YPK_0001 SM00382 ATPases associated with a variety of cellular activities YPK_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain YPK_0002 SM00480 DNA polymerase III beta subunit YPK_0004 SM00387 Histidine kinase-like ATPases YPK_0004 SM00433 TopoisomeraseII YPK_0016 SM00642 Alpha-amylase domain YPK_0034 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_0034 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_0034 SM01358 YPK_0034 YPK_0037 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_0058 SM00382 ATPases associated with a variety of cellular activities YPK_0060 SM00342 helix_turn_helix, arabinose operon control protein YPK_0068 SM00382 ATPases associated with a variety of cellular activities YPK_0081 SM00421 helix_turn_helix, Lux Regulon YPK_0081 SM00448 cheY-homologous receiver domain YPK_0082 SM00387 Histidine kinase-like ATPases YPK_0085 SM00912 haemagglutination activity domain YPK_0091 SM00382 ATPases associated with a variety of cellular activities YPK_0092 SM00382 ATPases associated with a variety of cellular activities YPK_0094 SM00052 Putative diguanylate phosphodiesterase YPK_0094 SM00267 diguanylate cyclase YPK_0103 SM00052 Putative diguanylate phosphodiesterase YPK_0107 SM00869 Autotransporter beta-domain YPK_0118 SM00235 Zinc-dependent metalloprotease YPK_0119 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPK_0124 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_0124 SM00387 Histidine kinase-like ATPases YPK_0124 SM00388 His Kinase A (phosphoacceptor) domain YPK_0124 SM00448 cheY-homologous receiver domain YPK_0125 SM00382 ATPases associated with a variety of cellular activities YPK_0131 SM00448 cheY-homologous receiver domain YPK_0131 SM00862 Transcriptional regulatory protein, C terminal YPK_0134 SM00354 helix_turn _helix lactose operon repressor YPK_0141 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPK_0145 SM00257 Lysin motif YPK_0145 SM00634 Bacterial Ig-like domain (group 1) YPK_0147 SM00642 Alpha-amylase domain YPK_0148 SM00642 Alpha-amylase domain YPK_0157 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_0157 SM01134 YPK_0157 YPK_0159 SM00450 Rhodanese Homology Domain YPK_0160 SM00421 helix_turn_helix, Lux Regulon YPK_0169 SM00899 YPK_0169 YPK_0170 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_0170 SM00732 Likely ribonuclease with RNase H fold. YPK_0172 SM00448 cheY-homologous receiver domain YPK_0172 SM00862 Transcriptional regulatory protein, C terminal YPK_0173 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_0173 SM00387 Histidine kinase-like ATPases YPK_0173 SM00388 His Kinase A (phosphoacceptor) domain YPK_0176 SM00363 S4 RNA-binding domain YPK_0240 SM00354 helix_turn _helix lactose operon repressor YPK_0248 SM00100 Cyclic nucleotide-monophosphate binding domain YPK_0248 SM00419 helix_turn_helix, cAMP Regulatory protein YPK_0258 SM00062 Bacterial periplasmic substrate-binding proteins YPK_0259 SM00382 ATPases associated with a variety of cellular activities YPK_0264 SM00382 ATPases associated with a variety of cellular activities YPK_0277 SM00838 Elongation factor G C-terminus YPK_0277 SM00889 Elongation factor G, domain IV YPK_0279 SM01321 YPK_0279 YPK_0282 SM01403 YPK_0282 YPK_0286 SM01382 YPK_0286 YPK_0286 SM01383 YPK_0286 YPK_0289 SM00322 K homology RNA-binding domain YPK_0293 SM01374 YPK_0293 YPK_0294 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPK_0307 SM00363 S4 RNA-binding domain YPK_0307 SM01390 YPK_0307 YPK_0308 SM00662 RNA polymerases D YPK_0310 SM00422 helix_turn_helix, mercury resistance YPK_0334 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPK_0334 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPK_0335 SM00649 Ribosomal protein L11/L12 YPK_0341 SM00663 RNA polymerase I subunit A N-terminus YPK_0342 SM00876 Biotin and Thiamin Synthesis associated domain YPK_0354 SM00411 bacterial (prokaryotic) histone like domain YPK_0356 SM01209 YPK_0356 YPK_0356 SM01210 YPK_0356 YPK_0357 SM00798 AICARFT/IMPCHase bienzyme YPK_0357 SM00851 MGS-like domain YPK_0367 SM00346 helix_turn_helix isocitrate lyase regulation YPK_0368 SM01018 B12 binding domain YPK_0380 SM00382 ATPases associated with a variety of cellular activities YPK_0395 SM00382 ATPases associated with a variety of cellular activities YPK_0395 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_0415 SM00342 helix_turn_helix, arabinose operon control protein YPK_0418 SM01133 YPK_0418 YPK_0421 SM00062 Bacterial periplasmic substrate-binding proteins YPK_0424 SM00382 ATPases associated with a variety of cellular activities YPK_0432 SM00382 ATPases associated with a variety of cellular activities YPK_0442 SM00357 Cold shock protein domain YPK_0443 SM00357 Cold shock protein domain YPK_0444 SM00357 Cold shock protein domain YPK_0446 SM00849 Metallo-beta-lactamase superfamily YPK_0450 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_0450 SM00895 YPK_0450 YPK_0458 SM00878 Biotin carboxylase C-terminal domain YPK_0463 SM00829 Enoylreductase YPK_0464 SM00052 Putative diguanylate phosphodiesterase YPK_0464 SM00267 diguanylate cyclase YPK_0469 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_0494 SM00642 Alpha-amylase domain YPK_0496 SM00354 helix_turn _helix lactose operon repressor YPK_0506 SM00382 ATPases associated with a variety of cellular activities YPK_0510 SM00116 Domain in cystathionine beta-synthase and other proteins. YPK_0512 SM00382 ATPases associated with a variety of cellular activities YPK_0519 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPK_0520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPK_0531 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_0533 SM00073 Histidine Phosphotransfer domain YPK_0533 SM00091 PAS domain YPK_0533 SM00387 Histidine kinase-like ATPases YPK_0533 SM00388 His Kinase A (phosphoacceptor) domain YPK_0533 SM00448 cheY-homologous receiver domain YPK_0536 SM00749 bacterial OsmY and nodulation domain YPK_0552 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_0552 SM00895 YPK_0552 YPK_0556 SM00858 YPK_0556 YPK_0561 SM00869 Autotransporter beta-domain YPK_0565 SM00220 Serine/Threonine protein kinases, catalytic domain YPK_0567 SM00327 von Willebrand factor (vWF) type A domain YPK_0568 SM00327 von Willebrand factor (vWF) type A domain YPK_0570 SM00327 von Willebrand factor (vWF) type A domain YPK_0572 SM00912 haemagglutination activity domain YPK_0583 SM00869 Autotransporter beta-domain YPK_0586 SM00382 ATPases associated with a variety of cellular activities YPK_0588 SM00354 helix_turn _helix lactose operon repressor YPK_0593 SM01217 YPK_0593 YPK_0622 SM00885 D5 N terminal like YPK_0635 SM00400 zinc finger YPK_0635 SM00493 YPK_0635 YPK_0635 SM00766 DNA primase DnaG DnaB-binding YPK_0638 SM01207 YPK_0638 YPK_0639 SM00905 Dihydroneopterin aldolase YPK_0641 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_0642 SM00287 Bacterial SH3 domain homologues YPK_0643 SM01118 YPK_0643 YPK_0659 SM00387 Histidine kinase-like ATPases YPK_0659 SM00433 TopoisomeraseII YPK_0662 SM00434 DNA Topoisomerase IV YPK_0663 SM00563 Phosphate acyltransferases YPK_0666 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_0669 SM00342 helix_turn_helix, arabinose operon control protein YPK_0692 SM00060 Fibronectin type 3 domain YPK_0693 SM00060 Fibronectin type 3 domain YPK_0693 SM00636 YPK_0693 YPK_0709 SM00382 ATPases associated with a variety of cellular activities YPK_0714 SM00382 ATPases associated with a variety of cellular activities YPK_0718 SM00858 YPK_0718 YPK_0725 SM00862 Transcriptional regulatory protein, C terminal YPK_0737 SM00052 Putative diguanylate phosphodiesterase YPK_0737 SM00091 PAS domain YPK_0737 SM00267 diguanylate cyclase YPK_0743 SM00869 Autotransporter beta-domain YPK_0744 SM00364 Leucine-rich repeats, bacterial type YPK_0745 SM00364 Leucine-rich repeats, bacterial type YPK_0746 SM00364 Leucine-rich repeats, bacterial type YPK_0751 SM00823 Phosphopantetheine attachment site YPK_0751 SM00825 Beta-ketoacyl synthase YPK_0757 SM00382 ATPases associated with a variety of cellular activities YPK_0758 SM00382 ATPases associated with a variety of cellular activities YPK_0763 SM00869 Autotransporter beta-domain YPK_0779 SM00354 helix_turn _helix lactose operon repressor YPK_0785 SM01006 Siderophore biosynthesis protein domain YPK_0791 SM00421 helix_turn_helix, Lux Regulon YPK_0804 SM00382 ATPases associated with a variety of cellular activities YPK_0804 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_0813 SM00382 ATPases associated with a variety of cellular activities YPK_0820 SM00478 endonuclease III YPK_0820 SM00525 YPK_0820 YPK_0826 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_0828 SM01152 YPK_0828 YPK_0833 SM00382 ATPases associated with a variety of cellular activities YPK_0836 SM00732 Likely ribonuclease with RNase H fold. YPK_0842 SM00731 SprT homologues. YPK_0846 SM01321 YPK_0846 YPK_0848 SM01321 YPK_0848 YPK_0850 SM00861 Transketolase, pyrimidine binding domain YPK_0851 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPK_0863 SM01011 Aminopeptidase P, N-terminal domain YPK_0878 SM00448 cheY-homologous receiver domain YPK_0878 SM00862 Transcriptional regulatory protein, C terminal YPK_0879 SM00387 Histidine kinase-like ATPases YPK_0879 SM00388 His Kinase A (phosphoacceptor) domain YPK_0923 SM00937 YPK_0923 YPK_0945 SM00778 Zinc-binding domain of primase-helicase YPK_0966 SM00382 ATPases associated with a variety of cellular activities YPK_0967 SM00382 ATPases associated with a variety of cellular activities YPK_0976 SM00354 helix_turn _helix lactose operon repressor YPK_0979 SM00354 helix_turn _helix lactose operon repressor YPK_0995 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_0995 SM01134 YPK_0995 YPK_0998 SM00869 Autotransporter beta-domain YPK_1001 SM00947 Carbonic anhydrase YPK_1005 SM00382 ATPases associated with a variety of cellular activities YPK_1016 SM00862 Transcriptional regulatory protein, C terminal YPK_1018 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_1018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1018 SM00319 Homologues of the ligand binding domain of Tar YPK_1020 SM00849 Metallo-beta-lactamase superfamily YPK_1025 SM00354 helix_turn _helix lactose operon repressor YPK_1027 SM00563 Phosphate acyltransferases YPK_1032 SM00927 DNA mismatch repair enzyme MutH YPK_1034 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YPK_1046 SM00646 YPK_1046 YPK_1047 SM00925 MltA specific insert domain YPK_1055 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPK_1055 SM00475 5'-3' exonuclease YPK_1064 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_1073 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPK_1075 SM00935 Outer membrane protein (OmpH-like) YPK_1081 SM00481 DNA polymerase alpha chain like domain YPK_1084 SM00977 TilS substrate C-terminal domain YPK_1088 SM01322 YPK_1088 YPK_1096 SM00382 ATPases associated with a variety of cellular activities YPK_1096 SM00930 YPK_1096 YPK_1105 SM00257 Lysin motif YPK_1106 SM00849 Metallo-beta-lactamase superfamily YPK_1109 SM00479 YPK_1109 YPK_1115 SM00382 ATPases associated with a variety of cellular activities YPK_1124 SM00357 Cold shock protein domain YPK_1128 SM00382 ATPases associated with a variety of cellular activities YPK_1129 SM00382 ATPases associated with a variety of cellular activities YPK_1134 SM00988 UreE urease accessory protein, N-terminal domain YPK_1147 SM00342 helix_turn_helix, arabinose operon control protein YPK_1155 SM00448 cheY-homologous receiver domain YPK_1155 SM00862 Transcriptional regulatory protein, C terminal YPK_1156 SM00387 Histidine kinase-like ATPases YPK_1156 SM00388 His Kinase A (phosphoacceptor) domain YPK_1167 SM00796 Allophanate hydrolase subunit 1 YPK_1168 SM00797 Allophanate hydrolase subunit 2 YPK_1173 SM00986 Uracil DNA glycosylase superfamily YPK_1173 SM00987 UreE urease accessory protein, C-terminal domain YPK_1177 SM00248 ankyrin repeats YPK_1179 SM00487 DEAD-like helicases superfamily YPK_1179 SM00490 helicase superfamily c-terminal domain YPK_1189 SM00358 Double-stranded RNA binding motif YPK_1189 SM00535 Ribonuclease III family YPK_1197 SM00487 DEAD-like helicases superfamily YPK_1202 SM00990 YPK_1202 YPK_1204 SM00482 DNA polymerase A domain YPK_1210 SM00530 Helix-turn-helix XRE-family like proteins YPK_1211 SM00530 Helix-turn-helix XRE-family like proteins YPK_1221 SM00530 Helix-turn-helix XRE-family like proteins YPK_1252 SM00062 Bacterial periplasmic substrate-binding proteins YPK_1253 SM01211 YPK_1253 YPK_1257 SM00387 Histidine kinase-like ATPases YPK_1257 SM00388 His Kinase A (phosphoacceptor) domain YPK_1259 SM00382 ATPases associated with a variety of cellular activities YPK_1259 SM00448 cheY-homologous receiver domain YPK_1262 SM00938 Nitrogen regulatory protein P-II YPK_1279 SM00271 DnaJ molecular chaperone homology domain YPK_1286 SM00869 Autotransporter beta-domain YPK_1288 SM00247 Beta/gamma crystallins YPK_1289 SM00562 YPK_1289 YPK_1291 SM00028 Tetratricopeptide repeats YPK_1292 SM00530 Helix-turn-helix XRE-family like proteins YPK_1296 SM00564 beta-propeller repeat YPK_1302 SM00116 Domain in cystathionine beta-synthase and other proteins. YPK_1302 SM01240 YPK_1302 YPK_1315 SM00409 Immunoglobulin YPK_1315 SM00634 Bacterial Ig-like domain (group 1) YPK_1324 SM00046 Diacylglycerol kinase catalytic domain (presumed) YPK_1327 SM00448 cheY-homologous receiver domain YPK_1327 SM00862 Transcriptional regulatory protein, C terminal YPK_1328 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1328 SM00387 Histidine kinase-like ATPases YPK_1328 SM00388 His Kinase A (phosphoacceptor) domain YPK_1333 SM00382 ATPases associated with a variety of cellular activities YPK_1334 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_1341 SM00924 MgtE intracellular N domain YPK_1347 SM00382 ATPases associated with a variety of cellular activities YPK_1362 SM01130 YPK_1362 YPK_1377 SM00382 ATPases associated with a variety of cellular activities YPK_1384 SM00421 helix_turn_helix, Lux Regulon YPK_1384 SM00448 cheY-homologous receiver domain YPK_1387 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_1391 SM00919 Malic enzyme, NAD binding domain YPK_1391 SM01274 YPK_1391 YPK_1396 SM00869 Autotransporter beta-domain YPK_1400 SM01130 YPK_1400 YPK_1403 SM00364 Leucine-rich repeats, bacterial type YPK_1411 SM00382 ATPases associated with a variety of cellular activities YPK_1414 SM00448 cheY-homologous receiver domain YPK_1414 SM00862 Transcriptional regulatory protein, C terminal YPK_1415 SM00387 Histidine kinase-like ATPases YPK_1415 SM00388 His Kinase A (phosphoacceptor) domain YPK_1416 SM00327 von Willebrand factor (vWF) type A domain YPK_1421 SM00450 Rhodanese Homology Domain YPK_1422 SM00382 ATPases associated with a variety of cellular activities YPK_1424 SM00448 cheY-homologous receiver domain YPK_1424 SM00862 Transcriptional regulatory protein, C terminal YPK_1425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1425 SM00387 Histidine kinase-like ATPases YPK_1425 SM00388 His Kinase A (phosphoacceptor) domain YPK_1431 SM00771 ZipA, C-terminal domain (FtsZ-binding) YPK_1432 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPK_1432 SM00292 breast cancer carboxy-terminal domain YPK_1432 SM00532 Ligase N family YPK_1456 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_1461 SM00382 ATPases associated with a variety of cellular activities YPK_1465 SM00421 helix_turn_helix, Lux Regulon YPK_1474 SM00382 ATPases associated with a variety of cellular activities YPK_1474 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_1496 SM00382 ATPases associated with a variety of cellular activities YPK_1512 SM00463 Small MutS-related domain YPK_1520 SM00825 Beta-ketoacyl synthase YPK_1526 SM00342 helix_turn_helix, arabinose operon control protein YPK_1528 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPK_1538 SM00062 Bacterial periplasmic substrate-binding proteins YPK_1541 SM00382 ATPases associated with a variety of cellular activities YPK_1543 SM00052 Putative diguanylate phosphodiesterase YPK_1549 SM00354 helix_turn _helix lactose operon repressor YPK_1557 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_1564 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPK_1565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_1565 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPK_1578 SM00354 helix_turn _helix lactose operon repressor YPK_1592 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPK_1597 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPK_1597 SM00091 PAS domain YPK_1597 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_1598 SM00382 ATPases associated with a variety of cellular activities YPK_1600 SM00062 Bacterial periplasmic substrate-binding proteins YPK_1600 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPK_1610 SM00829 Enoylreductase YPK_1612 SM00382 ATPases associated with a variety of cellular activities YPK_1614 SM00354 helix_turn _helix lactose operon repressor YPK_1616 SM01329 YPK_1616 YPK_1622 SM00912 haemagglutination activity domain YPK_1628 SM00530 Helix-turn-helix XRE-family like proteins YPK_1631 SM00382 ATPases associated with a variety of cellular activities YPK_1633 SM00354 helix_turn _helix lactose operon repressor YPK_1655 SM00421 helix_turn_helix, Lux Regulon YPK_1658 SM01091 Transporter associated domain YPK_1668 SM00450 Rhodanese Homology Domain YPK_1671 SM00421 helix_turn_helix, Lux Regulon YPK_1677 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_1678 SM00363 S4 RNA-binding domain YPK_1679 SM01321 YPK_1679 YPK_1685 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPK_1686 SM00822 YPK_1686 YPK_1688 SM00825 Beta-ketoacyl synthase YPK_1706 SM00487 DEAD-like helicases superfamily YPK_1706 SM00490 helicase superfamily c-terminal domain YPK_1706 SM00982 YPK_1706 YPK_1706 SM01058 CarD-like/TRCF domain YPK_1708 SM00382 ATPases associated with a variety of cellular activities YPK_1713 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YPK_1714 SM00387 Histidine kinase-like ATPases YPK_1714 SM00388 His Kinase A (phosphoacceptor) domain YPK_1715 SM00448 cheY-homologous receiver domain YPK_1715 SM00862 Transcriptional regulatory protein, C terminal YPK_1723 SM01329 YPK_1723 YPK_1724 SM00354 helix_turn _helix lactose operon repressor YPK_1726 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPK_1726 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_1733 SM00344 helix_turn_helix ASNC type YPK_1737 SM00829 Enoylreductase YPK_1739 SM01038 Beta galactosidase small chain YPK_1740 SM00357 Cold shock protein domain YPK_1742 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_1742 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1742 SM00319 Homologues of the ligand binding domain of Tar YPK_1744 SM00831 Cation transporter/ATPase, N-terminus YPK_1749 SM00073 Histidine Phosphotransfer domain YPK_1749 SM00260 Two component signalling adaptor domain YPK_1749 SM00387 Histidine kinase-like ATPases YPK_1749 SM01231 YPK_1749 YPK_1750 SM00260 Two component signalling adaptor domain YPK_1753 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_1753 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1753 SM00319 Homologues of the ligand binding domain of Tar YPK_1756 SM00138 Methyltransferase, chemotaxis proteins YPK_1757 SM00448 cheY-homologous receiver domain YPK_1758 SM00448 cheY-homologous receiver domain YPK_1760 SM00644 YPK_1760 YPK_1764 SM01005 Alanine racemase, C-terminal domain YPK_1771 SM01022 YPK_1771 YPK_1773 SM00972 Spore Coat Protein U domain YPK_1776 SM00972 Spore Coat Protein U domain YPK_1777 SM00972 Spore Coat Protein U domain YPK_1778 SM00972 Spore Coat Protein U domain YPK_1782 SM00945 ProQ/FINO family YPK_1783 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPK_1783 SM00245 tail specific protease YPK_1793 SM00346 helix_turn_helix isocitrate lyase regulation YPK_1794 SM00644 YPK_1794 YPK_1799 SM00382 ATPases associated with a variety of cellular activities YPK_1814 SM00382 ATPases associated with a variety of cellular activities YPK_1820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPK_1825 SM00873 B3/4 domain YPK_1825 SM00874 tRNA synthetase B5 domain YPK_1825 SM00896 Ferredoxin-fold anticodon binding domain YPK_1826 SM00411 bacterial (prokaryotic) histone like domain YPK_1830 SM00382 ATPases associated with a variety of cellular activities YPK_1849 SM00382 ATPases associated with a variety of cellular activities YPK_1862 SM00354 helix_turn _helix lactose operon repressor YPK_1868 SM00479 YPK_1868 YPK_1876 SM00347 helix_turn_helix multiple antibiotic resistance protein YPK_1881 SM00363 S4 RNA-binding domain YPK_1888 SM00382 ATPases associated with a variety of cellular activities YPK_1889 SM00382 ATPases associated with a variety of cellular activities YPK_1893 SM00382 ATPases associated with a variety of cellular activities YPK_1900 SM00953 YPK_1900 YPK_1902 SM00091 PAS domain YPK_1902 SM00382 ATPases associated with a variety of cellular activities YPK_1904 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPK_1908 SM00422 helix_turn_helix, mercury resistance YPK_1913 SM00890 Domain of unknown function YPK_1925 SM00382 ATPases associated with a variety of cellular activities YPK_1925 SM00487 DEAD-like helicases superfamily YPK_1925 SM00490 helicase superfamily c-terminal domain YPK_1925 SM00847 Helicase associated domain (HA2) Add an annotation YPK_1927 SM00530 Helix-turn-helix XRE-family like proteins YPK_1928 SM00020 Trypsin-like serine protease YPK_1931 SM00867 YceI-like domain YPK_1936 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_1936 SM00387 Histidine kinase-like ATPases YPK_1936 SM00388 His Kinase A (phosphoacceptor) domain YPK_1937 SM00448 cheY-homologous receiver domain YPK_1937 SM00862 Transcriptional regulatory protein, C terminal YPK_1941 SM01002 Alanine dehydrogenase/PNT, C-terminal domain YPK_1941 SM01003 Alanine dehydrogenase/PNT, N-terminal domain YPK_1944 SM00100 Cyclic nucleotide-monophosphate binding domain YPK_1944 SM00419 helix_turn_helix, cAMP Regulatory protein YPK_1946 SM00098 Alkaline phosphatase homologues YPK_1956 SM00382 ATPases associated with a variety of cellular activities YPK_1961 SM00382 ATPases associated with a variety of cellular activities YPK_1965 SM00354 helix_turn _helix lactose operon repressor YPK_1975 SM00382 ATPases associated with a variety of cellular activities YPK_1988 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_1988 SM00866 YPK_1988 YPK_1996 SM00342 helix_turn_helix, arabinose operon control protein YPK_1998 SM00382 ATPases associated with a variety of cellular activities YPK_2002 SM00382 ATPases associated with a variety of cellular activities YPK_2004 SM00382 ATPases associated with a variety of cellular activities YPK_2009 SM00342 helix_turn_helix, arabinose operon control protein YPK_2011 SM00900 YPK_2011 YPK_2013 SM00478 endonuclease III YPK_2013 SM00525 YPK_2013 YPK_2016 SM00357 Cold shock protein domain YPK_2016 SM00955 YPK_2016 YPK_2021 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_2024 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YPK_2026 SM00028 Tetratricopeptide repeats YPK_2028 SM00014 Acid phosphatase homologues YPK_2033 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPK_2033 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPK_2033 SM00493 YPK_2033 YPK_2037 SM00822 YPK_2037 YPK_2039 SM00363 S4 RNA-binding domain YPK_2041 SM00481 DNA polymerase alpha chain like domain YPK_2048 SM00749 bacterial OsmY and nodulation domain YPK_2063 SM00155 Phospholipase D. Active site motifs. YPK_2066 SM00382 ATPases associated with a variety of cellular activities YPK_2067 SM00382 ATPases associated with a variety of cellular activities YPK_2074 SM00528 Domain in histone-like proteins of HNS family YPK_2077 SM00984 UDP binding domain YPK_2078 SM00448 cheY-homologous receiver domain YPK_2088 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPK_2088 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPK_2088 SM00493 YPK_2088 YPK_2092 SM00870 YPK_2092 YPK_2096 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPK_2100 SM00763 PrkA AAA domain YPK_2109 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_2124 SM00341 Helicase and RNase D C-terminal YPK_2124 SM00474 3'-5' exonuclease YPK_2128 SM00487 DEAD-like helicases superfamily YPK_2128 SM00491 YPK_2128 YPK_2139 SM00257 Lysin motif YPK_2141 SM00382 ATPases associated with a variety of cellular activities YPK_2143 SM00382 ATPases associated with a variety of cellular activities YPK_2144 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPK_2155 SM00836 DALR anticodon binding domain YPK_2155 SM01016 Arginyl tRNA synthetase N terminal dom YPK_2156 SM00912 haemagglutination activity domain YPK_2165 SM00481 DNA polymerase alpha chain like domain YPK_2168 SM00382 ATPases associated with a variety of cellular activities YPK_2179 SM00937 YPK_2179 YPK_2184 SM01400 YPK_2184 YPK_2192 SM00448 cheY-homologous receiver domain YPK_2192 SM00862 Transcriptional regulatory protein, C terminal YPK_2193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_2193 SM00387 Histidine kinase-like ATPases YPK_2193 SM00388 His Kinase A (phosphoacceptor) domain YPK_2205 SM00671 Sel1-like repeats. YPK_2207 SM00671 Sel1-like repeats. YPK_2221 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_2221 SM00866 YPK_2221 YPK_2232 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_2232 SM00387 Histidine kinase-like ATPases YPK_2234 SM01321 YPK_2234 YPK_2246 SM00382 ATPases associated with a variety of cellular activities YPK_2255 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_2255 SM01134 YPK_2255 YPK_2269 SM00421 helix_turn_helix, Lux Regulon YPK_2269 SM00448 cheY-homologous receiver domain YPK_2277 SM00382 ATPases associated with a variety of cellular activities YPK_2284 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_2284 SM00866 YPK_2284 YPK_2310 SM00530 Helix-turn-helix XRE-family like proteins YPK_2319 SM00479 YPK_2319 YPK_2355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPK_2355 SM00465 GIY-YIG type nucleases (URI domain) YPK_2356 SM00421 helix_turn_helix, Lux Regulon YPK_2356 SM00448 cheY-homologous receiver domain YPK_2374 SM00382 ATPases associated with a variety of cellular activities YPK_2376 SM00062 Bacterial periplasmic substrate-binding proteins YPK_2376 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPK_2385 SM00342 helix_turn_helix, arabinose operon control protein YPK_2386 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_2387 SM00478 endonuclease III YPK_2394 SM00382 ATPases associated with a variety of cellular activities YPK_2409 SM00382 ATPases associated with a variety of cellular activities YPK_2413 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_2417 SM00047 Lysozyme subfamily 2 YPK_2426 SM00858 YPK_2426 YPK_2429 SM00634 Bacterial Ig-like domain (group 1) YPK_2444 SM01022 YPK_2444 YPK_2446 SM00487 DEAD-like helicases superfamily YPK_2446 SM00490 helicase superfamily c-terminal domain YPK_2452 SM00903 Flavin reductase like domain YPK_2462 SM00347 helix_turn_helix multiple antibiotic resistance protein YPK_2463 SM01091 Transporter associated domain YPK_2470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPK_2470 SM00091 PAS domain YPK_2470 SM00267 diguanylate cyclase YPK_2474 SM00357 Cold shock protein domain YPK_2484 SM00342 helix_turn_helix, arabinose operon control protein YPK_2487 SM00382 ATPases associated with a variety of cellular activities YPK_2488 SM00090 RIO-like kinase YPK_2491 SM00354 helix_turn _helix lactose operon repressor YPK_2499 SM00421 helix_turn_helix, Lux Regulon YPK_2499 SM00448 cheY-homologous receiver domain YPK_2508 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPK_2513 SM00634 Bacterial Ig-like domain (group 1) YPK_2520 SM00382 ATPases associated with a variety of cellular activities YPK_2533 SM01321 YPK_2533 YPK_2535 SM01350 YPK_2535 YPK_2543 SM00382 ATPases associated with a variety of cellular activities YPK_2545 SM01006 Siderophore biosynthesis protein domain YPK_2549 SM01091 Transporter associated domain YPK_2562 SM00919 Malic enzyme, NAD binding domain YPK_2562 SM01274 YPK_2562 YPK_2565 SM00382 ATPases associated with a variety of cellular activities YPK_2571 SM00829 Enoylreductase YPK_2576 SM00382 ATPases associated with a variety of cellular activities YPK_2578 SM00852 Probable molybdopterin binding domain YPK_2581 SM00382 ATPases associated with a variety of cellular activities YPK_2602 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPK_2610 SM00825 Beta-ketoacyl synthase YPK_2620 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPK_2621 SM00992 Hemimethylated DNA-binding protein YccV like YPK_2622 SM00881 CoA binding domain YPK_2624 SM00851 MGS-like domain YPK_2631 SM01321 YPK_2631 YPK_2636 SM00825 Beta-ketoacyl synthase YPK_2640 SM00382 ATPases associated with a variety of cellular activities YPK_2641 SM00981 YPK_2641 YPK_2652 SM00849 Metallo-beta-lactamase superfamily YPK_2662 SM00357 Cold shock protein domain YPK_2663 SM01150 YPK_2663 YPK_2665 SM00382 ATPases associated with a variety of cellular activities YPK_2666 SM00849 Metallo-beta-lactamase superfamily YPK_2667 SM00411 bacterial (prokaryotic) histone like domain YPK_2668 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_2674 SM00870 YPK_2674 YPK_2683 SM00382 ATPases associated with a variety of cellular activities YPK_2685 SM00843 YPK_2685 YPK_2686 SM00344 helix_turn_helix ASNC type YPK_2688 SM00382 ATPases associated with a variety of cellular activities YPK_2689 SM00382 ATPases associated with a variety of cellular activities YPK_2691 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_2692 SM00382 ATPases associated with a variety of cellular activities YPK_2692 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_2694 SM00357 Cold shock protein domain YPK_2695 SM00382 ATPases associated with a variety of cellular activities YPK_2709 SM00830 Chorismate mutase type II YPK_2710 SM00382 ATPases associated with a variety of cellular activities YPK_2711 SM00062 Bacterial periplasmic substrate-binding proteins YPK_2711 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPK_2718 SM00382 ATPases associated with a variety of cellular activities YPK_2721 SM00244 prohibitin homologues YPK_2724 SM00062 Bacterial periplasmic substrate-binding proteins YPK_2724 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPK_2729 SM00382 ATPases associated with a variety of cellular activities YPK_2736 SM00014 Acid phosphatase homologues YPK_2737 SM01133 YPK_2737 YPK_2738 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_2738 SM01134 YPK_2738 YPK_2740 SM00936 Penicillin-binding protein 5, C-terminal domain YPK_2742 SM00382 ATPases associated with a variety of cellular activities YPK_2742 SM00930 YPK_2742 YPK_2749 SM00382 ATPases associated with a variety of cellular activities YPK_2756 SM00518 AP endonuclease family 2 YPK_2761 SM00862 Transcriptional regulatory protein, C terminal YPK_2767 SM00382 ATPases associated with a variety of cellular activities YPK_2777 SM00841 Elongation factor P, C-terminal YPK_2777 SM01185 YPK_2777 YPK_2780 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_2780 SM00895 YPK_2780 YPK_2782 SM00833 Cobalamin synthesis protein cobW C-terminal domain YPK_2783 SM00014 Acid phosphatase homologues YPK_2785 SM00052 Putative diguanylate phosphodiesterase YPK_2789 SM00382 ATPases associated with a variety of cellular activities YPK_2793 SM00363 S4 RNA-binding domain YPK_2794 SM00487 DEAD-like helicases superfamily YPK_2794 SM00490 helicase superfamily c-terminal domain YPK_2824 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_2824 SM01134 YPK_2824 YPK_2825 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_2829 SM00530 Helix-turn-helix XRE-family like proteins YPK_2833 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPK_2833 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_2842 SM00387 Histidine kinase-like ATPases YPK_2843 SM00421 helix_turn_helix, Lux Regulon YPK_2843 SM00448 cheY-homologous receiver domain YPK_2844 SM00387 Histidine kinase-like ATPases YPK_2844 SM00388 His Kinase A (phosphoacceptor) domain YPK_2844 SM00448 cheY-homologous receiver domain YPK_2846 SM00434 DNA Topoisomerase IV YPK_2852 SM00852 Probable molybdopterin binding domain YPK_2855 SM01060 YPK_2855 YPK_2856 SM00487 DEAD-like helicases superfamily YPK_2856 SM00488 YPK_2856 YPK_2856 SM00491 YPK_2856 YPK_2863 SM00382 ATPases associated with a variety of cellular activities YPK_2866 SM00450 Rhodanese Homology Domain YPK_2869 SM00382 ATPases associated with a variety of cellular activities YPK_2878 SM00382 ATPases associated with a variety of cellular activities YPK_2881 SM00507 HNH nucleases YPK_2889 SM01321 YPK_2889 YPK_2891 SM00490 helicase superfamily c-terminal domain YPK_2898 SM00487 DEAD-like helicases superfamily YPK_2898 SM00490 helicase superfamily c-terminal domain YPK_2901 SM00382 ATPases associated with a variety of cellular activities YPK_2907 SM00382 ATPases associated with a variety of cellular activities YPK_2907 SM00448 cheY-homologous receiver domain YPK_2908 SM00091 PAS domain YPK_2908 SM00387 Histidine kinase-like ATPases YPK_2908 SM00388 His Kinase A (phosphoacceptor) domain YPK_2922 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_2926 SM00487 DEAD-like helicases superfamily YPK_2926 SM00490 helicase superfamily c-terminal domain YPK_2927 SM00382 ATPases associated with a variety of cellular activities YPK_2931 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_2931 SM00876 Biotin and Thiamin Synthesis associated domain YPK_2935 SM00382 ATPases associated with a variety of cellular activities YPK_2940 SM00382 ATPases associated with a variety of cellular activities YPK_2948 SM00855 Phosphoglycerate mutase family YPK_2965 SM00881 CoA binding domain YPK_2968 SM00861 Transketolase, pyrimidine binding domain YPK_2992 SM01081 Putative carbohydrate binding domain YPK_2995 SM01321 YPK_2995 YPK_3005 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_3008 SM00116 Domain in cystathionine beta-synthase and other proteins. YPK_3008 SM01091 Transporter associated domain YPK_3010 SM00062 Bacterial periplasmic substrate-binding proteins YPK_3013 SM00382 ATPases associated with a variety of cellular activities YPK_3024 SM00936 Penicillin-binding protein 5, C-terminal domain YPK_3027 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_3031 SM00357 Cold shock protein domain YPK_3033 SM00421 helix_turn_helix, Lux Regulon YPK_3037 SM00382 ATPases associated with a variety of cellular activities YPK_3044 SM00382 ATPases associated with a variety of cellular activities YPK_3053 SM01359 YPK_3053 YPK_3053 SM01360 YPK_3053 YPK_3064 SM00869 Autotransporter beta-domain YPK_3067 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YPK_3069 SM00363 S4 RNA-binding domain YPK_3072 SM01217 YPK_3072 YPK_3080 SM00195 Dual specificity phosphatase, catalytic domain YPK_3080 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPK_3082 SM00563 Phosphate acyltransferases YPK_3098 SM00232 JAB/MPN domain YPK_3102 SM00530 Helix-turn-helix XRE-family like proteins YPK_3152 SM00840 YPK_3152 YPK_3155 SM01001 AIR carboxylase YPK_3158 SM00382 ATPases associated with a variety of cellular activities YPK_3160 SM00822 YPK_3160 YPK_3162 SM00244 prohibitin homologues YPK_3164 SM00422 helix_turn_helix, mercury resistance YPK_3173 SM01321 YPK_3173 YPK_3195 SM00387 Histidine kinase-like ATPases YPK_3196 SM00493 YPK_3196 YPK_3198 SM00382 ATPases associated with a variety of cellular activities YPK_3209 SM01321 YPK_3209 YPK_3220 SM00938 Nitrogen regulatory protein P-II YPK_3221 SM00382 ATPases associated with a variety of cellular activities YPK_3222 SM00382 ATPases associated with a variety of cellular activities YPK_3223 SM00344 helix_turn_helix ASNC type YPK_3231 SM00411 bacterial (prokaryotic) histone like domain YPK_3232 SM00382 ATPases associated with a variety of cellular activities YPK_3232 SM00464 Found in ATP-dependent protease La (LON) YPK_3233 SM00382 ATPases associated with a variety of cellular activities YPK_3233 SM00994 ClpX C4-type zinc finger YPK_3233 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_3250 SM00981 YPK_3250 YPK_3253 SM00861 Transketolase, pyrimidine binding domain YPK_3263 SM01323 YPK_3263 YPK_3271 SM00642 Alpha-amylase domain YPK_3275 SM00091 PAS domain YPK_3275 SM00387 Histidine kinase-like ATPases YPK_3275 SM00388 His Kinase A (phosphoacceptor) domain YPK_3276 SM00448 cheY-homologous receiver domain YPK_3276 SM00862 Transcriptional regulatory protein, C terminal YPK_3288 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPK_3293 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins YPK_3303 SM00900 YPK_3303 YPK_3312 SM00710 Parallel beta-helix repeats YPK_3312 SM00912 haemagglutination activity domain YPK_3316 SM01321 YPK_3316 YPK_3321 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_3326 SM00382 ATPases associated with a variety of cellular activities YPK_3329 SM00062 Bacterial periplasmic substrate-binding proteins YPK_3337 SM00347 helix_turn_helix multiple antibiotic resistance protein YPK_3340 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPK_3342 SM01144 YPK_3342 YPK_3343 SM00881 CoA binding domain YPK_3344 SM00155 Phospholipase D. Active site motifs. YPK_3349 SM00382 ATPases associated with a variety of cellular activities YPK_3349 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_3351 SM00363 S4 RNA-binding domain YPK_3355 SM00830 Chorismate mutase type II YPK_3356 SM00830 Chorismate mutase type II YPK_3358 SM00448 cheY-homologous receiver domain YPK_3358 SM00850 LytTr DNA-binding domain YPK_3365 SM00382 ATPases associated with a variety of cellular activities YPK_3365 SM00962 SRP54-type protein, GTPase domain YPK_3365 SM00963 SRP54-type protein, helical bundle domain YPK_3367 SM01091 Transporter associated domain YPK_3373 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPK_3375 SM00382 ATPases associated with a variety of cellular activities YPK_3382 SM00861 Transketolase, pyrimidine binding domain YPK_3385 SM00382 ATPases associated with a variety of cellular activities YPK_3394 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_3395 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_3397 SM00420 helix_turn_helix, Deoxyribose operon repressor YPK_3397 SM01134 YPK_3397 YPK_3399 SM00382 ATPases associated with a variety of cellular activities YPK_3411 SM01235 YPK_3411 YPK_3412 SM00062 Bacterial periplasmic substrate-binding proteins YPK_3415 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YPK_3418 SM01120 YPK_3418 YPK_3421 SM00829 Enoylreductase YPK_3424 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YPK_3424 SM00534 ATPase domain of DNA mismatch repair MUTS family YPK_3426 SM00257 Lysin motif YPK_3446 SM01192 YPK_3446 YPK_3446 SM01193 YPK_3446 YPK_3449 SM00954 Region found in RelA / SpoT proteins YPK_3451 SM00073 Histidine Phosphotransfer domain YPK_3451 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_3451 SM00387 Histidine kinase-like ATPases YPK_3451 SM00388 His Kinase A (phosphoacceptor) domain YPK_3451 SM00448 cheY-homologous receiver domain YPK_3452 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPK_3453 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_3462 SM00382 ATPases associated with a variety of cellular activities YPK_3464 SM00487 DEAD-like helicases superfamily YPK_3464 SM00490 helicase superfamily c-terminal domain YPK_3464 SM00847 Helicase associated domain (HA2) Add an annotation YPK_3477 SM00382 ATPases associated with a variety of cellular activities YPK_3478 SM00947 Carbonic anhydrase YPK_3488 SM01321 YPK_3488 YPK_3492 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_3492 SM00895 YPK_3492 YPK_3496 SM00644 YPK_3496 YPK_3501 SM01240 YPK_3501 YPK_3506 SM01321 YPK_3506 YPK_3509 SM00957 SecA DEAD-like domain YPK_3509 SM00958 SecA preprotein cross-linking domain YPK_3513 SM00864 Tubulin/FtsZ family, GTPase domain YPK_3513 SM00865 Tubulin/FtsZ family, C-terminal domain YPK_3514 SM00842 Cell division protein FtsA YPK_3529 SM00354 helix_turn _helix lactose operon repressor YPK_3535 SM00917 LeuA allosteric (dimerisation) domain YPK_3536 SM01329 YPK_3536 YPK_3544 SM00382 ATPases associated with a variety of cellular activities YPK_3546 SM00486 DNA polymerase type-B family YPK_3547 SM00487 DEAD-like helicases superfamily YPK_3547 SM00490 helicase superfamily c-terminal domain YPK_3559 SM00382 ATPases associated with a variety of cellular activities YPK_3559 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_3569 SM00271 DnaJ molecular chaperone homology domain YPK_3573 SM00650 Ribosomal RNA adenine dimethylases YPK_3582 SM00851 MGS-like domain YPK_3582 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPK_3583 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YPK_3589 SM00904 Riboflavin kinase YPK_3593 SM00271 DnaJ molecular chaperone homology domain YPK_3598 SM00852 Probable molybdopterin binding domain YPK_3606 SM00448 cheY-homologous receiver domain YPK_3606 SM00862 Transcriptional regulatory protein, C terminal YPK_3609 SM00342 helix_turn_helix, arabinose operon control protein YPK_3609 SM00871 Bacterial transcription activator, effector binding domain YPK_3610 SM00855 Phosphoglycerate mutase family YPK_3614 SM00831 Cation transporter/ATPase, N-terminus YPK_3616 SM00267 diguanylate cyclase YPK_3618 SM00382 ATPases associated with a variety of cellular activities YPK_3620 SM00530 Helix-turn-helix XRE-family like proteins YPK_3621 SM00382 ATPases associated with a variety of cellular activities YPK_3626 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain YPK_3627 SM01133 YPK_3627 YPK_3632 SM00749 bacterial OsmY and nodulation domain YPK_3638 SM00267 diguanylate cyclase YPK_3650 SM00382 ATPases associated with a variety of cellular activities YPK_3654 SM01133 YPK_3654 YPK_3661 SM00342 helix_turn_helix, arabinose operon control protein YPK_3666 SM00487 DEAD-like helicases superfamily YPK_3674 SM00487 DEAD-like helicases superfamily YPK_3689 SM00382 ATPases associated with a variety of cellular activities YPK_3690 SM00382 ATPases associated with a variety of cellular activities YPK_3693 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_3693 SM00866 YPK_3693 YPK_3698 SM00382 ATPases associated with a variety of cellular activities YPK_3699 SM00382 ATPases associated with a variety of cellular activities YPK_3701 SM00072 Guanylate kinase homologues. YPK_3702 SM00849 Metallo-beta-lactamase superfamily YPK_3703 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPK_3706 SM00382 ATPases associated with a variety of cellular activities YPK_3722 SM00530 Helix-turn-helix XRE-family like proteins YPK_3724 SM00487 DEAD-like helicases superfamily YPK_3724 SM00490 helicase superfamily c-terminal domain YPK_3725 SM00028 Tetratricopeptide repeats YPK_3726 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_3726 SM00322 K homology RNA-binding domain YPK_3727 SM01387 YPK_3727 YPK_3731 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_3731 SM00322 K homology RNA-binding domain YPK_3736 SM00382 ATPases associated with a variety of cellular activities YPK_3738 SM01103 YPK_3738 YPK_3741 SM00448 cheY-homologous receiver domain YPK_3741 SM00862 Transcriptional regulatory protein, C terminal YPK_3742 SM00387 Histidine kinase-like ATPases YPK_3742 SM00388 His Kinase A (phosphoacceptor) domain YPK_3772 SM00116 Domain in cystathionine beta-synthase and other proteins. YPK_3772 SM01091 Transporter associated domain YPK_3790 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPK_3791 SM00316 Ribosomal protein S1-like RNA-binding domain YPK_3791 SM00357 Cold shock protein domain YPK_3791 SM00955 YPK_3791 YPK_3793 SM00788 Adenylosuccinate synthetase YPK_3795 SM00244 prohibitin homologues YPK_3796 SM00244 prohibitin homologues YPK_3801 SM00853 MutL C terminal dimerisation domain YPK_3801 SM01340 YPK_3801 YPK_3802 SM00257 Lysin motif YPK_3802 SM00646 YPK_3802 YPK_3808 SM00479 YPK_3808 YPK_3818 SM00841 Elongation factor P, C-terminal YPK_3818 SM01185 YPK_3818 YPK_3823 SM00883 Chaperonin 10 Kd subunit YPK_3829 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPK_3834 SM01276 YPK_3834 YPK_3841 SM00342 helix_turn_helix, arabinose operon control protein YPK_3842 SM00342 helix_turn_helix, arabinose operon control protein YPK_3847 SM01007 Class II Aldolase and Adducin N-terminal domain YPK_3854 SM01005 Alanine racemase, C-terminal domain YPK_3855 SM00382 ATPases associated with a variety of cellular activities YPK_3856 SM00829 Enoylreductase YPK_3862 SM00563 Phosphate acyltransferases YPK_3865 SM00869 Autotransporter beta-domain YPK_3866 SM00060 Fibronectin type 3 domain YPK_3885 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_3893 SM00382 ATPases associated with a variety of cellular activities YPK_3906 SM00382 ATPases associated with a variety of cellular activities YPK_3914 SM00342 helix_turn_helix, arabinose operon control protein YPK_3918 SM00387 Histidine kinase-like ATPases YPK_3918 SM00388 His Kinase A (phosphoacceptor) domain YPK_3918 SM00448 cheY-homologous receiver domain YPK_3919 SM00421 helix_turn_helix, Lux Regulon YPK_3919 SM00448 cheY-homologous receiver domain YPK_3937 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPK_3937 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPK_3938 SM01004 Delta-aminolevulinic acid dehydratase YPK_3955 SM00530 Helix-turn-helix XRE-family like proteins YPK_3959 SM00382 ATPases associated with a variety of cellular activities YPK_3970 SM00382 ATPases associated with a variety of cellular activities YPK_3971 SM00382 ATPases associated with a variety of cellular activities YPK_3978 SM00382 ATPases associated with a variety of cellular activities YPK_3979 SM00382 ATPases associated with a variety of cellular activities YPK_3979 SM00962 SRP54-type protein, GTPase domain YPK_3979 SM00963 SRP54-type protein, helical bundle domain YPK_3998 SM00341 Helicase and RNase D C-terminal YPK_3998 SM00487 DEAD-like helicases superfamily YPK_3998 SM00490 helicase superfamily c-terminal domain YPK_3998 SM00956 YPK_3998 YPK_4013 SM01219 YPK_4013 YPK_4030 SM00984 UDP binding domain YPK_4034 SM00357 Cold shock protein domain YPK_4034 SM00382 ATPases associated with a variety of cellular activities YPK_4034 SM00959 Rho termination factor, N-terminal domain YPK_4036 SM00487 DEAD-like helicases superfamily YPK_4036 SM00490 helicase superfamily c-terminal domain YPK_4048 SM00507 HNH nucleases YPK_4062 SM00382 ATPases associated with a variety of cellular activities YPK_4067 SM00382 ATPases associated with a variety of cellular activities YPK_4084 SM00382 ATPases associated with a variety of cellular activities YPK_4089 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPK_4099 SM00487 DEAD-like helicases superfamily YPK_4099 SM00490 helicase superfamily c-terminal domain YPK_4101 SM00354 helix_turn _helix lactose operon repressor YPK_4104 SM00382 ATPases associated with a variety of cellular activities YPK_4104 SM01086 C-terminal, D2-small domain, of ClpB protein YPK_4110 SM00382 ATPases associated with a variety of cellular activities YPK_4132 SM00448 cheY-homologous receiver domain YPK_4132 SM00862 Transcriptional regulatory protein, C terminal YPK_4133 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPK_4133 SM00387 Histidine kinase-like ATPases YPK_4133 SM00388 His Kinase A (phosphoacceptor) domain YPK_4134 SM00342 helix_turn_helix, arabinose operon control protein YPK_4136 SM00971 Serine acetyltransferase, N-terminal YPK_4140 SM00450 Rhodanese Homology Domain YPK_4144 SM00829 Enoylreductase YPK_4152 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YPK_4152 SM01232 YPK_4152 YPK_4175 SM00532 Ligase N family YPK_4176 SM00072 Guanylate kinase homologues. YPK_4177 SM01409 YPK_4177 YPK_4178 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPK_4178 SM00954 Region found in RelA / SpoT proteins YPK_4180 SM00487 DEAD-like helicases superfamily YPK_4180 SM00490 helicase superfamily c-terminal domain YPK_4189 SM01230 YPK_4189 YPK_4190 SM00091 PAS domain YPK_4190 SM00387 Histidine kinase-like ATPases YPK_4190 SM00388 His Kinase A (phosphoacceptor) domain YPK_4191 SM00382 ATPases associated with a variety of cellular activities YPK_4191 SM00448 cheY-homologous receiver domain YPK_4192 SM00729 Elongator protein 3, MiaB family, Radical SAM YPK_4195 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPK_4195 SM00474 3'-5' exonuclease YPK_4195 SM00475 5'-3' exonuclease YPK_4195 SM00482 DNA polymerase A domain YPK_4206 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPK_4206 SM00895 YPK_4206 YPK_4212 SM00382 ATPases associated with a variety of cellular activities YPK_4213 SM00327 von Willebrand factor (vWF) type A domain YPK_4215 SM00344 helix_turn_helix ASNC type YPK_4217 SM01228 YPK_4217 YPK_4226 SM00382 ATPases associated with a variety of cellular activities YPK_4234 SM00382 ATPases associated with a variety of cellular activities YPK_4237 SM00062 Bacterial periplasmic substrate-binding proteins YPK_4247 SM01234 YPK_4247