translocation complex, bacterial-like YPTS_0297 IPR038379 SecE superfamily YPTS_0298 IPR014722 Ribosomal protein L2, domain 2 YPTS_0298 IPR005824 KOW YPTS_0298 IPR008991 Translation protein SH3-like domain superfamily YPTS_0298 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPTS_0298 IPR001062 Transcription antitermination protein, NusG YPTS_0298 IPR006645 NusG, N-terminal YPTS_0298 IPR036735 NusG, N-terminal domain superfamily YPTS_0299 IPR020783 Ribosomal protein L11, C-terminal YPTS_0299 IPR006519 Ribosomal protein L11, bacterial-type YPTS_0299 IPR000911 Ribosomal protein L11/L12 YPTS_0299 IPR020785 Ribosomal protein L11, conserved site YPTS_0299 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YPTS_0299 IPR020784 Ribosomal protein L11, N-terminal YPTS_0299 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YPTS_0300 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPTS_0300 IPR023673 Ribosomal protein L1, conserved site YPTS_0300 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPTS_0300 IPR023674 Ribosomal protein L1-like YPTS_0300 IPR005878 Ribosomal protein L1, bacterial-type YPTS_0300 IPR002143 Ribosomal protein L1 YPTS_0301 IPR001790 Ribosomal protein L10P YPTS_0301 IPR022973 Ribosomal protein L10 YPTS_0301 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPTS_0302 IPR000206 Ribosomal protein L7/L12 YPTS_0302 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTS_0302 IPR013823 Ribosomal protein L7/L12, C-terminal YPTS_0302 IPR008932 Ribosomal protein L7/L12, oligomerisation YPTS_0302 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily YPTS_0304 IPR007121 RNA polymerase, beta subunit, conserved site YPTS_0304 IPR014724 RNA polymerase Rpb2, OB-fold YPTS_0304 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type YPTS_0304 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily YPTS_0304 IPR007645 RNA polymerase Rpb2, domain 3 YPTS_0304 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain YPTS_0304 IPR015712 DNA-directed RNA polymerase, subunit 2 YPTS_0304 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPTS_0304 IPR037034 RNA polymerase Rpb2, domain 2 superfamily YPTS_0304 IPR007642 RNA polymerase Rpb2, domain 2 YPTS_0304 IPR007644 RNA polymerase, beta subunit, protrusion YPTS_0304 IPR007641 RNA polymerase Rpb2, domain 7 YPTS_0305 IPR042102 RNA polymerase Rpb1, domain 3 superfamily YPTS_0305 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPTS_0305 IPR000722 RNA polymerase, alpha subunit YPTS_0305 IPR038120 RNA polymerase Rpb1, funnel domain superfamily YPTS_0305 IPR007081 RNA polymerase Rpb1, domain 5 YPTS_0305 IPR007083 RNA polymerase Rpb1, domain 4 YPTS_0305 IPR007066 RNA polymerase Rpb1, domain 3 YPTS_0305 IPR007080 RNA polymerase Rpb1, domain 1 YPTS_0305 IPR006592 RNA polymerase, N-terminal YPTS_0306 IPR010722 Biotin and thiamin synthesis-associated domain YPTS_0306 IPR013785 Aldolase-type TIM barrel YPTS_0306 IPR012726 Thiazole biosynthesis ThiH YPTS_0306 IPR034428 ThiH/NocL/HydG-like YPTS_0306 IPR007197 Radical SAM YPTS_0307 IPR013785 Aldolase-type TIM barrel YPTS_0307 IPR008867 Thiazole synthase YPTS_0307 IPR033983 Thiazole synthase ThiG YPTS_0309 IPR035985 Ubiquitin-activating enzyme YPTS_0309 IPR000594 THIF-type NAD/FAD binding fold YPTS_0309 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF YPTS_0310 IPR036206 Thiamin phosphate synthase superfamily YPTS_0310 IPR013785 Aldolase-type TIM barrel YPTS_0310 IPR022998 Thiamine phosphate synthase/TenI YPTS_0310 IPR034291 Thiamine phosphate synthase YPTS_0311 IPR038521 ThiC/Bza superfamily YPTS_0311 IPR037509 Phosphomethylpyrimidine synthase YPTS_0311 IPR025747 ThiC-associated domain YPTS_0311 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B YPTS_0312 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPTS_0312 IPR038309 Rsd/AlgQ superfamily YPTS_0312 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPTS_0313 IPR020084 NUDIX hydrolase, conserved site YPTS_0313 IPR015376 Zinc ribbon, NADH pyrophosphatase YPTS_0313 IPR000086 NUDIX hydrolase domain YPTS_0313 IPR022925 NADH pyrophosphatase NudC YPTS_0313 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_0315 IPR038071 UROD/MetE-like superfamily YPTS_0315 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPTS_0315 IPR006361 Uroporphyrinogen decarboxylase HemE YPTS_0316 IPR007581 Endonuclease V YPTS_0317 IPR007338 Protein of unknown function DUF416 YPTS_0317 IPR023381 YP001051499.1-like domain superfamily YPTS_0318 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTS_0318 IPR000119 Histone-like DNA-binding protein YPTS_0318 IPR020816 Histone-like DNA-binding protein, conserved site YPTS_0319 IPR010858 Protein of unknown function DUF1481 YPTS_0319 IPR016500 Uncharacterised conserved protein UCP006993 YPTS_0320 IPR016185 Pre-ATP-grasp domain superfamily YPTS_0320 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPTS_0320 IPR011054 Rudiment single hybrid motif YPTS_0320 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily YPTS_0320 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPTS_0320 IPR000115 Phosphoribosylglycinamide synthetase YPTS_0320 IPR011761 ATP-grasp fold YPTS_0320 IPR013815 ATP-grasp fold, subdomain 1 YPTS_0320 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPTS_0320 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPTS_0321 IPR024051 AICAR transformylase, duplicated domain superfamily YPTS_0321 IPR016193 Cytidine deaminase-like YPTS_0321 IPR011607 Methylglyoxal synthase-like domain YPTS_0321 IPR002695 Bifunctional purine biosynthesis protein PurH-like YPTS_0321 IPR036914 Methylglyoxal synthase-like domain superfamily YPTS_0325 IPR002514 Transposase IS3/IS911family YPTS_0325 IPR009057 Homeobox-like domain superfamily YPTS_0326 IPR036397 Ribonuclease H superfamily YPTS_0326 IPR025948 HTH-like domain YPTS_0326 IPR012337 Ribonuclease H-like superfamily YPTS_0326 IPR001584 Integrase, catalytic core YPTS_0327 IPR003593 AAA+ ATPase domain YPTS_0327 IPR001270 ClpA/B family YPTS_0327 IPR002611 IstB-like ATP-binding protein YPTS_0327 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0327 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_0328 IPR001584 Integrase, catalytic core YPTS_0328 IPR017894 HTH domain, IS21 transposase-type YPTS_0328 IPR036397 Ribonuclease H superfamily YPTS_0328 IPR012337 Ribonuclease H-like superfamily YPTS_0328 IPR006120 Resolvase, HTH domain YPTS_0330 IPR018212 Sodium/solute symporter, conserved site YPTS_0330 IPR038377 Sodium/glucose symporter superfamily YPTS_0330 IPR001734 Sodium/solute symporter YPTS_0330 IPR014083 Cation/acetate symporter ActP YPTS_0331 IPR007436 Protein of unknown function DUF485 YPTS_0332 IPR025110 AMP-binding enzyme, C-terminal domain YPTS_0332 IPR020845 AMP-binding, conserved site YPTS_0332 IPR011904 Acetate-CoA ligase YPTS_0332 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain YPTS_0332 IPR000873 AMP-dependent synthetase/ligase YPTS_0332 IPR042099 AMP-dependent synthetase-like superfamily YPTS_0333 IPR018107 Sodium:dicarboxylate symporter, conserved site YPTS_0333 IPR036458 Sodium:dicarboxylate symporter superfamily YPTS_0333 IPR033380 Glutamate-aspartate symport protein GltP/GltT YPTS_0333 IPR034703 Proton/glutamate-aspartate symporter GltP YPTS_0333 IPR001991 Sodium:dicarboxylate symporter YPTS_0334 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0334 IPR000792 Transcription regulator LuxR, C-terminal YPTS_0334 IPR001789 Signal transduction response regulator, receiver domain YPTS_0334 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_0334 IPR011006 CheY-like superfamily YPTS_0335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0335 IPR019247 Histidine kinase BarA, N-terminal YPTS_0335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0335 IPR036641 HPT domain superfamily YPTS_0335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0335 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0335 IPR011006 CheY-like superfamily YPTS_0335 IPR001789 Signal transduction response regulator, receiver domain YPTS_0335 IPR005467 Histidine kinase domain YPTS_0335 IPR003660 HAMP domain YPTS_0335 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_0339 IPR009057 Homeobox-like domain superfamily YPTS_0339 IPR018062 HTH domain AraC-type, conserved site YPTS_0339 IPR018060 DNA binding HTH domain, AraC-type YPTS_0339 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like YPTS_0343 IPR006182 Secretory protein YscJ/FliF YPTS_0343 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPTS_0346 IPR042193 FHIPEP, domain 3 YPTS_0346 IPR042196 FHIPEP, domain 4 YPTS_0346 IPR025505 FHIPEP conserved site YPTS_0346 IPR001712 Type III secretion system FHIPEP YPTS_0346 IPR006302 Type III secretion protein HrcV YPTS_0347 IPR003593 AAA+ ATPase domain YPTS_0347 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0347 IPR013380 ATPase, type III secretion system, H+-transporting YPTS_0347 IPR005714 ATPase, type III secretion system, FliI/YscN YPTS_0347 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_0347 IPR040627 T3SS EscN ATPase, C-terminal YPTS_0350 IPR036429 SpoA-like superfamily YPTS_0350 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTS_0350 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPTS_0350 IPR001543 Surface presentation of antigen (SpoA) YPTS_0351 IPR005838 Type III secretion system inner membrane P protein YPTS_0351 IPR005773 Yop virulence translocation protein R YPTS_0352 IPR006306 Type III secretion protein HrpO YPTS_0352 IPR002191 Bacterial export protein family 3 YPTS_0353 IPR006304 Type III secretion protein SpaR/YscT YPTS_0353 IPR002010 Type III secretion system inner membrane R protein YPTS_0354 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPTS_0354 IPR006135 Type III secretion system substrate exporter YPTS_0354 IPR029025 Type III secretion system substrate exporter, C-terminal YPTS_0355 IPR007272 Sulphur transport domain YPTS_0356 IPR036868 TusA-like domain superfamily YPTS_0356 IPR001455 TusA-like domain YPTS_0357 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0357 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0357 IPR000847 Transcription regulator HTH, LysR YPTS_0357 IPR005119 LysR, substrate-binding YPTS_0358 IPR018227 Amino acid/polyamine transporter 2 YPTS_0359 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0359 IPR006233 Cystathionine beta-lyase, bacterial YPTS_0359 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTS_0359 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0359 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0360 IPR015863 ABC transporter, hemin import, HmuV YPTS_0360 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0360 IPR003439 ABC transporter-like YPTS_0360 IPR003593 AAA+ ATPase domain YPTS_0360 IPR017871 ABC transporter, conserved site YPTS_0361 IPR037294 ABC transporter, BtuC-like YPTS_0361 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_0362 IPR002491 ABC transporter periplasmic binding domain YPTS_0363 IPR007845 Haemin-degrading HemS/ChuX domain YPTS_0364 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPTS_0364 IPR010916 TonB box, conserved site YPTS_0364 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_0364 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_0364 IPR012910 TonB-dependent receptor, plug domain YPTS_0364 IPR039426 Vitamin B12 transporter BtuB-like YPTS_0364 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_0364 IPR011276 TonB-dependent haem/haemoglobin receptor YPTS_0365 IPR019600 Hemin uptake protein HemP YPTS_0366 IPR016040 NAD(P)-binding domain YPTS_0366 IPR036291 NAD(P)-binding domain superfamily YPTS_0367 IPR010413 Intracellular heme transport protein HutX-like YPTS_0368 IPR006638 Elp3/MiaB/NifB YPTS_0368 IPR026332 Anaerobilin synthase HutW YPTS_0368 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTS_0368 IPR007197 Radical SAM YPTS_0368 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_0370 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPTS_0372 IPR011215 Phosphoribosyl transferase YPTS_0372 IPR028157 PELOTA RNA-binding domain YPTS_0376 IPR003325 TerD domain YPTS_0377 IPR017115 Tellurite resistance, TerA YPTS_0377 IPR003325 TerD domain YPTS_0378 IPR007791 Co-chaperone DjlA, N-terminal YPTS_0378 IPR029024 TerB-like YPTS_0379 IPR005496 Integral membrane protein TerC YPTS_0379 IPR022369 Integral membrane protein TerC, riboswitch-linked YPTS_0380 IPR003325 TerD domain YPTS_0381 IPR003325 TerD domain YPTS_0383 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_0383 IPR000015 Outer membrane usher protein YPTS_0383 IPR025885 PapC, N-terminal domain YPTS_0383 IPR037224 PapC, N-terminal domain superfamily YPTS_0383 IPR025949 PapC-like, C-terminal domain YPTS_0384 IPR016147 Pili assembly chaperone, N-terminal YPTS_0384 IPR013783 Immunoglobulin-like fold YPTS_0384 IPR008962 PapD-like superfamily YPTS_0384 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_0387 IPR016166 FAD-binding domain, PCMH-type YPTS_0387 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_0387 IPR006094 FAD linked oxidase, N-terminal YPTS_0387 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_0387 IPR012951 Berberine/berberine-like YPTS_0388 IPR036709 Autotransporter beta-domain superfamily YPTS_0388 IPR011050 Pectin lyase fold/virulence factor YPTS_0388 IPR005546 Autotransporter beta-domain YPTS_0388 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_0388 IPR006315 Outer membrane autotransporter barrel YPTS_0388 IPR013425 Autotransporter-associated beta strand repeat YPTS_0389 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTS_0389 IPR007440 Chorismate--pyruvate lyase YPTS_0390 IPR000537 UbiA prenyltransferase family YPTS_0390 IPR039653 Prenyltransferase YPTS_0390 IPR006370 4-hydroxybenzoate polyprenyltransferase-like YPTS_0390 IPR030470 UbiA prenyltransferase conserved site YPTS_0391 IPR002123 Phospholipid/glycerol acyltransferase YPTS_0391 IPR041728 GPAT/DHAPAT, acyltransferase domain YPTS_0391 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPTS_0391 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPTS_0392 IPR000829 DAGK family YPTS_0392 IPR033718 Diacylglycerol kinase, prokaryotic YPTS_0392 IPR036945 Diacylglycerol kinase (DAGK) superfamily YPTS_0393 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0393 IPR039418 LexA-like YPTS_0393 IPR036286 LexA/Signal peptidase-like superfamily YPTS_0393 IPR006199 LexA repressor, DNA-binding domain YPTS_0393 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0393 IPR006197 Peptidase S24, LexA-like YPTS_0393 IPR015927 Peptidase S24/S26A/S26B/S26C YPTS_0393 IPR006200 Transcription regulator LexA YPTS_0394 IPR002481 Ferric-uptake regulator YPTS_0394 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0394 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0395 IPR013785 Aldolase-type TIM barrel YPTS_0395 IPR035587 DUS-like, FMN-binding domain YPTS_0395 IPR004653 tRNA-dihydrouridine(20/20a) synthase YPTS_0395 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTS_0395 IPR001269 tRNA-dihydrouridine synthase YPTS_0396 IPR014318 Phage shock protein, PspG YPTS_0397 IPR011032 GroES-like superfamily YPTS_0397 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_0397 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_0397 IPR036291 NAD(P)-binding domain superfamily YPTS_0397 IPR020843 Polyketide synthase, enoylreductase domain YPTS_0397 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPTS_0398 IPR003593 AAA+ ATPase domain YPTS_0398 IPR007693 DNA helicase, DnaB-like, N-terminal YPTS_0398 IPR007694 DNA helicase, DnaB-like, C-terminal YPTS_0398 IPR007692 DNA helicase, DnaB type YPTS_0398 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily YPTS_0398 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTS_0398 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0399 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPTS_0399 IPR029066 PLP-binding barrel YPTS_0399 IPR000821 Alanine racemase YPTS_0399 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTS_0399 IPR011079 Alanine racemase, C-terminal YPTS_0399 IPR001608 Alanine racemase, N-terminal YPTS_0400 IPR004839 Aminotransferase, class I/classII YPTS_0400 IPR000796 Aspartate/other aminotransferase YPTS_0400 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPTS_0400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0400 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0401 IPR038056 YjbR-like superfamily YPTS_0401 IPR007351 Uncharacterised protein YjbR YPTS_0402 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0402 IPR041552 UvrA DNA-binding domain YPTS_0402 IPR004602 UvrABC system subunit A YPTS_0402 IPR003439 ABC transporter-like YPTS_0402 IPR041102 UvrA, interaction domain YPTS_0402 IPR017871 ABC transporter, conserved site YPTS_0403 IPR000424 Primosome PriB/single-strand DNA-binding YPTS_0403 IPR011344 Single-stranded DNA-binding protein YPTS_0403 IPR012340 Nucleic acid-binding, OB-fold YPTS_0404 IPR011008 Dimeric alpha-beta barrel YPTS_0404 IPR008000 Rhamnose/fucose mutarotase YPTS_0404 IPR013448 L-rhamnose mutarotase YPTS_0405 IPR039697 Iron-type alcohol dehydrogenase-like YPTS_0405 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTS_0405 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTS_0406 IPR001303 Class II aldolase/adducin N-terminal YPTS_0406 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_0406 IPR013447 Rhamnulose-1-phosphate aldolase YPTS_0407 IPR036237 Xylose isomerase-like superfamily YPTS_0407 IPR009308 Rhamnose isomerase YPTS_0408 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_0408 IPR000577 Carbohydrate kinase, FGGY YPTS_0408 IPR013449 Rhamnulokinase YPTS_0408 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_0411 IPR009057 Homeobox-like domain superfamily YPTS_0411 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTS_0411 IPR020449 Transcription regulator HTH, AraC- type YPTS_0411 IPR037923 Transcription regulator HTH-like YPTS_0411 IPR018060 DNA binding HTH domain, AraC-type YPTS_0411 IPR018062 HTH domain AraC-type, conserved site YPTS_0411 IPR023609 Transcription regulator HTH, RhaS YPTS_0411 IPR014710 RmlC-like jelly roll fold YPTS_0412 IPR009057 Homeobox-like domain superfamily YPTS_0412 IPR018060 DNA binding HTH domain, AraC-type YPTS_0412 IPR018062 HTH domain AraC-type, conserved site YPTS_0412 IPR014710 RmlC-like jelly roll fold YPTS_0412 IPR020449 Transcription regulator HTH, AraC- type YPTS_0412 IPR023699 Transcription activator HTH, RhaR YPTS_0412 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTS_0412 IPR011051 RmlC-like cupin domain superfamily YPTS_0413 IPR004673 L-rhamnose-proton symport, RhaT YPTS_0415 IPR005063 Transposase, IS1 YPTS_0416 IPR008992 Enterotoxin YPTS_0421 IPR009057 Homeobox-like domain superfamily YPTS_0421 IPR001647 DNA-binding HTH domain, TetR-type YPTS_0421 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_0422 IPR028261 Dihydroprymidine dehydrogenase domain II YPTS_0422 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0422 IPR009051 Alpha-helical ferredoxin YPTS_0422 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0422 IPR023753 FAD/NAD(P)-binding domain YPTS_0422 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPTS_0422 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0423 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0423 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0424 IPR006656 Molybdopterin oxidoreductase YPTS_0424 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_0424 IPR006478 Formate dehydrogenase, alpha subunit YPTS_0424 IPR041924 Formate dehydrogenase H, N-terminal YPTS_0424 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain YPTS_0424 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_0424 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTS_0424 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_0424 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_0425 IPR022910 Thiol:disulphide interchange protein DsbD YPTS_0425 IPR013766 Thioredoxin domain YPTS_0425 IPR017937 Thioredoxin, conserved site YPTS_0425 IPR036249 Thioredoxin-like superfamily YPTS_0425 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YPTS_0425 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPTS_0425 IPR003834 Cytochrome C biogenesis protein, transmembrane domain YPTS_0425 IPR035671 DsbD gamma YPTS_0426 IPR004323 Divalent ion tolerance protein, CutA YPTS_0426 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria YPTS_0426 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTS_0426 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTS_0427 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPTS_0428 IPR000362 Fumarate lyase family YPTS_0428 IPR018951 Fumarase C, C-terminal YPTS_0428 IPR008948 L-Aspartase-like YPTS_0428 IPR024083 Fumarase/histidase, N-terminal YPTS_0428 IPR004708 Aspartate ammonia-lyase YPTS_0428 IPR020557 Fumarate lyase, conserved site YPTS_0428 IPR022761 Fumarate lyase, N-terminal YPTS_0429 IPR007313 FxsA cytoplasmic membrane protein YPTS_0430 IPR037124 GroES chaperonin superfamily YPTS_0430 IPR020818 GroES chaperonin family YPTS_0430 IPR011032 GroES-like superfamily YPTS_0430 IPR018369 Chaperonin GroES, conserved site YPTS_0431 IPR027413 GroEL-like equatorial domain superfamily YPTS_0431 IPR027409 GroEL-like apical domain superfamily YPTS_0431 IPR002423 Chaperonin Cpn60/TCP-1 family YPTS_0431 IPR001844 Chaperonin Cpn60 YPTS_0431 IPR018370 Chaperonin Cpn60, conserved site YPTS_0431 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YPTS_0432 IPR025294 Protein of unknown function DUF4156 YPTS_0433 IPR022462 Lysine-2,3-aminomutase-like YPTS_0433 IPR007197 Radical SAM YPTS_0433 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPTS_0433 IPR013785 Aldolase-type TIM barrel YPTS_0434 IPR001059 Translation elongation factor P/YeiP, central YPTS_0434 IPR011768 Translation elongation factor P YPTS_0434 IPR012340 Nucleic acid-binding, OB-fold YPTS_0434 IPR008991 Translation protein SH3-like domain superfamily YPTS_0434 IPR013185 Translation elongation factor, KOW-like YPTS_0434 IPR020599 Translation elongation factor P/YeiP YPTS_0434 IPR013852 Translation elongation factor P/YeiP, conserved site YPTS_0434 IPR014722 Ribosomal protein L2, domain 2 YPTS_0434 IPR015365 Elongation factor P, C-terminal YPTS_0435 IPR000390 Small multidrug resistance protein family YPTS_0436 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTS_0436 IPR003418 Fumarate reductase, subunit D YPTS_0437 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTS_0437 IPR003510 Fumarate reductase, subunit C YPTS_0438 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPTS_0438 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_0438 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTS_0438 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0438 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0438 IPR012675 Beta-grasp domain superfamily YPTS_0438 IPR009051 Alpha-helical ferredoxin YPTS_0438 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_0438 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPTS_0439 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTS_0439 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0439 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTS_0439 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPTS_0439 IPR005884 Fumarate reductase, flavoprotein subunit YPTS_0439 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPTS_0439 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTS_0439 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTS_0440 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPTS_0440 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_0440 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTS_0440 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPTS_0441 IPR010920 LSM domain superfamily YPTS_0441 IPR006685 Mechanosensitive ion channel MscS YPTS_0441 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTS_0441 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTS_0441 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTS_0441 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTS_0441 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTS_0441 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTS_0442 IPR033177 Phosphatidylserine decarboxylase YPTS_0442 IPR003817 Phosphatidylserine decarboxylase-related YPTS_0442 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 YPTS_0443 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain YPTS_0443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0443 IPR004881 Ribosome biogenesis GTPase RsgA YPTS_0443 IPR010914 RsgA GTPase domain YPTS_0444 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTS_0444 IPR012337 Ribonuclease H-like superfamily YPTS_0444 IPR036397 Ribonuclease H superfamily YPTS_0444 IPR022894 Oligoribonuclease YPTS_0447 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0447 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0447 IPR013542 Domain of unknown function DUF1730 YPTS_0447 IPR009051 Alpha-helical ferredoxin YPTS_0447 IPR004453 Epoxyqueuosine reductase QueG YPTS_0448 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr YPTS_0448 IPR017953 Carbohydrate kinase, predicted, conserved site YPTS_0448 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase YPTS_0448 IPR029056 Ribokinase-like YPTS_0448 IPR004443 YjeF N-terminal domain YPTS_0448 IPR036652 YjeF N-terminal domain superfamily YPTS_0449 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0449 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPTS_0450 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPTS_0451 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_0451 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0451 IPR020667 DNA mismatch repair protein, MutL YPTS_0451 IPR002099 DNA mismatch repair protein family, N-terminal YPTS_0451 IPR037198 MutL, C-terminal domain superfamily YPTS_0451 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPTS_0451 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0451 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPTS_0451 IPR014790 MutL, C-terminal, dimerisation YPTS_0451 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPTS_0451 IPR042121 MutL, C-terminal domain, regulatory subdomain YPTS_0451 IPR014762 DNA mismatch repair, conserved site YPTS_0452 IPR039657 Dimethylallyltransferase YPTS_0452 IPR018022 IPP transferase YPTS_0452 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0453 IPR005001 RNA-binding protein Hfq YPTS_0453 IPR010920 LSM domain superfamily YPTS_0455 IPR025121 GTPase HflX, N-terminal YPTS_0455 IPR016496 GTPase HflX YPTS_0455 IPR006073 GTP binding domain YPTS_0455 IPR032305 GTP-binding protein, middle domain YPTS_0455 IPR035647 EF-G domain III/V-like YPTS_0455 IPR030394 HflX-type guanine nucleotide-binding (G) domain YPTS_0455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0455 IPR042108 GTPase HflX, N-terminal domain superfamily YPTS_0456 IPR001972 Stomatin family YPTS_0456 IPR020980 Menbrane protein HflK, N-terminal YPTS_0456 IPR001107 Band 7 domain YPTS_0456 IPR036013 Band 7/SPFH domain superfamily YPTS_0456 IPR010201 HflK YPTS_0457 IPR001107 Band 7 domain YPTS_0457 IPR036013 Band 7/SPFH domain superfamily YPTS_0457 IPR010200 HflC YPTS_0458 IPR019201 Protein of unknown function DUF2065 YPTS_0459 IPR033128 Adenylosuccinate synthase, active site YPTS_0459 IPR042109 Adenylosuccinate synthetase, domain 1 YPTS_0459 IPR042110 Adenylosuccinate synthetase, domain 2 YPTS_0459 IPR042111 Adenylosuccinate synthetase, domain 3 YPTS_0459 IPR001114 Adenylosuccinate synthetase YPTS_0459 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0459 IPR018220 Adenylosuccinate synthase, GTP-binding site YPTS_0460 IPR000944 Transcription regulator Rrf2-type YPTS_0460 IPR023761 Transcriptional repressor HTH, NsrR YPTS_0460 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0460 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0460 IPR030489 Transcription regulator Rrf2-type, conserved site YPTS_0461 IPR004476 Ribonuclease II/ribonuclease R YPTS_0461 IPR012340 Nucleic acid-binding, OB-fold YPTS_0461 IPR013223 Ribonuclease B, N-terminal OB domain YPTS_0461 IPR001900 Ribonuclease II/R YPTS_0461 IPR022966 Ribonuclease II/R, conserved site YPTS_0461 IPR011129 Cold shock domain YPTS_0461 IPR022967 RNA-binding domain, S1 YPTS_0461 IPR040476 RNase II/RNase R, cold shock domain YPTS_0461 IPR013668 Ribonuclease R winged-helix domain YPTS_0461 IPR011805 Ribonuclease R YPTS_0461 IPR003029 S1 domain YPTS_0462 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_0462 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTS_0462 IPR004441 RNA methyltransferase TrmH family YPTS_0462 IPR029064 50S ribosomal protein L30e-like YPTS_0462 IPR029028 Alpha/beta knot methyltransferases YPTS_0462 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPTS_0462 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPTS_0464 IPR034184 Putative acyl-CoA dehydrogenase AidB YPTS_0464 IPR041504 Adaptive response protein AidB, N-terminal YPTS_0464 IPR006089 Acyl-CoA dehydrogenase, conserved site YPTS_0464 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTS_0464 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTS_0464 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPTS_0464 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTS_0465 IPR036275 YdgH-like superfamily YPTS_0465 IPR010854 Domain of unknown function DUF1471 YPTS_0465 IPR025543 Dodecin-like YPTS_0466 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPTS_0466 IPR029058 Alpha/Beta hydrolase fold YPTS_0468 IPR020815 Ribosomal protein S6, conserved site YPTS_0468 IPR020814 Ribosomal protein S6, plastid/chloroplast YPTS_0468 IPR000529 Ribosomal protein S6 YPTS_0468 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPTS_0468 IPR035980 Ribosomal protein S6 superfamily YPTS_0469 IPR012340 Nucleic acid-binding, OB-fold YPTS_0469 IPR000424 Primosome PriB/single-strand DNA-binding YPTS_0469 IPR023646 Primosomal replication protein PriB YPTS_0470 IPR018275 Ribosomal protein S18, conserved site YPTS_0470 IPR001648 Ribosomal protein S18 YPTS_0470 IPR036870 Ribosomal protein S18 superfamily YPTS_0471 IPR036935 Ribosomal protein L9, N-terminal domain superfamily YPTS_0471 IPR000244 Ribosomal protein L9 YPTS_0471 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPTS_0471 IPR020070 Ribosomal protein L9, N-terminal YPTS_0471 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YPTS_0471 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPTS_0471 IPR020069 Ribosomal protein L9, C-terminal YPTS_0473 IPR013731 Opacity-associated protein A, N-terminal YPTS_0473 IPR007340 Opacity-associated protein A YPTS_0474 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPTS_0474 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTS_0474 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPTS_0475 IPR023742 Iron-sulfur cluster repair protein YftE YPTS_0475 IPR012312 Haemerythrin-like YPTS_0475 IPR019903 Repair of iron centres family YPTS_0476 IPR006179 5'-Nucleotidase/apyrase YPTS_0476 IPR008334 5'-Nucleotidase, C-terminal YPTS_0476 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPTS_0476 IPR006146 5'-Nucleotidase, conserved site YPTS_0476 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTS_0476 IPR041827 CpdB, N-terminal metallophosphatase domain YPTS_0476 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPTS_0476 IPR029052 Metallo-dependent phosphatase-like YPTS_0477 IPR020583 Inositol monophosphatase, metal-binding site YPTS_0477 IPR000760 Inositol monophosphatase-like YPTS_0477 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ YPTS_0477 IPR020550 Inositol monophosphatase, conserved site YPTS_0478 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPTS_0479 IPR009491 Protein of unknown function DUF1107 YPTS_0480 IPR002550 CNNM, transmembrane domain YPTS_0480 IPR000644 CBS domain YPTS_0480 IPR005170 Transporter-associated domain YPTS_0480 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_0480 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_0481 IPR002569 Peptide methionine sulphoxide reductase MsrA YPTS_0481 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily YPTS_0482 IPR035243 TamA, POTRA domain 1 YPTS_0482 IPR034746 POTRA domain YPTS_0482 IPR000184 Bacterial surface antigen (D15) YPTS_0482 IPR010827 POTRA domain, BamA/TamA-like YPTS_0482 IPR039910 Surface antigen D15-like YPTS_0483 IPR007452 Translocation and assembly module TamB YPTS_0484 IPR013024 Gamma-glutamyl cyclotransferase-like YPTS_0484 IPR039126 Gamma-glutamylaminecyclotransferase YPTS_0484 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPTS_0484 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily YPTS_0485 IPR008162 Inorganic pyrophosphatase YPTS_0485 IPR036649 Inorganic pyrophosphatase superfamily YPTS_0486 IPR028343 Fructose-1,6-bisphosphatase YPTS_0486 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal YPTS_0486 IPR020548 Fructose-1,6-bisphosphatase, active site YPTS_0486 IPR000146 Fructose-1,6-bisphosphatase class 1 YPTS_0487 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_0487 IPR013221 Mur ligase, central YPTS_0487 IPR004101 Mur ligase, C-terminal YPTS_0487 IPR036565 Mur-like, catalytic domain superfamily YPTS_0487 IPR000713 Mur ligase, N-terminal catalytic domain YPTS_0487 IPR005757 Murein peptide ligase YPTS_0489 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0489 IPR020900 Arginine repressor, DNA-binding domain YPTS_0489 IPR036251 Arginine repressor, C-terminal domain superfamily YPTS_0489 IPR020899 Arginine repressor, C-terminal YPTS_0489 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0489 IPR001669 Arginine repressor YPTS_0490 IPR001557 L-lactate/malate dehydrogenase YPTS_0490 IPR023958 Malate dehydrogenase, type 1, bacterial YPTS_0490 IPR036291 NAD(P)-binding domain superfamily YPTS_0490 IPR001236 Lactate/malate dehydrogenase, N-terminal YPTS_0490 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPTS_0490 IPR022383 Lactate/malate dehydrogenase, C-terminal YPTS_0490 IPR001252 Malate dehydrogenase, active site YPTS_0490 IPR010097 Malate dehydrogenase, type 1 YPTS_0491 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPTS_0491 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_0493 IPR033749 Polyprenyl synthetase, conserved site YPTS_0493 IPR000092 Polyprenyl synthetase YPTS_0493 IPR008949 Isoprenoid synthase domain superfamily YPTS_0494 IPR001787 Ribosomal protein L21 YPTS_0494 IPR018258 Ribosomal protein L21, conserved site YPTS_0494 IPR028909 Ribosomal protein L21-like YPTS_0494 IPR036164 L21-like superfamily YPTS_0495 IPR018261 Ribosomal protein L27, conserved site YPTS_0495 IPR001684 Ribosomal protein L27 YPTS_0496 IPR000620 EamA domain YPTS_0497 IPR006169 GTP1/OBG domain YPTS_0497 IPR006074 GTP1/OBG, conserved site YPTS_0497 IPR014100 GTP-binding protein Obg/CgtA YPTS_0497 IPR036726 GTP1/OBG domain superfamily YPTS_0497 IPR035101 GTP-binding protein, Obg-type YPTS_0497 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0497 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPTS_0497 IPR006073 GTP binding domain YPTS_0498 IPR003660 HAMP domain YPTS_0498 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0498 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0498 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0498 IPR005467 Histidine kinase domain YPTS_0498 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0498 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0499 IPR011006 CheY-like superfamily YPTS_0499 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_0499 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0499 IPR039420 Transcriptional regulatory protein WalR-like YPTS_0499 IPR001789 Signal transduction response regulator, receiver domain YPTS_0500 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPTS_0500 IPR012338 Beta-lactamase/transpeptidase-like YPTS_0501 IPR006359 Transcription elongation factor GreA YPTS_0501 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTS_0501 IPR023459 Transcription elongation factor GreA/GreB family YPTS_0501 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPTS_0501 IPR028624 Transcription elongation factor GreA/GreB YPTS_0501 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTS_0501 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPTS_0501 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPTS_0502 IPR001890 RNA-binding, CRM domain YPTS_0502 IPR035920 YhbY-like superfamily YPTS_0502 IPR017924 RNA-binding protein YhbY YPTS_0503 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0503 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPTS_0503 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPTS_0503 IPR015507 Ribosomal RNA large subunit methyltransferase E YPTS_0504 IPR037219 Peptidase M41-like YPTS_0504 IPR041569 AAA ATPase, AAA+ lid domain YPTS_0504 IPR003959 ATPase, AAA-type, core YPTS_0504 IPR003960 ATPase, AAA-type, conserved site YPTS_0504 IPR000642 Peptidase M41 YPTS_0504 IPR011546 Peptidase M41, FtsH extracellular YPTS_0504 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0504 IPR005936 Peptidase, FtsH YPTS_0504 IPR003593 AAA+ ATPase domain YPTS_0505 IPR011005 Dihydropteroate synthase-like YPTS_0505 IPR006390 Dihydropteroate synthase YPTS_0505 IPR000489 Pterin-binding domain YPTS_0506 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTS_0506 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTS_0506 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTS_0506 IPR005841 Alpha-D-phosphohexomutase superfamily YPTS_0506 IPR006352 Phosphoglucosamine mutase, bacterial type YPTS_0506 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTS_0506 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTS_0506 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTS_0506 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTS_0507 IPR004692 Preprotein translocase SecG subunit YPTS_0508 IPR035956 RimP, N-terminal domain superfamily YPTS_0508 IPR028989 Ribosome maturation factor RimP, N-terminal YPTS_0508 IPR028998 Ribosome maturation factor RimP, C-terminal YPTS_0508 IPR003728 Ribosome maturation factor RimP YPTS_0508 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YPTS_0509 IPR022967 RNA-binding domain, S1 YPTS_0509 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPTS_0509 IPR015946 K homology domain-like, alpha/beta YPTS_0509 IPR025249 KH domain, NusA-like YPTS_0509 IPR009019 K homology domain superfamily, prokaryotic type YPTS_0509 IPR012340 Nucleic acid-binding, OB-fold YPTS_0509 IPR030842 Transcription termination/antitermination protein NusA, bacterial YPTS_0509 IPR036555 NusA, N-terminal domain superfamily YPTS_0509 IPR013735 Transcription factor NusA, N-terminal YPTS_0509 IPR003029 S1 domain YPTS_0509 IPR010213 Transcription termination factor NusA YPTS_0509 IPR010214 Transcription termination factor NusA, C-terminal duplication YPTS_0510 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YPTS_0510 IPR023115 Translation initiation factor IF- 2, domain 3 YPTS_0510 IPR009061 Putative DNA-binding domain superfamily YPTS_0510 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_0510 IPR013575 Initiation factor 2 associated domain, bacterial YPTS_0510 IPR006847 Translation initiation factor IF-2, N-terminal YPTS_0510 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0510 IPR015760 Translation initiation factor IF- 2 YPTS_0510 IPR005225 Small GTP-binding protein domain YPTS_0510 IPR000795 Transcription factor, GTP-binding domain YPTS_0510 IPR000178 Translation initiation factor aIF-2, bacterial-like YPTS_0510 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0511 IPR020053 Ribosome-binding factor A, conserved site YPTS_0511 IPR023799 Ribosome-binding factor A domain superfamily YPTS_0511 IPR000238 Ribosome-binding factor A YPTS_0511 IPR015946 K homology domain-like, alpha/beta YPTS_0512 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPTS_0512 IPR015947 PUA-like superfamily YPTS_0512 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPTS_0512 IPR014780 tRNA pseudouridine synthase II, TruB YPTS_0512 IPR036974 PUA domain superfamily YPTS_0512 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_0512 IPR002501 Pseudouridine synthase II, N-terminal YPTS_0513 IPR005290 Ribosomal protein S15, bacterial-type YPTS_0513 IPR000589 Ribosomal protein S15 YPTS_0513 IPR009068 S15/NS1, RNA-binding YPTS_0514 IPR004088 K Homology domain, type 1 YPTS_0514 IPR012340 Nucleic acid-binding, OB-fold YPTS_0514 IPR036612 K Homology domain, type 1 superfamily YPTS_0514 IPR004087 K Homology domain YPTS_0514 IPR036345 Exoribonuclease, PH domain 2 superfamily YPTS_0514 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPTS_0514 IPR012162 Polyribonucleotide nucleotidyltransferase YPTS_0514 IPR027408 PNPase/RNase PH domain superfamily YPTS_0514 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPTS_0514 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPTS_0514 IPR003029 S1 domain YPTS_0514 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily YPTS_0514 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0514 IPR022967 RNA-binding domain, S1 YPTS_0515 IPR013105 Tetratricopeptide repeat 2 YPTS_0515 IPR019734 Tetratricopeptide repeat YPTS_0515 IPR023605 Lipoprotein NlpI YPTS_0515 IPR013026 Tetratricopeptide repeat-containing domain YPTS_0515 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_0516 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0516 IPR001650 Helicase, C-terminal YPTS_0516 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTS_0516 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0516 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTS_0516 IPR014014 RNA helicase, DEAD-box type, Q motif YPTS_0516 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPTS_0516 IPR034415 CsdA, RNA recognition motif YPTS_0516 IPR028618 ATP-dependent RNA helicase DeaD YPTS_0516 IPR011545 DEAD/DEAH box helicase domain YPTS_0516 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPTS_0518 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_0518 IPR001387 Cro/C1-type helix-turn-helix domain YPTS_0520 IPR036661 Luciferase-like domain superfamily YPTS_0520 IPR019949 Luciferase family oxidoreductase, group 1 YPTS_0520 IPR011251 Luciferase-like domain YPTS_0521 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_0521 IPR006143 RND efflux pump, membrane fusion protein YPTS_0522 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_0522 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTS_0522 IPR001036 Acriflavin resistance protein YPTS_0523 IPR003423 Outer membrane efflux protein YPTS_0523 IPR012640 Membrane lipoprotein, lipid attachment site YPTS_0523 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPTS_0527 IPR000182 GNAT domain YPTS_0527 IPR016181 Acyl-CoA N-acyltransferase YPTS_0528 IPR000305 GIY-YIG endonuclease YPTS_0528 IPR035901 GIY-YIG endonuclease superfamily YPTS_0528 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPTS_0531 IPR006059 Bacterial extracellular solute-binding protein YPTS_0533 IPR035906 MetI-like superfamily YPTS_0533 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0534 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_0534 IPR017871 ABC transporter, conserved site YPTS_0534 IPR040582 MalK, OB fold domain YPTS_0534 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0534 IPR005116 Transport-associated OB, type 1 YPTS_0534 IPR003439 ABC transporter-like YPTS_0534 IPR003593 AAA+ ATPase domain YPTS_0536 IPR012349 FMN-binding split barrel YPTS_0536 IPR011194 Uncharacterised protein family UPF0306 YPTS_0537 IPR036291 NAD(P)-binding domain superfamily YPTS_0537 IPR016040 NAD(P)-binding domain YPTS_0537 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTS_0538 IPR001279 Metallo-beta-lactamase YPTS_0538 IPR035682 Phosphonate metabolism protein, MBL domain YPTS_0538 IPR017693 Phosphonate metabolism protein PhnP YPTS_0538 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_0539 IPR008144 Guanylate kinase-like domain YPTS_0539 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPTS_0539 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPTS_0539 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0540 IPR013108 Amidohydrolase 3 YPTS_0540 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_0540 IPR032466 Metal-dependent hydrolase YPTS_0540 IPR012696 Phosphonate metabolism PhnM YPTS_0541 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0541 IPR012701 Phosphonate C-P lyase system, PhnL YPTS_0541 IPR017871 ABC transporter, conserved site YPTS_0541 IPR003439 ABC transporter-like YPTS_0541 IPR003593 AAA+ ATPase domain YPTS_0542 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0542 IPR017871 ABC transporter, conserved site YPTS_0542 IPR003439 ABC transporter-like YPTS_0542 IPR003593 AAA+ ATPase domain YPTS_0542 IPR012700 Phosphonate C-P lyase system, PhnK YPTS_0543 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase YPTS_0544 IPR008773 Phosphonate metabolism protein PhnI YPTS_0545 IPR038058 PhnH-like superfamily YPTS_0545 IPR008772 Bacterial phosphonate metabolism, PhnH YPTS_0546 IPR009609 Phosphonate metabolism PhnG YPTS_0547 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPTS_0547 IPR000524 Transcription regulator HTH, GntR YPTS_0547 IPR011663 UbiC transcription regulator-associated YPTS_0547 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0547 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0547 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTS_0549 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPTS_0549 IPR034457 Organic radical-activating enzymes YPTS_0549 IPR013785 Aldolase-type TIM barrel YPTS_0549 IPR001989 Radical-activating enzyme, conserved site YPTS_0550 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTS_0550 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPTS_0550 IPR005144 ATP-cone domain YPTS_0550 IPR001150 Glycine radical domain YPTS_0551 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0551 IPR003593 AAA+ ATPase domain YPTS_0551 IPR003439 ABC transporter-like YPTS_0551 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_0551 IPR017871 ABC transporter, conserved site YPTS_0552 IPR003439 ABC transporter-like YPTS_0552 IPR017871 ABC transporter, conserved site YPTS_0552 IPR003593 AAA+ ATPase domain YPTS_0552 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_0552 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0553 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0553 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_0553 IPR035906 MetI-like superfamily YPTS_0554 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0554 IPR035906 MetI-like superfamily YPTS_0556 IPR004375 YhcH/YjgK/YiaL family YPTS_0556 IPR037012 YhcH/YjgK/YiaL superfamily YPTS_0557 IPR024904 Ornithine carbamoyltransferase YPTS_0557 IPR002292 Ornithine/putrescine carbamoyltransferase YPTS_0557 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPTS_0557 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPTS_0557 IPR006130 Aspartate/ornithine carbamoyltransferase YPTS_0557 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPTS_0558 IPR016716 Regulator of ribonuclease activity B YPTS_0558 IPR036701 RraB-like superfamily YPTS_0558 IPR009671 Regulator of ribonuclease activity B domain YPTS_0559 IPR016181 Acyl-CoA N-acyltransferase YPTS_0559 IPR000182 GNAT domain YPTS_0560 IPR002303 Valine-tRNA ligase YPTS_0560 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTS_0560 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPTS_0560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_0560 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTS_0560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0560 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTS_0560 IPR033705 Valyl tRNA synthetase, anticodon-binding domain YPTS_0560 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTS_0560 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPTS_0560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_0561 IPR007459 DNA polymerase III chi subunit, HolC YPTS_0561 IPR036768 DNA polymerase III subunit chi superfamily YPTS_0562 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPTS_0562 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPTS_0562 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPTS_0562 IPR023042 Peptidase M17, leucine aminopeptidase YPTS_0563 IPR030922 LPS export ABC transporter permease LptF YPTS_0563 IPR005495 Permease LptG/LptF-related YPTS_0564 IPR005495 Permease LptG/LptF-related YPTS_0564 IPR030923 LPS export ABC transporter permease LptG YPTS_0568 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0568 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal YPTS_0568 IPR004473 Restriction endonuclease, type I, HsdR YPTS_0568 IPR040980 SWI2/SNF2 ATPase YPTS_0568 IPR022625 Type-1 restriction enzyme R protein, C-terminal YPTS_0568 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0569 IPR040442 Pyruvate kinase-like domain superfamily YPTS_0569 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_0569 IPR036618 PtsI, HPr-binding domain superfamily YPTS_0569 IPR008279 PEP-utilising enzyme, mobile domain YPTS_0569 IPR018274 PEP-utilising enzyme, active site YPTS_0569 IPR000032 Phosphocarrier protein HPr-like YPTS_0569 IPR035895 HPr-like superfamily YPTS_0569 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTS_0569 IPR002178 PTS EIIA type-2 domain YPTS_0569 IPR006318 Phosphotransferase system, enzyme I-like YPTS_0569 IPR016152 Phosphotransferase/anion transporter YPTS_0569 IPR036637 Phosphohistidine domain superfamily YPTS_0569 IPR023151 PEP-utilising enzyme, conserved site YPTS_0569 IPR000121 PEP-utilising enzyme, C-terminal YPTS_0569 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTS_0570 IPR019637 Protein of unknown function DUF2501 YPTS_0571 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTS_0571 IPR011008 Dimeric alpha-beta barrel YPTS_0571 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase YPTS_0572 IPR002915 DeoC/FbaB/ lacD aldolase YPTS_0572 IPR013785 Aldolase-type TIM barrel YPTS_0572 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase YPTS_0572 IPR041720 Aldolase FbaB-like, archaeal-type YPTS_0573 IPR025997 Periplasmic binding protein YPTS_0573 IPR028082 Periplasmic binding protein-like I YPTS_0573 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPTS_0574 IPR001851 ABC transporter, permease YPTS_0575 IPR001851 ABC transporter, permease YPTS_0576 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0576 IPR030281 Autoinducer 2 import ATP-binding protein LsrA YPTS_0576 IPR003593 AAA+ ATPase domain YPTS_0576 IPR003439 ABC transporter-like YPTS_0576 IPR017871 ABC transporter, conserved site YPTS_0577 IPR012318 Crp-type HTH domain YPTS_0577 IPR037171 NagB/RpiA transferase-like YPTS_0577 IPR007324 Sugar-binding domain, putative YPTS_0577 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0578 IPR000577 Carbohydrate kinase, FGGY YPTS_0578 IPR033676 Autoinducer-2 kinase YPTS_0578 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_0578 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_0579 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPTS_0579 IPR002201 Glycosyl transferase, family 9 YPTS_0581 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0581 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0581 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0581 IPR010970 Cysteine desulfurase, SufS YPTS_0581 IPR000192 Aminotransferase class V domain YPTS_0582 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPTS_0582 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTS_0582 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPTS_0582 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPTS_0582 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTS_0582 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTS_0585 IPR000594 THIF-type NAD/FAD binding fold YPTS_0585 IPR035985 Ubiquitin-activating enzyme YPTS_0585 IPR001763 Rhodanese-like domain YPTS_0585 IPR036873 Rhodanese-like domain superfamily YPTS_0587 IPR006143 RND efflux pump, membrane fusion protein YPTS_0587 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_0588 IPR001036 Acriflavin resistance protein YPTS_0588 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_0591 IPR000070 Pectinesterase, catalytic YPTS_0591 IPR011050 Pectin lyase fold/virulence factor YPTS_0591 IPR012334 Pectin lyase fold YPTS_0591 IPR033131 Pectinesterase, Asp active site YPTS_0592 IPR000160 GGDEF domain YPTS_0592 IPR012292 Globin/Protoglobin YPTS_0592 IPR029787 Nucleotide cyclase YPTS_0592 IPR009050 Globin-like superfamily YPTS_0592 IPR039435 Diguanylate cyclase DosC, globin sensor domain YPTS_0593 IPR009885 Protein of unknown function DUF1435 YPTS_0594 IPR007848 Methyltransferase small domain YPTS_0594 IPR013675 Methyltransferase small, N-terminal YPTS_0594 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_0594 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0594 IPR023543 rRNA small subunit methyltransferase C YPTS_0595 IPR036654 DNA polymerase III, psi subunit superfamily YPTS_0595 IPR018382 DNA polymerase III, psi subunit, subgroup YPTS_0595 IPR004615 DNA polymerase III, psi subunit YPTS_0596 IPR000182 GNAT domain YPTS_0596 IPR016181 Acyl-CoA N-acyltransferase YPTS_0596 IPR006464 N-acetyltransferase RimI/Ard1 YPTS_0597 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0597 IPR035647 EF-G domain III/V-like YPTS_0597 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0597 IPR004548 Peptide chain release factor 3 YPTS_0597 IPR032090 Peptide chain release factor 3, C-terminal YPTS_0597 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_0597 IPR041732 Peptide chain release factor 3, GTP-binding domain YPTS_0597 IPR005225 Small GTP-binding protein domain YPTS_0597 IPR000795 Transcription factor, GTP-binding domain YPTS_0597 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily YPTS_0597 IPR031157 Tr-type G domain, conserved site YPTS_0598 IPR014004 Transport-associated and nodulation domain, bacteria YPTS_0598 IPR007055 BON domain YPTS_0599 IPR009760 Protein of unknown function DUF1328 YPTS_0600 IPR002641 Patatin-like phospholipase domain YPTS_0600 IPR037483 YjjU-like YPTS_0600 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTS_0601 IPR001130 TatD family YPTS_0601 IPR032466 Metal-dependent hydrolase YPTS_0601 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTS_0602 IPR011657 Concentrative nucleoside transporter C-terminal domain YPTS_0602 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTS_0602 IPR002668 Concentrative nucleoside transporter N-terminal domain YPTS_0602 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPTS_0602 IPR008276 Concentrative nucleoside transporter YPTS_0603 IPR023649 Deoxyribose-phosphate aldolase type II YPTS_0603 IPR013785 Aldolase-type TIM barrel YPTS_0603 IPR002915 DeoC/FbaB/ lacD aldolase YPTS_0603 IPR011343 Deoxyribose-phosphate aldolase YPTS_0604 IPR000312 Glycosyl transferase, family 3 YPTS_0604 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTS_0604 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTS_0604 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTS_0604 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic YPTS_0604 IPR013465 Thymidine phosphorylase YPTS_0604 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPTS_0604 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily YPTS_0604 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPTS_0604 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase YPTS_0605 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_0605 IPR024052 Phosphopentomutase DeoB cap domain superfamily YPTS_0605 IPR010045 Phosphopentomutase YPTS_0605 IPR006124 Metalloenzyme YPTS_0606 IPR004402 Purine nucleoside phosphorylase DeoD-type YPTS_0606 IPR035994 Nucleoside phosphorylase superfamily YPTS_0606 IPR000845 Nucleoside phosphorylase domain YPTS_0606 IPR018016 Nucleoside phosphorylase, conserved site YPTS_0607 IPR019305 Uncharacterised protein family Smp YPTS_0608 IPR041449 Phosphoserine phosphatase, N-terminal YPTS_0608 IPR036412 HAD-like superfamily YPTS_0608 IPR023214 HAD superfamily YPTS_0608 IPR023190 Phosphoserine phosphatase, domain 2 YPTS_0609 IPR041166 LapB, rubredoxin metal binding domain YPTS_0609 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0609 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0609 IPR004504 DNA repair protein RadA YPTS_0609 IPR003593 AAA+ ATPase domain YPTS_0609 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_0609 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPTS_0610 IPR001387 Cro/C1-type helix-turn-helix domain YPTS_0610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_0610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0610 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0610 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain YPTS_0610 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPTS_0610 IPR038727 NadR/Ttd14, AAA domain YPTS_0610 IPR016429 NAD biosynthesis/regulator protein NadR YPTS_0610 IPR004821 Cytidyltransferase-like domain YPTS_0612 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0612 IPR003439 ABC transporter-like YPTS_0612 IPR017871 ABC transporter, conserved site YPTS_0612 IPR022374 Energy-dependent translational throttle protein EttA YPTS_0612 IPR003593 AAA+ ATPase domain YPTS_0612 IPR032781 ABC-transporter extension domain YPTS_0613 IPR036737 OmpA-like domain superfamily YPTS_0613 IPR006664 Outer membrane protein, bacterial YPTS_0613 IPR006665 OmpA-like domain YPTS_0614 IPR003660 HAMP domain YPTS_0614 IPR000160 GGDEF domain YPTS_0614 IPR029787 Nucleotide cyclase YPTS_0614 IPR033417 Periplasmic sensor domain CHASE8 YPTS_0616 IPR001757 P-type ATPase YPTS_0616 IPR023214 HAD superfamily YPTS_0616 IPR036412 HAD-like superfamily YPTS_0616 IPR008250 P-type ATPase, A domain superfamily YPTS_0616 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTS_0616 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_0616 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTS_0616 IPR018303 P-type ATPase, phosphorylation site YPTS_0616 IPR023299 P-type ATPase, cytoplasmic domain N YPTS_0617 IPR023346 Lysozyme-like domain superfamily YPTS_0617 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily YPTS_0617 IPR008258 Transglycosylase SLT domain 1 YPTS_0617 IPR000189 Prokaryotic transglycosylase, active site YPTS_0617 IPR012289 Lytic transglycosylase, superhelical linker YPTS_0617 IPR008939 Lytic transglycosylase, superhelical U-shaped YPTS_0618 IPR000831 Trp repressor YPTS_0618 IPR038116 TrpR-like superfamily YPTS_0618 IPR010921 Trp repressor/replication initiator YPTS_0618 IPR013335 Trp repressor, bacterial YPTS_0619 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPTS_0619 IPR002786 Inosine/xanthosine triphosphatase YPTS_0619 IPR029001 Inosine triphosphate pyrophosphatase-like YPTS_0620 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPTS_0620 IPR023086 Phosphoglycerate mutase, GpmB, probable YPTS_0620 IPR029033 Histidine phosphatase superfamily YPTS_0620 IPR013078 Histidine phosphatase superfamily, clade-1 YPTS_0621 IPR018062 HTH domain AraC-type, conserved site YPTS_0621 IPR029442 GyrI-like small molecule binding domain YPTS_0621 IPR009057 Homeobox-like domain superfamily YPTS_0621 IPR018060 DNA binding HTH domain, AraC-type YPTS_0621 IPR020449 Transcription regulator HTH, AraC- type YPTS_0621 IPR010499 Bacterial transcription activator, effector binding YPTS_0621 IPR011256 Regulatory factor, effector binding domain superfamily YPTS_0623 IPR010292 Uncharacterised protein family CreA YPTS_0624 IPR039420 Transcriptional regulatory protein WalR-like YPTS_0624 IPR011006 CheY-like superfamily YPTS_0624 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0624 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_0624 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_0624 IPR001789 Signal transduction response regulator, receiver domain YPTS_0626 IPR036291 NAD(P)-binding domain superfamily YPTS_0626 IPR019811 Homoserine dehydrogenase, conserved site YPTS_0626 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPTS_0626 IPR036393 Acetylglutamate kinase-like superfamily YPTS_0626 IPR002912 ACT domain YPTS_0626 IPR027795 CASTOR, ACT domain YPTS_0626 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPTS_0626 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_0626 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPTS_0626 IPR001341 Aspartate kinase YPTS_0626 IPR018042 Aspartate kinase, conserved site YPTS_0626 IPR001342 Homoserine dehydrogenase, catalytic YPTS_0627 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_0627 IPR000870 Homoserine kinase YPTS_0627 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0627 IPR036554 GHMP kinase, C-terminal domain superfamily YPTS_0627 IPR013750 GHMP kinase, C-terminal domain YPTS_0627 IPR006203 GHMP kinase, ATP-binding, conserved site YPTS_0627 IPR006204 GHMP kinase N-terminal domain YPTS_0628 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_0628 IPR029144 Threonine synthase, N-terminal YPTS_0628 IPR037158 Threonine synthase, N-terminal domain superfamily YPTS_0628 IPR004450 Threonine synthase-like YPTS_0628 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_0628 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTS_0629 IPR005583 Peroxide stress protein YaaA YPTS_0630 IPR004730 Transaldolase type 1 YPTS_0630 IPR013785 Aldolase-type TIM barrel YPTS_0630 IPR018225 Transaldolase, active site YPTS_0630 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPTS_0631 IPR036425 MoaB/Mog-like domain superfamily YPTS_0631 IPR001453 MoaB/Mog domain YPTS_0631 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPTS_0632 IPR005829 Sugar transporter, conserved site YPTS_0632 IPR036259 MFS transporter superfamily YPTS_0632 IPR011701 Major facilitator superfamily YPTS_0632 IPR020846 Major facilitator superfamily domain YPTS_0634 IPR000791 Acetate transporter GPR1/FUN34/SatP family YPTS_0635 IPR013126 Heat shock protein 70 family YPTS_0635 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPTS_0635 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPTS_0635 IPR012725 Chaperone DnaK YPTS_0635 IPR018181 Heat shock protein 70, conserved site YPTS_0636 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YPTS_0636 IPR036869 Chaperone J-domain superfamily YPTS_0636 IPR008971 HSP40/DnaJ peptide-binding YPTS_0636 IPR018253 DnaJ domain, conserved site YPTS_0636 IPR001623 DnaJ domain YPTS_0636 IPR002939 Chaperone DnaJ, C-terminal YPTS_0636 IPR012724 Chaperone DnaJ YPTS_0636 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPTS_0637 IPR004670 Na+/H+ antiporter NhaA YPTS_0637 IPR023171 Na/H antiporter domain superfamily YPTS_0638 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0638 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0638 IPR000847 Transcription regulator HTH, LysR YPTS_0638 IPR005119 LysR, substrate-binding YPTS_0639 IPR036510 Ribosomal protein S20 superfamily YPTS_0639 IPR002583 Ribosomal protein S20 YPTS_0640 IPR002606 Riboflavin kinase, bacterial YPTS_0640 IPR023468 Riboflavin kinase YPTS_0640 IPR015864 FAD synthetase YPTS_0640 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPTS_0640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0640 IPR023465 Riboflavin kinase domain superfamily YPTS_0641 IPR010663 Zinc finger, FPG/IleRS-type YPTS_0641 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTS_0641 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_0641 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTS_0641 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain YPTS_0641 IPR023585 Isoleucine-tRNA ligase, type 1 YPTS_0641 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTS_0641 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_0641 IPR002301 Isoleucine-tRNA ligase YPTS_0641 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0642 IPR001872 Peptidase A8, signal peptidase II YPTS_0643 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTS_0644 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPTS_0646 IPR036291 NAD(P)-binding domain superfamily YPTS_0646 IPR022664 Dihydrodipicolinate reductase, conserved site YPTS_0646 IPR000846 Dihydrodipicolinate reductase, N-terminal YPTS_0646 IPR022663 Dihydrodipicolinate reductase, C-terminal YPTS_0646 IPR023940 Dihydrodipicolinate reductase YPTS_0647 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain YPTS_0647 IPR006274 Carbamoyl-phosphate synthase, small subunit YPTS_0647 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily YPTS_0647 IPR029062 Class I glutamine amidotransferase-like YPTS_0647 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain YPTS_0647 IPR017926 Glutamine amidotransferase YPTS_0648 IPR011761 ATP-grasp fold YPTS_0648 IPR016185 Pre-ATP-grasp domain superfamily YPTS_0648 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain YPTS_0648 IPR011607 Methylglyoxal synthase-like domain YPTS_0648 IPR036914 Methylglyoxal synthase-like domain superfamily YPTS_0648 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPTS_0648 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPTS_0648 IPR006275 Carbamoyl-phosphate synthase, large subunit YPTS_0648 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily YPTS_0648 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPTS_0649 IPR001123 Amino acid exporter protein, LeuE-type YPTS_0650 IPR010619 Putative threonine/serine exporter YPTS_0651 IPR024528 Threonine/Serine exporter, ThrE YPTS_0651 IPR020914 Uncharacterised protein family UPF0442 YPTS_0652 IPR001796 Dihydrofolate reductase domain YPTS_0652 IPR012259 Dihydrofolate reductase YPTS_0652 IPR017925 Dihydrofolate reductase conserved site YPTS_0652 IPR024072 Dihydrofolate reductase-like domain superfamily YPTS_0654 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPTS_0654 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTS_0654 IPR029052 Metallo-dependent phosphatase-like YPTS_0655 IPR007474 ApaG domain YPTS_0655 IPR036767 ApaG domain superfamily YPTS_0655 IPR023065 Uncharacterised protein family ApaG YPTS_0656 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0656 IPR011530 Ribosomal RNA adenine dimethylase YPTS_0656 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPTS_0656 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPTS_0656 IPR023165 rRNA adenine dimethylase-like YPTS_0656 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPTS_0657 IPR005255 PdxA family YPTS_0657 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase YPTS_0658 IPR023034 Peptidyl-prolyl isomerase SurA YPTS_0658 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTS_0658 IPR015391 SurA N-terminal YPTS_0658 IPR027304 Trigger factor/SurA domain superfamily YPTS_0659 IPR007543 LptD, C-terminal YPTS_0659 IPR020889 LPS-assembly protein LptD YPTS_0659 IPR005653 Organic solvent tolerance-like, N-terminal YPTS_0660 IPR023749 Co-chaperone DjlA YPTS_0660 IPR007791 Co-chaperone DjlA, N-terminal YPTS_0660 IPR001623 DnaJ domain YPTS_0660 IPR036869 Chaperone J-domain superfamily YPTS_0660 IPR029024 TerB-like YPTS_0661 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTS_0661 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_0661 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_0670 IPR001270 ClpA/B family YPTS_0670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0670 IPR041546 ClpA/ClpB, AAA lid domain YPTS_0670 IPR018368 ClpA/B, conserved site 1 YPTS_0670 IPR004176 Clp, N-terminal YPTS_0670 IPR003959 ATPase, AAA-type, core YPTS_0670 IPR019489 Clp ATPase, C-terminal YPTS_0670 IPR017729 Type VI secretion system, ATPase ClpV1 YPTS_0670 IPR003593 AAA+ ATPase domain YPTS_0670 IPR036628 Clp, N-terminal domain superfamily YPTS_0671 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTS_0671 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTS_0671 IPR006531 Gp5 N-terminal YPTS_0671 IPR037026 Vgr protein, OB-fold domain superfamily YPTS_0678 IPR036737 OmpA-like domain superfamily YPTS_0678 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_0678 IPR006665 OmpA-like domain YPTS_0678 IPR006664 Outer membrane protein, bacterial YPTS_0678 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_0678 IPR008722 Outer membrane porin F, N-terminal YPTS_0682 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0682 IPR001650 Helicase, C-terminal YPTS_0682 IPR023949 RNA polymerase-associated protein RapA YPTS_0682 IPR040766 RapA, N-terminal Tudor-like domain 2 YPTS_0682 IPR040765 RapA, N-terminal Tudor like domain 1 YPTS_0682 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0682 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPTS_0682 IPR038718 SNF2-like, N-terminal domain superfamily YPTS_0682 IPR000330 SNF2-related, N-terminal domain YPTS_0683 IPR012337 Ribonuclease H-like superfamily YPTS_0683 IPR023211 DNA polymerase, palm domain superfamily YPTS_0683 IPR042087 DNA polymerase family B, C-terminal domain YPTS_0683 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPTS_0683 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPTS_0683 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPTS_0683 IPR036397 Ribonuclease H superfamily YPTS_0683 IPR006172 DNA-directed DNA polymerase, family B YPTS_0684 IPR032816 SNARE associated Golgi protein YPTS_0684 IPR032818 DedA family YPTS_0685 IPR003439 ABC transporter-like YPTS_0685 IPR003593 AAA+ ATPase domain YPTS_0685 IPR017871 ABC transporter, conserved site YPTS_0685 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPTS_0685 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0686 IPR005947 Thiamine ABC transporter, permease protein YPTS_0686 IPR035906 MetI-like superfamily YPTS_0686 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0687 IPR006061 Solute-binding family 1, conserved site YPTS_0687 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria YPTS_0687 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter YPTS_0690 IPR010106 Recombination-promoting nuclease RpnA YPTS_0690 IPR006842 Transposase (putative), YhgA-like YPTS_0691 IPR001584 Integrase, catalytic core YPTS_0691 IPR025948 HTH-like domain YPTS_0691 IPR012337 Ribonuclease H-like superfamily YPTS_0691 IPR036397 Ribonuclease H superfamily YPTS_0692 IPR023767 Transcriptional regulator SgrR YPTS_0692 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTS_0692 IPR000914 Solute-binding protein family 5 domain YPTS_0692 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0692 IPR039424 Solute-binding protein family 5 YPTS_0693 IPR036259 MFS transporter superfamily YPTS_0693 IPR004750 Sugar efflux YPTS_0693 IPR020846 Major facilitator superfamily domain YPTS_0693 IPR011701 Major facilitator superfamily YPTS_0695 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTS_0695 IPR033940 3-isopropylmalate dehydratase, swivel domain YPTS_0695 IPR004431 3-isopropylmalate dehydratase, small subunit YPTS_0695 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPTS_0696 IPR036008 Aconitase, iron-sulfur domain YPTS_0696 IPR033941 3-Isopropylmalate dehydratase, catalytic domain YPTS_0696 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTS_0696 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTS_0696 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTS_0696 IPR004430 3-isopropylmalate dehydratase, large subunit YPTS_0697 IPR024084 Isopropylmalate dehydrogenase-like domain YPTS_0697 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTS_0697 IPR004429 Isopropylmalate dehydrogenase YPTS_0698 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPTS_0698 IPR005671 2-isopropylmalate synthase, bacterial-type YPTS_0698 IPR000891 Pyruvate carboxyltransferase YPTS_0698 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily YPTS_0698 IPR013785 Aldolase-type TIM barrel YPTS_0698 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPTS_0700 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0700 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0700 IPR005119 LysR, substrate-binding YPTS_0700 IPR000847 Transcription regulator HTH, LysR YPTS_0701 IPR020845 AMP-binding, conserved site YPTS_0701 IPR000873 AMP-dependent synthetase/ligase YPTS_0701 IPR042099 AMP-dependent synthetase-like superfamily YPTS_0702 IPR029061 Thiamin diphosphate-binding fold YPTS_0702 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_0702 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTS_0702 IPR000399 TPP-binding enzyme, conserved site YPTS_0702 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_0702 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTS_0702 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTS_0702 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_0703 IPR004789 Acetolactate synthase, small subunit YPTS_0703 IPR019455 Acetolactate synthase, small subunit, C-terminal YPTS_0703 IPR002912 ACT domain YPTS_0703 IPR039557 AHAS, ACT domain YPTS_0703 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YPTS_0704 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_0704 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_0704 IPR028082 Periplasmic binding protein-like I YPTS_0704 IPR000843 LacI-type HTH domain YPTS_0704 IPR012781 D-fructose-responsive transcription factor YPTS_0705 IPR010574 L-alanine exporter AlaE YPTS_0706 IPR035644 MraZ, C-terminal YPTS_0706 IPR003444 Transcriptional regulator MraZ YPTS_0706 IPR037914 SpoVT-AbrB domain superfamily YPTS_0706 IPR007159 SpoVT-AbrB domain YPTS_0706 IPR020603 MraZ domain YPTS_0706 IPR035642 MraZ, N-terminal YPTS_0706 IPR038619 MraZ superfamily YPTS_0707 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily YPTS_0707 IPR002903 Ribosomal RNA small subunit methyltransferase H YPTS_0707 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0708 IPR011922 Cell division protein FtsL YPTS_0709 IPR001460 Penicillin-binding protein, transpeptidase YPTS_0709 IPR012338 Beta-lactamase/transpeptidase-like YPTS_0709 IPR037532 Peptidoglycan D,D-transpeptidase FtsI YPTS_0709 IPR005311 Penicillin-binding protein, dimerisation domain YPTS_0709 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPTS_0710 IPR035911 MurE/MurF, N-terminal YPTS_0710 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPTS_0710 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_0710 IPR004101 Mur ligase, C-terminal YPTS_0710 IPR036565 Mur-like, catalytic domain superfamily YPTS_0710 IPR013221 Mur ligase, central YPTS_0710 IPR000713 Mur ligase, N-terminal catalytic domain YPTS_0711 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YPTS_0711 IPR013221 Mur ligase, central YPTS_0711 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_0711 IPR004101 Mur ligase, C-terminal YPTS_0711 IPR036565 Mur-like, catalytic domain superfamily YPTS_0711 IPR035911 MurE/MurF, N-terminal YPTS_0711 IPR000713 Mur ligase, N-terminal catalytic domain YPTS_0712 IPR000715 Glycosyl transferase, family 4 YPTS_0712 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPTS_0712 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPTS_0713 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_0713 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPTS_0713 IPR013221 Mur ligase, central YPTS_0713 IPR036565 Mur-like, catalytic domain superfamily YPTS_0713 IPR004101 Mur ligase, C-terminal YPTS_0714 IPR013437 Probable peptidoglycan glycosyltransferase FtsW YPTS_0714 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPTS_0714 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPTS_0715 IPR007235 Glycosyl transferase, family 28, C-terminal YPTS_0715 IPR006009 N-acetylglucosaminyltransferase, MurG YPTS_0715 IPR004276 Glycosyltransferase family 28, N-terminal domain YPTS_0716 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_0716 IPR013221 Mur ligase, central YPTS_0716 IPR000713 Mur ligase, N-terminal catalytic domain YPTS_0716 IPR005758 UDP-N-acetylmuramate--L-alanine ligase YPTS_0716 IPR036565 Mur-like, catalytic domain superfamily YPTS_0716 IPR004101 Mur ligase, C-terminal YPTS_0717 IPR011761 ATP-grasp fold YPTS_0717 IPR013815 ATP-grasp fold, subdomain 1 YPTS_0717 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPTS_0717 IPR016185 Pre-ATP-grasp domain superfamily YPTS_0717 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPTS_0717 IPR011095 D-alanine--D-alanine ligase, C-terminal YPTS_0717 IPR005905 D-alanine--D-alanine ligase YPTS_0718 IPR013685 POTRA domain, FtsQ-type YPTS_0718 IPR005548 Cell division protein FtsQ/DivIB YPTS_0718 IPR026579 Cell division protein FtsQ YPTS_0718 IPR034746 POTRA domain YPTS_0719 IPR020823 Cell division protein FtsA YPTS_0719 IPR003494 SHS2 domain inserted in FtsA YPTS_0720 IPR020805 Cell division protein FtsZ, conserved site YPTS_0720 IPR024757 Cell division protein FtsZ, C-terminal YPTS_0720 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPTS_0720 IPR000158 Cell division protein FtsZ YPTS_0720 IPR036525 Tubulin/FtsZ, GTPase domain superfamily YPTS_0720 IPR008280 Tubulin/FtsZ, C-terminal YPTS_0720 IPR003008 Tubulin/FtsZ, GTPase domain YPTS_0721 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPTS_0721 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_0721 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPTS_0721 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPTS_0723 IPR009502 Secretion monitor YPTS_0724 IPR020937 SecA conserved site YPTS_0724 IPR014018 SecA motor DEAD YPTS_0724 IPR011115 SecA DEAD-like, N-terminal YPTS_0724 IPR011116 SecA Wing/Scaffold YPTS_0724 IPR036266 SecA, Wing/Scaffold superfamily YPTS_0724 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0724 IPR036670 SecA, preprotein cross-linking domain superfamily YPTS_0724 IPR004027 SEC-C motif YPTS_0724 IPR011130 SecA, preprotein cross-linking domain YPTS_0724 IPR000185 Protein translocase subunit SecA YPTS_0725 IPR003561 Mutator MutT YPTS_0725 IPR020084 NUDIX hydrolase, conserved site YPTS_0725 IPR000086 NUDIX hydrolase domain YPTS_0725 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_0725 IPR020476 NUDIX hydrolase YPTS_0727 IPR036515 Transposase IS200-like superfamily YPTS_0727 IPR002686 Transposase IS200-like YPTS_0728 IPR005584 DNA gyrase inhibitor YacG YPTS_0728 IPR013088 Zinc finger, NHR/GATA-type YPTS_0729 IPR009777 Cell division protein ZapD YPTS_0729 IPR036268 ZapD domain superfamily YPTS_0729 IPR027462 Z ring-associated protein D, C-terminal YPTS_0730 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0730 IPR001977 Dephospho-CoA kinase YPTS_0732 IPR001093 IMP dehydrogenase/GMP reductase YPTS_0732 IPR005993 GMP reductase YPTS_0732 IPR013785 Aldolase-type TIM barrel YPTS_0732 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPTS_0733 IPR001207 Transposase, mutator type YPTS_0734 IPR042094 Type II secretion system F domain superfamily YPTS_0734 IPR018076 Type II secretion system F domain YPTS_0734 IPR003004 GspF/PilC family YPTS_0734 IPR001992 Type II secretion system conserved site YPTS_0735 IPR001482 Type II/IV secretion system protein YPTS_0735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0735 IPR007831 General secretory system II, protein E, N-terminal YPTS_0736 IPR012902 Prokaryotic N-terminal methylation site YPTS_0737 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPTS_0737 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPTS_0737 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPTS_0737 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily YPTS_0737 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPTS_0737 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPTS_0737 IPR013785 Aldolase-type TIM barrel YPTS_0738 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTS_0738 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTS_0739 IPR031347 Protein AmpE YPTS_0740 IPR004841 Amino acid permease/ SLC12A domain YPTS_0740 IPR004840 Amino acid permease, conserved site YPTS_0742 IPR011711 GntR, C-terminal YPTS_0742 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTS_0742 IPR000524 Transcription regulator HTH, GntR YPTS_0742 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0742 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0743 IPR005474 Transketolase, N-terminal YPTS_0743 IPR029061 Thiamin diphosphate-binding fold YPTS_0743 IPR041621 Pyruvate dehydrogenase E1 component, middle domain YPTS_0743 IPR004660 Pyruvate dehydrogenase E1 component YPTS_0743 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTS_0743 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal YPTS_0744 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTS_0744 IPR036625 E3-binding domain superfamily YPTS_0744 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPTS_0744 IPR000089 Biotin/lipoyl attachment YPTS_0744 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_0744 IPR011053 Single hybrid motif YPTS_0744 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPTS_0744 IPR004167 Peripheral subunit-binding domain YPTS_0745 IPR006258 Dihydrolipoamide dehydrogenase YPTS_0745 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTS_0745 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_0745 IPR023753 FAD/NAD(P)-binding domain YPTS_0745 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTS_0745 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTS_0745 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTS_0746 IPR015929 Aconitase B, swivel YPTS_0746 IPR004406 Aconitase B YPTS_0746 IPR015933 Aconitase B, HEAT-like domain YPTS_0746 IPR015932 Aconitase, domain 2 YPTS_0746 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTS_0746 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTS_0746 IPR036008 Aconitase, iron-sulfur domain YPTS_0746 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTS_0746 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTS_0746 IPR036288 Aconitase B, HEAT-like domain superfamily YPTS_0747 IPR008249 Uncharacterised protein family UPF0231 YPTS_0748 IPR000620 EamA domain YPTS_0750 IPR016067 S-adenosylmethionine decarboxylase, core YPTS_0750 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPTS_0750 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPTS_0751 IPR035246 Spermidine synthase, tetramerisation domain YPTS_0751 IPR030373 Polyamine biosynthesis domain, conserved site YPTS_0751 IPR001045 Spermidine/spermine synthases YPTS_0751 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0751 IPR030374 Polyamine biosynthesis domain YPTS_0751 IPR037163 Spermidine synthase, tetramerisation domain superfamily YPTS_0752 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPTS_0752 IPR038432 PulS/OutS-like superfamily YPTS_0753 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_0753 IPR008972 Cupredoxin YPTS_0753 IPR002355 Multicopper oxidase, copper-binding site YPTS_0753 IPR011707 Multicopper oxidase, type 3 YPTS_0753 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTS_0753 IPR001117 Multicopper oxidase, type 1 YPTS_0753 IPR011706 Multicopper oxidase, type 2 YPTS_0754 IPR000836 Phosphoribosyltransferase domain YPTS_0754 IPR005904 Hypoxanthine phosphoribosyl transferase YPTS_0754 IPR029057 Phosphoribosyltransferase-like YPTS_0755 IPR036874 Carbonic anhydrase superfamily YPTS_0755 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPTS_0755 IPR001765 Carbonic anhydrase YPTS_0756 IPR003439 ABC transporter-like YPTS_0756 IPR003593 AAA+ ATPase domain YPTS_0756 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0756 IPR017871 ABC transporter, conserved site YPTS_0757 IPR013525 ABC-2 type transporter YPTS_0757 IPR000412 ABC-2 transporter YPTS_0758 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_0758 IPR002509 NodB homology domain YPTS_0759 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_0759 IPR003190 Aspartate decarboxylase YPTS_0760 IPR003721 Pantoate-beta-alanine ligase YPTS_0760 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain YPTS_0760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0761 IPR003700 Ketopantoate hydroxymethyltransferase YPTS_0761 IPR040442 Pyruvate kinase-like domain superfamily YPTS_0761 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_0762 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily YPTS_0762 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPTS_0763 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTS_0763 IPR025866 Polymerase A arginine-rich C-terminal domain YPTS_0763 IPR010206 Poly(A) polymerase I YPTS_0763 IPR002646 Poly A polymerase, head domain YPTS_0764 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTS_0764 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPTS_0764 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTS_0764 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0765 IPR037187 DksA, N-terminal domain superfamily YPTS_0765 IPR012784 RNA polymerase-binding transcription factor DksA YPTS_0765 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPTS_0765 IPR000962 Zinc finger, DksA/TraR C4-type YPTS_0765 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPTS_0766 IPR005224 Sugar fermentation stimulation protein YPTS_0766 IPR040452 Sugar fermentation stimulation protein, C-terminal YPTS_0766 IPR041465 SfsA, N-terminal OB domain YPTS_0767 IPR014051 Phosphoesterase, HXTX YPTS_0767 IPR004175 RNA 2',3'-cyclic phosphodiesterase YPTS_0767 IPR009097 Cyclic phosphodiesterase YPTS_0769 IPR011545 DEAD/DEAH box helicase domain YPTS_0769 IPR007502 Helicase-associated domain YPTS_0769 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPTS_0769 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_0769 IPR001650 Helicase, C-terminal YPTS_0769 IPR010225 ATP-dependent helicase HrpB YPTS_0769 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0770 IPR036950 Penicillin binding protein transglycosylase domain YPTS_0770 IPR028166 Bifunctional transglycosylase second domain YPTS_0770 IPR012338 Beta-lactamase/transpeptidase-like YPTS_0770 IPR011813 Penicillin-binding protein 1B YPTS_0770 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPTS_0770 IPR023346 Lysozyme-like domain superfamily YPTS_0770 IPR001460 Penicillin-binding protein, transpeptidase YPTS_0770 IPR001264 Glycosyl transferase, family 51 YPTS_0771 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0771 IPR003593 AAA+ ATPase domain YPTS_0771 IPR017871 ABC transporter, conserved site YPTS_0771 IPR003439 ABC transporter-like YPTS_0772 IPR002491 ABC transporter periplasmic binding domain YPTS_0773 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_0773 IPR037294 ABC transporter, BtuC-like YPTS_0774 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPTS_0774 IPR005814 Aminotransferase class-III YPTS_0774 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0774 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0774 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0776 IPR023861 Chloride channel, ClcA YPTS_0776 IPR014743 Chloride channel, core YPTS_0776 IPR001807 Chloride channel, voltage gated YPTS_0777 IPR035903 HesB-like domain superfamily YPTS_0777 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTS_0777 IPR016092 FeS cluster insertion protein YPTS_0777 IPR023063 FeS cluster insertion protein ErpA YPTS_0777 IPR000361 FeS cluster biogenesis YPTS_0778 IPR005115 Uncharacterised domain UPF0126 YPTS_0779 IPR002491 ABC transporter periplasmic binding domain YPTS_0779 IPR023544 ABC transporter, vitamin B12-binding protein YPTS_0780 IPR010049 MTA/SAH nucleosidase YPTS_0780 IPR000845 Nucleoside phosphorylase domain YPTS_0780 IPR035994 Nucleoside phosphorylase superfamily YPTS_0781 IPR026875 Phosphohydrolase-associated domain YPTS_0781 IPR003607 HD/PDEase domain YPTS_0781 IPR020779 dNTP triphosphohydrolase, type 1 YPTS_0781 IPR006261 dNTP triphosphohydrolase YPTS_0781 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily YPTS_0781 IPR006674 HD domain YPTS_0782 IPR001478 PDZ domain YPTS_0782 IPR036034 PDZ superfamily YPTS_0782 IPR011782 Peptidase S1C, Do YPTS_0782 IPR009003 Peptidase S1, PA clan YPTS_0782 IPR001940 Peptidase S1C YPTS_0783 IPR001789 Signal transduction response regulator, receiver domain YPTS_0783 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0783 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0783 IPR005467 Histidine kinase domain YPTS_0783 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0783 IPR003660 HAMP domain YPTS_0783 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0783 IPR011006 CheY-like superfamily YPTS_0783 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_0783 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0783 IPR036641 HPT domain superfamily YPTS_0783 IPR019247 Histidine kinase BarA, N-terminal YPTS_0784 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD YPTS_0784 IPR030390 RNA methyltransferase TrmA, active site YPTS_0784 IPR002792 TRAM domain YPTS_0784 IPR030391 RNA methyltransferase TrmA, conserved site YPTS_0784 IPR010280 (Uracil-5)-methyltransferase family YPTS_0784 IPR012340 Nucleic acid-binding, OB-fold YPTS_0784 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0785 IPR004811 RelA/SpoT family YPTS_0785 IPR007685 RelA/SpoT YPTS_0785 IPR003607 HD/PDEase domain YPTS_0785 IPR012675 Beta-grasp domain superfamily YPTS_0785 IPR002912 ACT domain YPTS_0785 IPR033655 RelA, TGS domain YPTS_0785 IPR012676 TGS-like YPTS_0785 IPR004095 TGS YPTS_0786 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPTS_0786 IPR011551 NTP pyrophosphohydrolase MazG YPTS_0787 IPR033828 CTP synthase GATase domain YPTS_0787 IPR004468 CTP synthase YPTS_0787 IPR017456 CTP synthase, N-terminal YPTS_0787 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0787 IPR029062 Class I glutamine amidotransferase-like YPTS_0787 IPR017926 Glutamine amidotransferase YPTS_0788 IPR020811 Enolase, N-terminal YPTS_0788 IPR000941 Enolase YPTS_0788 IPR036849 Enolase-like, C-terminal domain superfamily YPTS_0788 IPR029017 Enolase-like, N-terminal YPTS_0788 IPR020810 Enolase, C-terminal TIM barrel domain YPTS_0788 IPR020809 Enolase, conserved site YPTS_0789 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily YPTS_0789 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone YPTS_0789 IPR018152 Superoxide dismutase, copper/zinc, binding site YPTS_0789 IPR001424 Superoxide dismutase, copper/zinc binding domain YPTS_0790 IPR024924 7-carboxy-7-deazaguanine synthase-like YPTS_0790 IPR007197 Radical SAM YPTS_0790 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPTS_0790 IPR013785 Aldolase-type TIM barrel YPTS_0791 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family YPTS_0791 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily YPTS_0792 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_0792 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily YPTS_0792 IPR029039 Flavoprotein-like superfamily YPTS_0792 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTS_0792 IPR008254 Flavodoxin/nitric oxide synthase YPTS_0792 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_0792 IPR017938 Riboflavin synthase-like beta-barrel YPTS_0792 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPTS_0792 IPR001094 Flavodoxin-like YPTS_0792 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_0792 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPTS_0792 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding YPTS_0793 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPTS_0793 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPTS_0793 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPTS_0793 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPTS_0793 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPTS_0794 IPR011800 Phosphoadenosine phosphosulphate reductase CysH YPTS_0794 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0794 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase YPTS_0794 IPR002500 Phosphoadenosine phosphosulphate reductase YPTS_0798 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTS_0798 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTS_0798 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPTS_0798 IPR036291 NAD(P)-binding domain superfamily YPTS_0798 IPR035996 Tetrapyrrole methylase superfamily YPTS_0798 IPR028281 Siroheme synthase, central domain YPTS_0798 IPR000878 Tetrapyrrole methylase YPTS_0798 IPR012409 Sirohaem synthase YPTS_0798 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPTS_0798 IPR019478 Sirohaem synthase, dimerisation domain YPTS_0798 IPR006367 Sirohaem synthase, N-terminal YPTS_0798 IPR006366 Uroporphyrin-III C-methyltransferase YPTS_0799 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0799 IPR002500 Phosphoadenosine phosphosulphate reductase YPTS_0799 IPR011784 Sulphate adenylyltransferase, small subunit YPTS_0800 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTS_0800 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0800 IPR031157 Tr-type G domain, conserved site YPTS_0800 IPR011779 Sulphate adenylyltransferase, large subunit YPTS_0800 IPR005225 Small GTP-binding protein domain YPTS_0800 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0800 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain YPTS_0800 IPR000795 Transcription factor, GTP-binding domain YPTS_0801 IPR002891 Adenylyl-sulfate kinase YPTS_0801 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0802 IPR022721 Protein of unknown function DUF3561 YPTS_0803 IPR023081 Cell division protein FtsB YPTS_0803 IPR007060 Septum formation initiator FtsL/DivIC YPTS_0804 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPTS_0804 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPTS_0804 IPR034683 Cytidylyltransferase IspD/TarI YPTS_0804 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_0805 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPTS_0805 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily YPTS_0805 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPTS_0806 IPR020119 Pseudouridine synthase TruD, conserved site YPTS_0806 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_0806 IPR001656 Pseudouridine synthase, TruD YPTS_0806 IPR011760 Pseudouridine synthase, TruD, insertion domain YPTS_0806 IPR042214 Pseudouridine synthase, TruD, catalytic domain YPTS_0807 IPR030048 Survival protein SurE YPTS_0807 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPTS_0807 IPR036523 SurE-like phosphatase/nucleotidase superfamily YPTS_0808 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0808 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPTS_0809 IPR016047 Peptidase M23 YPTS_0809 IPR036779 LysM domain superfamily YPTS_0809 IPR011055 Duplicated hybrid motif YPTS_0809 IPR018392 LysM domain YPTS_0810 IPR007627 RNA polymerase sigma-70 region 2 YPTS_0810 IPR013325 RNA polymerase sigma factor, region 2 YPTS_0810 IPR007630 RNA polymerase sigma-70 region 4 YPTS_0810 IPR007624 RNA polymerase sigma-70 region 3 YPTS_0810 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_0810 IPR009042 RNA polymerase sigma-70 region 1.2 YPTS_0810 IPR012761 RNA polymerase sigma factor RpoS YPTS_0810 IPR014284 RNA polymerase sigma-70 like domain YPTS_0810 IPR000943 RNA polymerase sigma-70 YPTS_0810 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0811 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0811 IPR036678 MutS, connector domain superfamily YPTS_0811 IPR007860 DNA mismatch repair protein MutS, connector domain YPTS_0811 IPR005748 DNA mismatch repair protein MutS YPTS_0811 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPTS_0811 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YPTS_0811 IPR016151 DNA mismatch repair protein MutS, N-terminal YPTS_0811 IPR007696 DNA mismatch repair protein MutS, core YPTS_0811 IPR007861 DNA mismatch repair protein MutS, clamp YPTS_0811 IPR000432 DNA mismatch repair protein MutS, C-terminal YPTS_0811 IPR017261 DNA mismatch repair protein MutS/MSH YPTS_0813 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily YPTS_0813 IPR004785 Ribose 5-phosphate isomerase B YPTS_0813 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPTS_0814 IPR020843 Polyketide synthase, enoylreductase domain YPTS_0814 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_0814 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_0814 IPR036291 NAD(P)-binding domain superfamily YPTS_0814 IPR011032 GroES-like superfamily YPTS_0815 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_0815 IPR036291 NAD(P)-binding domain superfamily YPTS_0815 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_0816 IPR004006 DhaK domain YPTS_0817 IPR036117 DhaL domain superfamily YPTS_0817 IPR004007 DhaL domain YPTS_0817 IPR012737 Dihydroxyacetone kinase, subunit L YPTS_0818 IPR011991 ArsR-like helix-turn-helix domain YPTS_0818 IPR037171 NagB/RpiA transferase-like YPTS_0818 IPR025246 Transposase IS30-like HTH domain YPTS_0818 IPR007324 Sugar-binding domain, putative YPTS_0818 IPR009057 Homeobox-like domain superfamily YPTS_0819 IPR000802 Arsenical pump membrane protein, ArsB YPTS_0820 IPR018334 ArsR-type transcription regulator, HTH motif YPTS_0820 IPR001845 HTH ArsR-type DNA-binding domain YPTS_0820 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0820 IPR011991 ArsR-like helix-turn-helix domain YPTS_0820 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0823 IPR018313 Solute-binding protein family 3, conserved site YPTS_0823 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTS_0823 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_0824 IPR009056 Cytochrome c-like domain YPTS_0824 IPR025992 Haem-binding domain YPTS_0824 IPR036909 Cytochrome c-like domain superfamily YPTS_0824 IPR004852 Di-haem cytochrome c peroxidase YPTS_0827 IPR010916 TonB box, conserved site YPTS_0827 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_0827 IPR010917 TonB-dependent receptor, conserved site YPTS_0827 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_0827 IPR012910 TonB-dependent receptor, plug domain YPTS_0827 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_0827 IPR039426 Vitamin B12 transporter BtuB-like YPTS_0829 IPR001714 Peptidase M24, methionine aminopeptidase YPTS_0829 IPR000994 Peptidase M24 YPTS_0829 IPR036005 Creatinase/aminopeptidase-like YPTS_0829 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPTS_0831 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily YPTS_0831 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPTS_0831 IPR020557 Fumarate lyase, conserved site YPTS_0831 IPR011167 Iron-dependent fumarate hydratase YPTS_0831 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPTS_0832 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_0832 IPR000577 Carbohydrate kinase, FGGY YPTS_0832 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_0832 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTS_0833 IPR036237 Xylose isomerase-like superfamily YPTS_0833 IPR001719 AP endonuclease 2 YPTS_0833 IPR004560 L-ribulose-5-phosphate 3-epimerase YPTS_0833 IPR013022 Xylose isomerase-like, TIM barrel domain YPTS_0834 IPR001851 ABC transporter, permease YPTS_0835 IPR001851 ABC transporter, permease YPTS_0836 IPR017871 ABC transporter, conserved site YPTS_0836 IPR003593 AAA+ ATPase domain YPTS_0836 IPR003439 ABC transporter-like YPTS_0836 IPR015861 ABC transporter, ribose import, RbsA YPTS_0836 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0838 IPR014036 DeoR C-terminal sensor domain YPTS_0838 IPR001034 DeoR-type HTH domain YPTS_0838 IPR037171 NagB/RpiA transferase-like YPTS_0838 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0838 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0838 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_0839 IPR001303 Class II aldolase/adducin N-terminal YPTS_0839 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_0839 IPR004661 L-ribulose-5-phosphate 4-epimerase YPTS_0839 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPTS_0840 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_0840 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPTS_0840 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_0840 IPR006656 Molybdopterin oxidoreductase YPTS_0840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_0840 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_0840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTS_0840 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_0840 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTS_0841 IPR014297 Dimethylsulphoxide reductase, chain B YPTS_0841 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_0841 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_0842 IPR007059 DMSO reductase anchor subunit (DmsC) YPTS_0843 IPR028611 Tat proofreading chaperone DmsD YPTS_0843 IPR020945 DMSO/Nitrate reductase chaperone YPTS_0843 IPR036411 TorD-like superfamily YPTS_0843 IPR026269 Tat proofreading chaperone DmsD-type YPTS_0844 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTS_0844 IPR016174 Di-haem cytochrome, transmembrane YPTS_0845 IPR009155 Cytochrome b562 YPTS_0845 IPR010980 Cytochrome c/b562 YPTS_0846 IPR000763 Catalase-peroxidase haem YPTS_0846 IPR019793 Peroxidases heam-ligand binding site YPTS_0846 IPR019794 Peroxidase, active site YPTS_0846 IPR010255 Haem peroxidase superfamily YPTS_0846 IPR002016 Haem peroxidase YPTS_0849 IPR015861 ABC transporter, ribose import, RbsA YPTS_0849 IPR003593 AAA+ ATPase domain YPTS_0849 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0849 IPR017871 ABC transporter, conserved site YPTS_0849 IPR003439 ABC transporter-like YPTS_0850 IPR001851 ABC transporter, permease YPTS_0851 IPR029061 Thiamin diphosphate-binding fold YPTS_0851 IPR005474 Transketolase, N-terminal YPTS_0852 IPR005475 Transketolase-like, pyrimidine-binding domain YPTS_0852 IPR029061 Thiamin diphosphate-binding fold YPTS_0852 IPR033248 Transketolase, C-terminal domain YPTS_0852 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTS_0853 IPR042016 Apulose kinase YPTS_0853 IPR000577 Carbohydrate kinase, FGGY YPTS_0853 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_0853 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_0857 IPR023745 MSF-type transporter, YcaD YPTS_0857 IPR036259 MFS transporter superfamily YPTS_0857 IPR020846 Major facilitator superfamily domain YPTS_0857 IPR011701 Major facilitator superfamily YPTS_0858 IPR008136 CinA, C-terminal YPTS_0858 IPR036653 CinA-like, C-terminal YPTS_0859 IPR003593 AAA+ ATPase domain YPTS_0859 IPR023400 DNA recombination and repair protein RecA, C-terminal YPTS_0859 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPTS_0859 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface YPTS_0859 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0859 IPR020584 DNA recombination/repair protein RecA, conserved site YPTS_0859 IPR013765 DNA recombination and repair protein RecA YPTS_0860 IPR003783 Regulatory protein RecX YPTS_0860 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0861 IPR003156 DHHA1 domain YPTS_0861 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPTS_0861 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPTS_0861 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain YPTS_0861 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPTS_0861 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0861 IPR002318 Alanine-tRNA ligase, class IIc YPTS_0861 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPTS_0861 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily YPTS_0862 IPR036107 Carbon storage regulator superfamily YPTS_0862 IPR003751 Translational regulator CsrA YPTS_0863 IPR010976 Beta-phosphoglucomutase hydrolase YPTS_0863 IPR006439 HAD hydrolase, subfamily IA YPTS_0863 IPR036412 HAD-like superfamily YPTS_0863 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_0863 IPR023214 HAD superfamily YPTS_0863 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_0864 IPR032816 SNARE associated Golgi protein YPTS_0865 IPR007370 Glutamate--cysteine ligase YPTS_0865 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPTS_0865 IPR006334 Glutamate--cysteine ligase, monofunctional YPTS_0866 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTS_0866 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily YPTS_0866 IPR003815 S-ribosylhomocysteinase (LuxS) YPTS_0867 IPR005170 Transporter-associated domain YPTS_0867 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_0867 IPR002550 CNNM, transmembrane domain YPTS_0867 IPR000644 CBS domain YPTS_0867 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_0868 IPR002541 Cytochrome c assembly protein YPTS_0869 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily YPTS_0869 IPR003593 AAA+ ATPase domain YPTS_0869 IPR013822 Signal recognition particle SRP54, helical bundle YPTS_0869 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPTS_0869 IPR004780 Signal recognition particle protein YPTS_0869 IPR022941 Signal recognition particle, SRP54 subunit YPTS_0869 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0869 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPTS_0869 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPTS_0870 IPR023803 Ribosomal protein S16 domain superfamily YPTS_0870 IPR020592 Ribosomal protein S16, conserved site YPTS_0870 IPR000307 Ribosomal protein S16 YPTS_0871 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_0871 IPR036976 RimM, N-terminal domain superfamily YPTS_0871 IPR002676 RimM, N-terminal YPTS_0871 IPR011033 PRC-barrel-like superfamily YPTS_0871 IPR011961 16S rRNA processing protein RimM YPTS_0871 IPR027275 PRC-barrel domain YPTS_0872 IPR029028 Alpha/beta knot methyltransferases YPTS_0872 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPTS_0872 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPTS_0872 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPTS_0872 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_0873 IPR008991 Translation protein SH3-like domain superfamily YPTS_0873 IPR018257 Ribosomal protein L19, conserved site YPTS_0873 IPR001857 Ribosomal protein L19 YPTS_0873 IPR038657 Ribosomal protein L19 superfamily YPTS_0874 IPR007433 Protein of unknown function DUF481 YPTS_0875 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPTS_0876 IPR001789 Signal transduction response regulator, receiver domain YPTS_0876 IPR007492 LytTR DNA-binding domain YPTS_0876 IPR011006 CheY-like superfamily YPTS_0877 IPR013785 Aldolase-type TIM barrel YPTS_0877 IPR006219 DHAP synthase, class 1 YPTS_0877 IPR006218 DAHP synthetase I/KDSA YPTS_0878 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0878 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPTS_0878 IPR003099 Prephenate dehydrogenase YPTS_0878 IPR036291 NAD(P)-binding domain superfamily YPTS_0878 IPR036263 Chorismate mutase type II superfamily YPTS_0878 IPR036979 Chorismate mutase domain superfamily YPTS_0878 IPR002701 Chorismate mutase II, prokaryotic-type YPTS_0878 IPR011277 Chorismate mutase, T-protein YPTS_0879 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0879 IPR003593 AAA+ ATPase domain YPTS_0879 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_0879 IPR002611 IstB-like ATP-binding protein YPTS_0879 IPR001270 ClpA/B family YPTS_0880 IPR017894 HTH domain, IS21 transposase-type YPTS_0880 IPR006120 Resolvase, HTH domain YPTS_0880 IPR012337 Ribonuclease H-like superfamily YPTS_0880 IPR036397 Ribonuclease H superfamily YPTS_0880 IPR001584 Integrase, catalytic core YPTS_0881 IPR002912 ACT domain YPTS_0881 IPR018528 Prephenate dehydratase, conserved site YPTS_0881 IPR001086 Prephenate dehydratase YPTS_0881 IPR036263 Chorismate mutase type II superfamily YPTS_0881 IPR036979 Chorismate mutase domain superfamily YPTS_0881 IPR002701 Chorismate mutase II, prokaryotic-type YPTS_0881 IPR010952 Chorismate mutase, gammaproteobacteria YPTS_0881 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase YPTS_0883 IPR003489 Ribosome hibernation promoting factor/RaiA YPTS_0883 IPR036567 Ribosome hibernation promotion factor-like YPTS_0884 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_0884 IPR039565 Outer membrane lipoprotein BamD-like YPTS_0884 IPR017689 Outer membrane protein assembly factor BamD YPTS_0885 IPR036986 RNA-binding S4 domain superfamily YPTS_0885 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_0885 IPR006225 Pseudouridine synthase, RluC/RluD YPTS_0885 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTS_0885 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_0885 IPR002942 RNA-binding S4 domain YPTS_0887 IPR017730 Chaperonin ClpB YPTS_0887 IPR003593 AAA+ ATPase domain YPTS_0887 IPR003959 ATPase, AAA-type, core YPTS_0887 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0887 IPR041546 ClpA/ClpB, AAA lid domain YPTS_0887 IPR028299 ClpA/B, conserved site 2 YPTS_0887 IPR019489 Clp ATPase, C-terminal YPTS_0887 IPR036628 Clp, N-terminal domain superfamily YPTS_0887 IPR018368 ClpA/B, conserved site 1 YPTS_0887 IPR001270 ClpA/B family YPTS_0887 IPR004176 Clp, N-terminal YPTS_0891 IPR017028 Uncharacterised conserved protein UCP034456 YPTS_0891 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPTS_0892 IPR016270 CDP-alcohol phosphatidyltransferase class-II family YPTS_0892 IPR025202 Phospholipase D-like domain YPTS_0892 IPR001736 Phospholipase D/Transphosphatidylase YPTS_0893 IPR013815 ATP-grasp fold, subdomain 1 YPTS_0893 IPR016181 Acyl-CoA N-acyltransferase YPTS_0893 IPR011761 ATP-grasp fold YPTS_0893 IPR003781 CoA-binding YPTS_0893 IPR000182 GNAT domain YPTS_0893 IPR036291 NAD(P)-binding domain superfamily YPTS_0893 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPTS_0893 IPR016102 Succinyl-CoA synthetase-like YPTS_0895 IPR013766 Thioredoxin domain YPTS_0895 IPR005746 Thioredoxin YPTS_0895 IPR036249 Thioredoxin-like superfamily YPTS_0895 IPR017937 Thioredoxin, conserved site YPTS_0896 IPR029028 Alpha/beta knot methyltransferases YPTS_0896 IPR029064 50S ribosomal protein L30e-like YPTS_0896 IPR004441 RNA methyltransferase TrmH family YPTS_0896 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTS_0896 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPTS_0896 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_0896 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPTS_0897 IPR004638 Drug resistance transporter EmrB-like YPTS_0897 IPR036259 MFS transporter superfamily YPTS_0897 IPR020846 Major facilitator superfamily domain YPTS_0897 IPR011701 Major facilitator superfamily YPTS_0898 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_0898 IPR005694 Efflux pump membrane protein YPTS_0899 IPR000835 MarR-type HTH domain YPTS_0899 IPR023187 Transcriptional regulator MarR-type, conserved site YPTS_0899 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0899 IPR036390 Winged helix DNA-binding domain superfamily YPTS_0900 IPR008407 Branched-chain amino acid transport, AzlD YPTS_0901 IPR011606 Branched-chain amino acid transport, permease YPTS_0902 IPR011701 Major facilitator superfamily YPTS_0902 IPR020846 Major facilitator superfamily domain YPTS_0902 IPR036259 MFS transporter superfamily YPTS_0904 IPR000120 Amidase YPTS_0904 IPR036928 Amidase signature (AS) superfamily YPTS_0904 IPR014087 1-carboxybiuret hydrolase, AtzE subunit YPTS_0904 IPR023631 Amidase signature domain YPTS_0907 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_0907 IPR018313 Solute-binding protein family 3, conserved site YPTS_0907 IPR037298 Cyclohexadienyl dehydratase pheC YPTS_0908 IPR035906 MetI-like superfamily YPTS_0908 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_0908 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_0910 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTS_0910 IPR003439 ABC transporter-like YPTS_0910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0910 IPR017871 ABC transporter, conserved site YPTS_0910 IPR003593 AAA+ ATPase domain YPTS_0911 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0911 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0911 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0911 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_0911 IPR000192 Aminotransferase class V domain YPTS_0911 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase YPTS_0912 IPR011650 Peptidase M20, dimerisation domain YPTS_0912 IPR002933 Peptidase M20 YPTS_0912 IPR010158 Amidase, carbamoylase-type YPTS_0912 IPR036264 Bacterial exopeptidase dimerisation domain YPTS_0913 IPR003010 Carbon-nitrogen hydrolase YPTS_0913 IPR036526 Carbon-nitrogen hydrolase superfamily YPTS_0913 IPR001110 Uncharacterised protein family UPF0012, conserved site YPTS_0914 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_0914 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_0914 IPR004839 Aminotransferase, class I/classII YPTS_0914 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_0915 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_0915 IPR017714 Methylthioribulose-1-phosphate dehydratase YPTS_0915 IPR001303 Class II aldolase/adducin N-terminal YPTS_0916 IPR023214 HAD superfamily YPTS_0916 IPR006439 HAD hydrolase, subfamily IA YPTS_0916 IPR036412 HAD-like superfamily YPTS_0916 IPR023943 Enolase-phosphatase E1 YPTS_0917 IPR023956 Acireductone dioxygenase ARD, bacteria YPTS_0917 IPR014710 RmlC-like jelly roll fold YPTS_0917 IPR011051 RmlC-like cupin domain superfamily YPTS_0917 IPR004313 Acireductone dioxygenase ARD family YPTS_0918 IPR037171 NagB/RpiA transferase-like YPTS_0918 IPR000649 Initiation factor 2B-related YPTS_0918 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal YPTS_0918 IPR011559 Initiation factor 2B alpha/beta/delta YPTS_0918 IPR005251 Methylthioribose-1-phosphate isomerase YPTS_0919 IPR002575 Aminoglycoside phosphotransferase YPTS_0919 IPR011009 Protein kinase-like domain superfamily YPTS_0919 IPR009212 Methylthioribose kinase YPTS_0921 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_0921 IPR034746 POTRA domain YPTS_0921 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_0922 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_0922 IPR012334 Pectin lyase fold YPTS_0922 IPR011050 Pectin lyase fold/virulence factor YPTS_0923 IPR041109 HMW1C N-terminal YPTS_0923 IPR040542 HMW1 domain 2 YPTS_0925 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPTS_0925 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTS_0925 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPTS_0925 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPTS_0925 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPTS_0925 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTS_0926 IPR035461 GmhA/DiaA YPTS_0926 IPR001347 Sugar isomerase (SIS) YPTS_0926 IPR004515 Phosphoheptose isomerase YPTS_0927 IPR017932 Glutamine amidotransferase type 2 domain YPTS_0927 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_0927 IPR026869 Putative glutamine amidotransferase type 2 YPTS_0928 IPR005490 L,D-transpeptidase catalytic domain YPTS_0928 IPR038063 L,D-transpeptidase catalytic domain-like YPTS_0929 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain YPTS_0929 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A YPTS_0930 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPTS_0930 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B YPTS_0931 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C YPTS_0931 IPR007329 FMN-binding YPTS_0932 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D YPTS_0932 IPR003667 NqrDE/RnfAE YPTS_0933 IPR003667 NqrDE/RnfAE YPTS_0933 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPTS_0934 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_0934 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_0934 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_0934 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F YPTS_0934 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_0934 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_0934 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_0934 IPR012675 Beta-grasp domain superfamily YPTS_0934 IPR017938 Riboflavin synthase-like beta-barrel YPTS_0934 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTS_0935 IPR024932 Flavin transferase ApbE YPTS_0935 IPR042159 Flavin-trafficking protein ApbE YPTS_0935 IPR003374 ApbE-like superfamily YPTS_0937 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTS_0937 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTS_0938 IPR036775 DNA polymerase, Y-family, little finger domain superfamily YPTS_0938 IPR017961 DNA polymerase, Y-family, little finger domain YPTS_0938 IPR022880 DNA polymerase IV YPTS_0938 IPR001126 UmuC domain YPTS_0938 IPR024728 DNA polymerase type-Y, HhH motif YPTS_0939 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPTS_0939 IPR011650 Peptidase M20, dimerisation domain YPTS_0939 IPR002933 Peptidase M20 YPTS_0943 IPR000836 Phosphoribosyltransferase domain YPTS_0943 IPR029057 Phosphoribosyltransferase-like YPTS_0943 IPR023747 Xanthine-guanine phosphoribosyltransferase YPTS_0945 IPR038208 Sigma factor-binding protein Crl superfamily YPTS_0945 IPR009986 Sigma factor-binding transcriptional regulator Crl YPTS_0946 IPR015947 PUA-like superfamily YPTS_0946 IPR036393 Acetylglutamate kinase-like superfamily YPTS_0946 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_0946 IPR041739 Glutamate-5-kinase domain YPTS_0946 IPR001057 Glutamate/acetylglutamate kinase YPTS_0946 IPR011529 Glutamate 5-kinase YPTS_0946 IPR002478 PUA domain YPTS_0946 IPR019797 Glutamate 5-kinase, conserved site YPTS_0946 IPR036974 PUA domain superfamily YPTS_0946 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPTS_0947 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPTS_0947 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPTS_0947 IPR015590 Aldehyde dehydrogenase domain YPTS_0947 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_0947 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_0947 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_0947 IPR000965 GPR domain YPTS_0948 IPR009875 PilZ domain YPTS_0948 IPR023787 Type III secretion system flagellar brake protein YcgR YPTS_0948 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPTS_0948 IPR012349 FMN-binding split barrel YPTS_0950 IPR013216 Methyltransferase type 11 YPTS_0950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_0952 IPR027544 Shikimate kinase 2 YPTS_0952 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPTS_0952 IPR023000 Shikimate kinase, conserved site YPTS_0952 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0952 IPR031322 Shikimate kinase/gluconokinase YPTS_0953 IPR009664 Pyrimidine/purine nucleoside phosphorylase YPTS_0953 IPR014710 RmlC-like jelly roll fold YPTS_0953 IPR011051 RmlC-like cupin domain superfamily YPTS_0954 IPR007476 Putative exonuclease, RdgC YPTS_0955 IPR000600 ROK family YPTS_0956 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_0956 IPR004592 Nuclease SbcC, gammaproteobacteria type YPTS_0956 IPR038729 Rad50/SbcC-type AAA domain YPTS_0957 IPR004593 Nuclease SbcCD subunit D YPTS_0957 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPTS_0957 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain YPTS_0957 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTS_0957 IPR029052 Metallo-dependent phosphatase-like YPTS_0958 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_0958 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_0958 IPR039420 Transcriptional regulatory protein WalR-like YPTS_0958 IPR001789 Signal transduction response regulator, receiver domain YPTS_0958 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPTS_0958 IPR011006 CheY-like superfamily YPTS_0959 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPTS_0959 IPR021766 Phosphate regulon sensor protein PhoR YPTS_0959 IPR013767 PAS fold YPTS_0959 IPR035965 PAS domain superfamily YPTS_0959 IPR000014 PAS domain YPTS_0959 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_0959 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_0959 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_0959 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_0959 IPR005467 Histidine kinase domain YPTS_0959 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_0960 IPR011862 Phosphate binding protein YPTS_0960 IPR024370 PBP domain YPTS_0961 IPR004685 Branched-chain amino acid transport system II carrier protein YPTS_0962 IPR004841 Amino acid permease/ SLC12A domain YPTS_0962 IPR004840 Amino acid permease, conserved site YPTS_0963 IPR017069 Maltodextrin glucosidase YPTS_0963 IPR014756 Immunoglobulin E-set YPTS_0963 IPR017853 Glycoside hydrolase superfamily YPTS_0963 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPTS_0963 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTS_0963 IPR013780 Glycosyl hydrolase, all-beta YPTS_0964 IPR036291 NAD(P)-binding domain superfamily YPTS_0964 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_0964 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTS_0964 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_0965 IPR000101 Gamma-glutamyltranspeptidase YPTS_0965 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_0966 IPR013766 Thioredoxin domain YPTS_0966 IPR036249 Thioredoxin-like superfamily YPTS_0966 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTS_0966 IPR024706 Peroxiredoxin, AhpC-type YPTS_0966 IPR019479 Peroxiredoxin, C-terminal YPTS_0967 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPTS_0967 IPR007431 Acyl carrier protein phosphodiesterase YPTS_0968 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily YPTS_0968 IPR042119 QueA, domain 2 YPTS_0968 IPR042118 QueA, domain 1 YPTS_0968 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPTS_0969 IPR002616 tRNA-guanine(15) transglycosylase-like YPTS_0969 IPR004803 tRNA-guanine transglycosylase YPTS_0969 IPR036511 Queuine tRNA-ribosyltransferase-like YPTS_0970 IPR003849 Preprotein translocase YajC YPTS_0971 IPR027398 SecD export protein N-terminal TM domain YPTS_0971 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTS_0971 IPR005791 Protein translocase subunit SecD YPTS_0971 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTS_0971 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTS_0972 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPTS_0972 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPTS_0972 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPTS_0972 IPR005665 Protein-export membrane protein SecF, bacterial YPTS_0974 IPR005144 ATP-cone domain YPTS_0974 IPR003796 Ribonucleotide reductase regulator NrdR-like YPTS_0975 IPR024072 Dihydrofolate reductase-like domain superfamily YPTS_0975 IPR016193 Cytidine deaminase-like YPTS_0975 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTS_0975 IPR011549 Riboflavin-specific deaminase, C-terminal YPTS_0975 IPR004794 Riboflavin biosynthesis protein RibD YPTS_0975 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPTS_0975 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTS_0976 IPR002180 Lumazine/riboflavin synthase YPTS_0976 IPR034964 Lumazine synthase YPTS_0976 IPR036467 Lumazine/riboflavin synthase superfamily YPTS_0977 IPR006027 NusB/RsmB/TIM44 YPTS_0977 IPR011605 NusB antitermination factor YPTS_0977 IPR035926 NusB-like superfamily YPTS_0978 IPR016188 PurM-like, N-terminal domain YPTS_0978 IPR036676 PurM-like, C-terminal domain superfamily YPTS_0978 IPR006283 Thiamine-monophosphate kinase YPTS_0978 IPR036921 PurM-like, N-terminal domain superfamily YPTS_0978 IPR010918 PurM-like, C-terminal domain YPTS_0979 IPR007686 YutG/PgpA domain YPTS_0979 IPR026037 Phosphatidylglycerophosphatase A YPTS_0979 IPR036681 PgpA-like superfamily YPTS_0980 IPR020826 Transketolase binding site YPTS_0980 IPR005474 Transketolase, N-terminal YPTS_0980 IPR005475 Transketolase-like, pyrimidine-binding domain YPTS_0980 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTS_0980 IPR029061 Thiamin diphosphate-binding fold YPTS_0980 IPR005477 Deoxyxylulose-5-phosphate synthase YPTS_0980 IPR033248 Transketolase, C-terminal domain YPTS_0981 IPR033749 Polyprenyl synthetase, conserved site YPTS_0981 IPR008949 Isoprenoid synthase domain superfamily YPTS_0981 IPR000092 Polyprenyl synthetase YPTS_0982 IPR037004 Exonuclease VII, small subunit superfamily YPTS_0982 IPR003761 Exonuclease VII, small subunit YPTS_0984 IPR004114 THUMP domain YPTS_0984 IPR020536 Thil, AANH domain YPTS_0984 IPR001763 Rhodanese-like domain YPTS_0984 IPR003720 tRNA sulfurtransferase ThiI YPTS_0984 IPR026340 Thiazole biosynthesis domain YPTS_0984 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_0984 IPR036873 Rhodanese-like domain superfamily YPTS_0985 IPR002818 DJ-1/PfpI YPTS_0985 IPR029062 Class I glutamine amidotransferase-like YPTS_0985 IPR006287 Protein/nucleic acid deglycase DJ-1 YPTS_0986 IPR036291 NAD(P)-binding domain superfamily YPTS_0986 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_0986 IPR003710 Ketopantoate reductase ApbA/PanE YPTS_0986 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_0986 IPR013332 Ketopantoate reductase, N-terminal domain YPTS_0986 IPR013752 Ketopantoate reductase, C-terminal domain YPTS_0987 IPR036183 YajQ-like superfamily YPTS_0987 IPR035570 UPF0234, N-terminal YPTS_0987 IPR007551 Protein of unknown function DUF520 YPTS_0987 IPR035571 UPF0234-like, C-terminal YPTS_0988 IPR020846 Major facilitator superfamily domain YPTS_0988 IPR011701 Major facilitator superfamily YPTS_0988 IPR036259 MFS transporter superfamily YPTS_0989 IPR006369 Protohaem IX farnesyltransferase YPTS_0989 IPR000537 UbiA prenyltransferase family YPTS_0989 IPR030470 UbiA prenyltransferase conserved site YPTS_0990 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPTS_0990 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPTS_0991 IPR033946 Ubiquinol oxidase subunit III domain YPTS_0991 IPR000298 Cytochrome c oxidase subunit III-like YPTS_0991 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPTS_0991 IPR035973 Cytochrome c oxidase subunit III-like superfamily YPTS_0991 IPR024791 Cytochrome c oxidase subunit III YPTS_0991 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPTS_0992 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPTS_0992 IPR023616 Cytochrome c oxidase-like, subunit I domain YPTS_0992 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPTS_0992 IPR000883 Cytochrome c oxidase subunit I YPTS_0992 IPR036927 Cytochrome c oxidase-like, subunit I superfamily YPTS_0993 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain YPTS_0993 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily YPTS_0993 IPR002429 Cytochrome c oxidase subunit II-like C-terminal YPTS_0993 IPR010514 COX aromatic rich motif YPTS_0993 IPR008972 Cupredoxin YPTS_0993 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YPTS_0993 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPTS_0994 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily YPTS_0994 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPTS_0995 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPTS_0995 IPR036259 MFS transporter superfamily YPTS_0995 IPR011701 Major facilitator superfamily YPTS_0995 IPR020846 Major facilitator superfamily domain YPTS_0996 IPR012640 Membrane lipoprotein, lipid attachment site YPTS_0996 IPR005619 Uncharacterised protein family, YajG YPTS_0997 IPR002634 BolA protein YPTS_0997 IPR036065 BolA-like superfamily YPTS_0999 IPR008880 Trigger factor, C-terminal YPTS_0999 IPR037041 Trigger factor, C-terminal domain superfamily YPTS_0999 IPR008881 Trigger factor, ribosome-binding, bacterial YPTS_0999 IPR036611 Trigger factor ribosome-binding domain superfamily YPTS_0999 IPR027304 Trigger factor/SurA domain superfamily YPTS_0999 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTS_0999 IPR005215 Trigger factor YPTS_1000 IPR033135 ClpP, histidine active site YPTS_1000 IPR018215 ClpP, Ser active site YPTS_1000 IPR029045 ClpP/crotonase-like domain superfamily YPTS_1000 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPTS_1000 IPR001907 ATP-dependent Clp protease proteolytic subunit YPTS_1001 IPR010603 Zinc finger, ClpX C4-type YPTS_1001 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1001 IPR004487 Clp protease, ATP-binding subunit ClpX YPTS_1001 IPR003959 ATPase, AAA-type, core YPTS_1001 IPR038366 Zinc finger, ClpX C4-type superfamily YPTS_1001 IPR003593 AAA+ ATPase domain YPTS_1001 IPR019489 Clp ATPase, C-terminal YPTS_1002 IPR015947 PUA-like superfamily YPTS_1002 IPR003111 Lon, substrate-binding domain YPTS_1002 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1002 IPR008268 Peptidase S16, active site YPTS_1002 IPR003593 AAA+ ATPase domain YPTS_1002 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1002 IPR027065 Lon protease YPTS_1002 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_1002 IPR008269 Peptidase S16, Lon proteolytic domain YPTS_1002 IPR027543 Lon protease, bacterial YPTS_1002 IPR003959 ATPase, AAA-type, core YPTS_1002 IPR004815 Lon protease, bacterial/eukaryotic-type YPTS_1003 IPR020816 Histone-like DNA-binding protein, conserved site YPTS_1003 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTS_1003 IPR000119 Histone-like DNA-binding protein YPTS_1004 IPR027304 Trigger factor/SurA domain superfamily YPTS_1004 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPTS_1004 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPTS_1005 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPTS_1005 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTS_1005 IPR010994 RuvA domain 2-like YPTS_1006 IPR029069 HotDog domain superfamily YPTS_1006 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPTS_1007 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1007 IPR018317 Queuosine biosynthesis protein QueC YPTS_1008 IPR039424 Solute-binding protein family 5 YPTS_1008 IPR000914 Solute-binding protein family 5 domain YPTS_1008 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPTS_1009 IPR023938 HMP-PP phosphatase YPTS_1009 IPR023214 HAD superfamily YPTS_1009 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTS_1009 IPR000150 Cof family YPTS_1009 IPR036412 HAD-like superfamily YPTS_1010 IPR005859 Cysteine synthase CysK YPTS_1010 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTS_1010 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_1010 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_1010 IPR005856 Cysteine synthase YPTS_1011 IPR011991 ArsR-like helix-turn-helix domain YPTS_1011 IPR000485 AsnC-type HTH domain YPTS_1011 IPR019888 Transcription regulator AsnC-type YPTS_1011 IPR011008 Dimeric alpha-beta barrel YPTS_1011 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTS_1011 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1011 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1011 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTS_1012 IPR003439 ABC transporter-like YPTS_1012 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1012 IPR003593 AAA+ ATPase domain YPTS_1012 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1012 IPR017871 ABC transporter, conserved site YPTS_1012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1012 IPR039421 Type I protein exporter YPTS_1013 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1013 IPR003439 ABC transporter-like YPTS_1013 IPR017871 ABC transporter, conserved site YPTS_1013 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1013 IPR003593 AAA+ ATPase domain YPTS_1013 IPR039421 Type I protein exporter YPTS_1013 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1014 IPR002187 Nitrogen regulatory protein PII YPTS_1014 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTS_1014 IPR017918 Nitrogen regulatory protein PII, conserved site YPTS_1014 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTS_1014 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPTS_1015 IPR018047 Ammonium transporter, conserved site YPTS_1015 IPR001905 Ammonium transporter YPTS_1015 IPR024041 Ammonium transporter AmtB-like domain YPTS_1015 IPR029020 Ammonium/urea transporter YPTS_1017 IPR029069 HotDog domain superfamily YPTS_1017 IPR003703 Acyl-CoA thioesterase YPTS_1018 IPR039366 YscW/ExsB YPTS_1019 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTS_1019 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTS_1019 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1020 IPR007985 Haemolysin expression modulating, HHA YPTS_1020 IPR036666 HHA superfamily YPTS_1021 IPR019693 Biofilm formation regulator YbaJ YPTS_1023 IPR000473 Ribosomal protein L36 YPTS_1023 IPR035977 Ribosomal protein L36 superfamily YPTS_1024 IPR002150 Ribosomal protein L31 YPTS_1024 IPR027493 Ribosomal protein L31 type B YPTS_1024 IPR034704 L28p-like YPTS_1024 IPR042105 Ribosomal protein L31 superfamily YPTS_1025 IPR001036 Acriflavin resistance protein YPTS_1025 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_1025 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTS_1026 IPR006143 RND efflux pump, membrane fusion protein YPTS_1026 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_1027 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_1027 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTS_1027 IPR013572 Transcription regulator MAATS, C-terminal YPTS_1027 IPR009057 Homeobox-like domain superfamily YPTS_1027 IPR001647 DNA-binding HTH domain, TetR-type YPTS_1028 IPR027396 DsrEFH-like YPTS_1028 IPR003787 Sulphur relay, DsrE/F-like protein YPTS_1029 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTS_1029 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPTS_1029 IPR006685 Mechanosensitive ion channel MscS YPTS_1029 IPR010920 LSM domain superfamily YPTS_1029 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_1029 IPR024393 Mechanosensitive ion channel MscS, porin domain YPTS_1029 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTS_1029 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTS_1029 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTS_1030 IPR019630 Protein of unknown function DUF2496, YbaM-related YPTS_1034 IPR005764 Adenine phosphoribosyl transferase YPTS_1034 IPR029057 Phosphoribosyltransferase-like YPTS_1034 IPR000836 Phosphoribosyltransferase domain YPTS_1035 IPR012763 DNA polymerase III, subunit gamma/ tau YPTS_1035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1035 IPR001270 ClpA/B family YPTS_1035 IPR003593 AAA+ ATPase domain YPTS_1035 IPR022754 DNA polymerase III, gamma subunit, domain III YPTS_1035 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPTS_1035 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTS_1035 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily YPTS_1035 IPR021029 DNA polymerase III, tau subunit, domain V YPTS_1036 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YPTS_1036 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPTS_1037 IPR000093 DNA recombination protein RecR YPTS_1037 IPR015967 Recombination protein RecR, conserved site YPTS_1037 IPR034137 RecR, TOPRIM domain YPTS_1037 IPR023627 Recombination protein RecR YPTS_1037 IPR006171 TOPRIM domain YPTS_1037 IPR023628 Recombination protein RecR, C4-type zinc finger YPTS_1038 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_1038 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_1038 IPR037196 HSP90, C-terminal domain YPTS_1038 IPR001404 Heat shock protein Hsp90 family YPTS_1038 IPR020575 Heat shock protein Hsp90, N-terminal YPTS_1038 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1038 IPR019805 Heat shock protein Hsp90, conserved site YPTS_1039 IPR007862 Adenylate kinase, active site lid domain YPTS_1039 IPR000850 Adenylate kinase/UMP-CMP kinase YPTS_1039 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1039 IPR033690 Adenylate kinase, conserved site YPTS_1039 IPR006259 Adenylate kinase subfamily YPTS_1040 IPR033659 Ferrochelatase, N-terminal YPTS_1040 IPR033644 Ferrochelatase, C-terminal YPTS_1040 IPR019772 Ferrochelatase, active site YPTS_1040 IPR001015 Ferrochelatase YPTS_1041 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_1041 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_1041 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_1041 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_1041 IPR017938 Riboflavin synthase-like beta-barrel YPTS_1041 IPR012675 Beta-grasp domain superfamily YPTS_1041 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTS_1041 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_1041 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_1042 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_1042 IPR005835 Nucleotidyl transferase domain YPTS_1042 IPR013446 Glucose-1-phosphate cytidylyltransferase YPTS_1043 IPR036291 NAD(P)-binding domain superfamily YPTS_1043 IPR016040 NAD(P)-binding domain YPTS_1043 IPR013445 CDP-glucose 4,6-dehydratase YPTS_1044 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1044 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1044 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTS_1044 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1045 IPR001509 NAD-dependent epimerase/dehydratase YPTS_1045 IPR036291 NAD(P)-binding domain superfamily YPTS_1053 IPR005793 Formyl transferase, C-terminal YPTS_1053 IPR001509 NAD-dependent epimerase/dehydratase YPTS_1053 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPTS_1053 IPR036291 NAD(P)-binding domain superfamily YPTS_1053 IPR036477 Formyl transferase, N-terminal domain superfamily YPTS_1053 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPTS_1053 IPR002376 Formyl transferase, N-terminal YPTS_1054 IPR005888 dTDP-glucose 4,6-dehydratase YPTS_1054 IPR016040 NAD(P)-binding domain YPTS_1054 IPR036291 NAD(P)-binding domain superfamily YPTS_1055 IPR001174 Galactokinase/homoserine kinase YPTS_1055 IPR013750 GHMP kinase, C-terminal domain YPTS_1055 IPR036554 GHMP kinase, C-terminal domain superfamily YPTS_1055 IPR006204 GHMP kinase N-terminal domain YPTS_1055 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1055 IPR014606 D,D-heptose 7-phosphate kinase YPTS_1056 IPR001347 Sugar isomerase (SIS) YPTS_1056 IPR004515 Phosphoheptose isomerase YPTS_1056 IPR035461 GmhA/DiaA YPTS_1057 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_1057 IPR005835 Nucleotidyl transferase domain YPTS_1058 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPTS_1058 IPR023214 HAD superfamily YPTS_1058 IPR006543 Histidinol-phosphate phosphatase YPTS_1058 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTS_1058 IPR036412 HAD-like superfamily YPTS_1060 IPR003856 Polysaccharide chain length determinant N-terminal domain YPTS_1061 IPR029056 Ribokinase-like YPTS_1061 IPR011611 Carbohydrate kinase PfkB YPTS_1061 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_1062 IPR003148 Regulator of K+ conductance, N-terminal YPTS_1062 IPR036291 NAD(P)-binding domain superfamily YPTS_1062 IPR006153 Cation/H+ exchanger YPTS_1062 IPR004771 K+/H+ exchanger YPTS_1062 IPR038770 Sodium/solute symporter superfamily YPTS_1063 IPR011701 Major facilitator superfamily YPTS_1063 IPR036259 MFS transporter superfamily YPTS_1063 IPR020846 Major facilitator superfamily domain YPTS_1068 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPTS_1068 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPTS_1068 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPTS_1069 IPR002816 TraB family YPTS_1070 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_1070 IPR023214 HAD superfamily YPTS_1070 IPR018303 P-type ATPase, phosphorylation site YPTS_1070 IPR006121 Heavy metal-associated domain, HMA YPTS_1070 IPR036163 Heavy metal-associated domain superfamily YPTS_1070 IPR027256 P-type ATPase, subfamily IB YPTS_1070 IPR001757 P-type ATPase YPTS_1070 IPR017969 Heavy-metal-associated, conserved site YPTS_1070 IPR036412 HAD-like superfamily YPTS_1070 IPR008250 P-type ATPase, A domain superfamily YPTS_1070 IPR023299 P-type ATPase, cytoplasmic domain N YPTS_1071 IPR000551 MerR-type HTH domain YPTS_1071 IPR011789 Cu(I)-responsive transcriptional regulator YPTS_1071 IPR009061 Putative DNA-binding domain superfamily YPTS_1072 IPR002810 NfeD-like, C-terminal domain YPTS_1073 IPR018080 Band 7/stomatin-like, conserved site YPTS_1073 IPR032435 Band 7, C-terminal extension YPTS_1073 IPR001972 Stomatin family YPTS_1073 IPR036013 Band 7/SPFH domain superfamily YPTS_1073 IPR001107 Band 7 domain YPTS_1074 IPR036249 Thioredoxin-like superfamily YPTS_1074 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_1074 IPR013766 Thioredoxin domain YPTS_1075 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1075 IPR036291 NAD(P)-binding domain superfamily YPTS_1075 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1076 IPR008265 Lipase, GDSL, active site YPTS_1076 IPR013830 SGNH hydrolase-type esterase domain YPTS_1076 IPR036514 SGNH hydrolase superfamily YPTS_1077 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1077 IPR017871 ABC transporter, conserved site YPTS_1077 IPR003439 ABC transporter-like YPTS_1077 IPR003593 AAA+ ATPase domain YPTS_1078 IPR038766 Membrane component of ABC transporter, predicted YPTS_1079 IPR011761 ATP-grasp fold YPTS_1079 IPR011054 Rudiment single hybrid motif YPTS_1079 IPR016185 Pre-ATP-grasp domain superfamily YPTS_1079 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPTS_1079 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPTS_1079 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain YPTS_1079 IPR013815 ATP-grasp fold, subdomain 1 YPTS_1080 IPR035893 PurE domain superfamily YPTS_1080 IPR033747 Class I PurE YPTS_1080 IPR000031 PurE domain YPTS_1080 IPR024694 PurE, prokaryotic type YPTS_1081 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPTS_1081 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTS_1081 IPR029052 Metallo-dependent phosphatase-like YPTS_1082 IPR029000 Cyclophilin-like domain superfamily YPTS_1082 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPTS_1082 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPTS_1082 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPTS_1083 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_1083 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPTS_1083 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1083 IPR032678 tRNA synthetases class I, catalytic domain YPTS_1083 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPTS_1083 IPR015803 Cysteine-tRNA ligase YPTS_1084 IPR002942 RNA-binding S4 domain YPTS_1084 IPR036986 RNA-binding S4 domain superfamily YPTS_1085 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPTS_1085 IPR036291 NAD(P)-binding domain superfamily YPTS_1085 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPTS_1085 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPTS_1085 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPTS_1092 IPR000462 CDP-alcohol phosphatidyltransferase YPTS_1093 IPR000374 Phosphatidate cytidylyltransferase YPTS_1094 IPR016676 Phospholipid/glycerol acyltransferase, predicted YPTS_1094 IPR002123 Phospholipid/glycerol acyltransferase YPTS_1095 IPR022742 Serine aminopeptidase, S33 YPTS_1095 IPR022744 Methyltransferase domain, putative YPTS_1095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1095 IPR029058 Alpha/Beta hydrolase fold YPTS_1096 IPR000340 Dual specificity phosphatase, catalytic domain YPTS_1096 IPR029021 Protein-tyrosine phosphatase-like YPTS_1096 IPR016130 Protein-tyrosine phosphatase, active site YPTS_1096 IPR003595 Protein-tyrosine phosphatase, catalytic YPTS_1096 IPR000387 Tyrosine specific protein phosphatases domain YPTS_1096 IPR020422 Dual specificity protein phosphatase domain YPTS_1099 IPR000847 Transcription regulator HTH, LysR YPTS_1099 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1099 IPR005119 LysR, substrate-binding YPTS_1099 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1100 IPR023210 NADP-dependent oxidoreductase domain YPTS_1100 IPR020471 Aldo/keto reductase YPTS_1100 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_1101 IPR023210 NADP-dependent oxidoreductase domain YPTS_1101 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_1101 IPR018170 Aldo/keto reductase, conserved site YPTS_1101 IPR020471 Aldo/keto reductase YPTS_1109 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTS_1109 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTS_1109 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_1109 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_1109 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTS_1109 IPR002942 RNA-binding S4 domain YPTS_1109 IPR036986 RNA-binding S4 domain superfamily YPTS_1110 IPR003347 JmjC domain YPTS_1110 IPR039994 JmjC domain-containing YPTS_1113 IPR005546 Autotransporter beta-domain YPTS_1113 IPR030930 Adhesin of bacterial autotransporter system YPTS_1113 IPR003991 Pertactin virulence factor family YPTS_1113 IPR004899 Pertactin, central region YPTS_1113 IPR011050 Pectin lyase fold/virulence factor YPTS_1113 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_1113 IPR006315 Outer membrane autotransporter barrel YPTS_1113 IPR036709 Autotransporter beta-domain superfamily YPTS_1113 IPR024973 ESPR domain YPTS_1116 IPR036624 Hcp1-like superfamily YPTS_1116 IPR008514 Type VI secretion system effector, Hcp YPTS_1121 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_1121 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPTS_1122 IPR001460 Penicillin-binding protein, transpeptidase YPTS_1122 IPR036950 Penicillin binding protein transglycosylase domain YPTS_1122 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1122 IPR023346 Lysozyme-like domain superfamily YPTS_1122 IPR011815 Penicillin-binding protein 1C YPTS_1122 IPR001264 Glycosyl transferase, family 51 YPTS_1122 IPR009647 Penicillin-binding, C-terminal YPTS_1123 IPR001599 Alpha-2-macroglobulin YPTS_1123 IPR002890 Macroglobulin domain YPTS_1123 IPR011625 Alpha-2-macroglobulin, bait region domain YPTS_1123 IPR021868 Alpha-2-macroglobulin MG3 domain YPTS_1123 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain YPTS_1123 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain YPTS_1123 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain YPTS_1123 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPTS_1126 IPR015590 Aldehyde dehydrogenase domain YPTS_1126 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_1126 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1126 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_1126 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPTS_1126 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_1127 IPR029061 Thiamin diphosphate-binding fold YPTS_1127 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTS_1127 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes YPTS_1127 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_1127 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase YPTS_1127 IPR000399 TPP-binding enzyme, conserved site YPTS_1127 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_1127 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_1129 IPR004104 Oxidoreductase, C-terminal YPTS_1129 IPR030827 Inositol 2-dehydrogenase YPTS_1129 IPR000683 Oxidoreductase, N-terminal YPTS_1129 IPR036291 NAD(P)-binding domain superfamily YPTS_1130 IPR025997 Periplasmic binding protein YPTS_1130 IPR028082 Periplasmic binding protein-like I YPTS_1131 IPR003593 AAA+ ATPase domain YPTS_1131 IPR015861 ABC transporter, ribose import, RbsA YPTS_1131 IPR017871 ABC transporter, conserved site YPTS_1131 IPR003439 ABC transporter-like YPTS_1131 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1132 IPR001851 ABC transporter, permease YPTS_1133 IPR004104 Oxidoreductase, C-terminal YPTS_1133 IPR030827 Inositol 2-dehydrogenase YPTS_1133 IPR036291 NAD(P)-binding domain superfamily YPTS_1133 IPR000683 Oxidoreductase, N-terminal YPTS_1134 IPR011611 Carbohydrate kinase PfkB YPTS_1134 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily YPTS_1134 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes YPTS_1134 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_1134 IPR030830 5-Dehydro-2-deoxygluconokinase YPTS_1134 IPR029056 Ribokinase-like YPTS_1135 IPR013022 Xylose isomerase-like, TIM barrel domain YPTS_1135 IPR030823 IolE/MocC family YPTS_1135 IPR036237 Xylose isomerase-like superfamily YPTS_1136 IPR021120 KduI/IolB isomerase YPTS_1136 IPR024203 5-deoxy-glucuronate isomerase, IolB YPTS_1136 IPR011051 RmlC-like cupin domain superfamily YPTS_1136 IPR014710 RmlC-like jelly roll fold YPTS_1136 IPR023770 5-deoxy-glucuronate isomerase, Bacilli YPTS_1138 IPR039421 Type I protein exporter YPTS_1138 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1138 IPR017871 ABC transporter, conserved site YPTS_1138 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1138 IPR003593 AAA+ ATPase domain YPTS_1138 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1138 IPR003439 ABC transporter-like YPTS_1142 IPR000792 Transcription regulator LuxR, C-terminal YPTS_1142 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1143 IPR019844 Cold-shock (CSD) domain YPTS_1143 IPR002059 Cold-shock protein, DNA-binding YPTS_1143 IPR012340 Nucleic acid-binding, OB-fold YPTS_1143 IPR011129 Cold shock domain YPTS_1143 IPR012156 Cold shock, CspA YPTS_1144 IPR002059 Cold-shock protein, DNA-binding YPTS_1144 IPR012156 Cold shock, CspA YPTS_1144 IPR011129 Cold shock domain YPTS_1144 IPR019844 Cold-shock (CSD) domain YPTS_1144 IPR012340 Nucleic acid-binding, OB-fold YPTS_1145 IPR003691 Putative fluoride ion transporter CrcB YPTS_1147 IPR003369 Sec-independent protein translocase protein TatA/B/E YPTS_1147 IPR024905 Sec-independent protein translocase protein TatE YPTS_1147 IPR006312 Sec-independent protein translocase protein TatA/E YPTS_1148 IPR003698 Lipoyl synthase YPTS_1148 IPR013785 Aldolase-type TIM barrel YPTS_1148 IPR007197 Radical SAM YPTS_1148 IPR006638 Elp3/MiaB/NifB YPTS_1148 IPR031691 Lipoyl synthase, N-terminal YPTS_1149 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTS_1149 IPR020605 Octanoyltransferase, conserved site YPTS_1149 IPR000544 Octanoyltransferase YPTS_1150 IPR007454 Uncharacterised protein family UPF0250 YPTS_1150 IPR027471 YbeD-like domain superfamily YPTS_1151 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTS_1151 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1151 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPTS_1151 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTS_1151 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPTS_1151 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPTS_1152 IPR036680 Sporulation-like domain superfamily YPTS_1152 IPR034718 Endolytic peptidoglycan transglycosylase RlpA YPTS_1152 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPTS_1152 IPR036908 RlpA-like domain superfamily YPTS_1152 IPR012997 Rare lipoprotein A YPTS_1152 IPR007730 Sporulation-like domain YPTS_1153 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB YPTS_1153 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPTS_1153 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPTS_1154 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPTS_1154 IPR001460 Penicillin-binding protein, transpeptidase YPTS_1154 IPR017790 Penicillin-binding protein 2 YPTS_1154 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1154 IPR005311 Penicillin-binding protein, dimerisation domain YPTS_1155 IPR029028 Alpha/beta knot methyltransferases YPTS_1155 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_1155 IPR003742 RNA methyltransferase RlmH YPTS_1156 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPTS_1157 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1157 IPR004821 Cytidyltransferase-like domain YPTS_1157 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase YPTS_1158 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTS_1158 IPR032780 DNA polymerase III subunit delta, C-terminal YPTS_1158 IPR010372 DNA polymerase III delta, N-terminal YPTS_1158 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1158 IPR005790 DNA polymerase III, delta subunit YPTS_1159 IPR007485 LPS-assembly lipoprotein LptE YPTS_1160 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPTS_1160 IPR025709 Leucyl-tRNA synthetase, editing domain YPTS_1160 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPTS_1160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1160 IPR002302 Leucine-tRNA ligase YPTS_1160 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPTS_1160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_1160 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_1161 IPR009912 Zinc-ribbon containing domain YPTS_1162 IPR003593 AAA+ ATPase domain YPTS_1162 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTS_1162 IPR003439 ABC transporter-like YPTS_1162 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1162 IPR017871 ABC transporter, conserved site YPTS_1163 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM YPTS_1163 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1163 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_1163 IPR035906 MetI-like superfamily YPTS_1164 IPR035906 MetI-like superfamily YPTS_1164 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1164 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ YPTS_1164 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_1165 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_1166 IPR036526 Carbon-nitrogen hydrolase superfamily YPTS_1166 IPR004563 Apolipoprotein N-acyltransferase YPTS_1166 IPR003010 Carbon-nitrogen hydrolase YPTS_1167 IPR000644 CBS domain YPTS_1167 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_1167 IPR005170 Transporter-associated domain YPTS_1167 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_1168 IPR002036 Endoribonuclease YbeY YPTS_1168 IPR020549 Endoribonuclease YbeY, conserved site YPTS_1168 IPR023091 Metalloprotease catalytic domain superfamily, predicted YPTS_1169 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1169 IPR003714 PhoH-like protein YPTS_1170 IPR007197 Radical SAM YPTS_1170 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_1170 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB YPTS_1170 IPR038135 Methylthiotransferase, N-terminal domain superfamily YPTS_1170 IPR020612 Methylthiotransferase, conserved site YPTS_1170 IPR002792 TRAM domain YPTS_1170 IPR013848 Methylthiotransferase, N-terminal YPTS_1170 IPR006638 Elp3/MiaB/NifB YPTS_1170 IPR005839 Methylthiotransferase YPTS_1171 IPR002938 FAD-binding domain YPTS_1171 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_1171 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTS_1171 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTS_1173 IPR017932 Glutamine amidotransferase type 2 domain YPTS_1173 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPTS_1173 IPR001962 Asparagine synthase YPTS_1173 IPR033738 Asparagine synthase, N-terminal domain YPTS_1173 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1173 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_1174 IPR036412 HAD-like superfamily YPTS_1174 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPTS_1174 IPR023214 HAD superfamily YPTS_1175 IPR000835 MarR-type HTH domain YPTS_1175 IPR000600 ROK family YPTS_1175 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1175 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1176 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_1176 IPR032466 Metal-dependent hydrolase YPTS_1176 IPR006680 Amidohydrolase-related YPTS_1176 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPTS_1177 IPR037171 NagB/RpiA transferase-like YPTS_1177 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPTS_1177 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPTS_1177 IPR004547 Glucosamine-6-phosphate isomerase YPTS_1178 IPR011055 Duplicated hybrid motif YPTS_1178 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTS_1178 IPR001996 Phosphotransferase system, IIB component, type 1 YPTS_1178 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPTS_1178 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPTS_1178 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTS_1178 IPR003352 Phosphotransferase system, EIIC YPTS_1178 IPR036878 Glucose permease domain IIB YPTS_1179 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPTS_1179 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPTS_1179 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1179 IPR022861 Glutamine-tRNA ligase, bacterial YPTS_1179 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTS_1179 IPR004514 Glutamine-tRNA synthetase YPTS_1179 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily YPTS_1179 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPTS_1179 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_1179 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTS_1180 IPR005318 Outer membrane porin, bacterial YPTS_1180 IPR023614 Porin domain superfamily YPTS_1181 IPR012291 CBM2, carbohydrate-binding domain superfamily YPTS_1181 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain YPTS_1181 IPR013783 Immunoglobulin-like fold YPTS_1181 IPR029018 Beta-hexosaminidase-like, domain 2 YPTS_1181 IPR004867 Chitobiase C-terminal domain YPTS_1181 IPR014756 Immunoglobulin E-set YPTS_1181 IPR025705 Beta-hexosaminidase YPTS_1181 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YPTS_1181 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily YPTS_1181 IPR015883 Glycoside hydrolase family 20, catalytic domain YPTS_1181 IPR017853 Glycoside hydrolase superfamily YPTS_1182 IPR002481 Ferric-uptake regulator YPTS_1182 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1182 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1183 IPR029039 Flavoprotein-like superfamily YPTS_1183 IPR010086 Flavodoxin, long chain YPTS_1183 IPR001226 Flavodoxin, conserved site YPTS_1183 IPR008254 Flavodoxin/nitric oxide synthase YPTS_1184 IPR010985 Ribbon-helix-helix YPTS_1184 IPR002145 Ribbon-helix-helix protein, CopG YPTS_1187 IPR029058 Alpha/Beta hydrolase fold YPTS_1187 IPR000073 Alpha/beta hydrolase fold-1 YPTS_1190 IPR010998 Integrase/recombinase, N-terminal YPTS_1190 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_1190 IPR025166 Integrase, DNA-binding domain YPTS_1190 IPR002104 Integrase, catalytic domain YPTS_1190 IPR038488 Integrase, DNA-binding domain superfamily YPTS_1190 IPR013762 Integrase-like, catalytic domain superfamily YPTS_1191 IPR009057 Homeobox-like domain superfamily YPTS_1191 IPR002514 Transposase IS3/IS911family YPTS_1192 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_1192 IPR002104 Integrase, catalytic domain YPTS_1192 IPR013762 Integrase-like, catalytic domain superfamily YPTS_1192 IPR038488 Integrase, DNA-binding domain superfamily YPTS_1192 IPR010998 Integrase/recombinase, N-terminal YPTS_1192 IPR025166 Integrase, DNA-binding domain YPTS_1194 IPR009610 CbtA toxin of type IV toxin-antitoxin system YPTS_1195 IPR002611 IstB-like ATP-binding protein YPTS_1195 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1195 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_1195 IPR003593 AAA+ ATPase domain YPTS_1195 IPR001270 ClpA/B family YPTS_1196 IPR001584 Integrase, catalytic core YPTS_1196 IPR006120 Resolvase, HTH domain YPTS_1196 IPR017894 HTH domain, IS21 transposase-type YPTS_1196 IPR012337 Ribonuclease H-like superfamily YPTS_1196 IPR036397 Ribonuclease H superfamily YPTS_1197 IPR038025 Antitoxin CbeA superfamily YPTS_1197 IPR009320 Antitoxin CbeA YPTS_1198 IPR001405 Uncharacterised protein family UPF0758 YPTS_1198 IPR037518 MPN domain YPTS_1198 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTS_1198 IPR025657 RadC-like JAB domain YPTS_1199 IPR026325 Protein of unknown function DUF932 YPTS_1202 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1202 IPR006073 GTP binding domain YPTS_1203 IPR025048 Protein of unknown function DUF3987) YPTS_1211 IPR025166 Integrase, DNA-binding domain YPTS_1211 IPR010998 Integrase/recombinase, N-terminal YPTS_1211 IPR038488 Integrase, DNA-binding domain superfamily YPTS_1211 IPR002104 Integrase, catalytic domain YPTS_1211 IPR013762 Integrase-like, catalytic domain superfamily YPTS_1211 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_1212 IPR020081 SsrA-binding protein, conserved site YPTS_1212 IPR000037 SsrA-binding protein YPTS_1212 IPR023620 Small protein B YPTS_1213 IPR023393 START-like domain superfamily YPTS_1213 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPTS_1214 IPR005346 RnfH protein YPTS_1214 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTS_1214 IPR037021 RnfH superfamily YPTS_1215 IPR037873 BamE-like YPTS_1215 IPR026592 Outer membrane protein assembly factor BamE YPTS_1215 IPR007450 Lipoprotein SmpA/OmlA YPTS_1216 IPR004604 DNA recombination/repair protein RecN YPTS_1216 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1216 IPR003395 RecF/RecN/SMC, N-terminal YPTS_1217 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPTS_1217 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPTS_1217 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal YPTS_1217 IPR002504 NAD kinase YPTS_1218 IPR000740 GrpE nucleotide exchange factor YPTS_1218 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPTS_1218 IPR009012 GrpE nucleotide exchange factor, head YPTS_1219 IPR019810 Citrate synthase active site YPTS_1219 IPR016142 Citrate synthase-like, large alpha subdomain YPTS_1219 IPR016143 Citrate synthase-like, small alpha subdomain YPTS_1219 IPR002020 Citrate synthase YPTS_1219 IPR024176 Citrate synthase, bacterial-type YPTS_1219 IPR036969 Citrate synthase superfamily YPTS_1219 IPR010953 Citrate synthase, type I YPTS_1220 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPTS_1220 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTS_1220 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPTS_1220 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPTS_1221 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPTS_1221 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPTS_1221 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPTS_1222 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPTS_1222 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTS_1222 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTS_1222 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTS_1222 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPTS_1222 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_1222 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTS_1222 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPTS_1223 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPTS_1223 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_1223 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPTS_1223 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_1223 IPR012675 Beta-grasp domain superfamily YPTS_1223 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_1223 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_1223 IPR009051 Alpha-helical ferredoxin YPTS_1224 IPR005475 Transketolase-like, pyrimidine-binding domain YPTS_1224 IPR029061 Thiamin diphosphate-binding fold YPTS_1224 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain YPTS_1224 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily YPTS_1224 IPR011603 2-oxoglutarate dehydrogenase E1 component YPTS_1224 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal YPTS_1224 IPR001017 Dehydrogenase, E1 component YPTS_1225 IPR000089 Biotin/lipoyl attachment YPTS_1225 IPR004167 Peripheral subunit-binding domain YPTS_1225 IPR011053 Single hybrid motif YPTS_1225 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTS_1225 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_1225 IPR006255 Dihydrolipoamide succinyltransferase YPTS_1225 IPR036625 E3-binding domain superfamily YPTS_1225 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPTS_1226 IPR016102 Succinyl-CoA synthetase-like YPTS_1226 IPR011761 ATP-grasp fold YPTS_1226 IPR013815 ATP-grasp fold, subdomain 1 YPTS_1226 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPTS_1226 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPTS_1226 IPR005809 Succinate--CoA synthetase, beta subunit YPTS_1226 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPTS_1227 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YPTS_1227 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPTS_1227 IPR016102 Succinyl-CoA synthetase-like YPTS_1227 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPTS_1227 IPR005810 Succinyl-CoA ligase, alpha subunit YPTS_1227 IPR036291 NAD(P)-binding domain superfamily YPTS_1227 IPR003781 CoA-binding YPTS_1228 IPR002585 Cytochrome ubiquinol oxidase subunit 1 YPTS_1229 IPR003317 Cytochrome ubiquinol oxidase subunit 2 YPTS_1230 IPR011724 Cyd operon protein YbgT YPTS_1230 IPR012994 Membrane bound YbgT-like YPTS_1231 IPR011846 Cyd operon protein YbgE YPTS_1232 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPTS_1232 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPTS_1232 IPR029069 HotDog domain superfamily YPTS_1232 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site YPTS_1232 IPR006683 Thioesterase domain YPTS_1233 IPR002898 MotA/TolQ/ExbB proton channel YPTS_1233 IPR014163 Tol-Pal system, TolQ YPTS_1234 IPR003400 Biopolymer transport protein ExbD/TolR YPTS_1234 IPR014168 Tol-Pal system protein TolR YPTS_1235 IPR014161 Tol-Pal system, TolA YPTS_1235 IPR014161 Tol-Pal system, TolA YPTS_1236 IPR011659 WD40-like Beta Propeller YPTS_1236 IPR007195 TolB, N-terminal YPTS_1236 IPR036752 TolB, N-terminal domain superfamily YPTS_1236 IPR014167 Tol-Pal system protein TolB YPTS_1236 IPR011042 Six-bladed beta-propeller, TolB-like YPTS_1237 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal YPTS_1237 IPR006664 Outer membrane protein, bacterial YPTS_1237 IPR039001 Peptidoglycan-associated lipoprotein YPTS_1237 IPR006665 OmpA-like domain YPTS_1237 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_1237 IPR036737 OmpA-like domain superfamily YPTS_1238 IPR034706 Cell division coordinator CpoB YPTS_1238 IPR014162 Cell division coordinator CpoB, C-terminal YPTS_1238 IPR013026 Tetratricopeptide repeat-containing domain YPTS_1238 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_1238 IPR032519 YbgF, trimerisation domain YPTS_1238 IPR019734 Tetratricopeptide repeat YPTS_1239 IPR023513 Quinolinate synthase A, type 1 YPTS_1239 IPR036094 Quinolinate synthetase A superfamily YPTS_1239 IPR003473 Quinolinate synthetase A YPTS_1240 IPR006419 Nicotinamide mononucleotide transporter PnuC YPTS_1241 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPTS_1241 IPR027469 Cation efflux transmembrane domain superfamily YPTS_1241 IPR023500 Zinc transporter ZitB YPTS_1241 IPR002524 Cation efflux protein YPTS_1243 IPR006219 DHAP synthase, class 1 YPTS_1243 IPR006218 DAHP synthetase I/KDSA YPTS_1243 IPR013785 Aldolase-type TIM barrel YPTS_1244 IPR005952 Phosphoglycerate mutase 1 YPTS_1244 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPTS_1244 IPR029033 Histidine phosphatase superfamily YPTS_1244 IPR013078 Histidine phosphatase superfamily, clade-1 YPTS_1246 IPR018052 Aldose 1-epimerase, conserved site YPTS_1246 IPR013458 Aldose 1-epimerase, bacterial YPTS_1246 IPR015443 Aldose 1-epimerase YPTS_1246 IPR011013 Galactose mutarotase-like domain superfamily YPTS_1246 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTS_1246 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPTS_1247 IPR022963 Galactokinase, bacterial YPTS_1247 IPR006203 GHMP kinase, ATP-binding, conserved site YPTS_1247 IPR013750 GHMP kinase, C-terminal domain YPTS_1247 IPR019539 Galactokinase galactose-binding domain YPTS_1247 IPR006206 Mevalonate/galactokinase YPTS_1247 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1247 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_1247 IPR019741 Galactokinase, conserved site YPTS_1247 IPR000705 Galactokinase YPTS_1247 IPR006204 GHMP kinase N-terminal domain YPTS_1247 IPR036554 GHMP kinase, C-terminal domain superfamily YPTS_1248 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPTS_1248 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPTS_1248 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPTS_1248 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPTS_1248 IPR036265 HIT-like superfamily YPTS_1249 IPR016040 NAD(P)-binding domain YPTS_1249 IPR005886 UDP-glucose 4-epimerase YPTS_1249 IPR036291 NAD(P)-binding domain superfamily YPTS_1252 IPR003593 AAA+ ATPase domain YPTS_1252 IPR003439 ABC transporter-like YPTS_1252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1253 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1253 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1253 IPR003725 Molybdenum-binding protein ModE, N-terminal YPTS_1253 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_1253 IPR000847 Transcription regulator HTH, LysR YPTS_1253 IPR004606 Molybdenum-pterin binding YPTS_1253 IPR005116 Transport-associated OB, type 1 YPTS_1253 IPR016462 Molybdate-dependent transcriptional regulator ModE YPTS_1254 IPR019702 Multidrug efflux pump accessory protein AcrZ YPTS_1255 IPR005950 Molybdate ABC transporter, substrate-binding protein YPTS_1256 IPR035906 MetI-like superfamily YPTS_1256 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1256 IPR011867 Molybdate ABC transporter, permease protein YPTS_1257 IPR005116 Transport-associated OB, type 1 YPTS_1257 IPR003593 AAA+ ATPase domain YPTS_1257 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_1257 IPR003439 ABC transporter-like YPTS_1257 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1257 IPR017871 ABC transporter, conserved site YPTS_1257 IPR015852 ABC transporter, molybdenum import, ModC YPTS_1257 IPR011868 Molybdate ABC transporter, ATP-binding protein YPTS_1257 IPR004606 Molybdenum-pterin binding YPTS_1258 IPR000150 Cof family YPTS_1258 IPR036412 HAD-like superfamily YPTS_1258 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPTS_1258 IPR023214 HAD superfamily YPTS_1259 IPR011045 Nitrous oxide reductase, N-terminal YPTS_1259 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTS_1259 IPR022528 6-phosphogluconolactonase, YbhE-type YPTS_1259 IPR019405 Lactonase, 7-bladed beta propeller YPTS_1260 IPR005814 Aminotransferase class-III YPTS_1260 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPTS_1260 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1261 IPR010722 Biotin and thiamin synthesis-associated domain YPTS_1261 IPR024177 Biotin synthase YPTS_1261 IPR006638 Elp3/MiaB/NifB YPTS_1261 IPR007197 Radical SAM YPTS_1261 IPR013785 Aldolase-type TIM barrel YPTS_1261 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPTS_1262 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPTS_1262 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPTS_1262 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1262 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1262 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTS_1262 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1262 IPR004839 Aminotransferase, class I/classII YPTS_1263 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1263 IPR013216 Methyltransferase type 11 YPTS_1263 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPTS_1264 IPR004472 Dethiobiotin synthase BioD YPTS_1264 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1266 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_1266 IPR004807 UvrABC system, subunit B YPTS_1266 IPR041471 UvrB, interaction domain YPTS_1266 IPR024759 UvrB, YAD/RRR-motif-containing domain YPTS_1266 IPR036876 UVR domain superfamily YPTS_1266 IPR001943 UVR domain YPTS_1266 IPR006935 Helicase/UvrB, N-terminal YPTS_1266 IPR001650 Helicase, C-terminal YPTS_1266 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1267 IPR018668 DNA-binding protein VF530-like YPTS_1267 IPR036361 SAP domain superfamily YPTS_1268 IPR010119 Gluconeogenesis factor YPTS_1268 IPR038136 Gluconeogenesis factor superfamily YPTS_1268 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPTS_1270 IPR010505 Molybdenum cofactor synthesis C-terminal YPTS_1270 IPR007197 Radical SAM YPTS_1270 IPR013785 Aldolase-type TIM barrel YPTS_1270 IPR006638 Elp3/MiaB/NifB YPTS_1270 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPTS_1270 IPR013483 Molybdenum cofactor biosynthesis protein A YPTS_1271 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPTS_1271 IPR023045 Molybdenum cofactor biosynthesis C YPTS_1271 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily YPTS_1272 IPR012675 Beta-grasp domain superfamily YPTS_1272 IPR003749 Sulfur carrier ThiS/MoaD-like YPTS_1272 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPTS_1273 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily YPTS_1273 IPR003448 Molybdopterin biosynthesis MoaE YPTS_1274 IPR006214 Bax inhibitor 1-related YPTS_1275 IPR012132 Glucose-methanol-choline oxidoreductase YPTS_1275 IPR011533 Oxygen-dependent choline dehydrogenase YPTS_1275 IPR027424 Glucose Oxidase, domain 2 YPTS_1275 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_1275 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPTS_1275 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPTS_1276 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_1276 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_1276 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_1276 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_1276 IPR015590 Aldehyde dehydrogenase domain YPTS_1276 IPR011264 Betaine aldehyde dehydrogenase YPTS_1276 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1277 IPR001647 DNA-binding HTH domain, TetR-type YPTS_1277 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_1277 IPR009057 Homeobox-like domain superfamily YPTS_1277 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTS_1277 IPR017757 Transcriptional repressor BetI YPTS_1277 IPR039538 BetI-type transcriptional repressor, C-terminal YPTS_1278 IPR000060 BCCT transporter family YPTS_1278 IPR018093 BCCT transporter, conserved site YPTS_1279 IPR005119 LysR, substrate-binding YPTS_1279 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain YPTS_1279 IPR000847 Transcription regulator HTH, LysR YPTS_1279 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1279 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1281 IPR010943 Xanthosine phosphorylase YPTS_1281 IPR018099 Purine phosphorylase, family 2, conserved site YPTS_1281 IPR035994 Nucleoside phosphorylase superfamily YPTS_1281 IPR011268 Purine nucleoside phosphorylase YPTS_1281 IPR000845 Nucleoside phosphorylase domain YPTS_1282 IPR020846 Major facilitator superfamily domain YPTS_1282 IPR004740 Nucleoside:H+ symporter YPTS_1282 IPR036259 MFS transporter superfamily YPTS_1283 IPR025961 Heavy-metal resistance protein YPTS_1284 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_1284 IPR005467 Histidine kinase domain YPTS_1284 IPR029151 Periplasmic sensor-like domain superfamily YPTS_1284 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_1284 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_1284 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_1284 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_1285 IPR009057 Homeobox-like domain superfamily YPTS_1285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1285 IPR002197 DNA binding HTH domain, Fis-type YPTS_1285 IPR001789 Signal transduction response regulator, receiver domain YPTS_1285 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_1285 IPR025944 Sigma-54 interaction domain, conserved site YPTS_1285 IPR011006 CheY-like superfamily YPTS_1285 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_1285 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_1285 IPR003593 AAA+ ATPase domain YPTS_1286 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTS_1286 IPR013785 Aldolase-type TIM barrel YPTS_1287 IPR005119 LysR, substrate-binding YPTS_1287 IPR000847 Transcription regulator HTH, LysR YPTS_1287 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1287 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1289 IPR000412 ABC-2 transporter YPTS_1290 IPR000412 ABC-2 transporter YPTS_1291 IPR003439 ABC transporter-like YPTS_1291 IPR017871 ABC transporter, conserved site YPTS_1291 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1291 IPR003593 AAA+ ATPase domain YPTS_1292 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_1292 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPTS_1293 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPTS_1293 IPR015292 Transcription regulator YbiH, C-terminal YPTS_1293 IPR001647 DNA-binding HTH domain, TetR-type YPTS_1293 IPR009057 Homeobox-like domain superfamily YPTS_1293 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_1294 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTS_1294 IPR014014 RNA helicase, DEAD-box type, Q motif YPTS_1294 IPR011545 DEAD/DEAH box helicase domain YPTS_1294 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1294 IPR028622 ATP-dependent RNA helicase RhlE YPTS_1294 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_1294 IPR001650 Helicase, C-terminal YPTS_1295 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPTS_1295 IPR003346 Transposase, IS116/IS110/IS902 YPTS_1296 IPR038717 Tc1-like transposase, DDE domain YPTS_1296 IPR009057 Homeobox-like domain superfamily YPTS_1296 IPR025959 Winged helix-turn helix domain YPTS_1296 IPR012337 Ribonuclease H-like superfamily YPTS_1301 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPTS_1301 IPR003346 Transposase, IS116/IS110/IS902 YPTS_1302 IPR003346 Transposase, IS116/IS110/IS902 YPTS_1302 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPTS_1303 IPR035587 DUS-like, FMN-binding domain YPTS_1303 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal YPTS_1303 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTS_1303 IPR013785 Aldolase-type TIM barrel YPTS_1303 IPR032886 tRNA-dihydrouridine(16) synthase YPTS_1303 IPR001269 tRNA-dihydrouridine synthase YPTS_1305 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTS_1305 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1305 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTS_1306 IPR016166 FAD-binding domain, PCMH-type YPTS_1306 IPR012256 D-lactate dehydrogenase YPTS_1306 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_1306 IPR016164 FAD-linked oxidase-like, C-terminal YPTS_1306 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_1306 IPR006094 FAD linked oxidase, N-terminal YPTS_1306 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTS_1306 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPTS_1306 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPTS_1306 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPTS_1307 IPR023577 CYTH domain YPTS_1307 IPR033469 CYTH-like domain superfamily YPTS_1307 IPR008173 Adenylyl cyclase CyaB YPTS_1308 IPR002711 HNH endonuclease YPTS_1308 IPR003615 HNH nuclease YPTS_1310 IPR007341 Transglycosylase-associated protein YPTS_1311 IPR003439 ABC transporter-like YPTS_1311 IPR017871 ABC transporter, conserved site YPTS_1311 IPR012693 ABC transporter, phosphonate import, PhnC YPTS_1311 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1311 IPR003593 AAA+ ATPase domain YPTS_1312 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein YPTS_1313 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1313 IPR005769 ABC transporter, permease PhnE/PtxC YPTS_1313 IPR035906 MetI-like superfamily YPTS_1314 IPR005769 ABC transporter, permease PhnE/PtxC YPTS_1314 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1314 IPR035906 MetI-like superfamily YPTS_1315 IPR009921 Domain of unknown function DUF1456 YPTS_1316 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_1316 IPR003593 AAA+ ATPase domain YPTS_1316 IPR002197 DNA binding HTH domain, Fis-type YPTS_1316 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1316 IPR000014 PAS domain YPTS_1316 IPR028082 Periplasmic binding protein-like I YPTS_1316 IPR009057 Homeobox-like domain superfamily YPTS_1316 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_1316 IPR025944 Sigma-54 interaction domain, conserved site YPTS_1316 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_1317 IPR001851 ABC transporter, permease YPTS_1318 IPR001851 ABC transporter, permease YPTS_1319 IPR005876 Cobalt transport protein ATP-binding subunit YPTS_1319 IPR017871 ABC transporter, conserved site YPTS_1319 IPR003439 ABC transporter-like YPTS_1319 IPR003593 AAA+ ATPase domain YPTS_1319 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1320 IPR017871 ABC transporter, conserved site YPTS_1320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1320 IPR003439 ABC transporter-like YPTS_1320 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPTS_1320 IPR003593 AAA+ ATPase domain YPTS_1323 IPR001763 Rhodanese-like domain YPTS_1323 IPR001307 Thiosulphate sulfurtransferase, conserved site YPTS_1323 IPR036873 Rhodanese-like domain superfamily YPTS_1324 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTS_1325 IPR035906 MetI-like superfamily YPTS_1325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1326 IPR017871 ABC transporter, conserved site YPTS_1326 IPR003593 AAA+ ATPase domain YPTS_1326 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1326 IPR003439 ABC transporter-like YPTS_1327 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1327 IPR035906 MetI-like superfamily YPTS_1328 IPR002293 Amino acid/polyamine transporter I YPTS_1329 IPR011193 Ornithine/lysine/arginine decarboxylase YPTS_1329 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPTS_1329 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1329 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1329 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPTS_1329 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPTS_1329 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1329 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPTS_1331 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPTS_1331 IPR000620 EamA domain YPTS_1332 IPR001897 Porin, gammaproteobacterial YPTS_1332 IPR001702 Porin, Gram-negative type YPTS_1332 IPR013793 Porin, Gram-negative type, conserved site YPTS_1332 IPR023614 Porin domain superfamily YPTS_1332 IPR033900 Porin domain, Gram-negative type YPTS_1333 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_1333 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1333 IPR010614 DEAD2 YPTS_1333 IPR039000 ATP-dependent DNA helicase DinG YPTS_1333 IPR006554 Helicase-like, DEXD box c2 type YPTS_1333 IPR006555 ATP-dependent helicase, C-terminal YPTS_1333 IPR001650 Helicase, C-terminal YPTS_1333 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPTS_1334 IPR037060 Catalase core domain superfamily YPTS_1334 IPR040333 Catalase, clade 3 YPTS_1334 IPR018028 Catalase, mono-functional, haem-containing YPTS_1334 IPR024708 Catalase active site YPTS_1334 IPR011614 Catalase core domain YPTS_1334 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPTS_1334 IPR002226 Catalase haem-binding site YPTS_1334 IPR010582 Catalase immune-responsive domain YPTS_1334 IPR020835 Catalase superfamily YPTS_1335 IPR023614 Porin domain superfamily YPTS_1335 IPR009998 YfaZ YPTS_1335 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_1336 IPR013059 Tryptophan/tyrosine transporter YPTS_1336 IPR013061 Tryptophan/tryrosine permease, conserved site YPTS_1336 IPR018227 Amino acid/polyamine transporter 2 YPTS_1337 IPR036653 CinA-like, C-terminal YPTS_1337 IPR008135 Competence-induced protein CinA YPTS_1337 IPR001453 MoaB/Mog domain YPTS_1337 IPR036425 MoaB/Mog-like domain superfamily YPTS_1338 IPR036198 Ecotin superfamily YPTS_1338 IPR005658 Proteinase inhibitor I11, ecotin YPTS_1338 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPTS_1339 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTS_1339 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_1339 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_1339 IPR012675 Beta-grasp domain superfamily YPTS_1340 IPR000358 Ribonucleotide reductase small subunit family YPTS_1340 IPR009078 Ferritin-like superfamily YPTS_1340 IPR030475 Ribonucleotide reductase small subunit, acitve site YPTS_1340 IPR033909 Ribonucleotide reductase small subunit YPTS_1340 IPR012348 Ribonucleotide reductase-like YPTS_1341 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPTS_1341 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPTS_1341 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPTS_1341 IPR005144 ATP-cone domain YPTS_1341 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPTS_1341 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPTS_1342 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPTS_1342 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1343 IPR005743 DNA gyrase, subunit A YPTS_1343 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPTS_1343 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTS_1343 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPTS_1343 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPTS_1343 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPTS_1343 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPTS_1345 IPR001789 Signal transduction response regulator, receiver domain YPTS_1345 IPR038388 RcsC, C-terminal domain superfamily YPTS_1345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_1345 IPR030856 Sensor histidine kinase RcsC YPTS_1345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_1345 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPTS_1345 IPR005467 Histidine kinase domain YPTS_1345 IPR011006 CheY-like superfamily YPTS_1345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_1345 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_1345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_1346 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1346 IPR001789 Signal transduction response regulator, receiver domain YPTS_1346 IPR030864 Transcriptional regulatory protein RcsB YPTS_1346 IPR000792 Transcription regulator LuxR, C-terminal YPTS_1346 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1346 IPR011006 CheY-like superfamily YPTS_1347 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_1347 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily YPTS_1347 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_1347 IPR036641 HPT domain superfamily YPTS_1347 IPR030861 Phosphotransferase RcsD YPTS_1347 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_1347 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YPTS_1347 IPR005467 Histidine kinase domain YPTS_1348 IPR036259 MFS transporter superfamily YPTS_1348 IPR020846 Major facilitator superfamily domain YPTS_1348 IPR011701 Major facilitator superfamily YPTS_1350 IPR001702 Porin, Gram-negative type YPTS_1350 IPR001897 Porin, gammaproteobacterial YPTS_1350 IPR023614 Porin domain superfamily YPTS_1350 IPR013793 Porin, Gram-negative type, conserved site YPTS_1351 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1351 IPR001466 Beta-lactamase-related YPTS_1352 IPR018043 Sodium:galactoside symporter, conserved site YPTS_1352 IPR039672 Lactose permease-like YPTS_1352 IPR001927 Sodium:galactoside symporter YPTS_1352 IPR036259 MFS transporter superfamily YPTS_1353 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_1353 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPTS_1353 IPR001279 Metallo-beta-lactamase YPTS_1354 IPR000727 Target SNARE coiled-coil homology domain YPTS_1354 IPR029151 Periplasmic sensor-like domain superfamily YPTS_1354 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_1354 IPR003660 HAMP domain YPTS_1354 IPR033479 Double Cache domain 1 YPTS_1354 IPR004090 Chemotaxis methyl-accepting receptor YPTS_1355 IPR000036 Peptidase A26, omptin YPTS_1355 IPR020079 Peptidase A26, omptin, conserved site YPTS_1355 IPR020080 Outer membrane adhesin/peptidase omptin YPTS_1356 IPR010391 DNA damage-inducible protein DinI-like YPTS_1356 IPR036687 DinI-like superfamily YPTS_1357 IPR039418 LexA-like YPTS_1357 IPR001387 Cro/C1-type helix-turn-helix domain YPTS_1357 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_1357 IPR036286 LexA/Signal peptidase-like superfamily YPTS_1357 IPR015927 Peptidase S24/S26A/S26B/S26C YPTS_1359 IPR010534 Bacteriophage 933W, GpQ YPTS_1360 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily YPTS_1360 IPR010737 Four-carbon acid sugar kinase, N-terminal domain YPTS_1360 IPR031475 Nucleotide-binding C-terminal domain YPTS_1360 IPR042213 Nucleotide-binding, C-terminal domain superfamily YPTS_1361 IPR001303 Class II aldolase/adducin N-terminal YPTS_1361 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_1362 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_1362 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1362 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1362 IPR014036 DeoR C-terminal sensor domain YPTS_1362 IPR001034 DeoR-type HTH domain YPTS_1362 IPR037171 NagB/RpiA transferase-like YPTS_1363 IPR013022 Xylose isomerase-like, TIM barrel domain YPTS_1363 IPR036237 Xylose isomerase-like superfamily YPTS_1363 IPR026040 Hydroxypyruvate isomerase-like YPTS_1367 IPR020287 Tail sheath protein, C-terminal domain YPTS_1367 IPR007067 Tail sheath protein YPTS_1367 IPR035089 Tail sheath protein, subtilisin-like domain YPTS_1375 IPR006949 Baseplate protein J-like YPTS_1377 IPR037053 Phage tail collar domain superfamily YPTS_1377 IPR011083 Phage tail collar domain YPTS_1378 IPR001347 Sugar isomerase (SIS) YPTS_1378 IPR035472 RpiR-like, SIS domain YPTS_1378 IPR000281 Helix-turn-helix protein RpiR YPTS_1378 IPR009057 Homeobox-like domain superfamily YPTS_1378 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1380 IPR018120 Glycoside hydrolase family 1, active site YPTS_1380 IPR001360 Glycoside hydrolase family 1 YPTS_1380 IPR017853 Glycoside hydrolase superfamily YPTS_1380 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPTS_1385 IPR008514 Type VI secretion system effector, Hcp YPTS_1385 IPR003615 HNH nuclease YPTS_1385 IPR036624 Hcp1-like superfamily YPTS_1388 IPR024588 Inner membrane protein YejM, N-terminal YPTS_1388 IPR000917 Sulfatase, N-terminal YPTS_1388 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_1388 IPR012159 Inner membrane protein YejM YPTS_1389 IPR023202 YejL-like superfamily YPTS_1389 IPR009857 Uncharacterised protein family UPF0352 YPTS_1390 IPR007358 Nucleoid-associated protein NdpA YPTS_1391 IPR020055 Ribosomal protein L25, short-form YPTS_1391 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPTS_1391 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPTS_1391 IPR029751 Ribosomal protein L25 YPTS_1392 IPR006935 Helicase/UvrB, N-terminal YPTS_1392 IPR001650 Helicase, C-terminal YPTS_1392 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1392 IPR011332 Zinc-binding ribosomal protein YPTS_1392 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_1393 IPR036986 RNA-binding S4 domain superfamily YPTS_1393 IPR002942 RNA-binding S4 domain YPTS_1393 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTS_1393 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTS_1393 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_1393 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_1393 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTS_1394 IPR004734 Multidrug resistance protein YPTS_1394 IPR036259 MFS transporter superfamily YPTS_1394 IPR020846 Major facilitator superfamily domain YPTS_1394 IPR011701 Major facilitator superfamily YPTS_1394 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPTS_1395 IPR020489 Uncharacterised protein family YejG YPTS_1396 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_1396 IPR017871 ABC transporter, conserved site YPTS_1396 IPR003439 ABC transporter-like YPTS_1396 IPR003593 AAA+ ATPase domain YPTS_1396 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1397 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_1397 IPR035906 MetI-like superfamily YPTS_1397 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1398 IPR035906 MetI-like superfamily YPTS_1398 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1399 IPR000914 Solute-binding protein family 5 domain YPTS_1399 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_1399 IPR039424 Solute-binding protein family 5 YPTS_1400 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPTS_1400 IPR001633 EAL domain YPTS_1400 IPR035919 EAL domain superfamily YPTS_1401 IPR038765 Papain-like cysteine peptidase superfamily YPTS_1401 IPR000064 Endopeptidase, NLPC/P60 domain YPTS_1402 IPR032908 Lipid A 1-diphosphate synthase YPTS_1402 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTS_1402 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTS_1403 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTS_1403 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1403 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPTS_1405 IPR011711 GntR, C-terminal YPTS_1405 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTS_1405 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1405 IPR000524 Transcription regulator HTH, GntR YPTS_1405 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1406 IPR013118 Mannitol dehydrogenase, C-terminal YPTS_1406 IPR000669 Mannitol dehydrogenase YPTS_1406 IPR036291 NAD(P)-binding domain superfamily YPTS_1406 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_1406 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_1406 IPR013131 Mannitol dehydrogenase, N-terminal YPTS_1406 IPR023027 Mannitol dehydrogenase, conserved site YPTS_1407 IPR036237 Xylose isomerase-like superfamily YPTS_1407 IPR004628 Mannonate dehydratase YPTS_1408 IPR014722 Ribosomal protein L2, domain 2 YPTS_1408 IPR015365 Elongation factor P, C-terminal YPTS_1408 IPR012340 Nucleic acid-binding, OB-fold YPTS_1408 IPR020599 Translation elongation factor P/YeiP YPTS_1408 IPR013185 Translation elongation factor, KOW-like YPTS_1408 IPR011897 Translation elongation factor P-like, YeiP YPTS_1408 IPR001059 Translation elongation factor P/YeiP, central YPTS_1408 IPR013852 Translation elongation factor P/YeiP, conserved site YPTS_1408 IPR008991 Translation protein SH3-like domain superfamily YPTS_1409 IPR013059 Tryptophan/tyrosine transporter YPTS_1409 IPR018227 Amino acid/polyamine transporter 2 YPTS_1410 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTS_1411 IPR036291 NAD(P)-binding domain superfamily YPTS_1411 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1411 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1412 IPR006236 D-3-phosphoglycerate dehydrogenase YPTS_1412 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_1412 IPR029009 Allosteric substrate binding domain superfamily YPTS_1412 IPR002912 ACT domain YPTS_1412 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTS_1412 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTS_1412 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_1412 IPR036291 NAD(P)-binding domain superfamily YPTS_1415 IPR010102 Succinate semialdehyde dehydrogenase YPTS_1415 IPR015590 Aldehyde dehydrogenase domain YPTS_1415 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_1415 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_1415 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_1415 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_1415 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1416 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_1416 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_1416 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTS_1416 IPR000577 Carbohydrate kinase, FGGY YPTS_1416 IPR006000 Xylulokinase YPTS_1421 IPR003593 AAA+ ATPase domain YPTS_1421 IPR003439 ABC transporter-like YPTS_1421 IPR017871 ABC transporter, conserved site YPTS_1421 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1421 IPR015861 ABC transporter, ribose import, RbsA YPTS_1422 IPR001851 ABC transporter, permease YPTS_1423 IPR000086 NUDIX hydrolase domain YPTS_1423 IPR020084 NUDIX hydrolase, conserved site YPTS_1423 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_1423 IPR020476 NUDIX hydrolase YPTS_1424 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTS_1424 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTS_1424 IPR002178 PTS EIIA type-2 domain YPTS_1424 IPR016152 Phosphotransferase/anion transporter YPTS_1424 IPR035895 HPr-like superfamily YPTS_1424 IPR000032 Phosphocarrier protein HPr-like YPTS_1425 IPR011611 Carbohydrate kinase PfkB YPTS_1425 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_1425 IPR022463 Fructose 1-phosphate kinase YPTS_1425 IPR017583 Tagatose/fructose phosphokinase YPTS_1425 IPR029056 Ribokinase-like YPTS_1426 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTS_1426 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTS_1426 IPR006327 Phosphotransferase system, fructose IIC component YPTS_1426 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPTS_1426 IPR013014 Phosphotransferase system, EIIC component, type 2 YPTS_1426 IPR003352 Phosphotransferase system, EIIC YPTS_1426 IPR036095 PTS system IIB component-like superfamily YPTS_1427 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1427 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_1427 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1428 IPR035182 Protein of unknown function PsaF YPTS_1430 IPR013783 Immunoglobulin-like fold YPTS_1430 IPR008962 PapD-like superfamily YPTS_1430 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_1430 IPR018046 Pili assembly chaperone, conserved site YPTS_1430 IPR016148 Pili assembly chaperone, C-terminal YPTS_1430 IPR001829 Pili assembly chaperone, bacterial YPTS_1430 IPR016147 Pili assembly chaperone, N-terminal YPTS_1431 IPR000015 Outer membrane usher protein YPTS_1431 IPR037224 PapC, N-terminal domain superfamily YPTS_1431 IPR018030 Fimbrial membrane usher, conserved site YPTS_1431 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_1431 IPR025885 PapC, N-terminal domain YPTS_1431 IPR025949 PapC-like, C-terminal domain YPTS_1432 IPR001719 AP endonuclease 2 YPTS_1432 IPR036237 Xylose isomerase-like superfamily YPTS_1432 IPR013022 Xylose isomerase-like, TIM barrel domain YPTS_1432 IPR018246 AP endonuclease 2, zinc binding site YPTS_1433 IPR004630 Uncharacterised protein family UPF0324, bacteria YPTS_1433 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPTS_1434 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1434 IPR000847 Transcription regulator HTH, LysR YPTS_1434 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1434 IPR005119 LysR, substrate-binding YPTS_1436 IPR004840 Amino acid permease, conserved site YPTS_1436 IPR004841 Amino acid permease/ SLC12A domain YPTS_1438 IPR037294 ABC transporter, BtuC-like YPTS_1438 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_1439 IPR003439 ABC transporter-like YPTS_1439 IPR003593 AAA+ ATPase domain YPTS_1439 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1439 IPR015863 ABC transporter, hemin import, HmuV YPTS_1440 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_1440 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_1440 IPR010916 TonB box, conserved site YPTS_1440 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_1440 IPR012910 TonB-dependent receptor, plug domain YPTS_1440 IPR039426 Vitamin B12 transporter BtuB-like YPTS_1440 IPR010917 TonB-dependent receptor, conserved site YPTS_1441 IPR036249 Thioredoxin-like superfamily YPTS_1441 IPR004046 Glutathione S-transferase, C-terminal YPTS_1441 IPR004045 Glutathione S-transferase, N-terminal YPTS_1441 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTS_1441 IPR010987 Glutathione S-transferase, C-terminal-like YPTS_1442 IPR023214 HAD superfamily YPTS_1442 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like YPTS_1442 IPR036412 HAD-like superfamily YPTS_1445 IPR004872 Lipoprotein NlpA family YPTS_1446 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1446 IPR018449 NIL domain YPTS_1446 IPR003593 AAA+ ATPase domain YPTS_1446 IPR017871 ABC transporter, conserved site YPTS_1446 IPR026253 Methionine import ATP-binding protein MetN YPTS_1446 IPR003439 ABC transporter-like YPTS_1446 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPTS_1446 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPTS_1447 IPR035906 MetI-like superfamily YPTS_1447 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1448 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPTS_1448 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPTS_1448 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPTS_1448 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPTS_1448 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1448 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPTS_1449 IPR004694 Hydroxy amino acid transporter YPTS_1450 IPR001034 DeoR-type HTH domain YPTS_1450 IPR037171 NagB/RpiA transferase-like YPTS_1450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_1450 IPR014036 DeoR C-terminal sensor domain YPTS_1451 IPR013785 Aldolase-type TIM barrel YPTS_1451 IPR002915 DeoC/FbaB/ lacD aldolase YPTS_1451 IPR028581 Deoxyribose-phosphate aldolase type I YPTS_1451 IPR011343 Deoxyribose-phosphate aldolase YPTS_1452 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTS_1452 IPR033879 Undecaprenyl-diphosphatase YPTS_1452 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTS_1454 IPR006037 Regulator of K+ conductance, C-terminal YPTS_1454 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTS_1454 IPR023017 Transport protein YbjL, putative YPTS_1454 IPR006512 YidE/YbjL duplication YPTS_1455 IPR036249 Thioredoxin-like superfamily YPTS_1455 IPR011902 Glutaredoxin, GrxA YPTS_1455 IPR014025 Glutaredoxin subgroup YPTS_1455 IPR002109 Glutaredoxin YPTS_1455 IPR011767 Glutaredoxin active site YPTS_1456 IPR010815 Protein of unknown function DUF1418 YPTS_1457 IPR019660 Putative sensory transduction regulator YbjN YPTS_1458 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPTS_1458 IPR006059 Bacterial extracellular solute-binding protein YPTS_1459 IPR013611 Transport-associated OB, type 2 YPTS_1459 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTS_1459 IPR003593 AAA+ ATPase domain YPTS_1459 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_1459 IPR017871 ABC transporter, conserved site YPTS_1459 IPR003439 ABC transporter-like YPTS_1459 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1460 IPR035906 MetI-like superfamily YPTS_1461 IPR035906 MetI-like superfamily YPTS_1461 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1462 IPR019703 Protein of unknown function DUF2593 YPTS_1463 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPTS_1463 IPR030390 RNA methyltransferase TrmA, active site YPTS_1463 IPR030391 RNA methyltransferase TrmA, conserved site YPTS_1463 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1463 IPR010280 (Uracil-5)-methyltransferase family YPTS_1464 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_1464 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTS_1464 IPR001320 Ionotropic glutamate receptor YPTS_1464 IPR018313 Solute-binding protein family 3, conserved site YPTS_1469 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_1469 IPR037294 ABC transporter, BtuC-like YPTS_1470 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1470 IPR017871 ABC transporter, conserved site YPTS_1470 IPR003439 ABC transporter-like YPTS_1470 IPR003593 AAA+ ATPase domain YPTS_1471 IPR036291 NAD(P)-binding domain superfamily YPTS_1471 IPR004298 Nicotianamine synthase YPTS_1472 IPR016935 Opine metallophore dehydrogenase YPTS_1472 IPR036291 NAD(P)-binding domain superfamily YPTS_1473 IPR000620 EamA domain YPTS_1474 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_1474 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1474 IPR035906 MetI-like superfamily YPTS_1475 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_1475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1475 IPR035906 MetI-like superfamily YPTS_1476 IPR001320 Ionotropic glutamate receptor YPTS_1476 IPR018313 Solute-binding protein family 3, conserved site YPTS_1476 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTS_1476 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_1477 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTS_1477 IPR017871 ABC transporter, conserved site YPTS_1477 IPR003439 ABC transporter-like YPTS_1477 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1477 IPR003593 AAA+ ATPase domain YPTS_1478 IPR008240 Chorismate mutase, periplasmic YPTS_1478 IPR036263 Chorismate mutase type II superfamily YPTS_1478 IPR002701 Chorismate mutase II, prokaryotic-type YPTS_1479 IPR024289 Domain of unknown function DUF3828 YPTS_1480 IPR001509 NAD-dependent epimerase/dehydratase YPTS_1480 IPR036291 NAD(P)-binding domain superfamily YPTS_1481 IPR021295 Protein of unknown function DUF2867 YPTS_1481 IPR016040 NAD(P)-binding domain YPTS_1481 IPR036291 NAD(P)-binding domain superfamily YPTS_1482 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1482 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPTS_1482 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1482 IPR023603 Threonine aldolase YPTS_1482 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1483 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_1483 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_1483 IPR000399 TPP-binding enzyme, conserved site YPTS_1483 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTS_1483 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_1483 IPR029061 Thiamin diphosphate-binding fold YPTS_1484 IPR012675 Beta-grasp domain superfamily YPTS_1484 IPR000951 Phthalate dioxygenase reductase YPTS_1484 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_1484 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_1484 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_1484 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_1484 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_1484 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_1484 IPR017938 Riboflavin synthase-like beta-barrel YPTS_1485 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPTS_1485 IPR016100 Prismane, alpha-bundle YPTS_1485 IPR010048 Hydroxylamine reductase YPTS_1485 IPR016099 Prismane-like, alpha/beta-sandwich YPTS_1485 IPR011254 Prismane-like superfamily YPTS_1486 IPR005642 Lysine exporter LysO YPTS_1487 IPR022602 Protein of unknown function DUF2813 YPTS_1487 IPR034139 OLD protein-like, TOPRIM domain YPTS_1487 IPR006171 TOPRIM domain YPTS_1487 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1489 IPR007488 Protein of unknown function DUF535 YPTS_1490 IPR030190 Macrolide export protein MacA YPTS_1490 IPR006143 RND efflux pump, membrane fusion protein YPTS_1490 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_1491 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTS_1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1491 IPR003439 ABC transporter-like YPTS_1491 IPR003838 ABC transporter permease protein domain YPTS_1491 IPR003593 AAA+ ATPase domain YPTS_1491 IPR025857 MacB-like periplasmic core domain YPTS_1491 IPR017871 ABC transporter, conserved site YPTS_1492 IPR012340 Nucleic acid-binding, OB-fold YPTS_1492 IPR011129 Cold shock domain YPTS_1492 IPR012156 Cold shock, CspA YPTS_1492 IPR019844 Cold-shock (CSD) domain YPTS_1492 IPR002059 Cold-shock protein, DNA-binding YPTS_1492 IPR012751 CspD, cold shock YPTS_1493 IPR003769 Adaptor protein ClpS, core YPTS_1493 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPTS_1493 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPTS_1494 IPR003959 ATPase, AAA-type, core YPTS_1494 IPR003593 AAA+ ATPase domain YPTS_1494 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1494 IPR036628 Clp, N-terminal domain superfamily YPTS_1494 IPR019489 Clp ATPase, C-terminal YPTS_1494 IPR041546 ClpA/ClpB, AAA lid domain YPTS_1494 IPR018368 ClpA/B, conserved site 1 YPTS_1494 IPR001270 ClpA/B family YPTS_1494 IPR004176 Clp, N-terminal YPTS_1494 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPTS_1494 IPR028299 ClpA/B, conserved site 2 YPTS_1495 IPR012340 Nucleic acid-binding, OB-fold YPTS_1495 IPR004368 Translation initiation factor IF-1 YPTS_1495 IPR006196 RNA-binding domain, S1, IF1 type YPTS_1495 IPR022967 RNA-binding domain, S1 YPTS_1496 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal YPTS_1496 IPR016181 Acyl-CoA N-acyltransferase YPTS_1496 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPTS_1497 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPTS_1497 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1497 IPR017871 ABC transporter, conserved site YPTS_1497 IPR003593 AAA+ ATPase domain YPTS_1497 IPR003439 ABC transporter-like YPTS_1497 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1497 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1498 IPR003593 AAA+ ATPase domain YPTS_1498 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1498 IPR003439 ABC transporter-like YPTS_1498 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1498 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1498 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPTS_1498 IPR039421 Type I protein exporter YPTS_1498 IPR017871 ABC transporter, conserved site YPTS_1499 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_1499 IPR023753 FAD/NAD(P)-binding domain YPTS_1499 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPTS_1499 IPR005982 Thioredoxin reductase YPTS_1500 IPR011991 ArsR-like helix-turn-helix domain YPTS_1500 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1500 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1500 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTS_1500 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTS_1500 IPR019888 Transcription regulator AsnC-type YPTS_1500 IPR011008 Dimeric alpha-beta barrel YPTS_1500 IPR000485 AsnC-type HTH domain YPTS_1501 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1501 IPR002543 FtsK domain YPTS_1501 IPR025199 DNA translocase FtsK, 4TM region YPTS_1501 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1501 IPR041027 FtsK alpha domain YPTS_1501 IPR018541 FtsK gamma domain YPTS_1501 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1502 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPTS_1502 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPTS_1502 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTS_1503 IPR003959 ATPase, AAA-type, core YPTS_1503 IPR032423 AAA C-terminal domain YPTS_1503 IPR003593 AAA+ ATPase domain YPTS_1503 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1503 IPR021886 MgsA AAA+ ATPase C-terminal YPTS_1503 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTS_1505 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_1505 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPTS_1505 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily YPTS_1505 IPR002317 Serine-tRNA ligase, type1 YPTS_1505 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTS_1505 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTS_1505 IPR033729 Serine-tRNA ligase catalytic core domain YPTS_1506 IPR036259 MFS transporter superfamily YPTS_1506 IPR020846 Major facilitator superfamily domain YPTS_1506 IPR011701 Major facilitator superfamily YPTS_1506 IPR023745 MSF-type transporter, YcaD YPTS_1507 IPR001989 Radical-activating enzyme, conserved site YPTS_1507 IPR012839 Organic radical enzyme activase YPTS_1507 IPR034465 Pyruvate formate-lyase activase YPTS_1507 IPR034457 Organic radical-activating enzymes YPTS_1507 IPR012838 Pyruvate formate-lyase 1 activating enzyme YPTS_1507 IPR013785 Aldolase-type TIM barrel YPTS_1507 IPR007197 Radical SAM YPTS_1509 IPR001150 Glycine radical domain YPTS_1509 IPR005949 Formate acetyltransferase YPTS_1509 IPR004184 Pyruvate formate lyase domain YPTS_1509 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTS_1510 IPR000292 Formate/nitrite transporter YPTS_1510 IPR023271 Aquaporin-like YPTS_1510 IPR024002 Formate/nitrite transporter, conserved site YPTS_1510 IPR023999 Formate transporter FocA, putative YPTS_1511 IPR041080 YcaO cyclodehydratase, C-terminal YPTS_1511 IPR003776 YcaO-like domain YPTS_1512 IPR006034 Asparaginase/glutaminase-like YPTS_1512 IPR004550 L-asparaginase, type II YPTS_1512 IPR027474 L-asparaginase, N-terminal YPTS_1512 IPR036152 Asparaginase/glutaminase-like superfamily YPTS_1512 IPR037152 L-asparaginase, N-terminal domain superfamily YPTS_1512 IPR027473 L-asparaginase, C-terminal YPTS_1512 IPR040919 Asparaginase/glutaminase, C-terminal YPTS_1512 IPR027475 Asparaginase/glutaminase, active site 2 YPTS_1512 IPR020827 Asparaginase/glutaminase, active site 1 YPTS_1515 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1515 IPR022278 Phosphoserine aminotransferase YPTS_1515 IPR000192 Aminotransferase class V domain YPTS_1515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1515 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_1515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1516 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPTS_1516 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPTS_1516 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPTS_1516 IPR001986 Enolpyruvate transferase domain YPTS_1516 IPR036968 Enolpyruvate transferase domain superfamily YPTS_1517 IPR003136 Cytidylate kinase YPTS_1517 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1517 IPR011994 Cytidylate kinase domain YPTS_1518 IPR012340 Nucleic acid-binding, OB-fold YPTS_1518 IPR022967 RNA-binding domain, S1 YPTS_1518 IPR000110 Ribosomal protein S1 YPTS_1518 IPR003029 S1 domain YPTS_1519 IPR005685 Integration host factor, beta subunit YPTS_1519 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTS_1519 IPR000119 Histone-like DNA-binding protein YPTS_1519 IPR020816 Histone-like DNA-binding protein, conserved site YPTS_1521 IPR004797 Competence protein ComEC/Rec2 YPTS_1521 IPR035681 ComA-like, MBL domain YPTS_1521 IPR004477 ComEC/Rec2-related protein YPTS_1521 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_1521 IPR001279 Metallo-beta-lactamase YPTS_1522 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1522 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1522 IPR003593 AAA+ ATPase domain YPTS_1522 IPR017871 ABC transporter, conserved site YPTS_1522 IPR011917 ABC transporter, lipid A export, MsbA YPTS_1522 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1522 IPR003439 ABC transporter-like YPTS_1522 IPR039421 Type I protein exporter YPTS_1523 IPR003758 Tetraacyldisaccharide 4'-kinase YPTS_1523 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1524 IPR009770 Domain of unknown function DUF1338 YPTS_1525 IPR012340 Nucleic acid-binding, OB-fold YPTS_1525 IPR002059 Cold-shock protein, DNA-binding YPTS_1525 IPR019844 Cold-shock (CSD) domain YPTS_1525 IPR012156 Cold shock, CspA YPTS_1525 IPR011129 Cold shock domain YPTS_1526 IPR005651 Trm112-like YPTS_1527 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPTS_1527 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_1527 IPR003329 Acylneuraminate cytidylyltransferase YPTS_1528 IPR002575 Aminoglycoside phosphotransferase YPTS_1528 IPR011009 Protein kinase-like domain superfamily YPTS_1529 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase YPTS_1529 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1530 IPR005582 Chromosome partition protein MukF YPTS_1530 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1530 IPR036141 MukF, middle domain superfamily YPTS_1530 IPR010916 TonB box, conserved site YPTS_1530 IPR033439 Chromosome partition protein MukF, winged-helix domain YPTS_1530 IPR033440 Chromosome partition protein MukF, middle domain YPTS_1530 IPR038198 MukF, C-terminal domain superfamily YPTS_1530 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1530 IPR033441 Chromosome partition protein MukF, C-terminal domain YPTS_1531 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPTS_1531 IPR042038 MukE, N-terminal domain YPTS_1531 IPR042037 MukE, C-terminal domain YPTS_1532 IPR012090 Chromosome partition protein MukB YPTS_1532 IPR007406 MukB, N-terminal domain YPTS_1532 IPR032520 MukB, hinge domain YPTS_1532 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1533 IPR005490 L,D-transpeptidase catalytic domain YPTS_1533 IPR002477 Peptidoglycan binding-like YPTS_1533 IPR036365 PGBD-like superfamily YPTS_1533 IPR038063 L,D-transpeptidase catalytic domain-like YPTS_1534 IPR010275 Protein of unknown function DUF882 YPTS_1534 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTS_1534 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_1535 IPR001279 Metallo-beta-lactamase YPTS_1535 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_1536 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPTS_1536 IPR000796 Aspartate/other aminotransferase YPTS_1536 IPR004839 Aminotransferase, class I/classII YPTS_1536 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1536 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1536 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1537 IPR013793 Porin, Gram-negative type, conserved site YPTS_1537 IPR033900 Porin domain, Gram-negative type YPTS_1537 IPR023614 Porin domain superfamily YPTS_1537 IPR001702 Porin, Gram-negative type YPTS_1537 IPR001897 Porin, gammaproteobacterial YPTS_1538 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_1538 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTS_1538 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTS_1538 IPR012340 Nucleic acid-binding, OB-fold YPTS_1538 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPTS_1538 IPR004522 Asparagine-tRNA ligase YPTS_1539 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase YPTS_1539 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain YPTS_1539 IPR006406 Nicotinate phosphoribosyltransferase YPTS_1539 IPR007229 Nicotinate phosphoribosyltransferase family YPTS_1539 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPTS_1541 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YPTS_1541 IPR014782 Peptidase M1, membrane alanine aminopeptidase YPTS_1541 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YPTS_1541 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YPTS_1541 IPR012779 Peptidase M1, alanyl aminopeptidase YPTS_1541 IPR042097 Aminopeptidase N-like , N-terminal YPTS_1541 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPTS_1541 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPTS_1541 IPR027268 Peptidase M4/M1, CTD superfamily YPTS_1542 IPR001207 Transposase, mutator type YPTS_1543 IPR005719 Dihydroorotate dehydrogenase, class 2 YPTS_1543 IPR005720 Dihydroorotate dehydrogenase domain YPTS_1543 IPR013785 Aldolase-type TIM barrel YPTS_1543 IPR001295 Dihydroorotate dehydrogenase, conserved site YPTS_1543 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPTS_1544 IPR009809 Cell division protein ZapC YPTS_1545 IPR005303 MOSC, N-terminal beta barrel YPTS_1545 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPTS_1545 IPR012675 Beta-grasp domain superfamily YPTS_1545 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTS_1545 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTS_1545 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_1545 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_1546 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1546 IPR004114 THUMP domain YPTS_1546 IPR000241 Putative RNA methylase domain YPTS_1546 IPR019614 S-adenosylmethionine-dependent methyltransferase YPTS_1546 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_1546 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPTS_1547 IPR032781 ABC-transporter extension domain YPTS_1547 IPR032524 ABC transporter Uup, C-terminal YPTS_1547 IPR003593 AAA+ ATPase domain YPTS_1547 IPR017871 ABC transporter, conserved site YPTS_1547 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPTS_1547 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1547 IPR003439 ABC transporter-like YPTS_1548 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPTS_1548 IPR007498 Intermembrane transport protein PqiA-like YPTS_1549 IPR003399 Mce/MlaD YPTS_1550 IPR005586 ABC-type transport auxiliary lipoprotein component YPTS_1551 IPR023200 Ribosome modulation factor domain superfamily YPTS_1551 IPR007040 Ribosome modulation factor YPTS_1553 IPR002686 Transposase IS200-like YPTS_1553 IPR036515 Transposase IS200-like superfamily YPTS_1554 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_1554 IPR018201 Beta-ketoacyl synthase, active site YPTS_1554 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPTS_1554 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_1554 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_1554 IPR000794 Beta-ketoacyl synthase YPTS_1554 IPR016039 Thiolase-like YPTS_1556 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPTS_1556 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTS_1556 IPR029069 HotDog domain superfamily YPTS_1557 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1557 IPR041699 Lon protease, AAA domain YPTS_1557 IPR008269 Peptidase S16, Lon proteolytic domain YPTS_1557 IPR027065 Lon protease YPTS_1557 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_1558 IPR038339 MatP, N-terminal domain superfamily YPTS_1558 IPR035087 MatP, N-terminal YPTS_1558 IPR013321 Arc-type ribbon-helix-helix YPTS_1558 IPR035375 MatP, C-terminal ribbon-helix-helix domain YPTS_1558 IPR009390 Macrodomain Ter protein, MatP YPTS_1559 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_1559 IPR006664 Outer membrane protein, bacterial YPTS_1559 IPR036737 OmpA-like domain superfamily YPTS_1559 IPR006665 OmpA-like domain YPTS_1559 IPR000498 Outer membrane protein OmpA-like, transmembrane domain YPTS_1559 IPR002368 Outer membrane protein, OmpA YPTS_1559 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_1560 IPR004596 Cell division suppressor protein, SulA YPTS_1560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1561 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPTS_1561 IPR007076 TfoX, N-terminal YPTS_1561 IPR007077 TfoX, C-terminal YPTS_1562 IPR010019 Integral membrane protein, YccS YPTS_1562 IPR010020 Integral membrane protein, YccS/YhfK YPTS_1562 IPR032692 Integral membrane protein YccS, N-terminal YPTS_1563 IPR005185 Inner membrane component domain YPTS_1563 IPR031308 Uncharacterised conserved protein UCP028777 YPTS_1564 IPR014017 UvrD-like DNA helicase, C-terminal YPTS_1564 IPR022161 DNA helicase IV, N-terminal domain YPTS_1564 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1564 IPR034739 UvrD/AddA helicase, N-terminal YPTS_1564 IPR000212 DNA helicase, UvrD/REP type YPTS_1564 IPR014016 UvrD-like helicase, ATP-binding domain YPTS_1565 IPR018148 Methylglyoxal synthase, active site YPTS_1565 IPR036914 Methylglyoxal synthase-like domain superfamily YPTS_1565 IPR004363 Methylglyoxal synthase YPTS_1565 IPR011607 Methylglyoxal synthase-like domain YPTS_1566 IPR018635 Uncharacterised protein family UPF0319 YPTS_1567 IPR036291 NAD(P)-binding domain superfamily YPTS_1567 IPR003781 CoA-binding YPTS_1568 IPR022866 Heat shock protein HspQ YPTS_1568 IPR011722 Hemimethylated DNA-binding domain YPTS_1568 IPR036623 Hemimethylated DNA-binding domain superfamily YPTS_1569 IPR019614 S-adenosylmethionine-dependent methyltransferase YPTS_1569 IPR041532 RlmI, PUA-like domain YPTS_1569 IPR023542 rRNA large subunit methyltransferase I YPTS_1569 IPR015947 PUA-like superfamily YPTS_1569 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1569 IPR036974 PUA domain superfamily YPTS_1569 IPR002478 PUA domain YPTS_1570 IPR020456 Acylphosphatase YPTS_1570 IPR001792 Acylphosphatase-like domain YPTS_1570 IPR036046 Acylphosphatase-like domain superfamily YPTS_1570 IPR028627 Acylphosphatase, bacteria YPTS_1570 IPR017968 Acylphosphatase, conserved site YPTS_1571 IPR042072 DsrC-like protein, C-terminal domain YPTS_1571 IPR025526 DsrC-like domain superfamily YPTS_1571 IPR007453 Sulphur transfer protein DsrC/TusE YPTS_1573 IPR032874 DDE domain YPTS_1573 IPR012337 Ribonuclease H-like superfamily YPTS_1573 IPR001584 Integrase, catalytic core YPTS_1573 IPR036397 Ribonuclease H superfamily YPTS_1576 IPR012951 Berberine/berberine-like YPTS_1576 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_1576 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPTS_1576 IPR006094 FAD linked oxidase, N-terminal YPTS_1576 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_1576 IPR016166 FAD-binding domain, PCMH-type YPTS_1576 IPR016167 FAD-binding, type PCMH, subdomain 1 YPTS_1576 IPR016164 FAD-linked oxidase-like, C-terminal YPTS_1577 IPR011294 3-hydroxybutyrate dehydrogenase YPTS_1577 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1577 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1577 IPR036291 NAD(P)-binding domain superfamily YPTS_1579 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTS_1579 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPTS_1579 IPR029069 HotDog domain superfamily YPTS_1580 IPR000794 Beta-ketoacyl synthase YPTS_1580 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_1580 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_1580 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_1580 IPR016039 Thiolase-like YPTS_1580 IPR018201 Beta-ketoacyl synthase, active site YPTS_1581 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTS_1581 IPR036291 NAD(P)-binding domain superfamily YPTS_1581 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1581 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1582 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPTS_1582 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPTS_1582 IPR016039 Thiolase-like YPTS_1584 IPR001753 Enoyl-CoA hydratase/isomerase YPTS_1584 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTS_1584 IPR029045 ClpP/crotonase-like domain superfamily YPTS_1585 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1585 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1585 IPR036291 NAD(P)-binding domain superfamily YPTS_1587 IPR009081 Phosphopantetheine binding ACP domain YPTS_1587 IPR036736 ACP-like superfamily YPTS_1588 IPR014043 Acyl transferase YPTS_1588 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPTS_1588 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPTS_1588 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTS_1588 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTS_1588 IPR001227 Acyl transferase domain superfamily YPTS_1594 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_1594 IPR006665 OmpA-like domain YPTS_1594 IPR006664 Outer membrane protein, bacterial YPTS_1594 IPR008722 Outer membrane porin F, N-terminal YPTS_1594 IPR028974 TSP type-3 repeat YPTS_1594 IPR036737 OmpA-like domain superfamily YPTS_1594 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_1596 IPR001270 ClpA/B family YPTS_1596 IPR017729 Type VI secretion system, ATPase ClpV1 YPTS_1596 IPR019489 Clp ATPase, C-terminal YPTS_1596 IPR018368 ClpA/B, conserved site 1 YPTS_1596 IPR041546 ClpA/ClpB, AAA lid domain YPTS_1596 IPR003959 ATPase, AAA-type, core YPTS_1596 IPR003593 AAA+ ATPase domain YPTS_1596 IPR036628 Clp, N-terminal domain superfamily YPTS_1596 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1596 IPR004176 Clp, N-terminal YPTS_1616 IPR003593 AAA+ ATPase domain YPTS_1616 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1616 IPR003439 ABC transporter-like YPTS_1616 IPR032781 ABC-transporter extension domain YPTS_1618 IPR012730 Molybdopterin synthase sulfurylase MoeB YPTS_1618 IPR000594 THIF-type NAD/FAD binding fold YPTS_1618 IPR035985 Ubiquitin-activating enzyme YPTS_1619 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPTS_1619 IPR038987 Molybdopterin biosynthesis protein MoeA-like YPTS_1619 IPR001453 MoaB/Mog domain YPTS_1619 IPR036425 MoaB/Mog-like domain superfamily YPTS_1619 IPR036688 MoeA, C-terminal, domain IV superfamily YPTS_1619 IPR005110 MoeA, N-terminal and linker domain YPTS_1619 IPR036135 MoeA, N-terminal and linker domain superfamily YPTS_1619 IPR005111 MoeA, C-terminal, domain IV YPTS_1622 IPR017871 ABC transporter, conserved site YPTS_1622 IPR003439 ABC transporter-like YPTS_1622 IPR003593 AAA+ ATPase domain YPTS_1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1623 IPR006143 RND efflux pump, membrane fusion protein YPTS_1623 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTS_1623 IPR022824 Multidrug resistance protein MdtA YPTS_1626 IPR014186 S-formylglutathione hydrolase YPTS_1626 IPR000801 Putative esterase YPTS_1626 IPR029058 Alpha/Beta hydrolase fold YPTS_1627 IPR014183 Alcohol dehydrogenase class III YPTS_1627 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPTS_1627 IPR036291 NAD(P)-binding domain superfamily YPTS_1627 IPR011032 GroES-like superfamily YPTS_1627 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_1627 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_1627 IPR020843 Polyketide synthase, enoylreductase domain YPTS_1628 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1628 IPR005119 LysR, substrate-binding YPTS_1628 IPR000847 Transcription regulator HTH, LysR YPTS_1628 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1629 IPR036259 MFS transporter superfamily YPTS_1629 IPR010645 Uncharacterised MFS-type transporter YbfB YPTS_1630 IPR001474 GTP cyclohydrolase I YPTS_1630 IPR018234 GTP cyclohydrolase I, conserved site YPTS_1630 IPR020602 GTP cyclohydrolase I domain YPTS_1631 IPR007349 Domain of unknown function DUF418 YPTS_1632 IPR025997 Periplasmic binding protein YPTS_1632 IPR028082 Periplasmic binding protein-like I YPTS_1633 IPR015862 ABC transporter, galactose import, MglA YPTS_1633 IPR017871 ABC transporter, conserved site YPTS_1633 IPR003439 ABC transporter-like YPTS_1633 IPR003593 AAA+ ATPase domain YPTS_1633 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1634 IPR001851 ABC transporter, permease YPTS_1634 IPR030158 Galactoside transport system permease protein MglC YPTS_1635 IPR003848 Domain of unknown function DUF218 YPTS_1635 IPR023604 Uncharacterised protein family SanA YPTS_1636 IPR001891 Malic oxidoreductase YPTS_1636 IPR012302 Malic enzyme, NAD-binding YPTS_1636 IPR037062 Malic enzyme, N-terminal domain superfamily YPTS_1636 IPR023667 NAD-dependent malic enzyme, proteobacteria YPTS_1636 IPR036291 NAD(P)-binding domain superfamily YPTS_1636 IPR015884 Malic enzyme, conserved site YPTS_1636 IPR012301 Malic enzyme, N-terminal domain YPTS_1637 IPR016193 Cytidine deaminase-like YPTS_1637 IPR020797 Cytidine deaminase, bacteria YPTS_1637 IPR006263 Cytidine deaminase, homodimeric YPTS_1637 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPTS_1637 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTS_1637 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTS_1638 IPR007300 CidB/LrgB family YPTS_1638 IPR005261 Conserved hypothetical protein CHP00659 YPTS_1639 IPR005538 LrgA/CidA family YPTS_1639 IPR022957 Uncharacterised protein family UPF0299 YPTS_1640 IPR011701 Major facilitator superfamily YPTS_1640 IPR020846 Major facilitator superfamily domain YPTS_1640 IPR036259 MFS transporter superfamily YPTS_1644 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_1644 IPR015413 Methionyl/Leucyl tRNA synthetase YPTS_1644 IPR012340 Nucleic acid-binding, OB-fold YPTS_1644 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1644 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain YPTS_1644 IPR033911 Methioninyl-tRNA synthetase core domain YPTS_1644 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_1644 IPR002547 tRNA-binding domain YPTS_1644 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPTS_1644 IPR014758 Methionyl-tRNA synthetase YPTS_1644 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal YPTS_1644 IPR023458 Methionine-tRNA ligase, type 1 YPTS_1645 IPR034904 Fe-S cluster assembly domain superfamily YPTS_1645 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YPTS_1645 IPR019591 Mrp/NBP35 ATP-binding protein YPTS_1645 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1645 IPR000808 Mrp, conserved site YPTS_1646 IPR026008 Uridine kinase YPTS_1646 IPR006083 Phosphoribulokinase/uridine kinase YPTS_1646 IPR000764 Uridine kinase-like YPTS_1646 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1647 IPR011962 dCTP deaminase YPTS_1647 IPR036157 dUTPase-like superfamily YPTS_1647 IPR033704 dUTPase, trimeric YPTS_1647 IPR029054 dUTPase-like YPTS_1648 IPR007844 AsmA YPTS_1649 IPR005170 Transporter-associated domain YPTS_1649 IPR005496 Integral membrane protein TerC YPTS_1649 IPR000644 CBS domain YPTS_1649 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_1649 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_1650 IPR024726 Ferric iron reductase, C-terminal YPTS_1650 IPR022770 Ferric iron reductase FhuF domain YPTS_1650 IPR008090 Ferric iron reductase YPTS_1651 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1651 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPTS_1651 IPR021115 Pyridoxal-phosphate binding site YPTS_1651 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1652 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_1652 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTS_1654 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTS_1654 IPR022770 Ferric iron reductase FhuF domain YPTS_1654 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTS_1655 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1655 IPR017871 ABC transporter, conserved site YPTS_1655 IPR003439 ABC transporter-like YPTS_1655 IPR003593 AAA+ ATPase domain YPTS_1656 IPR037294 ABC transporter, BtuC-like YPTS_1656 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_1657 IPR037294 ABC transporter, BtuC-like YPTS_1657 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_1658 IPR002491 ABC transporter periplasmic binding domain YPTS_1659 IPR012910 TonB-dependent receptor, plug domain YPTS_1659 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_1659 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_1659 IPR011662 Secretin/TonB, short N-terminal domain YPTS_1659 IPR039423 TonB-dependent receptor-like YPTS_1659 IPR010917 TonB-dependent receptor, conserved site YPTS_1659 IPR010105 TonB-dependent siderophore receptor YPTS_1659 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_1660 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTS_1660 IPR022770 Ferric iron reductase FhuF domain YPTS_1660 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTS_1661 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_1661 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPTS_1661 IPR005835 Nucleotidyl transferase domain YPTS_1662 IPR005835 Nucleotidyl transferase domain YPTS_1662 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_1662 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPTS_1663 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_1663 IPR006183 6-phosphogluconate dehydrogenase YPTS_1663 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_1663 IPR036291 NAD(P)-binding domain superfamily YPTS_1663 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPTS_1663 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPTS_1663 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPTS_1663 IPR006184 6-phosphogluconate-binding site YPTS_1664 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily YPTS_1664 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPTS_1664 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPTS_1664 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPTS_1664 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPTS_1665 IPR004651 Histidine biosynthesis, HisF YPTS_1665 IPR011060 Ribulose-phosphate binding barrel YPTS_1665 IPR013785 Aldolase-type TIM barrel YPTS_1665 IPR006062 Histidine biosynthesis YPTS_1666 IPR013785 Aldolase-type TIM barrel YPTS_1666 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPTS_1666 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPTS_1666 IPR011060 Ribulose-phosphate binding barrel YPTS_1666 IPR006062 Histidine biosynthesis YPTS_1667 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPTS_1667 IPR017926 Glutamine amidotransferase YPTS_1667 IPR029062 Class I glutamine amidotransferase-like YPTS_1668 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTS_1668 IPR036412 HAD-like superfamily YPTS_1668 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPTS_1668 IPR020566 Histidine biosynthesis bifunctional protein HisB YPTS_1668 IPR005954 Histidinol-phosphatase YPTS_1668 IPR006543 Histidinol-phosphate phosphatase YPTS_1668 IPR023214 HAD superfamily YPTS_1668 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily YPTS_1668 IPR000807 Imidazoleglycerol-phosphate dehydratase YPTS_1668 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_1669 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1669 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1669 IPR005861 Histidinol-phosphate aminotransferase family YPTS_1669 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1669 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPTS_1669 IPR004839 Aminotransferase, class I/classII YPTS_1670 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1670 IPR001692 Histidinol dehydrogenase, conserved site YPTS_1670 IPR022695 Histidinol dehydrogenase, monofunctional YPTS_1670 IPR012131 Histidinol dehydrogenase YPTS_1671 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPTS_1671 IPR001348 ATP phosphoribosyltransferase HisG YPTS_1671 IPR020621 ATP phosphoribosyltransferase HisG, long form YPTS_1671 IPR013115 Histidine biosynthesis HisG, C-terminal YPTS_1671 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTS_1671 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTS_1671 IPR018198 ATP phosphoribosyltransferase, conserved site YPTS_1672 IPR001509 NAD-dependent epimerase/dehydratase YPTS_1672 IPR036291 NAD(P)-binding domain superfamily YPTS_1676 IPR001851 ABC transporter, permease YPTS_1677 IPR015861 ABC transporter, ribose import, RbsA YPTS_1677 IPR003439 ABC transporter-like YPTS_1677 IPR017871 ABC transporter, conserved site YPTS_1677 IPR003593 AAA+ ATPase domain YPTS_1677 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1678 IPR016205 Glycerol dehydrogenase YPTS_1678 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTS_1678 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTS_1680 IPR002293 Amino acid/polyamine transporter I YPTS_1681 IPR034748 Exonuclease I, C-terminal alpha-helical domain YPTS_1681 IPR034747 Exonuclease I, SH3-like domain YPTS_1681 IPR038649 Exonuclease I, SH3-like domain superfamily YPTS_1681 IPR023607 Exodeoxyribonuclease I YPTS_1681 IPR036397 Ribonuclease H superfamily YPTS_1681 IPR013620 Exodeoxyribonuclease I, C-terminal YPTS_1681 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTS_1681 IPR012337 Ribonuclease H-like superfamily YPTS_1683 IPR007458 Protein of unknown function DUF496 YPTS_1684 IPR022409 PKD/Chitinase domain YPTS_1684 IPR015217 Invasin, domain 3 YPTS_1684 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTS_1684 IPR008964 Invasin/intimin cell-adhesion fragments YPTS_1684 IPR038177 Inverse autotransporter, beta-domain superfamily YPTS_1684 IPR013783 Immunoglobulin-like fold YPTS_1684 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTS_1684 IPR024519 Inverse autotransporter, beta-domain YPTS_1684 IPR018392 LysM domain YPTS_1685 IPR011701 Major facilitator superfamily YPTS_1685 IPR036259 MFS transporter superfamily YPTS_1685 IPR020846 Major facilitator superfamily domain YPTS_1686 IPR007263 Protein of unknown function DUF393 YPTS_1688 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1688 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_1688 IPR036291 NAD(P)-binding domain superfamily YPTS_1689 IPR011234 Fumarylacetoacetase-like, C-terminal YPTS_1689 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTS_1690 IPR034610 L-fuconate dehydratase YPTS_1690 IPR029065 Enolase C-terminal domain-like YPTS_1690 IPR029017 Enolase-like, N-terminal YPTS_1690 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTS_1690 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTS_1690 IPR036849 Enolase-like, C-terminal domain superfamily YPTS_1692 IPR020920 L-lactate dehydrogenase, bacterial YPTS_1692 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPTS_1692 IPR037396 FMN hydroxy acid dehydrogenase domain YPTS_1692 IPR000262 FMN-dependent dehydrogenase YPTS_1692 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPTS_1692 IPR013785 Aldolase-type TIM barrel YPTS_1693 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPTS_1693 IPR023437 Argininosuccinate synthase, type 2 subfamily YPTS_1693 IPR001518 Argininosuccinate synthase YPTS_1693 IPR018223 Argininosuccinate synthase, conserved site YPTS_1693 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPTS_1693 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_1694 IPR002528 Multi antimicrobial extrusion protein YPTS_1696 IPR037950 Peptidoglycan deacetylase PgdA-like YPTS_1696 IPR002509 NodB homology domain YPTS_1696 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_1698 IPR018636 Protein of unknown function DUF2058 YPTS_1700 IPR001584 Integrase, catalytic core YPTS_1700 IPR036397 Ribonuclease H superfamily YPTS_1700 IPR012337 Ribonuclease H-like superfamily YPTS_1700 IPR017894 HTH domain, IS21 transposase-type YPTS_1700 IPR006120 Resolvase, HTH domain YPTS_1701 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_1701 IPR002611 IstB-like ATP-binding protein YPTS_1701 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1701 IPR003593 AAA+ ATPase domain YPTS_1701 IPR001270 ClpA/B family YPTS_1708 IPR010105 TonB-dependent siderophore receptor YPTS_1708 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_1708 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_1708 IPR012910 TonB-dependent receptor, plug domain YPTS_1708 IPR039426 Vitamin B12 transporter BtuB-like YPTS_1709 IPR000873 AMP-dependent synthetase/ligase YPTS_1709 IPR011963 2,3-dihydroxybenzoate-AMP ligase YPTS_1709 IPR020845 AMP-binding, conserved site YPTS_1709 IPR025110 AMP-binding enzyme, C-terminal domain YPTS_1710 IPR001031 Thioesterase YPTS_1710 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPTS_1710 IPR020802 Polyketide synthase, thioesterase domain YPTS_1710 IPR029058 Alpha/Beta hydrolase fold YPTS_1712 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTS_1712 IPR009081 Phosphopantetheine binding ACP domain YPTS_1712 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_1712 IPR016039 Thiolase-like YPTS_1712 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTS_1712 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_1712 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_1712 IPR018201 Beta-ketoacyl synthase, active site YPTS_1712 IPR001227 Acyl transferase domain superfamily YPTS_1712 IPR036736 ACP-like superfamily YPTS_1712 IPR001242 Condensation domain YPTS_1712 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_1712 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTS_1712 IPR014043 Acyl transferase YPTS_1712 IPR032821 Ketoacyl-synthetase, C-terminal extension YPTS_1713 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1713 IPR006162 Phosphopantetheine attachment site YPTS_1713 IPR009081 Phosphopantetheine binding ACP domain YPTS_1713 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTS_1713 IPR013217 Methyltransferase type 12 YPTS_1713 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_1713 IPR000873 AMP-dependent synthetase/ligase YPTS_1713 IPR020845 AMP-binding, conserved site YPTS_1713 IPR036736 ACP-like superfamily YPTS_1713 IPR010071 Amino acid adenylation domain YPTS_1713 IPR001242 Condensation domain YPTS_1713 IPR042099 AMP-dependent synthetase-like superfamily YPTS_1715 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_1715 IPR003593 AAA+ ATPase domain YPTS_1715 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1715 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_1715 IPR013113 FAD-binding 9, siderophore-interacting YPTS_1715 IPR017871 ABC transporter, conserved site YPTS_1715 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1715 IPR007037 Siderophore-interacting protein, C-terminal domain YPTS_1715 IPR017938 Riboflavin synthase-like beta-barrel YPTS_1715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1715 IPR003439 ABC transporter-like YPTS_1716 IPR003593 AAA+ ATPase domain YPTS_1716 IPR039421 Type I protein exporter YPTS_1716 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1716 IPR011917 ABC transporter, lipid A export, MsbA YPTS_1716 IPR017871 ABC transporter, conserved site YPTS_1716 IPR003439 ABC transporter-like YPTS_1716 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1716 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1717 IPR036259 MFS transporter superfamily YPTS_1717 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPTS_1717 IPR011701 Major facilitator superfamily YPTS_1718 IPR005801 ADC synthase YPTS_1718 IPR019999 Anthranilate synthase component I-like YPTS_1718 IPR015890 Chorismate-utilising enzyme, C-terminal YPTS_1718 IPR019996 Salicylate synthase YPTS_1721 IPR000792 Transcription regulator LuxR, C-terminal YPTS_1721 IPR011006 CheY-like superfamily YPTS_1721 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1721 IPR001789 Signal transduction response regulator, receiver domain YPTS_1722 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPTS_1722 IPR004681 TRAP transporter large membrane protein DctM YPTS_1724 IPR038404 TRAP transporter solute receptor DctP superfamily YPTS_1724 IPR018389 TRAP transporter solute receptor DctP/TeaA YPTS_1724 IPR004682 TRAP transporter solute receptor, DctP family YPTS_1725 IPR008278 4'-phosphopantetheinyl transferase domain YPTS_1725 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPTS_1725 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain YPTS_1725 IPR003542 Enterobactin synthetase-like, component D YPTS_1727 IPR031704 Glycosyl hydrolase family 36, N-terminal YPTS_1727 IPR000111 Glycoside hydrolase family 27/36, conserved site YPTS_1727 IPR031705 Glycosyl hydrolase family 36, C-terminal YPTS_1727 IPR002252 Glycoside hydrolase family 36 YPTS_1727 IPR017853 Glycoside hydrolase superfamily YPTS_1727 IPR038417 Alpha-galactosidase, N-terminal domain superfamily YPTS_1727 IPR013785 Aldolase-type TIM barrel YPTS_1728 IPR000576 LacY/RafB permease family YPTS_1728 IPR018457 LacY/RafB permease family, conserved site YPTS_1728 IPR036259 MFS transporter superfamily YPTS_1728 IPR020846 Major facilitator superfamily domain YPTS_1729 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_1729 IPR000843 LacI-type HTH domain YPTS_1729 IPR028082 Periplasmic binding protein-like I YPTS_1729 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_1730 IPR024079 Metallopeptidase, catalytic domain superfamily YPTS_1730 IPR010384 MtfA family YPTS_1730 IPR042252 MtfA, N-terminal YPTS_1733 IPR003593 AAA+ ATPase domain YPTS_1733 IPR011527 ABC transporter type 1, transmembrane domain YPTS_1733 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_1733 IPR003439 ABC transporter-like YPTS_1733 IPR017871 ABC transporter, conserved site YPTS_1733 IPR039421 Type I protein exporter YPTS_1733 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1736 IPR009057 Homeobox-like domain superfamily YPTS_1736 IPR020449 Transcription regulator HTH, AraC- type YPTS_1736 IPR018060 DNA binding HTH domain, AraC-type YPTS_1736 IPR018062 HTH domain AraC-type, conserved site YPTS_1738 IPR020262 Uncharacterised protein family YecJ YPTS_1739 IPR025611 YobH-like protein YPTS_1740 IPR025594 YebO-like protein YPTS_1743 IPR004840 Amino acid permease, conserved site YPTS_1743 IPR004841 Amino acid permease/ SLC12A domain YPTS_1744 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPTS_1744 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_1746 IPR019672 Protein of unknown function DUF2627 YPTS_1747 IPR019844 Cold-shock (CSD) domain YPTS_1747 IPR012156 Cold shock, CspA YPTS_1747 IPR002059 Cold-shock protein, DNA-binding YPTS_1747 IPR012340 Nucleic acid-binding, OB-fold YPTS_1747 IPR011129 Cold shock domain YPTS_1749 IPR025714 Methyltransferase domain YPTS_1749 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1749 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPTS_1751 IPR013656 PAS fold-4 YPTS_1751 IPR013655 PAS fold-3 YPTS_1751 IPR035965 PAS domain superfamily YPTS_1751 IPR000160 GGDEF domain YPTS_1751 IPR000700 PAS-associated, C-terminal YPTS_1751 IPR001610 PAC motif YPTS_1751 IPR029787 Nucleotide cyclase YPTS_1751 IPR007895 MASE1 YPTS_1751 IPR035919 EAL domain superfamily YPTS_1751 IPR000014 PAS domain YPTS_1751 IPR001633 EAL domain YPTS_1752 IPR010916 TonB box, conserved site YPTS_1752 IPR010917 TonB-dependent receptor, conserved site YPTS_1752 IPR010105 TonB-dependent siderophore receptor YPTS_1752 IPR012910 TonB-dependent receptor, plug domain YPTS_1752 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_1752 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_1752 IPR030149 TonB-dependent siderophore receptor FcuA/FatA YPTS_1752 IPR039423 TonB-dependent receptor-like YPTS_1752 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_1753 IPR022929 Putative manganese efflux pump MntP YPTS_1753 IPR003810 Putative manganese efflux pump YPTS_1754 IPR009328 Protein of unknown function DUF986 YPTS_1755 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPTS_1756 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPTS_1757 IPR033887 PTS system mannose/sorbose specific IIA subunit YPTS_1757 IPR013789 Phosphotransferase system, mannose family IIA component YPTS_1757 IPR004701 Phosphotransferase system, mannose-type IIA component YPTS_1757 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPTS_1757 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPTS_1757 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPTS_1757 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPTS_1759 IPR005170 Transporter-associated domain YPTS_1759 IPR005496 Integral membrane protein TerC YPTS_1759 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_1759 IPR000644 CBS domain YPTS_1759 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_1760 IPR000835 MarR-type HTH domain YPTS_1760 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1760 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1760 IPR012712 HTH-type transcriptional regulator HpaR/FarR YPTS_1760 IPR023187 Transcriptional regulator MarR-type, conserved site YPTS_1761 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTS_1761 IPR011234 Fumarylacetoacetase-like, C-terminal YPTS_1761 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPTS_1761 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPTS_1762 IPR011234 Fumarylacetoacetase-like, C-terminal YPTS_1762 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTS_1762 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPTS_1762 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPTS_1763 IPR015590 Aldehyde dehydrogenase domain YPTS_1763 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YPTS_1763 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_1763 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_1763 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_1763 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_1763 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1764 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase YPTS_1764 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPTS_1765 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPTS_1765 IPR014347 Tautomerase/MIF superfamily YPTS_1766 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase YPTS_1766 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTS_1766 IPR011234 Fumarylacetoacetase-like, C-terminal YPTS_1767 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales YPTS_1767 IPR040442 Pyruvate kinase-like domain superfamily YPTS_1767 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPTS_1767 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_1767 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPTS_1768 IPR020846 Major facilitator superfamily domain YPTS_1768 IPR011701 Major facilitator superfamily YPTS_1768 IPR036259 MFS transporter superfamily YPTS_1769 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPTS_1769 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPTS_1769 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPTS_1769 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPTS_1769 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPTS_1769 IPR004925 HpaB/PvcC/4-BUDH YPTS_1769 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPTS_1770 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPTS_1770 IPR002563 Flavin reductase like domain YPTS_1770 IPR012349 FMN-binding split barrel YPTS_1771 IPR029009 Allosteric substrate binding domain superfamily YPTS_1771 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPTS_1771 IPR005130 Serine dehydratase-like, alpha subunit YPTS_1771 IPR005131 Serine dehydratase beta chain YPTS_1772 IPR000086 NUDIX hydrolase domain YPTS_1772 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_1772 IPR000059 NUDIX hydrolase, NudL, conserved site YPTS_1772 IPR023735 Uncharacterised nudix hydrolase NudL YPTS_1773 IPR006805 Anthranilate synthase component I, N-terminal YPTS_1773 IPR015890 Chorismate-utilising enzyme, C-terminal YPTS_1773 IPR019999 Anthranilate synthase component I-like YPTS_1773 IPR005801 ADC synthase YPTS_1773 IPR005802 Aminodeoxychorismate synthase, component I YPTS_1774 IPR005371 Uncharacterised protein family UPF0181 YPTS_1775 IPR011054 Rudiment single hybrid motif YPTS_1775 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase YPTS_1775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPTS_1775 IPR011761 ATP-grasp fold YPTS_1775 IPR016185 Pre-ATP-grasp domain superfamily YPTS_1775 IPR013815 ATP-grasp fold, subdomain 1 YPTS_1776 IPR001650 Helicase, C-terminal YPTS_1776 IPR011545 DEAD/DEAH box helicase domain YPTS_1776 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPTS_1776 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTS_1776 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTS_1776 IPR028619 ATP-dependent RNA helicase DbpA YPTS_1776 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_1776 IPR014014 RNA helicase, DEAD-box type, Q motif YPTS_1776 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1777 IPR038627 YebG-like superfamily YPTS_1777 IPR009813 Uncharacterised protein family YebG YPTS_1779 IPR038703 YebF/Cmi superfamily YPTS_1779 IPR020236 Uncharacterised protein family YebF YPTS_1779 IPR025603 YebF/Colicin-M immunity protein YPTS_1780 IPR002470 Peptidase S9A, prolyl oligopeptidase YPTS_1780 IPR023302 Peptidase S9A, N-terminal domain YPTS_1780 IPR029058 Alpha/Beta hydrolase fold YPTS_1780 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPTS_1780 IPR002471 Peptidase S9, serine active site YPTS_1782 IPR005944 Proline iminopeptidase YPTS_1782 IPR029058 Alpha/Beta hydrolase fold YPTS_1782 IPR002410 Peptidase S33 YPTS_1782 IPR000073 Alpha/beta hydrolase fold-1 YPTS_1783 IPR009052 DNA polymerase III-theta, bacterial YPTS_1783 IPR036745 DNA polymerase III-theta superfamily YPTS_1784 IPR008331 Ferritin/DPS protein domain YPTS_1784 IPR012347 Ferritin-like YPTS_1784 IPR009040 Ferritin-like diiron domain YPTS_1784 IPR041719 Ferritin, prokaryotic-type YPTS_1784 IPR009078 Ferritin-like superfamily YPTS_1784 IPR001519 Ferritin YPTS_1785 IPR014756 Immunoglobulin E-set YPTS_1785 IPR007348 CopC domain YPTS_1785 IPR032694 Copper transport protein C/D YPTS_1787 IPR019648 Protein of unknown function DUF2511 YPTS_1789 IPR001207 Transposase, mutator type YPTS_1792 IPR006136 Flagellar biosynthetic protein FlhB YPTS_1792 IPR029025 Type III secretion system substrate exporter, C-terminal YPTS_1792 IPR006135 Type III secretion system substrate exporter YPTS_1793 IPR006301 Flagellar biosynthesis protein FlhA YPTS_1793 IPR042193 FHIPEP, domain 3 YPTS_1793 IPR001712 Type III secretion system FHIPEP YPTS_1793 IPR042196 FHIPEP, domain 4 YPTS_1793 IPR042194 FHIPEP, domain 1 YPTS_1793 IPR025505 FHIPEP conserved site YPTS_1794 IPR009420 Flagellar protein FlhE YPTS_1795 IPR013117 Intimin, C-terminal YPTS_1795 IPR015217 Invasin, domain 3 YPTS_1795 IPR016186 C-type lectin-like/link domain superfamily YPTS_1795 IPR013783 Immunoglobulin-like fold YPTS_1795 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTS_1795 IPR016187 C-type lectin fold YPTS_1795 IPR024519 Inverse autotransporter, beta-domain YPTS_1795 IPR038177 Inverse autotransporter, beta-domain superfamily YPTS_1795 IPR008964 Invasin/intimin cell-adhesion fragments YPTS_1795 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTS_1796 IPR036679 FlgN-like superfamily YPTS_1796 IPR007809 FlgN-like protein YPTS_1797 IPR035890 Anti-sigma-28 factor FlgM superfamily YPTS_1797 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPTS_1797 IPR007412 Anti-sigma-28 factor, FlgM YPTS_1798 IPR013974 SAF domain YPTS_1798 IPR041231 FlgA, N-terminal YPTS_1798 IPR039246 Flagellar protein FlgA YPTS_1798 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTS_1799 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1799 IPR019776 Flagellar basal body rod protein, conserved site YPTS_1799 IPR006300 Flagellar basal-body rod protein FlgB YPTS_1800 IPR019776 Flagellar basal body rod protein, conserved site YPTS_1800 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1800 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_1800 IPR006299 Flagellar basal-body rod protein FlgC YPTS_1801 IPR005648 Flagellar hook capping protein YPTS_1801 IPR025963 FlgD Tudor-like domain YPTS_1801 IPR025965 FlgD Ig-like domain YPTS_1802 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_1802 IPR011491 Flagellar hook protein FlgE YPTS_1802 IPR019776 Flagellar basal body rod protein, conserved site YPTS_1802 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1802 IPR037058 Flagellar hook protein FlgE superfamily YPTS_1802 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_1802 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_1803 IPR019776 Flagellar basal body rod protein, conserved site YPTS_1803 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1803 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_1803 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_1803 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_1804 IPR012834 Flagellar basal-body rod FlgG YPTS_1804 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_1804 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_1804 IPR019776 Flagellar basal body rod protein, conserved site YPTS_1804 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1804 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_1805 IPR000527 Flagellar L-ring protein YPTS_1806 IPR001782 Flagellar P-ring protein YPTS_1807 IPR019301 Flagellar protein FlgJ, N-terminal YPTS_1807 IPR013377 Peptidoglycan hydrolase FlgJ YPTS_1807 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPTS_1808 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_1808 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_1808 IPR002371 Flagellar hook-associated protein 1 YPTS_1809 IPR001029 Flagellin, D0/D1 domain YPTS_1809 IPR013384 Flagellar hook-associated protein 3 YPTS_1810 IPR037171 NagB/RpiA transferase-like YPTS_1810 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_1810 IPR007324 Sugar-binding domain, putative YPTS_1810 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1811 IPR001303 Class II aldolase/adducin N-terminal YPTS_1811 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_1811 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_1811 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YPTS_1811 IPR036291 NAD(P)-binding domain superfamily YPTS_1813 IPR001851 ABC transporter, permease YPTS_1814 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPTS_1814 IPR028082 Periplasmic binding protein-like I YPTS_1814 IPR025997 Periplasmic binding protein YPTS_1815 IPR003593 AAA+ ATPase domain YPTS_1815 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1815 IPR015861 ABC transporter, ribose import, RbsA YPTS_1815 IPR003439 ABC transporter-like YPTS_1815 IPR017871 ABC transporter, conserved site YPTS_1816 IPR001851 ABC transporter, permease YPTS_1817 IPR030877 Sulfofructose kinase YPTS_1817 IPR011611 Carbohydrate kinase PfkB YPTS_1817 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_1817 IPR002139 Ribokinase/fructokinase YPTS_1817 IPR029056 Ribokinase-like YPTS_1820 IPR006303 Flagellar biosynthesis protein FliR YPTS_1820 IPR002010 Type III secretion system inner membrane R protein YPTS_1821 IPR002191 Bacterial export protein family 3 YPTS_1821 IPR006305 Flagellar biosynthesis protein FliQ YPTS_1822 IPR005838 Type III secretion system inner membrane P protein YPTS_1822 IPR005837 Flagellar transport protein FliP YPTS_1823 IPR022781 Flagellar biosynthesis protein, FliO YPTS_1824 IPR012826 Flagellar motor switch FliN YPTS_1824 IPR031576 Flagellar motor switch protein FliN, N-terminal YPTS_1824 IPR036429 SpoA-like superfamily YPTS_1824 IPR001543 Surface presentation of antigen (SpoA) YPTS_1824 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTS_1825 IPR036429 SpoA-like superfamily YPTS_1825 IPR001543 Surface presentation of antigen (SpoA) YPTS_1825 IPR001689 Flagellar motor switch protein FliM YPTS_1825 IPR028976 CheC-like superfamily YPTS_1826 IPR005503 Flagellar basal body-associated protein FliL YPTS_1827 IPR038610 FliK-like, C-terminal domain superfamily YPTS_1827 IPR001635 Flagellar hook-length control protein FliK YPTS_1827 IPR021136 Flagellar hook-length control protein-like, C-terminal YPTS_1828 IPR012823 Flagellar export FliJ YPTS_1828 IPR018006 Flagellar FliJ, proteobacteria YPTS_1829 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_1829 IPR040627 T3SS EscN ATPase, C-terminal YPTS_1829 IPR005714 ATPase, type III secretion system, FliI/YscN YPTS_1829 IPR003593 AAA+ ATPase domain YPTS_1829 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTS_1829 IPR020005 Flagellar export ATPase FliI, clade 1 YPTS_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1829 IPR032463 ATPase, type III secretion system, FliI YPTS_1830 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPTS_1830 IPR000563 Flagellar assembly protein FliH YPTS_1831 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPTS_1831 IPR032779 Flagellar motor switch protein FliG, middle domain YPTS_1831 IPR000090 Flagellar motor switch protein FliG YPTS_1831 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPTS_1831 IPR023087 Flagellar motor switch protein FliG, C-terminal YPTS_1832 IPR013556 Flagellar M-ring C-terminal YPTS_1832 IPR000067 Flagellar M-ring protein FliF YPTS_1832 IPR006182 Secretory protein YscJ/FliF YPTS_1833 IPR001624 Flagellar hook-basal body complex protein FliE YPTS_1836 IPR003265 HhH-GPD domain YPTS_1836 IPR011257 DNA glycosylase YPTS_1837 IPR006674 HD domain YPTS_1837 IPR037522 HD-GYP domain YPTS_1837 IPR003607 HD/PDEase domain YPTS_1837 IPR006675 HDIG domain YPTS_1838 IPR009057 Homeobox-like domain superfamily YPTS_1838 IPR020449 Transcription regulator HTH, AraC- type YPTS_1838 IPR018062 HTH domain AraC-type, conserved site YPTS_1838 IPR018060 DNA binding HTH domain, AraC-type YPTS_1839 IPR008622 Flagellar protein FliT YPTS_1840 IPR036584 Flagellar protein FliS superfamily YPTS_1840 IPR003713 Flagellar protein FliS YPTS_1841 IPR010809 Flagellar hook-associated protein 2, C-terminal YPTS_1841 IPR040026 Flagellar hook-associated protein 2 YPTS_1841 IPR010810 Flagellin hook, IN motif YPTS_1841 IPR003481 Flagellar hook-associated protein 2, N-terminal YPTS_1842 IPR001029 Flagellin, D0/D1 domain YPTS_1842 IPR001492 Flagellin YPTS_1842 IPR014981 Flagellin D3 YPTS_1843 IPR007630 RNA polymerase sigma-70 region 4 YPTS_1843 IPR013325 RNA polymerase sigma factor, region 2 YPTS_1843 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPTS_1843 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_1843 IPR007624 RNA polymerase sigma-70 region 3 YPTS_1843 IPR028617 RNA polymerase sigma factor FliA YPTS_1843 IPR000943 RNA polymerase sigma-70 YPTS_1843 IPR014284 RNA polymerase sigma-70 like domain YPTS_1843 IPR007627 RNA polymerase sigma-70 region 2 YPTS_1845 IPR022523 Flagellar regulator, FliZ YPTS_1845 IPR004107 Integrase, SAM-like, N-terminal YPTS_1846 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_1846 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_1846 IPR023702 D-cysteine desulphhydrase, bacterial YPTS_1846 IPR005966 D-cysteine desulfhydrase YPTS_1846 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPTS_1854 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_1854 IPR029041 FAD-linked oxidoreductase-like YPTS_1854 IPR024089 Proline dehydrogenase PutA, domain I/II YPTS_1854 IPR010985 Ribbon-helix-helix YPTS_1854 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_1854 IPR024082 Proline dehydrogenase PutA, domain II YPTS_1854 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain YPTS_1854 IPR002872 Proline dehydrogenase domain YPTS_1854 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_1854 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_1854 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPTS_1854 IPR025703 Bifunctional protein PutA YPTS_1854 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_1854 IPR015590 Aldehyde dehydrogenase domain YPTS_1854 IPR024090 Proline dehydrogenase PutA, domain I YPTS_1854 IPR013321 Arc-type ribbon-helix-helix YPTS_1856 IPR018212 Sodium/solute symporter, conserved site YPTS_1856 IPR001734 Sodium/solute symporter YPTS_1856 IPR011851 Sodium/proline symporter YPTS_1856 IPR038377 Sodium/glucose symporter superfamily YPTS_1857 IPR004923 Iron permease FTR1/Fip1/EfeU YPTS_1858 IPR018976 Imelysin-like domain YPTS_1858 IPR038352 Imelysin-like domain superfamily YPTS_1858 IPR034981 EfeO/Algp7, imelysin-like domain YPTS_1858 IPR028096 EfeO-type cupredoxin-like domain YPTS_1858 IPR008972 Cupredoxin YPTS_1859 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_1859 IPR011008 Dimeric alpha-beta barrel YPTS_1859 IPR006314 Dyp-type peroxidase YPTS_1859 IPR006313 Deferrochelatase/peroxidase EfeB YPTS_1860 IPR010089 Flavoprotein WrbA-like YPTS_1860 IPR005025 NADPH-dependent FMN reductase-like YPTS_1860 IPR008254 Flavodoxin/nitric oxide synthase YPTS_1860 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic YPTS_1860 IPR029039 Flavoprotein-like superfamily YPTS_1861 IPR015915 Kelch-type beta propeller YPTS_1861 IPR006652 Kelch repeat type 1 YPTS_1861 IPR019936 Mutatrotase, YjhT-like YPTS_1862 IPR004841 Amino acid permease/ SLC12A domain YPTS_1862 IPR004840 Amino acid permease, conserved site YPTS_1863 IPR000758 Virulence-related outer membrane protein YPTS_1863 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_1863 IPR027385 Outer membrane protein beta-barrel domain YPTS_1865 IPR009707 Membrane protein GlpM/YdgC YPTS_1867 IPR011006 CheY-like superfamily YPTS_1867 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1867 IPR001789 Signal transduction response regulator, receiver domain YPTS_1867 IPR000792 Transcription regulator LuxR, C-terminal YPTS_1868 IPR038476 UvrC homology region 2 superfamily YPTS_1868 IPR036876 UVR domain superfamily YPTS_1868 IPR000305 GIY-YIG endonuclease YPTS_1868 IPR004791 UvrABC system, subunit C YPTS_1868 IPR035901 GIY-YIG endonuclease superfamily YPTS_1868 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTS_1868 IPR001162 UvrC family homology region YPTS_1868 IPR010994 RuvA domain 2-like YPTS_1868 IPR001943 UVR domain YPTS_1869 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPTS_1869 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPTS_1869 IPR000462 CDP-alcohol phosphatidyltransferase YPTS_1870 IPR007684 Zinc finger, Ogr/Delta-type YPTS_1876 IPR035089 Tail sheath protein, subtilisin-like domain YPTS_1876 IPR020287 Tail sheath protein, C-terminal domain YPTS_1883 IPR008514 Type VI secretion system effector, Hcp YPTS_1883 IPR036624 Hcp1-like superfamily YPTS_1897 IPR006430 Phage portal protein PBSX family YPTS_1897 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTS_1902 IPR008766 Replication gene A protein YPTS_1903 IPR001525 C-5 cytosine methyltransferase YPTS_1903 IPR018117 DNA methylase, C-5 cytosine-specific, active site YPTS_1903 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1904 IPR023095 Adenine-specific methyltransferase, domain 2 YPTS_1904 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPTS_1904 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1904 IPR012263 Adenine modification methylase, M.EcoRV-type YPTS_1904 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_1905 IPR012337 Ribonuclease H-like superfamily YPTS_1905 IPR035965 PAS domain superfamily YPTS_1905 IPR036397 Ribonuclease H superfamily YPTS_1905 IPR000014 PAS domain YPTS_1905 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPTS_1905 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTS_1919 IPR002104 Integrase, catalytic domain YPTS_1919 IPR004107 Integrase, SAM-like, N-terminal YPTS_1919 IPR023009 Tyrosine recombinase XerC/XerD YPTS_1919 IPR011931 Tyrosine recombinase XerC YPTS_1919 IPR010998 Integrase/recombinase, N-terminal YPTS_1919 IPR013762 Integrase-like, catalytic domain superfamily YPTS_1919 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_1927 IPR036624 Hcp1-like superfamily YPTS_1927 IPR008514 Type VI secretion system effector, Hcp YPTS_1933 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1933 IPR041698 Methyltransferase domain 25 YPTS_1933 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPTS_1938 IPR002514 Transposase IS3/IS911family YPTS_1938 IPR009057 Homeobox-like domain superfamily YPTS_1950 IPR001207 Transposase, mutator type YPTS_1951 IPR001207 Transposase, mutator type YPTS_1959 IPR023945 N-acetylmannosamine kinase, bacterial YPTS_1959 IPR000600 ROK family YPTS_1961 IPR004104 Oxidoreductase, C-terminal YPTS_1961 IPR000683 Oxidoreductase, N-terminal YPTS_1961 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase YPTS_1961 IPR036291 NAD(P)-binding domain superfamily YPTS_1963 IPR035906 MetI-like superfamily YPTS_1963 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1964 IPR035906 MetI-like superfamily YPTS_1964 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_1965 IPR003439 ABC transporter-like YPTS_1965 IPR013611 Transport-associated OB, type 2 YPTS_1965 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1965 IPR017871 ABC transporter, conserved site YPTS_1965 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTS_1965 IPR003593 AAA+ ATPase domain YPTS_1965 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_1966 IPR016147 Pili assembly chaperone, N-terminal YPTS_1966 IPR018046 Pili assembly chaperone, conserved site YPTS_1966 IPR013783 Immunoglobulin-like fold YPTS_1966 IPR001829 Pili assembly chaperone, bacterial YPTS_1966 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_1966 IPR016148 Pili assembly chaperone, C-terminal YPTS_1966 IPR008962 PapD-like superfamily YPTS_1968 IPR037224 PapC, N-terminal domain superfamily YPTS_1968 IPR025885 PapC, N-terminal domain YPTS_1968 IPR025949 PapC-like, C-terminal domain YPTS_1968 IPR000015 Outer membrane usher protein YPTS_1968 IPR018030 Fimbrial membrane usher, conserved site YPTS_1968 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_1969 IPR008962 PapD-like superfamily YPTS_1969 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_1969 IPR016148 Pili assembly chaperone, C-terminal YPTS_1969 IPR018046 Pili assembly chaperone, conserved site YPTS_1969 IPR016147 Pili assembly chaperone, N-terminal YPTS_1969 IPR013783 Immunoglobulin-like fold YPTS_1969 IPR001829 Pili assembly chaperone, bacterial YPTS_1971 IPR005467 Histidine kinase domain YPTS_1971 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_1971 IPR011006 CheY-like superfamily YPTS_1971 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_1971 IPR036641 HPT domain superfamily YPTS_1971 IPR000014 PAS domain YPTS_1971 IPR000700 PAS-associated, C-terminal YPTS_1971 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_1971 IPR035965 PAS domain superfamily YPTS_1971 IPR013767 PAS fold YPTS_1971 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_1971 IPR001789 Signal transduction response regulator, receiver domain YPTS_1971 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_1971 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_1971 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_1972 IPR011006 CheY-like superfamily YPTS_1972 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_1972 IPR000792 Transcription regulator LuxR, C-terminal YPTS_1972 IPR001789 Signal transduction response regulator, receiver domain YPTS_1973 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPTS_1973 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily YPTS_1973 IPR003702 Acetyl-CoA hydrolase/transferase YPTS_1973 IPR037171 NagB/RpiA transferase-like YPTS_1974 IPR016790 Thiol ester hydratase, Rv0216, predicted YPTS_1974 IPR029069 HotDog domain superfamily YPTS_1974 IPR002539 MaoC-like dehydratase domain YPTS_1975 IPR011206 Citrate lyase beta subunit-like YPTS_1975 IPR040442 Pyruvate kinase-like domain superfamily YPTS_1975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_1975 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPTS_1976 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1976 IPR000847 Transcription regulator HTH, LysR YPTS_1976 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1976 IPR005119 LysR, substrate-binding YPTS_1976 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain YPTS_1980 IPR006680 Amidohydrolase-related YPTS_1980 IPR032466 Metal-dependent hydrolase YPTS_1982 IPR003667 NqrDE/RnfAE YPTS_1982 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPTS_1983 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_1983 IPR004839 Aminotransferase, class I/classII YPTS_1983 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_1983 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_1984 IPR004841 Amino acid permease/ SLC12A domain YPTS_1984 IPR004840 Amino acid permease, conserved site YPTS_1985 IPR014036 DeoR C-terminal sensor domain YPTS_1985 IPR036390 Winged helix DNA-binding domain superfamily YPTS_1985 IPR001034 DeoR-type HTH domain YPTS_1985 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_1985 IPR037171 NagB/RpiA transferase-like YPTS_1985 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_1986 IPR015868 Glutaminase YPTS_1986 IPR012338 Beta-lactamase/transpeptidase-like YPTS_1988 IPR004923 Iron permease FTR1/Fip1/EfeU YPTS_1989 IPR038482 Periplasmic metal-binding protein tp34-type superfamily YPTS_1989 IPR018470 Periplasmic metal-binding protein Tp34-type YPTS_1992 IPR003593 AAA+ ATPase domain YPTS_1992 IPR003838 ABC transporter permease protein domain YPTS_1992 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1992 IPR003439 ABC transporter-like YPTS_1992 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTS_1992 IPR017871 ABC transporter, conserved site YPTS_1992 IPR025857 MacB-like periplasmic core domain YPTS_1994 IPR003439 ABC transporter-like YPTS_1994 IPR003593 AAA+ ATPase domain YPTS_1994 IPR003838 ABC transporter permease protein domain YPTS_1994 IPR025857 MacB-like periplasmic core domain YPTS_1994 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTS_1994 IPR017871 ABC transporter, conserved site YPTS_1994 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_1995 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTS_1995 IPR036249 Thioredoxin-like superfamily YPTS_1995 IPR023555 Thiol-disulphide oxidoreductase ResA YPTS_1995 IPR013766 Thioredoxin domain YPTS_1997 IPR015392 Domain of unknown function DUF1971 YPTS_1997 IPR014710 RmlC-like jelly roll fold YPTS_1997 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPTS_1997 IPR004537 Tellurite resistance methyltransferase, TehB YPTS_1997 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_1997 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPTS_1998 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTS_1998 IPR036005 Creatinase/aminopeptidase-like YPTS_1998 IPR000994 Peptidase M24 YPTS_1999 IPR013026 Tetratricopeptide repeat-containing domain YPTS_1999 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_1999 IPR019734 Tetratricopeptide repeat YPTS_1999 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPTS_2000 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_2000 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPTS_2000 IPR002509 NodB homology domain YPTS_2000 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal YPTS_2001 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPTS_2001 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_2001 IPR001173 Glycosyltransferase 2-like YPTS_2002 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPTS_2005 IPR003714 PhoH-like protein YPTS_2005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2006 IPR004713 Calcium/proton exchanger YPTS_2006 IPR004837 Sodium/calcium exchanger membrane region YPTS_2007 IPR029095 NarX-like, N-terminal YPTS_2007 IPR005467 Histidine kinase domain YPTS_2007 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPTS_2007 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2007 IPR042295 NarX-like, N-terminal domain superfamily YPTS_2007 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2007 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPTS_2007 IPR003660 HAMP domain YPTS_2008 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2008 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2008 IPR000524 Transcription regulator HTH, GntR YPTS_2008 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2008 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2008 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2008 IPR004839 Aminotransferase, class I/classII YPTS_2011 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPTS_2011 IPR004636 Acetylornithine/Succinylornithine transaminase family YPTS_2011 IPR005814 Aminotransferase class-III YPTS_2011 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2011 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2011 IPR026330 Succinylornithine transaminase YPTS_2011 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2012 IPR007041 Arginine N-succinyltransferase AstA/AruG YPTS_2012 IPR016181 Acyl-CoA N-acyltransferase YPTS_2012 IPR017650 Arginine N-succinyltransferase YPTS_2013 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_2013 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_2013 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_2013 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_2013 IPR015590 Aldehyde dehydrogenase domain YPTS_2013 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_2013 IPR017649 Succinylglutamate-semialdehyde dehydrogenase YPTS_2014 IPR037031 Succinylarginine dihydrolase superfamily YPTS_2014 IPR007079 Succinylarginine dihydrolase YPTS_2015 IPR016681 Succinylglutamate desuccinylase YPTS_2015 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPTS_2016 IPR023614 Porin domain superfamily YPTS_2016 IPR033900 Porin domain, Gram-negative type YPTS_2016 IPR001897 Porin, gammaproteobacterial YPTS_2016 IPR001702 Porin, Gram-negative type YPTS_2016 IPR013793 Porin, Gram-negative type, conserved site YPTS_2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2017 IPR002611 IstB-like ATP-binding protein YPTS_2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_2017 IPR003593 AAA+ ATPase domain YPTS_2017 IPR001270 ClpA/B family YPTS_2018 IPR006120 Resolvase, HTH domain YPTS_2018 IPR012337 Ribonuclease H-like superfamily YPTS_2018 IPR036397 Ribonuclease H superfamily YPTS_2018 IPR017894 HTH domain, IS21 transposase-type YPTS_2018 IPR001584 Integrase, catalytic core YPTS_2019 IPR001702 Porin, Gram-negative type YPTS_2019 IPR001897 Porin, gammaproteobacterial YPTS_2019 IPR013793 Porin, Gram-negative type, conserved site YPTS_2019 IPR023614 Porin domain superfamily YPTS_2019 IPR033900 Porin domain, Gram-negative type YPTS_2021 IPR006680 Amidohydrolase-related YPTS_2021 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_2021 IPR032466 Metal-dependent hydrolase YPTS_2021 IPR005920 Imidazolonepropionase YPTS_2022 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPTS_2022 IPR010248 Histidine utilization repressor YPTS_2022 IPR000524 Transcription regulator HTH, GntR YPTS_2022 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2022 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2022 IPR011663 UbiC transcription regulator-associated YPTS_2023 IPR006680 Amidohydrolase-related YPTS_2023 IPR023512 Deaminase MtaD/DadD YPTS_2023 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_2023 IPR032466 Metal-dependent hydrolase YPTS_2026 IPR016039 Thiolase-like YPTS_2026 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPTS_2026 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPTS_2026 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPTS_2027 IPR036291 NAD(P)-binding domain superfamily YPTS_2027 IPR001509 NAD-dependent epimerase/dehydratase YPTS_2040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2040 IPR016584 Methyltransferase VrtF-like YPTS_2040 IPR013217 Methyltransferase type 12 YPTS_2041 IPR036291 NAD(P)-binding domain superfamily YPTS_2041 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2041 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2049 IPR006290 Heavy metal sensor kinase YPTS_2049 IPR003660 HAMP domain YPTS_2049 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2049 IPR005467 Histidine kinase domain YPTS_2049 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2049 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2049 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2049 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2050 IPR011006 CheY-like superfamily YPTS_2050 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2050 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2050 IPR001789 Signal transduction response regulator, receiver domain YPTS_2050 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPTS_2050 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2051 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain YPTS_2051 IPR029058 Alpha/Beta hydrolase fold YPTS_2055 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPTS_2055 IPR012675 Beta-grasp domain superfamily YPTS_2055 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPTS_2055 IPR006073 GTP binding domain YPTS_2055 IPR041706 YchF, N-terminal YPTS_2055 IPR013029 YchF, C-terminal domain YPTS_2055 IPR023192 TGS-like domain superfamily YPTS_2055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2055 IPR004095 TGS YPTS_2055 IPR012676 TGS-like YPTS_2056 IPR036416 Peptidyl-tRNA hydrolase superfamily YPTS_2056 IPR001328 Peptidyl-tRNA hydrolase YPTS_2056 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPTS_2057 IPR019698 Protein of unknown function DUF2583 YPTS_2058 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPTS_2058 IPR000836 Phosphoribosyltransferase domain YPTS_2058 IPR029057 Phosphoribosyltransferase-like YPTS_2058 IPR005946 Ribose-phosphate pyrophosphokinase YPTS_2058 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type YPTS_2058 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPTS_2060 IPR006204 GHMP kinase N-terminal domain YPTS_2060 IPR036554 GHMP kinase, C-terminal domain superfamily YPTS_2060 IPR013750 GHMP kinase, C-terminal domain YPTS_2060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_2060 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_2060 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPTS_2061 IPR004565 Outer membrane lipoprotein LolB YPTS_2061 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPTS_2062 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPTS_2062 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPTS_2062 IPR018214 Glutamyl-tRNA reductase, conserved site YPTS_2062 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPTS_2062 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily YPTS_2062 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTS_2062 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily YPTS_2062 IPR036291 NAD(P)-binding domain superfamily YPTS_2063 IPR005139 Peptide chain release factor YPTS_2063 IPR004373 Peptide chain release factor 1 YPTS_2063 IPR000352 Peptide chain release factor class I YPTS_2064 IPR025714 Methyltransferase domain YPTS_2064 IPR004556 Methyltransferase HemK-like YPTS_2064 IPR040758 Release factor glutamine methyltransferase, N-terminal domain YPTS_2064 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_2064 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2064 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPTS_2065 IPR007360 Invasion gene expression up-regulator, SirB YPTS_2066 IPR032698 Protein SirB1, N-terminal YPTS_2067 IPR013785 Aldolase-type TIM barrel YPTS_2067 IPR006218 DAHP synthetase I/KDSA YPTS_2067 IPR006269 3-deoxy-8-phosphooctulonate synthase YPTS_2068 IPR018045 Sulphate anion transporter, conserved site YPTS_2068 IPR011547 SLC26A/SulP transporter domain YPTS_2068 IPR001902 SLC26A/SulP transporter YPTS_2068 IPR002645 STAS domain YPTS_2068 IPR036513 STAS domain superfamily YPTS_2070 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTS_2070 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTS_2072 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2072 IPR035906 MetI-like superfamily YPTS_2073 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2073 IPR035906 MetI-like superfamily YPTS_2074 IPR003593 AAA+ ATPase domain YPTS_2074 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTS_2074 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2074 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2074 IPR003439 ABC transporter-like YPTS_2074 IPR017871 ABC transporter, conserved site YPTS_2074 IPR013611 Transport-associated OB, type 2 YPTS_2074 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTS_2075 IPR030395 Glycerophosphodiester phosphodiesterase domain YPTS_2075 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPTS_2076 IPR022687 DTXR-type HTH domain YPTS_2076 IPR000600 ROK family YPTS_2076 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2076 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2077 IPR004013 PHP domain YPTS_2077 IPR016195 Polymerase/histidinol phosphatase-like YPTS_2077 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTS_2077 IPR023710 Probable phosphatase YcdX YPTS_2078 IPR036411 TorD-like superfamily YPTS_2078 IPR020945 DMSO/Nitrate reductase chaperone YPTS_2078 IPR026269 Tat proofreading chaperone DmsD-type YPTS_2079 IPR010835 Protein of unknown function DUF1439 YPTS_2080 IPR020846 Major facilitator superfamily domain YPTS_2080 IPR036259 MFS transporter superfamily YPTS_2080 IPR022855 Multidrug resistance protein MdtH YPTS_2080 IPR011701 Major facilitator superfamily YPTS_2081 IPR000182 GNAT domain YPTS_2081 IPR016181 Acyl-CoA N-acyltransferase YPTS_2082 IPR007432 Protein of unknown function DUF480 YPTS_2082 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2082 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2083 IPR036291 NAD(P)-binding domain superfamily YPTS_2083 IPR000683 Oxidoreductase, N-terminal YPTS_2084 IPR004268 Peptidoglycan biosynthesis protein MurJ YPTS_2085 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_2085 IPR035251 ShlB, POTRA domain YPTS_2085 IPR034746 POTRA domain YPTS_2085 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_2085 IPR027282 Two partner secretion pathway transporter YPTS_2088 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPTS_2088 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily YPTS_2088 IPR005148 Arginyl tRNA synthetase N-terminal domain YPTS_2088 IPR001278 Arginine-tRNA ligase YPTS_2088 IPR035684 Arginyl-tRNA synthetase, catalytic core domain YPTS_2088 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2088 IPR008909 DALR anticodon binding YPTS_2088 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_2089 IPR010393 Protein of unknown function DUF991 YPTS_2089 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTS_2090 IPR023648 Copper homeostasis CutC domain YPTS_2090 IPR005627 Copper homeostasis protein CutC YPTS_2090 IPR036822 Copper homeostasis (CutC) domain superfamily YPTS_2091 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2091 IPR010017 tRNA U34 carboxymethyltransferase YPTS_2091 IPR027555 tRNA (mo5U34)-methyltransferase-like YPTS_2092 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2092 IPR041698 Methyltransferase domain 25 YPTS_2092 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPTS_2093 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPTS_2093 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YPTS_2094 IPR036520 UPF0759 superfamily YPTS_2094 IPR002763 Protein of unknown function DUF72 YPTS_2095 IPR004524 Aspartate-tRNA ligase, type 1 YPTS_2095 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPTS_2095 IPR004115 GAD-like domain superfamily YPTS_2095 IPR029351 GAD domain YPTS_2095 IPR012340 Nucleic acid-binding, OB-fold YPTS_2095 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTS_2095 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTS_2095 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_2096 IPR003564 Dihydroneopterin triphosphate diphosphatase YPTS_2096 IPR000086 NUDIX hydrolase domain YPTS_2096 IPR020084 NUDIX hydrolase, conserved site YPTS_2096 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_2097 IPR017856 Integrase-like, N-terminal YPTS_2097 IPR029072 YebC-like YPTS_2097 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPTS_2097 IPR002876 Transcriptional regulator TACO1-like YPTS_2098 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPTS_2098 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPTS_2098 IPR036397 Ribonuclease H superfamily YPTS_2098 IPR012337 Ribonuclease H-like superfamily YPTS_2099 IPR011114 Holliday junction DNA helicase RuvA, C-terminal YPTS_2099 IPR000085 Bacterial DNA recombination protein RuvA YPTS_2099 IPR010994 RuvA domain 2-like YPTS_2099 IPR036267 RuvA, C-terminal domain superfamily YPTS_2099 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTS_2099 IPR012340 Nucleic acid-binding, OB-fold YPTS_2099 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPTS_2100 IPR008823 RuvB C-terminal winged helix domain YPTS_2100 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2100 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2100 IPR004605 DNA helicase, Holliday junction RuvB-type YPTS_2100 IPR008824 RuvB-like P-loop domain YPTS_2100 IPR003593 AAA+ ATPase domain YPTS_2100 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2100 IPR041445 RuvB, AAA lid domain YPTS_2101 IPR037294 ABC transporter, BtuC-like YPTS_2101 IPR001626 ABC transporter, TroCD-like YPTS_2102 IPR003593 AAA+ ATPase domain YPTS_2102 IPR003439 ABC transporter-like YPTS_2102 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2102 IPR017882 Zinc import ATP-binding protein ZnuC YPTS_2103 IPR035520 High-affinity zinc uptake system protein ZnuA YPTS_2103 IPR006127 Periplasmic solute binding protein, ZnuA-like YPTS_2104 IPR016047 Peptidase M23 YPTS_2104 IPR013731 Opacity-associated protein A, N-terminal YPTS_2104 IPR018392 LysM domain YPTS_2104 IPR011055 Duplicated hybrid motif YPTS_2105 IPR011921 Lipid A biosynthesis myristoyltransferase YPTS_2105 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTS_2107 IPR001697 Pyruvate kinase YPTS_2107 IPR015806 Pyruvate kinase, insert domain superfamily YPTS_2107 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_2107 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPTS_2107 IPR015795 Pyruvate kinase, C-terminal YPTS_2107 IPR015793 Pyruvate kinase, barrel YPTS_2107 IPR018209 Pyruvate kinase, active site YPTS_2107 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTS_2107 IPR040442 Pyruvate kinase-like domain superfamily YPTS_2108 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2108 IPR035472 RpiR-like, SIS domain YPTS_2108 IPR001347 Sugar isomerase (SIS) YPTS_2108 IPR000281 Helix-turn-helix protein RpiR YPTS_2108 IPR009057 Homeobox-like domain superfamily YPTS_2109 IPR036291 NAD(P)-binding domain superfamily YPTS_2109 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPTS_2109 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPTS_2109 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPTS_2109 IPR001282 Glucose-6-phosphate dehydrogenase YPTS_2111 IPR031338 KDPG/KHG aldolase, active site 2 YPTS_2111 IPR000887 KDPG/KHG aldolase YPTS_2111 IPR031337 KDPG/KHG aldolase, active site 1 YPTS_2111 IPR013785 Aldolase-type TIM barrel YPTS_2112 IPR000390 Small multidrug resistance protein family YPTS_2112 IPR023740 Spermidine export protein MdtJ YPTS_2113 IPR023737 Spermidine export protein MdtI YPTS_2113 IPR000390 Small multidrug resistance protein family YPTS_2114 IPR019897 RidA, conserved site YPTS_2114 IPR035709 RutC family, YoaB-like YPTS_2114 IPR006175 YjgF/YER057c/UK114 family YPTS_2114 IPR035959 RutC-like superfamily YPTS_2115 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2115 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_2115 IPR006935 Helicase/UvrB, N-terminal YPTS_2115 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPTS_2115 IPR006555 ATP-dependent helicase, C-terminal YPTS_2116 IPR000905 Gcp-like domain YPTS_2116 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB YPTS_2117 IPR004658 Outer membrane lipoprotein Slp YPTS_2118 IPR020845 AMP-binding, conserved site YPTS_2118 IPR000873 AMP-dependent synthetase/ligase YPTS_2118 IPR042099 AMP-dependent synthetase-like superfamily YPTS_2118 IPR025110 AMP-binding enzyme, C-terminal domain YPTS_2119 IPR002562 3'-5' exonuclease domain YPTS_2119 IPR002121 HRDC domain YPTS_2119 IPR036397 Ribonuclease H superfamily YPTS_2119 IPR012337 Ribonuclease H-like superfamily YPTS_2119 IPR006292 Ribonuclease D YPTS_2119 IPR010997 HRDC-like superfamily YPTS_2120 IPR036707 Cell division topological specificity factor MinE superfamily YPTS_2120 IPR005527 Cell division topological specificity factor MinE YPTS_2121 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2121 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPTS_2121 IPR010223 ATP binding protein MinD, bacterial-type YPTS_2121 IPR025501 ATP binding protein MinD YPTS_2122 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily YPTS_2122 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPTS_2122 IPR013033 Septum formation inhibitor MinC YPTS_2122 IPR007874 Septum formation inhibitor MinC, N-terminal YPTS_2122 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily YPTS_2122 IPR005526 Septum formation inhibitor MinC, C-terminal YPTS_2123 IPR038068 YcgL-like superfamily YPTS_2123 IPR027354 YcgL domain YPTS_2124 IPR031304 Transglycosylase SLT domain 2 YPTS_2124 IPR011757 Lytic transglycosylase MltB YPTS_2124 IPR023346 Lysozyme-like domain superfamily YPTS_2125 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPTS_2125 IPR011234 Fumarylacetoacetase-like, C-terminal YPTS_2126 IPR005358 Putative zinc- or iron-chelating domain containing protein YPTS_2126 IPR008228 Uncharacterised conserved protein UCP006173 YPTS_2128 IPR010240 Cysteine desulfurase IscS YPTS_2128 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2128 IPR000192 Aminotransferase class V domain YPTS_2128 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_2128 IPR016454 Cysteine desulfurase YPTS_2128 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2128 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2132 IPR003752 Disulphide bond formation protein DsbB/BdbC YPTS_2132 IPR022920 Disulphide bond formation protein DsbB YPTS_2132 IPR023380 DsbB-like superfamily YPTS_2133 IPR004671 Na+/H+ antiporter NhaB YPTS_2134 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2134 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2134 IPR000524 Transcription regulator HTH, GntR YPTS_2134 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTS_2134 IPR014178 Fatty acid response transcription factor FadR YPTS_2134 IPR028374 FadR, C-terminal domain YPTS_2135 IPR007390 Sporulation stage V, protein R YPTS_2136 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_2136 IPR006076 FAD dependent oxidoreductase YPTS_2136 IPR023080 D-amino acid dehydrogenase DadA YPTS_2137 IPR011701 Major facilitator superfamily YPTS_2137 IPR020846 Major facilitator superfamily domain YPTS_2137 IPR036259 MFS transporter superfamily YPTS_2137 IPR023697 Multidrug resistance protein MdtL YPTS_2138 IPR012093 Pirin YPTS_2138 IPR008778 Pirin, C-terminal domain YPTS_2138 IPR003829 Pirin, N-terminal domain YPTS_2138 IPR011051 RmlC-like cupin domain superfamily YPTS_2138 IPR014710 RmlC-like jelly roll fold YPTS_2139 IPR000847 Transcription regulator HTH, LysR YPTS_2139 IPR005119 LysR, substrate-binding YPTS_2139 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2139 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2141 IPR006698 Uncharacterised protein family UPF0229 YPTS_2143 IPR013153 PrkA AAA domain YPTS_2143 IPR016230 Serine-protein kinase, PrkA YPTS_2143 IPR010650 PrkA C-terminal domain YPTS_2143 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2144 IPR010583 MltA-interacting MipA YPTS_2145 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPTS_2145 IPR025532 Glucose-6-phosphate 1-epimerase YPTS_2145 IPR011013 Galactose mutarotase-like domain superfamily YPTS_2145 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTS_2146 IPR036291 NAD(P)-binding domain superfamily YPTS_2146 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPTS_2146 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPTS_2146 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPTS_2146 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPTS_2146 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPTS_2147 IPR011057 Mss4-like superfamily YPTS_2147 IPR002579 Peptide methionine sulphoxide reductase MrsB YPTS_2147 IPR028427 Peptide methionine sulfoxide reductase YPTS_2148 IPR009749 Protein of unknown function DUF1315 YPTS_2149 IPR036380 Isochorismatase-like superfamily YPTS_2149 IPR000868 Isochorismatase-like YPTS_2150 IPR040919 Asparaginase/glutaminase, C-terminal YPTS_2150 IPR027475 Asparaginase/glutaminase, active site 2 YPTS_2150 IPR020827 Asparaginase/glutaminase, active site 1 YPTS_2150 IPR006033 Type I L-asparaginase family YPTS_2150 IPR027473 L-asparaginase, C-terminal YPTS_2150 IPR041725 Type I (cytosolic) L-asparaginase YPTS_2150 IPR027474 L-asparaginase, N-terminal YPTS_2150 IPR037152 L-asparaginase, N-terminal domain superfamily YPTS_2150 IPR006034 Asparaginase/glutaminase-like YPTS_2150 IPR036152 Asparaginase/glutaminase-like superfamily YPTS_2151 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2151 IPR004634 Peptidase S49, protease IV YPTS_2151 IPR004635 Peptidase S49, SppA YPTS_2151 IPR002142 Peptidase S49 YPTS_2151 IPR033854 Signal peptide peptidase A YPTS_2152 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPTS_2152 IPR000415 Nitroreductase-like YPTS_2152 IPR029479 Nitroreductase YPTS_2153 IPR016188 PurM-like, N-terminal domain YPTS_2153 IPR036921 PurM-like, N-terminal domain superfamily YPTS_2153 IPR023061 Selenophosphate synthetase, class I YPTS_2153 IPR010918 PurM-like, C-terminal domain YPTS_2153 IPR004536 Selenophosphate synthetase YPTS_2153 IPR036676 PurM-like, C-terminal domain superfamily YPTS_2155 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTS_2155 IPR003601 DNA topoisomerase, type IA, domain 2 YPTS_2155 IPR000380 DNA topoisomerase, type IA YPTS_2155 IPR023406 DNA topoisomerase, type IA, active site YPTS_2155 IPR013497 DNA topoisomerase, type IA, central YPTS_2155 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTS_2155 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPTS_2155 IPR023405 DNA topoisomerase, type IA, core domain YPTS_2155 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPTS_2155 IPR034144 DNA topoisomerase 3-like, TOPRIM domain YPTS_2155 IPR006171 TOPRIM domain YPTS_2155 IPR005738 DNA topoisomerase III YPTS_2156 IPR009971 Protein of unknown function DUF1496 YPTS_2157 IPR020084 NUDIX hydrolase, conserved site YPTS_2157 IPR000086 NUDIX hydrolase domain YPTS_2157 IPR020476 NUDIX hydrolase YPTS_2157 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_2158 IPR020848 AP endonuclease 1, conserved site YPTS_2158 IPR005135 Endonuclease/exonuclease/phosphatase YPTS_2158 IPR037493 Exodeoxyribonuclease III-like YPTS_2158 IPR004808 AP endonuclease 1 YPTS_2158 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPTS_2158 IPR020847 AP endonuclease 1, binding site YPTS_2160 IPR005119 LysR, substrate-binding YPTS_2160 IPR000847 Transcription regulator HTH, LysR YPTS_2160 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2160 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2163 IPR036477 Formyl transferase, N-terminal domain superfamily YPTS_2163 IPR002912 ACT domain YPTS_2163 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain YPTS_2163 IPR004810 Formyltetrahydrofolate deformylase YPTS_2163 IPR002376 Formyl transferase, N-terminal YPTS_2164 IPR023006 Uncharacterised protein family UPF0225 YPTS_2164 IPR004027 SEC-C motif YPTS_2164 IPR032710 NTF2-like domain superfamily YPTS_2165 IPR011006 CheY-like superfamily YPTS_2165 IPR036457 PPM-type phosphatase domain superfamily YPTS_2165 IPR028616 Regulator of RpoS YPTS_2165 IPR001789 Signal transduction response regulator, receiver domain YPTS_2165 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2166 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPTS_2166 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPTS_2166 IPR036291 NAD(P)-binding domain superfamily YPTS_2166 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPTS_2166 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPTS_2166 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPTS_2166 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPTS_2166 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_2169 IPR027454 Histone-like protein H-NS, N-terminal YPTS_2169 IPR001801 Histone-like protein H-NS YPTS_2169 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily YPTS_2169 IPR027444 Histone-like protein H-NS, C-terminal domain YPTS_2170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2170 IPR001267 Thymidine kinase YPTS_2170 IPR020633 Thymidine kinase, conserved site YPTS_2171 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTS_2171 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain YPTS_2171 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPTS_2171 IPR015590 Aldehyde dehydrogenase domain YPTS_2171 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_2171 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_2171 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_2171 IPR039697 Iron-type alcohol dehydrogenase-like YPTS_2171 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTS_2172 IPR002771 Multiple antibiotic resistance (MarC)-related YPTS_2173 IPR000914 Solute-binding protein family 5 domain YPTS_2173 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_2173 IPR039424 Solute-binding protein family 5 YPTS_2173 IPR023765 Solute-binding protein family 5, conserved site YPTS_2174 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2174 IPR035906 MetI-like superfamily YPTS_2175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2175 IPR035906 MetI-like superfamily YPTS_2175 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_2176 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2176 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_2176 IPR003439 ABC transporter-like YPTS_2176 IPR017871 ABC transporter, conserved site YPTS_2176 IPR003593 AAA+ ATPase domain YPTS_2177 IPR003593 AAA+ ATPase domain YPTS_2177 IPR017871 ABC transporter, conserved site YPTS_2177 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_2177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2177 IPR003439 ABC transporter-like YPTS_2179 IPR036763 Putative dsDNA mimic superfamily YPTS_2179 IPR007376 dsDNA mimic, putative YPTS_2180 IPR025202 Phospholipase D-like domain YPTS_2180 IPR027379 Cardiolipin synthase N-terminal YPTS_2180 IPR030840 Cardiolipin synthase A YPTS_2180 IPR022924 Cardiolipin synthase YPTS_2180 IPR001736 Phospholipase D/Transphosphatidylase YPTS_2182 IPR000758 Virulence-related outer membrane protein YPTS_2182 IPR027385 Outer membrane protein beta-barrel domain YPTS_2182 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_2186 IPR011008 Dimeric alpha-beta barrel YPTS_2186 IPR005545 YCII-related YPTS_2188 IPR037682 TonB, C-terminal YPTS_2188 IPR006260 TonB/TolA, C-terminal YPTS_2188 IPR003538 Gram-negative bacterial TonB protein YPTS_2189 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase YPTS_2189 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain YPTS_2189 IPR029069 HotDog domain superfamily YPTS_2189 IPR006683 Thioesterase domain YPTS_2190 IPR006008 Intracellular septation protein A YPTS_2193 IPR009627 Uncharacterised protein family UPF0259 YPTS_2194 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_2194 IPR005618 Outer membrane protein, OmpW YPTS_2196 IPR013785 Aldolase-type TIM barrel YPTS_2196 IPR018204 Tryptophan synthase, alpha chain, active site YPTS_2196 IPR002028 Tryptophan synthase, alpha chain YPTS_2196 IPR011060 Ribulose-phosphate binding barrel YPTS_2197 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_2197 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_2197 IPR006653 Tryptophan synthase, beta chain, conserved site YPTS_2197 IPR006654 Tryptophan synthase, beta chain YPTS_2197 IPR023026 Tryptophan synthase beta chain/beta chain-like YPTS_2198 IPR013785 Aldolase-type TIM barrel YPTS_2198 IPR013798 Indole-3-glycerol phosphate synthase YPTS_2198 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPTS_2198 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) YPTS_2198 IPR011060 Ribulose-phosphate binding barrel YPTS_2199 IPR000312 Glycosyl transferase, family 3 YPTS_2199 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTS_2199 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTS_2199 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTS_2199 IPR005940 Anthranilate phosphoribosyl transferase YPTS_2200 IPR029062 Class I glutamine amidotransferase-like YPTS_2200 IPR017926 Glutamine amidotransferase YPTS_2200 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPTS_2201 IPR015890 Chorismate-utilising enzyme, C-terminal YPTS_2201 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPTS_2201 IPR006805 Anthranilate synthase component I, N-terminal YPTS_2201 IPR019999 Anthranilate synthase component I-like YPTS_2201 IPR005801 ADC synthase YPTS_2202 IPR016195 Polymerase/histidinol phosphatase-like YPTS_2202 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTS_2202 IPR004013 PHP domain YPTS_2203 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTS_2203 IPR006070 YrdC-like domain YPTS_2204 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_2204 IPR036986 RNA-binding S4 domain superfamily YPTS_2204 IPR002942 RNA-binding S4 domain YPTS_2204 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTS_2204 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTS_2204 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_2205 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPTS_2205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2206 IPR036291 NAD(P)-binding domain superfamily YPTS_2206 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2206 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2207 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2207 IPR013703 Peptidase S49, N-terminal proteobacteria YPTS_2207 IPR002142 Peptidase S49 YPTS_2208 IPR019633 Protein of unknown function DUF2498 YPTS_2208 IPR038191 YciN superfamily YPTS_2210 IPR005733 DNA topoisomerase I, bacterial-type YPTS_2210 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPTS_2210 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPTS_2210 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPTS_2210 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPTS_2210 IPR013497 DNA topoisomerase, type IA, central YPTS_2210 IPR023406 DNA topoisomerase, type IA, active site YPTS_2210 IPR034149 DNA topoisomerase 1, TOPRIM domain YPTS_2210 IPR003601 DNA topoisomerase, type IA, domain 2 YPTS_2210 IPR028612 DNA topoisomerase I, type IA YPTS_2210 IPR023405 DNA topoisomerase, type IA, core domain YPTS_2210 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPTS_2210 IPR013498 DNA topoisomerase, type IA, zn finger YPTS_2210 IPR000380 DNA topoisomerase, type IA YPTS_2210 IPR006171 TOPRIM domain YPTS_2211 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2211 IPR005119 LysR, substrate-binding YPTS_2211 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2211 IPR000847 Transcription regulator HTH, LysR YPTS_2213 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPTS_2213 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPTS_2213 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPTS_2213 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPTS_2213 IPR006249 Aconitase/Iron-responsive element-binding protein 2 YPTS_2213 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPTS_2213 IPR036008 Aconitase, iron-sulfur domain YPTS_2214 IPR000926 GTP cyclohydrolase II, RibA YPTS_2214 IPR036144 RibA-like superfamily YPTS_2214 IPR032677 GTP cyclohydrolase II YPTS_2215 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPTS_2215 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPTS_2216 IPR010445 Lipopolysaccharide assembly protein A domain YPTS_2216 IPR032906 Lipopolysaccharide assembly protein A YPTS_2217 IPR013026 Tetratricopeptide repeat-containing domain YPTS_2217 IPR030865 Lipopolysaccharide assembly protein B YPTS_2217 IPR019734 Tetratricopeptide repeat YPTS_2217 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_2217 IPR041166 LapB, rubredoxin metal binding domain YPTS_2219 IPR011060 Ribulose-phosphate binding barrel YPTS_2219 IPR014732 Orotidine 5'-phosphate decarboxylase YPTS_2219 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPTS_2219 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPTS_2219 IPR013785 Aldolase-type TIM barrel YPTS_2220 IPR001950 SUI1 domain YPTS_2220 IPR036877 SUI1 domain superfamily YPTS_2220 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPTS_2221 IPR008816 Glycine zipper 2TM domain YPTS_2222 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPTS_2222 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPTS_2222 IPR004661 L-ribulose-5-phosphate 4-epimerase YPTS_2222 IPR001303 Class II aldolase/adducin N-terminal YPTS_2224 IPR013785 Aldolase-type TIM barrel YPTS_2224 IPR023001 Fructose-6-phosphate aldolase YPTS_2224 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPTS_2224 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase YPTS_2224 IPR018225 Transaldolase, active site YPTS_2224 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial YPTS_2225 IPR007423 Selenoprotein, putative YPTS_2226 IPR025299 CstA, C-terminal domain YPTS_2226 IPR003706 CstA, N-terminal domain YPTS_2227 IPR011804 Ribonuclease II YPTS_2227 IPR040476 RNase II/RNase R, cold shock domain YPTS_2227 IPR011129 Cold shock domain YPTS_2227 IPR003029 S1 domain YPTS_2227 IPR012340 Nucleic acid-binding, OB-fold YPTS_2227 IPR013223 Ribonuclease B, N-terminal OB domain YPTS_2227 IPR001900 Ribonuclease II/R YPTS_2227 IPR022966 Ribonuclease II/R, conserved site YPTS_2227 IPR004476 Ribonuclease II/ribonuclease R YPTS_2228 IPR036259 MFS transporter superfamily YPTS_2228 IPR020846 Major facilitator superfamily domain YPTS_2228 IPR011701 Major facilitator superfamily YPTS_2229 IPR036291 NAD(P)-binding domain superfamily YPTS_2229 IPR001509 NAD-dependent epimerase/dehydratase YPTS_2230 IPR004036 Endonuclease III-like, conserved site-2 YPTS_2230 IPR005759 Endonuclease III YPTS_2230 IPR011257 DNA glycosylase YPTS_2230 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTS_2230 IPR000445 Helix-hairpin-helix motif YPTS_2230 IPR003265 HhH-GPD domain YPTS_2230 IPR004035 Endonuclease III, iron-sulphur binding site YPTS_2230 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPTS_2231 IPR003667 NqrDE/RnfAE YPTS_2231 IPR010968 Ion-translocating oxidoreductase complex subunit E YPTS_2232 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG YPTS_2232 IPR007329 FMN-binding YPTS_2233 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPTS_2233 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D YPTS_2234 IPR009057 Homeobox-like domain superfamily YPTS_2234 IPR018060 DNA binding HTH domain, AraC-type YPTS_2234 IPR018062 HTH domain AraC-type, conserved site YPTS_2234 IPR011256 Regulatory factor, effector binding domain superfamily YPTS_2234 IPR020449 Transcription regulator HTH, AraC- type YPTS_2234 IPR010499 Bacterial transcription activator, effector binding YPTS_2234 IPR029442 GyrI-like small molecule binding domain YPTS_2235 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC YPTS_2235 IPR026902 RnfC Barrel sandwich hybrid domain YPTS_2235 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPTS_2235 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPTS_2235 IPR009051 Alpha-helical ferredoxin YPTS_2235 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2235 IPR019554 Soluble ligand binding domain YPTS_2236 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria YPTS_2236 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB YPTS_2236 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2236 IPR007202 4Fe-4S domain YPTS_2236 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2236 IPR011005 Dihydropteroate synthase-like YPTS_2237 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA YPTS_2237 IPR003667 NqrDE/RnfAE YPTS_2238 IPR019690 Protein of unknown function DUF2569 YPTS_2239 IPR039395 Peptidase C39-like A YPTS_2239 IPR039421 Type I protein exporter YPTS_2239 IPR011527 ABC transporter type 1, transmembrane domain YPTS_2239 IPR005074 Peptidase C39, bacteriocin processing YPTS_2239 IPR003593 AAA+ ATPase domain YPTS_2239 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2239 IPR010132 ATPase, type I secretion system, HlyB YPTS_2239 IPR017871 ABC transporter, conserved site YPTS_2239 IPR003439 ABC transporter-like YPTS_2239 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_2240 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTS_2240 IPR006144 Secretion protein HlyD, conserved site YPTS_2240 IPR010129 Type I secretion membrane fusion protein, HlyD family YPTS_2241 IPR003439 ABC transporter-like YPTS_2241 IPR010132 ATPase, type I secretion system, HlyB YPTS_2241 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2241 IPR005074 Peptidase C39, bacteriocin processing YPTS_2241 IPR017871 ABC transporter, conserved site YPTS_2241 IPR039395 Peptidase C39-like A YPTS_2241 IPR003593 AAA+ ATPase domain YPTS_2241 IPR011527 ABC transporter type 1, transmembrane domain YPTS_2241 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_2241 IPR039421 Type I protein exporter YPTS_2242 IPR003762 L-arabinose isomerase YPTS_2242 IPR038583 L-arabinose isomerase, N-terminal domain superfamily YPTS_2242 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily YPTS_2242 IPR024664 L-arabinose isomerase, C-terminal YPTS_2242 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPTS_2243 IPR005929 Ribulokinase YPTS_2243 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_2244 IPR028082 Periplasmic binding protein-like I YPTS_2244 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_2244 IPR026266 L-arabinose-binding periplasmic protein YPTS_2245 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG YPTS_2245 IPR003593 AAA+ ATPase domain YPTS_2245 IPR003439 ABC transporter-like YPTS_2245 IPR017871 ABC transporter, conserved site YPTS_2245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2246 IPR001851 ABC transporter, permease YPTS_2247 IPR018060 DNA binding HTH domain, AraC-type YPTS_2247 IPR018062 HTH domain AraC-type, conserved site YPTS_2247 IPR009057 Homeobox-like domain superfamily YPTS_2247 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTS_2247 IPR037923 Transcription regulator HTH-like YPTS_2247 IPR020449 Transcription regulator HTH, AraC- type YPTS_2248 IPR036291 NAD(P)-binding domain superfamily YPTS_2248 IPR004104 Oxidoreductase, C-terminal YPTS_2248 IPR000683 Oxidoreductase, N-terminal YPTS_2249 IPR038770 Sodium/solute symporter superfamily YPTS_2249 IPR016833 Putative sodium bile acid cotransporter YPTS_2250 IPR032466 Metal-dependent hydrolase YPTS_2250 IPR006330 Adenosine/adenine deaminase YPTS_2250 IPR028893 Adenosine deaminase YPTS_2250 IPR001365 Adenosine/AMP deaminase domain YPTS_2250 IPR006650 Adenosine/AMP deaminase active site YPTS_2253 IPR003352 Phosphotransferase system, EIIC YPTS_2253 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTS_2253 IPR036878 Glucose permease domain IIB YPTS_2253 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTS_2253 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPTS_2253 IPR011055 Duplicated hybrid motif YPTS_2253 IPR001996 Phosphotransferase system, IIB component, type 1 YPTS_2253 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPTS_2255 IPR010352 Protein of unknown function DUF945 YPTS_2256 IPR018050 Phosphomannose isomerase, type I, conserved site YPTS_2256 IPR016305 Mannose-6-phosphate isomerase YPTS_2256 IPR001250 Mannose-6-phosphate isomerase, type I YPTS_2256 IPR011051 RmlC-like cupin domain superfamily YPTS_2256 IPR014710 RmlC-like jelly roll fold YPTS_2257 IPR018951 Fumarase C, C-terminal YPTS_2257 IPR020557 Fumarate lyase, conserved site YPTS_2257 IPR000362 Fumarate lyase family YPTS_2257 IPR005677 Fumarate hydratase, class II YPTS_2257 IPR024083 Fumarase/histidase, N-terminal YPTS_2257 IPR008948 L-Aspartase-like YPTS_2257 IPR022761 Fumarate lyase, N-terminal YPTS_2258 IPR036384 Replication terminator Tus superfamily YPTS_2258 IPR036381 Replication terminator Tus, domain 1 YPTS_2258 IPR008865 DNA replication terminus site-binding protein YPTS_2259 IPR020846 Major facilitator superfamily domain YPTS_2259 IPR005829 Sugar transporter, conserved site YPTS_2259 IPR036259 MFS transporter superfamily YPTS_2259 IPR011701 Major facilitator superfamily YPTS_2260 IPR000847 Transcription regulator HTH, LysR YPTS_2260 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2260 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2260 IPR005119 LysR, substrate-binding YPTS_2261 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2261 IPR000600 ROK family YPTS_2261 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2262 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2262 IPR004472 Dethiobiotin synthase BioD YPTS_2263 IPR001807 Chloride channel, voltage gated YPTS_2263 IPR014743 Chloride channel, core YPTS_2263 IPR023790 Chloride channel, voltage-gated, ClcB YPTS_2264 IPR010595 Protein of unknown function DUF1161 YPTS_2265 IPR009700 Protein of unknown function DUF1283 YPTS_2266 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2266 IPR036291 NAD(P)-binding domain superfamily YPTS_2266 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2267 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2267 IPR002197 DNA binding HTH domain, Fis-type YPTS_2267 IPR009057 Homeobox-like domain superfamily YPTS_2267 IPR029016 GAF-like domain superfamily YPTS_2267 IPR003018 GAF domain YPTS_2267 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_2267 IPR003593 AAA+ ATPase domain YPTS_2267 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_2267 IPR025944 Sigma-54 interaction domain, conserved site YPTS_2267 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_2268 IPR009700 Protein of unknown function DUF1283 YPTS_2269 IPR036291 NAD(P)-binding domain superfamily YPTS_2269 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2269 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2270 IPR009057 Homeobox-like domain superfamily YPTS_2270 IPR003593 AAA+ ATPase domain YPTS_2270 IPR003018 GAF domain YPTS_2270 IPR029016 GAF-like domain superfamily YPTS_2270 IPR002197 DNA binding HTH domain, Fis-type YPTS_2270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_2270 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_2270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_2270 IPR025944 Sigma-54 interaction domain, conserved site YPTS_2270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2271 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_2271 IPR015590 Aldehyde dehydrogenase domain YPTS_2271 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_2271 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_2271 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_2271 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_2273 IPR000620 EamA domain YPTS_2276 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2276 IPR004839 Aminotransferase, class I/classII YPTS_2276 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2276 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2276 IPR027619 Putative C-S lyase YPTS_2277 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal YPTS_2277 IPR004770 Na+/H+ antiporter NhaC YPTS_2279 IPR000843 LacI-type HTH domain YPTS_2279 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2279 IPR028082 Periplasmic binding protein-like I YPTS_2281 IPR025997 Periplasmic binding protein YPTS_2281 IPR028082 Periplasmic binding protein-like I YPTS_2282 IPR001851 ABC transporter, permease YPTS_2283 IPR015861 ABC transporter, ribose import, RbsA YPTS_2283 IPR017871 ABC transporter, conserved site YPTS_2283 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2283 IPR003439 ABC transporter-like YPTS_2283 IPR003593 AAA+ ATPase domain YPTS_2286 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_2286 IPR010067 Aliphatic sulfonates-binding protein YPTS_2286 IPR015168 SsuA/THI5-like YPTS_2287 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2287 IPR035906 MetI-like superfamily YPTS_2288 IPR003593 AAA+ ATPase domain YPTS_2288 IPR003439 ABC transporter-like YPTS_2288 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2289 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily YPTS_2289 IPR011271 AMP nucleosidase YPTS_2289 IPR018953 AMP nucleoside phosphorylase, N-terminal YPTS_2289 IPR000845 Nucleoside phosphorylase domain YPTS_2289 IPR035994 Nucleoside phosphorylase superfamily YPTS_2294 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_2294 IPR000399 TPP-binding enzyme, conserved site YPTS_2294 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPTS_2294 IPR012000 Thiamine pyrophosphate enzyme, central domain YPTS_2294 IPR029061 Thiamin diphosphate-binding fold YPTS_2294 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_2294 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPTS_2294 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_2295 IPR002912 ACT domain YPTS_2295 IPR039557 AHAS, ACT domain YPTS_2295 IPR004789 Acetolactate synthase, small subunit YPTS_2296 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_2296 IPR023214 HAD superfamily YPTS_2296 IPR036412 HAD-like superfamily YPTS_2296 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_2296 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPTS_2296 IPR006439 HAD hydrolase, subfamily IA YPTS_2298 IPR001952 Alkaline phosphatase YPTS_2298 IPR018299 Alkaline phosphatase, active site YPTS_2298 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_2299 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2299 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPTS_2299 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPTS_2299 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPTS_2299 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPTS_2299 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPTS_2299 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPTS_2300 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2300 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2300 IPR018490 Cyclic nucleotide-binding-like YPTS_2300 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPTS_2300 IPR014710 RmlC-like jelly roll fold YPTS_2300 IPR000595 Cyclic nucleotide-binding domain YPTS_2300 IPR012318 Crp-type HTH domain YPTS_2301 IPR006016 UspA YPTS_2302 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_2302 IPR034300 NADP transhydrogenase beta-like domain YPTS_2302 IPR012136 NADP transhydrogenase, beta subunit YPTS_2303 IPR026255 NAD(P) transhydrogenase, alpha subunit YPTS_2303 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPTS_2303 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPTS_2303 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPTS_2303 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPTS_2303 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPTS_2303 IPR036291 NAD(P)-binding domain superfamily YPTS_2304 IPR025543 Dodecin-like YPTS_2304 IPR036275 YdgH-like superfamily YPTS_2304 IPR010854 Domain of unknown function DUF1471 YPTS_2304 IPR025539 YdgH protein YPTS_2305 IPR002293 Amino acid/polyamine transporter I YPTS_2305 IPR004754 Amino acid antiporter YPTS_2307 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2307 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2307 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2307 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2307 IPR001789 Signal transduction response regulator, receiver domain YPTS_2307 IPR011006 CheY-like superfamily YPTS_2308 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2308 IPR003660 HAMP domain YPTS_2308 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2308 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2308 IPR005467 Histidine kinase domain YPTS_2308 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2308 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2309 IPR001333 Peptidase M32, carboxypeptidase Taq YPTS_2310 IPR041508 Toxin complex C-like repeat YPTS_2310 IPR025968 YwqJ-like deaminase YPTS_2310 IPR022385 Rhs repeat-associated core YPTS_2311 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPTS_2311 IPR023480 Uncharacterised protein family UPF0312/YceI YPTS_2311 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YPTS_2312 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTS_2312 IPR016174 Di-haem cytochrome, transmembrane YPTS_2314 IPR001254 Serine proteases, trypsin domain YPTS_2314 IPR018114 Serine proteases, trypsin family, histidine active site YPTS_2314 IPR008256 Peptidase S1B YPTS_2314 IPR033116 Serine proteases, trypsin family, serine active site YPTS_2314 IPR009003 Peptidase S1, PA clan YPTS_2317 IPR003593 AAA+ ATPase domain YPTS_2317 IPR007502 Helicase-associated domain YPTS_2317 IPR001650 Helicase, C-terminal YPTS_2317 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_2317 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2317 IPR011545 DEAD/DEAH box helicase domain YPTS_2317 IPR011709 Domain of unknown function DUF1605 YPTS_2317 IPR024590 RNA helicase HrpA, C-terminal YPTS_2317 IPR010222 RNA helicase HrpA YPTS_2318 IPR023048 NADH-azoreductase, FMN-dependent YPTS_2318 IPR003680 Flavodoxin-like fold YPTS_2318 IPR029039 Flavoprotein-like superfamily YPTS_2319 IPR037171 NagB/RpiA transferase-like YPTS_2319 IPR012318 Crp-type HTH domain YPTS_2319 IPR007324 Sugar-binding domain, putative YPTS_2319 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2320 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_2320 IPR013118 Mannitol dehydrogenase, C-terminal YPTS_2320 IPR036291 NAD(P)-binding domain superfamily YPTS_2320 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_2320 IPR013131 Mannitol dehydrogenase, N-terminal YPTS_2320 IPR000669 Mannitol dehydrogenase YPTS_2321 IPR008309 Uncharacterised conserved protein UCP025560 YPTS_2322 IPR025985 YnbE-like lipoprotein YPTS_2323 IPR021730 Dicarboxylate transport YPTS_2324 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_2324 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTS_2324 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_2324 IPR036291 NAD(P)-binding domain superfamily YPTS_2324 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTS_2325 IPR038670 HslJ-like superfamily YPTS_2325 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPTS_2326 IPR005590 Protein of unknown function DUF333 YPTS_2327 IPR003416 MgtC/SapB/SrpB/YhiD family YPTS_2328 IPR000390 Small multidrug resistance protein family YPTS_2329 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPTS_2329 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_2329 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2329 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2329 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPTS_2329 IPR029061 Thiamin diphosphate-binding fold YPTS_2329 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTS_2329 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily YPTS_2329 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPTS_2329 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPTS_2329 IPR011895 Pyruvate-flavodoxin oxidoreductase YPTS_2329 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPTS_2330 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type YPTS_2330 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase YPTS_2330 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTS_2330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2331 IPR029058 Alpha/Beta hydrolase fold YPTS_2331 IPR036514 SGNH hydrolase superfamily YPTS_2331 IPR013830 SGNH hydrolase-type esterase domain YPTS_2331 IPR013094 Alpha/beta hydrolase fold-3 YPTS_2334 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPTS_2334 IPR023714 Zinc transport protein ZntB YPTS_2335 IPR000914 Solute-binding protein family 5 domain YPTS_2335 IPR023765 Solute-binding protein family 5, conserved site YPTS_2335 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_2335 IPR039424 Solute-binding protein family 5 YPTS_2336 IPR000834 Peptidase M14, carboxypeptidase A YPTS_2337 IPR029065 Enolase C-terminal domain-like YPTS_2337 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPTS_2337 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTS_2337 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPTS_2337 IPR029017 Enolase-like, N-terminal YPTS_2337 IPR036849 Enolase-like, C-terminal domain superfamily YPTS_2337 IPR034603 Dipeptide epimerase YPTS_2338 IPR013740 Redoxin YPTS_2338 IPR036249 Thioredoxin-like superfamily YPTS_2338 IPR018219 Thiol peroxidase conserved site YPTS_2338 IPR002065 Thiol peroxidase Tpx YPTS_2338 IPR013766 Thioredoxin domain YPTS_2339 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_2339 IPR025944 Sigma-54 interaction domain, conserved site YPTS_2339 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_2339 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_2339 IPR035965 PAS domain superfamily YPTS_2339 IPR002912 ACT domain YPTS_2339 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2339 IPR000014 PAS domain YPTS_2339 IPR003593 AAA+ ATPase domain YPTS_2339 IPR030828 TyrR family, helix-turn-helix domain YPTS_2339 IPR009057 Homeobox-like domain superfamily YPTS_2342 IPR021147 Protein of unknown function DUF697 YPTS_2342 IPR006507 Uncharacterised protein family UPF0283 YPTS_2343 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPTS_2345 IPR007168 Phage shock protein, PspC, N-terminal YPTS_2345 IPR014320 Phage shock protein, PspC YPTS_2346 IPR009554 Phage shock protein B YPTS_2347 IPR007157 PspA/IM30 YPTS_2347 IPR014319 Phage shock protein, PspA YPTS_2348 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_2348 IPR003593 AAA+ ATPase domain YPTS_2348 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_2348 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2348 IPR025944 Sigma-54 interaction domain, conserved site YPTS_2348 IPR014317 Transcription activator PspF YPTS_2348 IPR002197 DNA binding HTH domain, Fis-type YPTS_2348 IPR009057 Homeobox-like domain superfamily YPTS_2349 IPR039424 Solute-binding protein family 5 YPTS_2349 IPR023765 Solute-binding protein family 5, conserved site YPTS_2349 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_2349 IPR000914 Solute-binding protein family 5 domain YPTS_2350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2350 IPR035906 MetI-like superfamily YPTS_2351 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2351 IPR035906 MetI-like superfamily YPTS_2351 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_2352 IPR003439 ABC transporter-like YPTS_2352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2352 IPR003593 AAA+ ATPase domain YPTS_2352 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_2353 IPR003439 ABC transporter-like YPTS_2353 IPR003593 AAA+ ATPase domain YPTS_2353 IPR017871 ABC transporter, conserved site YPTS_2353 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2354 IPR029032 AhpD-like YPTS_2355 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPTS_2355 IPR000109 Proton-dependent oligopeptide transporter family YPTS_2355 IPR036259 MFS transporter superfamily YPTS_2355 IPR005279 Dipeptide/tripeptide permease YPTS_2355 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPTS_2356 IPR006977 Yip1 domain YPTS_2357 IPR020317 Uncharacterised protein family YjbD YPTS_2358 IPR040079 Glutathione Transferase family YPTS_2358 IPR004045 Glutathione S-transferase, N-terminal YPTS_2358 IPR004046 Glutathione S-transferase, C-terminal YPTS_2358 IPR036249 Thioredoxin-like superfamily YPTS_2358 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTS_2358 IPR010987 Glutathione S-transferase, C-terminal-like YPTS_2359 IPR004625 Pyridoxine kinase YPTS_2359 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPTS_2359 IPR023685 Pyridoxal kinase PdxY YPTS_2359 IPR029056 Ribokinase-like YPTS_2360 IPR002307 Tyrosine-tRNA ligase YPTS_2360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_2360 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPTS_2360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2360 IPR002942 RNA-binding S4 domain YPTS_2360 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPTS_2360 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPTS_2360 IPR036986 RNA-binding S4 domain superfamily YPTS_2361 IPR000659 Pyridoxamine 5'-phosphate oxidase YPTS_2361 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative YPTS_2361 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPTS_2361 IPR012349 FMN-binding split barrel YPTS_2361 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPTS_2362 IPR020471 Aldo/keto reductase YPTS_2362 IPR023210 NADP-dependent oxidoreductase domain YPTS_2362 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_2363 IPR010710 Protein of unknown function DUF1289 YPTS_2364 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_2364 IPR040423 Phosphoethanolamine transferase YPTS_2364 IPR000917 Sulfatase, N-terminal YPTS_2364 IPR012549 Phosphoethanolamine transferase, N-terminal YPTS_2365 IPR009057 Homeobox-like domain superfamily YPTS_2365 IPR011075 Tetracyclin repressor-like, C-terminal domain YPTS_2365 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPTS_2365 IPR001647 DNA-binding HTH domain, TetR-type YPTS_2366 IPR013785 Aldolase-type TIM barrel YPTS_2366 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTS_2367 IPR041508 Toxin complex C-like repeat YPTS_2367 IPR025968 YwqJ-like deaminase YPTS_2367 IPR022385 Rhs repeat-associated core YPTS_2368 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTS_2368 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTS_2368 IPR037523 Vicinal oxygen chelate (VOC) domain YPTS_2368 IPR018146 Glyoxalase I, conserved site YPTS_2368 IPR004361 Glyoxalase I YPTS_2369 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTS_2369 IPR005987 Ribonuclease T YPTS_2369 IPR036397 Ribonuclease H superfamily YPTS_2369 IPR012337 Ribonuclease H-like superfamily YPTS_2370 IPR036249 Thioredoxin-like superfamily YPTS_2370 IPR002109 Glutaredoxin YPTS_2370 IPR033658 Glutaredoxin, PICOT-like YPTS_2370 IPR014434 Monothiol glutaredoxin YPTS_2370 IPR004480 Monothiol glutaredoxin-related YPTS_2372 IPR038765 Papain-like cysteine peptidase superfamily YPTS_2372 IPR000064 Endopeptidase, NLPC/P60 domain YPTS_2373 IPR019833 Manganese/iron superoxide dismutase, binding site YPTS_2373 IPR001189 Manganese/iron superoxide dismutase YPTS_2373 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPTS_2373 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPTS_2373 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPTS_2373 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPTS_2374 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2374 IPR028082 Periplasmic binding protein-like I YPTS_2374 IPR023588 Transcription regulator HTH, PurR YPTS_2374 IPR000843 LacI-type HTH domain YPTS_2375 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2375 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2375 IPR000847 Transcription regulator HTH, LysR YPTS_2375 IPR005119 LysR, substrate-binding YPTS_2376 IPR036259 MFS transporter superfamily YPTS_2376 IPR020846 Major facilitator superfamily domain YPTS_2376 IPR011701 Major facilitator superfamily YPTS_2376 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPTS_2377 IPR003333 Mycolic acid cyclopropane synthase YPTS_2377 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2378 IPR017938 Riboflavin synthase-like beta-barrel YPTS_2378 IPR026017 Lumazine-binding domain YPTS_2378 IPR001783 Lumazine-binding protein YPTS_2378 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPTS_2379 IPR002528 Multi antimicrobial extrusion protein YPTS_2379 IPR022913 Multidrug resistance protein MdtK YPTS_2380 IPR001697 Pyruvate kinase YPTS_2380 IPR040442 Pyruvate kinase-like domain superfamily YPTS_2380 IPR011037 Pyruvate kinase-like, insert domain superfamily YPTS_2380 IPR018209 Pyruvate kinase, active site YPTS_2380 IPR015793 Pyruvate kinase, barrel YPTS_2380 IPR015795 Pyruvate kinase, C-terminal YPTS_2380 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPTS_2380 IPR015806 Pyruvate kinase, insert domain superfamily YPTS_2380 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_2381 IPR016367 Murein-lipoprotein YPTS_2381 IPR006817 Lipoprotein leucine-zipper YPTS_2382 IPR005490 L,D-transpeptidase catalytic domain YPTS_2382 IPR041597 L,D-transpeptidase C-terminal domain YPTS_2382 IPR018392 LysM domain YPTS_2382 IPR038063 L,D-transpeptidase catalytic domain-like YPTS_2383 IPR023939 Cysteine desulfuration protein SufE YPTS_2383 IPR003808 Fe-S metabolism associated domain, SufE-like YPTS_2384 IPR000192 Aminotransferase class V domain YPTS_2384 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2384 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2384 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_2384 IPR010970 Cysteine desulfurase, SufS YPTS_2384 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2385 IPR011542 SUF system FeS cluster assembly, SufD YPTS_2385 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPTS_2385 IPR000825 SUF system FeS cluster assembly, SufBD YPTS_2386 IPR017871 ABC transporter, conserved site YPTS_2386 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPTS_2386 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2386 IPR003439 ABC transporter-like YPTS_2386 IPR003593 AAA+ ATPase domain YPTS_2387 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPTS_2387 IPR010231 SUF system FeS cluster assembly, SufB YPTS_2387 IPR000825 SUF system FeS cluster assembly, SufBD YPTS_2388 IPR011298 FeS assembly scaffold SufA YPTS_2388 IPR035903 HesB-like domain superfamily YPTS_2388 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTS_2388 IPR000361 FeS cluster biogenesis YPTS_2388 IPR016092 FeS cluster insertion protein YPTS_2389 IPR006683 Thioesterase domain YPTS_2389 IPR003736 Phenylacetic acid degradation-related domain YPTS_2389 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI YPTS_2389 IPR029069 HotDog domain superfamily YPTS_2390 IPR004113 FAD-linked oxidase, C-terminal YPTS_2390 IPR016164 FAD-linked oxidase-like, C-terminal YPTS_2390 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_2390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2390 IPR016166 FAD-binding domain, PCMH-type YPTS_2390 IPR006094 FAD linked oxidase, N-terminal YPTS_2390 IPR009051 Alpha-helical ferredoxin YPTS_2391 IPR002549 Transmembrane protein TqsA-like YPTS_2393 IPR018274 PEP-utilising enzyme, active site YPTS_2393 IPR000121 PEP-utilising enzyme, C-terminal YPTS_2393 IPR008279 PEP-utilising enzyme, mobile domain YPTS_2393 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPTS_2393 IPR023151 PEP-utilising enzyme, conserved site YPTS_2393 IPR040442 Pyruvate kinase-like domain superfamily YPTS_2393 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_2393 IPR006319 Phosphoenolpyruvate synthase YPTS_2393 IPR036637 Phosphohistidine domain superfamily YPTS_2393 IPR013815 ATP-grasp fold, subdomain 1 YPTS_2394 IPR005177 Bifunctional kinase-pyrophosphorylase YPTS_2394 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPTS_2394 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily YPTS_2395 IPR006219 DHAP synthase, class 1 YPTS_2395 IPR013785 Aldolase-type TIM barrel YPTS_2395 IPR006218 DAHP synthetase I/KDSA YPTS_2396 IPR003846 Protein adenylyltransferase SelO YPTS_2397 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPTS_2397 IPR004562 Lipoyltransferase/lipoate-protein ligase YPTS_2397 IPR019491 Lipoate protein ligase, C-terminal YPTS_2397 IPR023741 Lipoate-protein ligase A YPTS_2398 IPR038765 Papain-like cysteine peptidase superfamily YPTS_2398 IPR000064 Endopeptidase, NLPC/P60 domain YPTS_2399 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPTS_2399 IPR000390 Small multidrug resistance protein family YPTS_2400 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPTS_2400 IPR000620 EamA domain YPTS_2400 IPR000390 Small multidrug resistance protein family YPTS_2401 IPR003342 Glycosyl transferase family 39/83 YPTS_2401 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPTS_2402 IPR002509 NodB homology domain YPTS_2402 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_2402 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPTS_2403 IPR002376 Formyl transferase, N-terminal YPTS_2403 IPR036291 NAD(P)-binding domain superfamily YPTS_2403 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPTS_2403 IPR005793 Formyl transferase, C-terminal YPTS_2403 IPR001509 NAD-dependent epimerase/dehydratase YPTS_2403 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPTS_2403 IPR036477 Formyl transferase, N-terminal domain superfamily YPTS_2404 IPR001173 Glycosyltransferase 2-like YPTS_2404 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPTS_2404 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_2405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2405 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPTS_2405 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2405 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPTS_2406 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2406 IPR023693 ABC transporter, vitamin B12, BtuD YPTS_2406 IPR017871 ABC transporter, conserved site YPTS_2406 IPR003439 ABC transporter-like YPTS_2406 IPR003593 AAA+ ATPase domain YPTS_2407 IPR036249 Thioredoxin-like superfamily YPTS_2407 IPR029760 Glutathione peroxidase conserved site YPTS_2407 IPR029759 Glutathione peroxidase active site YPTS_2407 IPR000889 Glutathione peroxidase YPTS_2407 IPR033674 Thioredoxin/glutathione peroxidase BtuE YPTS_2408 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPTS_2408 IPR037294 ABC transporter, BtuC-like YPTS_2408 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_2410 IPR020816 Histone-like DNA-binding protein, conserved site YPTS_2410 IPR005684 Integration host factor, alpha subunit YPTS_2410 IPR000119 Histone-like DNA-binding protein YPTS_2410 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPTS_2411 IPR012340 Nucleic acid-binding, OB-fold YPTS_2411 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain YPTS_2411 IPR005146 B3/B4 tRNA-binding domain YPTS_2411 IPR009061 Putative DNA-binding domain superfamily YPTS_2411 IPR005121 Ferrodoxin-fold anticodon-binding domain YPTS_2411 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily YPTS_2411 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPTS_2411 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPTS_2411 IPR005147 tRNA synthetase, B5-domain YPTS_2411 IPR002547 tRNA-binding domain YPTS_2411 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain YPTS_2412 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPTS_2412 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPTS_2412 IPR002319 Phenylalanyl-tRNA synthetase YPTS_2412 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPTS_2412 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPTS_2412 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_2413 IPR035566 Ribosomal protein L20, C-terminal YPTS_2413 IPR005813 Ribosomal protein L20 YPTS_2414 IPR037229 Ribosomal protein L35 superfamily YPTS_2414 IPR001706 Ribosomal protein L35, non-mitochondrial YPTS_2414 IPR018265 Ribosomal protein L35, conserved site YPTS_2414 IPR021137 Ribosomal protein L35 YPTS_2415 IPR019814 Translation initiation factor 3, N-terminal YPTS_2415 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily YPTS_2415 IPR019815 Translation initiation factor 3, C-terminal YPTS_2415 IPR001288 Translation initiation factor 3 YPTS_2415 IPR019813 Translation initiation factor 3, conserved site YPTS_2415 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily YPTS_2416 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_2416 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPTS_2416 IPR033728 Threonine-tRNA ligase catalytic core domain YPTS_2416 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPTS_2416 IPR002320 Threonine-tRNA ligase, class IIa YPTS_2416 IPR012676 TGS-like YPTS_2416 IPR004095 TGS YPTS_2416 IPR012675 Beta-grasp domain superfamily YPTS_2416 IPR036621 Anticodon-binding domain superfamily YPTS_2416 IPR004154 Anticodon-binding YPTS_2416 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTS_2417 IPR025309 KTSC domain YPTS_2419 IPR002771 Multiple antibiotic resistance (MarC)-related YPTS_2420 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A YPTS_2420 IPR023346 Lysozyme-like domain superfamily YPTS_2420 IPR000189 Prokaryotic transglycosylase, active site YPTS_2420 IPR008258 Transglycosylase SLT domain 1 YPTS_2421 IPR006127 Periplasmic solute binding protein, ZnuA-like YPTS_2421 IPR006128 Adhesion lipoprotein YPTS_2421 IPR006129 Adhesin B YPTS_2422 IPR003593 AAA+ ATPase domain YPTS_2422 IPR003439 ABC transporter-like YPTS_2422 IPR017871 ABC transporter, conserved site YPTS_2422 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2423 IPR037294 ABC transporter, BtuC-like YPTS_2423 IPR001626 ABC transporter, TroCD-like YPTS_2424 IPR037294 ABC transporter, BtuC-like YPTS_2424 IPR001626 ABC transporter, TroCD-like YPTS_2427 IPR025229 YniB-like protein YPTS_2428 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_2428 IPR023214 HAD superfamily YPTS_2428 IPR036412 HAD-like superfamily YPTS_2428 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_2428 IPR006439 HAD hydrolase, subfamily IA YPTS_2429 IPR013096 Cupin 2, conserved barrel YPTS_2429 IPR011051 RmlC-like cupin domain superfamily YPTS_2429 IPR014710 RmlC-like jelly roll fold YPTS_2429 IPR025499 Pectin degradation protein KdgF YPTS_2430 IPR021120 KduI/IolB isomerase YPTS_2430 IPR007045 5-keto 4-deoxyuronate isomerase YPTS_2430 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal YPTS_2430 IPR014710 RmlC-like jelly roll fold YPTS_2430 IPR011051 RmlC-like cupin domain superfamily YPTS_2431 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPTS_2431 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2431 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2431 IPR036291 NAD(P)-binding domain superfamily YPTS_2432 IPR010702 Periplasmic pectate lyase YPTS_2433 IPR035906 MetI-like superfamily YPTS_2433 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2434 IPR035906 MetI-like superfamily YPTS_2434 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2435 IPR003439 ABC transporter-like YPTS_2435 IPR017871 ABC transporter, conserved site YPTS_2435 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2435 IPR040582 MalK, OB fold domain YPTS_2435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2435 IPR005116 Transport-associated OB, type 1 YPTS_2435 IPR003593 AAA+ ATPase domain YPTS_2436 IPR006059 Bacterial extracellular solute-binding protein YPTS_2437 IPR009331 Oligogalacturonate-specific porin YPTS_2438 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTS_2438 IPR016956 Inner membrane protein YdjM YPTS_2440 IPR036365 PGBD-like superfamily YPTS_2440 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTS_2440 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTS_2440 IPR036366 PGBD superfamily YPTS_2441 IPR029016 GAF-like domain superfamily YPTS_2441 IPR014757 Transcription regulator IclR, C-terminal YPTS_2441 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2441 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2441 IPR005471 Transcription regulator IclR, N-terminal YPTS_2441 IPR011991 ArsR-like helix-turn-helix domain YPTS_2442 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTS_2442 IPR027946 Oligogalacturonate lyase domain YPTS_2443 IPR036259 MFS transporter superfamily YPTS_2443 IPR020846 Major facilitator superfamily domain YPTS_2443 IPR011701 Major facilitator superfamily YPTS_2444 IPR013783 Immunoglobulin-like fold YPTS_2444 IPR008962 PapD-like superfamily YPTS_2444 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_2444 IPR001829 Pili assembly chaperone, bacterial YPTS_2444 IPR016148 Pili assembly chaperone, C-terminal YPTS_2444 IPR016147 Pili assembly chaperone, N-terminal YPTS_2444 IPR018046 Pili assembly chaperone, conserved site YPTS_2446 IPR018030 Fimbrial membrane usher, conserved site YPTS_2446 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_2446 IPR037224 PapC, N-terminal domain superfamily YPTS_2446 IPR025885 PapC, N-terminal domain YPTS_2446 IPR025949 PapC-like, C-terminal domain YPTS_2446 IPR000015 Outer membrane usher protein YPTS_2447 IPR016148 Pili assembly chaperone, C-terminal YPTS_2447 IPR008962 PapD-like superfamily YPTS_2447 IPR013783 Immunoglobulin-like fold YPTS_2447 IPR018046 Pili assembly chaperone, conserved site YPTS_2447 IPR016147 Pili assembly chaperone, N-terminal YPTS_2447 IPR001829 Pili assembly chaperone, bacterial YPTS_2447 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_2448 IPR008966 Adhesion domain superfamily YPTS_2448 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_2448 IPR000259 Fimbrial-type adhesion domain YPTS_2450 IPR001915 Peptidase M48 YPTS_2450 IPR022919 Peptidase M48, protease HtpX, putative YPTS_2451 IPR001478 PDZ domain YPTS_2451 IPR040573 Tail specific protease, N-terminal domain YPTS_2451 IPR020992 Tail specific protease, C-terminal YPTS_2451 IPR005151 Tail specific protease YPTS_2451 IPR004447 C-terminal-processing peptidase S41A YPTS_2451 IPR036034 PDZ superfamily YPTS_2451 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2452 IPR023529 RNA chaperone ProQ YPTS_2452 IPR016103 ProQ/FinO domain YPTS_2452 IPR036442 ProQ/FinO domain superfamily YPTS_2452 IPR035236 RNA chaperone ProQ, C-terminal YPTS_2453 IPR000614 Free Met sulfoxide reductase conserved site YPTS_2453 IPR003018 GAF domain YPTS_2453 IPR029016 GAF-like domain superfamily YPTS_2454 IPR007498 Intermembrane transport protein PqiA-like YPTS_2454 IPR011031 Multihaem cytochrome YPTS_2454 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPTS_2455 IPR003399 Mce/MlaD YPTS_2459 IPR013783 Immunoglobulin-like fold YPTS_2459 IPR018046 Pili assembly chaperone, conserved site YPTS_2459 IPR016148 Pili assembly chaperone, C-terminal YPTS_2459 IPR001829 Pili assembly chaperone, bacterial YPTS_2459 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_2459 IPR008962 PapD-like superfamily YPTS_2459 IPR016147 Pili assembly chaperone, N-terminal YPTS_2462 IPR009950 Protein of unknown function DUF1480 YPTS_2470 IPR029066 PLP-binding barrel YPTS_2470 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPTS_2470 IPR001608 Alanine racemase, N-terminal YPTS_2470 IPR011079 Alanine racemase, C-terminal YPTS_2470 IPR000821 Alanine racemase YPTS_2470 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTS_2473 IPR005594 YadA-like, C-terminal YPTS_2473 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_2473 IPR024973 ESPR domain YPTS_2473 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTS_2473 IPR005594 YadA-like, C-terminal YPTS_2473 IPR008640 Head domain of trimeric autotransporter adhesin YPTS_2473 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTS_2473 IPR024973 ESPR domain YPTS_2473 IPR008640 Head domain of trimeric autotransporter adhesin YPTS_2473 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_2474 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPTS_2474 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPTS_2474 IPR036365 PGBD-like superfamily YPTS_2474 IPR036366 PGBD superfamily YPTS_2475 IPR007439 Chemotaxis phosphatase, CheZ YPTS_2476 IPR001789 Signal transduction response regulator, receiver domain YPTS_2476 IPR011006 CheY-like superfamily YPTS_2477 IPR035909 Methylesterase CheB, C-terminal YPTS_2477 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type YPTS_2477 IPR001789 Signal transduction response regulator, receiver domain YPTS_2477 IPR011006 CheY-like superfamily YPTS_2477 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPTS_2478 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPTS_2478 IPR026024 Chemotaxis protein methyltransferase CheR YPTS_2478 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPTS_2478 IPR000780 MCP methyltransferase, CheR-type YPTS_2478 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily YPTS_2478 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2479 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTS_2479 IPR003660 HAMP domain YPTS_2479 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_2479 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTS_2479 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTS_2479 IPR004090 Chemotaxis methyl-accepting receptor YPTS_2480 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTS_2480 IPR003660 HAMP domain YPTS_2480 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTS_2480 IPR004090 Chemotaxis methyl-accepting receptor YPTS_2480 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTS_2480 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_2483 IPR002545 CheW-like domain YPTS_2483 IPR039315 Chemotaxis protein CheW YPTS_2483 IPR036061 CheW-like domain superfamily YPTS_2484 IPR036641 HPT domain superfamily YPTS_2484 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2484 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2484 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_2484 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2484 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2484 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily YPTS_2484 IPR015162 CheY binding YPTS_2484 IPR002545 CheW-like domain YPTS_2484 IPR036061 CheW-like domain superfamily YPTS_2484 IPR004105 Histidine kinase CheA-like, homodimeric domain YPTS_2484 IPR035891 CheY-binding domain of CheA YPTS_2484 IPR005467 Histidine kinase domain YPTS_2485 IPR025713 Motility protein B, N-terminal domain YPTS_2485 IPR006665 OmpA-like domain YPTS_2485 IPR036737 OmpA-like domain superfamily YPTS_2486 IPR000540 Flagellar motor protein MotA, conserved site YPTS_2486 IPR022522 Flagellar motor stator, MotA YPTS_2486 IPR002898 MotA/TolQ/ExbB proton channel YPTS_2487 IPR007944 Flagellar transcriptional activator FlhC YPTS_2488 IPR023559 Flagellar transcriptional activator FlhD YPTS_2488 IPR036194 Flagellar transcriptional activator FlhD superfamily YPTS_2489 IPR006068 Cation-transporting P-type ATPase, C-terminal YPTS_2489 IPR001757 P-type ATPase YPTS_2489 IPR006415 P-type ATPase, subfamily IIIB YPTS_2489 IPR023214 HAD superfamily YPTS_2489 IPR008250 P-type ATPase, A domain superfamily YPTS_2489 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_2489 IPR036412 HAD-like superfamily YPTS_2489 IPR023299 P-type ATPase, cytoplasmic domain N YPTS_2489 IPR004014 Cation-transporting P-type ATPase, N-terminal YPTS_2489 IPR018303 P-type ATPase, phosphorylation site YPTS_2490 IPR003416 MgtC/SapB/SrpB/YhiD family YPTS_2491 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTS_2491 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTS_2491 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_2491 IPR003660 HAMP domain YPTS_2491 IPR004090 Chemotaxis methyl-accepting receptor YPTS_2491 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTS_2492 IPR019717 Dextransucrase DSRB YPTS_2493 IPR012340 Nucleic acid-binding, OB-fold YPTS_2493 IPR002059 Cold-shock protein, DNA-binding YPTS_2493 IPR019844 Cold-shock (CSD) domain YPTS_2493 IPR012156 Cold shock, CspA YPTS_2493 IPR011129 Cold shock domain YPTS_2494 IPR004199 Beta galactosidase small chain/ domain 5 YPTS_2494 IPR032312 Beta-galactosidase, domain 4 YPTS_2494 IPR013783 Immunoglobulin-like fold YPTS_2494 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPTS_2494 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPTS_2494 IPR023230 Glycoside hydrolase, family 2, conserved site YPTS_2494 IPR006103 Glycoside hydrolase family 2, catalytic domain YPTS_2494 IPR017853 Glycoside hydrolase superfamily YPTS_2494 IPR023232 Glycoside hydrolase, family 2, active site YPTS_2494 IPR006101 Glycoside hydrolase, family 2 YPTS_2494 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTS_2494 IPR008979 Galactose-binding-like domain superfamily YPTS_2494 IPR011013 Galactose mutarotase-like domain superfamily YPTS_2494 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YPTS_2494 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPTS_2496 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_2496 IPR032821 Ketoacyl-synthetase, C-terminal extension YPTS_2496 IPR036291 NAD(P)-binding domain superfamily YPTS_2496 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTS_2496 IPR018201 Beta-ketoacyl synthase, active site YPTS_2496 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_2496 IPR011032 GroES-like superfamily YPTS_2496 IPR020807 Polyketide synthase, dehydratase domain YPTS_2496 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_2496 IPR042104 Polyketide synthase, dehydratase domain superfamily YPTS_2496 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_2496 IPR013968 Polyketide synthase, ketoreductase domain YPTS_2496 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTS_2496 IPR009081 Phosphopantetheine binding ACP domain YPTS_2496 IPR016039 Thiolase-like YPTS_2496 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTS_2496 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_2496 IPR014043 Acyl transferase YPTS_2496 IPR036736 ACP-like superfamily YPTS_2496 IPR020843 Polyketide synthase, enoylreductase domain YPTS_2498 IPR019713 Inner membrane protein YlaC YPTS_2500 IPR000485 AsnC-type HTH domain YPTS_2500 IPR011008 Dimeric alpha-beta barrel YPTS_2500 IPR019888 Transcription regulator AsnC-type YPTS_2500 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTS_2500 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTS_2500 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2500 IPR011991 ArsR-like helix-turn-helix domain YPTS_2500 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2502 IPR017704 Putative selenium-binding protein YdfZ YPTS_2503 IPR000560 Histidine phosphatase superfamily, clade-2 YPTS_2503 IPR029033 Histidine phosphatase superfamily YPTS_2503 IPR033379 Histidine acid phosphatase active site YPTS_2505 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2505 IPR002577 Helix-turn-helix, HxlR type YPTS_2505 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2506 IPR036291 NAD(P)-binding domain superfamily YPTS_2506 IPR008030 NmrA-like domain YPTS_2507 IPR003660 HAMP domain YPTS_2507 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_2507 IPR001610 PAC motif YPTS_2507 IPR000014 PAS domain YPTS_2507 IPR035965 PAS domain superfamily YPTS_2507 IPR013655 PAS fold-3 YPTS_2507 IPR004090 Chemotaxis methyl-accepting receptor YPTS_2509 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_2509 IPR028082 Periplasmic binding protein-like I YPTS_2509 IPR000843 LacI-type HTH domain YPTS_2509 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2510 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTS_2510 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPTS_2510 IPR024084 Isopropylmalate dehydrogenase-like domain YPTS_2511 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPTS_2511 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_2511 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPTS_2511 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPTS_2511 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_2512 IPR000086 NUDIX hydrolase domain YPTS_2512 IPR020476 NUDIX hydrolase YPTS_2512 IPR020084 NUDIX hydrolase, conserved site YPTS_2512 IPR033713 Phosphatase NudJ YPTS_2512 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_2513 IPR004506 tRNA-specific 2-thiouridylase YPTS_2513 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2513 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPTS_2514 IPR035932 HflD-like superfamily YPTS_2514 IPR007451 High frequency lysogenization protein HflD YPTS_2515 IPR020557 Fumarate lyase, conserved site YPTS_2515 IPR000362 Fumarate lyase family YPTS_2515 IPR022761 Fumarate lyase, N-terminal YPTS_2515 IPR004769 Adenylosuccinate lyase YPTS_2515 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPTS_2515 IPR008948 L-Aspartase-like YPTS_2515 IPR024083 Fumarase/histidase, N-terminal YPTS_2518 IPR001789 Signal transduction response regulator, receiver domain YPTS_2518 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2518 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2518 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2518 IPR011006 CheY-like superfamily YPTS_2519 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2519 IPR038429 PhoQ Sensor superfamily YPTS_2519 IPR015014 PhoQ Sensor YPTS_2519 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2519 IPR003660 HAMP domain YPTS_2519 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2519 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2519 IPR005467 Histidine kinase domain YPTS_2520 IPR003347 JmjC domain YPTS_2520 IPR039994 JmjC domain-containing YPTS_2521 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTS_2521 IPR011650 Peptidase M20, dimerisation domain YPTS_2521 IPR002933 Peptidase M20 YPTS_2521 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPTS_2521 IPR036264 Bacterial exopeptidase dimerisation domain YPTS_2522 IPR026590 Sirtuin family, catalytic core domain YPTS_2522 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPTS_2522 IPR003000 Sirtuin family YPTS_2522 IPR026591 Sirtuin, catalytic core small domain superfamily YPTS_2522 IPR027546 Sirtuin, class III YPTS_2523 IPR000600 ROK family YPTS_2523 IPR023505 N-acetyl-D-glucosamine kinase YPTS_2524 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPTS_2524 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type YPTS_2524 IPR025857 MacB-like periplasmic core domain YPTS_2524 IPR003838 ABC transporter permease protein domain YPTS_2525 IPR015854 ABC transporter, lipoprotein release, LolD YPTS_2525 IPR003593 AAA+ ATPase domain YPTS_2525 IPR003439 ABC transporter-like YPTS_2525 IPR011924 Lipoprotein releasing system, ATP-binding protein YPTS_2525 IPR017871 ABC transporter, conserved site YPTS_2525 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2526 IPR025857 MacB-like periplasmic core domain YPTS_2526 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPTS_2526 IPR003838 ABC transporter permease protein domain YPTS_2527 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_2527 IPR011545 DEAD/DEAH box helicase domain YPTS_2527 IPR004576 Transcription-repair coupling factor YPTS_2527 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPTS_2527 IPR003711 CarD-like/TRCF domain YPTS_2527 IPR041471 UvrB, interaction domain YPTS_2527 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2527 IPR037235 TRCF-like, C-terminal domain YPTS_2527 IPR001650 Helicase, C-terminal YPTS_2527 IPR036101 CarD-like/TRCF domain superfamily YPTS_2528 IPR008816 Glycine zipper 2TM domain YPTS_2531 IPR023753 FAD/NAD(P)-binding domain YPTS_2531 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_2532 IPR029058 Alpha/Beta hydrolase fold YPTS_2532 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTS_2532 IPR022987 Uncharacterised protein family UPF0227 YPTS_2533 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPTS_2533 IPR017853 Glycoside hydrolase superfamily YPTS_2533 IPR001764 Glycoside hydrolase, family 3, N-terminal YPTS_2533 IPR019800 Glycoside hydrolase, family 3, active site YPTS_2533 IPR022956 Beta-hexosaminidase, bacterial YPTS_2534 IPR002575 Aminoglycoside phosphotransferase YPTS_2534 IPR011009 Protein kinase-like domain superfamily YPTS_2534 IPR014093 Thiamine kinase YPTS_2535 IPR014094 Penicillin-binding protein activator LpoB YPTS_2535 IPR012640 Membrane lipoprotein, lipid attachment site YPTS_2536 IPR010824 Protein of unknown function DUF1425 YPTS_2536 IPR038483 YcfL-like superfamily YPTS_2537 IPR001310 Histidine triad (HIT) protein YPTS_2537 IPR036265 HIT-like superfamily YPTS_2537 IPR019808 Histidine triad, conserved site YPTS_2537 IPR011146 HIT-like domain YPTS_2538 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPTS_2538 IPR036291 NAD(P)-binding domain superfamily YPTS_2545 IPR006430 Phage portal protein PBSX family YPTS_2545 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTS_2551 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTS_2551 IPR036878 Glucose permease domain IIB YPTS_2551 IPR003352 Phosphotransferase system, EIIC YPTS_2551 IPR011299 PTS system glucose-specific IIBC component YPTS_2551 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTS_2551 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPTS_2551 IPR001996 Phosphotransferase system, IIB component, type 1 YPTS_2552 IPR015991 Uncharacterised hydrolase TatD-type YPTS_2552 IPR032466 Metal-dependent hydrolase YPTS_2552 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPTS_2552 IPR001130 TatD family YPTS_2553 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPTS_2553 IPR015199 DNA polymerase III, delta subunit, C-terminal YPTS_2553 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2553 IPR004622 DNA polymerase III, delta prime subunit YPTS_2554 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2554 IPR018094 Thymidylate kinase YPTS_2554 IPR018095 Thymidylate kinase, conserved site YPTS_2554 IPR039430 Thymidylate kinase-like domain YPTS_2555 IPR003770 Endolytic murein transglycosylase YPTS_2556 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPTS_2556 IPR018300 Aminotransferase, class IV, conserved site YPTS_2556 IPR001544 Aminotransferase class IV YPTS_2556 IPR017824 Aminodeoxychorismate lyase, class IV YPTS_2557 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPTS_2557 IPR016039 Thiolase-like YPTS_2557 IPR018201 Beta-ketoacyl synthase, active site YPTS_2557 IPR000794 Beta-ketoacyl synthase YPTS_2557 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_2557 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_2557 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_2558 IPR006162 Phosphopantetheine attachment site YPTS_2558 IPR009081 Phosphopantetheine binding ACP domain YPTS_2558 IPR003231 Acyl carrier protein (ACP) YPTS_2558 IPR036736 ACP-like superfamily YPTS_2559 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPTS_2559 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2559 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2559 IPR036291 NAD(P)-binding domain superfamily YPTS_2560 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPTS_2560 IPR014043 Acyl transferase YPTS_2560 IPR001227 Acyl transferase domain superfamily YPTS_2560 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPTS_2560 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPTS_2560 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPTS_2561 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPTS_2561 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPTS_2561 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPTS_2561 IPR016039 Thiolase-like YPTS_2562 IPR003664 Fatty acid synthesis PlsX protein YPTS_2562 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPTS_2563 IPR002677 Ribosomal protein L32p YPTS_2563 IPR011332 Zinc-binding ribosomal protein YPTS_2564 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria YPTS_2564 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YPTS_2565 IPR029001 Inosine triphosphate pyrophosphatase-like YPTS_2565 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPTS_2566 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_2566 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTS_2566 IPR002942 RNA-binding S4 domain YPTS_2566 IPR036986 RNA-binding S4 domain superfamily YPTS_2566 IPR006225 Pseudouridine synthase, RluC/RluD YPTS_2566 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_2568 IPR028878 Ribonuclease E YPTS_2568 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPTS_2568 IPR021968 Polyribonucleotide phosphorylase C-terminal YPTS_2568 IPR012340 Nucleic acid-binding, OB-fold YPTS_2568 IPR004659 Ribonuclease E/G YPTS_2568 IPR022967 RNA-binding domain, S1 YPTS_2568 IPR003029 S1 domain YPTS_2569 IPR011008 Dimeric alpha-beta barrel YPTS_2569 IPR007138 Antibiotic biosynthesis monooxygenase domain YPTS_2570 IPR032466 Metal-dependent hydrolase YPTS_2570 IPR006680 Amidohydrolase-related YPTS_2570 IPR004721 Dihydroorotase homodimeric type YPTS_2570 IPR002195 Dihydroorotase, conserved site YPTS_2571 IPR036687 DinI-like superfamily YPTS_2571 IPR010391 DNA damage-inducible protein DinI-like YPTS_2572 IPR025730 Biofilm regulator BssS YPTS_2573 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_2573 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPTS_2573 IPR006076 FAD dependent oxidoreductase YPTS_2575 IPR001207 Transposase, mutator type YPTS_2576 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2576 IPR000792 Transcription regulator LuxR, C-terminal YPTS_2576 IPR001789 Signal transduction response regulator, receiver domain YPTS_2576 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2576 IPR011006 CheY-like superfamily YPTS_2578 IPR002549 Transmembrane protein TqsA-like YPTS_2582 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPTS_2582 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTS_2584 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPTS_2584 IPR036259 MFS transporter superfamily YPTS_2584 IPR020846 Major facilitator superfamily domain YPTS_2584 IPR005279 Dipeptide/tripeptide permease YPTS_2584 IPR000109 Proton-dependent oligopeptide transporter family YPTS_2585 IPR010780 Protein of unknown function DUF1375 YPTS_2586 IPR001173 Glycosyltransferase 2-like YPTS_2586 IPR023725 Glucan biosynthesis glucosyltransferase H YPTS_2586 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_2587 IPR011013 Galactose mutarotase-like domain superfamily YPTS_2587 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTS_2587 IPR014438 Glucan biosynthesis protein MdoG/MdoD YPTS_2587 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal YPTS_2587 IPR013783 Immunoglobulin-like fold YPTS_2587 IPR014756 Immunoglobulin E-set YPTS_2587 IPR023704 Glucan biosynthesis protein G YPTS_2588 IPR002656 Acyltransferase 3 YPTS_2588 IPR023723 Glucan biosynthesis protein C YPTS_2590 IPR036318 FAD-binding, type PCMH-like superfamily YPTS_2590 IPR005170 Transporter-associated domain YPTS_2590 IPR006153 Cation/H+ exchanger YPTS_2590 IPR016169 FAD-binding, type PCMH, subdomain 2 YPTS_2590 IPR023729 K(+)/H(+) antiporter NhaP2 YPTS_2590 IPR006037 Regulator of K+ conductance, C-terminal YPTS_2590 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTS_2590 IPR038770 Sodium/solute symporter superfamily YPTS_2590 IPR030151 K(+)/H(+) antiporter NhaP YPTS_2592 IPR018311 Autoinducer synthesis, conserved site YPTS_2592 IPR001690 Autoinducer synthase YPTS_2592 IPR016181 Acyl-CoA N-acyltransferase YPTS_2593 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTS_2593 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPTS_2593 IPR000792 Transcription regulator LuxR, C-terminal YPTS_2593 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2593 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2594 IPR005119 LysR, substrate-binding YPTS_2594 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2594 IPR000847 Transcription regulator HTH, LysR YPTS_2594 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2596 IPR036259 MFS transporter superfamily YPTS_2596 IPR005828 Major facilitator, sugar transporter-like YPTS_2596 IPR020846 Major facilitator superfamily domain YPTS_2596 IPR005829 Sugar transporter, conserved site YPTS_2598 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_2598 IPR020471 Aldo/keto reductase YPTS_2598 IPR023210 NADP-dependent oxidoreductase domain YPTS_2599 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST YPTS_2600 IPR013399 CRISPR-associated protein Csy3 YPTS_2601 IPR013398 CRISPR-associated protein Csy2 YPTS_2602 IPR013397 CRISPR-associated protein Csy1 YPTS_2603 IPR006483 CRISPR-associated Cas3-type HD domain YPTS_2603 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2603 IPR038257 CRISPR-associated Cas3-type HD domain superfamily YPTS_2603 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPTS_2604 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain YPTS_2604 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPTS_2604 IPR002729 CRISPR-associated protein Cas1 YPTS_2604 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain YPTS_2605 IPR010920 LSM domain superfamily YPTS_2605 IPR006685 Mechanosensitive ion channel MscS YPTS_2605 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTS_2605 IPR030192 Miniconductance mechanosensitive channel YbdG YPTS_2609 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YPTS_2609 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase YPTS_2609 IPR007184 Mannoside phosphorylase YPTS_2610 IPR035906 MetI-like superfamily YPTS_2610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2611 IPR035906 MetI-like superfamily YPTS_2611 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2613 IPR000843 LacI-type HTH domain YPTS_2613 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2613 IPR028082 Periplasmic binding protein-like I YPTS_2614 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTS_2614 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTS_2614 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTS_2614 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTS_2614 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTS_2614 IPR005841 Alpha-D-phosphohexomutase superfamily YPTS_2614 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTS_2614 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTS_2615 IPR003593 AAA+ ATPase domain YPTS_2615 IPR003439 ABC transporter-like YPTS_2615 IPR017871 ABC transporter, conserved site YPTS_2615 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTS_2615 IPR040582 MalK, OB fold domain YPTS_2615 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2618 IPR028190 Novel toxin 21 YPTS_2618 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_2618 IPR008619 Filamentous haemagglutinin repeat YPTS_2618 IPR038181 Novel toxin 21 superfamily YPTS_2618 IPR006914 VENN motif-containing domain YPTS_2618 IPR012334 Pectin lyase fold YPTS_2618 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_2618 IPR011050 Pectin lyase fold/virulence factor YPTS_2618 IPR025157 Hemagglutinin repeat YPTS_2621 IPR012334 Pectin lyase fold YPTS_2621 IPR025157 Hemagglutinin repeat YPTS_2621 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_2621 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_2621 IPR024973 ESPR domain YPTS_2621 IPR006914 VENN motif-containing domain YPTS_2621 IPR011050 Pectin lyase fold/virulence factor YPTS_2622 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_2622 IPR034746 POTRA domain YPTS_2622 IPR035251 ShlB, POTRA domain YPTS_2622 IPR027282 Two partner secretion pathway transporter YPTS_2622 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_2623 IPR000951 Phthalate dioxygenase reductase YPTS_2623 IPR017938 Riboflavin synthase-like beta-barrel YPTS_2623 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_2623 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPTS_2623 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_2623 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_2623 IPR039003 Carnitine monooxygenase reductase subunit YPTS_2623 IPR012675 Beta-grasp domain superfamily YPTS_2623 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_2623 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_2623 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_2624 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPTS_2624 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPTS_2624 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPTS_2624 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPTS_2624 IPR039004 Carnitine monooxygenase oxygenase subunit YPTS_2624 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPTS_2625 IPR018093 BCCT transporter, conserved site YPTS_2625 IPR000060 BCCT transporter family YPTS_2627 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPTS_2627 IPR024084 Isopropylmalate dehydrogenase-like domain YPTS_2627 IPR011829 Tartrate dehydrogenase YPTS_2628 IPR000847 Transcription regulator HTH, LysR YPTS_2628 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2628 IPR005119 LysR, substrate-binding YPTS_2628 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2629 IPR000843 LacI-type HTH domain YPTS_2629 IPR028082 Periplasmic binding protein-like I YPTS_2629 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2630 IPR001851 ABC transporter, permease YPTS_2631 IPR003593 AAA+ ATPase domain YPTS_2631 IPR003439 ABC transporter-like YPTS_2631 IPR017871 ABC transporter, conserved site YPTS_2631 IPR015861 ABC transporter, ribose import, RbsA YPTS_2631 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2632 IPR028082 Periplasmic binding protein-like I YPTS_2632 IPR025997 Periplasmic binding protein YPTS_2633 IPR020843 Polyketide synthase, enoylreductase domain YPTS_2633 IPR036291 NAD(P)-binding domain superfamily YPTS_2633 IPR011032 GroES-like superfamily YPTS_2633 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_2633 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_2637 IPR000758 Virulence-related outer membrane protein YPTS_2637 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_2637 IPR027385 Outer membrane protein beta-barrel domain YPTS_2638 IPR000620 EamA domain YPTS_2640 IPR041698 Methyltransferase domain 25 YPTS_2640 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPTS_2640 IPR023506 Trans-aconitate 2-methyltransferase YPTS_2640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2641 IPR023188 DNA-binding protein Dps, conserved site YPTS_2641 IPR002177 DNA-binding protein Dps YPTS_2641 IPR012347 Ferritin-like YPTS_2641 IPR009078 Ferritin-like superfamily YPTS_2641 IPR008331 Ferritin/DPS protein domain YPTS_2641 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPTS_2643 IPR001320 Ionotropic glutamate receptor YPTS_2643 IPR018313 Solute-binding protein family 3, conserved site YPTS_2643 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_2644 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_2644 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2644 IPR035906 MetI-like superfamily YPTS_2645 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2645 IPR017871 ABC transporter, conserved site YPTS_2645 IPR003439 ABC transporter-like YPTS_2645 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTS_2645 IPR003593 AAA+ ATPase domain YPTS_2646 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_2646 IPR013655 PAS fold-3 YPTS_2646 IPR035965 PAS domain superfamily YPTS_2646 IPR000700 PAS-associated, C-terminal YPTS_2646 IPR000014 PAS domain YPTS_2646 IPR001610 PAC motif YPTS_2646 IPR004090 Chemotaxis methyl-accepting receptor YPTS_2647 IPR016909 Ribosomal RNA large subunit methyltransferase F YPTS_2647 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2647 IPR010286 METTL16/RlmF family YPTS_2648 IPR025543 Dodecin-like YPTS_2648 IPR036275 YdgH-like superfamily YPTS_2648 IPR010854 Domain of unknown function DUF1471 YPTS_2649 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPTS_2649 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPTS_2649 IPR017459 Glycosyl transferase family 3, N-terminal domain YPTS_2650 IPR020845 AMP-binding, conserved site YPTS_2650 IPR025110 AMP-binding enzyme, C-terminal domain YPTS_2650 IPR000873 AMP-dependent synthetase/ligase YPTS_2650 IPR010192 2-succinylbenzoate--CoA ligase YPTS_2650 IPR042099 AMP-dependent synthetase-like superfamily YPTS_2651 IPR029017 Enolase-like, N-terminal YPTS_2651 IPR029065 Enolase C-terminal domain-like YPTS_2651 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPTS_2651 IPR010196 o-Succinylbenzoate synthase, MenC type1 YPTS_2651 IPR036849 Enolase-like, C-terminal domain superfamily YPTS_2652 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB YPTS_2652 IPR001753 Enoyl-CoA hydratase/isomerase YPTS_2652 IPR014748 Enoyl-CoA hydratase, C-terminal YPTS_2652 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2652 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPTS_2653 IPR000073 Alpha/beta hydrolase fold-1 YPTS_2653 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPTS_2653 IPR029058 Alpha/Beta hydrolase fold YPTS_2654 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase YPTS_2654 IPR032264 Menaquinone biosynthesis protein MenD, middle domain YPTS_2654 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPTS_2654 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPTS_2654 IPR029061 Thiamin diphosphate-binding fold YPTS_2655 IPR015890 Chorismate-utilising enzyme, C-terminal YPTS_2655 IPR005801 ADC synthase YPTS_2655 IPR004561 Isochorismate synthase YPTS_2655 IPR034681 Isochorismate synthase MenF YPTS_2657 IPR010279 Inner membrane protein YqjD/ElaB YPTS_2660 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPTS_2660 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPTS_2660 IPR004786 6-phosphogluconate dehydratase YPTS_2660 IPR037237 IlvD/EDD, N-terminal domain YPTS_2660 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPTS_2661 IPR010371 Uncharacterised protein family UPF0303 YPTS_2661 IPR005624 Haem-degrading YPTS_2661 IPR038084 GlcG-like domain superfamily YPTS_2662 IPR011701 Major facilitator superfamily YPTS_2662 IPR020846 Major facilitator superfamily domain YPTS_2662 IPR036259 MFS transporter superfamily YPTS_2663 IPR036291 NAD(P)-binding domain superfamily YPTS_2663 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_2663 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_2664 IPR028082 Periplasmic binding protein-like I YPTS_2664 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2664 IPR000843 LacI-type HTH domain YPTS_2666 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_2666 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_2666 IPR036291 NAD(P)-binding domain superfamily YPTS_2667 IPR031322 Shikimate kinase/gluconokinase YPTS_2667 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2667 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPTS_2668 IPR004375 YhcH/YjgK/YiaL family YPTS_2668 IPR037012 YhcH/YjgK/YiaL superfamily YPTS_2670 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTS_2670 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPTS_2671 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPTS_2671 IPR003918 NADH:ubiquinone oxidoreductase YPTS_2671 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTS_2672 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPTS_2672 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPTS_2672 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPTS_2672 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPTS_2673 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPTS_2673 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YPTS_2674 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPTS_2674 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ YPTS_2675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2675 IPR010226 NADH-quinone oxidoreductase, chain I YPTS_2676 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPTS_2676 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPTS_2677 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_2677 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_2677 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_2677 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_2677 IPR006656 Molybdopterin oxidoreductase YPTS_2677 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_2677 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPTS_2677 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPTS_2677 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPTS_2678 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPTS_2678 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPTS_2678 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily YPTS_2678 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPTS_2678 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPTS_2678 IPR019554 Soluble ligand binding domain YPTS_2678 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain YPTS_2679 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal YPTS_2679 IPR042128 NuoE domain YPTS_2679 IPR036249 Thioredoxin-like superfamily YPTS_2679 IPR002023 NADH-quinone oxidoreductase subunit E-like YPTS_2680 IPR023062 NADH dehydrogenase, subunit CD YPTS_2680 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPTS_2680 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily YPTS_2680 IPR010218 NADH dehydrogenase, subunit C YPTS_2680 IPR029014 [NiFe]-hydrogenase, large subunit YPTS_2680 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily YPTS_2680 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPTS_2680 IPR001135 NADH-quinone oxidoreductase, subunit D YPTS_2680 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPTS_2681 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPTS_2681 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPTS_2682 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPTS_2682 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPTS_2682 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily YPTS_2683 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2683 IPR000847 Transcription regulator HTH, LysR YPTS_2683 IPR005119 LysR, substrate-binding YPTS_2683 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2684 IPR004839 Aminotransferase, class I/classII YPTS_2684 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2684 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2684 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2685 IPR022971 5'-deoxynucleotidase YfbR YPTS_2685 IPR039356 Metal-dependent nucleoside 5'-monophosphatase YPTS_2685 IPR003607 HD/PDEase domain YPTS_2687 IPR031312 Sodium/sulphate symporter, conserved site YPTS_2687 IPR004680 Citrate transporter-like domain YPTS_2687 IPR006037 Regulator of K+ conductance, C-terminal YPTS_2687 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTS_2688 IPR023214 HAD superfamily YPTS_2688 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_2688 IPR006439 HAD hydrolase, subfamily IA YPTS_2688 IPR036412 HAD-like superfamily YPTS_2688 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_2689 IPR023145 YfbU, helix-hairpin domain superfamily YPTS_2689 IPR023146 YfbU, alpha-helical bundle domain superfamily YPTS_2689 IPR005587 Uncharacterised protein family UPF0304, YfbU YPTS_2690 IPR007334 Uncharacterised protein family UPF0208 YPTS_2691 IPR004372 Acetate/propionate kinase YPTS_2691 IPR000890 Aliphatic acid kinase, short-chain YPTS_2691 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPTS_2692 IPR004614 Phosphate acetyltransferase YPTS_2692 IPR002505 Phosphate acetyl/butaryl transferase YPTS_2692 IPR010766 DRTGG YPTS_2692 IPR042113 Phosphate acetyltransferase, domain 1 YPTS_2692 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YPTS_2692 IPR042112 Phosphate acetyltransferase, domain 2 YPTS_2692 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2692 IPR016475 Phosphate acetyltransferase, bacteria YPTS_2693 IPR000843 LacI-type HTH domain YPTS_2693 IPR028082 Periplasmic binding protein-like I YPTS_2693 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_2693 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2694 IPR002178 PTS EIIA type-2 domain YPTS_2694 IPR016152 Phosphotransferase/anion transporter YPTS_2696 IPR004703 Phosphotransferase system, sugar-specific permease component YPTS_2697 IPR000086 NUDIX hydrolase domain YPTS_2697 IPR024195 NUDIX hydrolase, YfcD, predicted YPTS_2697 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_2698 IPR000979 Phosphodiesterase MJ0936/Vps29 YPTS_2698 IPR041802 YfcE-like, metallophosphatase domain YPTS_2698 IPR029052 Metallo-dependent phosphatase-like YPTS_2698 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type YPTS_2698 IPR020935 Phosphodiesterase YfcE, conserved site YPTS_2700 IPR036291 NAD(P)-binding domain superfamily YPTS_2700 IPR010099 Epimerase family protein SDR39U1 YPTS_2700 IPR001509 NAD-dependent epimerase/dehydratase YPTS_2700 IPR013549 Domain of unknown function DUF1731 YPTS_2701 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPTS_2701 IPR003439 ABC transporter-like YPTS_2701 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2701 IPR017871 ABC transporter, conserved site YPTS_2701 IPR003593 AAA+ ATPase domain YPTS_2702 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2702 IPR035906 MetI-like superfamily YPTS_2702 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_2703 IPR035906 MetI-like superfamily YPTS_2703 IPR030199 Histidine transport system permease protein HisQ YPTS_2703 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2703 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_2704 IPR018313 Solute-binding protein family 3, conserved site YPTS_2704 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTS_2704 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_2706 IPR004507 Flavin prenyltransferase UbiX-like YPTS_2706 IPR003382 Flavoprotein YPTS_2706 IPR036551 Flavin prenyltransferase-like YPTS_2707 IPR029057 Phosphoribosyltransferase-like YPTS_2707 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_2707 IPR000836 Phosphoribosyltransferase domain YPTS_2707 IPR017932 Glutamine amidotransferase type 2 domain YPTS_2707 IPR035584 Amidophosphoribosyltransferase, N-terminal YPTS_2707 IPR005854 Amidophosphoribosyltransferase YPTS_2708 IPR003825 Colicin V production, CvpA YPTS_2709 IPR032898 Cell division protein DedD YPTS_2709 IPR007730 Sporulation-like domain YPTS_2709 IPR036680 Sporulation-like domain superfamily YPTS_2710 IPR013221 Mur ligase, central YPTS_2710 IPR036565 Mur-like, catalytic domain superfamily YPTS_2710 IPR004101 Mur ligase, C-terminal YPTS_2710 IPR036615 Mur ligase, C-terminal domain superfamily YPTS_2710 IPR018109 Folylpolyglutamate synthetase, conserved site YPTS_2710 IPR001645 Folylpolyglutamate synthetase YPTS_2711 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2711 IPR041010 Acetyl-coA carboxylase zinc finger domain YPTS_2711 IPR034733 Acetyl-CoA carboxylase YPTS_2711 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal YPTS_2711 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPTS_2712 IPR032816 SNARE associated Golgi protein YPTS_2712 IPR032818 DedA family YPTS_2713 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPTS_2713 IPR001406 Pseudouridine synthase I, TruA YPTS_2713 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_2713 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPTS_2714 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTS_2714 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTS_2714 IPR036291 NAD(P)-binding domain superfamily YPTS_2715 IPR036291 NAD(P)-binding domain superfamily YPTS_2715 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_2715 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTS_2715 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTS_2715 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_2715 IPR020921 Erythronate-4-phosphate dehydrogenase YPTS_2715 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPTS_2715 IPR038251 PdxB, dimerisation domain superfamily YPTS_2717 IPR000620 EamA domain YPTS_2718 IPR023597 Flagellar regulator Flk YPTS_2719 IPR008966 Adhesion domain superfamily YPTS_2719 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_2719 IPR000259 Fimbrial-type adhesion domain YPTS_2720 IPR001920 Asp/Glu racemase YPTS_2720 IPR018187 Asp/Glu racemase, active site 1 YPTS_2720 IPR033134 Asp/Glu racemase, active site 2 YPTS_2720 IPR004380 Aspartate racemase YPTS_2720 IPR015942 Asp/Glu/hydantoin racemase YPTS_2721 IPR016039 Thiolase-like YPTS_2721 IPR000794 Beta-ketoacyl synthase YPTS_2721 IPR018201 Beta-ketoacyl synthase, active site YPTS_2721 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPTS_2721 IPR014030 Beta-ketoacyl synthase, N-terminal YPTS_2721 IPR014031 Beta-ketoacyl synthase, C-terminal YPTS_2722 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPTS_2722 IPR008471 MnmC-like methyltransferase YPTS_2722 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_2722 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2722 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPTS_2722 IPR006076 FAD dependent oxidoreductase YPTS_2723 IPR014987 Uncharacterised protein family YfcL YPTS_2724 IPR007411 Elongation factor P hydroxylase YPTS_2725 IPR002781 Transmembrane protein TauE-like YPTS_2726 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPTS_2726 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTS_2727 IPR020541 Chorismate synthase, conserved site YPTS_2727 IPR035904 Chorismate synthase AroC superfamily YPTS_2727 IPR000453 Chorismate synthase YPTS_2728 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_2728 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPTS_2728 IPR004556 Methyltransferase HemK-like YPTS_2728 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_2728 IPR007848 Methyltransferase small domain YPTS_2729 IPR022990 Uncharacterised protein family UPF0115 YPTS_2729 IPR036063 Smr domain superfamily YPTS_2729 IPR002625 Smr domain YPTS_2730 IPR004449 Phosphohistidine phosphatase SixA YPTS_2730 IPR029033 Histidine phosphatase superfamily YPTS_2730 IPR013078 Histidine phosphatase superfamily, clade-1 YPTS_2733 IPR029045 ClpP/crotonase-like domain superfamily YPTS_2733 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPTS_2733 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPTS_2733 IPR001753 Enoyl-CoA hydratase/isomerase YPTS_2733 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPTS_2733 IPR036291 NAD(P)-binding domain superfamily YPTS_2733 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_2733 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPTS_2734 IPR020616 Thiolase, N-terminal YPTS_2734 IPR020615 Thiolase, acyl-enzyme intermediate active site YPTS_2734 IPR002155 Thiolase YPTS_2734 IPR020613 Thiolase, conserved site YPTS_2734 IPR016039 Thiolase-like YPTS_2734 IPR012806 Acetyl-CoA C-acyltransferase FadI YPTS_2734 IPR020610 Thiolase, active site YPTS_2734 IPR020617 Thiolase, C-terminal YPTS_2735 IPR035571 UPF0234-like, C-terminal YPTS_2735 IPR005272 Conserved hypothetical protein CHP00743 YPTS_2736 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPTS_2736 IPR042117 OMPP1/FadL/TodX superfamily YPTS_2737 IPR007428 MlaA lipoprotein YPTS_2738 IPR005616 CcmH/CycL/Ccl2/NrfF family YPTS_2738 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPTS_2738 IPR013026 Tetratricopeptide repeat-containing domain YPTS_2738 IPR019734 Tetratricopeptide repeat YPTS_2738 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_2739 IPR013026 Tetratricopeptide repeat-containing domain YPTS_2739 IPR019734 Tetratricopeptide repeat YPTS_2739 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_2739 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPTS_2739 IPR005616 CcmH/CycL/Ccl2/NrfF family YPTS_2740 IPR013766 Thioredoxin domain YPTS_2740 IPR036249 Thioredoxin-like superfamily YPTS_2740 IPR013740 Redoxin YPTS_2740 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPTS_2740 IPR017937 Thioredoxin, conserved site YPTS_2741 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPTS_2741 IPR002541 Cytochrome c assembly protein YPTS_2741 IPR003567 Cytochrome c-type biogenesis protein YPTS_2741 IPR003568 Cytochrome c-type biogenesis protein CcmF YPTS_2742 IPR004329 CcmE/CycJ protein YPTS_2742 IPR036127 CcmE-like superfamily YPTS_2743 IPR007078 Haem exporter protein D (CcmD) YPTS_2744 IPR003557 Cytochrome c-type biogenesis protein CcmC YPTS_2744 IPR002541 Cytochrome c assembly protein YPTS_2745 IPR003544 Cytochrome c-type biogenesis protein CcmB YPTS_2745 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPTS_2746 IPR005895 ABC transporter, haem export, CcmA YPTS_2746 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2746 IPR003593 AAA+ ATPase domain YPTS_2746 IPR003439 ABC transporter-like YPTS_2746 IPR017871 ABC transporter, conserved site YPTS_2748 IPR007156 LemA YPTS_2748 IPR023353 LemA-like domain superfamily YPTS_2750 IPR013988 PhnA protein, C-terminal YPTS_2750 IPR013987 PhnA protein, N-terminal YPTS_2750 IPR004624 PhnA protein YPTS_2756 IPR037026 Vgr protein, OB-fold domain superfamily YPTS_2756 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTS_2756 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTS_2756 IPR006531 Gp5 N-terminal YPTS_2765 IPR025949 PapC-like, C-terminal domain YPTS_2765 IPR018030 Fimbrial membrane usher, conserved site YPTS_2765 IPR000015 Outer membrane usher protein YPTS_2765 IPR037224 PapC, N-terminal domain superfamily YPTS_2765 IPR025885 PapC, N-terminal domain YPTS_2765 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_2766 IPR008962 PapD-like superfamily YPTS_2766 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_2766 IPR001829 Pili assembly chaperone, bacterial YPTS_2766 IPR018046 Pili assembly chaperone, conserved site YPTS_2766 IPR016148 Pili assembly chaperone, C-terminal YPTS_2766 IPR013783 Immunoglobulin-like fold YPTS_2766 IPR016147 Pili assembly chaperone, N-terminal YPTS_2767 IPR039458 FimA-like YPTS_2767 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_2767 IPR008966 Adhesion domain superfamily YPTS_2768 IPR041546 ClpA/ClpB, AAA lid domain YPTS_2768 IPR028299 ClpA/B, conserved site 2 YPTS_2768 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2768 IPR018368 ClpA/B, conserved site 1 YPTS_2768 IPR001270 ClpA/B family YPTS_2768 IPR003593 AAA+ ATPase domain YPTS_2768 IPR003959 ATPase, AAA-type, core YPTS_2768 IPR004176 Clp, N-terminal YPTS_2768 IPR019489 Clp ATPase, C-terminal YPTS_2768 IPR036628 Clp, N-terminal domain superfamily YPTS_2768 IPR017729 Type VI secretion system, ATPase ClpV1 YPTS_2779 IPR023346 Lysozyme-like domain superfamily YPTS_2779 IPR011757 Lytic transglycosylase MltB YPTS_2779 IPR031304 Transglycosylase SLT domain 2 YPTS_2780 IPR026045 Ferric binding protein YPTS_2780 IPR006061 Solute-binding family 1, conserved site YPTS_2781 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2781 IPR035906 MetI-like superfamily YPTS_2782 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2782 IPR017871 ABC transporter, conserved site YPTS_2782 IPR003439 ABC transporter-like YPTS_2782 IPR030287 Fe(3+) ions import ATP-binding protein FbpC YPTS_2782 IPR003593 AAA+ ATPase domain YPTS_2782 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2782 IPR015853 ABC transporter, ferric cation import, FbpC YPTS_2784 IPR008514 Type VI secretion system effector, Hcp YPTS_2784 IPR036624 Hcp1-like superfamily YPTS_2787 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_2787 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_2787 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPTS_2787 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_2787 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_2787 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_2787 IPR006656 Molybdopterin oxidoreductase YPTS_2788 IPR014297 Dimethylsulphoxide reductase, chain B YPTS_2788 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2788 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2789 IPR007059 DMSO reductase anchor subunit (DmsC) YPTS_2790 IPR026269 Tat proofreading chaperone DmsD-type YPTS_2790 IPR036411 TorD-like superfamily YPTS_2790 IPR020945 DMSO/Nitrate reductase chaperone YPTS_2790 IPR028611 Tat proofreading chaperone DmsD YPTS_2792 IPR008517 Protein of unknown function DUF799 YPTS_2794 IPR005534 Curli production assembly/transport component CsgG YPTS_2796 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTS_2796 IPR016174 Di-haem cytochrome, transmembrane YPTS_2797 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2797 IPR004839 Aminotransferase, class I/classII YPTS_2797 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2797 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2798 IPR027443 Isopenicillin N synthase-like YPTS_2798 IPR010856 Protein of unknown function DUF1479 YPTS_2799 IPR003836 Glucokinase YPTS_2801 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2801 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2801 IPR000847 Transcription regulator HTH, LysR YPTS_2801 IPR005119 LysR, substrate-binding YPTS_2802 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_2802 IPR023210 NADP-dependent oxidoreductase domain YPTS_2804 IPR001046 NRAMP family YPTS_2805 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPTS_2805 IPR011657 Concentrative nucleoside transporter C-terminal domain YPTS_2805 IPR002668 Concentrative nucleoside transporter N-terminal domain YPTS_2805 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTS_2805 IPR008276 Concentrative nucleoside transporter YPTS_2806 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPTS_2806 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPTS_2806 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPTS_2806 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPTS_2806 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_2806 IPR033910 Glutamyl-tRNA synthetase YPTS_2806 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPTS_2806 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2810 IPR024530 Putative quorum-sensing-regulated virulence factor YPTS_2811 IPR001679 NAD-dependent DNA ligase YPTS_2811 IPR013840 NAD-dependent DNA ligase, N-terminal YPTS_2811 IPR010994 RuvA domain 2-like YPTS_2811 IPR001357 BRCT domain YPTS_2811 IPR004150 NAD-dependent DNA ligase, OB-fold YPTS_2811 IPR013839 NAD-dependent DNA ligase, adenylation YPTS_2811 IPR012340 Nucleic acid-binding, OB-fold YPTS_2811 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPTS_2811 IPR018239 NAD-dependent DNA ligase, active site YPTS_2811 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPTS_2811 IPR041663 DisA/LigA, helix-hairpin-helix motif YPTS_2811 IPR036420 BRCT domain superfamily YPTS_2811 IPR033136 NAD-dependent DNA ligase, conserved site YPTS_2812 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily YPTS_2812 IPR007449 ZipA, C-terminal FtsZ-binding domain YPTS_2812 IPR011919 Cell division protein ZipA YPTS_2813 IPR022985 Sulfate transporter CysZ YPTS_2814 IPR005859 Cysteine synthase CysK YPTS_2814 IPR005856 Cysteine synthase YPTS_2814 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTS_2814 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_2814 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_2815 IPR000032 Phosphocarrier protein HPr-like YPTS_2815 IPR035895 HPr-like superfamily YPTS_2815 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTS_2815 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTS_2816 IPR006318 Phosphotransferase system, enzyme I-like YPTS_2816 IPR018274 PEP-utilising enzyme, active site YPTS_2816 IPR000121 PEP-utilising enzyme, C-terminal YPTS_2816 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTS_2816 IPR036637 Phosphohistidine domain superfamily YPTS_2816 IPR024692 Phosphotransferase system, enzyme I YPTS_2816 IPR008279 PEP-utilising enzyme, mobile domain YPTS_2816 IPR023151 PEP-utilising enzyme, conserved site YPTS_2816 IPR036618 PtsI, HPr-binding domain superfamily YPTS_2816 IPR040442 Pyruvate kinase-like domain superfamily YPTS_2816 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_2817 IPR011055 Duplicated hybrid motif YPTS_2817 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPTS_2818 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2818 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2818 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2818 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2818 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2818 IPR005467 Histidine kinase domain YPTS_2818 IPR038515 CpxA, periplasmic domain superfamily YPTS_2818 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPTS_2818 IPR003660 HAMP domain YPTS_2819 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2819 IPR001789 Signal transduction response regulator, receiver domain YPTS_2819 IPR011006 CheY-like superfamily YPTS_2819 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2819 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2820 IPR030190 Macrolide export protein MacA YPTS_2820 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_2820 IPR006143 RND efflux pump, membrane fusion protein YPTS_2821 IPR025857 MacB-like periplasmic core domain YPTS_2821 IPR003838 ABC transporter permease protein domain YPTS_2821 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2821 IPR017871 ABC transporter, conserved site YPTS_2821 IPR003593 AAA+ ATPase domain YPTS_2821 IPR003439 ABC transporter-like YPTS_2821 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPTS_2822 IPR023753 FAD/NAD(P)-binding domain YPTS_2822 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_2822 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTS_2822 IPR023536 Coenzyme A disulphide reductase, staphyolococci YPTS_2822 IPR017758 Coenzyme A disulphide reductase YPTS_2822 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTS_2823 IPR001734 Sodium/solute symporter YPTS_2823 IPR038377 Sodium/glucose symporter superfamily YPTS_2825 IPR000994 Peptidase M24 YPTS_2825 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTS_2825 IPR036005 Creatinase/aminopeptidase-like YPTS_2825 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTS_2825 IPR007865 Aminopeptidase P, N-terminal YPTS_2826 IPR004839 Aminotransferase, class I/classII YPTS_2826 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2826 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2826 IPR027619 Putative C-S lyase YPTS_2826 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2828 IPR005467 Histidine kinase domain YPTS_2828 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2828 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2828 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2828 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2828 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2828 IPR003660 HAMP domain YPTS_2829 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2829 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2829 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2829 IPR001789 Signal transduction response regulator, receiver domain YPTS_2829 IPR011006 CheY-like superfamily YPTS_2829 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2831 IPR005856 Cysteine synthase YPTS_2831 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_2831 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_2831 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTS_2831 IPR005858 Cysteine synthase CysM YPTS_2832 IPR003439 ABC transporter-like YPTS_2832 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal YPTS_2832 IPR003593 AAA+ ATPase domain YPTS_2832 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2832 IPR005666 Sulphate transport system permease protein 1 YPTS_2832 IPR017871 ABC transporter, conserved site YPTS_2832 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2833 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2833 IPR035906 MetI-like superfamily YPTS_2833 IPR005667 Sulphate ABC transporter permease protein 2 YPTS_2833 IPR011866 Sulphate ABC transporter, permease protein CysW YPTS_2834 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2834 IPR035906 MetI-like superfamily YPTS_2834 IPR005667 Sulphate ABC transporter permease protein 2 YPTS_2834 IPR011865 Sulphate ABC transporter, permease protein CysT YPTS_2835 IPR034408 Sulphate/thiosulphate-binding site YPTS_2835 IPR000957 Sulphate/thiosulphate-binding, conserved site YPTS_2835 IPR005669 Thiosulphate/Sulfate-binding protein YPTS_2836 IPR004742 Sialic acid transporter YPTS_2836 IPR011701 Major facilitator superfamily YPTS_2836 IPR020846 Major facilitator superfamily domain YPTS_2836 IPR036259 MFS transporter superfamily YPTS_2837 IPR009057 Homeobox-like domain superfamily YPTS_2837 IPR000281 Helix-turn-helix protein RpiR YPTS_2837 IPR035472 RpiR-like, SIS domain YPTS_2837 IPR001347 Sugar isomerase (SIS) YPTS_2837 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2838 IPR004375 YhcH/YjgK/YiaL family YPTS_2838 IPR037012 YhcH/YjgK/YiaL superfamily YPTS_2839 IPR023945 N-acetylmannosamine kinase, bacterial YPTS_2839 IPR000600 ROK family YPTS_2840 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTS_2840 IPR032675 Leucine-rich repeat domain superfamily YPTS_2840 IPR001611 Leucine-rich repeat YPTS_2842 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPTS_2842 IPR013785 Aldolase-type TIM barrel YPTS_2842 IPR011060 Ribulose-phosphate binding barrel YPTS_2843 IPR013785 Aldolase-type TIM barrel YPTS_2843 IPR020625 Schiff base-forming aldolase, active site YPTS_2843 IPR002220 DapA-like YPTS_2843 IPR005264 N-acetylneuraminate lyase YPTS_2844 IPR006314 Dyp-type peroxidase YPTS_2844 IPR011008 Dimeric alpha-beta barrel YPTS_2845 IPR038714 YfeY-like superfamily YPTS_2845 IPR010938 Protein of unknown function DUF1131 YPTS_2846 IPR036700 Bacterial OB-fold superfamily YPTS_2846 IPR005220 Bacterial OB-fold YPTS_2846 IPR016052 Bacteriophage 933W, L0136 YPTS_2847 IPR003991 Pertactin virulence factor family YPTS_2847 IPR004899 Pertactin, central region YPTS_2847 IPR011050 Pectin lyase fold/virulence factor YPTS_2847 IPR036709 Autotransporter beta-domain superfamily YPTS_2847 IPR024973 ESPR domain YPTS_2847 IPR005546 Autotransporter beta-domain YPTS_2847 IPR006315 Outer membrane autotransporter barrel YPTS_2847 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_2847 IPR030930 Adhesin of bacterial autotransporter system YPTS_2849 IPR016181 Acyl-CoA N-acyltransferase YPTS_2849 IPR023072 Acetyltransferase, YpeA YPTS_2849 IPR000182 GNAT domain YPTS_2853 IPR012337 Ribonuclease H-like superfamily YPTS_2853 IPR009057 Homeobox-like domain superfamily YPTS_2853 IPR038717 Tc1-like transposase, DDE domain YPTS_2853 IPR025959 Winged helix-turn helix domain YPTS_2854 IPR012337 Ribonuclease H-like superfamily YPTS_2854 IPR009057 Homeobox-like domain superfamily YPTS_2854 IPR025959 Winged helix-turn helix domain YPTS_2854 IPR038717 Tc1-like transposase, DDE domain YPTS_2855 IPR016181 Acyl-CoA N-acyltransferase YPTS_2855 IPR000182 GNAT domain YPTS_2855 IPR023072 Acetyltransferase, YpeA YPTS_2856 IPR018375 Coproporphyrinogen III oxidase, conserved site YPTS_2856 IPR001260 Coproporphyrinogen III oxidase, aerobic YPTS_2856 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily YPTS_2857 IPR003791 Protein of unknown function UPF0178 YPTS_2859 IPR012302 Malic enzyme, NAD-binding YPTS_2859 IPR037062 Malic enzyme, N-terminal domain superfamily YPTS_2859 IPR012301 Malic enzyme, N-terminal domain YPTS_2859 IPR042113 Phosphate acetyltransferase, domain 1 YPTS_2859 IPR002505 Phosphate acetyl/butaryl transferase YPTS_2859 IPR012188 NAD(P)-dependent malic enzyme YPTS_2859 IPR042112 Phosphate acetyltransferase, domain 2 YPTS_2859 IPR036291 NAD(P)-binding domain superfamily YPTS_2859 IPR015884 Malic enzyme, conserved site YPTS_2860 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_2860 IPR004385 Nucleoside diphosphate pyrophosphatase YPTS_2860 IPR000086 NUDIX hydrolase domain YPTS_2862 IPR005126 NapC/NirT cytochrome c, N-terminal YPTS_2862 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPTS_2862 IPR038266 NapC/NirT cytochrome c superfamily YPTS_2862 IPR024717 Denitrification system component NapC/NirT/NrfH YPTS_2862 IPR036280 Multiheme cytochrome superfamily YPTS_2862 IPR011031 Multihaem cytochrome YPTS_2863 IPR011031 Multihaem cytochrome YPTS_2863 IPR036280 Multiheme cytochrome superfamily YPTS_2863 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPTS_2864 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTS_2864 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_2864 IPR010051 Periplasmic nitrate reductase, large subunit YPTS_2864 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_2864 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain YPTS_2864 IPR006656 Molybdopterin oxidoreductase YPTS_2864 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPTS_2864 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_2864 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_2865 IPR005623 Chaperone NapD, nitrate reductase assembly YPTS_2866 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2866 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2866 IPR004496 Ferredoxin-type protein NapF YPTS_2867 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2867 IPR000792 Transcription regulator LuxR, C-terminal YPTS_2867 IPR011006 CheY-like superfamily YPTS_2867 IPR001789 Signal transduction response regulator, receiver domain YPTS_2869 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_2869 IPR001036 Acriflavin resistance protein YPTS_2869 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTS_2871 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPTS_2872 IPR023885 4Fe4S-binding SPASM domain YPTS_2872 IPR013785 Aldolase-type TIM barrel YPTS_2872 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPTS_2872 IPR007197 Radical SAM YPTS_2873 IPR024607 Sulfatase, conserved site YPTS_2873 IPR000917 Sulfatase, N-terminal YPTS_2873 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_2874 IPR003439 ABC transporter-like YPTS_2874 IPR017871 ABC transporter, conserved site YPTS_2874 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2874 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2874 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTS_2874 IPR003593 AAA+ ATPase domain YPTS_2874 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTS_2874 IPR013611 Transport-associated OB, type 2 YPTS_2875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2875 IPR035906 MetI-like superfamily YPTS_2878 IPR006660 Arsenate reductase-like YPTS_2878 IPR036249 Thioredoxin-like superfamily YPTS_2878 IPR006504 Transcriptional regulator Spx/MgsR YPTS_2879 IPR011650 Peptidase M20, dimerisation domain YPTS_2879 IPR002933 Peptidase M20 YPTS_2879 IPR036264 Bacterial exopeptidase dimerisation domain YPTS_2879 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTS_2879 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPTS_2880 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPTS_2880 IPR003709 Peptidase M15B YPTS_2881 IPR020910 Uncharacterised protein family UPF0370 YPTS_2883 IPR016181 Acyl-CoA N-acyltransferase YPTS_2883 IPR007807 Helicase domain YPTS_2883 IPR000182 GNAT domain YPTS_2883 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2883 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPTS_2883 IPR038321 TmcA, C-terminal domain superfamily YPTS_2883 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPTS_2883 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YPTS_2883 IPR032672 TmcA/NAT10/Kre33 YPTS_2884 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPTS_2885 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPTS_2887 IPR028923 SAICAR synthetase/ADE2, N-terminal YPTS_2887 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase YPTS_2887 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPTS_2887 IPR018236 SAICAR synthetase, conserved site YPTS_2888 IPR014524 Outer membrane protein assembly factor BamC YPTS_2888 IPR042268 Outer membrane protein assembly factor BamC, C-terminal YPTS_2888 IPR010653 NlpB/DapX lipoprotein YPTS_2889 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPTS_2889 IPR002220 DapA-like YPTS_2889 IPR020625 Schiff base-forming aldolase, active site YPTS_2889 IPR013785 Aldolase-type TIM barrel YPTS_2889 IPR020624 Schiff base-forming aldolase, conserved site YPTS_2890 IPR016867 Glycine cleavage system transcriptional repressor YPTS_2890 IPR002912 ACT domain YPTS_2891 IPR036249 Thioredoxin-like superfamily YPTS_2891 IPR013766 Thioredoxin domain YPTS_2891 IPR024706 Peroxiredoxin, AhpC-type YPTS_2891 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPTS_2894 IPR002549 Transmembrane protein TqsA-like YPTS_2895 IPR030873 Beta-barrel assembly-enhancing protease YPTS_2895 IPR001915 Peptidase M48 YPTS_2895 IPR011716 Tetratricopeptide TPR-3 YPTS_2895 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_2896 IPR006660 Arsenate reductase-like YPTS_2896 IPR006659 Arsenate reductase YPTS_2896 IPR036249 Thioredoxin-like superfamily YPTS_2897 IPR013317 Chromosomal replication initiator protein DnaA YPTS_2897 IPR017788 DnaA regulatory inactivator Hda YPTS_2897 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPTS_2897 IPR020591 Chromosomal replication control, initiator DnaA-like YPTS_2897 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2898 IPR006042 Xanthine/uracil permease YPTS_2898 IPR029935 Uracil permease YPTS_2898 IPR006043 Xanthine/uracil/vitamin C permease YPTS_2899 IPR000836 Phosphoribosyltransferase domain YPTS_2899 IPR029057 Phosphoribosyltransferase-like YPTS_2899 IPR034332 Uracil phosphoribosyltransferase, bacterial-type YPTS_2899 IPR005765 Uracil phosphoribosyl transferase YPTS_2900 IPR010918 PurM-like, C-terminal domain YPTS_2900 IPR036676 PurM-like, C-terminal domain superfamily YPTS_2900 IPR016188 PurM-like, N-terminal domain YPTS_2900 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPTS_2900 IPR036921 PurM-like, N-terminal domain superfamily YPTS_2901 IPR002376 Formyl transferase, N-terminal YPTS_2901 IPR036477 Formyl transferase, N-terminal domain superfamily YPTS_2901 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPTS_2901 IPR004607 Phosphoribosylglycinamide formyltransferase YPTS_2902 IPR000182 GNAT domain YPTS_2902 IPR016181 Acyl-CoA N-acyltransferase YPTS_2904 IPR003439 ABC transporter-like YPTS_2904 IPR017871 ABC transporter, conserved site YPTS_2904 IPR015850 ABC transporter, phosphate import, PstB YPTS_2904 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2904 IPR005670 Phosphate transport system permease protein 1 YPTS_2904 IPR003593 AAA+ ATPase domain YPTS_2905 IPR035906 MetI-like superfamily YPTS_2905 IPR005672 Phosphate transport system permease protein PstA YPTS_2905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2906 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2906 IPR011864 Phosphate ABC transporter, permease protein PstC YPTS_2906 IPR035906 MetI-like superfamily YPTS_2907 IPR041108 Polyphosphate kinase, C-terminal domain 1 YPTS_2907 IPR024953 Polyphosphate kinase middle domain YPTS_2907 IPR036830 Polyphosphate kinase middle domain superfamily YPTS_2907 IPR025200 Polyphosphate kinase C-terminal domain 2 YPTS_2907 IPR025198 Polyphosphate kinase N-terminal domain YPTS_2907 IPR036832 Polyphosphate kinase N-terminal domain superfamily YPTS_2907 IPR003414 Polyphosphate kinase YPTS_2907 IPR001736 Phospholipase D/Transphosphatidylase YPTS_2908 IPR030673 Pyrophosphatase, GppA/Ppx-type YPTS_2908 IPR003695 Ppx/GppA phosphatase YPTS_2908 IPR022371 Exopolyphosphatase YPTS_2910 IPR006668 Magnesium transporter, MgtE intracellular domain YPTS_2910 IPR000644 CBS domain YPTS_2910 IPR038076 MgtE, N-terminal domain superfamily YPTS_2910 IPR038048 Magnesium transporter MgtE, transmembrane domain YPTS_2910 IPR006669 Magnesium transporter MgtE YPTS_2910 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPTS_2910 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily YPTS_2911 IPR042054 YegD-like YPTS_2911 IPR013126 Heat shock protein 70 family YPTS_2911 IPR018181 Heat shock protein 70, conserved site YPTS_2913 IPR035906 MetI-like superfamily YPTS_2913 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2914 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_2914 IPR035906 MetI-like superfamily YPTS_2916 IPR004632 4-aminobutyrate aminotransferase, bacterial YPTS_2916 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2916 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2916 IPR005814 Aminotransferase class-III YPTS_2916 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2917 IPR004839 Aminotransferase, class I/classII YPTS_2917 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2917 IPR000524 Transcription regulator HTH, GntR YPTS_2917 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2917 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2917 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2918 IPR003593 AAA+ ATPase domain YPTS_2918 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2918 IPR013611 Transport-associated OB, type 2 YPTS_2918 IPR017871 ABC transporter, conserved site YPTS_2918 IPR003439 ABC transporter-like YPTS_2918 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPTS_2918 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPTS_2918 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_2919 IPR006143 RND efflux pump, membrane fusion protein YPTS_2919 IPR022824 Multidrug resistance protein MdtA YPTS_2919 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTS_2920 IPR022831 Multidrug resistance protein MdtB YPTS_2920 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_2920 IPR001036 Acriflavin resistance protein YPTS_2921 IPR023931 Multidrug resistance protein MdtC YPTS_2921 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_2921 IPR001036 Acriflavin resistance protein YPTS_2922 IPR020846 Major facilitator superfamily domain YPTS_2922 IPR011701 Major facilitator superfamily YPTS_2922 IPR004638 Drug resistance transporter EmrB-like YPTS_2922 IPR036259 MFS transporter superfamily YPTS_2922 IPR023721 Multidrug resistance protein MdtD YPTS_2923 IPR005467 Histidine kinase domain YPTS_2923 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2923 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2923 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2923 IPR003660 HAMP domain YPTS_2923 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2923 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2924 IPR011006 CheY-like superfamily YPTS_2924 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_2924 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_2924 IPR001789 Signal transduction response regulator, receiver domain YPTS_2924 IPR039420 Transcriptional regulatory protein WalR-like YPTS_2924 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2925 IPR036913 YegP-like superfamily YPTS_2925 IPR010879 Domain of unknown function DUF1508 YPTS_2927 IPR022433 Lipid kinase YegS YPTS_2927 IPR005218 Diacylglycerol/lipid kinase YPTS_2927 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPTS_2927 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPTS_2927 IPR001206 Diacylglycerol kinase, catalytic domain YPTS_2928 IPR036501 Inhibitor of vertebrate lysozyme superfamily YPTS_2928 IPR014453 Inhibitor of vertebrate lysozyme YPTS_2930 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPTS_2930 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPTS_2930 IPR029056 Ribokinase-like YPTS_2939 IPR008514 Type VI secretion system effector, Hcp YPTS_2939 IPR036624 Hcp1-like superfamily YPTS_2940 IPR001674 GMP synthase, C-terminal YPTS_2940 IPR004739 GMP synthase, glutamine amidotransferase YPTS_2940 IPR022955 GMP synthase YPTS_2940 IPR025777 GMP synthetase ATP pyrophosphatase domain YPTS_2940 IPR017926 Glutamine amidotransferase YPTS_2940 IPR029062 Class I glutamine amidotransferase-like YPTS_2940 IPR022310 NAD/GMP synthase YPTS_2940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2941 IPR001093 IMP dehydrogenase/GMP reductase YPTS_2941 IPR013785 Aldolase-type TIM barrel YPTS_2941 IPR000644 CBS domain YPTS_2941 IPR005990 Inosine-5'-monophosphate dehydrogenase YPTS_2941 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPTS_2942 IPR025824 OB-fold nucleic acid binding domain YPTS_2942 IPR020579 Exonuclease VII, large subunit, C-terminal YPTS_2942 IPR003753 Exonuclease VII, large subunit YPTS_2944 IPR010807 Protein of unknown function DUF1407 YPTS_2944 IPR029037 YfgJ-like YPTS_2946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2946 IPR015946 K homology domain-like, alpha/beta YPTS_2946 IPR032859 GTPase Der, C-terminal KH-domain-like YPTS_2946 IPR005225 Small GTP-binding protein domain YPTS_2946 IPR016484 GTP-binding protein EngA YPTS_2946 IPR031166 EngA-type guanine nucleotide-binding (G) domain YPTS_2946 IPR006073 GTP binding domain YPTS_2947 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPTS_2947 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPTS_2947 IPR002372 Pyrrolo-quinoline quinone repeat YPTS_2947 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPTS_2947 IPR017687 Outer membrane protein assembly factor BamB YPTS_2948 IPR018704 Tetratricopeptide repeat-like domain YPTS_2948 IPR026039 Uncharacterised protein family UPF0070 YPTS_2948 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_2949 IPR033656 Histidyl-anticodon-binding YPTS_2949 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPTS_2949 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain YPTS_2949 IPR015807 Histidine-tRNA ligase YPTS_2949 IPR004154 Anticodon-binding YPTS_2949 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_2949 IPR036621 Anticodon-binding domain superfamily YPTS_2950 IPR011005 Dihydropteroate synthase-like YPTS_2950 IPR036849 Enolase-like, C-terminal domain superfamily YPTS_2950 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPTS_2950 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPTS_2951 IPR025194 Domain of unknown function DUF4115 YPTS_2951 IPR023690 Cytoskeleton protein RodZ YPTS_2951 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_2951 IPR001387 Cro/C1-type helix-turn-helix domain YPTS_2953 IPR013785 Aldolase-type TIM barrel YPTS_2953 IPR040072 Methyltransferase (Class A) YPTS_2953 IPR027492 Dual-specificity RNA methyltransferase RlmN YPTS_2953 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPTS_2953 IPR007197 Radical SAM YPTS_2954 IPR023005 Nucleoside diphosphate kinase, active site YPTS_2954 IPR001564 Nucleoside diphosphate kinase YPTS_2954 IPR036850 Nucleoside diphosphate kinase-like domain superfamily YPTS_2954 IPR034907 Nucleoside diphosphate kinase-like domain YPTS_2957 IPR005546 Autotransporter beta-domain YPTS_2957 IPR011050 Pectin lyase fold/virulence factor YPTS_2957 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_2957 IPR006315 Outer membrane autotransporter barrel YPTS_2957 IPR036709 Autotransporter beta-domain superfamily YPTS_2957 IPR004899 Pertactin, central region YPTS_2957 IPR003991 Pertactin virulence factor family YPTS_2957 IPR030930 Adhesin of bacterial autotransporter system YPTS_2958 IPR030930 Adhesin of bacterial autotransporter system YPTS_2958 IPR005546 Autotransporter beta-domain YPTS_2958 IPR036709 Autotransporter beta-domain superfamily YPTS_2958 IPR003991 Pertactin virulence factor family YPTS_2958 IPR004899 Pertactin, central region YPTS_2958 IPR011050 Pectin lyase fold/virulence factor YPTS_2958 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_2958 IPR006315 Outer membrane autotransporter barrel YPTS_2959 IPR027945 SseB protein, C-terminal YPTS_2959 IPR009839 SseB protein N-terminal domain YPTS_2960 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPTS_2960 IPR008330 Peptidase M17, peptidase B YPTS_2960 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPTS_2960 IPR001346 Interferon regulatory factor DNA-binding domain YPTS_2961 IPR036762 IscX-like superfamily YPTS_2961 IPR007479 ISC system FeS cluster assembly, IscX YPTS_2962 IPR036010 2Fe-2S ferredoxin-like superfamily YPTS_2962 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria YPTS_2962 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPTS_2962 IPR001055 Adrenodoxin YPTS_2962 IPR018298 Adrenodoxin, iron-sulphur binding site YPTS_2962 IPR012675 Beta-grasp domain superfamily YPTS_2963 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPTS_2963 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPTS_2963 IPR018181 Heat shock protein 70, conserved site YPTS_2963 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPTS_2963 IPR042039 HscA chaperone, nucleotide-binding domain YPTS_2963 IPR013126 Heat shock protein 70 family YPTS_2964 IPR001623 DnaJ domain YPTS_2964 IPR004640 Co-chaperone Hsc20 YPTS_2964 IPR036386 HscB, C-terminal domain superfamily YPTS_2964 IPR036869 Chaperone J-domain superfamily YPTS_2964 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPTS_2965 IPR016092 FeS cluster insertion protein YPTS_2965 IPR035903 HesB-like domain superfamily YPTS_2965 IPR011302 Iron-binding protein IscA, proteobacteria YPTS_2965 IPR017870 FeS cluster insertion, C-terminal, conserved site YPTS_2965 IPR000361 FeS cluster biogenesis YPTS_2966 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPTS_2966 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPTS_2967 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_2967 IPR000192 Aminotransferase class V domain YPTS_2967 IPR016454 Cysteine desulfurase YPTS_2967 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2967 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2967 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2967 IPR010240 Cysteine desulfurase IscS YPTS_2968 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2968 IPR010242 Transcription factor HTH, IscR YPTS_2968 IPR036390 Winged helix DNA-binding domain superfamily YPTS_2968 IPR000944 Transcription regulator Rrf2-type YPTS_2968 IPR030489 Transcription regulator Rrf2-type, conserved site YPTS_2969 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_2969 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPTS_2969 IPR029028 Alpha/beta knot methyltransferases YPTS_2969 IPR004384 RNA methyltransferase TrmJ/LasT YPTS_2970 IPR022337 Inositol monophosphatase, SuhB YPTS_2970 IPR000760 Inositol monophosphatase-like YPTS_2970 IPR033942 Inositol monophosphatase YPTS_2970 IPR020550 Inositol monophosphatase, conserved site YPTS_2970 IPR020583 Inositol monophosphatase, metal-binding site YPTS_2971 IPR011541 Nickel/cobalt transporter, high-affinity YPTS_2972 IPR010412 Protein of unknown function DUF1007 YPTS_2972 IPR016537 Uncharacterised conserved protein UCP008159, YPTS_2973 IPR011608 PRD domain YPTS_2973 IPR036634 PRD domain superfamily YPTS_2974 IPR024989 Major facilitator superfamily associated domain YPTS_2974 IPR036259 MFS transporter superfamily YPTS_2974 IPR026032 Probable 3-phenylpropionic acid transporter YPTS_2975 IPR000758 Virulence-related outer membrane protein YPTS_2975 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_2975 IPR027385 Outer membrane protein beta-barrel domain YPTS_2978 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_2978 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_2978 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPTS_2978 IPR001085 Serine hydroxymethyltransferase YPTS_2978 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_2978 IPR039429 Serine hydroxymethyltransferase-like domain YPTS_2979 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_2979 IPR009050 Globin-like superfamily YPTS_2979 IPR012292 Globin/Protoglobin YPTS_2979 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPTS_2979 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPTS_2979 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPTS_2979 IPR017938 Riboflavin synthase-like beta-barrel YPTS_2979 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_2979 IPR023950 Flavohemoprotein YPTS_2979 IPR000971 Globin YPTS_2980 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YPTS_2980 IPR041444 YhfZ, helix-turn-helix domain YPTS_2981 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPTS_2981 IPR002187 Nitrogen regulatory protein PII YPTS_2981 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPTS_2981 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPTS_2981 IPR017918 Nitrogen regulatory protein PII, conserved site YPTS_2982 IPR003694 NAD(+) synthetase YPTS_2982 IPR000132 Nitrilase/cyanide hydratase, conserved site YPTS_2982 IPR022310 NAD/GMP synthase YPTS_2982 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_2982 IPR014445 Glutamine-dependent NAD(+) synthetase YPTS_2982 IPR036526 Carbon-nitrogen hydrolase superfamily YPTS_2982 IPR003010 Carbon-nitrogen hydrolase YPTS_2984 IPR001789 Signal transduction response regulator, receiver domain YPTS_2984 IPR025944 Sigma-54 interaction domain, conserved site YPTS_2984 IPR003593 AAA+ ATPase domain YPTS_2984 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_2984 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_2984 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_2984 IPR011006 CheY-like superfamily YPTS_2984 IPR009057 Homeobox-like domain superfamily YPTS_2984 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_2985 IPR025262 Quorum-sensing regulator protein G YPTS_2986 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_2986 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_2986 IPR005467 Histidine kinase domain YPTS_2986 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_2986 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_2986 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_2990 IPR017926 Glutamine amidotransferase YPTS_2990 IPR010073 Phosphoribosylformylglycinamidine synthase PurL YPTS_2990 IPR036921 PurM-like, N-terminal domain superfamily YPTS_2990 IPR036676 PurM-like, C-terminal domain superfamily YPTS_2990 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily YPTS_2990 IPR010918 PurM-like, C-terminal domain YPTS_2990 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain YPTS_2990 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal YPTS_2990 IPR029062 Class I glutamine amidotransferase-like YPTS_2991 IPR000189 Prokaryotic transglycosylase, active site YPTS_2991 IPR023346 Lysozyme-like domain superfamily YPTS_2991 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_2991 IPR023703 Membrane-bound lytic murein transglycosylase F YPTS_2991 IPR008258 Transglycosylase SLT domain 1 YPTS_2992 IPR016193 Cytidine deaminase-like YPTS_2992 IPR016192 APOBEC/CMP deaminase, zinc-binding YPTS_2992 IPR028883 tRNA-specific adenosine deaminase YPTS_2992 IPR002125 Cytidine and deoxycytidylate deaminase domain YPTS_2993 IPR023214 HAD superfamily YPTS_2993 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPTS_2993 IPR036412 HAD-like superfamily YPTS_2994 IPR009060 UBA-like superfamily YPTS_2994 IPR001347 Sugar isomerase (SIS) YPTS_2994 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPTS_2994 IPR005486 Glucokinase regulatory protein, conserved site YPTS_2994 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein YPTS_2995 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_2995 IPR000281 Helix-turn-helix protein RpiR YPTS_2995 IPR035472 RpiR-like, SIS domain YPTS_2995 IPR009057 Homeobox-like domain superfamily YPTS_2995 IPR001347 Sugar isomerase (SIS) YPTS_2996 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_2996 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_2997 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPTS_2997 IPR008278 4'-phosphopantetheinyl transferase domain YPTS_2997 IPR002582 Holo-[acyl carrier protein] synthase YPTS_2997 IPR004568 Phosphopantetheine-protein transferase domain YPTS_2998 IPR036130 Pyridoxine 5'-phosphate synthase YPTS_2998 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPTS_2998 IPR013785 Aldolase-type TIM barrel YPTS_2999 IPR003717 Recombination protein O, RecO YPTS_2999 IPR012340 Nucleic acid-binding, OB-fold YPTS_2999 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPTS_2999 IPR037278 ARFGAP/RecO-like zinc finger YPTS_3000 IPR030388 Era-type guanine nucleotide-binding (G) domain YPTS_3000 IPR006073 GTP binding domain YPTS_3000 IPR015946 K homology domain-like, alpha/beta YPTS_3000 IPR005225 Small GTP-binding protein domain YPTS_3000 IPR004044 K Homology domain, type 2 YPTS_3000 IPR005662 GTP-binding protein Era YPTS_3000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3000 IPR009019 K homology domain superfamily, prokaryotic type YPTS_3001 IPR000999 Ribonuclease III domain YPTS_3001 IPR014720 Double-stranded RNA-binding domain YPTS_3001 IPR011907 Ribonuclease III YPTS_3001 IPR036389 Ribonuclease III, endonuclease domain superfamily YPTS_3002 IPR019533 Peptidase S26 YPTS_3002 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPTS_3002 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPTS_3002 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPTS_3002 IPR000223 Peptidase S26A, signal peptidase I YPTS_3002 IPR036286 LexA/Signal peptidase-like superfamily YPTS_3003 IPR000640 Elongation factor EFG, domain V-like YPTS_3003 IPR013842 GTP-binding protein LepA, C-terminal YPTS_3003 IPR038363 LepA, C-terminal domain superfamily YPTS_3003 IPR031157 Tr-type G domain, conserved site YPTS_3003 IPR035647 EF-G domain III/V-like YPTS_3003 IPR000795 Transcription factor, GTP-binding domain YPTS_3003 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3003 IPR005225 Small GTP-binding protein domain YPTS_3003 IPR035654 Elongation factor 4, domain IV YPTS_3003 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_3003 IPR006297 Elongation factor 4 YPTS_3005 IPR007359 Positive regulator of sigma(E), RseC/MucC YPTS_3005 IPR026268 Protein RseC YPTS_3006 IPR038484 MucB/RseB, C-terminal domain superfamily YPTS_3006 IPR033436 MucB/RseB, C-terminal YPTS_3006 IPR033434 MucB/RseB, N-terminal YPTS_3006 IPR005588 MucB/RseB YPTS_3007 IPR005572 Anti sigma-E protein RseA, N-terminal YPTS_3007 IPR005573 Anti sigma-E protein RseA, C-terminal YPTS_3007 IPR026279 Sigma-E factor negative regulatory protein RseA YPTS_3007 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily YPTS_3008 IPR039425 RNA polymerase sigma-70 like YPTS_3008 IPR014284 RNA polymerase sigma-70 like domain YPTS_3008 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPTS_3008 IPR007627 RNA polymerase sigma-70 region 2 YPTS_3008 IPR014286 RNA polymerase sigma-70 RpoE type YPTS_3008 IPR013325 RNA polymerase sigma factor, region 2 YPTS_3008 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_3008 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPTS_3008 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3009 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPTS_3009 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPTS_3009 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3009 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPTS_3009 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPTS_3009 IPR005288 L-aspartate oxidase YPTS_3010 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_3010 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPTS_3010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3010 IPR007848 Methyltransferase small domain YPTS_3011 IPR028621 ATP-dependent RNA helicase SrmB YPTS_3011 IPR011545 DEAD/DEAH box helicase domain YPTS_3011 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPTS_3011 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3011 IPR001650 Helicase, C-terminal YPTS_3011 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_3011 IPR014014 RNA helicase, DEAD-box type, Q motif YPTS_3013 IPR036770 Ankyrin repeat-containing domain superfamily YPTS_3013 IPR020683 Ankyrin repeat-containing domain YPTS_3013 IPR002110 Ankyrin repeat YPTS_3015 IPR029058 Alpha/Beta hydrolase fold YPTS_3016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPTS_3016 IPR001150 Glycine radical domain YPTS_3016 IPR011140 Autonomous glycyl radical cofactor GrcA YPTS_3017 IPR036895 Uracil-DNA glycosylase-like domain superfamily YPTS_3017 IPR002043 Uracil-DNA glycosylase family 1 YPTS_3017 IPR005122 Uracil-DNA glycosylase-like YPTS_3017 IPR018085 Uracil-DNA glycosylase, active site YPTS_3018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPTS_3018 IPR033693 Pyroglutamyl peptidase I, Glu active site YPTS_3018 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPTS_3018 IPR033694 Pyroglutamyl peptidase I, Cys active site YPTS_3018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily YPTS_3018 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPTS_3021 IPR005501 LamB/YcsF/PxpA-like YPTS_3021 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_3022 IPR029000 Cyclophilin-like domain superfamily YPTS_3022 IPR003778 Carboxyltransferase domain, subdomain A and B YPTS_3023 IPR003833 Carboxyltransferase domain, subdomain C and D YPTS_3023 IPR029000 Cyclophilin-like domain superfamily YPTS_3023 IPR010016 KipI family YPTS_3025 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YPTS_3025 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPTS_3026 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPTS_3026 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_3026 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPTS_3027 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPTS_3027 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPTS_3027 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily YPTS_3027 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily YPTS_3027 IPR006050 DNA photolyase, N-terminal YPTS_3027 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_3027 IPR002081 Cryptochrome/DNA photolyase class 1 YPTS_3028 IPR013560 Domain of unknown function DUF1722 YPTS_3030 IPR019663 Uncharacterised protein YbfA YPTS_3031 IPR004623 Potassium-transporting ATPase A chain YPTS_3032 IPR018303 P-type ATPase, phosphorylation site YPTS_3032 IPR023298 P-type ATPase, transmembrane domain superfamily YPTS_3032 IPR008250 P-type ATPase, A domain superfamily YPTS_3032 IPR036412 HAD-like superfamily YPTS_3032 IPR006391 P-type ATPase, B chain, subfamily IA YPTS_3032 IPR001757 P-type ATPase YPTS_3032 IPR023299 P-type ATPase, cytoplasmic domain N YPTS_3033 IPR003820 Potassium-transporting ATPase C chain YPTS_3034 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPTS_3034 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3034 IPR005467 Histidine kinase domain YPTS_3034 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_3034 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_3034 IPR038318 KdpD, transmembrane domain superfamily YPTS_3034 IPR025201 Sensor protein KdpD, transmembrane domain YPTS_3034 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_3034 IPR029016 GAF-like domain superfamily YPTS_3034 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_3034 IPR003018 GAF domain YPTS_3035 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3035 IPR039420 Transcriptional regulatory protein WalR-like YPTS_3035 IPR001789 Signal transduction response regulator, receiver domain YPTS_3035 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_3035 IPR011006 CheY-like superfamily YPTS_3039 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPTS_3039 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPTS_3039 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPTS_3039 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPTS_3039 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPTS_3039 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPTS_3039 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPTS_3039 IPR016066 Alpha-D-phosphohexomutase, conserved site YPTS_3040 IPR005621 Negative modulator of initiation of replication SeqA YPTS_3040 IPR010985 Ribbon-helix-helix YPTS_3040 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPTS_3040 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily YPTS_3040 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal YPTS_3040 IPR013321 Arc-type ribbon-helix-helix YPTS_3043 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPTS_3043 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria YPTS_3043 IPR006879 Carbohydrate deacetylase YdjC-like YPTS_3044 IPR009057 Homeobox-like domain superfamily YPTS_3044 IPR018060 DNA binding HTH domain, AraC-type YPTS_3044 IPR018062 HTH domain AraC-type, conserved site YPTS_3044 IPR014710 RmlC-like jelly roll fold YPTS_3044 IPR011051 RmlC-like cupin domain superfamily YPTS_3044 IPR020449 Transcription regulator HTH, AraC- type YPTS_3044 IPR013096 Cupin 2, conserved barrel YPTS_3045 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit YPTS_3045 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily YPTS_3046 IPR004501 Phosphotransferase system, EIIC component, type 3 YPTS_3046 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPTS_3046 IPR003352 Phosphotransferase system, EIIC YPTS_3047 IPR036095 PTS system IIB component-like superfamily YPTS_3047 IPR013012 Phosphotransferase system, EIIB component, type 3 YPTS_3047 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTS_3048 IPR003691 Putative fluoride ion transporter CrcB YPTS_3049 IPR003691 Putative fluoride ion transporter CrcB YPTS_3050 IPR036291 NAD(P)-binding domain superfamily YPTS_3050 IPR003148 Regulator of K+ conductance, N-terminal YPTS_3050 IPR013099 Potassium channel domain YPTS_3051 IPR010486 HNS-dependent expression A/B YPTS_3051 IPR028623 HNS-dependent expression B YPTS_3051 IPR038303 HNS-dependent expression A/B superfamily YPTS_3052 IPR011541 Nickel/cobalt transporter, high-affinity YPTS_3052 IPR004688 Transition metal uptake transporter nickel/cobalt YPTS_3053 IPR029020 Ammonium/urea transporter YPTS_3053 IPR004937 Urea transporter YPTS_3054 IPR002669 Urease accessory protein UreD YPTS_3055 IPR004400 Urease accessory protein UreG YPTS_3055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3055 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPTS_3056 IPR038277 UreF domain superfamily YPTS_3056 IPR002639 Urease accessory protein UreF YPTS_3057 IPR007864 Urease accessory protein UreE, C-terminal domain YPTS_3057 IPR004029 UreE urease accessory, N-terminal YPTS_3057 IPR012406 Urease accessory protein UreE YPTS_3057 IPR036118 UreE urease accessory, N-terminal domain superfamily YPTS_3058 IPR029754 Urease nickel binding site YPTS_3058 IPR017951 Urease alpha subunit, C-terminal YPTS_3058 IPR005848 Urease, alpha subunit YPTS_3058 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_3058 IPR017950 Urease active site YPTS_3058 IPR011612 Urease alpha-subunit, N-terminal domain YPTS_3058 IPR006680 Amidohydrolase-related YPTS_3058 IPR032466 Metal-dependent hydrolase YPTS_3059 IPR002019 Urease, beta subunit YPTS_3059 IPR036461 Urease, beta subunit superfamily YPTS_3060 IPR002026 Urease, gamma/gamma-beta subunit YPTS_3060 IPR012010 Urease, gamma subunit YPTS_3060 IPR036463 Urease, gamma subunit superfamily YPTS_3062 IPR003593 AAA+ ATPase domain YPTS_3062 IPR014137 Nickel import ATP-binding protein NikE YPTS_3062 IPR015858 ABC transporter, nickel import, NikE YPTS_3062 IPR017871 ABC transporter, conserved site YPTS_3062 IPR003439 ABC transporter-like YPTS_3062 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3063 IPR017871 ABC transporter, conserved site YPTS_3063 IPR015863 ABC transporter, hemin import, HmuV YPTS_3063 IPR003593 AAA+ ATPase domain YPTS_3063 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3063 IPR003439 ABC transporter-like YPTS_3064 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3064 IPR035906 MetI-like superfamily YPTS_3064 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_3065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3065 IPR035906 MetI-like superfamily YPTS_3066 IPR023765 Solute-binding protein family 5, conserved site YPTS_3066 IPR039424 Solute-binding protein family 5 YPTS_3066 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_3066 IPR000914 Solute-binding protein family 5 domain YPTS_3066 IPR011980 Nickel ABC transporter, substrate-binding protein NikA YPTS_3067 IPR012156 Cold shock, CspA YPTS_3067 IPR012340 Nucleic acid-binding, OB-fold YPTS_3067 IPR011129 Cold shock domain YPTS_3067 IPR019844 Cold-shock (CSD) domain YPTS_3067 IPR002059 Cold-shock protein, DNA-binding YPTS_3069 IPR009587 Protein of unknown function DUF1198 YPTS_3070 IPR018994 Protein of unknown function DUF2002 YPTS_3071 IPR009435 Acid shock YPTS_3071 IPR023497 Acid shock protein YPTS_3073 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPTS_3073 IPR029039 Flavoprotein-like superfamily YPTS_3073 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPTS_3074 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPTS_3074 IPR013554 Ribonucleotide reductase N-terminal YPTS_3074 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPTS_3074 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPTS_3074 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPTS_3074 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPTS_3074 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPTS_3075 IPR030475 Ribonucleotide reductase small subunit, acitve site YPTS_3075 IPR009078 Ferritin-like superfamily YPTS_3075 IPR012348 Ribonucleotide reductase-like YPTS_3075 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPTS_3075 IPR000358 Ribonucleotide reductase small subunit family YPTS_3075 IPR033909 Ribonucleotide reductase small subunit YPTS_3076 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3076 IPR003593 AAA+ ATPase domain YPTS_3076 IPR000644 CBS domain YPTS_3076 IPR017871 ABC transporter, conserved site YPTS_3076 IPR005892 Glycine betaine transport ATP-binding subunit YPTS_3076 IPR003439 ABC transporter-like YPTS_3077 IPR035906 MetI-like superfamily YPTS_3077 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3078 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTS_3081 IPR012681 Nucleobase cation symporter-1, NCS1 YPTS_3081 IPR001248 Purine-cytosine permease YPTS_3081 IPR038271 Purine-cytosine permease superfamily YPTS_3082 IPR013520 Exonuclease, RNase T/DNA polymerase III YPTS_3082 IPR006309 DNA polymerase 3, epsilon subunit YPTS_3082 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPTS_3082 IPR036397 Ribonuclease H superfamily YPTS_3082 IPR012337 Ribonuclease H-like superfamily YPTS_3083 IPR002156 Ribonuclease H domain YPTS_3083 IPR022892 Ribonuclease HI YPTS_3083 IPR036397 Ribonuclease H superfamily YPTS_3083 IPR012337 Ribonuclease H-like superfamily YPTS_3084 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3084 IPR026669 Arsenite methyltransferase-like YPTS_3084 IPR013216 Methyltransferase type 11 YPTS_3085 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain YPTS_3085 IPR017782 Hydroxyacylglutathione hydrolase YPTS_3085 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain YPTS_3085 IPR001279 Metallo-beta-lactamase YPTS_3085 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_3086 IPR023346 Lysozyme-like domain superfamily YPTS_3086 IPR000189 Prokaryotic transglycosylase, active site YPTS_3086 IPR008258 Transglycosylase SLT domain 1 YPTS_3086 IPR036779 LysM domain superfamily YPTS_3086 IPR018392 LysM domain YPTS_3087 IPR022958 Uncharacterised protein family UPF0294 YPTS_3087 IPR005135 Endonuclease/exonuclease/phosphatase YPTS_3087 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPTS_3089 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_3089 IPR023210 NADP-dependent oxidoreductase domain YPTS_3089 IPR020471 Aldo/keto reductase YPTS_3089 IPR018170 Aldo/keto reductase, conserved site YPTS_3092 IPR006543 Histidinol-phosphate phosphatase YPTS_3092 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPTS_3092 IPR036412 HAD-like superfamily YPTS_3092 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPTS_3092 IPR023214 HAD superfamily YPTS_3093 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3093 IPR003439 ABC transporter-like YPTS_3093 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPTS_3093 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPTS_3093 IPR017871 ABC transporter, conserved site YPTS_3093 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPTS_3093 IPR003593 AAA+ ATPase domain YPTS_3093 IPR026253 Methionine import ATP-binding protein MetN YPTS_3093 IPR018449 NIL domain YPTS_3094 IPR035906 MetI-like superfamily YPTS_3094 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3095 IPR004872 Lipoprotein NlpA family YPTS_3096 IPR030852 Outer membrane lipoprotein RcsF YPTS_3097 IPR036413 YaeB-like superfamily YPTS_3097 IPR023368 Uncharacterised protein family UPF0066, conserved site YPTS_3097 IPR041369 TrmO, C-terminal YPTS_3097 IPR023370 TrmO-like, N-terminal domain YPTS_3097 IPR036414 YaeB, N-terminal domain superfamily YPTS_3097 IPR040372 YaeB-like YPTS_3098 IPR004154 Anticodon-binding YPTS_3098 IPR036621 Anticodon-binding domain superfamily YPTS_3098 IPR002316 Proline-tRNA ligase, class IIa YPTS_3098 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPTS_3098 IPR033730 Prokaryote proline-tRNA ligase core domain YPTS_3098 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPTS_3098 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPTS_3098 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPTS_3098 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_3098 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPTS_3099 IPR038139 NlpE, C-terminal domain superfamily YPTS_3099 IPR033450 NlpE, C-terminal OB domain YPTS_3099 IPR007298 Copper resistance lipoprotein NlpE YPTS_3100 IPR000352 Peptide chain release factor class I YPTS_3101 IPR038590 YaeQ superfamily YPTS_3101 IPR009822 YaeQ YPTS_3101 IPR011335 Restriction endonuclease type II-like YPTS_3102 IPR009624 Uncharacterised protein family UPF0253 YPTS_3103 IPR009778 Modulator of Rho-dependent transcription termination YPTS_3103 IPR038626 Rof-like superfamily YPTS_3103 IPR023534 Rof/RNase P-like YPTS_3104 IPR008168 Cytochrome c, class IC YPTS_3104 IPR036909 Cytochrome c-like domain superfamily YPTS_3104 IPR009056 Cytochrome c-like domain YPTS_3105 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPTS_3105 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain YPTS_3105 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal YPTS_3105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_3105 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPTS_3105 IPR012094 tRNA(Ile)-lysidine synthase YPTS_3106 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPTS_3106 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPTS_3106 IPR037478 YwkD-like domain YPTS_3106 IPR037523 Vicinal oxygen chelate (VOC) domain YPTS_3107 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal YPTS_3107 IPR029045 ClpP/crotonase-like domain superfamily YPTS_3107 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPTS_3108 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain YPTS_3108 IPR040982 DNA polymerase III alpha subunit finger domain YPTS_3108 IPR029460 DNA polymerase, helix-hairpin-helix motif YPTS_3108 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTS_3108 IPR016195 Polymerase/histidinol phosphatase-like YPTS_3108 IPR004805 DNA polymerase III, alpha subunit YPTS_3108 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain YPTS_3108 IPR004013 PHP domain YPTS_3108 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPTS_3109 IPR022898 Ribonuclease HII YPTS_3109 IPR024567 Ribonuclease HII/HIII domain YPTS_3109 IPR001352 Ribonuclease HII/HIII YPTS_3109 IPR036397 Ribonuclease H superfamily YPTS_3109 IPR012337 Ribonuclease H-like superfamily YPTS_3110 IPR003835 Glycosyl transferase, family 19 YPTS_3111 IPR018357 Hexapeptide transferase, conserved site YPTS_3111 IPR001451 Hexapeptide repeat YPTS_3111 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily YPTS_3111 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal YPTS_3111 IPR011004 Trimeric LpxA-like superfamily YPTS_3111 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPTS_3112 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPTS_3112 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPTS_3112 IPR029069 HotDog domain superfamily YPTS_3113 IPR018357 Hexapeptide transferase, conserved site YPTS_3113 IPR011004 Trimeric LpxA-like superfamily YPTS_3113 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPTS_3113 IPR001451 Hexapeptide repeat YPTS_3113 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD YPTS_3114 IPR005632 Chaperone protein Skp YPTS_3114 IPR024930 Skp domain superfamily YPTS_3115 IPR034746 POTRA domain YPTS_3115 IPR023707 Outer membrane protein assembly factor BamA YPTS_3115 IPR039910 Surface antigen D15-like YPTS_3115 IPR010827 POTRA domain, BamA/TamA-like YPTS_3115 IPR000184 Bacterial surface antigen (D15) YPTS_3116 IPR008915 Peptidase M50 YPTS_3116 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPTS_3116 IPR036034 PDZ superfamily YPTS_3116 IPR041489 PDZ domain 6 YPTS_3116 IPR001478 PDZ domain YPTS_3117 IPR000374 Phosphatidate cytidylyltransferase YPTS_3118 IPR001441 Decaprenyl diphosphate synthase-like YPTS_3118 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPTS_3118 IPR036424 Decaprenyl diphosphate synthase-like superfamily YPTS_3119 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPTS_3119 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPTS_3119 IPR026877 DXP reductoisomerase C-terminal domain YPTS_3119 IPR036291 NAD(P)-binding domain superfamily YPTS_3119 IPR036169 DXP reductoisomerase, C-terminal domain superfamily YPTS_3119 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPTS_3120 IPR036191 RRF superfamily YPTS_3120 IPR023584 Ribosome recycling factor domain YPTS_3120 IPR002661 Ribosome recycling factor YPTS_3121 IPR036393 Acetylglutamate kinase-like superfamily YPTS_3121 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_3121 IPR011817 Uridylate kinase YPTS_3121 IPR015963 Uridylate kinase, bacteria YPTS_3122 IPR009060 UBA-like superfamily YPTS_3122 IPR001816 Translation elongation factor EFTs/EF1B YPTS_3122 IPR018101 Translation elongation factor Ts, conserved site YPTS_3122 IPR036402 Elongation factor Ts, dimerisation domain superfamily YPTS_3122 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPTS_3123 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YPTS_3123 IPR001865 Ribosomal protein S2 YPTS_3123 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPTS_3123 IPR018130 Ribosomal protein S2, conserved site YPTS_3124 IPR000994 Peptidase M24 YPTS_3124 IPR001714 Peptidase M24, methionine aminopeptidase YPTS_3124 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPTS_3124 IPR036005 Creatinase/aminopeptidase-like YPTS_3125 IPR003607 HD/PDEase domain YPTS_3125 IPR002912 ACT domain YPTS_3125 IPR002934 Polymerase, nucleotidyl transferase domain YPTS_3125 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme YPTS_3125 IPR006674 HD domain YPTS_3125 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPTS_3126 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPTS_3126 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily YPTS_3126 IPR011004 Trimeric LpxA-like superfamily YPTS_3126 IPR018357 Hexapeptide transferase, conserved site YPTS_3126 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPTS_3126 IPR001451 Hexapeptide repeat YPTS_3127 IPR020911 Uncharacterised protein family UPF0325 YPTS_3128 IPR008254 Flavodoxin/nitric oxide synthase YPTS_3128 IPR001094 Flavodoxin-like YPTS_3128 IPR029039 Flavoprotein-like superfamily YPTS_3129 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPTS_3129 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPTS_3129 IPR006145 Pseudouridine synthase, RsuA/RluA YPTS_3130 IPR036814 YqcC-like superfamily YPTS_3130 IPR023376 YqcC-like domain YPTS_3130 IPR007384 Protein of unknown function UCP006257 YPTS_3132 IPR009948 Syd YPTS_3132 IPR038228 Syd superfamily YPTS_3133 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPTS_3133 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPTS_3133 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPTS_3134 IPR021826 Domain of unknown function DUF3412 YPTS_3134 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal YPTS_3134 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily YPTS_3134 IPR031100 LOG family YPTS_3135 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPTS_3135 IPR008918 Helix-hairpin-helix motif, class 2 YPTS_3135 IPR029060 PIN-like domain superfamily YPTS_3135 IPR022895 Flap endonuclease Xni YPTS_3135 IPR002421 5'-3' exonuclease, N-terminal YPTS_3135 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPTS_3135 IPR038969 Flap endonuclease YPTS_3135 IPR020045 DNA polymerase I-like, H3TH domain YPTS_3136 IPR040739 RlmM ferredoxin-like domain YPTS_3136 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPTS_3136 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3136 IPR011224 Ribosomal RNA large subunit methyltransferase M YPTS_3137 IPR006696 Protein of unknown function DUF423 YPTS_3138 IPR005119 LysR, substrate-binding YPTS_3138 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3138 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3138 IPR000847 Transcription regulator HTH, LysR YPTS_3140 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_3140 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_3140 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPTS_3140 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPTS_3140 IPR000192 Aminotransferase class V domain YPTS_3140 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_3141 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPTS_3141 IPR003808 Fe-S metabolism associated domain, SufE-like YPTS_3142 IPR000594 THIF-type NAD/FAD binding fold YPTS_3142 IPR035985 Ubiquitin-activating enzyme YPTS_3143 IPR026044 Membrane-bound lytic murein transglycosylase A YPTS_3143 IPR034654 MltA, 3D domain YPTS_3143 IPR005300 Lytic transglycosylase MltA, domain B YPTS_3143 IPR036908 RlpA-like domain superfamily YPTS_3143 IPR010611 3D domain YPTS_3144 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPTS_3144 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_3144 IPR021731 AMIN domain YPTS_3145 IPR016181 Acyl-CoA N-acyltransferase YPTS_3145 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_3145 IPR000182 GNAT domain YPTS_3145 IPR033719 N-acetylglutamate synthase, kinase-like domain YPTS_3145 IPR010167 Amino-acid N-acetyltransferase YPTS_3145 IPR036393 Acetylglutamate kinase-like superfamily YPTS_3146 IPR003593 AAA+ ATPase domain YPTS_3146 IPR027785 UvrD-like helicase C-terminal domain YPTS_3146 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain YPTS_3146 IPR006344 RecBCD enzyme subunit RecD YPTS_3146 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3147 IPR004586 RecBCD enzyme subunit RecB YPTS_3147 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YPTS_3147 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3147 IPR034739 UvrD/AddA helicase, N-terminal YPTS_3147 IPR000212 DNA helicase, UvrD/REP type YPTS_3147 IPR014017 UvrD-like DNA helicase, C-terminal YPTS_3147 IPR011335 Restriction endonuclease type II-like YPTS_3147 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPTS_3147 IPR014016 UvrD-like helicase, ATP-binding domain YPTS_3148 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTS_3148 IPR001431 Peptidase M16, zinc-binding site YPTS_3148 IPR007863 Peptidase M16, C-terminal YPTS_3148 IPR011765 Peptidase M16, N-terminal YPTS_3148 IPR032632 Peptidase M16, middle/third domain YPTS_3149 IPR011335 Restriction endonuclease type II-like YPTS_3149 IPR041500 RecC, C-terminal YPTS_3149 IPR006697 RecBCD enzyme subunit RecC YPTS_3149 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3149 IPR013986 DExx box DNA helicase domain superfamily YPTS_3155 IPR020940 Thymidylate synthase, active site YPTS_3155 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPTS_3155 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily YPTS_3155 IPR000398 Thymidylate synthase YPTS_3156 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt YPTS_3157 IPR036618 PtsI, HPr-binding domain superfamily YPTS_3157 IPR006318 Phosphotransferase system, enzyme I-like YPTS_3157 IPR036637 Phosphohistidine domain superfamily YPTS_3157 IPR023151 PEP-utilising enzyme, conserved site YPTS_3157 IPR000121 PEP-utilising enzyme, C-terminal YPTS_3157 IPR018274 PEP-utilising enzyme, active site YPTS_3157 IPR003018 GAF domain YPTS_3157 IPR040442 Pyruvate kinase-like domain superfamily YPTS_3157 IPR029016 GAF-like domain superfamily YPTS_3157 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_3157 IPR008279 PEP-utilising enzyme, mobile domain YPTS_3157 IPR008731 Phosphotransferase system, enzyme I N-terminal YPTS_3158 IPR000086 NUDIX hydrolase domain YPTS_3158 IPR020084 NUDIX hydrolase, conserved site YPTS_3158 IPR022927 RNA pyrophosphohydrolase RppH YPTS_3158 IPR020476 NUDIX hydrolase YPTS_3158 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_3159 IPR004230 DNA mismatch repair protein MutH YPTS_3159 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPTS_3159 IPR011335 Restriction endonuclease type II-like YPTS_3159 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily YPTS_3160 IPR020471 Aldo/keto reductase YPTS_3160 IPR023210 NADP-dependent oxidoreductase domain YPTS_3160 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_3163 IPR023727 Lysophospholipid transporter LplT YPTS_3163 IPR036259 MFS transporter superfamily YPTS_3163 IPR011701 Major facilitator superfamily YPTS_3164 IPR020845 AMP-binding, conserved site YPTS_3164 IPR025110 AMP-binding enzyme, C-terminal domain YPTS_3164 IPR000873 AMP-dependent synthetase/ligase YPTS_3164 IPR023775 Bifunctional protein Aas YPTS_3164 IPR042099 AMP-dependent synthetase-like superfamily YPTS_3164 IPR002123 Phospholipid/glycerol acyltransferase YPTS_3165 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_3165 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase YPTS_3165 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_3165 IPR006656 Molybdopterin oxidoreductase YPTS_3165 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_3166 IPR000843 LacI-type HTH domain YPTS_3166 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3166 IPR028082 Periplasmic binding protein-like I YPTS_3167 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPTS_3167 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPTS_3167 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPTS_3167 IPR029066 PLP-binding barrel YPTS_3167 IPR000183 Ornithine/DAP/Arg decarboxylase YPTS_3167 IPR002986 Diaminopimelate decarboxylase, LysA YPTS_3167 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTS_3167 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPTS_3168 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3168 IPR037414 Transcriptional activator protein LysR, PBP2 domain YPTS_3168 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3168 IPR005119 LysR, substrate-binding YPTS_3168 IPR000847 Transcription regulator HTH, LysR YPTS_3169 IPR011701 Major facilitator superfamily YPTS_3169 IPR036259 MFS transporter superfamily YPTS_3169 IPR020846 Major facilitator superfamily domain YPTS_3170 IPR000847 Transcription regulator HTH, LysR YPTS_3170 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3170 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3170 IPR005119 LysR, substrate-binding YPTS_3173 IPR004090 Chemotaxis methyl-accepting receptor YPTS_3173 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_3173 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTS_3173 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTS_3173 IPR003660 HAMP domain YPTS_3173 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTS_3177 IPR010627 Peptidase A24A, N-terminal YPTS_3177 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPTS_3177 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPTS_3184 IPR010054 General secretion pathway protein G YPTS_3184 IPR013545 Type II secretion system protein G YPTS_3184 IPR000983 Bacterial general secretion pathway protein G-type pilin YPTS_3184 IPR012902 Prokaryotic N-terminal methylation site YPTS_3185 IPR018076 Type II secretion system F domain YPTS_3185 IPR011850 General secretion pathway protein F YPTS_3185 IPR042094 Type II secretion system F domain superfamily YPTS_3185 IPR003004 GspF/PilC family YPTS_3185 IPR001992 Type II secretion system conserved site YPTS_3187 IPR004845 Type II secretion system GspD, conserved site YPTS_3187 IPR038591 NolW-like superfamily YPTS_3187 IPR004846 Type II/III secretion system YPTS_3187 IPR013356 Type II secretion system GspD YPTS_3187 IPR005644 NolW-like YPTS_3187 IPR001775 GspD/PilQ family YPTS_3190 IPR036874 Carbonic anhydrase superfamily YPTS_3190 IPR001765 Carbonic anhydrase YPTS_3190 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPTS_3194 IPR039174 Chondroitin sulfate ABC lyase YPTS_3194 IPR015177 Lyase, catalytic YPTS_3194 IPR008929 Chondroitin AC/alginate lyase YPTS_3194 IPR015176 Lyase, N-terminal YPTS_3194 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPTS_3194 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPTS_3194 IPR008979 Galactose-binding-like domain superfamily YPTS_3194 IPR011013 Galactose mutarotase-like domain superfamily YPTS_3194 IPR003159 Polysaccharide lyase family 8, central domain YPTS_3194 IPR004103 Polysaccharide lyase family 8, C-terminal YPTS_3194 IPR024200 Chondroitin sulfate ABC endolyase YPTS_3195 IPR000917 Sulfatase, N-terminal YPTS_3195 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_3196 IPR001034 DeoR-type HTH domain YPTS_3196 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3196 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3196 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_3196 IPR037171 NagB/RpiA transferase-like YPTS_3196 IPR014036 DeoR C-terminal sensor domain YPTS_3197 IPR013785 Aldolase-type TIM barrel YPTS_3197 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ YPTS_3197 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like YPTS_3198 IPR035464 AgaS, SIS domain YPTS_3198 IPR014180 Sugar isomerase, AgaS YPTS_3198 IPR001347 Sugar isomerase (SIS) YPTS_3198 IPR035466 GlmS/AgaS, SIS domain 1 YPTS_3199 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPTS_3199 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPTS_3199 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPTS_3200 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPTS_3201 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPTS_3202 IPR004701 Phosphotransferase system, mannose-type IIA component YPTS_3202 IPR033887 PTS system mannose/sorbose specific IIA subunit YPTS_3202 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPTS_3203 IPR006680 Amidohydrolase-related YPTS_3203 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPTS_3203 IPR032466 Metal-dependent hydrolase YPTS_3203 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_3204 IPR002347 Short-chain dehydrogenase/reductase SDR YPTS_3204 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPTS_3204 IPR036291 NAD(P)-binding domain superfamily YPTS_3204 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPTS_3206 IPR007197 Radical SAM YPTS_3206 IPR013785 Aldolase-type TIM barrel YPTS_3206 IPR023885 4Fe4S-binding SPASM domain YPTS_3206 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPTS_3207 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_3207 IPR024607 Sulfatase, conserved site YPTS_3207 IPR000917 Sulfatase, N-terminal YPTS_3210 IPR000771 Fructose-bisphosphate aldolase, class-II YPTS_3210 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPTS_3210 IPR013785 Aldolase-type TIM barrel YPTS_3210 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY YPTS_3213 IPR028082 Periplasmic binding protein-like I YPTS_3213 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3213 IPR000843 LacI-type HTH domain YPTS_3213 IPR023588 Transcription regulator HTH, PurR YPTS_3214 IPR020846 Major facilitator superfamily domain YPTS_3214 IPR036259 MFS transporter superfamily YPTS_3214 IPR011701 Major facilitator superfamily YPTS_3215 IPR030458 Glycosyl hydrolases family 31, active site YPTS_3215 IPR033403 Domain of unknown function DUF5110 YPTS_3215 IPR000322 Glycoside hydrolase family 31 YPTS_3215 IPR030459 Glycosyl hydrolases family 31, conserved site YPTS_3215 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPTS_3215 IPR011013 Galactose mutarotase-like domain superfamily YPTS_3215 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 YPTS_3215 IPR013780 Glycosyl hydrolase, all-beta YPTS_3215 IPR017853 Glycoside hydrolase superfamily YPTS_3216 IPR028082 Periplasmic binding protein-like I YPTS_3216 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3216 IPR000843 LacI-type HTH domain YPTS_3217 IPR023738 Maltoporin YPTS_3217 IPR036998 Porin, LamB-type superfamily YPTS_3217 IPR003192 Porin, LamB-type YPTS_3218 IPR036878 Glucose permease domain IIB YPTS_3218 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTS_3218 IPR011299 PTS system glucose-specific IIBC component YPTS_3218 IPR001996 Phosphotransferase system, IIB component, type 1 YPTS_3218 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTS_3218 IPR003352 Phosphotransferase system, EIIC YPTS_3219 IPR017853 Glycoside hydrolase superfamily YPTS_3219 IPR029062 Class I glutamine amidotransferase-like YPTS_3219 IPR013780 Glycosyl hydrolase, all-beta YPTS_3219 IPR013529 Glycoside hydrolase, family 42, N-terminal YPTS_3219 IPR003476 Glycoside hydrolase, family 42 YPTS_3219 IPR013739 Beta-galactosidase C-terminal YPTS_3219 IPR013738 Beta-galactosidase trimerisation YPTS_3220 IPR011683 Glycosyl hydrolase family 53 YPTS_3220 IPR017853 Glycoside hydrolase superfamily YPTS_3221 IPR035906 MetI-like superfamily YPTS_3221 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3222 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3222 IPR035906 MetI-like superfamily YPTS_3223 IPR006059 Bacterial extracellular solute-binding protein YPTS_3223 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPTS_3224 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_3224 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3224 IPR040582 MalK, OB fold domain YPTS_3224 IPR003439 ABC transporter-like YPTS_3224 IPR003593 AAA+ ATPase domain YPTS_3224 IPR017871 ABC transporter, conserved site YPTS_3225 IPR003593 AAA+ ATPase domain YPTS_3225 IPR017871 ABC transporter, conserved site YPTS_3225 IPR015861 ABC transporter, ribose import, RbsA YPTS_3225 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3225 IPR003439 ABC transporter-like YPTS_3226 IPR001851 ABC transporter, permease YPTS_3227 IPR028082 Periplasmic binding protein-like I YPTS_3227 IPR025997 Periplasmic binding protein YPTS_3229 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPTS_3229 IPR038765 Papain-like cysteine peptidase superfamily YPTS_3230 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3230 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3230 IPR005149 Transcription regulator PadR, N-terminal YPTS_3247 IPR001387 Cro/C1-type helix-turn-helix domain YPTS_3247 IPR022453 Zinc finger, MqsA-type YPTS_3247 IPR022452 Antitoxin MqsA YPTS_3247 IPR032758 Antitoxin MqsA/HigA-2 YPTS_3247 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3248 IPR031451 mRNA interferase toxin MqsR YPTS_3248 IPR038493 Toxin MqsR superfamily YPTS_3253 IPR004107 Integrase, SAM-like, N-terminal YPTS_3253 IPR010998 Integrase/recombinase, N-terminal YPTS_3253 IPR013762 Integrase-like, catalytic domain superfamily YPTS_3253 IPR002104 Integrase, catalytic domain YPTS_3253 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_3253 IPR023009 Tyrosine recombinase XerC/XerD YPTS_3266 IPR008766 Replication gene A protein YPTS_3268 IPR006430 Phage portal protein PBSX family YPTS_3268 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTS_3293 IPR025166 Integrase, DNA-binding domain YPTS_3293 IPR002104 Integrase, catalytic domain YPTS_3293 IPR038488 Integrase, DNA-binding domain superfamily YPTS_3293 IPR013762 Integrase-like, catalytic domain superfamily YPTS_3293 IPR004107 Integrase, SAM-like, N-terminal YPTS_3293 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_3293 IPR010998 Integrase/recombinase, N-terminal YPTS_3294 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPTS_3294 IPR012340 Nucleic acid-binding, OB-fold YPTS_3294 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II YPTS_3294 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPTS_3294 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPTS_3294 IPR002313 Lysine-tRNA ligase, class II YPTS_3294 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_3295 IPR004374 Peptide chain release factor 2 YPTS_3295 IPR000352 Peptide chain release factor class I YPTS_3295 IPR005139 Peptide chain release factor YPTS_3296 IPR041122 RecJ, OB domain YPTS_3296 IPR038763 DHH phosphoesterase superfamily YPTS_3296 IPR003156 DHHA1 domain YPTS_3296 IPR001667 DDH domain YPTS_3296 IPR004610 Bacterial RecJ exonuclease YPTS_3297 IPR013766 Thioredoxin domain YPTS_3297 IPR017937 Thioredoxin, conserved site YPTS_3297 IPR033954 Disulphide bond isomerase, DsbC/G YPTS_3297 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily YPTS_3297 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPTS_3297 IPR036249 Thioredoxin-like superfamily YPTS_3297 IPR012336 Thioredoxin-like fold YPTS_3298 IPR002104 Integrase, catalytic domain YPTS_3298 IPR011932 Tyrosine recombinase XerD YPTS_3298 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_3298 IPR013762 Integrase-like, catalytic domain superfamily YPTS_3298 IPR004107 Integrase, SAM-like, N-terminal YPTS_3298 IPR023009 Tyrosine recombinase XerC/XerD YPTS_3298 IPR010998 Integrase/recombinase, N-terminal YPTS_3299 IPR001226 Flavodoxin, conserved site YPTS_3299 IPR010086 Flavodoxin, long chain YPTS_3299 IPR029039 Flavoprotein-like superfamily YPTS_3299 IPR008254 Flavodoxin/nitric oxide synthase YPTS_3300 IPR010364 Uncharacterised protein family, inner membrane CreD YPTS_3301 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_3301 IPR029151 Periplasmic sensor-like domain superfamily YPTS_3301 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_3301 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_3301 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3301 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_3301 IPR003660 HAMP domain YPTS_3301 IPR005467 Histidine kinase domain YPTS_3302 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_3302 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3302 IPR039420 Transcriptional regulatory protein WalR-like YPTS_3302 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_3302 IPR001789 Signal transduction response regulator, receiver domain YPTS_3302 IPR011006 CheY-like superfamily YPTS_3304 IPR005631 Flavinator of succinate dehydrogenase YPTS_3304 IPR036714 Flavinator of succinate dehydrogenase superfamily YPTS_3305 IPR023758 tRNA-modifying protein YgfZ YPTS_3305 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPTS_3305 IPR006222 Aminomethyltransferase, folate-binding domain YPTS_3305 IPR017703 YgfZ/GcvT conserved site YPTS_3307 IPR004254 AdipoR/Haemolysin-III-related YPTS_3307 IPR005744 Hly-III YPTS_3309 IPR008640 Head domain of trimeric autotransporter adhesin YPTS_3309 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_3309 IPR005594 YadA-like, C-terminal YPTS_3309 IPR024973 ESPR domain YPTS_3309 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTS_3311 IPR003437 Glycine dehydrogenase (decarboxylating) YPTS_3311 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_3311 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_3311 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_3311 IPR020581 Glycine cleavage system P protein YPTS_3312 IPR002930 Glycine cleavage system H-protein YPTS_3312 IPR017453 Glycine cleavage system H-protein, subgroup YPTS_3312 IPR011053 Single hybrid motif YPTS_3312 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPTS_3312 IPR033753 Glycine cleavage system H-protein/Simiate YPTS_3312 IPR000089 Biotin/lipoyl attachment YPTS_3313 IPR028896 Aminomethyltransferase-like YPTS_3313 IPR022903 Glycine cleavage system T protein, bacteria YPTS_3313 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPTS_3313 IPR006223 Glycine cleavage system T protein YPTS_3313 IPR006222 Aminomethyltransferase, folate-binding domain YPTS_3313 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPTS_3313 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPTS_3315 IPR002938 FAD-binding domain YPTS_3315 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3315 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTS_3315 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTS_3316 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPTS_3316 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPTS_3316 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPTS_3316 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3316 IPR002938 FAD-binding domain YPTS_3317 IPR001714 Peptidase M24, methionine aminopeptidase YPTS_3317 IPR007865 Aminopeptidase P, N-terminal YPTS_3317 IPR000994 Peptidase M24 YPTS_3317 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPTS_3317 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPTS_3317 IPR036005 Creatinase/aminopeptidase-like YPTS_3318 IPR011978 Uncharacterised protein family UPF0149 YPTS_3318 IPR036255 YgfB-like superfamily YPTS_3319 IPR023771 Cell division protein ZapA, eubacteria YPTS_3319 IPR007838 Cell division protein ZapA-like YPTS_3319 IPR036192 Cell division protein ZapA-like superfamily YPTS_3320 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPTS_3320 IPR037171 NagB/RpiA transferase-like YPTS_3320 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YPTS_3321 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTS_3321 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_3321 IPR002912 ACT domain YPTS_3321 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_3321 IPR036291 NAD(P)-binding domain superfamily YPTS_3321 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTS_3322 IPR037171 NagB/RpiA transferase-like YPTS_3322 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPTS_3322 IPR004788 Ribose 5-phosphate isomerase, type A YPTS_3323 IPR017685 HTH-type transcriptional regulator ArgP YPTS_3323 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPTS_3323 IPR005119 LysR, substrate-binding YPTS_3323 IPR000847 Transcription regulator HTH, LysR YPTS_3323 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3323 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3324 IPR007497 Protein of unknown function DUF541 YPTS_3325 IPR023445 Arginine exporter protein ArgO, enterobacteria YPTS_3325 IPR001123 Amino acid exporter protein, LeuE-type YPTS_3325 IPR004777 L-lysine exporter/arginine exporter YPTS_3326 IPR010920 LSM domain superfamily YPTS_3326 IPR006685 Mechanosensitive ion channel MscS YPTS_3326 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPTS_3326 IPR006686 Mechanosensitive ion channel MscS, conserved site YPTS_3326 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPTS_3326 IPR008910 Conserved TM helix YPTS_3326 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPTS_3327 IPR013785 Aldolase-type TIM barrel YPTS_3327 IPR000771 Fructose-bisphosphate aldolase, class-II YPTS_3327 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPTS_3328 IPR036043 Phosphoglycerate kinase superfamily YPTS_3328 IPR015824 Phosphoglycerate kinase, N-terminal YPTS_3328 IPR015911 Phosphoglycerate kinase, conserved site YPTS_3328 IPR001576 Phosphoglycerate kinase YPTS_3329 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPTS_3329 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPTS_3329 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPTS_3329 IPR006422 D-erythrose-4-phosphate dehydrogenase YPTS_3329 IPR036291 NAD(P)-binding domain superfamily YPTS_3329 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPTS_3330 IPR005474 Transketolase, N-terminal YPTS_3330 IPR033247 Transketolase family YPTS_3330 IPR033248 Transketolase, C-terminal domain YPTS_3330 IPR005475 Transketolase-like, pyrimidine-binding domain YPTS_3330 IPR005478 Transketolase, bacterial-like YPTS_3330 IPR029061 Thiamin diphosphate-binding fold YPTS_3330 IPR020826 Transketolase binding site YPTS_3330 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPTS_3331 IPR001915 Peptidase M48 YPTS_3332 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPTS_3332 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPTS_3333 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPTS_3333 IPR000183 Ornithine/DAP/Arg decarboxylase YPTS_3333 IPR029066 PLP-binding barrel YPTS_3333 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPTS_3333 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPTS_3333 IPR041128 Arginine decarboxylase, C-terminal helical YPTS_3333 IPR002985 Arginine decarboxylase YPTS_3333 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPTS_3333 IPR040634 Arginine decarboxylase, helical bundle domain YPTS_3335 IPR022628 S-adenosylmethionine synthetase, N-terminal YPTS_3335 IPR022629 S-adenosylmethionine synthetase, central domain YPTS_3335 IPR022630 S-adenosylmethionine synthetase, C-terminal YPTS_3335 IPR022631 S-adenosylmethionine synthetase, conserved site YPTS_3335 IPR002133 S-adenosylmethionine synthetase YPTS_3335 IPR022636 S-adenosylmethionine synthetase superfamily YPTS_3336 IPR006640 SprT-like YPTS_3336 IPR023483 Uncharacterised protein family SprT YPTS_3336 IPR035240 SprT-like, zinc ribbon domain YPTS_3337 IPR007346 Endonuclease I YPTS_3339 IPR029028 Alpha/beta knot methyltransferases YPTS_3339 IPR015947 PUA-like superfamily YPTS_3339 IPR006700 Ribosomal RNA small subunit methyltransferase E YPTS_3339 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPTS_3340 IPR016185 Pre-ATP-grasp domain superfamily YPTS_3340 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPTS_3340 IPR006284 Glutathione synthetase, prokaryotic YPTS_3340 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPTS_3340 IPR013815 ATP-grasp fold, subdomain 1 YPTS_3340 IPR011761 ATP-grasp fold YPTS_3341 IPR003774 Protein of unknown function UPF0301 YPTS_3342 IPR012337 Ribonuclease H-like superfamily YPTS_3342 IPR037027 YqgF/RNase H-like domain superfamily YPTS_3342 IPR006641 YqgF/RNase H-like domain YPTS_3342 IPR005227 Putative pre-16S rRNA nuclease YPTS_3343 IPR036526 Carbon-nitrogen hydrolase superfamily YPTS_3343 IPR003010 Carbon-nitrogen hydrolase YPTS_3343 IPR023719 Aliphatic amidase YPTS_3344 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPTS_3344 IPR017754 Agmatine deiminase YPTS_3345 IPR003593 AAA+ ATPase domain YPTS_3345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3345 IPR006321 Pilus retraction protein PilT YPTS_3345 IPR001482 Type II/IV secretion system protein YPTS_3346 IPR001608 Alanine racemase, N-terminal YPTS_3346 IPR011078 Pyridoxal phosphate homeostasis protein YPTS_3346 IPR029066 PLP-binding barrel YPTS_3347 IPR036291 NAD(P)-binding domain superfamily YPTS_3347 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_3347 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPTS_3347 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPTS_3347 IPR000304 Pyrroline-5-carboxylate reductase YPTS_3349 IPR003425 CCB3/YggT YPTS_3350 IPR003746 Protein of unknown function DUF167 YPTS_3350 IPR005228 Conserved hypothetical protein CHP00251 YPTS_3350 IPR036591 YggU-like superfamily YPTS_3351 IPR020922 dITP/XTP pyrophosphatase YPTS_3351 IPR002637 Ham1-like protein YPTS_3351 IPR029001 Inosine triphosphate pyrophosphatase-like YPTS_3352 IPR007197 Radical SAM YPTS_3352 IPR006638 Elp3/MiaB/NifB YPTS_3352 IPR010723 HemN, C-terminal YPTS_3352 IPR004559 Heme chaperone HemW-like YPTS_3352 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_3352 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPTS_3353 IPR029058 Alpha/Beta hydrolase fold YPTS_3353 IPR032074 Actin cross-linking domain YPTS_3353 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YPTS_3353 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPTS_3353 IPR022742 Serine aminopeptidase, S33 YPTS_3353 IPR011509 RtxA toxin YPTS_3353 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_3353 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain YPTS_3354 IPR021307 Protein of unknown function DUF2884 YPTS_3355 IPR015868 Glutaminase YPTS_3355 IPR012338 Beta-lactamase/transpeptidase-like YPTS_3356 IPR007416 Protein of unknown function DUF469 YPTS_3357 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3357 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type YPTS_3358 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_3358 IPR029119 MutY, C-terminal YPTS_3358 IPR005760 A/G-specific adenine glycosylase MutY YPTS_3358 IPR011257 DNA glycosylase YPTS_3358 IPR004036 Endonuclease III-like, conserved site-2 YPTS_3358 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPTS_3358 IPR003265 HhH-GPD domain YPTS_3358 IPR004035 Endonuclease III, iron-sulphur binding site YPTS_3358 IPR000445 Helix-hairpin-helix motif YPTS_3358 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPTS_3359 IPR036766 Fe(II) trafficking protein YggX superfamily YPTS_3359 IPR007457 Fe(II) trafficking protein YggX YPTS_3360 IPR008258 Transglycosylase SLT domain 1 YPTS_3360 IPR024570 Murein transglycosylase-C, N-terminal YPTS_3360 IPR023664 Murein transglycosylase-C YPTS_3360 IPR023346 Lysozyme-like domain superfamily YPTS_3360 IPR000189 Prokaryotic transglycosylase, active site YPTS_3363 IPR012910 TonB-dependent receptor, plug domain YPTS_3363 IPR039423 TonB-dependent receptor-like YPTS_3363 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_3364 IPR001851 ABC transporter, permease YPTS_3365 IPR003593 AAA+ ATPase domain YPTS_3365 IPR003439 ABC transporter-like YPTS_3365 IPR015861 ABC transporter, ribose import, RbsA YPTS_3365 IPR017871 ABC transporter, conserved site YPTS_3365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3366 IPR028082 Periplasmic binding protein-like I YPTS_3366 IPR025997 Periplasmic binding protein YPTS_3367 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPTS_3367 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_3367 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_3367 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPTS_3367 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_3367 IPR027464 Ornithine decarboxylase, N-terminal YPTS_3367 IPR011006 CheY-like superfamily YPTS_3367 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPTS_3367 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPTS_3367 IPR011193 Ornithine/lysine/arginine decarboxylase YPTS_3370 IPR005063 Transposase, IS1 YPTS_3371 IPR009057 Homeobox-like domain superfamily YPTS_3371 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTS_3371 IPR003220 InsA N-terminal domain YPTS_3376 IPR009057 Homeobox-like domain superfamily YPTS_3376 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTS_3376 IPR003220 InsA N-terminal domain YPTS_3380 IPR018368 ClpA/B, conserved site 1 YPTS_3380 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3380 IPR001270 ClpA/B family YPTS_3380 IPR004176 Clp, N-terminal YPTS_3380 IPR036628 Clp, N-terminal domain superfamily YPTS_3380 IPR019489 Clp ATPase, C-terminal YPTS_3380 IPR017729 Type VI secretion system, ATPase ClpV1 YPTS_3380 IPR003959 ATPase, AAA-type, core YPTS_3380 IPR041546 ClpA/ClpB, AAA lid domain YPTS_3380 IPR003593 AAA+ ATPase domain YPTS_3382 IPR028974 TSP type-3 repeat YPTS_3382 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPTS_3382 IPR006664 Outer membrane protein, bacterial YPTS_3382 IPR006665 OmpA-like domain YPTS_3382 IPR036737 OmpA-like domain superfamily YPTS_3382 IPR008722 Outer membrane porin F, N-terminal YPTS_3382 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_3389 IPR003220 InsA N-terminal domain YPTS_3389 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPTS_3391 IPR003675 CAAX prenyl protease 2 YPTS_3394 IPR001690 Autoinducer synthase YPTS_3394 IPR018311 Autoinducer synthesis, conserved site YPTS_3394 IPR016181 Acyl-CoA N-acyltransferase YPTS_3395 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPTS_3395 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_3395 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPTS_3395 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3395 IPR000792 Transcription regulator LuxR, C-terminal YPTS_3399 IPR022770 Ferric iron reductase FhuF domain YPTS_3399 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTS_3399 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTS_3400 IPR019432 Siderophore biosynthesis protein, conserved domain YPTS_3400 IPR016181 Acyl-CoA N-acyltransferase YPTS_3401 IPR022770 Ferric iron reductase FhuF domain YPTS_3401 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPTS_3401 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPTS_3402 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3402 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPTS_3403 IPR010917 TonB-dependent receptor, conserved site YPTS_3403 IPR010105 TonB-dependent siderophore receptor YPTS_3403 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_3403 IPR039426 Vitamin B12 transporter BtuB-like YPTS_3403 IPR037066 TonB-dependent receptor, plug domain superfamily YPTS_3403 IPR010916 TonB box, conserved site YPTS_3403 IPR012910 TonB-dependent receptor, plug domain YPTS_3403 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_3404 IPR001927 Sodium:galactoside symporter YPTS_3404 IPR018043 Sodium:galactoside symporter, conserved site YPTS_3404 IPR036259 MFS transporter superfamily YPTS_3404 IPR020846 Major facilitator superfamily domain YPTS_3404 IPR039672 Lactose permease-like YPTS_3406 IPR000843 LacI-type HTH domain YPTS_3406 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3406 IPR028082 Periplasmic binding protein-like I YPTS_3407 IPR001898 Solute carrier family 13 YPTS_3407 IPR031312 Sodium/sulphate symporter, conserved site YPTS_3419 IPR001826 RHS protein YPTS_3419 IPR006530 YD repeat YPTS_3419 IPR031325 RHS repeat YPTS_3419 IPR022385 Rhs repeat-associated core YPTS_3421 IPR006531 Gp5 N-terminal YPTS_3421 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTS_3421 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTS_3421 IPR037026 Vgr protein, OB-fold domain superfamily YPTS_3422 IPR005546 Autotransporter beta-domain YPTS_3422 IPR036709 Autotransporter beta-domain superfamily YPTS_3422 IPR013425 Autotransporter-associated beta strand repeat YPTS_3422 IPR011050 Pectin lyase fold/virulence factor YPTS_3422 IPR006315 Outer membrane autotransporter barrel YPTS_3422 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_3423 IPR011050 Pectin lyase fold/virulence factor YPTS_3423 IPR005546 Autotransporter beta-domain YPTS_3423 IPR006315 Outer membrane autotransporter barrel YPTS_3423 IPR036709 Autotransporter beta-domain superfamily YPTS_3423 IPR013425 Autotransporter-associated beta strand repeat YPTS_3423 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPTS_3424 IPR003474 Gluconate transporter YPTS_3428 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3428 IPR039421 Type I protein exporter YPTS_3428 IPR017871 ABC transporter, conserved site YPTS_3428 IPR003593 AAA+ ATPase domain YPTS_3428 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_3428 IPR011917 ABC transporter, lipid A export, MsbA YPTS_3428 IPR011527 ABC transporter type 1, transmembrane domain YPTS_3428 IPR003439 ABC transporter-like YPTS_3429 IPR017938 Riboflavin synthase-like beta-barrel YPTS_3429 IPR017871 ABC transporter, conserved site YPTS_3429 IPR007037 Siderophore-interacting protein, C-terminal domain YPTS_3429 IPR013113 FAD-binding 9, siderophore-interacting YPTS_3429 IPR017927 FAD-binding domain, ferredoxin reductase-type YPTS_3429 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPTS_3429 IPR003439 ABC transporter-like YPTS_3429 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3429 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPTS_3429 IPR011527 ABC transporter type 1, transmembrane domain YPTS_3429 IPR003593 AAA+ ATPase domain YPTS_3431 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPTS_3431 IPR029058 Alpha/Beta hydrolase fold YPTS_3431 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_3431 IPR001031 Thioesterase YPTS_3431 IPR020802 Polyketide synthase, thioesterase domain YPTS_3434 IPR042099 AMP-dependent synthetase-like superfamily YPTS_3434 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3434 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTS_3434 IPR006162 Phosphopantetheine attachment site YPTS_3434 IPR009081 Phosphopantetheine binding ACP domain YPTS_3434 IPR020845 AMP-binding, conserved site YPTS_3434 IPR001242 Condensation domain YPTS_3434 IPR000873 AMP-dependent synthetase/ligase YPTS_3434 IPR010071 Amino acid adenylation domain YPTS_3434 IPR013217 Methyltransferase type 12 YPTS_3434 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_3434 IPR036736 ACP-like superfamily YPTS_3435 IPR006162 Phosphopantetheine attachment site YPTS_3435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3435 IPR009081 Phosphopantetheine binding ACP domain YPTS_3435 IPR001242 Condensation domain YPTS_3435 IPR013217 Methyltransferase type 12 YPTS_3435 IPR010071 Amino acid adenylation domain YPTS_3435 IPR036736 ACP-like superfamily YPTS_3435 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPTS_3435 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPTS_3435 IPR042099 AMP-dependent synthetase-like superfamily YPTS_3435 IPR000873 AMP-dependent synthetase/ligase YPTS_3435 IPR020845 AMP-binding, conserved site YPTS_3436 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPTS_3436 IPR039426 Vitamin B12 transporter BtuB-like YPTS_3436 IPR000531 TonB-dependent receptor-like, beta-barrel YPTS_3436 IPR010105 TonB-dependent siderophore receptor YPTS_3436 IPR012910 TonB-dependent receptor, plug domain YPTS_3437 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPTS_3437 IPR036264 Bacterial exopeptidase dimerisation domain YPTS_3437 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPTS_3437 IPR011650 Peptidase M20, dimerisation domain YPTS_3437 IPR002933 Peptidase M20 YPTS_3438 IPR011540 AbgT, Proteobacteria YPTS_3438 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT YPTS_3440 IPR032675 Leucine-rich repeat domain superfamily YPTS_3440 IPR029487 Novel E3 ligase domain YPTS_3440 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTS_3441 IPR036709 Autotransporter beta-domain superfamily YPTS_3441 IPR006315 Outer membrane autotransporter barrel YPTS_3441 IPR011050 Pectin lyase fold/virulence factor YPTS_3441 IPR005546 Autotransporter beta-domain YPTS_3443 IPR036770 Ankyrin repeat-containing domain superfamily YPTS_3443 IPR012927 ShET2 enterotoxin, N-terminal YPTS_3443 IPR002110 Ankyrin repeat YPTS_3444 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPTS_3444 IPR001036 Acriflavin resistance protein YPTS_3444 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPTS_3445 IPR006143 RND efflux pump, membrane fusion protein YPTS_3445 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_3446 IPR035965 PAS domain superfamily YPTS_3446 IPR005330 MHYT domain YPTS_3446 IPR029787 Nucleotide cyclase YPTS_3446 IPR035919 EAL domain superfamily YPTS_3446 IPR000160 GGDEF domain YPTS_3446 IPR000014 PAS domain YPTS_3446 IPR001633 EAL domain YPTS_3448 IPR038965 Transposase InsF-like YPTS_3448 IPR001584 Integrase, catalytic core YPTS_3448 IPR025948 HTH-like domain YPTS_3448 IPR012337 Ribonuclease H-like superfamily YPTS_3448 IPR036397 Ribonuclease H superfamily YPTS_3449 IPR008816 Glycine zipper 2TM domain YPTS_3453 IPR025713 Motility protein B, N-terminal domain YPTS_3453 IPR006665 OmpA-like domain YPTS_3453 IPR036737 OmpA-like domain superfamily YPTS_3454 IPR000540 Flagellar motor protein MotA, conserved site YPTS_3454 IPR022522 Flagellar motor stator, MotA YPTS_3454 IPR002898 MotA/TolQ/ExbB proton channel YPTS_3455 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPTS_3455 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_3455 IPR014284 RNA polymerase sigma-70 like domain YPTS_3455 IPR000943 RNA polymerase sigma-70 YPTS_3455 IPR007627 RNA polymerase sigma-70 region 2 YPTS_3455 IPR013325 RNA polymerase sigma factor, region 2 YPTS_3455 IPR007630 RNA polymerase sigma-70 region 4 YPTS_3460 IPR003481 Flagellar hook-associated protein 2, N-terminal YPTS_3460 IPR010809 Flagellar hook-associated protein 2, C-terminal YPTS_3460 IPR040026 Flagellar hook-associated protein 2 YPTS_3460 IPR010810 Flagellin hook, IN motif YPTS_3461 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPTS_3461 IPR001029 Flagellin, D0/D1 domain YPTS_3461 IPR010810 Flagellin hook, IN motif YPTS_3461 IPR001492 Flagellin YPTS_3462 IPR001492 Flagellin YPTS_3462 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPTS_3462 IPR001029 Flagellin, D0/D1 domain YPTS_3462 IPR010810 Flagellin hook, IN motif YPTS_3463 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_3463 IPR040970 CadC C-terminal domain 1 YPTS_3463 IPR039420 Transcriptional regulatory protein WalR-like YPTS_3463 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_3463 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3463 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_3467 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3467 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_3467 IPR002371 Flagellar hook-associated protein 1 YPTS_3469 IPR001782 Flagellar P-ring protein YPTS_3470 IPR000527 Flagellar L-ring protein YPTS_3471 IPR019776 Flagellar basal body rod protein, conserved site YPTS_3471 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_3471 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_3471 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_3471 IPR012834 Flagellar basal-body rod FlgG YPTS_3471 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3472 IPR019776 Flagellar basal body rod protein, conserved site YPTS_3472 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3472 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_3472 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_3472 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_3473 IPR011491 Flagellar hook protein FlgE YPTS_3473 IPR037058 Flagellar hook protein FlgE superfamily YPTS_3473 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3473 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPTS_3473 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPTS_3473 IPR019776 Flagellar basal body rod protein, conserved site YPTS_3473 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_3474 IPR005648 Flagellar hook capping protein YPTS_3474 IPR025965 FlgD Ig-like domain YPTS_3474 IPR025963 FlgD Tudor-like domain YPTS_3475 IPR019776 Flagellar basal body rod protein, conserved site YPTS_3475 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3475 IPR006299 Flagellar basal-body rod protein FlgC YPTS_3475 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPTS_3476 IPR006300 Flagellar basal-body rod protein FlgB YPTS_3476 IPR019776 Flagellar basal body rod protein, conserved site YPTS_3476 IPR001444 Flagellar basal body rod protein, N-terminal YPTS_3477 IPR013974 SAF domain YPTS_3477 IPR039246 Flagellar protein FlgA YPTS_3477 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPTS_3481 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTS_3481 IPR040627 T3SS EscN ATPase, C-terminal YPTS_3481 IPR020005 Flagellar export ATPase FliI, clade 1 YPTS_3481 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3481 IPR032463 ATPase, type III secretion system, FliI YPTS_3481 IPR005714 ATPase, type III secretion system, FliI/YscN YPTS_3481 IPR003593 AAA+ ATPase domain YPTS_3481 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_3484 IPR006182 Secretory protein YscJ/FliF YPTS_3484 IPR013556 Flagellar M-ring C-terminal YPTS_3484 IPR000067 Flagellar M-ring protein FliF YPTS_3485 IPR001624 Flagellar hook-basal body complex protein FliE YPTS_3486 IPR001789 Signal transduction response regulator, receiver domain YPTS_3486 IPR009057 Homeobox-like domain superfamily YPTS_3486 IPR025944 Sigma-54 interaction domain, conserved site YPTS_3486 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3486 IPR002078 RNA polymerase sigma factor 54 interaction domain YPTS_3486 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPTS_3486 IPR002197 DNA binding HTH domain, Fis-type YPTS_3486 IPR011006 CheY-like superfamily YPTS_3486 IPR003593 AAA+ ATPase domain YPTS_3486 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPTS_3488 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPTS_3488 IPR012826 Flagellar motor switch FliN YPTS_3488 IPR036429 SpoA-like superfamily YPTS_3488 IPR001543 Surface presentation of antigen (SpoA) YPTS_3489 IPR005838 Type III secretion system inner membrane P protein YPTS_3489 IPR005837 Flagellar transport protein FliP YPTS_3490 IPR002191 Bacterial export protein family 3 YPTS_3490 IPR006305 Flagellar biosynthesis protein FliQ YPTS_3491 IPR006303 Flagellar biosynthesis protein FliR YPTS_3491 IPR002010 Type III secretion system inner membrane R protein YPTS_3492 IPR006135 Type III secretion system substrate exporter YPTS_3492 IPR029025 Type III secretion system substrate exporter, C-terminal YPTS_3492 IPR006136 Flagellar biosynthetic protein FlhB YPTS_3493 IPR042194 FHIPEP, domain 1 YPTS_3493 IPR006301 Flagellar biosynthesis protein FlhA YPTS_3493 IPR025505 FHIPEP conserved site YPTS_3493 IPR042196 FHIPEP, domain 4 YPTS_3493 IPR042193 FHIPEP, domain 3 YPTS_3493 IPR001712 Type III secretion system FHIPEP YPTS_3497 IPR002491 ABC transporter periplasmic binding domain YPTS_3498 IPR000259 Fimbrial-type adhesion domain YPTS_3498 IPR015303 Fimbrial adhesin F17-AG, lectin domain YPTS_3498 IPR008966 Adhesion domain superfamily YPTS_3498 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_3499 IPR008962 PapD-like superfamily YPTS_3499 IPR013783 Immunoglobulin-like fold YPTS_3499 IPR016148 Pili assembly chaperone, C-terminal YPTS_3499 IPR016147 Pili assembly chaperone, N-terminal YPTS_3499 IPR018046 Pili assembly chaperone, conserved site YPTS_3499 IPR001829 Pili assembly chaperone, bacterial YPTS_3499 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_3500 IPR000015 Outer membrane usher protein YPTS_3500 IPR018030 Fimbrial membrane usher, conserved site YPTS_3500 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_3500 IPR025885 PapC, N-terminal domain YPTS_3500 IPR025949 PapC-like, C-terminal domain YPTS_3500 IPR037224 PapC, N-terminal domain superfamily YPTS_3501 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_3501 IPR000259 Fimbrial-type adhesion domain YPTS_3501 IPR008966 Adhesion domain superfamily YPTS_3503 IPR011583 Chitinase II YPTS_3503 IPR001223 Glycoside hydrolase family 18, catalytic domain YPTS_3503 IPR001579 Glycoside hydrolase, chitinase active site YPTS_3503 IPR017853 Glycoside hydrolase superfamily YPTS_3504 IPR014756 Immunoglobulin E-set YPTS_3504 IPR041029 N-acetylglucosamine binding protein A domain 2 YPTS_3504 IPR020879 N-acetylglucosamine-binding protein A YPTS_3504 IPR004302 Cellulose/chitin-binding protein, N-terminal YPTS_3510 IPR007055 BON domain YPTS_3510 IPR004846 Type II/III secretion system YPTS_3510 IPR032789 Pilus formation protein, N-terminal YPTS_3510 IPR014004 Transport-associated and nodulation domain, bacteria YPTS_3510 IPR001775 GspD/PilQ family YPTS_3513 IPR022399 Helicase/secretion neighbourhood ATPase YPTS_3513 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3513 IPR001482 Type II/IV secretion system protein YPTS_3522 IPR003400 Biopolymer transport protein ExbD/TolR YPTS_3522 IPR014170 TonB system transport protein ExbD type-1 YPTS_3523 IPR014164 TonB-system energizer ExbB type-1 YPTS_3523 IPR002898 MotA/TolQ/ExbB proton channel YPTS_3524 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPTS_3524 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_3524 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_3524 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_3524 IPR006233 Cystathionine beta-lyase, bacterial YPTS_3525 IPR032818 DedA family YPTS_3525 IPR032816 SNARE associated Golgi protein YPTS_3526 IPR009594 Transcription regulator HTH, AraC, N-terminal YPTS_3526 IPR018060 DNA binding HTH domain, AraC-type YPTS_3526 IPR009057 Homeobox-like domain superfamily YPTS_3527 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPTS_3527 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPTS_3528 IPR018170 Aldo/keto reductase, conserved site YPTS_3528 IPR020471 Aldo/keto reductase YPTS_3528 IPR023210 NADP-dependent oxidoreductase domain YPTS_3528 IPR036812 NADP-dependent oxidoreductase domain superfamily YPTS_3529 IPR006638 Elp3/MiaB/NifB YPTS_3529 IPR020612 Methylthiotransferase, conserved site YPTS_3529 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPTS_3529 IPR022946 Uncharacterised protein family UPF0313 YPTS_3529 IPR007197 Radical SAM YPTS_3529 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_3529 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPTS_3530 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_3530 IPR011706 Multicopper oxidase, type 2 YPTS_3530 IPR026589 Cell division protein FtsP YPTS_3530 IPR011707 Multicopper oxidase, type 3 YPTS_3530 IPR008972 Cupredoxin YPTS_3532 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPTS_3532 IPR002123 Phospholipid/glycerol acyltransferase YPTS_3533 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPTS_3533 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPTS_3533 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTS_3533 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPTS_3533 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPTS_3533 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPTS_3533 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPTS_3534 IPR003680 Flavodoxin-like fold YPTS_3534 IPR029039 Flavoprotein-like superfamily YPTS_3535 IPR000847 Transcription regulator HTH, LysR YPTS_3535 IPR005119 LysR, substrate-binding YPTS_3535 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3535 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3536 IPR002288 DNA gyrase B subunit, C-terminal YPTS_3536 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_3536 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPTS_3536 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_3536 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3536 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPTS_3536 IPR018522 DNA topoisomerase, type IIA, conserved site YPTS_3536 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPTS_3536 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPTS_3536 IPR006171 TOPRIM domain YPTS_3536 IPR001241 DNA topoisomerase, type IIA YPTS_3536 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_3537 IPR029058 Alpha/Beta hydrolase fold YPTS_3537 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPTS_3538 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPTS_3538 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPTS_3538 IPR029052 Metallo-dependent phosphatase-like YPTS_3539 IPR009659 Protein of unknown function DUF1249 YPTS_3540 IPR004385 Nucleoside diphosphate pyrophosphatase YPTS_3540 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_3540 IPR020084 NUDIX hydrolase, conserved site YPTS_3540 IPR000086 NUDIX hydrolase domain YPTS_3541 IPR010130 Type I secretion outer membrane protein, TolC YPTS_3541 IPR003423 Outer membrane efflux protein YPTS_3543 IPR009576 Biofilm formation YgiB YPTS_3544 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPTS_3544 IPR016185 Pre-ATP-grasp domain superfamily YPTS_3545 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPTS_3545 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type YPTS_3546 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTS_3546 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPTS_3548 IPR007475 Ubiquinone biosynthesis accessory factor UbiK YPTS_3549 IPR002293 Amino acid/polyamine transporter I YPTS_3550 IPR011611 Carbohydrate kinase PfkB YPTS_3550 IPR004821 Cytidyltransferase-like domain YPTS_3550 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_3550 IPR023030 Bifunctional protein HldE YPTS_3550 IPR011913 RfaE bifunctional protein, domain I YPTS_3550 IPR011914 RfaE bifunctional protein, domain II YPTS_3550 IPR029056 Ribokinase-like YPTS_3550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_3551 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme YPTS_3551 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPTS_3551 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPTS_3552 IPR033469 CYTH-like domain superfamily YPTS_3552 IPR039013 Inorganic triphosphatase YgiF YPTS_3552 IPR007899 CHAD domain YPTS_3552 IPR023577 CYTH domain YPTS_3553 IPR016476 SH3 domain protein YPTS_3553 IPR003646 SH3-like domain, bacterial-type YPTS_3555 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPTS_3555 IPR003607 HD/PDEase domain YPTS_3555 IPR006674 HD domain YPTS_3555 IPR002646 Poly A polymerase, head domain YPTS_3555 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPTS_3556 IPR003824 Undecaprenyl-diphosphatase UppP YPTS_3557 IPR006157 Dihydroneopterin aldolase/epimerase domain YPTS_3557 IPR006156 Dihydroneopterin aldolase YPTS_3558 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPTS_3559 IPR017861 Kae1/TsaD family YPTS_3559 IPR017860 Peptidase M22, conserved site YPTS_3559 IPR000905 Gcp-like domain YPTS_3559 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPTS_3560 IPR001911 Ribosomal protein S21 YPTS_3560 IPR038380 Ribosomal protein S21 superfamily YPTS_3560 IPR018278 Ribosomal protein S21, conserved site YPTS_3561 IPR034151 Bacterial DnaG primase, TOPRIM domain YPTS_3561 IPR036977 DNA Primase, CHC2-type zinc finger YPTS_3561 IPR013264 DNA primase, catalytic core, N-terminal YPTS_3561 IPR030846 DNA primase DnaG, bacteria YPTS_3561 IPR006295 DNA primase, DnaG YPTS_3561 IPR013173 DNA primase DnaG, DnaB-binding domain YPTS_3561 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YPTS_3561 IPR019475 DNA primase, DnaB-helicase binding domain YPTS_3561 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPTS_3561 IPR006171 TOPRIM domain YPTS_3561 IPR002694 Zinc finger, CHC2-type YPTS_3562 IPR007624 RNA polymerase sigma-70 region 3 YPTS_3562 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3562 IPR014284 RNA polymerase sigma-70 like domain YPTS_3562 IPR000943 RNA polymerase sigma-70 YPTS_3562 IPR009042 RNA polymerase sigma-70 region 1.2 YPTS_3562 IPR007627 RNA polymerase sigma-70 region 2 YPTS_3562 IPR028630 RNA polymerase sigma factor RpoD YPTS_3562 IPR007630 RNA polymerase sigma-70 region 4 YPTS_3562 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPTS_3562 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPTS_3562 IPR013324 RNA polymerase sigma factor, region 3/4-like YPTS_3562 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPTS_3562 IPR042189 Sigma-70 factor, region 1.1 superfamily YPTS_3562 IPR013325 RNA polymerase sigma factor, region 2 YPTS_3569 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 YPTS_3569 IPR011083 Phage tail collar domain YPTS_3569 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal YPTS_3569 IPR008969 Carboxypeptidase-like, regulatory domain superfamily YPTS_3569 IPR037053 Phage tail collar domain superfamily YPTS_3587 IPR006430 Phage portal protein PBSX family YPTS_3587 IPR030935 Phage portal protein PBSX family, Proteobacteria YPTS_3589 IPR008766 Replication gene A protein YPTS_3594 IPR009679 Bacteriophage 186, CII YPTS_3596 IPR032499 Bacteriophage CI repressor, C-terminal YPTS_3596 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3596 IPR010744 Bacteriophage CI repressor YPTS_3598 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_3598 IPR011931 Tyrosine recombinase XerC YPTS_3598 IPR023009 Tyrosine recombinase XerC/XerD YPTS_3598 IPR004107 Integrase, SAM-like, N-terminal YPTS_3598 IPR010998 Integrase/recombinase, N-terminal YPTS_3598 IPR002104 Integrase, catalytic domain YPTS_3598 IPR013762 Integrase-like, catalytic domain superfamily YPTS_3607 IPR000847 Transcription regulator HTH, LysR YPTS_3607 IPR005119 LysR, substrate-binding YPTS_3607 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3607 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3611 IPR006056 RidA family YPTS_3611 IPR006175 YjgF/YER057c/UK114 family YPTS_3611 IPR035959 RutC-like superfamily YPTS_3611 IPR019897 RidA, conserved site YPTS_3618 IPR005694 Efflux pump membrane protein YPTS_3618 IPR030196 Multidrug resistance protein MdtN YPTS_3618 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPTS_3619 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPTS_3621 IPR026891 Fibronectin type III-like domain YPTS_3621 IPR017853 Glycoside hydrolase superfamily YPTS_3621 IPR013783 Immunoglobulin-like fold YPTS_3621 IPR019800 Glycoside hydrolase, family 3, active site YPTS_3621 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPTS_3621 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPTS_3621 IPR001764 Glycoside hydrolase, family 3, N-terminal YPTS_3621 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily YPTS_3623 IPR035906 MetI-like superfamily YPTS_3623 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3624 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3624 IPR035906 MetI-like superfamily YPTS_3625 IPR006059 Bacterial extracellular solute-binding protein YPTS_3626 IPR000843 LacI-type HTH domain YPTS_3626 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3626 IPR028082 Periplasmic binding protein-like I YPTS_3627 IPR012341 Six-hairpin glycosidase-like superfamily YPTS_3627 IPR033432 Glycosyl hydrolase 36, catalytic domain YPTS_3627 IPR008928 Six-hairpin glycosidase superfamily YPTS_3628 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3628 IPR040582 MalK, OB fold domain YPTS_3628 IPR017871 ABC transporter, conserved site YPTS_3628 IPR003439 ABC transporter-like YPTS_3628 IPR003593 AAA+ ATPase domain YPTS_3628 IPR005116 Transport-associated OB, type 1 YPTS_3628 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_3632 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_3632 IPR024973 ESPR domain YPTS_3632 IPR011050 Pectin lyase fold/virulence factor YPTS_3632 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_3632 IPR006914 VENN motif-containing domain YPTS_3632 IPR025157 Hemagglutinin repeat YPTS_3632 IPR012334 Pectin lyase fold YPTS_3637 IPR006914 VENN motif-containing domain YPTS_3637 IPR025157 Hemagglutinin repeat YPTS_3637 IPR033799 CDI toxin, EC869-like YPTS_3638 IPR009888 Immunity protein CdiI, Proteobacteria type YPTS_3638 IPR037891 Immunity protein Cdil-like superfamily YPTS_3639 IPR006914 VENN motif-containing domain YPTS_3639 IPR025157 Hemagglutinin repeat YPTS_3639 IPR033799 CDI toxin, EC869-like YPTS_3641 IPR024973 ESPR domain YPTS_3641 IPR025157 Hemagglutinin repeat YPTS_3641 IPR012334 Pectin lyase fold YPTS_3641 IPR011050 Pectin lyase fold/virulence factor YPTS_3641 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_3641 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_3641 IPR006914 VENN motif-containing domain YPTS_3643 IPR012334 Pectin lyase fold YPTS_3643 IPR006914 VENN motif-containing domain YPTS_3643 IPR025157 Hemagglutinin repeat YPTS_3643 IPR011050 Pectin lyase fold/virulence factor YPTS_3643 IPR028190 Novel toxin 21 YPTS_3643 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_3643 IPR008619 Filamentous haemagglutinin repeat YPTS_3643 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_3643 IPR038181 Novel toxin 21 superfamily YPTS_3645 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_3645 IPR024973 ESPR domain YPTS_3645 IPR011050 Pectin lyase fold/virulence factor YPTS_3645 IPR025157 Hemagglutinin repeat YPTS_3645 IPR006914 VENN motif-containing domain YPTS_3645 IPR012334 Pectin lyase fold YPTS_3645 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_3646 IPR027282 Two partner secretion pathway transporter YPTS_3646 IPR035251 ShlB, POTRA domain YPTS_3646 IPR034746 POTRA domain YPTS_3646 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_3646 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_3647 IPR011392 Tellurite resistance, TerY YPTS_3647 IPR036465 von Willebrand factor A-like domain superfamily YPTS_3647 IPR002035 von Willebrand factor, type A YPTS_3648 IPR003325 TerD domain YPTS_3649 IPR002035 von Willebrand factor, type A YPTS_3649 IPR036465 von Willebrand factor A-like domain superfamily YPTS_3649 IPR011392 Tellurite resistance, TerY YPTS_3650 IPR011392 Tellurite resistance, TerY YPTS_3650 IPR002035 von Willebrand factor, type A YPTS_3650 IPR036465 von Willebrand factor A-like domain superfamily YPTS_3653 IPR005325 Protein of unknown function DUF308, membrane YPTS_3654 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPTS_3654 IPR023753 FAD/NAD(P)-binding domain YPTS_3654 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3654 IPR013785 Aldolase-type TIM barrel YPTS_3655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3655 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_3655 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPTS_3655 IPR007848 Methyltransferase small domain YPTS_3656 IPR036709 Autotransporter beta-domain superfamily YPTS_3656 IPR006315 Outer membrane autotransporter barrel YPTS_3656 IPR011050 Pectin lyase fold/virulence factor YPTS_3656 IPR005546 Autotransporter beta-domain YPTS_3657 IPR002725 Protein of unknown function DUF45 YPTS_3658 IPR036291 NAD(P)-binding domain superfamily YPTS_3658 IPR000683 Oxidoreductase, N-terminal YPTS_3659 IPR036458 Sodium:dicarboxylate symporter superfamily YPTS_3659 IPR001991 Sodium:dicarboxylate symporter YPTS_3659 IPR023025 Serine/threonine transporter SstT YPTS_3660 IPR026267 Inner membrane protein YgjV YPTS_3660 IPR019629 Uncharacterised protein family HI1736/YgjV YPTS_3661 IPR013974 SAF domain YPTS_3661 IPR007392 D-galactarate/Altronate dehydratase, C-terminal YPTS_3662 IPR023668 Altronate oxidoreductase YPTS_3662 IPR036291 NAD(P)-binding domain superfamily YPTS_3662 IPR013131 Mannitol dehydrogenase, N-terminal YPTS_3662 IPR013118 Mannitol dehydrogenase, C-terminal YPTS_3662 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_3662 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_3663 IPR003766 Uronate isomerase YPTS_3663 IPR032466 Metal-dependent hydrolase YPTS_3664 IPR011701 Major facilitator superfamily YPTS_3664 IPR036259 MFS transporter superfamily YPTS_3664 IPR020846 Major facilitator superfamily domain YPTS_3665 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3665 IPR000524 Transcription regulator HTH, GntR YPTS_3665 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTS_3665 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3665 IPR011711 GntR, C-terminal YPTS_3667 IPR032818 DedA family YPTS_3667 IPR032816 SNARE associated Golgi protein YPTS_3668 IPR026574 Modulator protein MzrA YPTS_3668 IPR027398 SecD export protein N-terminal TM domain YPTS_3670 IPR010279 Inner membrane protein YqjD/ElaB YPTS_3671 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPTS_3673 IPR032808 DoxX family YPTS_3674 IPR004045 Glutathione S-transferase, N-terminal YPTS_3674 IPR040079 Glutathione Transferase family YPTS_3674 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTS_3674 IPR036249 Thioredoxin-like superfamily YPTS_3674 IPR016639 Glutathione S-transferase Omega/GSH YPTS_3674 IPR010987 Glutathione S-transferase, C-terminal-like YPTS_3675 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3675 IPR005119 LysR, substrate-binding YPTS_3675 IPR000847 Transcription regulator HTH, LysR YPTS_3675 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3676 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPTS_3676 IPR014710 RmlC-like jelly roll fold YPTS_3676 IPR012093 Pirin YPTS_3676 IPR011051 RmlC-like cupin domain superfamily YPTS_3676 IPR003829 Pirin, N-terminal domain YPTS_3677 IPR035996 Tetrapyrrole methylase superfamily YPTS_3677 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPTS_3677 IPR008189 rRNA small subunit methyltransferase I YPTS_3677 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTS_3677 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTS_3677 IPR000878 Tetrapyrrole methylase YPTS_3678 IPR028082 Periplasmic binding protein-like I YPTS_3678 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_3678 IPR007443 Penicillin-binding protein activator LpoA YPTS_3679 IPR011335 Restriction endonuclease type II-like YPTS_3679 IPR011856 tRNA endonuclease-like domain superfamily YPTS_3679 IPR003509 Uncharacterised protein family UPF0102 YPTS_3680 IPR035461 GmhA/DiaA YPTS_3680 IPR001347 Sugar isomerase (SIS) YPTS_3680 IPR023070 DnaA initiator-associating protein YPTS_3681 IPR014004 Transport-associated and nodulation domain, bacteria YPTS_3681 IPR007055 BON domain YPTS_3682 IPR001264 Glycosyl transferase, family 51 YPTS_3682 IPR023346 Lysozyme-like domain superfamily YPTS_3682 IPR011812 Biosynthetic peptidoglycan transglycosylase YPTS_3682 IPR036950 Penicillin binding protein transglycosylase domain YPTS_3683 IPR026041 Glyoxalase ElbB YPTS_3683 IPR029062 Class I glutamine amidotransferase-like YPTS_3684 IPR036641 HPT domain superfamily YPTS_3684 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_3684 IPR013767 PAS fold YPTS_3684 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_3684 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_3684 IPR011006 CheY-like superfamily YPTS_3684 IPR035965 PAS domain superfamily YPTS_3684 IPR005467 Histidine kinase domain YPTS_3684 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_3684 IPR001789 Signal transduction response regulator, receiver domain YPTS_3684 IPR000014 PAS domain YPTS_3684 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily YPTS_3684 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPTS_3684 IPR040642 Histidine kinase receptor ArcB, transmembrane domain YPTS_3684 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPTS_3684 IPR000700 PAS-associated, C-terminal YPTS_3684 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3686 IPR039661 ELP3/YhcC YPTS_3686 IPR032432 Radical SAM, C-terminal extension YPTS_3686 IPR007197 Radical SAM YPTS_3686 IPR006638 Elp3/MiaB/NifB YPTS_3686 IPR005911 Protein YhcC-like YPTS_3686 IPR023404 Radical SAM, alpha/beta horseshoe YPTS_3687 IPR002932 Glutamate synthase domain YPTS_3687 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPTS_3687 IPR017932 Glutamine amidotransferase type 2 domain YPTS_3687 IPR013785 Aldolase-type TIM barrel YPTS_3687 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_3687 IPR006982 Glutamate synthase, central-N YPTS_3687 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily YPTS_3688 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_3688 IPR028261 Dihydroprymidine dehydrogenase domain II YPTS_3688 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3688 IPR009051 Alpha-helical ferredoxin YPTS_3688 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPTS_3688 IPR023753 FAD/NAD(P)-binding domain YPTS_3690 IPR036760 SspB-like superfamily YPTS_3690 IPR007481 Stringent starvation protein B YPTS_3691 IPR040079 Glutathione Transferase family YPTS_3691 IPR004045 Glutathione S-transferase, N-terminal YPTS_3691 IPR004046 Glutathione S-transferase, C-terminal YPTS_3691 IPR034341 Stringent starvation protein A, N-terminal YPTS_3691 IPR036249 Thioredoxin-like superfamily YPTS_3691 IPR010987 Glutathione S-transferase, C-terminal-like YPTS_3691 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTS_3692 IPR023035 Ribosomal protein S9, bacterial/plastid YPTS_3692 IPR000754 Ribosomal protein S9 YPTS_3692 IPR020574 Ribosomal protein S9, conserved site YPTS_3692 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_3692 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_3693 IPR005823 Ribosomal protein L13, bacterial-type YPTS_3693 IPR005822 Ribosomal protein L13 YPTS_3693 IPR023563 Ribosomal protein L13, conserved site YPTS_3693 IPR036899 Ribosomal protein L13 superfamily YPTS_3694 IPR030870 Cell division protein ZapE YPTS_3694 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3694 IPR005654 ATPase, AFG1-like YPTS_3696 IPR009386 Protein of unknown function DUF1043 YPTS_3697 IPR001478 PDZ domain YPTS_3697 IPR036034 PDZ superfamily YPTS_3697 IPR011782 Peptidase S1C, Do YPTS_3697 IPR009003 Peptidase S1, PA clan YPTS_3697 IPR001940 Peptidase S1C YPTS_3698 IPR011783 Peptidase S1C, DegS YPTS_3698 IPR001940 Peptidase S1C YPTS_3698 IPR001478 PDZ domain YPTS_3698 IPR009003 Peptidase S1, PA clan YPTS_3698 IPR036034 PDZ superfamily YPTS_3699 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPTS_3699 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPTS_3699 IPR036968 Enolpyruvate transferase domain superfamily YPTS_3699 IPR001986 Enolpyruvate transferase domain YPTS_3700 IPR002634 BolA protein YPTS_3700 IPR036065 BolA-like superfamily YPTS_3701 IPR002645 STAS domain YPTS_3701 IPR036513 STAS domain superfamily YPTS_3702 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPTS_3702 IPR042245 Tgt2/MlaC superfamily YPTS_3703 IPR003399 Mce/MlaD YPTS_3703 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD YPTS_3704 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPTS_3704 IPR030802 ABC transporter permease MalE YPTS_3705 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3705 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl YPTS_3705 IPR017871 ABC transporter, conserved site YPTS_3705 IPR003439 ABC transporter-like YPTS_3705 IPR003593 AAA+ ATPase domain YPTS_3706 IPR004481 Sodium/potassium/calcium exchanger YPTS_3706 IPR004837 Sodium/calcium exchanger membrane region YPTS_3707 IPR035474 KpsF-like, SIS domain YPTS_3707 IPR001347 Sugar isomerase (SIS) YPTS_3707 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPTS_3707 IPR000644 CBS domain YPTS_3708 IPR023214 HAD superfamily YPTS_3708 IPR036412 HAD-like superfamily YPTS_3708 IPR010023 KdsC family YPTS_3709 IPR026265 Lipopolysaccharide export system protein LptC YPTS_3709 IPR010664 Lipopolysaccharide assembly, LptC-related YPTS_3710 IPR005653 Organic solvent tolerance-like, N-terminal YPTS_3710 IPR014340 Lipopolysaccharide export system protein LptA YPTS_3711 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPTS_3711 IPR017871 ABC transporter, conserved site YPTS_3711 IPR003593 AAA+ ATPase domain YPTS_3711 IPR030921 LPS export ABC transporter, ATP-binding protein LptB YPTS_3711 IPR003439 ABC transporter-like YPTS_3711 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3712 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily YPTS_3712 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPTS_3712 IPR000394 RNA polymerase sigma factor 54 YPTS_3712 IPR007046 RNA polymerase sigma factor 54, core-binding domain YPTS_3713 IPR036567 Ribosome hibernation promotion factor-like YPTS_3713 IPR003489 Ribosome hibernation promoting factor/RaiA YPTS_3714 IPR002178 PTS EIIA type-2 domain YPTS_3714 IPR016152 Phosphotransferase/anion transporter YPTS_3714 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPTS_3715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3715 IPR005337 RapZ-like family YPTS_3716 IPR035895 HPr-like superfamily YPTS_3716 IPR000032 Phosphocarrier protein HPr-like YPTS_3716 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPTS_3716 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPTS_3717 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPTS_3717 IPR002082 Aspartate carbamoyltransferase YPTS_3717 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPTS_3717 IPR006130 Aspartate/ornithine carbamoyltransferase YPTS_3717 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPTS_3718 IPR002801 Aspartate transcarbamylase regulatory subunit YPTS_3718 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPTS_3718 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPTS_3718 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily YPTS_3718 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YPTS_3719 IPR006175 YjgF/YER057c/UK114 family YPTS_3719 IPR035959 RutC-like superfamily YPTS_3719 IPR019897 RidA, conserved site YPTS_3719 IPR006056 RidA family YPTS_3721 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3721 IPR000843 LacI-type HTH domain YPTS_3721 IPR012771 Trehalose operon repressor YPTS_3721 IPR028082 Periplasmic binding protein-like I YPTS_3722 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPTS_3722 IPR013013 Phosphotransferase system, EIIC component, type 1 YPTS_3722 IPR001996 Phosphotransferase system, IIB component, type 1 YPTS_3722 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPTS_3722 IPR003352 Phosphotransferase system, EIIC YPTS_3722 IPR036878 Glucose permease domain IIB YPTS_3722 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPTS_3723 IPR017853 Glycoside hydrolase superfamily YPTS_3723 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTS_3723 IPR012769 Trehalose-6-phosphate hydrolase YPTS_3723 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPTS_3723 IPR013780 Glycosyl hydrolase, all-beta YPTS_3724 IPR028625 Regulator of nucleoside diphosphate kinase YPTS_3724 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPTS_3724 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTS_3724 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTS_3724 IPR023459 Transcription elongation factor GreA/GreB family YPTS_3725 IPR009155 Cytochrome b562 YPTS_3725 IPR010980 Cytochrome c/b562 YPTS_3727 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPTS_3727 IPR002510 Metalloprotease TldD/PmbA YPTS_3727 IPR036059 Metalloprotease TldD/PmbA superfamily YPTS_3728 IPR023153 PSPTO4464-like domain superfamily YPTS_3728 IPR006839 Ribosome-associated, YjgA YPTS_3729 IPR000468 Barstar (barnase inhibitor) YPTS_3729 IPR035905 Barstar-like superfamily YPTS_3731 IPR016161 Aldehyde/histidinol dehydrogenase YPTS_3731 IPR010102 Succinate semialdehyde dehydrogenase YPTS_3731 IPR015590 Aldehyde dehydrogenase domain YPTS_3731 IPR016163 Aldehyde dehydrogenase, C-terminal YPTS_3731 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPTS_3731 IPR016160 Aldehyde dehydrogenase, cysteine active site YPTS_3731 IPR016162 Aldehyde dehydrogenase, N-terminal YPTS_3732 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPTS_3732 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPTS_3733 IPR006143 RND efflux pump, membrane fusion protein YPTS_3733 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPTS_3733 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPTS_3734 IPR012451 Protein of unknown function DUF1656 YPTS_3735 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3735 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3735 IPR005119 LysR, substrate-binding YPTS_3735 IPR000847 Transcription regulator HTH, LysR YPTS_3738 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain YPTS_3738 IPR041079 Neuraminidase-like domain YPTS_3739 IPR022044 Insecticide toxin TcdB middle/C-terminal YPTS_3739 IPR022045 Insecticide toxin TcdB middle/N-terminal YPTS_3739 IPR003284 Salmonella virulence plasmid 65kDa B protein YPTS_3744 IPR041508 Toxin complex C-like repeat YPTS_3744 IPR025968 YwqJ-like deaminase YPTS_3744 IPR022385 Rhs repeat-associated core YPTS_3745 IPR025502 TldD YPTS_3745 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPTS_3745 IPR002510 Metalloprotease TldD/PmbA YPTS_3745 IPR036059 Metalloprotease TldD/PmbA superfamily YPTS_3746 IPR036526 Carbon-nitrogen hydrolase superfamily YPTS_3746 IPR001110 Uncharacterised protein family UPF0012, conserved site YPTS_3746 IPR003010 Carbon-nitrogen hydrolase YPTS_3747 IPR032712 AsmA-like, C-terminal YPTS_3747 IPR011836 Conserved hypothetical protein CHP02099 YPTS_3747 IPR025263 Domain of unknown function DUF3971 YPTS_3748 IPR003029 S1 domain YPTS_3748 IPR022967 RNA-binding domain, S1 YPTS_3748 IPR004659 Ribonuclease E/G YPTS_3748 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPTS_3748 IPR012340 Nucleic acid-binding, OB-fold YPTS_3749 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPTS_3749 IPR029001 Inosine triphosphate pyrophosphatase-like YPTS_3750 IPR007227 Cell shape-determining protein MreD YPTS_3750 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPTS_3751 IPR007221 Rod shape-determining protein MreC YPTS_3751 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 YPTS_3751 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 YPTS_3752 IPR004753 Cell shape determining protein MreB YPTS_3753 IPR000160 GGDEF domain YPTS_3753 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPTS_3753 IPR035919 EAL domain superfamily YPTS_3753 IPR001633 EAL domain YPTS_3753 IPR029787 Nucleotide cyclase YPTS_3754 IPR020843 Polyketide synthase, enoylreductase domain YPTS_3754 IPR011032 GroES-like superfamily YPTS_3754 IPR036291 NAD(P)-binding domain superfamily YPTS_3754 IPR013149 Alcohol dehydrogenase, C-terminal YPTS_3754 IPR013154 Alcohol dehydrogenase, N-terminal YPTS_3754 IPR014188 Acrylyl-CoA reductase AcuI YPTS_3755 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP YPTS_3755 IPR000572 Oxidoreductase, molybdopterin-binding domain YPTS_3755 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily YPTS_3756 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ YPTS_3756 IPR013130 Ferric reductase transmembrane component-like domain YPTS_3757 IPR001874 Dehydroquinase, class II YPTS_3757 IPR018509 Dehydroquinase, class II, conserved site YPTS_3757 IPR036441 Dehydroquinase, class II superfamily YPTS_3758 IPR001882 Biotin-binding site YPTS_3758 IPR011053 Single hybrid motif YPTS_3758 IPR001249 Acetyl-CoA biotin carboxyl carrier YPTS_3758 IPR000089 Biotin/lipoyl attachment YPTS_3759 IPR005482 Biotin carboxylase, C-terminal YPTS_3759 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPTS_3759 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPTS_3759 IPR011761 ATP-grasp fold YPTS_3759 IPR011764 Biotin carboxylation domain YPTS_3759 IPR013815 ATP-grasp fold, subdomain 1 YPTS_3759 IPR005481 Biotin carboxylase-like, N-terminal domain YPTS_3759 IPR016185 Pre-ATP-grasp domain superfamily YPTS_3759 IPR011054 Rudiment single hybrid motif YPTS_3761 IPR010398 Protein of unknown function DUF997 YPTS_3762 IPR038377 Sodium/glucose symporter superfamily YPTS_3762 IPR018212 Sodium/solute symporter, conserved site YPTS_3762 IPR001734 Sodium/solute symporter YPTS_3762 IPR011849 Sodium/pantothenate symporter YPTS_3763 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3763 IPR004498 Ribosomal protein L11 methyltransferase YPTS_3764 IPR001269 tRNA-dihydrouridine synthase YPTS_3764 IPR018517 tRNA-dihydrouridine synthase, conserved site YPTS_3764 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPTS_3764 IPR032887 tRNA-dihydrouridine synthase B YPTS_3764 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPTS_3764 IPR035587 DUS-like, FMN-binding domain YPTS_3764 IPR013785 Aldolase-type TIM barrel YPTS_3765 IPR002197 DNA binding HTH domain, Fis-type YPTS_3765 IPR009057 Homeobox-like domain superfamily YPTS_3765 IPR005412 DNA-binding protein Fis YPTS_3768 IPR004736 MFS transporter, metabolite:H symporter YPTS_3768 IPR005829 Sugar transporter, conserved site YPTS_3768 IPR020846 Major facilitator superfamily domain YPTS_3768 IPR036259 MFS transporter superfamily YPTS_3768 IPR011701 Major facilitator superfamily YPTS_3769 IPR012788 4-carboxymuconolactone decarboxylase YPTS_3769 IPR029032 AhpD-like YPTS_3769 IPR003779 Carboxymuconolactone decarboxylase-like YPTS_3770 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_3770 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_3770 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPTS_3770 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPTS_3770 IPR015815 3-hydroxyisobutyrate dehydrogenase-related YPTS_3770 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPTS_3770 IPR036291 NAD(P)-binding domain superfamily YPTS_3771 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPTS_3771 IPR001279 Metallo-beta-lactamase YPTS_3772 IPR008816 Glycine zipper 2TM domain YPTS_3774 IPR011129 Cold shock domain YPTS_3774 IPR019844 Cold-shock (CSD) domain YPTS_3774 IPR002059 Cold-shock protein, DNA-binding YPTS_3774 IPR012156 Cold shock, CspA YPTS_3774 IPR012340 Nucleic acid-binding, OB-fold YPTS_3775 IPR012156 Cold shock, CspA YPTS_3775 IPR011129 Cold shock domain YPTS_3775 IPR019844 Cold-shock (CSD) domain YPTS_3775 IPR002059 Cold-shock protein, DNA-binding YPTS_3775 IPR012340 Nucleic acid-binding, OB-fold YPTS_3776 IPR012340 Nucleic acid-binding, OB-fold YPTS_3776 IPR012156 Cold shock, CspA YPTS_3776 IPR002059 Cold-shock protein, DNA-binding YPTS_3776 IPR011129 Cold shock domain YPTS_3776 IPR019844 Cold-shock (CSD) domain YPTS_3780 IPR036249 Thioredoxin-like superfamily YPTS_3780 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPTS_3780 IPR040079 Glutathione Transferase family YPTS_3780 IPR010987 Glutathione S-transferase, C-terminal-like YPTS_3780 IPR004045 Glutathione S-transferase, N-terminal YPTS_3781 IPR035474 KpsF-like, SIS domain YPTS_3781 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPTS_3781 IPR001347 Sugar isomerase (SIS) YPTS_3781 IPR000644 CBS domain YPTS_3782 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_3782 IPR000577 Carbohydrate kinase, FGGY YPTS_3782 IPR005929 Ribulokinase YPTS_3782 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_3784 IPR001851 ABC transporter, permease YPTS_3785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3785 IPR015861 ABC transporter, ribose import, RbsA YPTS_3785 IPR017871 ABC transporter, conserved site YPTS_3785 IPR003439 ABC transporter-like YPTS_3785 IPR003593 AAA+ ATPase domain YPTS_3787 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPTS_3787 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP YPTS_3787 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPTS_3789 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPTS_3789 IPR038770 Sodium/solute symporter superfamily YPTS_3789 IPR018422 Cation/H+ exchanger, CPA1 family YPTS_3789 IPR006153 Cation/H+ exchanger YPTS_3790 IPR006043 Xanthine/uracil/vitamin C permease YPTS_3791 IPR026262 Antitoxin DinJ YPTS_3791 IPR013321 Arc-type ribbon-helix-helix YPTS_3791 IPR007337 RelB antitoxin/Antitoxin DinJ YPTS_3792 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3792 IPR003439 ABC transporter-like YPTS_3792 IPR017871 ABC transporter, conserved site YPTS_3792 IPR003593 AAA+ ATPase domain YPTS_3792 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB YPTS_3793 IPR035906 MetI-like superfamily YPTS_3793 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3794 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPTS_3794 IPR036661 Luciferase-like domain superfamily YPTS_3794 IPR011251 Luciferase-like domain YPTS_3795 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_3795 IPR010067 Aliphatic sulfonates-binding protein YPTS_3795 IPR015168 SsuA/THI5-like YPTS_3796 IPR020048 NADPH-dependent FMN reductase, SsuE YPTS_3796 IPR005025 NADPH-dependent FMN reductase-like YPTS_3796 IPR029039 Flavoprotein-like superfamily YPTS_3798 IPR002139 Ribokinase/fructokinase YPTS_3798 IPR011877 Ribokinase YPTS_3798 IPR029056 Ribokinase-like YPTS_3798 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_3798 IPR011611 Carbohydrate kinase PfkB YPTS_3799 IPR023064 D-ribose pyranase YPTS_3799 IPR023750 RbsD-like superfamily YPTS_3799 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPTS_3800 IPR003313 AraC-type arabinose-binding/dimerisation domain YPTS_3800 IPR009057 Homeobox-like domain superfamily YPTS_3800 IPR037923 Transcription regulator HTH-like YPTS_3800 IPR018060 DNA binding HTH domain, AraC-type YPTS_3800 IPR018062 HTH domain AraC-type, conserved site YPTS_3801 IPR004104 Oxidoreductase, C-terminal YPTS_3801 IPR036291 NAD(P)-binding domain superfamily YPTS_3801 IPR000683 Oxidoreductase, N-terminal YPTS_3803 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTS_3803 IPR006531 Gp5 N-terminal YPTS_3803 IPR037026 Vgr protein, OB-fold domain superfamily YPTS_3803 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTS_3805 IPR006530 YD repeat YPTS_3805 IPR031325 RHS repeat YPTS_3805 IPR001826 RHS protein YPTS_3805 IPR022385 Rhs repeat-associated core YPTS_3807 IPR037026 Vgr protein, OB-fold domain superfamily YPTS_3807 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPTS_3807 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPTS_3807 IPR006531 Gp5 N-terminal YPTS_3813 IPR018368 ClpA/B, conserved site 1 YPTS_3813 IPR001270 ClpA/B family YPTS_3813 IPR004176 Clp, N-terminal YPTS_3813 IPR036628 Clp, N-terminal domain superfamily YPTS_3813 IPR019489 Clp ATPase, C-terminal YPTS_3813 IPR017729 Type VI secretion system, ATPase ClpV1 YPTS_3813 IPR003959 ATPase, AAA-type, core YPTS_3813 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3813 IPR041546 ClpA/ClpB, AAA lid domain YPTS_3813 IPR003593 AAA+ ATPase domain YPTS_3823 IPR008514 Type VI secretion system effector, Hcp YPTS_3823 IPR036624 Hcp1-like superfamily YPTS_3826 IPR010794 Maltose operon periplasmic YPTS_3827 IPR036998 Porin, LamB-type superfamily YPTS_3827 IPR003192 Porin, LamB-type YPTS_3827 IPR023738 Maltoporin YPTS_3828 IPR017871 ABC transporter, conserved site YPTS_3828 IPR040582 MalK, OB fold domain YPTS_3828 IPR003593 AAA+ ATPase domain YPTS_3828 IPR003439 ABC transporter-like YPTS_3828 IPR008995 Molybdate/tungstate binding, C-terminal YPTS_3828 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPTS_3828 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3830 IPR006059 Bacterial extracellular solute-binding protein YPTS_3830 IPR006061 Solute-binding family 1, conserved site YPTS_3830 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPTS_3831 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like YPTS_3831 IPR035277 MalF, N-terminal YPTS_3831 IPR035906 MetI-like superfamily YPTS_3831 IPR029345 Maltose transport system permease protein MalF, P2 domain YPTS_3831 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3832 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3832 IPR035906 MetI-like superfamily YPTS_3833 IPR020948 Phosphate-starvation-induced PsiE-like YPTS_3833 IPR009315 Phosphate-starvation-induced PsiE YPTS_3835 IPR001672 Phosphoglucose isomerase (PGI) YPTS_3835 IPR035476 Phosphoglucose isomerase, SIS domain 1 YPTS_3835 IPR018189 Phosphoglucose isomerase, conserved site YPTS_3835 IPR023096 Phosphoglucose isomerase, C-terminal YPTS_3835 IPR035482 Phosphoglucose isomerase, SIS domain 2 YPTS_3836 IPR001048 Aspartate/glutamate/uridylate kinase YPTS_3836 IPR018042 Aspartate kinase, conserved site YPTS_3836 IPR001341 Aspartate kinase YPTS_3836 IPR036393 Acetylglutamate kinase-like superfamily YPTS_3836 IPR002912 ACT domain YPTS_3836 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain YPTS_3836 IPR005260 Aspartate kinase, monofunctional class YPTS_3837 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_3837 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_3837 IPR034746 POTRA domain YPTS_3837 IPR035251 ShlB, POTRA domain YPTS_3837 IPR027282 Two partner secretion pathway transporter YPTS_3838 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_3838 IPR011050 Pectin lyase fold/virulence factor YPTS_3838 IPR012334 Pectin lyase fold YPTS_3838 IPR025157 Hemagglutinin repeat YPTS_3839 IPR006158 Cobalamin (vitamin B12)-binding domain YPTS_3839 IPR033706 Methionine synthase, B12-binding domain YPTS_3839 IPR036724 Cobalamin-binding domain superfamily YPTS_3839 IPR011822 Cobalamin-dependent methionine synthase YPTS_3839 IPR036594 Methionine synthase domain YPTS_3839 IPR003726 Homocysteine-binding domain YPTS_3839 IPR000489 Pterin-binding domain YPTS_3839 IPR036589 Homocysteine-binding domain superfamily YPTS_3839 IPR011005 Dihydropteroate synthase-like YPTS_3839 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPTS_3839 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPTS_3839 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily YPTS_3840 IPR005471 Transcription regulator IclR, N-terminal YPTS_3840 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3840 IPR029016 GAF-like domain superfamily YPTS_3840 IPR014757 Transcription regulator IclR, C-terminal YPTS_3840 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3841 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPTS_3842 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPTS_3842 IPR040442 Pyruvate kinase-like domain superfamily YPTS_3842 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPTS_3842 IPR039556 ICL/PEPM domain YPTS_3842 IPR006254 Isocitrate lyase YPTS_3843 IPR019830 Malate synthase, conserved site YPTS_3843 IPR001465 Malate synthase YPTS_3843 IPR006252 Malate synthase A YPTS_3843 IPR011076 Malate synthase-like superfamily YPTS_3844 IPR005697 Homoserine O-succinyltransferase MetA YPTS_3844 IPR029062 Class I glutamine amidotransferase-like YPTS_3844 IPR033752 MetA family YPTS_3851 IPR001451 Hexapeptide repeat YPTS_3851 IPR011004 Trimeric LpxA-like superfamily YPTS_3852 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPTS_3852 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPTS_3852 IPR011342 Shikimate dehydrogenase YPTS_3852 IPR041121 SDH, C-terminal YPTS_3852 IPR036291 NAD(P)-binding domain superfamily YPTS_3852 IPR022893 Shikimate dehydrogenase family YPTS_3853 IPR023535 Threonylcarbamoyl-AMP synthase YPTS_3853 IPR006070 YrdC-like domain YPTS_3853 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPTS_3854 IPR013498 DNA topoisomerase, type IA, zn finger YPTS_3854 IPR000380 DNA topoisomerase, type IA YPTS_3855 IPR007456 Smg YPTS_3856 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3856 IPR041614 DprA, winged helix domain YPTS_3856 IPR003488 DNA recombination-mediator protein A YPTS_3857 IPR036821 Peptide deformylase superfamily YPTS_3857 IPR023635 Peptide deformylase YPTS_3858 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain YPTS_3858 IPR005794 Methionyl-tRNA formyltransferase YPTS_3858 IPR005793 Formyl transferase, C-terminal YPTS_3858 IPR037022 Formyl transferase, C-terminal domain superfamily YPTS_3858 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPTS_3858 IPR002376 Formyl transferase, N-terminal YPTS_3858 IPR036477 Formyl transferase, N-terminal domain superfamily YPTS_3858 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPTS_3859 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3859 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPTS_3859 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type YPTS_3859 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPTS_3859 IPR004573 rRNA small subunit methyltransferase B YPTS_3859 IPR023267 RNA (C5-cytosine) methyltransferase YPTS_3859 IPR035926 NusB-like superfamily YPTS_3859 IPR006027 NusB/RsmB/TIM44 YPTS_3860 IPR036291 NAD(P)-binding domain superfamily YPTS_3860 IPR006037 Regulator of K+ conductance, C-terminal YPTS_3860 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTS_3860 IPR003148 Regulator of K+ conductance, N-terminal YPTS_3860 IPR006036 Potassium uptake protein TrkA YPTS_3861 IPR036019 Gated mechanosensitive channel YPTS_3861 IPR019823 Large-conductance mechanosensitive channel, conserved site YPTS_3861 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L YPTS_3861 IPR001185 Large-conductance mechanosensitive channel YPTS_3862 IPR005589 Alternative ribosome-rescue factor A YPTS_3863 IPR009061 Putative DNA-binding domain superfamily YPTS_3863 IPR011788 Zn(II)-responsive transcriptional regulator YPTS_3863 IPR000551 MerR-type HTH domain YPTS_3864 IPR036373 Ribosomal protein L17 superfamily YPTS_3864 IPR000456 Ribosomal protein L17 YPTS_3865 IPR011262 DNA-directed RNA polymerase, insert domain YPTS_3865 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPTS_3865 IPR011773 DNA-directed RNA polymerase, alpha subunit YPTS_3865 IPR036603 RNA polymerase, RBP11-like subunit YPTS_3865 IPR036643 DNA-directed RNA polymerase, insert domain superfamily YPTS_3865 IPR011260 RNA polymerase, alpha subunit, C-terminal YPTS_3866 IPR018079 Ribosomal protein S4, conserved site YPTS_3866 IPR002942 RNA-binding S4 domain YPTS_3866 IPR036986 RNA-binding S4 domain superfamily YPTS_3866 IPR005709 Ribosomal protein S4, bacterial-type YPTS_3866 IPR001912 Ribosomal protein S4/S9, N-terminal YPTS_3866 IPR022801 Ribosomal protein S4/S9 YPTS_3867 IPR019981 Ribosomal protein S11, bacterial-type YPTS_3867 IPR018102 Ribosomal S11, conserved site YPTS_3867 IPR001971 Ribosomal protein S11 YPTS_3867 IPR036967 Ribosomal protein S11 superfamily YPTS_3868 IPR019980 Ribosomal protein S13, bacterial-type YPTS_3868 IPR018269 Ribosomal protein S13, conserved site YPTS_3868 IPR027437 30s ribosomal protein S13, C-terminal YPTS_3868 IPR001892 Ribosomal protein S13 YPTS_3868 IPR010979 Ribosomal protein S13-like, H2TH YPTS_3869 IPR000473 Ribosomal protein L36 YPTS_3869 IPR035977 Ribosomal protein L36 superfamily YPTS_3870 IPR026593 Protein translocase subunit SecY YPTS_3870 IPR002208 SecY/SEC61-alpha family YPTS_3870 IPR023201 SecY domain superfamily YPTS_3870 IPR030659 SecY conserved site YPTS_3871 IPR001196 Ribosomal protein L15, conserved site YPTS_3871 IPR021131 Ribosomal protein L18e/L15P YPTS_3871 IPR005749 Ribosomal protein L15, bacterial-type YPTS_3871 IPR036227 Ribosomal L18e/L15P superfamily YPTS_3871 IPR030878 Ribosomal protein L15 YPTS_3872 IPR018038 Ribosomal protein L30, conserved site YPTS_3872 IPR005996 Ribosomal protein L30, bacterial-type YPTS_3872 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPTS_3872 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily YPTS_3873 IPR000851 Ribosomal protein S5 YPTS_3873 IPR005712 Ribosomal protein S5, bacterial-type YPTS_3873 IPR013810 Ribosomal protein S5, N-terminal YPTS_3873 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_3873 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_3873 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPTS_3873 IPR005324 Ribosomal protein S5, C-terminal YPTS_3874 IPR004389 Ribosomal protein L18, bacterial-type YPTS_3874 IPR005484 Ribosomal protein L18 YPTS_3875 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily YPTS_3875 IPR019906 Ribosomal protein L6, bacterial-type YPTS_3875 IPR000702 Ribosomal protein L6 YPTS_3875 IPR020040 Ribosomal protein L6, alpha-beta domain YPTS_3875 IPR002358 Ribosomal protein L6, conserved site YPTS_3876 IPR035987 Ribosomal protein S8 superfamily YPTS_3876 IPR000630 Ribosomal protein S8 YPTS_3877 IPR018271 Ribosomal protein S14, conserved site YPTS_3877 IPR001209 Ribosomal protein S14 YPTS_3877 IPR023036 Ribosomal protein S14, bacterial/plastid YPTS_3878 IPR002132 Ribosomal protein L5 YPTS_3878 IPR020930 Ribosomal protein L5, bacterial-type YPTS_3878 IPR031309 Ribosomal protein L5, C-terminal YPTS_3878 IPR022803 Ribosomal protein L5 domain superfamily YPTS_3878 IPR031310 Ribosomal protein L5, N-terminal YPTS_3879 IPR005824 KOW YPTS_3879 IPR041988 Ribosomal Protein L26/L24, KOW domain YPTS_3879 IPR014722 Ribosomal protein L2, domain 2 YPTS_3879 IPR005825 Ribosomal protein L24/L26, conserved site YPTS_3879 IPR003256 Ribosomal protein L24 YPTS_3879 IPR008991 Translation protein SH3-like domain superfamily YPTS_3880 IPR000218 Ribosomal protein L14P YPTS_3880 IPR005745 Ribosomal protein L14P, bacterial-type YPTS_3880 IPR019972 Ribosomal protein L14P, conserved site YPTS_3880 IPR036853 Ribosomal protein L14 superfamily YPTS_3881 IPR000266 Ribosomal protein S17/S11 YPTS_3881 IPR012340 Nucleic acid-binding, OB-fold YPTS_3881 IPR019984 30S ribosomal protein S17 YPTS_3881 IPR019979 Ribosomal protein S17, conserved site YPTS_3882 IPR001854 Ribosomal protein L29/L35 YPTS_3882 IPR036049 Ribosomal protein L29/L35 superfamily YPTS_3882 IPR018254 Ribosomal protein L29, conserved site YPTS_3883 IPR000114 Ribosomal protein L16 YPTS_3883 IPR016180 Ribosomal protein L10e/L16 YPTS_3883 IPR036920 Ribosomal protein L10e/L16 superfamily YPTS_3883 IPR020798 Ribosomal protein L16, conserved site YPTS_3884 IPR001351 Ribosomal protein S3, C-terminal YPTS_3884 IPR004087 K Homology domain YPTS_3884 IPR018280 Ribosomal protein S3, conserved site YPTS_3884 IPR036419 Ribosomal protein S3, C-terminal domain superfamily YPTS_3884 IPR005704 Ribosomal protein S3, bacterial-type YPTS_3884 IPR009019 K homology domain superfamily, prokaryotic type YPTS_3884 IPR004044 K Homology domain, type 2 YPTS_3884 IPR015946 K homology domain-like, alpha/beta YPTS_3885 IPR036394 Ribosomal protein L22/L17 superfamily YPTS_3885 IPR018260 Ribosomal protein L22/L17, conserved site YPTS_3885 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPTS_3885 IPR001063 Ribosomal protein L22/L17 YPTS_3886 IPR002222 Ribosomal protein S19/S15 YPTS_3886 IPR023575 Ribosomal protein S19, superfamily YPTS_3886 IPR020934 Ribosomal protein S19 conserved site YPTS_3886 IPR005732 Ribosomal protein S19, bacterial-type YPTS_3887 IPR014726 Ribosomal protein L2, domain 3 YPTS_3887 IPR014722 Ribosomal protein L2, domain 2 YPTS_3887 IPR022669 Ribosomal protein L2, C-terminal YPTS_3887 IPR022671 Ribosomal protein L2, conserved site YPTS_3887 IPR022666 Ribosomal Proteins L2, RNA binding domain YPTS_3887 IPR008991 Translation protein SH3-like domain superfamily YPTS_3887 IPR012340 Nucleic acid-binding, OB-fold YPTS_3887 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPTS_3887 IPR002171 Ribosomal protein L2 YPTS_3888 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPTS_3888 IPR012678 Ribosomal protein L23/L15e core domain superfamily YPTS_3888 IPR001014 Ribosomal protein L23/L25, conserved site YPTS_3888 IPR013025 Ribosomal protein L25/L23 YPTS_3889 IPR002136 Ribosomal protein L4/L1e YPTS_3889 IPR023574 Ribosomal protein L4 domain superfamily YPTS_3889 IPR013005 50S ribosomal protein uL4 YPTS_3890 IPR019926 Ribosomal protein L3, conserved site YPTS_3890 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPTS_3890 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_3890 IPR000597 Ribosomal protein L3 YPTS_3891 IPR018268 Ribosomal protein S10, conserved site YPTS_3891 IPR001848 Ribosomal protein S10 YPTS_3891 IPR027486 Ribosomal protein S10 domain YPTS_3891 IPR036838 Ribosomal protein S10 domain superfamily YPTS_3892 IPR008331 Ferritin/DPS protein domain YPTS_3892 IPR009078 Ferritin-like superfamily YPTS_3892 IPR002024 Bacterioferritin YPTS_3892 IPR012347 Ferritin-like YPTS_3892 IPR009040 Ferritin-like diiron domain YPTS_3893 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTS_3893 IPR007419 BFD-like [2Fe-2S]-binding domain YPTS_3894 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_3894 IPR031157 Tr-type G domain, conserved site YPTS_3894 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3894 IPR033720 Elongation factor Tu, domain 2 YPTS_3894 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_3894 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPTS_3894 IPR005225 Small GTP-binding protein domain YPTS_3894 IPR000795 Transcription factor, GTP-binding domain YPTS_3894 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPTS_3894 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPTS_3894 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTS_3895 IPR031157 Tr-type G domain, conserved site YPTS_3895 IPR004540 Translation elongation factor EFG/EF2 YPTS_3895 IPR041095 Elongation Factor G, domain II YPTS_3895 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_3895 IPR000640 Elongation factor EFG, domain V-like YPTS_3895 IPR005517 Translation elongation factor EFG/EF2, domain IV YPTS_3895 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_3895 IPR000795 Transcription factor, GTP-binding domain YPTS_3895 IPR005225 Small GTP-binding protein domain YPTS_3895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_3895 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_3895 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3895 IPR035649 EFG, domain V YPTS_3895 IPR009022 Elongation factor G, domain III YPTS_3895 IPR035647 EF-G domain III/V-like YPTS_3896 IPR023798 Ribosomal protein S7 domain YPTS_3896 IPR000235 Ribosomal protein S5/S7 YPTS_3896 IPR020606 Ribosomal protein S7, conserved site YPTS_3896 IPR036823 Ribosomal protein S7 domain superfamily YPTS_3896 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPTS_3897 IPR012340 Nucleic acid-binding, OB-fold YPTS_3897 IPR006032 Ribosomal protein S12/S23 YPTS_3897 IPR005679 Ribosomal protein S12, bacterial-type YPTS_3898 IPR007215 Sulphur relay, TusB/DsrH YPTS_3898 IPR027396 DsrEFH-like YPTS_3898 IPR023526 Sulphur relay, TusB YPTS_3899 IPR027396 DsrEFH-like YPTS_3899 IPR037450 Sulphur relay, TusC YPTS_3899 IPR017462 Sulphur relay, TusC/DsrF YPTS_3899 IPR003787 Sulphur relay, DsrE/F-like protein YPTS_3900 IPR027396 DsrEFH-like YPTS_3900 IPR003787 Sulphur relay, DsrE/F-like protein YPTS_3900 IPR017463 Sulphur relay, TusD/DsrE YPTS_3901 IPR039446 Transcriptional regulator DauR-like YPTS_3901 IPR039445 Transcriptional regulator DauR-like, HTH domain YPTS_3901 IPR013559 YheO-like YPTS_3902 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTS_3902 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPTS_3902 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPTS_3903 IPR007236 SlyX YPTS_3904 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPTS_3905 IPR012658 Conserved hypothetical protein CHP02443 YPTS_3906 IPR036291 NAD(P)-binding domain superfamily YPTS_3906 IPR004771 K+/H+ exchanger YPTS_3906 IPR038770 Sodium/solute symporter superfamily YPTS_3906 IPR006153 Cation/H+ exchanger YPTS_3906 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPTS_3906 IPR003148 Regulator of K+ conductance, N-terminal YPTS_3907 IPR029039 Flavoprotein-like superfamily YPTS_3907 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPTS_3907 IPR003680 Flavodoxin-like fold YPTS_3908 IPR003593 AAA+ ATPase domain YPTS_3908 IPR032781 ABC-transporter extension domain YPTS_3908 IPR003439 ABC transporter-like YPTS_3908 IPR017871 ABC transporter, conserved site YPTS_3908 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3909 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_3909 IPR001173 Glycosyltransferase 2-like YPTS_3911 IPR003819 TauD/TfdA-like domain YPTS_3911 IPR042098 Taurine dioxygenase TauD-like superfamily YPTS_3912 IPR035906 MetI-like superfamily YPTS_3912 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_3913 IPR003593 AAA+ ATPase domain YPTS_3913 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3913 IPR015859 ABC transporter, taurine import, TauD YPTS_3913 IPR003439 ABC transporter-like YPTS_3913 IPR017871 ABC transporter, conserved site YPTS_3914 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_3914 IPR010068 Taurine ABC transporter, substrate-binding protein TauA YPTS_3914 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPTS_3915 IPR001123 Amino acid exporter protein, LeuE-type YPTS_3916 IPR029058 Alpha/Beta hydrolase fold YPTS_3916 IPR012020 AB hydrolase 4 family YPTS_3916 IPR000952 AB hydrolase 4, conserved site YPTS_3916 IPR000073 Alpha/beta hydrolase fold-1 YPTS_3917 IPR036685 YehU-like superfamily YPTS_3917 IPR010648 Uncharacterised protein family UPF0270 YPTS_3918 IPR006083 Phosphoribulokinase/uridine kinase YPTS_3918 IPR006082 Phosphoribulokinase YPTS_3918 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3920 IPR036102 OsmC/Ohr superfamily YPTS_3920 IPR015946 K homology domain-like, alpha/beta YPTS_3920 IPR003718 OsmC/Ohr family YPTS_3921 IPR014710 RmlC-like jelly roll fold YPTS_3921 IPR012318 Crp-type HTH domain YPTS_3921 IPR000595 Cyclic nucleotide-binding domain YPTS_3921 IPR018488 Cyclic nucleotide-binding, conserved site YPTS_3921 IPR018490 Cyclic nucleotide-binding-like YPTS_3921 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3921 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3921 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPTS_3922 IPR010020 Integral membrane protein, YccS/YhfK YPTS_3922 IPR032692 Integral membrane protein YccS, N-terminal YPTS_3924 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPTS_3924 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_3924 IPR005814 Aminotransferase class-III YPTS_3924 IPR004636 Acetylornithine/Succinylornithine transaminase family YPTS_3924 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPTS_3924 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_3925 IPR029062 Class I glutamine amidotransferase-like YPTS_3925 IPR017926 Glutamine amidotransferase YPTS_3925 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPTS_3926 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3926 IPR033186 Helicase HerA-like C-terminal YPTS_3927 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPTS_3927 IPR029000 Cyclophilin-like domain superfamily YPTS_3927 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPTS_3929 IPR019802 Glycoside hydrolase, family 4, conserved site YPTS_3929 IPR001088 Glycoside hydrolase, family 4 YPTS_3929 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPTS_3929 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPTS_3929 IPR036291 NAD(P)-binding domain superfamily YPTS_3930 IPR028082 Periplasmic binding protein-like I YPTS_3930 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3930 IPR000843 LacI-type HTH domain YPTS_3932 IPR023528 Major facilitator superfamily transporter, TsgA YPTS_3932 IPR011701 Major facilitator superfamily YPTS_3932 IPR036259 MFS transporter superfamily YPTS_3932 IPR020846 Major facilitator superfamily domain YPTS_3933 IPR032466 Metal-dependent hydrolase YPTS_3933 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPTS_3933 IPR013108 Amidohydrolase 3 YPTS_3935 IPR023753 FAD/NAD(P)-binding domain YPTS_3935 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPTS_3935 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPTS_3935 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPTS_3935 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPTS_3935 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPTS_3935 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal YPTS_3935 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3935 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPTS_3935 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPTS_3935 IPR007419 BFD-like [2Fe-2S]-binding domain YPTS_3936 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPTS_3936 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type YPTS_3936 IPR017881 Nitrite reductase (NADH) small subunit YPTS_3937 IPR000292 Formate/nitrite transporter YPTS_3937 IPR024002 Formate/nitrite transporter, conserved site YPTS_3937 IPR023271 Aquaporin-like YPTS_3938 IPR012409 Sirohaem synthase YPTS_3938 IPR036291 NAD(P)-binding domain superfamily YPTS_3938 IPR006366 Uroporphyrin-III C-methyltransferase YPTS_3938 IPR028281 Siroheme synthase, central domain YPTS_3938 IPR014776 Tetrapyrrole methylase, subdomain 2 YPTS_3938 IPR019478 Sirohaem synthase, dimerisation domain YPTS_3938 IPR006367 Sirohaem synthase, N-terminal YPTS_3938 IPR014777 Tetrapyrrole methylase, subdomain 1 YPTS_3938 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPTS_3938 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPTS_3938 IPR000878 Tetrapyrrole methylase YPTS_3938 IPR035996 Tetrapyrrole methylase superfamily YPTS_3939 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPTS_3939 IPR002306 Tryptophan-tRNA ligase YPTS_3939 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPTS_3939 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPTS_3939 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_3940 IPR037512 Phosphoglycolate phosphatase, prokaryotic YPTS_3940 IPR023214 HAD superfamily YPTS_3940 IPR036412 HAD-like superfamily YPTS_3940 IPR006439 HAD hydrolase, subfamily IA YPTS_3940 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_3940 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic YPTS_3940 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_3941 IPR011060 Ribulose-phosphate binding barrel YPTS_3941 IPR026019 Ribulose-phosphate 3-epimerase YPTS_3941 IPR013785 Aldolase-type TIM barrel YPTS_3941 IPR000056 Ribulose-phosphate 3-epimerase-like YPTS_3942 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPTS_3942 IPR012263 Adenine modification methylase, M.EcoRV-type YPTS_3942 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_3942 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_3942 IPR023095 Adenine-specific methyltransferase, domain 2 YPTS_3943 IPR036680 Sporulation-like domain superfamily YPTS_3943 IPR007730 Sporulation-like domain YPTS_3944 IPR030963 3-dehydroquinate synthase family YPTS_3944 IPR016037 3-dehydroquinate synthase AroB YPTS_3944 IPR030960 3-dehydroquinate synthase domain YPTS_3945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3945 IPR031322 Shikimate kinase/gluconokinase YPTS_3945 IPR023000 Shikimate kinase, conserved site YPTS_3945 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPTS_3946 IPR011662 Secretin/TonB, short N-terminal domain YPTS_3946 IPR013355 Type IV pilus secretin PilQ YPTS_3946 IPR001775 GspD/PilQ family YPTS_3946 IPR005644 NolW-like YPTS_3946 IPR038591 NolW-like superfamily YPTS_3946 IPR004845 Type II secretion system GspD, conserved site YPTS_3946 IPR004846 Type II/III secretion system YPTS_3951 IPR001460 Penicillin-binding protein, transpeptidase YPTS_3951 IPR001264 Glycosyl transferase, family 51 YPTS_3951 IPR031376 Penicillin-binding protein, OB-like domain YPTS_3951 IPR036950 Penicillin binding protein transglycosylase domain YPTS_3951 IPR023346 Lysozyme-like domain superfamily YPTS_3951 IPR012338 Beta-lactamase/transpeptidase-like YPTS_3952 IPR015797 NUDIX hydrolase-like domain superfamily YPTS_3952 IPR020084 NUDIX hydrolase, conserved site YPTS_3952 IPR000086 NUDIX hydrolase domain YPTS_3954 IPR010771 Intracellular growth attenuator IgaA YPTS_3955 IPR023214 HAD superfamily YPTS_3955 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_3955 IPR036412 HAD-like superfamily YPTS_3955 IPR006439 HAD hydrolase, subfamily IA YPTS_3956 IPR025708 Heat shock protein 15 YPTS_3956 IPR002942 RNA-binding S4 domain YPTS_3956 IPR036986 RNA-binding S4 domain superfamily YPTS_3957 IPR016153 Heat shock protein Hsp33, N-terminal YPTS_3957 IPR016154 Heat shock protein Hsp33, C-terminal YPTS_3957 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily YPTS_3957 IPR000397 Heat shock protein Hsp33 YPTS_3958 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPTS_3958 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPTS_3958 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPTS_3958 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPTS_3959 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_3959 IPR005467 Histidine kinase domain YPTS_3959 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3959 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_3959 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_3959 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_3959 IPR003660 HAMP domain YPTS_3960 IPR011006 CheY-like superfamily YPTS_3960 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_3960 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3960 IPR039420 Transcriptional regulatory protein WalR-like YPTS_3960 IPR001789 Signal transduction response regulator, receiver domain YPTS_3960 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_3961 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPTS_3961 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPTS_3961 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPTS_3961 IPR028624 Transcription elongation factor GreA/GreB YPTS_3961 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPTS_3961 IPR023459 Transcription elongation factor GreA/GreB family YPTS_3961 IPR006358 Transcription elongation factor GreB YPTS_3961 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPTS_3962 IPR041692 HHH domain 9 YPTS_3962 IPR037027 YqgF/RNase H-like domain superfamily YPTS_3962 IPR032639 Tex protein, YqgF-like domain YPTS_3962 IPR022967 RNA-binding domain, S1 YPTS_3962 IPR012340 Nucleic acid-binding, OB-fold YPTS_3962 IPR012337 Ribonuclease H-like superfamily YPTS_3962 IPR010994 RuvA domain 2-like YPTS_3962 IPR003029 S1 domain YPTS_3962 IPR018974 Tex-like protein, N-terminal YPTS_3962 IPR023319 Tex-like protein, HTH domain superfamily YPTS_3962 IPR023323 Tex-like domain superfamily YPTS_3962 IPR006641 YqgF/RNase H-like domain YPTS_3963 IPR007167 Ferrous iron transporter FeoA domain YPTS_3963 IPR008988 Transcriptional repressor, C-terminal YPTS_3963 IPR038157 Ferrous iron transporter, core domain YPTS_3964 IPR011640 Ferrous iron transport protein B, C-terminal YPTS_3964 IPR041069 FeoB, cytosolic helical domain YPTS_3964 IPR030389 FeoB-type guanine nucleotide-binding (G) domain YPTS_3964 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPTS_3964 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3964 IPR003373 Ferrous iron transport protein B YPTS_3964 IPR005225 Small GTP-binding protein domain YPTS_3965 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YPTS_3965 IPR015102 Transcriptional regulator HTH-type, FeoC YPTS_3965 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3965 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3966 IPR010854 Domain of unknown function DUF1471 YPTS_3966 IPR036275 YdgH-like superfamily YPTS_3966 IPR025543 Dodecin-like YPTS_3967 IPR000073 Alpha/beta hydrolase fold-1 YPTS_3967 IPR029058 Alpha/Beta hydrolase fold YPTS_3967 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase YPTS_3968 IPR029057 Phosphoribosyltransferase-like YPTS_3968 IPR000836 Phosphoribosyltransferase domain YPTS_3968 IPR005222 Competence protein ComF YPTS_3969 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPTS_3969 IPR035903 HesB-like domain superfamily YPTS_3969 IPR034904 Fe-S cluster assembly domain superfamily YPTS_3969 IPR000361 FeS cluster biogenesis YPTS_3969 IPR017726 Fe/S biogenesis protein NfuA YPTS_3970 IPR003385 Glycoside hydrolase, family 77 YPTS_3970 IPR017853 Glycoside hydrolase superfamily YPTS_3971 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPTS_3971 IPR000811 Glycosyl transferase, family 35 YPTS_3971 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPTS_3972 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_3972 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3972 IPR023768 Transcriptional regulator HTH-type, MalT YPTS_3972 IPR000792 Transcription regulator LuxR, C-terminal YPTS_3972 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3972 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_3972 IPR041617 MalT-like TPR region YPTS_3973 IPR001763 Rhodanese-like domain YPTS_3973 IPR023695 Thiosulfate sulfurtransferase, bacterial YPTS_3973 IPR036873 Rhodanese-like domain superfamily YPTS_3974 IPR035952 Rhomboid-like superfamily YPTS_3974 IPR023662 Rhomboid protease GlpG YPTS_3974 IPR038236 GlpG peptidase, N-terminal domain superfamily YPTS_3974 IPR022764 Peptidase S54, rhomboid domain YPTS_3974 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPTS_3975 IPR014036 DeoR C-terminal sensor domain YPTS_3975 IPR001034 DeoR-type HTH domain YPTS_3975 IPR037171 NagB/RpiA transferase-like YPTS_3975 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPTS_3975 IPR036390 Winged helix DNA-binding domain superfamily YPTS_3975 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_3979 IPR006076 FAD dependent oxidoreductase YPTS_3979 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_3979 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPTS_3979 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily YPTS_3979 IPR031656 Alpha-glycerophosphate oxidase, C-terminal YPTS_3980 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPTS_3980 IPR000811 Glycosyl transferase, family 35 YPTS_3980 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPTS_3981 IPR013534 Starch synthase, catalytic domain YPTS_3981 IPR011835 Bacterial/plant glycogen synthase YPTS_3981 IPR001296 Glycosyl transferase, family 1 YPTS_3982 IPR011831 Glucose-1-phosphate adenylyltransferase YPTS_3982 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPTS_3982 IPR005835 Nucleotidyl transferase domain YPTS_3982 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPTS_3982 IPR011004 Trimeric LpxA-like superfamily YPTS_3982 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_3983 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTS_3983 IPR011837 Glycogen debranching enzyme, GlgX type YPTS_3983 IPR040784 Glycogen debranching enzyme, C-terminal domain YPTS_3983 IPR004193 Glycoside hydrolase, family 13, N-terminal YPTS_3983 IPR022844 Glycogen debranching enzyme, bacterial YPTS_3983 IPR014756 Immunoglobulin E-set YPTS_3983 IPR013783 Immunoglobulin-like fold YPTS_3983 IPR017853 Glycoside hydrolase superfamily YPTS_3983 IPR013780 Glycosyl hydrolase, all-beta YPTS_3984 IPR037439 1,4-alpha-glucan-branching enzyme YPTS_3984 IPR014756 Immunoglobulin E-set YPTS_3984 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta YPTS_3984 IPR004193 Glycoside hydrolase, family 13, N-terminal YPTS_3984 IPR013780 Glycosyl hydrolase, all-beta YPTS_3984 IPR017853 Glycoside hydrolase superfamily YPTS_3984 IPR013783 Immunoglobulin-like fold YPTS_3984 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPTS_3984 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTS_3985 IPR010559 Signal transduction histidine kinase, internal region YPTS_3985 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPTS_3985 IPR003018 GAF domain YPTS_3985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_3986 IPR024519 Inverse autotransporter, beta-domain YPTS_3986 IPR038177 Inverse autotransporter, beta-domain superfamily YPTS_3986 IPR016186 C-type lectin-like/link domain superfamily YPTS_3986 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPTS_3986 IPR016187 C-type lectin fold YPTS_3986 IPR013117 Intimin, C-terminal YPTS_3986 IPR008964 Invasin/intimin cell-adhesion fragments YPTS_3986 IPR015217 Invasin, domain 3 YPTS_3986 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPTS_3986 IPR013783 Immunoglobulin-like fold YPTS_3990 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPTS_3990 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPTS_3990 IPR036291 NAD(P)-binding domain superfamily YPTS_3990 IPR012080 Aspartate-semialdehyde dehydrogenase YPTS_3990 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPTS_3990 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPTS_3991 IPR002771 Multiple antibiotic resistance (MarC)-related YPTS_3994 IPR008514 Type VI secretion system effector, Hcp YPTS_3994 IPR003615 HNH nuclease YPTS_3994 IPR036624 Hcp1-like superfamily YPTS_3995 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPTS_3995 IPR031322 Shikimate kinase/gluconokinase YPTS_3995 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_3996 IPR003474 Gluconate transporter YPTS_3997 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPTS_3997 IPR028082 Periplasmic binding protein-like I YPTS_3997 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPTS_3997 IPR000843 LacI-type HTH domain YPTS_3998 IPR011051 RmlC-like cupin domain superfamily YPTS_3998 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPTS_3998 IPR003829 Pirin, N-terminal domain YPTS_3998 IPR012093 Pirin YPTS_3998 IPR014710 RmlC-like jelly roll fold YPTS_4000 IPR011006 CheY-like superfamily YPTS_4000 IPR001867 OmpR/PhoB-type DNA-binding domain YPTS_4000 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_4000 IPR001789 Signal transduction response regulator, receiver domain YPTS_4000 IPR039420 Transcriptional regulatory protein WalR-like YPTS_4000 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_4002 IPR013785 Aldolase-type TIM barrel YPTS_4002 IPR000771 Fructose-bisphosphate aldolase, class-II YPTS_4002 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 YPTS_4004 IPR025997 Periplasmic binding protein YPTS_4004 IPR028082 Periplasmic binding protein-like I YPTS_4005 IPR001851 ABC transporter, permease YPTS_4006 IPR003439 ABC transporter-like YPTS_4006 IPR015861 ABC transporter, ribose import, RbsA YPTS_4006 IPR003593 AAA+ ATPase domain YPTS_4006 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4006 IPR017871 ABC transporter, conserved site YPTS_4007 IPR013656 PAS fold-4 YPTS_4007 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_4007 IPR011006 CheY-like superfamily YPTS_4007 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_4007 IPR035965 PAS domain superfamily YPTS_4007 IPR005467 Histidine kinase domain YPTS_4007 IPR001789 Signal transduction response regulator, receiver domain YPTS_4007 IPR000014 PAS domain YPTS_4007 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPTS_4007 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPTS_4007 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPTS_4009 IPR026866 Protein CR006, P-loop domain YPTS_4009 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4021 IPR012337 Ribonuclease H-like superfamily YPTS_4021 IPR001584 Integrase, catalytic core YPTS_4021 IPR036397 Ribonuclease H superfamily YPTS_4022 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_4022 IPR014832 TnsA endonuclease C-terminal YPTS_4022 IPR014833 TnsA endonuclease, N-terminal YPTS_4022 IPR011335 Restriction endonuclease type II-like YPTS_4022 IPR011856 tRNA endonuclease-like domain superfamily YPTS_4022 IPR036390 Winged helix DNA-binding domain superfamily YPTS_4023 IPR023166 HI0933-like insert domain superfamily YPTS_4023 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_4023 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like YPTS_4024 IPR001204 Phosphate transporter YPTS_4025 IPR019598 Universal stress protein B YPTS_4026 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPTS_4026 IPR006015 Universal stress protein A family YPTS_4026 IPR006016 UspA YPTS_4027 IPR033922 NAD(P) binding domain of glutamate dehydrogenase YPTS_4027 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPTS_4027 IPR036291 NAD(P)-binding domain superfamily YPTS_4027 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPTS_4027 IPR014362 Glutamate dehydrogenase YPTS_4027 IPR033524 Leu/Phe/Val dehydrogenases active site YPTS_4027 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPTS_4028 IPR001343 RTX calcium-binding nonapeptide repeat YPTS_4028 IPR001818 Peptidase M10, metallopeptidase YPTS_4028 IPR018511 Hemolysin-type calcium-binding conserved site YPTS_4028 IPR016294 Peptidase M10B YPTS_4028 IPR013858 Peptidase M10 serralysin, C-terminal YPTS_4028 IPR006026 Peptidase, metallopeptidase YPTS_4028 IPR034033 Serralysin-like metallopeptidase domain YPTS_4028 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_4028 IPR024079 Metallopeptidase, catalytic domain superfamily YPTS_4029 IPR007536 Ribosomal RNA small subunit methyltransferase J YPTS_4029 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_4030 IPR001567 Peptidase M3A/M3B catalytic domain YPTS_4030 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPTS_4031 IPR007473 Ribosomal RNA large subunit methyltransferase J YPTS_4031 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_4031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_4032 IPR006322 Glutathione reductase, eukaryote/bacterial YPTS_4032 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPTS_4032 IPR023753 FAD/NAD(P)-binding domain YPTS_4032 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_4032 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPTS_4032 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPTS_4032 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPTS_4033 IPR042070 PucR C-terminal helix-turn-helix domain superfamily YPTS_4033 IPR025736 PucR C-terminal helix-turn-helix domain YPTS_4033 IPR008599 Putative sugar diacid recognition YPTS_4033 IPR041522 CdaR, GGDEF-like domain YPTS_4034 IPR003474 Gluconate transporter YPTS_4035 IPR004381 Glycerate kinase YPTS_4035 IPR018193 Glycerate kinase, flavodoxin-like fold YPTS_4035 IPR018197 Glycerate kinase, restriction-enzyme-like fold YPTS_4035 IPR036129 Glycerate kinase superfamily YPTS_4040 IPR005274 Inner membrane protein YhjD YPTS_4040 IPR017039 Virulence factor BrkB YPTS_4041 IPR003763 CDP-diacylglycerol pyrophosphatase YPTS_4041 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily YPTS_4041 IPR036265 HIT-like superfamily YPTS_4042 IPR007844 AsmA YPTS_4043 IPR001633 EAL domain YPTS_4043 IPR035919 EAL domain superfamily YPTS_4044 IPR014347 Tautomerase/MIF superfamily YPTS_4044 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPTS_4044 IPR004370 4-oxalocrotonate tautomerase YPTS_4045 IPR029056 Ribokinase-like YPTS_4045 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_4045 IPR011611 Carbohydrate kinase PfkB YPTS_4046 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPTS_4046 IPR007863 Peptidase M16, C-terminal YPTS_4046 IPR011765 Peptidase M16, N-terminal YPTS_4048 IPR018107 Sodium:dicarboxylate symporter, conserved site YPTS_4048 IPR036458 Sodium:dicarboxylate symporter superfamily YPTS_4048 IPR001991 Sodium:dicarboxylate symporter YPTS_4048 IPR023954 C4-dicarboxylate transport protein YPTS_4050 IPR010702 Periplasmic pectate lyase YPTS_4051 IPR009331 Oligogalacturonate-specific porin YPTS_4052 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPTS_4052 IPR000160 GGDEF domain YPTS_4052 IPR003660 HAMP domain YPTS_4052 IPR035919 EAL domain superfamily YPTS_4052 IPR001633 EAL domain YPTS_4052 IPR029787 Nucleotide cyclase YPTS_4053 IPR012341 Six-hairpin glycosidase-like superfamily YPTS_4053 IPR002037 Glycoside hydrolase, family 8 YPTS_4053 IPR019834 Glycoside hydrolase, family 8, conserved site YPTS_4053 IPR008928 Six-hairpin glycosidase superfamily YPTS_4054 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4054 IPR003593 AAA+ ATPase domain YPTS_4054 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_4054 IPR017871 ABC transporter, conserved site YPTS_4054 IPR003439 ABC transporter-like YPTS_4055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4055 IPR003439 ABC transporter-like YPTS_4055 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPTS_4055 IPR003593 AAA+ ATPase domain YPTS_4055 IPR017871 ABC transporter, conserved site YPTS_4056 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4056 IPR035906 MetI-like superfamily YPTS_4056 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPTS_4057 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4057 IPR035906 MetI-like superfamily YPTS_4058 IPR039424 Solute-binding protein family 5 YPTS_4058 IPR023765 Solute-binding protein family 5, conserved site YPTS_4058 IPR030678 Peptide/nickel binding protein, MppA-type YPTS_4058 IPR000914 Solute-binding protein family 5 domain YPTS_4060 IPR027282 Two partner secretion pathway transporter YPTS_4060 IPR013686 Polypeptide-transport-associated, ShlB-type YPTS_4060 IPR035251 ShlB, POTRA domain YPTS_4060 IPR005565 Haemolysin activator HlyB, C-terminal YPTS_4060 IPR034746 POTRA domain YPTS_4061 IPR006914 VENN motif-containing domain YPTS_4061 IPR025157 Hemagglutinin repeat YPTS_4061 IPR011050 Pectin lyase fold/virulence factor YPTS_4061 IPR012334 Pectin lyase fold YPTS_4061 IPR008638 Filamentous haemagglutinin, N-terminal YPTS_4061 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPTS_4061 IPR008619 Filamentous haemagglutinin repeat YPTS_4061 IPR006626 Parallel beta-helix repeat YPTS_4063 IPR000849 Sugar phosphate transporter YPTS_4063 IPR021159 Glycerate/sugar phosphate transporter, conserved site YPTS_4063 IPR011701 Major facilitator superfamily YPTS_4063 IPR020846 Major facilitator superfamily domain YPTS_4063 IPR036259 MFS transporter superfamily YPTS_4064 IPR007895 MASE1 YPTS_4064 IPR003594 Histidine kinase/HSP90-like ATPase YPTS_4064 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPTS_4064 IPR005467 Histidine kinase domain YPTS_4064 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPTS_4065 IPR000792 Transcription regulator LuxR, C-terminal YPTS_4065 IPR016032 Signal transduction response regulator, C-terminal effector YPTS_4065 IPR011006 CheY-like superfamily YPTS_4065 IPR001789 Signal transduction response regulator, receiver domain YPTS_4066 IPR000917 Sulfatase, N-terminal YPTS_4066 IPR012549 Phosphoethanolamine transferase, N-terminal YPTS_4066 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPTS_4066 IPR040423 Phosphoethanolamine transferase YPTS_4067 IPR012354 Esterase/lipase YPTS_4067 IPR022742 Serine aminopeptidase, S33 YPTS_4067 IPR029058 Alpha/Beta hydrolase fold YPTS_4068 IPR004841 Amino acid permease/ SLC12A domain YPTS_4068 IPR004840 Amino acid permease, conserved site YPTS_4069 IPR001106 Aromatic amino acid lyase YPTS_4069 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPTS_4069 IPR008948 L-Aspartase-like YPTS_4069 IPR005921 Histidine ammonia-lyase YPTS_4069 IPR024083 Fumarase/histidase, N-terminal YPTS_4070 IPR023636 Urocanase conserved site YPTS_4070 IPR036190 Urocanase superfamily YPTS_4070 IPR035400 Urocanase, N-terminal domain YPTS_4070 IPR035085 Urocanase, Rossmann-like domain YPTS_4070 IPR035401 Urocanase, C-terminal domain YPTS_4070 IPR038364 Urocanase, central domain superfamily YPTS_4070 IPR023637 Urocanase YPTS_4071 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_4071 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_4071 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPTS_4071 IPR005856 Cysteine synthase YPTS_4071 IPR005858 Cysteine synthase CysM YPTS_4072 IPR000836 Phosphoribosyltransferase domain YPTS_4072 IPR029057 Phosphoribosyltransferase-like YPTS_4072 IPR005764 Adenine phosphoribosyl transferase YPTS_4074 IPR011761 ATP-grasp fold YPTS_4075 IPR033870 FatB domain YPTS_4075 IPR002491 ABC transporter periplasmic binding domain YPTS_4076 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_4076 IPR037294 ABC transporter, BtuC-like YPTS_4077 IPR037294 ABC transporter, BtuC-like YPTS_4077 IPR000522 ABC transporter, permease protein, BtuC-like YPTS_4078 IPR003439 ABC transporter-like YPTS_4078 IPR017871 ABC transporter, conserved site YPTS_4078 IPR003593 AAA+ ATPase domain YPTS_4078 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4084 IPR009610 CbtA toxin of type IV toxin-antitoxin system YPTS_4085 IPR009320 Antitoxin CbeA YPTS_4085 IPR038025 Antitoxin CbeA superfamily YPTS_4086 IPR025657 RadC-like JAB domain YPTS_4086 IPR020891 Uncharacterised protein family UPF0758, conserved site YPTS_4086 IPR037518 MPN domain YPTS_4086 IPR001405 Uncharacterised protein family UPF0758 YPTS_4089 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4090 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4090 IPR002611 IstB-like ATP-binding protein YPTS_4090 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_4090 IPR001270 ClpA/B family YPTS_4090 IPR003593 AAA+ ATPase domain YPTS_4092 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_4092 IPR002611 IstB-like ATP-binding protein YPTS_4092 IPR003593 AAA+ ATPase domain YPTS_4092 IPR001270 ClpA/B family YPTS_4092 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4093 IPR017894 HTH domain, IS21 transposase-type YPTS_4093 IPR036397 Ribonuclease H superfamily YPTS_4093 IPR001584 Integrase, catalytic core YPTS_4093 IPR012337 Ribonuclease H-like superfamily YPTS_4093 IPR006120 Resolvase, HTH domain YPTS_4095 IPR011335 Restriction endonuclease type II-like YPTS_4095 IPR007560 Restriction endonuclease type IV, Mrr YPTS_4095 IPR025745 Restriction system protein Mrr-like N-terminal domain YPTS_4097 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal YPTS_4097 IPR004473 Restriction endonuclease, type I, HsdR YPTS_4097 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4097 IPR040980 SWI2/SNF2 ATPase YPTS_4097 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPTS_4097 IPR021810 Protein of unknown function DUF3387 YPTS_4099 IPR000055 Restriction endonuclease, type I, HsdS YPTS_4100 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily YPTS_4100 IPR003356 DNA methylase, adenine-specific YPTS_4100 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPTS_4100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_4100 IPR004546 Restriction endonuclease, type I, HsdM YPTS_4100 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain YPTS_4103 IPR004107 Integrase, SAM-like, N-terminal YPTS_4103 IPR010998 Integrase/recombinase, N-terminal YPTS_4103 IPR025166 Integrase, DNA-binding domain YPTS_4103 IPR038488 Integrase, DNA-binding domain superfamily YPTS_4103 IPR002104 Integrase, catalytic domain YPTS_4103 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPTS_4103 IPR013762 Integrase-like, catalytic domain superfamily YPTS_4104 IPR020449 Transcription regulator HTH, AraC- type YPTS_4104 IPR009057 Homeobox-like domain superfamily YPTS_4104 IPR018060 DNA binding HTH domain, AraC-type YPTS_4104 IPR018062 HTH domain AraC-type, conserved site YPTS_4104 IPR028082 Periplasmic binding protein-like I YPTS_4105 IPR001851 ABC transporter, permease YPTS_4106 IPR017871 ABC transporter, conserved site YPTS_4106 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4106 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPTS_4106 IPR003439 ABC transporter-like YPTS_4106 IPR003593 AAA+ ATPase domain YPTS_4107 IPR028082 Periplasmic binding protein-like I YPTS_4107 IPR025997 Periplasmic binding protein YPTS_4107 IPR013456 D-xylose ABC transporter, substrate-binding protein YPTS_4108 IPR013452 Xylose isomerase, bacterial-type YPTS_4108 IPR036237 Xylose isomerase-like superfamily YPTS_4108 IPR001998 Xylose isomerase YPTS_4109 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPTS_4109 IPR000577 Carbohydrate kinase, FGGY YPTS_4109 IPR018483 Carbohydrate kinase, FGGY, conserved site YPTS_4109 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPTS_4109 IPR006000 Xylulokinase YPTS_4111 IPR016148 Pili assembly chaperone, C-terminal YPTS_4111 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPTS_4111 IPR008962 PapD-like superfamily YPTS_4111 IPR016147 Pili assembly chaperone, N-terminal YPTS_4111 IPR013783 Immunoglobulin-like fold YPTS_4111 IPR018046 Pili assembly chaperone, conserved site YPTS_4111 IPR001829 Pili assembly chaperone, bacterial YPTS_4112 IPR000015 Outer membrane usher protein YPTS_4112 IPR037224 PapC, N-terminal domain superfamily YPTS_4112 IPR018030 Fimbrial membrane usher, conserved site YPTS_4112 IPR042186 Outer membrane usher protein FimD, plug domain YPTS_4112 IPR025949 PapC-like, C-terminal domain YPTS_4112 IPR025885 PapC, N-terminal domain YPTS_4113 IPR008966 Adhesion domain superfamily YPTS_4113 IPR000259 Fimbrial-type adhesion domain YPTS_4113 IPR036937 Fimbrial-type adhesion domain superfamily YPTS_4114 IPR002656 Acyltransferase 3 YPTS_4114 IPR032905 O-acetyltransferase WecH YPTS_4116 IPR012337 Ribonuclease H-like superfamily YPTS_4116 IPR036397 Ribonuclease H superfamily YPTS_4116 IPR001584 Integrase, catalytic core YPTS_4116 IPR025948 HTH-like domain YPTS_4116 IPR038965 Transposase InsF-like YPTS_4117 IPR036291 NAD(P)-binding domain superfamily YPTS_4117 IPR023401 Ornithine cyclodeaminase, N-terminal YPTS_4117 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPTS_4117 IPR014334 Ectoine utilization protein EutC YPTS_4118 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPTS_4118 IPR005789 Threonine dehydratase, catabolic YPTS_4118 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPTS_4118 IPR001926 Pyridoxal-phosphate dependent enzyme YPTS_4118 IPR002912 ACT domain YPTS_4119 IPR011659 WD40-like Beta Propeller YPTS_4119 IPR011042 Six-bladed beta-propeller, TolB-like YPTS_4119 IPR022223 Protein of unknown function DUF3748 YPTS_4120 IPR010780 Protein of unknown function DUF1375 YPTS_4121 IPR002068 Alpha crystallin/Hsp20 domain YPTS_4121 IPR023728 Small heat shock protein IbpA YPTS_4121 IPR008978 HSP20-like chaperone YPTS_4121 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPTS_4122 IPR022848 Small heat shock protein IbpB YPTS_4122 IPR008978 HSP20-like chaperone YPTS_4122 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPTS_4122 IPR002068 Alpha crystallin/Hsp20 domain YPTS_4123 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPTS_4123 IPR006512 YidE/YbjL duplication YPTS_4123 IPR023018 Transport protein YidE, putative YPTS_4123 IPR006037 Regulator of K+ conductance, C-terminal YPTS_4124 IPR004839 Aminotransferase, class I/classII YPTS_4124 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_4124 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_4126 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPTS_4126 IPR017853 Glycoside hydrolase superfamily YPTS_4126 IPR014635 Alpha-amylase, MalS type YPTS_4127 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPTS_4127 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPTS_4127 IPR036291 NAD(P)-binding domain superfamily YPTS_4127 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPTS_4127 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPTS_4127 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPTS_4129 IPR006690 Outer membrane protein, OmpA-like, conserved site YPTS_4129 IPR036737 OmpA-like domain superfamily YPTS_4129 IPR006664 Outer membrane protein, bacterial YPTS_4129 IPR039567 Glycine zipper domain YPTS_4129 IPR006665 OmpA-like domain YPTS_4132 IPR005019 Methyladenine glycosylase YPTS_4132 IPR004597 DNA-3-methyladenine glycosylase I YPTS_4132 IPR011257 DNA glycosylase YPTS_4133 IPR006194 Glycine-tRNA synthetase, heterodimeric YPTS_4133 IPR002310 Glycine-tRNA ligase, alpha subunit YPTS_4134 IPR006194 Glycine-tRNA synthetase, heterodimeric YPTS_4134 IPR008909 DALR anticodon binding YPTS_4134 IPR015944 Glycine-tRNA ligase, beta subunit YPTS_4136 IPR021413 Protein of unknown function DUF3053 YPTS_4138 IPR036095 PTS system IIB component-like superfamily YPTS_4138 IPR013011 Phosphotransferase system, EIIB component, type 2 YPTS_4138 IPR002178 PTS EIIA type-2 domain YPTS_4138 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YPTS_4138 IPR003352 Phosphotransferase system, EIIC YPTS_4138 IPR013014 Phosphotransferase system, EIIC component, type 2 YPTS_4138 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPTS_4138 IPR016152 Phosphotransferase/anion transporter YPTS_4138 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPTS_4139 IPR000669 Mannitol dehydrogenase YPTS_4139 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPTS_4139 IPR013131 Mannitol dehydrogenase, N-terminal YPTS_4139 IPR023027 Mannitol dehydrogenase, conserved site YPTS_4139 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPTS_4139 IPR036291 NAD(P)-binding domain superfamily YPTS_4139 IPR013118 Mannitol dehydrogenase, C-terminal YPTS_4139 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPTS_4140 IPR038026 MtlR-like superfamily YPTS_4140 IPR007761 Mannitol repressor MtlR-like YPTS_4142 IPR021230 Protein of unknown function DUF2810 YPTS_4146 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPTS_4146 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPTS_4146 IPR004090 Chemotaxis methyl-accepting receptor YPTS_4146 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPTS_4146 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPTS_4146 IPR003660 HAMP domain YPTS_4147 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPTS_4147 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPTS_4147 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPTS_4147 IPR019833 Manganese/iron superoxide dismutase, binding site YPTS_4147 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPTS_4147 IPR001189 Manganese/iron superoxide dismutase YPTS_4148 IPR016193 Cytidine deaminase-like YPTS_4148 IPR003786 Sulfur carrier protein FdhD YPTS_4149 IPR006656 Molybdopterin oxidoreductase YPTS_4149 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_4149 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTS_4149 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_4149 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_4149 IPR006443 Formate dehydrogenase-N, alpha subunit YPTS_4149 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_4149 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_4150 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPTS_4150 IPR006443 Formate dehydrogenase-N, alpha subunit YPTS_4150 IPR009010 Aspartate decarboxylase-like domain superfamily YPTS_4150 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPTS_4150 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPTS_4150 IPR006657 Molybdopterin dinucleotide-binding domain YPTS_4150 IPR006311 Twin-arginine translocation pathway, signal sequence YPTS_4150 IPR006656 Molybdopterin oxidoreductase YPTS_4151 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPTS_4151 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria YPTS_4151 IPR038384 Formate dehydrogenase, C-terminal domain superfamily YPTS_4151 IPR014603 Formate dehydrogenase iron-sulphur subunit YPTS_4151 IPR015246 Formate dehydrogenase, transmembrane YPTS_4151 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPTS_4152 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPTS_4152 IPR016174 Di-haem cytochrome, transmembrane YPTS_4152 IPR006471 Formate dehydrogenase, gamma subunit YPTS_4153 IPR006452 Formate dehydrogenase accessory protein YPTS_4153 IPR024064 FdhE-like superfamily YPTS_4154 IPR015424 Pyridoxal phosphate-dependent transferase YPTS_4154 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPTS_4154 IPR004534 L-seryl-tRNA(Sec) selenium transferase YPTS_4154 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPTS_4154 IPR018319 L-seryl-tRNA selenium transferase-like YPTS_4155 IPR004535 Translation elongation factor, selenocysteine-specific YPTS_4155 IPR036390 Winged helix DNA-binding domain superfamily YPTS_4155 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_4155 IPR015191 Translation elongation factor SelB, winged helix, type 3 YPTS_4155 IPR004161 Translation elongation factor EFTu-like, domain 2 YPTS_4155 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPTS_4155 IPR015190 Translation elongation factor SelB, winged helix, type 2 YPTS_4155 IPR009000 Translation protein, beta-barrel domain superfamily YPTS_4155 IPR031157 Tr-type G domain, conserved site YPTS_4155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4155 IPR000795 Transcription factor, GTP-binding domain YPTS_4160 IPR036390 Winged helix DNA-binding domain superfamily YPTS_4160 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_4160 IPR000524 Transcription regulator HTH, GntR YPTS_4160 IPR008920 Transcription regulator FadR/GntR, C-terminal YPTS_4160 IPR011711 GntR, C-terminal YPTS_4161 IPR036259 MFS transporter superfamily YPTS_4161 IPR020846 Major facilitator superfamily domain YPTS_4161 IPR011701 Major facilitator superfamily YPTS_4161 IPR004638 Drug resistance transporter EmrB-like YPTS_4163 IPR011877 Ribokinase YPTS_4163 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPTS_4163 IPR002139 Ribokinase/fructokinase YPTS_4163 IPR011611 Carbohydrate kinase PfkB YPTS_4163 IPR029056 Ribokinase-like YPTS_4164 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPTS_4164 IPR023064 D-ribose pyranase YPTS_4164 IPR023750 RbsD-like superfamily YPTS_4165 IPR023051 Potassium uptake protein, low affinity, Kup YPTS_4165 IPR003855 Potassium transporter YPTS_4166 IPR041538 ATPase RavA-like, AAA lid domain YPTS_4166 IPR003593 AAA+ ATPase domain YPTS_4166 IPR011704 ATPase, dynein-related, AAA domain YPTS_4166 IPR023671 ATPase RavA YPTS_4166 IPR022547 ATPase, RavA, C-terminal YPTS_4166 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4167 IPR002035 von Willebrand factor, type A YPTS_4167 IPR036465 von Willebrand factor A-like domain superfamily YPTS_4167 IPR023481 Uncharacterised protein family ViaA YPTS_4167 IPR008912 Uncharacterised protein family CoxE-like YPTS_4168 IPR006195 Aminoacyl-tRNA synthetase, class II YPTS_4168 IPR004618 Aspartate--ammonia ligase YPTS_4169 IPR036390 Winged helix DNA-binding domain superfamily YPTS_4169 IPR011008 Dimeric alpha-beta barrel YPTS_4169 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPTS_4169 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPTS_4169 IPR036388 Winged helix-like DNA-binding domain superfamily YPTS_4169 IPR000485 AsnC-type HTH domain YPTS_4169 IPR019888 Transcription regulator AsnC-type YPTS_4169 IPR011991 ArsR-like helix-turn-helix domain YPTS_4170 IPR029039 Flavoprotein-like superfamily YPTS_4170 IPR008254 Flavodoxin/nitric oxide synthase YPTS_4171 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related YPTS_4171 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG YPTS_4171 IPR026904 GidA associated domain 3 YPTS_4171 IPR036188 FAD/NAD(P)-binding domain superfamily YPTS_4171 IPR020595 MnmG-related, conserved site YPTS_4172 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPTS_4172 IPR003682 rRNA small subunit methyltransferase G YPTS_4173 IPR005598 ATP synthase protein I YPTS_4174 IPR023011 ATP synthase, F0 complex, subunit A, active site YPTS_4174 IPR000568 ATP synthase, F0 complex, subunit A YPTS_4174 IPR035908 ATP synthase, F0 complex, subunit A superfamily YPTS_4175 IPR000454 ATP synthase, F0 complex, subunit C YPTS_4175 IPR002379 V-ATPase proteolipid subunit C-like domain YPTS_4175 IPR038662 F1F0 ATP synthase subunit C superfamily YPTS_4175 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast YPTS_4175 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site YPTS_4175 IPR035921 F/V-ATP synthase subunit C superfamily YPTS_4176 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily YPTS_4176 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast YPTS_4176 IPR005864 ATP synthase, F0 complex, subunit b, bacterial YPTS_4177 IPR020781 ATPase, OSCP/delta subunit, conserved site YPTS_4177 IPR000711 ATPase, OSCP/delta subunit YPTS_4177 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily YPTS_4178 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPTS_4178 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPTS_4178 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTS_4178 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPTS_4178 IPR005294 ATP synthase, F1 complex, alpha subunit YPTS_4178 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily YPTS_4178 IPR000793 ATP synthase, alpha subunit, C-terminal YPTS_4178 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain YPTS_4178 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4178 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_4179 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site YPTS_4179 IPR000131 ATP synthase, F1 complex, gamma subunit YPTS_4179 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily YPTS_4180 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPTS_4180 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal YPTS_4180 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPTS_4180 IPR005722 ATP synthase, F1 complex, beta subunit YPTS_4180 IPR003593 AAA+ ATPase domain YPTS_4180 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_4180 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTS_4180 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4181 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPTS_4181 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal YPTS_4181 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal YPTS_4181 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily YPTS_4181 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit YPTS_4182 IPR001451 Hexapeptide repeat YPTS_4182 IPR011004 Trimeric LpxA-like superfamily YPTS_4182 IPR029044 Nucleotide-diphospho-sugar transferases YPTS_4182 IPR025877 MobA-like NTP transferase YPTS_4182 IPR038009 GlmU, C-terminal LbH domain YPTS_4182 IPR018357 Hexapeptide transferase, conserved site YPTS_4182 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPTS_4184 IPR035490 GlmS/FrlB, SIS domain 2 YPTS_4184 IPR001347 Sugar isomerase (SIS) YPTS_4184 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPTS_4184 IPR017932 Glutamine amidotransferase type 2 domain YPTS_4184 IPR035466 GlmS/AgaS, SIS domain 1 YPTS_4184 IPR029055 Nucleophile aminohydrolases, N-terminal YPTS_4186 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS YPTS_4186 IPR024370 PBP domain YPTS_4187 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4187 IPR035906 MetI-like superfamily YPTS_4187 IPR011864 Phosphate ABC transporter, permease protein PstC YPTS_4188 IPR035906 MetI-like superfamily YPTS_4188 IPR005672 Phosphate transport system permease protein PstA YPTS_4188 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4189 IPR003593 AAA+ ATPase domain YPTS_4189 IPR003439 ABC transporter-like YPTS_4189 IPR017871 ABC transporter, conserved site YPTS_4189 IPR015850 ABC transporter, phosphate import, PstB YPTS_4189 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4189 IPR005670 Phosphate transport system permease protein 1 YPTS_4190 IPR026022 PhoU domain YPTS_4190 IPR038078 PhoU-like domain superfamily YPTS_4190 IPR028366 Phosphate transport system protein PhoU YPTS_4192 IPR018313 Solute-binding protein family 3, conserved site YPTS_4192 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPTS_4192 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPTS_4192 IPR001320 Ionotropic glutamate receptor YPTS_4193 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_4193 IPR035906 MetI-like superfamily YPTS_4193 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4194 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPTS_4194 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPTS_4194 IPR035906 MetI-like superfamily YPTS_4195 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPTS_4195 IPR023214 HAD superfamily YPTS_4195 IPR041492 Haloacid dehalogenase-like hydrolase YPTS_4195 IPR006439 HAD hydrolase, subfamily IA YPTS_4195 IPR036412 HAD-like superfamily YPTS_4196 IPR006043 Xanthine/uracil/vitamin C permease YPTS_4196 IPR026033 Azaguanine-like transporters YPTS_4200 IPR024906 Enoyl reductase FAD binding domain YPTS_4200 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPTS_4200 IPR010758 Trans-2-enoyl-CoA reductase YPTS_4201 IPR027368 tRNA modification GTPase MnmE domain 2 YPTS_4201 IPR031168 TrmE-type guanine nucleotide-binding domain YPTS_4201 IPR018948 GTP-binding protein TrmE, N-terminal YPTS_4201 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPTS_4201 IPR005225 Small GTP-binding protein domain YPTS_4201 IPR006073 GTP binding domain YPTS_4201 IPR004520 tRNA modification GTPase MnmE YPTS_4201 IPR025867 MnmE, helical domain YPTS_4201 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4202 IPR019998 Membrane insertase YidC YPTS_4202 IPR028053 Membrane insertase YidC, N-terminal YPTS_4202 IPR038210 Membrane insertase YidC, periplasmic domain YPTS_4202 IPR038221 YidC, periplasmic domain superfamily YPTS_4202 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPTS_4202 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 YPTS_4203 IPR002696 Putative membrane protein insertion efficiency factor YPTS_4204 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPTS_4204 IPR020539 Ribonuclease P, conserved site YPTS_4204 IPR000100 Ribonuclease P YPTS_4204 IPR020568 Ribosomal protein S5 domain 2-type fold YPTS_4205 IPR020939 Ribosomal protein L34, conserved site YPTS_4205 IPR000271 Ribosomal protein L34 YPTS_4207 IPR013353 Type III secretion system chaperone YscB YPTS_4207 IPR010261 Tir chaperone protein (CesT) family YPTS_4209 IPR000253 Forkhead-associated (FHA) domain YPTS_4209 IPR012843 Type III secretion system YscD/HrpQ YPTS_4209 IPR008984 SMAD/FHA domain superfamily YPTS_4209 IPR032030 YscD, cytoplasmic domain YPTS_4209 IPR032034 Yop protein translocation protein D, periplasmic domain YPTS_4210 IPR012671 Type III secretion system, secretion protein E YPTS_4211 IPR011841 Type III secretion system, needle protein YPTS_4211 IPR021123 Type III secretion, needle-protein-like YPTS_4211 IPR037203 Type III secretion, needle-protein-like superfamily YPTS_4212 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_4212 IPR013348 Type III secretion system YscG YPTS_4213 IPR013349 Type III secretion system effector YopR YPTS_4213 IPR041814 Type III secretion system virulence factor YopR, core domain YPTS_4214 IPR012670 Type III secretion system, YscI/HrpB YPTS_4215 IPR006182 Secretory protein YscJ/FliF YPTS_4215 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPTS_4216 IPR009510 Type III secretion system, secretion protein K YPTS_4217 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPTS_4217 IPR012842 Type III secretion system HrpE/YscL YPTS_4218 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal YPTS_4218 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily YPTS_4219 IPR009057 Homeobox-like domain superfamily YPTS_4219 IPR002514 Transposase IS3/IS911family YPTS_4221 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily YPTS_4221 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal YPTS_4221 IPR000387 Tyrosine specific protein phosphatases domain YPTS_4221 IPR029021 Protein-tyrosine phosphatase-like YPTS_4221 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH YPTS_4221 IPR003595 Protein-tyrosine phosphatase, catalytic YPTS_4221 IPR016130 Protein-tyrosine phosphatase, active site YPTS_4221 IPR000242 PTP type protein phosphatase YPTS_4222 IPR025948 HTH-like domain YPTS_4222 IPR001584 Integrase, catalytic core YPTS_4222 IPR036397 Ribonuclease H superfamily YPTS_4222 IPR012337 Ribonuclease H-like superfamily YPTS_4224 IPR000719 Protein kinase domain YPTS_4224 IPR003547 Serine/threonine protein kinase, yersinia-type YPTS_4224 IPR008271 Serine/threonine-protein kinase, active site YPTS_4224 IPR011009 Protein kinase-like domain superfamily YPTS_4224 IPR019093 Rac1-binding domain YPTS_4227 IPR012337 Ribonuclease H-like superfamily YPTS_4230 IPR017837 Plasmid replication initiator, RepA, IncFII type YPTS_4230 IPR003446 Plasmid replication initiation, RepA YPTS_4231 IPR019661 Replication regulatory protein RepA2 YPTS_4234 IPR036397 Ribonuclease H superfamily YPTS_4234 IPR038965 Transposase InsF-like YPTS_4234 IPR001584 Integrase, catalytic core YPTS_4234 IPR012337 Ribonuclease H-like superfamily YPTS_4236 IPR014862 TrwC relaxase YPTS_4236 IPR040987 TraI, N-terminal subdomain YPTS_4236 IPR009767 DNA helicase, TraI type YPTS_4236 IPR014129 Conjugative transfer relaxase protein TraI YPTS_4236 IPR014059 Conjugative relaxase, N-terminal YPTS_4236 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4236 IPR040668 TraI, 2B/2B-like domain YPTS_4238 IPR005594 YadA-like, C-terminal YPTS_4238 IPR011049 Serralysin-like metalloprotease, C-terminal YPTS_4238 IPR008126 Outer membrane adhesion, Yersinia YPTS_4238 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPTS_4238 IPR008640 Head domain of trimeric autotransporter adhesin YPTS_4240 IPR002513 Tn3 transposase DDE domain YPTS_4240 IPR025296 Domain of unknown function DUF4158 YPTS_4241 IPR006120 Resolvase, HTH domain YPTS_4241 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily YPTS_4241 IPR006119 Resolvase, N-terminal catalytic domain YPTS_4241 IPR009057 Homeobox-like domain superfamily YPTS_4241 IPR006118 Recombinase, conserved site YPTS_4244 IPR009057 Homeobox-like domain superfamily YPTS_4244 IPR002514 Transposase IS3/IS911family YPTS_4245 IPR001584 Integrase, catalytic core YPTS_4245 IPR012337 Ribonuclease H-like superfamily YPTS_4245 IPR036397 Ribonuclease H superfamily YPTS_4245 IPR025948 HTH-like domain YPTS_4247 IPR001270 ClpA/B family YPTS_4247 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4247 IPR002611 IstB-like ATP-binding protein YPTS_4247 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPTS_4247 IPR003593 AAA+ ATPase domain YPTS_4248 IPR017894 HTH domain, IS21 transposase-type YPTS_4248 IPR001584 Integrase, catalytic core YPTS_4248 IPR012337 Ribonuclease H-like superfamily YPTS_4250 IPR025948 HTH-like domain YPTS_4250 IPR001584 Integrase, catalytic core YPTS_4250 IPR012337 Ribonuclease H-like superfamily YPTS_4250 IPR036397 Ribonuclease H superfamily YPTS_4251 IPR010261 Tir chaperone protein (CesT) family YPTS_4251 IPR005416 Type III secretion chaperone SycE YPTS_4252 IPR003537 Yersinia virulence determinant YopE YPTS_4252 IPR014773 Virulence factor YopE, GAP domain YPTS_4252 IPR015110 YopE, N-terminal domain YPTS_4252 IPR037168 Virulence factor YopE, GAP domain superfamily YPTS_4254 IPR010985 Ribbon-helix-helix YPTS_4254 IPR022789 Antitoxin ParD YPTS_4254 IPR038296 Antitoxin ParD superfamily YPTS_4257 IPR036086 ParB/Sulfiredoxin superfamily YPTS_4257 IPR004437 ParB/RepB/Spo0J partition protein YPTS_4257 IPR040873 SopB, HTH domain YPTS_4257 IPR003115 ParB/Sulfiredoxin YPTS_4258 IPR025669 AAA domain YPTS_4258 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4260 IPR012337 Ribonuclease H-like superfamily YPTS_4261 IPR025948 HTH-like domain YPTS_4261 IPR001584 Integrase, catalytic core YPTS_4261 IPR012337 Ribonuclease H-like superfamily YPTS_4261 IPR036397 Ribonuclease H superfamily YPTS_4263 IPR008874 Enterobacterial TraT complement resistance YPTS_4264 IPR016505 Type III secretion system YopQ YPTS_4265 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen YPTS_4265 IPR038765 Papain-like cysteine peptidase superfamily YPTS_4265 IPR006473 Peptidase C58, YopT-type domain YPTS_4266 IPR010261 Tir chaperone protein (CesT) family YPTS_4270 IPR032675 Leucine-rich repeat domain superfamily YPTS_4270 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTS_4270 IPR001611 Leucine-rich repeat YPTS_4270 IPR032675 Leucine-rich repeat domain superfamily YPTS_4270 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPTS_4270 IPR001611 Leucine-rich repeat YPTS_4272 IPR001207 Transposase, mutator type YPTS_4273 IPR008898 YopD-like YPTS_4274 IPR006972 Secretion system effector C, SseC-like YPTS_4275 IPR013026 Tetratricopeptide repeat-containing domain YPTS_4275 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD YPTS_4275 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup YPTS_4275 IPR011716 Tetratricopeptide TPR-3 YPTS_4275 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_4276 IPR005413 Low calcium response V antigen YPTS_4276 IPR036139 Virulence-associated V antigen superfamily YPTS_4277 IPR009863 Type III secretion protein, LcrG YPTS_4278 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 YPTS_4278 IPR013405 Type III secretion system regulator, LcrR YPTS_4279 IPR042194 FHIPEP, domain 1 YPTS_4279 IPR025505 FHIPEP conserved site YPTS_4279 IPR042196 FHIPEP, domain 4 YPTS_4279 IPR042193 FHIPEP, domain 3 YPTS_4279 IPR006302 Type III secretion protein HrcV YPTS_4279 IPR001712 Type III secretion system FHIPEP YPTS_4280 IPR016684 Type III secretion system chaperone, YscY YPTS_4280 IPR011990 Tetratricopeptide-like helical domain superfamily YPTS_4281 IPR012672 Type III secretion system YscX YPTS_4282 IPR012673 Type III secretion system chaperone SycN YPTS_4283 IPR013351 Type III secretion system effector delivery regulator TyeA-related YPTS_4283 IPR015144 Type III secretion system effector delivery regulator TyeA YPTS_4283 IPR038347 TyeA superfamily YPTS_4284 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC YPTS_4284 IPR010812 Hypersensitivity response secretion-like, HrpJ YPTS_4285 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPTS_4285 IPR005714 ATPase, type III secretion system, FliI/YscN YPTS_4285 IPR013380 ATPase, type III secretion system, H+-transporting YPTS_4285 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPTS_4285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPTS_4285 IPR040627 T3SS EscN ATPase, C-terminal YPTS_4285 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPTS_4285 IPR003593 AAA+ ATPase domain YPTS_4286 IPR009929 Type III secretion sytem,YscO YPTS_4287 IPR021136 Flagellar hook-length control protein-like, C-terminal YPTS_4287 IPR013354 Type III secretion system needle length determinant, C-terminal domain YPTS_4288 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPTS_4288 IPR003283 Type III secretion system outer membrane, SpaO YPTS_4288 IPR036429 SpoA-like superfamily YPTS_4288 IPR001543 Surface presentation of antigen (SpoA) YPTS_4289 IPR005838 Type III secretion system inner membrane P protein YPTS_4289 IPR005773 Yop virulence translocation protein R YPTS_4290 IPR006306 Type III secretion protein HrpO YPTS_4290 IPR002191 Bacterial export protein family 3 YPTS_4291 IPR006304 Type III secretion protein SpaR/YscT YPTS_4291 IPR002010 Type III secretion system inner membrane R protein YPTS_4292 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPTS_4292 IPR006135 Type III secretion system substrate exporter YPTS_4292 IPR029025 Type III secretion system substrate exporter, C-terminal