locus_tag old_locus_tag gene Name start end strand product note type ID NCBI YPK_0001 YPK_0001 YPK_0001 37 1389 + chromosomal replication initiator protein DnaA KEGG: ypi:YpsIP31758_4153 chromosomal replication initiator protein DnaA~TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA domain%3B Chromosomal replication initiator DnaA~SMART: AAA ATPase gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0001 YPK_0002 YPK_0002 YPK_0002 1394 2494 + DNA polymerase III%2C beta subunit KEGG: ypi:YpsIP31758_4152 DNA polymerase III%2C beta subunit~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0002 YPK_0003 YPK_0003 YPK_0003 2667 3752 + DNA replication and repair protein RecF TIGRFAM: DNA replication and repair protein RecF~PFAM: SMC domain protein~KEGG: yps:YPTB3941 DNA metabolism protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0003 YPK_0004 YPK_0004 YPK_0004 3772 6186 + DNA gyrase%2C B subunit KEGG: ypi:YpsIP31758_4150 DNA gyrase%2C B subunit~TIGRFAM: DNA gyrase%2C B subunit~PFAM: DNA gyrase subunit B domain protein%3B ATP-binding region ATPase domain protein%3B TOPRIM domain protein%3B DNA topoisomerase type IIA subunit B region 2 domain protein~SMART: DNA topoisomerase II gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0004 YPK_0005 YPK_0005 YPK_0005 6402 7211 + Cof-like hydrolase TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase%3B Haloacid dehalogenase domain protein hydrolase type 3~KEGG: ypi:YpsIP31758_4149 Cof-like hydrolase gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0005 YPK_0006 YPK_0006 YPK_0006 7529 7696 + hypothetical protein gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0006 YPK_0007 YPK_0007 YPK_0007 7806 8759 - Ornithine cyclodeaminase PFAM: ornithine cyclodeaminase/mu-crystallin~KEGG: ypi:YpsIP31758_4147 ornithine cyclodeaminase/mu-crystallin family gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0007 YPK_0008 YPK_0008 YPK_0008 8753 9715 - Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypp:YPDSF_0008 pyridoxal-phosphate dependent enzyme gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0008 YPK_0009 YPK_0009 YPK_0009 9923 11224 + conserved hypothetical protein KEGG: yps:YPTB3902 hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0009 YPK_0010 YPK_0010 YPK_0010 11264 11602 - protein of unknown function DUF1375 PFAM: protein of unknown function DUF1375~KEGG: yps:YPTB3903 putative lipoprotein gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0010 YPK_0011 YPK_0011 YPK_0011 11970 12383 + heat shock protein Hsp20 PFAM: heat shock protein Hsp20~KEGG: ypi:YpsIP31758_4143 small heat shock protein IbpA gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0011 YPK_0012 YPK_0012 YPK_0012 12664 13128 + heat shock protein Hsp20 PFAM: heat shock protein Hsp20~KEGG: ypi:YpsIP31758_4142 small heat shock protein IbpB gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0012 YPK_0013 YPK_0013 YPK_0013 13501 15159 + YidE/YbjL duplication TIGRFAM: YidE/YbjL duplication~PFAM: TrkA-C domain protein%3B YidE/YbjL duplication domain protein~KEGG: ypi:YpsIP31758_4141 putative transport protein YidE gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0013 YPK_0014 YPK_0014 YPK_0014 15272 16642 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: yps:YPTB3907 valine--pyruvate transaminase gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0014 YPK_0015 YPK_0015 YPK_0015 16993 17436 - conserved hypothetical protein KEGG: yps:YPTB3908 hypothetical protein gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0015 YPK_0016 YPK_0016 YPK_0016 17850 19913 - alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: ypp:YPDSF_0016 alpha-amylase protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0016 YPK_0017 YPK_0017 YPK_0017 20183 21163 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: ypi:YpsIP31758_4137 2-ketogluconate reductase gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0017 YPK_0018 YPK_0018 YPK_0018 21718 22362 + putative transcriptional regulator KEGG: ypi:YpsIP31758_4136 hypothetical protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0018 YPK_0019 YPK_0019 YPK_0019 22493 23152 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein%3B 17 kDa surface antigen~KEGG: yps:YPTB3912 OmpA-OmpF family porin gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0019 YPK_0020 YPK_0020 YPK_0020 23510 23965 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: yps:YPTB3913 putative acetyltransferase gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0020 YPK_0021 YPK_0021 YPK_0021 23962 24534 - DNA-3-methyladenine glycosylase I KEGG: yps:YPTB3914 DNA-3-methyladenine glycosylase~TIGRFAM: DNA-3-methyladenine glycosylase I~PFAM: methyladenine glycosylase gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0021 YPK_0022 YPK_0022 YPK_0022 24881 25795 + glycyl-tRNA synthetase%2C alpha subunit KEGG: ypi:YpsIP31758_4131 glycyl-tRNA synthetase%2C alpha subunit~TIGRFAM: glycyl-tRNA synthetase%2C alpha subunit~PFAM: glycyl-tRNA synthetase alpha subunit gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0022 YPK_0023 YPK_0023 YPK_0023 25805 27874 + glycyl-tRNA synthetase%2C beta subunit KEGG: ypi:YpsIP31758_4130 glycyl-tRNA synthetase%2C beta subunit~TIGRFAM: glycyl-tRNA synthetase%2C beta subunit gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0023 YPK_0024 YPK_0024 YPK_0024 28022 28252 + hypothetical protein gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0024 YPK_0025 YPK_0025 YPK_0025 28347 29066 + putative lipoprotein KEGG: ypi:YpsIP31758_4129 putative lipoprotein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0025 YPK_0026 YPK_0026 YPK_0026 29548 31479 + PTS system%2C mannitol-specific IIC subunit TIGRFAM: PTS system%2C mannitol-specific IIC subunit~PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2%3B phosphotransferase system EIIC%3B phosphotransferase system lactose/cellobiose-specific IIB subunit~KEGG: ypi:YpsIP31758_4128 PTS system%2C mannitol-specific EIICBA component gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0026 YPK_0027 YPK_0027 YPK_0027 31616 32779 + Mannitol dehydrogenase domain PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~KEGG: ypp:YPDSF_0026 mannitol-1-phosphate 5-dehydrogenase gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0027 YPK_0028 YPK_0028 YPK_0028 32986 33540 + mannitol repressor%2C MtlR PFAM: Mannitol repressor~KEGG: ypi:YpsIP31758_4126 mannitol operon repressor gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0028 YPK_0029 YPK_0029 YPK_0029 33619 33741 + hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0029 YPK_0030 YPK_0030 YPK_0030 33789 34145 + conserved hypothetical protein KEGG: ypi:YpsIP31758_4125 hypothetical protein gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0030 YPK_0031 YPK_0031 YPK_0031 34308 34784 - conserved hypothetical protein KEGG: ypi:YpsIP31758_4124 hypothetical protein gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0031 YPK_0032 YPK_0032 YPK_0032 35145 35240 + hypothetical protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0032 YPK_0033 YPK_0033 YPK_0033 35316 35600 - conserved hypothetical protein KEGG: ypi:YpsIP31758_4123 hypothetical protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0033 YPK_0034 YPK_0034 YPK_0034 35838 37787 - methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase HAMP region domain protein%3B chemotaxis sensory transducer~KEGG: ypi:YpsIP31758_4122 methyl-accepting chemotaxis protein gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0034 YPK_0035 YPK_0035 YPK_0035 38131 38754 - Superoxide dismutase PFAM: manganese and iron superoxide dismutase~KEGG: ypi:YpsIP31758_4121 superoxide dismutase (Mn) gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0035 YPK_0036 YPK_0036 YPK_0036 39189 40013 - formate dehydrogenase family accessory protein FdhD TIGRFAM: formate dehydrogenase family accessory protein FdhD~PFAM: formate dehydrogenase subunit FdhD~KEGG: yps:YPTB3926 putative formate dehydrogenase gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0036 YPK_0037 YPK_0037 YPK_0037 40210 40797 + molybdopterin oxidoreductase Fe4S4 region PFAM: molybdopterin oxidoreductase Fe4S4 region~KEGG: yps:YPTB3927 formate dehydrogenase-O%2C major subunit (formate dehydrogenase) gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0037 YPK_0038 YPK_0038 YPK_0038 40846 43257 + formate dehydrogenase%2C alpha subunit KEGG: ypi:YpsIP31758_4119 aerobic formate dehydrogenase%2C alpha subunit%2C proteobacterial-type~TIGRFAM: formate dehydrogenase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0038 YPK_0039 YPK_0039 YPK_0039 43270 44241 + formate dehydrogenase%2C beta subunit TIGRFAM: formate dehydrogenase%2C beta subunit~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B Formate dehydrogenase transmembrane domain protein~KEGG: ypi:YpsIP31758_4118 putative aerobic formate dehydrogenase%2C iron-sulfur subunit gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0039 YPK_0040 YPK_0040 YPK_0040 44238 44912 + formate dehydrogenase%2C gamma subunit TIGRFAM: formate dehydrogenase%2C gamma subunit~PFAM: cytochrome B561~KEGG: ypp:YPDSF_0037 formate dehydrogenase%2C cytochrome b556 protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0040 YPK_0041 YPK_0041 YPK_0041 44912 45841 + formate dehydrogenase accessory protein FdhE TIGRFAM: formate dehydrogenase accessory protein FdhE~PFAM: formate dehydrogenase accessory protein~KEGG: ypi:YpsIP31758_4116 formate dehydrogenase accessory protein FdhE gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0041 YPK_0042 YPK_0042 YPK_0042 46025 47413 + L-seryl-tRNA(Sec) selenium transferase PFAM: L-seryl-tRNA selenium transferase~KEGG: ypp:YPDSF_0039 L-seryl-tRNA selenium transferase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0042 YPK_0043 YPK_0043 YPK_0043 47410 49383 + selenocysteine-specific translation elongation factor TIGRFAM: selenocysteine-specific translation elongation factor~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B Elongation factor SelB winged helix 2%3B Elongation factor SelB winged helix 3~KEGG: yps:YPTB3932 selenocysteine-specific elongation factor EF gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0043 YPK_0044 YPK_0044 YPK_0044 50142 50474 + conserved hypothetical protein KEGG: yps:YPTB3934 hypothetical protein gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0044 YPK_0045 YPK_0045 YPK_0045 50488 51036 - conserved hypothetical protein KEGG: yps:YPTB3935 hypothetical protein gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0045 YPK_0046 YPK_0046 YPK_0046 51024 51209 - conserved hypothetical protein KEGG: ypp:YPDSF_0045 hypothetical protein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0046 YPK_0047 YPK_0047 YPK_0047 51330 51533 + conserved hypothetical protein KEGG: ypk:y4068 hypothetical protein gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0047 YPK_0048 YPK_0048 YPK_0048 51682 52911 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB3936 multidrug translocase%2C MFS family gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0048 YPK_0049 YPK_0049 YPK_0049 53310 53477 + hypothetical protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0049 YPK_0050 YPK_0050 YPK_0050 53772 54764 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: ypp:YPDSF_3787 membrane protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0050 YPK_0051 YPK_0051 YPK_0051 55655 56212 + Fimbrial protein PFAM: Fimbrial protein~KEGG: yps:YPTB3896 fimbrial protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0051 YPK_0052 YPK_0052 YPK_0052 56288 58786 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: yps:YPTB3895 outer membrane fimbrial usher porin gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0052 YPK_0053 YPK_0053 YPK_0053 58879 59646 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: yps:YPTB3894 putative fimbrial chaperone gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0053 YPK_0054 YPK_0054 YPK_0054 59685 60671 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypp:YPDSF_3782 hypothetical protein gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0054 YPK_0055 YPK_0055 YPK_0055 60770 62224 - xylulokinase TIGRFAM: xylulokinase~PFAM: carbohydrate kinase FGGY~KEGG: ypp:YPDSF_3781 xylulose kinase gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0055 YPK_0056 YPK_0056 YPK_0056 62348 63667 - xylose isomerase KEGG: ypi:YpsIP31758_4102 xylose isomerase~TIGRFAM: xylose isomerase~PFAM: Xylose isomerase domain protein TIM barrel gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0056 YPK_0057 YPK_0057 YPK_0057 64130 65125 + D-xylose ABC transporter%2C periplasmic substrate-binding protein KEGG: ypi:YpsIP31758_4101 D-xylose-binding periplasmic protein~TIGRFAM: D-xylose ABC transporter%2C periplasmic substrate-binding protein~PFAM: periplasmic binding protein/LacI transcriptional regulator gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0057 YPK_0058 YPK_0058 YPK_0058 65333 66865 + D-xylose ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_4100 D-xylose transport ATP-binding protein XylG~TIGRFAM: D-xylose ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0058 YPK_0059 YPK_0059 YPK_0059 66852 68036 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_4099 putative xylose transport system permease protein XylH gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0059 YPK_0060 YPK_0060 YPK_0060 68126 69319 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: ypi:YpsIP31758_4098 xylose operon regulatory protein gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0060 YPK_0061 YPK_0061 YPK_0061 69706 70896 + integrase family protein PFAM: integrase family protein~KEGG: plu:plu0125 hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0061 YPK_0062 YPK_0062 YPK_0062 71077 72345 + conserved hypothetical protein KEGG: pfo:Pfl_4624 hypothetical protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0062 YPK_0063 YPK_0063 YPK_0063 72381 73151 - hypothetical protein KEGG: pcr:Pcryo_2512 hypothetical protein gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0063 YPK_0064 YPK_0064 YPK_0064 73144 74259 - protein of unknown function DUF262 PFAM: protein of unknown function DUF262~KEGG: pcr:Pcryo_2494 protein of unknown function DUF262 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0064 YPK_0065 YPK_0065 YPK_0065 74300 75067 - N4/N6-methyltransferase family protein KEGG: ecw:EcE24377A_0286 N4/N6-methyltransferase family protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0065 YPK_0066 YPK_0066 YPK_0066 75549 75815 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: yps:pYV0018 putative transposase gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0066 YPK_0067 YPK_0067 YPK_0067 75893 76648 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: yps:pYV0019 putative transposase gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0067 YPK_0068 YPK_0068 YPK_0068 76836 77594 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypp:YPDSF_3768 iron ABC transporter%2C ATP-binding protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0068 YPK_0069 YPK_0069 YPK_0069 77591 78598 - transport system permease protein PFAM: transport system permease protein~KEGG: yps:YPTB3859 ABC iron siderophore transporter%2C permease subunit gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0069 YPK_0070 YPK_0070 YPK_0070 78588 79547 - transport system permease protein PFAM: transport system permease protein~KEGG: ypi:YpsIP31758_4092 iron chelate ABC transporter%2C permease protein gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0070 YPK_0071 YPK_0071 YPK_0071 79557 80510 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypi:YpsIP31758_4091 iron chelate ABC transporter%2C periplasmic iron-binding protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0071 YPK_0072 YPK_0072 YPK_0072 81033 82277 - phosphoribosylglycinamide synthetase PFAM: phosphoribosylglycinamide synthetase~KEGG: ypn:YPN_3669 hypothetical protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0072 YPK_0073 YPK_0073 YPK_0073 82279 83208 - conserved hypothetical protein KEGG: ypi:YpsIP31758_4089 hypothetical protein gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0073 YPK_0074 YPK_0074 YPK_0074 83291 83839 - phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: ypp:YPDSF_3762 phosphoribosyl transferase protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0074 YPK_0075 YPK_0075 YPK_0075 83832 84155 - pyridoxal-phosphate dependent protein KEGG: ypi:YpsIP31758_4087 pyridoxal-phosphate dependent protein gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0075 YPK_0076 YPK_0076 YPK_0076 84883 86574 + urocanate hydratase KEGG: ypm:YP_3380 urocanate hydratase~TIGRFAM: urocanate hydratase~PFAM: Urocanase gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0076 YPK_0077 YPK_0077 YPK_0077 86571 88103 + histidine ammonia-lyase KEGG: yps:YPTB3851 histidine ammonia-lyase~TIGRFAM: histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0077 YPK_0078 YPK_0078 YPK_0078 88470 89873 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypi:YpsIP31758_4084 amino acid permease family protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0078 YPK_0079 YPK_0079 YPK_0079 90341 91804 + conserved hypothetical protein KEGG: ypi:YpsIP31758_4082 hypothetical protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0079 YPK_0080 YPK_0080 YPK_0080 92315 94006 + sulfatase PFAM: sulfatase~KEGG: ypi:YpsIP31758_4081 phosphoethanolamine transferase gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0080 YPK_0081 YPK_0081 YPK_0081 94122 94712 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver%3B Sigma-70 region 4 type 2~KEGG: ypi:YpsIP31758_4080 transcriptional regulatory protein UhpA gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0081 YPK_0082 YPK_0082 YPK_0082 94709 96238 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B MASE1 domain protein%3B histidine kinase dimerisation and phosphoacceptor region~KEGG: yps:YPTB3846 putative sensor protein uhpB gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0082 YPK_0083 YPK_0083 YPK_0083 96333 97664 + phosphoglycerate transporter TIGRFAM: phosphoglycerate transporter~PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB3845 MFS family hexose phosphate uptake and regulatory protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0083 YPK_0085 YPK_0085 YPK_0085 98170 99561 + filamentous haemagglutinin family outer membrane protein TIGRFAM: filamentous haemagglutinin family outer membrane protein%3B adhesin HecA family~PFAM: filamentous haemagglutinin domain protein~KEGG: ypp:YPDSF_3371 hypothetical protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0085 YPK_0086 YPK_0086 YPK_0086 99670 101433 + Polypeptide-transport-associated domain protein ShlB-type PFAM: Hemolysin activator HlyB domain protein%3B Polypeptide-transport-associated domain protein ShlB-type~KEGG: ypn:YPN_3653 hemolysin activator protein gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0086 YPK_0087 YPK_0087 YPK_0087 101493 101699 + conserved hypothetical protein KEGG: ypm:YP_3366 hypothetical protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0087 YPK_0088 YPK_0088 YPK_0088 102102 103709 + 4-phytase PFAM: extracellular solute-binding protein family 5~KEGG: ypi:YpsIP31758_4075 dipeptide ABC transporter%2C periplasmic dipeptide-binding protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0088 YPK_0089 YPK_0089 YPK_0089 103992 105011 + Alkaline phosphatase PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_4074 dipeptide ABC transporter%2C permease protein DppB gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0089 YPK_0090 YPK_0090 YPK_0090 105022 105924 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_4073 dipeptide ABC transporter%2C permease protein DppC gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0090 YPK_0091 YPK_0091 YPK_0091 105938 106918 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_4072 dipeptide ABC transporter%2C ATP-binding protein DppD~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0091 YPK_0092 YPK_0092 YPK_0092 106915 107991 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: yps:YPTB3838 ABC dipeptide transporter%2C ATP-binding subunit~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0092 YPK_0093 YPK_0093 YPK_0093 108109 109224 + Cellulase PFAM: glycoside hydrolase family 8~KEGG: ypi:YpsIP31758_4070 endoglucanase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0093 YPK_0094 YPK_0094 YPK_0094 109540 111555 + diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B EAL domain protein%3B histidine kinase HAMP region domain protein~KEGG: ypn:YPN_3646 membrane protein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0094 YPK_0095 YPK_0095 YPK_0095 112196 112900 + Oligogalacturonate-specific porin PFAM: Oligogalacturonate-specific porin~KEGG: ypi:YpsIP31758_4068 oligogalacturonate-specific porin protein KdgM gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0095 YPK_0096 YPK_0096 YPK_0096 113146 114864 + Pectate lyase PFAM: periplasmic pectate lyase~KEGG: ypi:YpsIP31758_4066 periplasmic pectate lyase gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0096 YPK_0097 YPK_0097 YPK_0097 114989 115468 + coagulation factor 5/8 type domain protein PFAM: coagulation factor 5/8 type domain protein~KEGG: ypi:YpsIP31758_4065 F5/8 type C domain protein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0097 YPK_0098 YPK_0098 YPK_0098 115940 117229 + sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: yps:YPTB3832 DAACS family C4-dicarboxylate symporter gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0098 YPK_0099 YPK_0099 YPK_0099 117291 117407 - hypothetical protein gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0099 YPK_0100 YPK_0100 YPK_0100 117594 119093 + peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: ypi:YpsIP31758_4063 peptidase%2C M16 family gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0100 YPK_0101 YPK_0101 YPK_0101 119257 120201 - PfkB domain protein PFAM: PfkB domain protein~KEGG: ypi:YpsIP31758_4062 2-dehydro-3-deoxygluconokinase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0101 YPK_0102 YPK_0102 YPK_0102 120480 120680 - 4-oxalocrotonate tautomerase family enzyme TIGRFAM: 4-oxalocrotonate tautomerase family enzyme~PFAM: 4-oxalocrotonate tautomerase~KEGG: yps:YPTB3829 possible tautomerase enzyme gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0102 YPK_0103 YPK_0103 YPK_0103 120899 121744 + diguanylate phosphodiesterase PFAM: EAL domain protein~KEGG: yps:YPTB3828 hypothetical protein gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0103 YPK_0104 YPK_0104 YPK_0104 122049 124268 + AsmA family protein PFAM: AsmA family protein~KEGG: ypi:YpsIP31758_4058 AsmA family protein gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0104 YPK_0105 YPK_0105 YPK_0105 124273 125070 - CDP-diacylglycerol diphosphatase PFAM: CDP-diacylglycerol pyrophosphatase~KEGG: yps:YPTB3826 CDP-diacylglycerol pyrophosphatase gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0105 YPK_0106 YPK_0106 YPK_0106 125074 126174 - ribonuclease TIGRFAM: ribonuclease~PFAM: ribonuclease BN~KEGG: yps:YPTB3825 putative membrane protein gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0106 YPK_0107 YPK_0107 YPK_0107 126853 130065 + outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Pertactin%3B Autotransporter beta- domain protein~KEGG: yps:YPTB3824 putative pertactin family virulence factor/autotransporter gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0107 YPK_0108 YPK_0108 YPK_0108 130167 131036 + conserved hypothetical protein KEGG: yps:YPTB3823 hypothetical protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0108 YPK_0109 YPK_0109 YPK_0109 131023 131526 + protein of unknown function DUF943 PFAM: protein of unknown function DUF943~KEGG: yps:YPTB3822 hypothetical protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0109 YPK_0110 YPK_0110 YPK_0110 131595 132101 + protein of unknown function DUF943 PFAM: protein of unknown function DUF943~KEGG: ypp:YPDSF_3347 hypothetical protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0110 YPK_0111 YPK_0111 YPK_0111 132347 133483 - Glycerate kinase PFAM: glycerate kinase~KEGG: ypi:YpsIP31758_4052 glycerate kinase gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0111 YPK_0112 YPK_0112 YPK_0112 133494 134762 - Gluconate transporter PFAM: Gluconate transporter%3B Citrate transporter~KEGG: ypi:YpsIP31758_4051 transporter%2C gluconate:H+ symporter (GntP) family gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0112 YPK_0113 YPK_0113 YPK_0113 134940 136067 - transcriptional regulator%2C CdaR PFAM: sugar diacid recognition domain protein~KEGG: yps:YPTB3819 putative regulatory protein gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0113 YPK_0114 YPK_0114 YPK_0114 136278 137630 - glutathione-disulfide reductase TIGRFAM: glutathione-disulfide reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~KEGG: ypp:YPDSF_3342 glutathione reductase gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0114 YPK_0115 YPK_0115 YPK_0115 137798 138640 - protein of unknown function DUF519 PFAM: protein of unknown function DUF519~KEGG: ypi:YpsIP31758_4048 hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0115 YPK_0116 YPK_0116 YPK_0116 138969 141011 + Oligopeptidase A PFAM: peptidase M3A and M3B thimet/oligopeptidase F~KEGG: yps:YPTB3816 oligopeptidase A gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0116 YPK_0117 YPK_0117 YPK_0117 141015 141785 + protein of unknown function DUF548 PFAM: protein of unknown function DUF548~KEGG: ypi:YpsIP31758_4038 hypothetical protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0117 YPK_0118 YPK_0118 YPK_0118 141850 143184 - Serralysin KEGG: yps:YPTB3814 metalloprotease~PFAM: Hemolysin-type calcium-binding region%3B peptidase M10A and M12B matrixin and adamalysin%3B Peptidase M10 serralysin~SMART: peptidase metallopeptidase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0118 YPK_0119 YPK_0119 YPK_0119 143432 144775 - Glutamate dehydrogenase (NADP(+)) PFAM: Glu/Leu/Phe/Val dehydrogenase %3B Glu/Leu/Phe/Val dehydrogenase dimerisation region~KEGG: ypi:YpsIP31758_4036 NADP-specific glutamate dehydrogenase gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0119 YPK_0120 YPK_0120 YPK_0120 145022 145468 - UspA domain protein PFAM: UspA domain protein~KEGG: ypi:YpsIP31758_4035 universal stress protein A gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0120 YPK_0121 YPK_0121 YPK_0121 146159 146494 + universal stress protein B KEGG: ypi:YpsIP31758_4034 universal stress protein B gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0121 YPK_0122 YPK_0122 YPK_0122 146641 148236 - phosphate transporter PFAM: phosphate transporter~KEGG: ypp:YPDSF_3332 phosphate transport protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0122 YPK_0123 YPK_0123 YPK_0123 148262 149644 + HI0933 family protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B HI0933 family protein%3B FAD dependent oxidoreductase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ypn:YPN_3615 hypothetical protein gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0123 YPK_0124 YPK_0124 YPK_0124 149780 152335 - multi-sensor hybrid histidine kinase TIGRFAM: PAS sensor protein~PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B PAS fold-4 domain protein~KEGG: yps:YPTB3808 putative hybrid two-component system regulatory protein gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0124 YPK_0125 YPK_0125 YPK_0125 152524 154047 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB3807 ABC ribose transporter%2C fused ATP-binding domains gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0125 YPK_0126 YPK_0126 YPK_0126 154040 155032 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_4029 ribose ABC transporter%2C permease protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0126 YPK_0127 YPK_0127 YPK_0127 155063 156007 + periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_4028 ribose ABC transporter%2C periplasmic ribose-binding protein gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0127 YPK_0128 YPK_0128 YPK_0128 156082 156765 + protein of unknown function DUF1498 PFAM: protein of unknown function DUF1498~KEGG: ypi:YpsIP31758_4027 hypothetical protein gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0128 YPK_0129 YPK_0129 YPK_0129 156791 157651 + ketose-bisphosphate aldolase KEGG: ypi:YpsIP31758_4026 putative fructose-bisphosphate aldolase~TIGRFAM: ketose-bisphosphate aldolase~PFAM: ketose-bisphosphate aldolase class-II gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0129 YPK_0130 YPK_0130 YPK_0130 157661 158668 + PfkB domain protein PFAM: PfkB domain protein~KEGG: ypi:YpsIP31758_4025 kinase%2C PfkB family gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0130 YPK_0131 YPK_0131 YPK_0131 158743 159480 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypi:YpsIP31758_4024 DNA-binding response regulator gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0131 YPK_0132 YPK_0132 YPK_0132 159903 160115 + conserved hypothetical protein KEGG: ypn:YPN_3606 hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0132 YPK_0133 YPK_0133 YPK_0133 160244 160939 + Pirin domain protein PFAM: Pirin domain protein%3B Cupin 2 conserved barrel domain protein~KEGG: ypi:YpsIP31758_4023 YhhW family protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0133 YPK_0134 YPK_0134 YPK_0134 161125 162063 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: yps:YPTB3798 gluconate utilization system Gnt-I transcriptional repressor gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0134 YPK_0135 YPK_0135 YPK_0135 162155 163471 - gluconate transporter TIGRFAM: gluconate transporter~PFAM: Gluconate transporter%3B Citrate transporter~KEGG: yps:YPTB3797 putative indonate/gluconate permease%2C GntP family gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0135 YPK_0136 YPK_0136 YPK_0136 163688 164191 + carbohydrate kinase%2C thermoresistant glucokinase family KEGG: yps:YPTB3796 putative gluconokinase~TIGRFAM: carbohydrate kinase%2C thermoresistant glucokinase family~PFAM: shikimate kinase gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0136 YPK_0137 YPK_0137 YPK_0137 164373 164606 + conserved hypothetical protein KEGG: ypi:YpsIP31758_4019 hypothetical protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0137 YPK_0138 YPK_0138 YPK_0138 164797 164937 + hypothetical protein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0138 YPK_0139 YPK_0139 YPK_0139 164992 165381 + conserved hypothetical protein KEGG: ypp:YPDSF_3315 hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0139 YPK_0140 YPK_0140 YPK_0140 165566 166159 - multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: yps:YPTB3791 possible MarC family transporter gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0140 YPK_0141 YPK_0141 YPK_0141 166518 167621 + aspartate-semialdehyde dehydrogenase KEGG: ypi:YpsIP31758_4013 aspartate-semialdehyde dehydrogenase~TIGRFAM: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0141 YPK_0142 YPK_0142 YPK_0142 168356 168664 + conserved hypothetical protein KEGG: ypi:YpsIP31758_4011 hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0142 YPK_0143 YPK_0143 YPK_0143 168671 168958 + conserved hypothetical protein KEGG: ypi:YpsIP31758_4010 hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0143 YPK_0144 YPK_0144 YPK_0144 169116 169259 + conserved hypothetical protein KEGG: ecp:ECP_3769 hypothetical protein gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0144 YPK_0145 YPK_0145 YPK_0145 170696 186709 + conserved repeat domain protein TIGRFAM: conserved repeat domain protein~PFAM: Peptidoglycan-binding LysM%3B Ig domain protein group 1 domain protein~KEGG: yps:YPTB3789 possible bacterial Ig-like domain (group 1) gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0145 YPK_0146 YPK_0146 YPK_0146 186934 188631 - signal transduction histidine kinase%2C LytS PFAM: ATP-binding region ATPase domain protein%3B histidine kinase internal region%3B 5TM Receptors of the LytS-YhcK type transmembrane region~KEGG: yps:YPTB3788 putative membrane protein gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0146 YPK_0147 YPK_0147 YPK_0147 189137 191320 + 1%2C4-alpha-glucan branching enzyme KEGG: yps:YPTB3787 glycogen branching enzyme~TIGRFAM: 1%2C4-alpha-glucan branching enzyme~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region%3B alpha amylase all-beta~SMART: alpha amylase catalytic sub domain gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0147 YPK_0148 YPK_0148 YPK_0148 191322 193310 + glycogen debranching enzyme GlgX KEGG: yps:YPTB3786 putative alpha-amylase~TIGRFAM: glycogen debranching enzyme GlgX~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0148 YPK_0149 YPK_0149 YPK_0149 193320 194606 + glucose-1-phosphate adenylyltransferase TIGRFAM: glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase~KEGG: ypi:YpsIP31758_4004 glucose-1-phosphate adenylyltransferase gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0149 YPK_0150 YPK_0150 YPK_0150 194817 196247 + glycogen/starch synthase%2C ADP-glucose type TIGRFAM: glycogen/starch synthase%2C ADP-glucose type~PFAM: glycosyl transferase group 1%3B Starch synthase catalytic domain protein~KEGG: yps:YPTB3784 glycogen synthase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0150 YPK_0151 YPK_0151 YPK_0151 196560 199007 + glycogen/starch/alpha-glucan phosphorylase KEGG: yps:YPTB3783 glycogen phosphorylase~TIGRFAM: glycogen/starch/alpha-glucan phosphorylase~PFAM: glycosyl transferase family 35 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0151 YPK_0152 YPK_0152 YPK_0152 199169 200683 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: ypi:YpsIP31758_4000 aerobic glycerol-3-phosphate dehydrogenase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0152 YPK_0153 YPK_0153 YPK_0153 201082 201456 + conserved hypothetical protein KEGG: ypn:YPN_3584 hypothetical protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0153 YPK_0154 YPK_0154 YPK_0154 201765 202229 + protein of unknown function DUF943 PFAM: protein of unknown function DUF943~KEGG: yps:YPTB3781 hypothetical protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0154 YPK_0155 YPK_0155 YPK_0155 202248 202664 + conserved hypothetical protein KEGG: yps:YPTB3780 hypothetical protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0155 YPK_0156 YPK_0156 YPK_0156 203131 203298 + hypothetical protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0156 YPK_0157 YPK_0157 YPK_0157 203394 204152 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~KEGG: ypi:YpsIP31758_3997 glycerol-3-phosphate regulon repressor gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0157 YPK_0158 YPK_0158 YPK_0158 204187 205023 - Rhomboid family protein PFAM: Rhomboid family protein~KEGG: ypi:YpsIP31758_3996 peptidase%2C S54 (rhomboid) family protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0158 YPK_0159 YPK_0159 YPK_0159 205041 205370 - Rhodanese domain protein PFAM: Rhodanese domain protein~KEGG: ypi:YpsIP31758_3995 thiosulfate sulfurtransferase GlpE gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0159 YPK_0160 YPK_0160 YPK_0160 205745 208456 - ATP-dependent transcriptional regulator%2C MalT-like%2C LuxR family PFAM: regulatory protein LuxR~KEGG: ypi:YpsIP31758_3994 transcriptional regulator MalT gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0160 YPK_0161 YPK_0161 YPK_0161 208774 211179 + glycogen/starch/alpha-glucan phosphorylase KEGG: ypi:YpsIP31758_3993 maltodextrin phosphorylase~TIGRFAM: glycogen/starch/alpha-glucan phosphorylase~PFAM: glycosyl transferase family 35 gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0161 YPK_0162 YPK_0162 YPK_0162 211192 213288 + 4-alpha-glucanotransferase KEGG: ypi:YpsIP31758_3992 4-alpha-glucanotransferase~TIGRFAM: 4-alpha-glucanotransferase~PFAM: glycoside hydrolase family 77 gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0162 YPK_0163 YPK_0163 YPK_0163 213473 214048 - IscR-regulated protein YhgI TIGRFAM: IscR-regulated protein YhgI~PFAM: HesB/YadR/YfhF-family protein%3B nitrogen-fixing NifU domain protein~KEGG: ypi:YpsIP31758_3990 HesB-like domain/NifU-like domain protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0163 YPK_0164 YPK_0164 YPK_0164 214108 214809 - protein GntX KEGG: ypi:YpsIP31758_3989 protein GntX gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0164 YPK_0165 YPK_0165 YPK_0165 214896 215672 + bioH protein KEGG: ypi:YpsIP31758_3988 carboxylesterase BioH~TIGRFAM: bioH protein~PFAM: alpha/beta hydrolase fold gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0165 YPK_0166 YPK_0166 YPK_0166 215842 216111 + protein of unknown function DUF1471 PFAM: protein of unknown function DUF1471~KEGG: ypi:YpsIP31758_3987 hypothetical protein gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0166 YPK_0167 YPK_0167 YPK_0167 216249 216506 - Protein of unknown function DUF1920 PFAM: Protein of unknown function DUF1920~KEGG: ypi:YpsIP31758_3986 hypothetical protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0167 YPK_0168 YPK_0168 YPK_0168 216542 218857 - ferrous iron transport protein B TIGRFAM: ferrous iron transport protein B%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B Ferrous iron transport protein B domain protein%3B Ferrous iron transport B domain protein%3B nucleoside recognition domain protein~KEGG: ypi:YpsIP31758_3985 ferrous iron transport protein B gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0168 YPK_0169 YPK_0169 YPK_0169 218949 219176 - FeoA family protein PFAM: FeoA family protein~KEGG: ypi:YpsIP31758_3984 ferrous iron transport protein A gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0169 YPK_0170 YPK_0170 YPK_0170 219700 222075 - RNA binding S1 domain protein PFAM: RNA binding S1 domain protein~SMART: Resolvase RNase H domain protein fold~KEGG: yps:YPTB3766 hypothetical protein gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0170 YPK_0171 YPK_0171 YPK_0171 222609 223124 + transcription elongation factor GreB TIGRFAM: transcription elongation factor GreB~PFAM: transcription elongation factor GreA/GreB domain protein~KEGG: yps:YPTB3765 transcription elongation factor gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0171 YPK_0172 YPK_0172 YPK_0172 223260 223979 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: yps:YPTB3764 transcriptional regulatory protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0172 YPK_0173 YPK_0173 YPK_0173 223976 225328 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: yps:YPTB3763 osmolarity sensor protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0173 YPK_0174 YPK_0174 YPK_0174 225667 227286 - Phosphoenolpyruvate carboxykinase (ATP) PFAM: phosphoenolpyruvate carboxykinase (ATP)~KEGG: yps:YPTB3762 phosphoenolpyruvate carboxykinase gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0174 YPK_0175 YPK_0175 YPK_0175 227483 228364 - Hsp33 protein PFAM: Hsp33 protein~KEGG: ypi:YpsIP31758_3977 chaperonin HslO gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0175 YPK_0176 YPK_0176 YPK_0176 228527 228934 - RNA-binding S4 domain protein PFAM: RNA-binding S4 domain protein~KEGG: ypi:YpsIP31758_3976 heat shock protein 15 gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0176 YPK_0177 YPK_0177 YPK_0177 228963 229643 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypi:YpsIP31758_3975 HAD hydrolase%2C IA family gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0177 YPK_0178 YPK_0178 YPK_0178 229787 231934 - Intracellular growth attenuator IgaA PFAM: Intracellular growth attenuator IgaA~KEGG: ypi:YpsIP31758_3974 intracellular growth attenuator family protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0178 YPK_0179 YPK_0179 YPK_0179 232214 232408 + conserved hypothetical protein KEGG: ypm:YP_0144 hypothetical protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0179 YPK_0180 YPK_0180 YPK_0180 232521 233066 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_3973 ADP compounds hydrolase NudE gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0180 YPK_0181 YPK_0181 YPK_0181 233187 233942 - D12 class N6 adenine-specific DNA methyltransferase PFAM: D12 class N6 adenine-specific DNA methyltransferase~KEGG: cvi:CV_2111 probable methyltransferase gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0181 YPK_0182 YPK_0182 YPK_0182 234074 234511 - hypothetical protein KEGG: yps:YPTB1820 putative phage tail fiber assembly protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0182 YPK_0183 YPK_0183 YPK_0183 234521 235747 - tail fiber repeat 2 protein PFAM: tail fiber repeat 2 protein~KEGG: ypi:YpsIP31758_2198 tail collar domain protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0183 YPK_0184 YPK_0184 YPK_0184 235750 236319 - conserved hypothetical protein KEGG: cvi:CV_0342 hypothetical protein gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0184 YPK_0185 YPK_0185 YPK_0185 236316 237377 - Baseplate J family protein PFAM: Baseplate J family protein~KEGG: bbr:BB3612 putative phage tail protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0185 YPK_0186 YPK_0186 YPK_0186 237377 237721 - conserved hypothetical protein KEGG: bbr:BB3613 hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0186 YPK_0187 YPK_0187 YPK_0187 237782 238432 - phage baseplate assembly protein V TIGRFAM: phage baseplate assembly protein V~PFAM: Mu Gp45 domain protein~KEGG: cvi:CV_0345 probable bacteriophage base plate protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0187 YPK_0188 YPK_0188 YPK_0188 238422 239645 - putative phage tail protein KEGG: bbr:BB3615 putative phage tail protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0188 YPK_0189 YPK_0189 YPK_0189 239629 240948 - DNA circulation family protein PFAM: DNA circulation family protein~KEGG: bvi:Bcep1808_1292 DNA circulation family protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0189 YPK_0190 YPK_0190 YPK_0190 240950 243157 - conserved hypothetical protein KEGG: bbr:BB3617 hypothetical protein gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0190 YPK_0191 YPK_0191 YPK_0191 243157 243291 - hypothetical protein gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0191 YPK_0192 YPK_0192 YPK_0192 243312 243479 - hypothetical protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0192 YPK_0193 YPK_0193 YPK_0193 243595 243792 - hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0193 YPK_0194 YPK_0194 YPK_0194 243785 244285 - Protein of unknown function DUF1804 PFAM: Protein of unknown function DUF1804~KEGG: nma:NMA1854 hypothetical DNA-binding protein gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0194 YPK_0195 YPK_0195 YPK_0195 244288 244575 - hypothetical protein KEGG: dvu:DVU2703 hypothetical protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0195 YPK_0196 YPK_0196 YPK_0196 244572 244814 - conserved hypothetical protein KEGG: nma:NMA1196 hypothetical protein gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0196 YPK_0197 YPK_0197 YPK_0197 244811 245398 - conserved hypothetical protein KEGG: cvi:CV_2145 hypothetical protein gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0197 YPK_0198 YPK_0198 YPK_0198 245376 245630 - hypothetical protein gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0198 YPK_0199 YPK_0199 YPK_0199 245621 246259 - putative endolysin KEGG: ecv:APECO1_4061 putative endolysin gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0199 YPK_0200 YPK_0200 YPK_0200 246351 246620 - hypothetical protein gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0200 YPK_0201 YPK_0201 YPK_0201 246632 247069 - conserved hypothetical protein KEGG: bvi:Bcep1808_1315 hypothetical protein gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0201 YPK_0202 YPK_0202 YPK_0202 247066 247467 - protein of unknown function DUF1018 PFAM: protein of unknown function DUF1018~KEGG: dvu:DVU2695 hypothetical protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0202 YPK_0203 YPK_0203 YPK_0203 247452 247925 - hypothetical protein gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0203 YPK_0204 YPK_0204 YPK_0204 247918 248310 - hypothetical protein KEGG: ecv:APECO1_4036 hypothetical protein gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0204 YPK_0205 YPK_0205 YPK_0205 248303 248512 - hypothetical protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0205 YPK_0206 YPK_0206 YPK_0206 248512 249054 - conserved hypothetical protein KEGG: ypi:YpsIP31758_B0087 hypothetical protein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0206 YPK_0207 YPK_0207 YPK_0207 249044 249286 - hypothetical protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0207 YPK_0208 YPK_0208 YPK_0208 249283 249504 - hypothetical protein gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0208 YPK_0209 YPK_0209 YPK_0209 249501 250001 - hypothetical protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0209 YPK_0210 YPK_0210 YPK_0210 250001 250699 - conserved hypothetical protein KEGG: eca:ECA0552 hypothetical protein gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0210 YPK_0211 YPK_0211 YPK_0211 250782 250973 - hypothetical protein gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0211 YPK_0212 YPK_0212 YPK_0212 250975 251613 - conserved hypothetical protein KEGG: hdu:HD0097 hypothetical protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0212 YPK_0213 YPK_0213 YPK_0213 251603 251803 - hypothetical protein gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0213 YPK_0214 YPK_0214 YPK_0214 251810 252043 - hypothetical protein gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0214 YPK_0215 YPK_0215 YPK_0215 252062 252952 - transcriptional regulator%2C XRE family KEGG: nmc:NMC1048 putative phage transposase gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0215 YPK_0216 YPK_0216 YPK_0216 252995 255049 - Transposase-like Mu PFAM: Integrase catalytic region%3B Transposase-like Mu~KEGG: sfv:SFV_0328 putative phage transposase gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0216 YPK_0217 YPK_0217 YPK_0217 255051 255296 - putative transcriptional regulator%2C Nlp KEGG: plu:plu0944 hypothetical protein gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0217 YPK_0218 YPK_0218 YPK_0218 255478 256041 + hypothetical protein KEGG: plu:plu1095 hypothetical protein gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0218 YPK_0219 YPK_0219 YPK_0219 256387 258942 - penicillin-binding protein%2C 1A family TIGRFAM: penicillin-binding protein%2C 1A family~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase~KEGG: ypk:y3924 peptidoglycan synthetase%3B penicillin-binding protein 1A gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0219 YPK_0220 YPK_0220 YPK_0220 259062 259958 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3971 hypothetical protein gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0220 YPK_0221 YPK_0221 YPK_0221 259958 260563 + Fimbrial assembly family protein PFAM: Fimbrial assembly family protein~KEGG: ypp:YPDSF_0073 membrane protein gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0221 YPK_0222 YPK_0222 YPK_0222 260511 261137 + membrane protein KEGG: ypp:YPDSF_0074 membrane protein gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0222 YPK_0223 YPK_0223 YPK_0223 261103 261531 + membrane protein KEGG: ypp:YPDSF_0075 membrane protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0223 YPK_0224 YPK_0224 YPK_0224 261722 263104 + type IV pilus secretin PilQ TIGRFAM: type IV pilus secretin PilQ~PFAM: type II and III secretion system protein%3B NolW domain protein~KEGG: ypi:YpsIP31758_3967 protein transporter HofQ gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0224 YPK_0225 YPK_0225 YPK_0225 263453 263974 + Shikimate kinase PFAM: shikimate kinase~KEGG: ypi:YpsIP31758_3966 shikimate kinase gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0225 YPK_0226 YPK_0226 YPK_0226 264031 265119 + 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: ypi:YpsIP31758_3965 3-dehydroquinate synthase gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0226 YPK_0227 YPK_0227 YPK_0227 265373 266362 + Sporulation domain protein PFAM: Sporulation domain protein~KEGG: ypi:YpsIP31758_3964 putative DamX protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0227 YPK_0228 YPK_0228 YPK_0228 266446 267261 + DNA adenine methylase KEGG: ypi:YpsIP31758_3963 DNA adenine methylase~TIGRFAM: DNA adenine methylase~PFAM: D12 class N6 adenine-specific DNA methyltransferase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0228 YPK_0229 YPK_0229 YPK_0229 267564 268241 + Ribulose-phosphate 3-epimerase PFAM: ribulose-phosphate 3-epimerase~KEGG: ypi:YpsIP31758_3962 ribulose-phosphate 3-epimerase gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0229 YPK_0230 YPK_0230 YPK_0230 268234 268932 + phosphoglycolate phosphatase TIGRFAM: phosphoglycolate phosphatase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypi:YpsIP31758_3961 phosphoglycolate phosphatase%2C bacterial gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0230 YPK_0231 YPK_0231 YPK_0231 268934 269974 + tryptophanyl-tRNA synthetase KEGG: yps:YPTB3744 tryptophanyl-tRNA synthetase~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0231 YPK_0232 YPK_0232 YPK_0232 270092 271513 - uroporphyrin-III C-methyltransferase TIGRFAM: uroporphyrin-III C-methyltransferase%3B siroheme synthase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: ypi:YpsIP31758_3959 siroheme synthase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0232 YPK_0233 YPK_0233 YPK_0233 271576 272382 - formate/nitrite transporter PFAM: formate/nitrite transporter~KEGG: ypi:YpsIP31758_3958 formate/nitrite transporter gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0233 YPK_0234 YPK_0234 YPK_0234 272577 272903 - nitrite reductase (NAD(P)H)%2C small subunit TIGRFAM: nitrite reductase [NAD(P)H]%2C small subunit~KEGG: ypi:YpsIP31758_3957 nitrite reductase [NAD(P)H]%2C small subunit gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0234 YPK_0235 YPK_0235 YPK_0235 272900 275446 - nitrite reductase (NAD(P)H)%2C large subunit TIGRFAM: nitrite reductase [NAD(P)H]%2C large subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein%3B nitrite and sulphite reductase 4Fe-4S region%3B BFD domain protein [2Fe-2S]-binding domain protein~KEGG: ypi:YpsIP31758_3956 nitrite reductase [NAD(P)H]%2C large subunit gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0235 YPK_0236 YPK_0236 YPK_0236 275480 275593 - hypothetical protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0236 YPK_0237 YPK_0237 YPK_0237 275768 277066 + N-isopropylammelide isopropylaminohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: ypi:YpsIP31758_3955 cytosine deaminase gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0237 YPK_0238 YPK_0238 YPK_0238 277151 278335 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypp:YPDSF_0090 conserved integral membrane protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0238 YPK_0239 YPK_0239 YPK_0239 278821 280866 + TonB-dependent copper receptor TIGRFAM: TonB-dependent copper receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: yps:YPTB3737 putative iron siderophore receptor/tonB dependent transporter gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0239 YPK_0240 YPK_0240 YPK_0240 280963 281949 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_3952 sugar-binding transcriptional regulator%2C LacI family gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0240 YPK_0241 YPK_0241 YPK_0241 282178 283491 - glycoside hydrolase family 4 PFAM: glycoside hydrolase family 4~KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0241 YPK_0242 YPK_0242 YPK_0242 284007 284576 + peptidyl-prolyl cis-trans isomerase cyclophilin type PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: ypi:YpsIP31758_3950 peptidyl-prolyl cis-trans isomerase A gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0242 YPK_0243 YPK_0243 YPK_0243 284902 286443 + protein of unknown function DUF853 NPT hydrolase putative PFAM: protein of unknown function DUF853 NPT hydrolase putative~KEGG: yps:YPTB3733 hypothetical protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0243 YPK_0244 YPK_0244 YPK_0244 286686 287261 + glutamine amidotransferase of anthranilate synthase TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I~KEGG: ypi:YpsIP31758_3948 para-aminobenzoate synthase glutamine amidotransferase component II gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0244 YPK_0245 YPK_0245 YPK_0245 287394 288611 + succinylornithine transaminase family TIGRFAM: acetylornithine and succinylornithine aminotransferase%3B succinylornithine transaminase family~PFAM: aminotransferase class-III~KEGG: ypp:YPDSF_0098 hypothetical protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0245 YPK_0246 YPK_0246 YPK_0246 288750 288854 + hypothetical protein gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0246 YPK_0247 YPK_0247 YPK_0247 288837 290957 - integral membrane protein%2C YccS/YhfK family TIGRFAM: integral membrane protein%2C YccS/YhfK family~PFAM: protein of unknown function DUF893 YccS/YhfK~KEGG: yps:YPTB3730 possible putative efflux transporter (PET) family protein gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0247 YPK_0248 YPK_0248 YPK_0248 291043 291675 - transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~KEGG: yen:YE3955 cAMP-regulatory protein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0248 YPK_0249 YPK_0249 YPK_0249 292011 292418 + OsmC family protein PFAM: OsmC family protein~KEGG: yps:YPTB3728 putative redox protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0249 YPK_0250 YPK_0250 YPK_0250 292696 292833 + hypothetical protein gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0250 YPK_0251 YPK_0251 YPK_0251 292863 293342 + type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: plu:plu0404 hypothetical protein gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0251 YPK_0252 YPK_0252 YPK_0252 293418 294290 + conserved hypothetical protein KEGG: eca:ECA3675 hypothetical protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0252 YPK_0253 YPK_0253 YPK_0253 294250 294681 + protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: yps:YPTB3727 hypothetical protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0253 YPK_0254 YPK_0254 YPK_0254 294859 295728 - Phosphoribulokinase PFAM: phosphoribulokinase/uridine kinase~KEGG: ypm:YP_0177 phosphoribulokinase 1 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0254 YPK_0255 YPK_0255 YPK_0255 295877 296113 - protein of unknown function UPF0270 PFAM: protein of unknown function UPF0270~KEGG: ypi:YpsIP31758_3941 hypothetical protein gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0255 YPK_0256 YPK_0256 YPK_0256 296110 297090 - alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold~KEGG: ypi:YpsIP31758_3940 hydrolase%2C alpha/beta fold family gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0256 YPK_0257 YPK_0257 YPK_0257 297192 297794 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ypi:YpsIP31758_3939 translocator protein%2C LysE family gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0257 YPK_0258 YPK_0258 YPK_0258 297997 299058 + taurine ABC transporter%2C periplasmic binding protein KEGG: ypk:y3963 taurine-binding periplasmic protein of taurine ABC transport system~TIGRFAM: taurine ABC transporter%2C periplasmic binding protein~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SMART: extracellular solute-binding protein family 3 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0258 YPK_0259 YPK_0259 YPK_0259 299067 299834 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0182 putative taurine transport ATP-binding protein gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0259 YPK_0260 YPK_0260 YPK_0260 299831 300685 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_0183 putative taurine transport system permease protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0260 YPK_0261 YPK_0261 YPK_0261 300682 301530 + Taurine dioxygenase PFAM: Taurine catabolism dioxygenase TauD/TfdA~KEGG: ypi:YpsIP31758_3935 alpha-ketoglutarate-dependent taurine dioxygenase gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0261 YPK_0262 YPK_0262 YPK_0262 301543 302523 - glycosyl transferase family 9 PFAM: glycosyl transferase family 9~KEGG: ypi:YpsIP31758_3934 heptosyltransferase family protein gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0262 YPK_0263 YPK_0263 YPK_0263 302616 303641 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ypp:YPDSF_0113 glycosyl transferase gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0263 YPK_0264 YPK_0264 YPK_0264 303776 305698 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0187 ATPase components of ABC transporters with duplicated ATPase domains gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0264 YPK_0265 YPK_0265 YPK_0265 305949 306497 + NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)~KEGG: yps:YPTB3715 possible NAD(P)H oxidoreductase/ancillary protein to KefB gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0265 YPK_0266 YPK_0266 YPK_0266 306501 308309 + potassium efflux system protein TIGRFAM: potassium efflux system protein~PFAM: TrkA-N domain protein%3B sodium/hydrogen exchanger~KEGG: ypm:YP_0189 probable potassium-efflux system protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0266 YPK_0267 YPK_0267 YPK_0267 308325 308546 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypm:YP_0190 predicted nucleic-acid-binding protein containing a Zn-ribbon domain gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0267 YPK_0268 YPK_0268 YPK_0268 308641 309222 + peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: ypm:YP_0191 peptidyl-prolyl cis-trans isomerase gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0268 YPK_0269 YPK_0269 YPK_0269 309423 309641 - SlyX family protein PFAM: SlyX family protein~KEGG: ypi:YpsIP31758_3927 SlyX protein gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0269 YPK_0270 YPK_0270 YPK_0270 309956 310756 + Peptidylprolyl isomerase PFAM: FKBP-type peptidyl-prolyl isomerase domain protein%3B peptidylprolyl isomerase FKBP-type~KEGG: ypi:YpsIP31758_3926 peptidyl-prolyl cis-trans isomerase%2C FKBP-type gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0270 YPK_0271 YPK_0271 YPK_0271 311010 311732 + YheO domain protein PFAM: YheO domain protein~KEGG: ypm:YP_0195 putative DNA-binding protein gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0271 YPK_0272 YPK_0272 YPK_0272 311732 312127 + sulfur relay protein TusD/DsrE TIGRFAM: sulfur relay protein TusD/DsrE~PFAM: DsrE family protein~KEGG: ypi:YpsIP31758_3924 tRNA 2-thiouridine synthesizing sulfurtransferase TusD gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0272 YPK_0273 YPK_0273 YPK_0273 312127 312492 + sulfur relay protein TusC/DsrF TIGRFAM: sulfur relay protein TusC/DsrF~PFAM: DsrE family protein~KEGG: ypm:YP_0197 uncharacterized protein involved in the oxidation of intracellular sulfur gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0273 YPK_0274 YPK_0274 YPK_0274 312512 312799 + sulfur relay protein TusB/DsrH TIGRFAM: sulfur relay protein TusB/DsrH~PFAM: DsrH family protein~KEGG: ypi:YpsIP31758_3922 tRNA 2-thiouridine synthesizing protein B gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0274 YPK_0275 YPK_0275 YPK_0275 312937 313311 + ribosomal protein S12 TIGRFAM: ribosomal protein S12~PFAM: ribosomal protein S12/S23~KEGG: yen:YE3930 30S ribosomal protein S12 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0275 YPK_0276 YPK_0276 YPK_0276 313408 313878 + ribosomal protein S7 PFAM: ribosomal protein S7~KEGG: yen:YE3929 30S ribosomal protein S7 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0276 YPK_0277 YPK_0277 YPK_0277 313972 316080 + translation elongation factor G TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: elongation factor G domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV~KEGG: ypi:YpsIP31758_3919 translation elongation factor G gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0277 YPK_0278 YPK_0278 YPK_0278 316152 317336 + translation elongation factor Tu TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain protein%3B elongation factor Tu domain 2 protein~KEGG: ypm:YP_0202 elongation factor Tu gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0278 YPK_0279 YPK_0279 YPK_0279 317539 317997 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0279 YPK_0280 YPK_0280 YPK_0280 318185 318379 + BFD domain protein (2Fe-2S)-binding domain protein PFAM: BFD domain protein [2Fe-2S]-binding domain protein~KEGG: yps:YPTB3701 putative bacterioferritin-associated ferredoxin gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0280 YPK_0281 YPK_0281 YPK_0281 318458 318931 + bacterioferritin TIGRFAM: bacterioferritin~PFAM: Ferritin Dps family protein~KEGG: ypp:YPDSF_0131 bacterioferritin gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0281 YPK_0282 YPK_0282 YPK_0282 319345 319656 + ribosomal protein S10 PFAM: ribosomal protein S10~KEGG: asu:Asuc_0458 ribosomal protein S10 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0282 YPK_0283 YPK_0283 YPK_0283 319689 320318 + ribosomal protein L3 PFAM: ribosomal protein L3~KEGG: ypi:YpsIP31758_3915 ribosomal protein L3 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0283 YPK_0284 YPK_0284 YPK_0284 320335 320940 + ribosomal protein L4/L1e PFAM: ribosomal protein L4/L1e~KEGG: ypi:YpsIP31758_3914 ribosomal protein L4 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0284 YPK_0285 YPK_0285 YPK_0285 320937 321239 + Ribosomal protein L25/L23 PFAM: Ribosomal protein L25/L23~KEGG: ypi:YpsIP31758_3913 ribosomal protein L23 gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0285 YPK_0286 YPK_0286 YPK_0286 321256 322080 + ribosomal protein L2 PFAM: ribosomal protein L2~KEGG: ypm:YP_0210 50S ribosomal protein l2 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0286 YPK_0287 YPK_0287 YPK_0287 322095 322373 + ribosomal protein S19 TIGRFAM: ribosomal protein S19~PFAM: ribosomal protein S19/S15~KEGG: ypm:YP_0211 30S ribosomal protein S19 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0287 YPK_0288 YPK_0288 YPK_0288 322388 322720 + ribosomal protein L22 TIGRFAM: ribosomal protein L22~PFAM: ribosomal protein L22/L17~KEGG: ypm:YP_0212 50S ribosomal protein L22 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0288 YPK_0289 YPK_0289 YPK_0289 322738 323436 + ribosomal protein S3 KEGG: yen:YE3917 30S ribosomal protein S3~TIGRFAM: ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B KH type 2 domain protein%3B Ribosomal protein S3 domain~SMART: KH domain protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0289 YPK_0290 YPK_0290 YPK_0290 323449 323859 + ribosomal protein L16 PFAM: ribosomal protein L16~KEGG: yen:YE3916 50S ribosomal protein L16 gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0290 YPK_0291 YPK_0291 YPK_0291 323859 324050 + ribosomal protein L29 PFAM: ribosomal protein L29~KEGG: ypi:YpsIP31758_3907 ribosomal protein L29 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0291 YPK_0292 YPK_0292 YPK_0292 324050 324304 + ribosomal protein S17 PFAM: ribosomal protein S17~KEGG: yen:YE3914 30S ribosomal protein S17 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0292 YPK_0293 YPK_0293 YPK_0293 324485 324856 + ribosomal protein L14 TIGRFAM: ribosomal protein L14~PFAM: ribosomal protein L14b/L23e~KEGG: yen:YE3913 50S ribosomal protein L14 gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0293 YPK_0294 YPK_0294 YPK_0294 324867 325181 + ribosomal protein L24 TIGRFAM: ribosomal protein L24~PFAM: KOW domain protein~KEGG: ypm:YP_0218 50S ribosomal protein L24 gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0294 YPK_0295 YPK_0295 YPK_0295 325196 325735 + ribosomal protein L5 PFAM: ribosomal protein L5~KEGG: ypi:YpsIP31758_3902 ribosomal protein L5 gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0295 YPK_0296 YPK_0296 YPK_0296 325749 326054 + ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: ypi:YpsIP31758_3901 ribosomal protein S14 gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0296 YPK_0297 YPK_0297 YPK_0297 326088 326480 + ribosomal protein S8 PFAM: ribosomal protein S8~KEGG: ypi:YpsIP31758_3900 ribosomal protein S8 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0297 YPK_0298 YPK_0298 YPK_0298 326495 327028 + ribosomal protein L6 PFAM: ribosomal protein L6~KEGG: ypi:YpsIP31758_3899 ribosomal protein L6 gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0298 YPK_0299 YPK_0299 YPK_0299 327038 327391 + ribosomal protein L18 TIGRFAM: ribosomal protein L18~PFAM: ribosomal protein L18P/L5E~KEGG: ypi:YpsIP31758_3898 ribosomal protein L18 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0299 YPK_0300 YPK_0300 YPK_0300 327406 327909 + ribosomal protein S5 TIGRFAM: ribosomal protein S5~PFAM: ribosomal protein S5 domain protein%3B Ribosomal protein S5~KEGG: ypi:YpsIP31758_3897 ribosomal protein S5 gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0300 YPK_0301 YPK_0301 YPK_0301 327912 328091 + ribosomal protein L30 PFAM: ribosomal protein L30~KEGG: yen:YE3905 50S ribosomal protein L30 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0301 YPK_0302 YPK_0302 YPK_0302 328095 328529 + ribosomal protein L15 PFAM: ribosomal protein L15~KEGG: ypi:YpsIP31758_3895 ribosomal protein L15 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0302 YPK_0303 YPK_0303 YPK_0303 328537 329868 + preprotein translocase%2C SecY subunit TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: SecY protein~KEGG: ypm:YP_0227 preprotein translocase SecY subunit gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0303 YPK_0304 YPK_0304 YPK_0304 329902 330018 + ribosomal protein L36 PFAM: ribosomal protein L36~KEGG: sgl:SG2257 50S ribosomal protein L36 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0304 YPK_0305 YPK_0305 YPK_0305 330166 330522 + ribosomal protein S13 PFAM: ribosomal protein S13~KEGG: ypi:YpsIP31758_3893 ribosomal protein S13 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0305 YPK_0306 YPK_0306 YPK_0306 330539 330928 + ribosomal protein S11 PFAM: ribosomal protein S11~KEGG: ypi:YpsIP31758_3892 ribosomal protein S11 gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0306 YPK_0307 YPK_0307 YPK_0307 330959 331579 + ribosomal protein S4 PFAM: ribosomal protein S4%3B RNA-binding S4 domain protein~KEGG: ypm:YP_0231 30S ribosomal protein S4 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0307 YPK_0308 YPK_0308 YPK_0308 331605 332594 + DNA-directed RNA polymerase%2C alpha subunit KEGG: ypi:YpsIP31758_3890 DNA-directed RNA polymerase%2C alpha subunit~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase alpha subunit domain protein%3B RNA polymerase dimerisation%3B RNA polymerase insert~SMART: RNA polymerase RpoA/D/Rpb3-type gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0308 YPK_0309 YPK_0309 YPK_0309 332635 333024 + ribosomal protein L17 PFAM: ribosomal protein L17~KEGG: ypm:YP_0233 50S ribosomal protein L17 gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0309 YPK_0310 YPK_0310 YPK_0310 333471 333896 + transcriptional regulator%2C MerR family TIGRFAM: Zn(II)-responsive transcriptional regulator~PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding~KEGG: ypm:YP_0234 zinc-responsive transcriptional regulator gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0310 YPK_0311 YPK_0311 YPK_0311 333984 334184 + protein of unknown function DUF331 PFAM: protein of unknown function DUF331~KEGG: ypi:YpsIP31758_3887 hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0311 YPK_0312 YPK_0312 YPK_0312 334294 334698 - large conductance mechanosensitive channel protein TIGRFAM: large conductance mechanosensitive channel protein~PFAM: large-conductance mechanosensitive channel~KEGG: ypm:YP_0236 mechanosensitive ion channel gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0312 YPK_0313 YPK_0313 YPK_0313 334846 336222 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B NADP oxidoreductase coenzyme F420-dependent%3B TrkA-C domain protein~KEGG: ypm:YP_0237 trk system potassium uptake protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0313 YPK_0314 YPK_0314 YPK_0314 336278 337567 - sun protein TIGRFAM: sun protein~PFAM: Fmu (Sun) domain protein%3B NusB/RsmB/TIM44~KEGG: ypi:YpsIP31758_3884 ribosomal RNA small subunit methyltransferase B gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0314 YPK_0315 YPK_0315 YPK_0315 337661 338608 - methionyl-tRNA formyltransferase TIGRFAM: methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein~KEGG: ypi:YpsIP31758_3883 methionyl-tRNA formyltransferase gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0315 YPK_0316 YPK_0316 YPK_0316 338633 339145 - peptide deformylase KEGG: ypm:YP_0240 polypeptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0316 YPK_0317 YPK_0317 YPK_0317 339280 340401 + DNA protecting protein DprA TIGRFAM: DNA protecting protein DprA~PFAM: SMF family protein~KEGG: yps:YPTB3664 DNA processing protein gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0317 YPK_0318 YPK_0318 YPK_0318 340373 340846 + protein of unknown function DUF494 PFAM: protein of unknown function DUF494~KEGG: ypi:YpsIP31758_3880 smg protein gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0318 YPK_0319 YPK_0319 YPK_0319 340887 341426 + DNA topoisomerase type IA zn finger domain protein PFAM: DNA topoisomerase type IA zn finger domain protein~KEGG: ypi:YpsIP31758_3879 topoisomerase DNA binding C4 zinc finger domain protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0319 YPK_0320 YPK_0320 YPK_0320 341428 342000 + SUA5/yciO/yrdC domain PFAM: SUA5/yciO/yrdC domain~KEGG: ypi:YpsIP31758_3878 ribosomal modification protein RimN gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0320 YPK_0321 YPK_0321 YPK_0321 342009 342830 + shikimate 5-dehydrogenase TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate/quinate 5-dehydrogenase%3B Shikimate dehydrogenase substrate binding domain protein~KEGG: ypm:YP_0245 shikimate 5-dehydrogenase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0321 YPK_0322 YPK_0322 YPK_0322 342885 343427 - transferase hexapeptide repeat containing protein PFAM: transferase hexapeptide repeat containing protein~KEGG: yps:YPTB3659 putative transferase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0322 YPK_0323 YPK_0323 YPK_0323 343731 343850 + hypothetical protein gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0323 YPK_0326 YPK_0326 YPK_0326 349642 350679 + UDP-N-acetylenolpyruvoylglucosamine reductase KEGG: ypi:YpsIP31758_3872 UDP-N-acetylenolpyruvoylglucosamine reductase~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: FAD linked oxidase domain protein%3B UDP-N-acetylenolpyruvoylglucosamine reductase domain protein gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0326 YPK_0327 YPK_0327 YPK_0327 350676 351635 + bifunctional BirA%2C biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase KEGG: ypm:YP_3289 bifunctional protein BirA~TIGRFAM: biotin--acetyl-CoA-carboxylase ligase%3B biotin operon repressor~PFAM: biotin protein ligase domain protein%3B biotin/lipoate A/B protein ligase%3B Helix-turn-helix type 11 domain protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0327 YPK_0328 YPK_0328 YPK_0328 351670 352620 - pantothenate kinase KEGG: ypi:YpsIP31758_3870 pantothenate kinase~TIGRFAM: pantothenate kinase~PFAM: phosphoribulokinase/uridine kinase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0328 YPK_0329 YPK_0329 YPK_0329 352831 353382 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: yps:YPTB0275 putative acetyltransferase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0329 YPK_0330 YPK_0330 YPK_0330 353606 353740 - hypothetical protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0330 YPK_0332 YPK_0332 YPK_0332 354371 355555 + translation elongation factor Tu TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain protein%3B elongation factor Tu domain 2 protein~KEGG: ypm:YP_3117 elongation factor Tu gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0332 YPK_0333 YPK_0333 YPK_0333 355806 356189 + preprotein translocase%2C SecE subunit TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: protein secE/sec61-gamma protein~KEGG: ypi:YpsIP31758_3866 preprotein translocase%2C SecE subunit gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0333 YPK_0334 YPK_0334 YPK_0334 356191 356736 + NusG antitermination factor TIGRFAM: transcription termination/antitermination factor NusG~PFAM: KOW domain protein%3B NGN domain protein~KEGG: yen:YE0280 transcription antitermination protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0334 YPK_0335 YPK_0335 YPK_0335 356927 357355 + ribosomal protein L11 PFAM: ribosomal protein L11~KEGG: ypi:YpsIP31758_3864 ribosomal protein L11 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0335 YPK_0336 YPK_0336 YPK_0336 357359 358063 + ribosomal protein L1 PFAM: ribosomal protein L1~KEGG: ypm:YP_3113 50S ribosomal protein L1 gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0336 YPK_0337 YPK_0337 YPK_0337 358428 358925 + ribosomal protein L10 PFAM: ribosomal protein L10~KEGG: ypm:YP_3112 50S ribosomal protein L10 gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0337 YPK_0338 YPK_0338 YPK_0338 358992 359360 + ribosomal protein L7/L12 TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12~KEGG: ypi:YpsIP31758_3861 ribosomal protein L7/L12 gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0338 YPK_0339 YPK_0339 YPK_0339 359506 359643 - hypothetical protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0339 YPK_0340 YPK_0340 YPK_0340 359703 363731 + DNA-directed RNA polymerase%2C beta subunit TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 7%3B RNA polymerase Rpb2 domain 2%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2 domain 3~KEGG: ypi:YpsIP31758_3860 DNA-directed RNA polymerase%2C beta subunit gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0340 YPK_0341 YPK_0341 YPK_0341 363860 368080 + DNA-directed RNA polymerase%2C beta' subunit KEGG: ypp:YPDSF_3744 DNA-directed RNA polymerase beta' chain~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 1%3B RNA polymerase Rpb1 domain 5%3B RNA polymerase Rpb1 domain 4~SMART: RNA polymerase I subunit A domain protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0341 YPK_0342 YPK_0342 YPK_0342 368387 369517 - thiazole biosynthesis protein ThiH TIGRFAM: thiazole biosynthesis protein ThiH~PFAM: Radical SAM domain protein%3B biotin and thiamin synthesis associated~KEGG: ypm:YP_3107 thiamine biosynthesis protein ThiH gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0342 YPK_0343 YPK_0343 YPK_0343 369510 370325 - thiazole biosynthesis family protein PFAM: thiazole biosynthesis family protein~KEGG: ypm:YP_3106 thiamine biosynthesis protein ThiG gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0343 YPK_0344 YPK_0344 YPK_0344 370327 370542 - thiamine biosynthesis protein ThiS TIGRFAM: thiamine biosynthesis protein ThiS~PFAM: thiamineS protein~KEGG: ypm:YP_3105 sulfur transfer protein involved in thiamine biosynthesis gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0344 YPK_0345 YPK_0345 YPK_0345 370539 371336 - UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein~KEGG: ypi:YpsIP31758_3855 adenylyltransferase ThiF gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0345 YPK_0346 YPK_0346 YPK_0346 371326 372000 - thiamine-phosphate pyrophosphorylase KEGG: ypm:YP_3103 thiamine-phosphate pyrophosphorylase~TIGRFAM: thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0346 YPK_0347 YPK_0347 YPK_0347 371987 374032 - thiamine biosynthesis protein ThiC PFAM: thiamine biosynthesis protein ThiC~KEGG: ypm:YP_3102 thiamine biosynthesis protein ThiC gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0347 YPK_0348 YPK_0348 YPK_0348 374407 374916 - regulator of RpoD%2C Rsd/AlgQ PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ~KEGG: ypi:YpsIP31758_3852 regulator of sigma D gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0348 YPK_0349 YPK_0349 YPK_0349 375013 375795 + NAD(+) diphosphatase PFAM: NUDIX hydrolase%3B NADH pyrophosphatase-like %3B Zinc ribbon NADH pyrophosphatase~KEGG: ypi:YpsIP31758_3851 hydrolase%2C NUDIX family gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0349 YPK_0350 YPK_0350 YPK_0350 375888 376673 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3850 hypothetical protein gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0350 YPK_0351 YPK_0351 YPK_0351 376792 377859 + uroporphyrinogen decarboxylase KEGG: ypm:YP_3097 uroporphyrinogen decarboxylase~TIGRFAM: uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0351 YPK_0352 YPK_0352 YPK_0352 377889 378629 + Deoxyribonuclease V PFAM: Endonuclease V~KEGG: ypm:YP_3096 endonuclease V (deoxyinosine 3'endoduclease) gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0352 YPK_0353 YPK_0353 YPK_0353 378675 379265 + protein of unknown function DUF416 PFAM: protein of unknown function DUF416~KEGG: ypi:YpsIP31758_3847 hypothetical protein gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0353 YPK_0354 YPK_0354 YPK_0354 379454 379729 + histone family protein DNA-binding protein PFAM: histone family protein DNA-binding protein~KEGG: ypm:YP_3094 DNA-binding protein HU-alpha gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0354 YPK_0355 YPK_0355 YPK_0355 379779 380432 + protein of unknown function DUF1481 PFAM: protein of unknown function DUF1481~KEGG: ypi:YpsIP31758_3845 putative lipoprotein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0355 YPK_0356 YPK_0356 YPK_0356 380599 381885 - phosphoribosylamine--glycine ligase KEGG: yps:YPTB0299 phosphoribosylamine--glycine ligase~TIGRFAM: phosphoribosylamine--glycine ligase~PFAM: phosphoribosylglycinamide synthetase%3B protein of unknown function DUF201 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0356 YPK_0357 YPK_0357 YPK_0357 381945 383534 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase KEGG: yps:YPTB0300 phosphoribosylaminoimidazolecarboxamide formyltransferase~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: MGS domain protein%3B AICARFT/IMPCHase bienzyme formylation region gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0357 YPK_0358 YPK_0358 YPK_0358 383945 384064 + hypothetical protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0358 YPK_0362 YPK_0362 YPK_0362 389982 390254 - hypothetical protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0362 YPK_0363 YPK_0363 YPK_0363 390322 391251 + Homoserine O-succinyltransferase PFAM: homoserine O-succinyltransferase~KEGG: ypi:YpsIP31758_0292 homoserine O-succinyltransferase gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0363 YPK_0364 YPK_0364 YPK_0364 391672 393270 + malate synthase A KEGG: ypi:YpsIP31758_0294 malate synthase A~TIGRFAM: malate synthase A~PFAM: malate synthase gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0364 YPK_0365 YPK_0365 YPK_0365 393317 394624 + isocitrate lyase TIGRFAM: isocitrate lyase~PFAM: isocitrate lyase and phosphorylmutase~KEGG: ypi:YpsIP31758_0295 isocitrate lyase gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0365 YPK_0366 YPK_0366 YPK_0366 394769 396607 + (Isocitrate dehydrogenase (NADP(+))) kinase PFAM: Isocitrate dehydrogenase kinasephosphatase~KEGG: yps:YPTB3655 bifunctional isocitrate dehydrogenase kinase/phosphatase protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0366 YPK_0367 YPK_0367 YPK_0367 396727 397569 - transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~KEGG: ypm:YP_3085 transcriptional regulator gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0367 YPK_0368 YPK_0368 YPK_0368 397784 401479 + methionine synthase TIGRFAM: methionine synthase~PFAM: dihydropteroate synthase DHPS%3B homocysteine S-methyltransferase%3B Methionine synthase B12-binding module cap domain protein%3B Vitamin B12 dependent methionine synthase activation region%3B cobalamin B12-binding domain protein~KEGG: yps:YPTB3653 B12-dependent methionine synthase gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0368 YPK_0369 YPK_0369 YPK_0369 401575 402360 - hemolysin KEGG: yps:YPTB3652 hemolysin gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0369 YPK_0370 YPK_0370 YPK_0370 402371 404834 - Hemolysin activator HlyB domain protein pseudogene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0370 YPK_0372 YPK_0372 YPK_0372 405295 406680 - aspartate kinase KEGG: ypi:YpsIP31758_0301 asparate kinase%2C monofunctional class~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0372 YPK_0373 YPK_0373 YPK_0373 407050 408696 + Glucose-6-phosphate isomerase PFAM: phosphoglucose isomerase (PGI)~KEGG: ypi:YpsIP31758_0302 glucose-6-phosphate isomerase gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0373 YPK_0374 YPK_0374 YPK_0374 408693 408809 - hypothetical protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0374 YPK_0375 YPK_0375 YPK_0375 408831 409238 + phosphate-starvation-inducible E PFAM: phosphate-starvation-inducible E~KEGG: ypi:YpsIP31758_0303 protein PsiE gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0375 YPK_0376 YPK_0376 YPK_0376 409381 410271 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0304 maltose ABC transporter%2C permease protein gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0376 YPK_0377 YPK_0377 YPK_0377 410285 411862 - Fructose-bisphosphate aldolase PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0305 maltose ABC transporter%2C permease protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0377 YPK_0378 YPK_0378 YPK_0378 412049 413260 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_0306 maltose ABC transporter%2C periplasmic maltose-binding protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0378 YPK_0379 YPK_0379 YPK_0379 413738 414100 + glycosidase KEGG: ypm:YP_3075 glycosidases gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0379 YPK_0380 YPK_0380 YPK_0380 414088 415197 + ABC transporter related PFAM: ABC transporter related%3B TOBE domain protein%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0308 maltose ABC transporter%2C ATP-binding protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0380 YPK_0381 YPK_0381 YPK_0381 415268 416539 + porin LamB type PFAM: porin LamB type~KEGG: ypi:YpsIP31758_0309 maltoporin LamB gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0381 YPK_0382 YPK_0382 YPK_0382 416780 417691 + Maltose operon periplasmic PFAM: Maltose operon periplasmic~KEGG: ypp:YPDSF_0190 maltose operon periplasmic protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0382 YPK_0383 YPK_0383 YPK_0383 418030 418440 + conserved hypothetical protein KEGG: ypp:YPDSF_0191 hypothetical protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0383 YPK_0384 YPK_0384 YPK_0384 418431 418649 + hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0384 YPK_0385 YPK_0385 YPK_0385 418592 419110 - type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_0312 hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0385 YPK_0386 YPK_0386 YPK_0386 419634 420131 + type VI secretion protein%2C VC_A0107 family TIGRFAM: type VI secretion protein%2C VC_A0107 family~PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_0313 hypothetical protein gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0386 YPK_0387 YPK_0387 YPK_0387 420199 421680 + type VI secretion protein%2C EvpB/VC_A0108 family TIGRFAM: type VI secretion protein%2C EvpB/VC_A0108 family~PFAM: protein of unknown function DUF877~KEGG: ypi:YpsIP31758_0314 hypothetical protein gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0387 YPK_0388 YPK_0388 YPK_0388 421687 422127 + type VI secretion system lysozyme-related protein TIGRFAM: type VI secretion system lysozyme-related protein~PFAM: GPW/gp25 family protein~KEGG: ypi:YpsIP31758_0315 hypothetical protein gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0388 YPK_0389 YPK_0389 YPK_0389 422127 423947 + type VI secretion protein%2C VC_A0110 family TIGRFAM: type VI secretion protein%2C VC_A0110 family~PFAM: protein of unknown function DUF879~KEGG: ypi:YpsIP31758_0316 hypothetical protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0389 YPK_0390 YPK_0390 YPK_0390 423911 424981 + type VI secretion protein%2C VC_A0111 family TIGRFAM: type VI secretion protein%2C VC_A0111 family~PFAM: protein of unknown function DUF1305~KEGG: yps:YPTB3634 hypothetical protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0390 YPK_0391 YPK_0391 YPK_0391 425107 426423 + FHA domain containing protein TIGRFAM: type VI secretion system FHA domain protein~PFAM: Forkhead-associated protein~KEGG: ypi:YpsIP31758_0318 FHA domain protein gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0391 YPK_0392 YPK_0392 YPK_0392 426423 426968 + putative lipoprotein KEGG: ypi:YpsIP31758_0319 putative lipoprotein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0392 YPK_0393 YPK_0393 YPK_0393 426971 428317 + type VI secretion protein%2C VC_A0114 family TIGRFAM: type VI secretion protein%2C VC_A0114 family~PFAM: protein of unknown function DUF876~KEGG: ypi:YpsIP31758_0320 hypothetical protein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0393 YPK_0394 YPK_0394 YPK_0394 428317 429084 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0321 hypothetical protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0394 YPK_0395 YPK_0395 YPK_0395 429095 431698 + type VI secretion ATPase%2C ClpV1 family KEGG: ypm:YP_3951 Clp ATPase~TIGRFAM: type VI secretion ATPase%2C ClpV1 family~PFAM: ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0395 YPK_0396 YPK_0396 YPK_0396 431695 432492 + transcriptional regulator%2C Fis family PFAM: helix-turn-helix Fis-type~KEGG: ypi:YpsIP31758_0323 transcriptional regulator%2C fis family gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0396 YPK_0397 YPK_0397 YPK_0397 432489 433175 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0324 hypothetical protein gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0397 YPK_0398 YPK_0398 YPK_0398 433181 434569 + type VI secretion-associated protein%2C VC_A0119 family TIGRFAM: type VI secretion-associated protein%2C VC_A0119 family~PFAM: ImpA domain protein~KEGG: ypk:y0272 hypothetical protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0398 YPK_0399 YPK_0399 YPK_0399 434601 438134 + type VI secretion protein IcmF TIGRFAM: type VI secretion protein IcmF~PFAM: ImcF domain protein%3B protein of unknown function DUF1215~KEGG: ypi:YpsIP31758_0326 putative lipoprotein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0399 YPK_0400 YPK_0400 YPK_0400 438259 439566 + ImpA domain protein PFAM: ImpA domain protein~KEGG: ypi:YpsIP31758_0327 ImpA domain protein gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0400 YPK_0401 YPK_0401 YPK_0401 439588 441810 + type VI secretion system Vgr family protein TIGRFAM: type VI secretion system Vgr family protein~PFAM: Rhs element Vgr protein~KEGG: ypi:YpsIP31758_0328 rhs element Vgr protein gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0401 YPK_0402 YPK_0402 YPK_0402 441816 442274 + Domain of unknown function DUF1795 PFAM: Domain of unknown function DUF1795~KEGG: ypm:YP_3943 hypothetical protein gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0402 YPK_0403 YPK_0403 YPK_0403 442267 446439 + YD repeat protein TIGRFAM: YD repeat protein~PFAM: RHS protein%3B YD repeat-containing protein%3B PAAR repeat-containing protein~KEGG: yps:YPTB3621 hypothetical protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0403 YPK_0404 YPK_0404 YPK_0404 446442 446861 + hypothetical protein KEGG: bpu:BPUM_1759 hypothetical protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0404 YPK_0405 YPK_0405 YPK_0405 447145 447390 + hypothetical protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0405 YPK_0406 YPK_0406 YPK_0406 447390 447878 + putative cytoplasmic protein KEGG: stm:STM0294 putative cytoplasmic protein gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0406 YPK_0407 YPK_0407 YPK_0407 447924 448286 - Domain of unknown function DUF1813%2C HSP20-like protein PFAM: Domain of unknown function DUF1813 HSP20-like~KEGG: yps:YPTB3619 hypothetical protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0407 YPK_0408 YPK_0408 YPK_0408 448319 448594 + hypothetical protein KEGG: ypi:YpsIP31758_2860 hypothetical protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0408 YPK_0409 YPK_0409 YPK_0409 448579 448686 + hypothetical protein gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0409 YPK_0410 YPK_0410 YPK_0410 448646 452215 + YD repeat protein TIGRFAM: YD repeat protein~PFAM: RHS protein%3B YD repeat-containing protein~KEGG: yps:YPTB3615 hypothetical protein gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0410 YPK_0411 YPK_0411 YPK_0411 452212 452493 + conserved hypothetical protein KEGG: yps:YPTB3614 hypothetical protein gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0411 YPK_0412 YPK_0412 YPK_0412 452695 452916 + putative rhs accessory genetic element KEGG: yps:YPTB3613 putative rhs accessory genetic element gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0412 YPK_0413 YPK_0413 YPK_0413 453206 454105 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: ypi:YpsIP31758_0344 AP endonuclease%2C family 2 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0413 YPK_0414 YPK_0414 YPK_0414 454102 455232 - oxidoreductase domain protein PFAM: oxidoreductase domain protein~KEGG: ypi:YpsIP31758_0345 oxidoreductase%2C NAD-binding gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0414 YPK_0415 YPK_0415 YPK_0415 455502 456368 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B AraC protein arabinose-binding/dimerisation~KEGG: yps:YPTB3610 putative AraC-family transcriptional regulatory protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0415 YPK_0416 YPK_0416 YPK_0416 456528 457031 - RbsD or FucU transport PFAM: RbsD or FucU transport~KEGG: yps:YPTB3609 putative carbohydrate transport protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0416 YPK_0417 YPK_0417 YPK_0417 457037 457966 - PfkB domain protein PFAM: PfkB domain protein~KEGG: yps:YPTB3608 probable carbohydrate kinase gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0417 YPK_0418 YPK_0418 YPK_0418 458147 458848 - deoxyribose-phosphate aldolase KEGG: ypi:YpsIP31758_0350 putative deoxyribose-phosphate aldolase~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0418 YPK_0419 YPK_0419 YPK_0419 459319 459899 + NADPH-dependent FMN reductase pseudogene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0419 YPK_0421 YPK_0421 YPK_0421 459914 461035 + aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein KEGG: ype:YPO3624 putative aliphatic sulfonates binding protein~TIGRFAM: aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SMART: extracellular solute-binding protein family 3 gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0421 YPK_0422 YPK_0422 YPK_0422 461054 462202 + Alkanesulfonate monooxygenase PFAM: luciferase family protein~KEGG: yps:YPTB3604 alkanesulfonate monooxygenase gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0422 YPK_0423 YPK_0423 YPK_0423 462214 463008 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_3921 putative aliphatic sulfonates transport permease protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0423 YPK_0424 YPK_0424 YPK_0424 463005 463820 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0356 putative ABC aliphatic sulfonates transporter%2C ATP-binding subunit gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0424 YPK_0425 YPK_0425 YPK_0425 464439 464642 - RelB antitoxin PFAM: RelB antitoxin~KEGG: ypm:YP_3919 putative DNA-damage-inducible protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0425 YPK_0426 YPK_0426 YPK_0426 465096 466451 + Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease%3B sulphate transporter~KEGG: ypm:YP_3918 putative xanthine/uracil permease gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0426 YPK_0427 YPK_0427 YPK_0427 466708 467916 - transposase mutator type PFAM: transposase mutator type~KEGG: yps:YPTB3311 putative transposase gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0427 YPK_0428 YPK_0428 YPK_0428 468170 469819 + Na+/H+ antiporter TIGRFAM: Na+/H+ antiporter~PFAM: sodium/hydrogen exchanger~KEGG: ypm:YP_3917 putative putative Na(+)/H(+) exchanger protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0428 YPK_0429 YPK_0429 YPK_0429 470036 471223 - conserved hypothetical protein KEGG: yps:YPTB3598 hypothetical protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0429 YPK_0430 YPK_0430 YPK_0430 471375 472295 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase~PFAM: lipid A biosynthesis acyltransferase~KEGG: ypm:YP_3915 lipid A biosynthesis lauroyl acyltransferase gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0430 YPK_0431 YPK_0431 YPK_0431 473102 474091 + carbohydrate uptake (CUT2 family) ABC transporter%2C periplasmic carbohydrate-binding protein KEGG: ypi:YpsIP31758_0364 carbohydrate uptake (CUT2 family) ABC transporter%2C periplasmic carbohydrate-binding protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0431 YPK_0432 YPK_0432 YPK_0432 474295 475791 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_3913 ABC transporter ATP binding protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0432 YPK_0433 YPK_0433 YPK_0433 475784 476773 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypm:YP_3912 putative branched-chain amino acid transport system%2C permease component gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0433 YPK_0434 YPK_0434 YPK_0434 476775 477728 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_0367 carbohydrate uptake (CUT2 family) ABC transporter%2C permease protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0434 YPK_0435 YPK_0435 YPK_0435 477747 479384 + FGGY-family pentulose kinase TIGRFAM: FGGY-family pentulose kinase~PFAM: carbohydrate kinase FGGY~KEGG: ypm:YP_3910 putative carbohydrate kinase gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0435 YPK_0436 YPK_0436 YPK_0436 479381 479986 + sugar isomerase (SIS) PFAM: sugar isomerase (SIS)~KEGG: ypi:YpsIP31758_0369 SIS domain protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0436 YPK_0437 YPK_0437 YPK_0437 480085 480939 - Glutathione S-transferase domain PFAM: Glutathione S-transferase domain~KEGG: yps:YPTB3590 putative glutathione S-transferase gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0437 YPK_0438 YPK_0438 YPK_0438 481190 482536 + conserved hypothetical protein KEGG: yps:YPTB3589 hypothetical protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0438 YPK_0439 YPK_0439 YPK_0439 482582 482698 - hypothetical protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0439 YPK_0440 YPK_0440 YPK_0440 482688 483863 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0372 hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0440 YPK_0441 YPK_0441 YPK_0441 484021 484173 + hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0441 YPK_0442 YPK_0442 YPK_0442 484200 484412 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypi:YpsIP31758_0376 cold shock DNA-binding domain protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0442 YPK_0443 YPK_0443 YPK_0443 484672 484884 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypi:YpsIP31758_0376 cold shock DNA-binding domain protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0443 YPK_0444 YPK_0444 YPK_0444 485144 485356 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypp:YPDSF_0251 major cold shock protein CspA1 gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0444 YPK_0445 YPK_0445 YPK_0445 485890 486357 - 17 kDa surface antigen PFAM: 17 kDa surface antigen~KEGG: ypi:YpsIP31758_0378 outer membrane lipoprotein PcP gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0445 YPK_0446 YPK_0446 YPK_0446 486833 487645 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: ypi:YpsIP31758_0379 metallo-beta-lactamase family protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0446 YPK_0447 YPK_0447 YPK_0447 487710 488600 + 3-hydroxyisobutyrate dehydrogenase PFAM: 6-phosphogluconate dehydrogenase NAD-binding~KEGG: ypi:YpsIP31758_0380 6-phosphogluconate dehydrogenase NAD-binding domain protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0447 YPK_0448 YPK_0448 YPK_0448 488792 489187 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: yps:YPTB3581 putative gamma carboxymuconolactone decarboxylase gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0448 YPK_0449 YPK_0449 YPK_0449 489341 490705 + major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0382 transporter%2C major facilitator family gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0449 YPK_0450 YPK_0450 YPK_0450 490795 491469 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B GntR domain protein~KEGG: ypi:YpsIP31758_0383 transcriptional regulator%2C GntR family gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0450 YPK_0451 YPK_0451 YPK_0451 491535 492011 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0384 hypothetical protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0451 YPK_0452 YPK_0452 YPK_0452 492765 493061 - transcriptional regulator%2C Fis family PFAM: helix-turn-helix Fis-type~KEGG: yen:YE3817 DNA-binding protein fis gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0452 YPK_0453 YPK_0453 YPK_0453 493086 494051 - TIM-barrel protein%2C nifR3 family TIGRFAM: TIM-barrel protein%2C nifR3 family~PFAM: dihydrouridine synthase DuS%3B dihydroorotate dehydrogenase~KEGG: ypi:YpsIP31758_0386 dihydrouridine synthase gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0453 YPK_0454 YPK_0454 YPK_0454 494640 495521 - ribosomal protein L11 methyltransferase TIGRFAM: ribosomal protein L11 methyltransferase~PFAM: putative RNA methylase%3B methyltransferase small%3B ribosomal L11 methyltransferase%3B Methyltransferase type 12~KEGG: ypm:YP_3891 ribosomal protein L11 methyltransferase gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0454 YPK_0455 YPK_0455 YPK_0455 495597 497051 - sodium/pantothenate symporter TIGRFAM: SSS sodium solute transporter superfamily%3B sodium/pantothenate symporter~PFAM: Na+/solute symporter~KEGG: ypm:YP_3890 sodium/pantothenate symporter gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0455 YPK_0456 YPK_0456 YPK_0456 497041 497283 - protein of unknown function DUF997 PFAM: protein of unknown function DUF997~KEGG: ypi:YpsIP31758_0390 hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0456 YPK_0457 YPK_0457 YPK_0457 498343 498519 + hypothetical protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0457 YPK_0458 YPK_0458 YPK_0458 498765 500114 - acetyl-CoA carboxylase%2C biotin carboxylase TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: phosphoribosylglycinamide synthetase%3B Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B RimK domain protein ATP-grasp~KEGG: yps:YPTB3572 biotin carboxylase gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0458 YPK_0459 YPK_0459 YPK_0459 500126 500590 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: biotin/lipoyl attachment domain-containing protein~KEGG: yps:YPTB3571 biotin carboxyl carrier protein of acetyl-CoA carboxylase gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0459 YPK_0460 YPK_0460 YPK_0460 500748 501200 - 3-dehydroquinate dehydratase%2C type II KEGG: ypm:YP_3886 putative class II dehydroquinase~TIGRFAM: 3-dehydroquinate dehydratase%2C type II~PFAM: dehydroquinase class II gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0460 YPK_0461 YPK_0461 YPK_0461 501462 502082 - Ferric reductase domain protein transmembrane component domain PFAM: Ferric reductase domain protein transmembrane component domain~KEGG: ypm:YP_3885 hypothetical protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0461 YPK_0462 YPK_0462 YPK_0462 502082 503182 - oxidoreductase molybdopterin binding PFAM: oxidoreductase molybdopterin binding~KEGG: yps:YPTB3568 hypothetical protein gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0462 YPK_0463 YPK_0463 YPK_0463 503405 504382 - quinone oxidoreductase%2C YhdH/YhfP family TIGRFAM: quinone oxidoreductase%2C YhdH/YhfP family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ypm:YP_3883 probable zinc-binding dehydrogenase gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0463 YPK_0464 YPK_0464 YPK_0464 504783 506699 + diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B EAL domain protein~KEGG: ypi:YpsIP31758_0397 putative diguanylate cyclase/cyclic diguanylate phosphodiesterase protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0464 YPK_0465 YPK_0465 YPK_0465 507036 508079 + cell shape determining protein%2C MreB/Mrl family TIGRFAM: cell shape determining protein%2C MreB/Mrl family~PFAM: cell shape determining protein MreB/Mrl~KEGG: ypm:YP_3881 rod shape-determining protein MreB gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0465 YPK_0466 YPK_0466 YPK_0466 508283 509278 + rod shape-determining protein MreC TIGRFAM: rod shape-determining protein MreC~PFAM: Rod shape-determining protein MreC~KEGG: ypi:YpsIP31758_0399 rod shape-determining protein MreC gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0466 YPK_0467 YPK_0467 YPK_0467 509275 509763 + rod shape-determining protein MreD TIGRFAM: rod shape-determining protein MreD~PFAM: Rod shape-determining protein MreD~KEGG: ypm:YP_3879 rod shape-determining protein MreD gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0467 YPK_0468 YPK_0468 YPK_0468 509777 510370 + maf protein TIGRFAM: maf protein~PFAM: Maf family protein~KEGG: ypi:YpsIP31758_0401 septum formation protein Maf gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0468 YPK_0469 YPK_0469 YPK_0469 510360 511829 + ribonuclease%2C Rne/Rng family TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: RNA binding S1 domain protein~KEGG: ypi:YpsIP31758_0402 ribonuclease G gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0469 YPK_0470 YPK_0470 YPK_0470 511923 515846 + conserved hypothetical protein KEGG: yps:YPTB3560 hypothetical protein gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0470 YPK_0471 YPK_0471 YPK_0471 515843 516712 + Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: ypm:YP_3875 putative carbon-nitrogen hydrolase gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0471 YPK_0472 YPK_0472 YPK_0472 516724 518169 + peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: ypi:YpsIP31758_0405 TldD protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0472 YPK_0473 YPK_0473 YPK_0473 518371 521229 - YD repeat protein TIGRFAM: YD repeat protein~KEGG: yps:YPTB3557 putative insecticidal toxin gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0473 YPK_0474 YPK_0474 YPK_0474 521283 521456 - conserved hypothetical protein KEGG: ypm:YP_3870 hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0474 YPK_0475 YPK_0475 YPK_0475 521443 521802 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0411 hypothetical protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0475 YPK_0476 YPK_0476 YPK_0476 521799 522200 - putative phage-related protein KEGG: yps:YPTB3555 putative phage-related protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0476 YPK_0477 YPK_0477 YPK_0477 522213 522515 - putative phage-related protein KEGG: ypi:YpsIP31758_0413 putative phage-related protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0477 YPK_0478 YPK_0478 YPK_0478 522649 527118 - virulence plasmid 65kDa B protein PFAM: virulence plasmid 65kDa B protein~KEGG: yps:YPTB3553 insecticidal toxin complex gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0478 YPK_0479 YPK_0479 YPK_0479 527175 530768 - toxin subunit KEGG: ypp:YPDSF_0286 toxin subunit gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0479 YPK_0480 YPK_0480 YPK_0480 530809 533310 - virulence plasmid 28.1 kDa A protein PFAM: virulence plasmid 28.1 kDa A protein~KEGG: ypp:YPDSF_0287 insecticidal toxin gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0480 YPK_0481 YPK_0481 YPK_0481 533546 534358 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR~KEGG: ypp:YPDSF_0289 LysR-family transcriptional regulatory protein gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0481 YPK_0482 YPK_0482 YPK_0482 534673 535584 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypk:y0180 transcriptional regulator LYSR-type gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0482 YPK_0483 YPK_0483 YPK_0483 535887 536090 + protein of unknown function DUF1656 PFAM: protein of unknown function DUF1656~KEGG: ypi:YpsIP31758_0419 hypothetical protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0483 YPK_0484 YPK_0484 YPK_0484 536098 537033 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: ypm:YP_3858 putative HlyD family secretion protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0484 YPK_0485 YPK_0485 YPK_0485 537035 538990 + Fusaric acid resistance protein conserved region PFAM: Fusaric acid resistance protein conserved region~KEGG: ypi:YpsIP31758_0421 p-hydroxybenzoic acid efflux pump subunit AaeB gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0485 YPK_0486 YPK_0486 YPK_0486 539257 540726 + succinic semialdehyde dehydrogenase TIGRFAM: succinic semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase_~KEGG: ypi:YpsIP31758_0422 succinate-semialdehyde dehydrogenase (NADP+) gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0486 YPK_0487 YPK_0487 YPK_0487 540921 541394 + guanine-specific ribonuclease N1 and T1 PFAM: guanine-specific ribonuclease N1 and T1~KEGG: ypm:YP_3855 putative ribonuclease gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0487 YPK_0488 YPK_0488 YPK_0488 541399 541680 + Barstar (barnase inhibitor) PFAM: Barstar (barnase inhibitor)~KEGG: ypi:YpsIP31758_0424 barstar gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0488 YPK_0489 YPK_0489 YPK_0489 541776 542324 - protein of unknown function DUF615 PFAM: protein of unknown function DUF615~KEGG: ypi:YpsIP31758_0425 hypothetical protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0489 YPK_0490 YPK_0490 YPK_0490 542505 543845 + peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: ypi:YpsIP31758_0426 PmbA protein gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0490 YPK_0491 YPK_0491 YPK_0491 544005 544613 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0427 hypothetical protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0491 YPK_0492 YPK_0492 YPK_0492 544821 545207 + cytochrome b562 PFAM: cytochrome b562~KEGG: ypi:YpsIP31758_0428 cytochrome b562 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0492 YPK_0493 YPK_0493 YPK_0493 545439 545849 - GreA/GreB family elongation factor KEGG: ypm:YP_3849 regulator of nucleoside diphosphate kinase gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0493 YPK_0494 YPK_0494 YPK_0494 546202 547863 - alpha%2Calpha-phosphotrehalase KEGG: ypm:YP_3848 putative trehalose-6-phosphate hydrolase~TIGRFAM: alpha%2Calpha-phosphotrehalase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0494 YPK_0495 YPK_0495 YPK_0495 547958 549373 - PTS system%2C trehalose-specific IIBC subunit TIGRFAM: PTS system%2C trehalose-specific IIBC subunit%3B PTS system%2C glucose-like IIB subunint~PFAM: phosphotransferase system PTS EIIB protein%3B phosphotransferase system EIIC~KEGG: yps:YPTB3536 PTS system%2C trehalose-specific IIBC component gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0495 YPK_0496 YPK_0496 YPK_0496 549784 550737 - transcriptional regulator%2C LacI family TIGRFAM: trehalose operon repressor~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_3846 trehalose operon repressor gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0496 YPK_0497 YPK_0497 YPK_0497 550971 551447 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0433 hypothetical protein gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0497 YPK_0498 YPK_0498 YPK_0498 551746 552132 - endoribonuclease L-PSP TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~KEGG: ypi:YpsIP31758_0434 putative endoribonuclease L-PSP gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0498 YPK_0499 YPK_0499 YPK_0499 552270 552737 - aspartate carbamoyltransferase%2C regulatory subunit TIGRFAM: aspartate carbamoyltransferase%2C regulatory subunit~PFAM: aspartate transcarbamylase regulatory subunit~KEGG: yps:YPTB3532 aspartate carbamoyltransferase regulatory chain gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0499 YPK_0500 YPK_0500 YPK_0500 552746 553681 - aspartate carbamoyltransferase KEGG: ypi:YpsIP31758_0436 aspartate carbamoyltransferase~TIGRFAM: aspartate carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0500 YPK_0501 YPK_0501 YPK_0501 554019 554291 - Phosphotransferase system%2C phosphocarrier protein HPr TIGRFAM: phosphocarrier%2C HPr family~PFAM: phosphocarrier HPr protein~KEGG: ypi:YpsIP31758_0437 phosphocarrier protein%2C HPr family gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0501 YPK_0502 YPK_0502 YPK_0502 554288 555142 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_0438 P-loop ATPase protein family gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0502 YPK_0503 YPK_0503 YPK_0503 555448 555930 - PTS IIA-like nitrogen-regulatory protein PtsN TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN~PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~KEGG: ypi:YpsIP31758_0439 nitrogen regulatory IIA protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0503 YPK_0504 YPK_0504 YPK_0504 556049 556336 - sigma 54 modulation protein/ribosomal protein S30EA TIGRFAM: ribosomal subunit interface protein~PFAM: sigma 54 modulation protein/ribosomal protein S30EA~KEGG: ypi:YpsIP31758_0440 ribosomal subunit interface protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0504 YPK_0505 YPK_0505 YPK_0505 556360 557793 - RNA polymerase%2C sigma 54 subunit%2C RpoN TIGRFAM: RNA polymerase sigma-54 factor%2C RpoN~PFAM: sigma-54 factor%3B sigma-54 factor core-binding region%3B sigma-54 DNA-binding domain protein~KEGG: ypi:YpsIP31758_0441 RNA polymerase sigma-54 factor gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0505 YPK_0506 YPK_0506 YPK_0506 557855 558580 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_3836 probable ABC transporter ATP-binding protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0506 YPK_0507 YPK_0507 YPK_0507 558587 559132 - lipopolysaccharide transport periplasmic protein LptA TIGRFAM: lipopolysaccharide transport periplasmic protein LptA~PFAM: OstA family protein~KEGG: ypi:YpsIP31758_0443 cell envelope biogenesis protein YhbN gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0507 YPK_0508 YPK_0508 YPK_0508 559116 559679 - protein of unknown function DUF1239 PFAM: protein of unknown function DUF1239~KEGG: ypi:YpsIP31758_0444 hypothetical protein gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0508 YPK_0509 YPK_0509 YPK_0509 559676 560239 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family TIGRFAM: hydrolase%2C HAD-superfamily%2C subfamily IIIA%3B 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family~KEGG: ypm:YP_3833 Uncharacterized proteins of HAD superfamily%2C CMP-Neu5Ac homologs gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0509 YPK_0510 YPK_0510 YPK_0510 560789 561862 - KpsF/GutQ family protein KEGG: ypm:YP_3832 putative isomerase~TIGRFAM: KpsF/GutQ family protein~PFAM: CBS domain containing protein%3B sugar isomerase (SIS) gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0510 YPK_0511 YPK_0511 YPK_0511 561886 562860 - Na+/Ca+ antiporter%2C CaCA family TIGRFAM: Na+/Ca+ antiporter%2C CaCA family~PFAM: sodium/calcium exchanger membrane region~KEGG: ypm:YP_3831 putative sodium/calcium exchanger protein gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0511 YPK_0512 YPK_0512 YPK_0512 563125 563943 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_3830 putative ABC transporter ATP-binding protein gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0512 YPK_0513 YPK_0513 YPK_0513 564161 564943 + protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: ypm:YP_3829 putative membrane protein gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0513 YPK_0514 YPK_0514 YPK_0514 564948 565505 + Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: ypi:YpsIP31758_0450 mce family protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0514 YPK_0515 YPK_0515 YPK_0515 565518 566141 + toluene tolerance family protein PFAM: toluene tolerance family protein~KEGG: ypm:YP_3827 hypothetical protein gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0515 YPK_0516 YPK_0516 YPK_0516 566177 566479 + putative anti-sigma B factor antagonist KEGG: ypm:YP_3826 putative anti-sigma B factor antagonist gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0516 YPK_0517 YPK_0517 YPK_0517 566617 566880 + BolA family protein PFAM: BolA family protein~KEGG: yps:YPTB3514 putative BolA/YrbA family protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0517 YPK_0518 YPK_0518 YPK_0518 567034 568296 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~KEGG: ypm:YP_3824 UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0518 YPK_0519 YPK_0519 YPK_0519 568477 569628 - periplasmic serine protease DegS KEGG: ypp:YPDSF_0329 protease~TIGRFAM: periplasmic serine protease DegS~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0519 YPK_0520 YPK_0520 YPK_0520 569655 571028 - protease Do KEGG: ypm:YP_3821 protease~TIGRFAM: protease Do~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0520 YPK_0521 YPK_0521 YPK_0521 571299 571703 - protein of unknown function DUF1043 PFAM: protein of unknown function DUF1043~KEGG: ypi:YpsIP31758_0457 hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0521 YPK_0522 YPK_0522 YPK_0522 571848 571970 + hypothetical protein gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0522 YPK_0523 YPK_0523 YPK_0523 571927 573054 + AFG1-family ATPase PFAM: AFG1-family ATPase~KEGG: ypm:YP_3819 predicted ATPase gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0523 YPK_0524 YPK_0524 YPK_0524 573368 573796 + ribosomal protein L13 PFAM: ribosomal protein L13~KEGG: ypi:YpsIP31758_0459 ribosomal protein L13 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0524 YPK_0525 YPK_0525 YPK_0525 573811 574203 + ribosomal protein S9 PFAM: ribosomal protein S9~KEGG: ypi:YpsIP31758_0461 ribosomal protein S9 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0525 YPK_0526 YPK_0526 YPK_0526 574577 575218 + Glutathione S-transferase domain PFAM: Glutathione S-transferase domain~KEGG: yps:YPTB3506 putative stringent starvation protein A gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0526 YPK_0527 YPK_0527 YPK_0527 575224 575739 + Stringent starvation protein B PFAM: Stringent starvation protein B~KEGG: yps:YPTB3505 putative stringent starvation protein B gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0527 YPK_0528 YPK_0528 YPK_0528 575892 576377 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0464 hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0528 YPK_0529 YPK_0529 YPK_0529 576977 578395 - glutamate synthase%2C small subunit TIGRFAM: glutamate synthase%2C small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ypm:YP_3812 glutamate synthase [NADPH] small chain gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0529 YPK_0530 YPK_0530 YPK_0530 578405 582862 - Glutamate synthase (ferredoxin) PFAM: glutamine amidotransferase class-II%3B glutamate synthase alpha subunit domain protein%3B ferredoxin-dependent glutamate synthase%3B glutamate synthase~KEGG: yps:YPTB3502 glutamate synthase [NADPH] large chain precursor gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0530 YPK_0531 YPK_0531 YPK_0531 583619 584608 + conserved hypothetical radical SAM protein KEGG: ypm:YP_3810 uncharacterized Fe-S oxidoreductases~TIGRFAM: conserved hypothetical radical SAM protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0531 YPK_0532 YPK_0532 YPK_0532 584643 584861 + hypothetical protein gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0532 YPK_0533 YPK_0533 YPK_0533 584892 587228 + multi-sensor hybrid histidine kinase KEGG: ypi:YpsIP31758_0469 putative aerobic respiration control sensor protein ArcB~TIGRFAM: PAS sensor protein~PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B Hpt domain protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0533 YPK_0534 YPK_0534 YPK_0534 587470 588123 + ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: ypi:YpsIP31758_0470 enhancing lycopene biosynthesis protein 2 gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0534 YPK_0535 YPK_0535 YPK_0535 588120 588845 + monofunctional biosynthetic peptidoglycan transglycosylase TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase~PFAM: glycosyl transferase family 51~KEGG: yps:YPTB3497 monofunctional biosynthetic peptidoglycan transglycosylase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0535 YPK_0536 YPK_0536 YPK_0536 589052 589627 - transport-associated PFAM: transport-associated~SMART: Transport-associated and nodulation region~KEGG: ypi:YpsIP31758_0472 putative YraP protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0536 YPK_0537 YPK_0537 YPK_0537 589638 590228 - phosphoheptose isomerase TIGRFAM: phosphoheptose isomerase~KEGG: ypi:YpsIP31758_0473 phosphoheptose isomerase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0537 YPK_0538 YPK_0538 YPK_0538 590499 590852 - protein of unknown function UPF0102 PFAM: protein of unknown function UPF0102~KEGG: ypm:YP_3803 predicted endonuclease distantly related to archaeal Holliday junction resolvase gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0538 YPK_0539 YPK_0539 YPK_0539 590951 592924 - LppC family lipoprotein PFAM: LppC family lipoprotein~KEGG: ypi:YpsIP31758_0475 putative LppC lipoprotein gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0539 YPK_0540 YPK_0540 YPK_0540 592987 593886 + Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: ypm:YP_3801 putative tetrapyrrole methylase gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0540 YPK_0541 YPK_0541 YPK_0541 594484 595188 - Pirin domain protein PFAM: Pirin domain protein~KEGG: ypi:YpsIP31758_0477 YhhW family protein gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0541 YPK_0542 YPK_0542 YPK_0542 595450 596343 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_3798 LysR-family transcriptional regulatory protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0542 YPK_0543 YPK_0543 YPK_0543 596474 597460 - putative glutathione S-transferase KEGG: yps:YPTB3489 possible glutathione S-transferase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0543 YPK_0544 YPK_0544 YPK_0544 597546 597941 - DoxX family protein PFAM: DoxX family protein~KEGG: ypm:YP_2887 hypothetical protein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0544 YPK_0545 YPK_0545 YPK_0545 598245 598529 - conserved hypothetical protein KEGG: ypm:YP_2888 hypothetical protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0545 YPK_0546 YPK_0546 YPK_0546 598526 598921 - conserved hypothetical protein KEGG: ypm:YP_2889 hypothetical protein gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0546 YPK_0547 YPK_0547 YPK_0547 598924 599229 - protein of unknown function DUF883 ElaB PFAM: protein of unknown function DUF883 ElaB~KEGG: ypi:YpsIP31758_0483 hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0547 YPK_0548 YPK_0548 YPK_0548 599384 599764 - protein of unknown function DUF1090 PFAM: protein of unknown function DUF1090~KEGG: ypi:YpsIP31758_0485 hypothetical protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0548 YPK_0549 YPK_0549 YPK_0549 599990 600379 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0486 hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0549 YPK_0550 YPK_0550 YPK_0550 600376 601074 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ypi:YpsIP31758_0487 hypothetical protein gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0550 YPK_0551 YPK_0551 YPK_0551 601351 601884 - putative lipoprotein KEGG: yps:YPTB3481 putative lipoprotein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0551 YPK_0552 YPK_0552 YPK_0552 602133 602927 - regulatory protein GntR HTH PFAM: regulatory protein GntR HTH%3B GntR domain protein~KEGG: ypi:YpsIP31758_0489 transcriptional regulator%2C GntR family gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0552 YPK_0553 YPK_0553 YPK_0553 603190 604494 - d-galactonate transporter TIGRFAM: d-galactonate transporter~PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_2897 ExuT transport protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0553 YPK_0554 YPK_0554 YPK_0554 605239 606648 + Glucuronate isomerase PFAM: Glucuronate isomerase~KEGG: ypi:YpsIP31758_0491 glucuronate isomerase gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0554 YPK_0555 YPK_0555 YPK_0555 606847 608298 + Mannitol dehydrogenase domain PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~KEGG: ypp:YPDSF_0367 altronate oxidoreductase gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0555 YPK_0556 YPK_0556 YPK_0556 608309 609799 + Altronate dehydratase PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein%3B SAF domain protein~KEGG: ypi:YpsIP31758_0493 altronate dehydratase gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0556 YPK_0557 YPK_0557 YPK_0557 609952 610482 + conserved hypothetical protein KEGG: ypm:YP_2902 hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0557 YPK_0558 YPK_0558 YPK_0558 610549 611868 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: ypm:YP_2904 Na/dicarboxylate symporter gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0558 YPK_0559 YPK_0559 YPK_0559 612340 613335 - oxidoreductase domain protein PFAM: oxidoreductase domain protein~KEGG: yps:YPTB3473 possible MocA-family oxidoreductase gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0559 YPK_0560 YPK_0560 YPK_0560 613538 614047 - protein of unknown function DUF45 PFAM: protein of unknown function DUF45~KEGG: ypi:YpsIP31758_0498 hypothetical protein gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0560 YPK_0561 YPK_0561 YPK_0561 614303 617296 - outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Pertactin%3B Autotransporter beta- domain protein~KEGG: ypp:YPDSF_0374 autotransporter protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0561 YPK_0562 YPK_0562 YPK_0562 617771 618958 + rRNA (guanine-N(2)-)-methyltransferase PFAM: methyltransferase small~KEGG: ypi:YpsIP31758_0500 methyltransferase family protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0562 YPK_0563 YPK_0563 YPK_0563 619074 621095 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ypp:YPDSF_0376 2%2C4-dienoyl-CoA reductase gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0563 YPK_0564 YPK_0564 YPK_0564 621308 621877 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0502 hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0564 YPK_0565 YPK_0565 YPK_0565 622245 623744 - putative kinase protein KEGG: yps:YPTB3467 putative kinase protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0565 YPK_0566 YPK_0566 YPK_0566 623776 625524 - conserved hypothetical protein KEGG: yps:YPTB3466 hypothetical protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0566 YPK_0567 YPK_0567 YPK_0567 625524 626564 - von Willebrand factor type A PFAM: von Willebrand factor type A~KEGG: ypi:YpsIP31758_0505 putative tellurium resistance protein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0567 YPK_0568 YPK_0568 YPK_0568 626666 627367 - von Willebrand factor type A PFAM: von Willebrand factor type A~KEGG: yps:YPTB3464 putative TerY-like tellurite resistance protein gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0568 YPK_0569 YPK_0569 YPK_0569 627306 627947 - stress protein PFAM: stress protein~KEGG: ypi:YpsIP31758_0507 tellurium resistance protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0569 YPK_0570 YPK_0570 YPK_0570 627980 628618 - von Willebrand factor type A PFAM: von Willebrand factor type A~KEGG: ypi:YpsIP31758_0508 putative tellurium resistance protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0570 YPK_0571 YPK_0571 YPK_0571 629333 631021 + Polypeptide-transport-associated domain protein ShlB-type PFAM: Hemolysin activator HlyB domain protein%3B Polypeptide-transport-associated domain protein ShlB-type~KEGG: ypp:YPDSF_0385 hemolysin activator protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0571 YPK_0572 YPK_0572 YPK_0572 631066 633042 + filamentous haemagglutinin family outer membrane protein TIGRFAM: filamentous haemagglutinin family outer membrane protein%3B adhesin HecA family~PFAM: Haemagluttinin repeat-containing protein%3B filamentous haemagglutinin domain protein~KEGG: ypi:YpsIP31758_0510 adhesin/haemagluttinin repeat protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0572 YPK_0573 YPK_0573 YPK_0573 633011 633367 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0517 hypothetical protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0573 YPK_0574 YPK_0574 YPK_0574 633374 633679 + hypothetical protein KEGG: spe:Spro_4401 hypothetical protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0574 YPK_0575 YPK_0575 YPK_0575 633782 637015 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0514 hypothetical protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0575 YPK_0576 YPK_0576 YPK_0576 637017 637550 + protein of unknown function DUF1436 PFAM: protein of unknown function DUF1436~KEGG: plu:plu3061 hypothetical protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0576 YPK_0577 YPK_0577 YPK_0577 637676 639475 + putative adhesin KEGG: ypm:YP_2919 putative adhesin gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0577 YPK_0578 YPK_0578 YPK_0578 639472 639705 + conserved hypothetical protein KEGG: ypm:YP_2920 hypothetical protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0578 YPK_0579 YPK_0579 YPK_0579 639977 640198 + conserved hypothetical protein KEGG: ypp:YPDSF_0388 hypothetical protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0579 YPK_0580 YPK_0580 YPK_0580 640158 640292 + hypothetical protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0580 YPK_0581 YPK_0581 YPK_0581 640294 640710 + conserved hypothetical protein KEGG: ypm:YP_2922 hypothetical protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0581 YPK_0582 YPK_0582 YPK_0582 640743 641540 + putative adhesin/hemolysin KEGG: yps:YPTB3460 possible adhesin/hemolysin gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0582 YPK_0583 YPK_0583 YPK_0583 641999 644284 - outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Autotransporter beta- domain protein~KEGG: yps:YPTB3449 putative autotransporter protein gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0583 YPK_0584 YPK_0584 YPK_0584 644344 645339 - putative exported protein KEGG: yps:YPTB3448 putative exported protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0584 YPK_0585 YPK_0585 YPK_0585 645441 646820 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0524 hypothetical protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0585 YPK_0586 YPK_0586 YPK_0586 647146 648261 + ABC transporter related PFAM: ABC transporter related%3B TOBE domain protein%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypm:YP_2927 putative transporter ATP-binding protein gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0586 YPK_0587 YPK_0587 YPK_0587 648344 651697 + conserved hypothetical protein KEGG: yps:YPTB3445 hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0587 YPK_0588 YPK_0588 YPK_0588 651806 652792 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_0527 sugar-binding transcriptional regulator%2C LacI family gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0588 YPK_0589 YPK_0589 YPK_0589 652869 654113 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypm:YP_2930 putative sugar binding protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0589 YPK_0590 YPK_0590 YPK_0590 654167 655048 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0529 sugar ABC transporter%2C permease protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0590 YPK_0591 YPK_0591 YPK_0591 655048 655866 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0530 sugar ABC transporter%2C permease protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0591 YPK_0592 YPK_0592 YPK_0592 655866 656378 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0531 hypothetical protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0592 YPK_0593 YPK_0593 YPK_0593 656429 658612 + glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: yps:YPTB3439 putative glycosyl hydrolase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0593 YPK_0594 YPK_0594 YPK_0594 658676 660202 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: yps:YPTB3438 possible outer membrane factor (OMF) family efflux porin gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0594 YPK_0595 YPK_0595 YPK_0595 660207 662108 - Fusaric acid resistance protein conserved region PFAM: Fusaric acid resistance protein conserved region~KEGG: ypi:YpsIP31758_0534 fusaric acid resistance domain protein gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0595 YPK_0596 YPK_0596 YPK_0596 662092 663141 - secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: ypi:YpsIP31758_0535 auxiliary transport protein%2C membrane fusion protein family gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0596 YPK_0597 YPK_0597 YPK_0597 663151 663486 - conserved hypothetical protein KEGG: yps:YPTB3435 hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0597 YPK_0598 YPK_0598 YPK_0598 663483 663683 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0537 hypothetical protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0598 YPK_0599 YPK_0599 YPK_0599 664449 665681 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: yps:YPTB3432 putative aminotransferase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0599 YPK_0600 YPK_0600 YPK_0600 665674 667125 + Na+/H+ antiporter NhaC PFAM: Citrate transporter%3B Na+/H+ antiporter NhaC~KEGG: ypn:YPN_0486 membrane protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0600 YPK_0601 YPK_0601 YPK_0601 667138 667575 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0540 hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0601 YPK_0602 YPK_0602 YPK_0602 667709 668341 + YheO domain protein PFAM: YheO domain protein~KEGG: ypi:YpsIP31758_0541 hypothetical protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0602 YPK_0603 YPK_0603 YPK_0603 668352 668732 + endoribonuclease L-PSP TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~KEGG: yps:YPTB3428 putative translational inhibitor protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0603 YPK_0604 YPK_0604 YPK_0604 669017 669421 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: ypm:YP_2945 putative translational inhibitor protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0604 YPK_0605 YPK_0605 YPK_0605 669636 669938 - Putative mono-oxygenase ydhR PFAM: Putative mono-oxygenase ydhR~KEGG: ypi:YpsIP31758_0544 putative monooxygenase%2C YdhR gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0605 YPK_0606 YPK_0606 YPK_0606 670198 670914 - putative protein-disulfide isomerase KEGG: yps:YPTB3425 putative protein-disulfide isomerase gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0606 YPK_0607 YPK_0607 YPK_0607 671076 672008 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_2948 LysR-family regulatory protein gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0607 YPK_0608 YPK_0608 YPK_0608 672399 673013 + filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: ypi:YpsIP31758_0548 Fic family protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0608 YPK_0609 YPK_0609 YPK_0609 673010 673168 - conserved hypothetical protein KEGG: ypp:YPDSF_0421 hypothetical protein gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0609 YPK_0610 YPK_0610 YPK_0610 673347 674525 + HNH endonuclease PFAM: HNH endonuclease~KEGG: ypi:YpsIP31758_0549 HNH endonuclease domain protein gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0610 YPK_0611 YPK_0611 YPK_0611 674534 675064 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0550 hypothetical protein gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0611 YPK_0612 YPK_0612 YPK_0612 675078 675551 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0551 hypothetical protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0612 YPK_0613 YPK_0613 YPK_0613 675604 676206 + putative phage terminase%2C small subunit KEGG: yps:YPTB3419 probable phage terminase%2C small subunit gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0613 YPK_0614 YPK_0614 YPK_0614 676659 678089 + integrase family protein PFAM: integrase family protein~KEGG: asa:ASA_3457 phage integrase gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0614 YPK_0615 YPK_0615 YPK_0615 678089 678817 + hypothetical protein gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0615 YPK_0616 YPK_0616 YPK_0616 678961 679158 + conserved hypothetical protein KEGG: eca:ECA0667 hypothetical protein gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0616 YPK_0617 YPK_0617 YPK_0617 679173 679976 + AntA/AntB antirepressor domain protein PFAM: AntA/AntB antirepressor domain protein~KEGG: ypi:YpsIP31758_0049 hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0617 YPK_0618 YPK_0618 YPK_0618 679966 680598 + hypothetical protein KEGG: ecc:c1487 hypothetical protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0618 YPK_0619 YPK_0619 YPK_0619 680644 681051 + hypothetical protein KEGG: spe:Spro_3883 hypothetical protein gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0619 YPK_0620 YPK_0620 YPK_0620 681044 681418 + hypothetical protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0620 YPK_0621 YPK_0621 YPK_0621 681411 681605 + hypothetical protein gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0621 YPK_0622 YPK_0622 YPK_0622 681605 683038 + phage/plasmid primase%2C P4 family TIGRFAM: phage/plasmid primase%2C P4 family~PFAM: D5 protein%3B primase P4~KEGG: ssn:SSON_0872 bacteriophage P4 DNA primase gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0622 YPK_0623 YPK_0623 YPK_0623 683417 684871 + hypothetical protein KEGG: ypi:YpsIP31758_0047 hypothetical protein gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0623 YPK_0624 YPK_0624 YPK_0624 684871 685314 + conserved hypothetical protein KEGG: ecv:APECO1_3699 hypothetical protein gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0624 YPK_0625 YPK_0625 YPK_0625 685397 685945 - hypothetical protein gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0625 YPK_0626 YPK_0626 YPK_0626 686112 686288 + hypothetical protein gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0626 YPK_0627 YPK_0627 YPK_0627 686292 686642 + hypothetical protein KEGG: plu:plu4369 hypothetical protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0627 YPK_0628 YPK_0628 YPK_0628 686639 687436 + hypothetical protein gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0628 YPK_0629 YPK_0629 YPK_0629 687458 687979 + hypothetical protein gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0629 YPK_0630 YPK_0630 YPK_0630 688315 688899 + hypothetical protein KEGG: ecx:EcHS_A2095 hypothetical protein gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0630 YPK_0631 YPK_0631 YPK_0631 689126 689434 + hypothetical protein gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0631 YPK_0632 YPK_0632 YPK_0632 689529 689768 - putative excisionase KEGG: eci:UTI89_C1458 putative excisionase gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0632 YPK_0633 YPK_0633 YPK_0633 690045 690734 + hypothetical protein gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0633 YPK_0634 YPK_0634 YPK_0634 691156 692994 - RNA polymerase%2C sigma 70 subunit%2C RpoD TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 1.1 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein%3B sigma-70 non-essential domain protein%3B sigma-70 region 1.2~KEGG: ypi:YpsIP31758_0553 RNA polymerase sigma factor RpoD gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0634 YPK_0635 YPK_0635 YPK_0635 693152 694900 - DNA primase KEGG: ypi:YpsIP31758_0554 DNA primase~TIGRFAM: DNA primase~PFAM: zinc finger CHC2-family protein%3B TOPRIM domain protein%3B DNA primase DnaG DnaB-binding%3B DNA primase catalytic core domain~SMART: Toprim sub domain protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0635 YPK_0636 YPK_0636 YPK_0636 695036 695251 - ribosomal protein S21 PFAM: ribosomal protein S21~KEGG: spe:Spro_4298 ribosomal protein S21 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0636 YPK_0637 YPK_0637 YPK_0637 695657 696670 + metalloendopeptidase%2C glycoprotease family KEGG: ypm:YP_2961 putative glycoprotease~TIGRFAM: metalloendopeptidase%2C glycoprotease family~PFAM: peptidase M22 glycoprotease gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0637 YPK_0638 YPK_0638 YPK_0638 696861 697511 - protein of unknown function DUF205 PFAM: protein of unknown function DUF205~KEGG: ypm:YP_2962 hypothetical protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0638 YPK_0639 YPK_0639 YPK_0639 697619 697978 + dihydroneopterin aldolase TIGRFAM: dihydroneopterin aldolase~KEGG: ypk:y3531 dihydroneopterin aldolase gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0639 YPK_0640 YPK_0640 YPK_0640 698252 699070 + undecaprenol kinase KEGG: ypm:YP_2964 undecaprenyl-diphosphatase~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0640 YPK_0641 YPK_0641 YPK_0641 699306 700544 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~KEGG: ypi:YpsIP31758_0560 multifunctional CCA protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0641 YPK_0642 YPK_0642 YPK_0642 700704 701324 - SH3 domain protein SMART: SH3 domain protein~KEGG: ypi:YpsIP31758_0561 hypothetical protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0642 YPK_0643 YPK_0643 YPK_0643 701628 702935 + adenylate cyclase PFAM: adenylate cyclase~KEGG: ypm:YP_2967 hypothetical protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0643 YPK_0644 YPK_0644 YPK_0644 703107 705962 + (Glutamate--ammonia-ligase) adenylyltransferase PFAM: glutamate-ammonia ligase adenylyltransferase~KEGG: ypm:YP_2968 adenylylating enzyme for glutamine synthetase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0644 YPK_0645 YPK_0645 YPK_0645 706097 707527 + rfaE bifunctional protein TIGRFAM: cytidyltransferase-related domain protein%3B rfaE bifunctional protein~PFAM: cytidylyltransferase%3B PfkB domain protein~KEGG: ypi:YpsIP31758_0564 bifunctional protein HldE gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0645 YPK_0646 YPK_0646 YPK_0646 707564 708814 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypm:YP_2970 putative permease gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0646 YPK_0647 YPK_0647 YPK_0647 709139 709420 - protein of unknown function DUF526 PFAM: protein of unknown function DUF526~KEGG: ypi:YpsIP31758_0566 hypothetical protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0647 YPK_0648 YPK_0648 YPK_0648 709456 709653 - conserved hypothetical protein KEGG: ypm:YP_2972 hypothetical protein gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0648 YPK_0649 YPK_0649 YPK_0649 709990 710643 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase TIGRFAM: 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase~KEGG: ypi:YpsIP31758_0567 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0649 YPK_0650 YPK_0650 YPK_0650 711102 711884 + Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: ypi:YpsIP31758_0570 extradiol ring-cleavage dioxygenase family protein gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0650 YPK_0651 YPK_0651 YPK_0651 712168 713328 - glutathionylspermidine synthase PFAM: glutathionylspermidine synthase~KEGG: ypi:YpsIP31758_0571 putative glutathionylspermidine synthase gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0651 YPK_0652 YPK_0652 YPK_0652 713338 714024 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0572 hypothetical protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0652 YPK_0653 YPK_0653 YPK_0653 714090 714260 + conserved hypothetical protein KEGG: ypm:YP_2977 hypothetical protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0653 YPK_0654 YPK_0654 YPK_0654 714325 715719 - type I secretion outer membrane protein%2C TolC family TIGRFAM: type I secretion outer membrane protein%2C TolC family~PFAM: outer membrane efflux protein~KEGG: ypi:YpsIP31758_0573 type I secretion outer membrane protein%2C TolC family gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0654 YPK_0655 YPK_0655 YPK_0655 716115 716747 + ADP-ribose diphosphatase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_0574 hydrolase%2C NUDIX family gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0655 YPK_0656 YPK_0656 YPK_0656 716781 717206 + protein of unknown function DUF1249 PFAM: protein of unknown function DUF1249~KEGG: ypi:YpsIP31758_0575 hypothetical protein gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0656 YPK_0657 YPK_0657 YPK_0657 717215 718057 + metallophosphoesterase PFAM: metallophosphoesterase%3B Calcineurin phosphoesterase domain protein~KEGG: yps:YPTB3397 Icc protein homologue gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0657 YPK_0658 YPK_0658 YPK_0658 718115 718696 + protein of unknown function UPF0227 PFAM: protein of unknown function UPF0227~KEGG: ypi:YpsIP31758_0577 esterase YqiA gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0658 YPK_0659 YPK_0659 YPK_0659 718798 720693 + DNA topoisomerase IV%2C B subunit KEGG: ypi:YpsIP31758_0578 DNA topoisomerase IV%2C B subunit~TIGRFAM: DNA topoisomerase IV%2C B subunit~PFAM: DNA gyrase subunit B domain protein%3B ATP-binding region ATPase domain protein%3B DNA topoisomerase type IIA subunit B region 2 domain protein~SMART: DNA topoisomerase II gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0659 YPK_0660 YPK_0660 YPK_0660 720697 721608 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0579 substrate-binding transcriptional regulator%2C LysR family gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0660 YPK_0661 YPK_0661 YPK_0661 721666 722250 - NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)~KEGG: ypi:YpsIP31758_0580 putative NADH-quinone reductase MdaB gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0661 YPK_0662 YPK_0662 YPK_0662 722554 724827 + DNA topoisomerase IV%2C A subunit KEGG: ypi:YpsIP31758_0581 DNA topoisomerase IV%2C A subunit~TIGRFAM: DNA topoisomerase IV%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0662 YPK_0663 YPK_0663 YPK_0663 725134 725865 + 1-acyl-sn-glycerol-3-phosphate acyltransferase KEGG: ypi:YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: phospholipid/glycerol acyltransferase gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0663 YPK_0664 YPK_0664 YPK_0664 725828 725935 + hypothetical protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0664 YPK_0665 YPK_0665 YPK_0665 726044 727468 + multicopper oxidase type 3 PFAM: multicopper oxidase type 2%3B multicopper oxidase type 3~KEGG: yps:YPTB3390 putative cell division protein gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0665 YPK_0666 YPK_0666 YPK_0666 727776 730103 + Radical SAM domain protein PFAM: Radical SAM domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: yps:YPTB3389 hypothetical protein gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0666 YPK_0667 YPK_0667 YPK_0667 730125 730958 - 2%2C5-didehydrogluconate reductase PFAM: aldo/keto reductase~KEGG: yps:YPTB3388 putative aldo/keto reductase family protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0667 YPK_0668 YPK_0668 YPK_0668 731377 732534 - iron-containing alcohol dehydrogenase PFAM: iron-containing alcohol dehydrogenase~KEGG: ypi:YpsIP31758_0587 alcohol dehydrogenase%2C iron-containing gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0668 YPK_0669 YPK_0669 YPK_0669 732931 733824 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B AraC-type transcriptional regulator domain protein~KEGG: ypi:YpsIP31758_0588 transcriptional regulator%2C AraC family gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0669 YPK_0670 YPK_0670 YPK_0670 733916 734578 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ypi:YpsIP31758_0589 hypothetical protein gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0670 YPK_0671 YPK_0671 YPK_0671 734772 735983 - cystathionine beta-lyase TIGRFAM: cystathionine beta-lyase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: ypi:YpsIP31758_0590 cystathionine beta-lyase gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0671 YPK_0672 YPK_0672 YPK_0672 736462 737499 + tonB-system energizer ExbB TIGRFAM: tonB-system energizer ExbB~PFAM: MotA/TolQ/ExbB proton channel~KEGG: ypm:YP_2997 TonB complex protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0672 YPK_0673 YPK_0673 YPK_0673 737503 737934 + TonB system transport protein ExbD TIGRFAM: TonB system transport protein ExbD~PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ypi:YpsIP31758_0592 TonB system transport protein ExbD gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0673 YPK_0674 YPK_0674 YPK_0674 737880 738065 - hypothetical protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0674 YPK_0675 YPK_0675 YPK_0675 738031 739586 - conserved hypothetical protein pseudogene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0675 YPK_0677 YPK_0677 YPK_0677 739611 740183 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0594 hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0677 YPK_0678 YPK_0678 YPK_0678 740167 740640 - TadE family protein PFAM: TadE family protein~KEGG: yps:YPTB3379 hypothetical protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0678 YPK_0679 YPK_0679 YPK_0679 740637 741407 - putative lipoprotein KEGG: ypi:YpsIP31758_0596 putative lipoprotein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0679 YPK_0680 YPK_0680 YPK_0680 741391 742224 - type II secretion system protein PFAM: type II secretion system protein~KEGG: ypi:YpsIP31758_0597 type II secretion system protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0680 YPK_0681 YPK_0681 YPK_0681 742221 743096 - type II secretion system protein PFAM: type II secretion system protein~KEGG: ypm:YP_3004 hypothetical protein gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0681 YPK_0682 YPK_0682 YPK_0682 743093 744379 - type II secretion system protein E PFAM: type II secretion system protein E~KEGG: ypm:YP_3005 putative type II secretion protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0682 YPK_0683 YPK_0683 YPK_0683 744391 745518 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0600 hypothetical protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0683 YPK_0684 YPK_0684 YPK_0684 745529 745819 - conserved hypothetical protein KEGG: yps:YPTB3373 hypothetical protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0684 YPK_0685 YPK_0685 YPK_0685 745816 747087 - type II and III secretion system protein PFAM: type II and III secretion system protein~KEGG: yps:YPTB3372 putative outer membrane secretin family protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0685 YPK_0686 YPK_0686 YPK_0686 747130 748011 - putative membrane protein KEGG: yps:YPTB3371 putative membrane protein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0686 YPK_0687 YPK_0687 YPK_0687 748063 748485 - peptidase A24A prepilin type IV PFAM: peptidase A24A prepilin type IV~KEGG: yps:YPTB3370 hypothetical protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0687 YPK_0688 YPK_0688 YPK_0688 748552 748749 - conserved hypothetical protein KEGG: yps:YPTB3369 hypothetical protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0688 YPK_0689 YPK_0689 YPK_0689 748971 749558 - putative transcriptional regulator%2C CadC KEGG: yps:YPTB3368 hypothetical protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0689 YPK_0690 YPK_0690 YPK_0690 750484 750633 - TnpA KEGG: sec:SC161 TnpA gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0690 YPK_0691 YPK_0691 YPK_0691 750764 751030 - hypothetical protein KEGG: ypi:YpsIP31758_0609 hypothetical protein gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0691 YPK_0692 YPK_0692 YPK_0692 751068 752465 - Fibronectin type III domain protein PFAM: Carbohydrate-binding family V/XII%3B Fibronectin type III domain protein%3B chitin-binding domain 3 protein~KEGG: ypi:YpsIP31758_0610 fibronectin type III domain protein/chitin binding domain protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0692 YPK_0693 YPK_0693 YPK_0693 752537 753952 - glycoside hydrolase family 18 PFAM: glycoside hydrolase family 18%3B Fibronectin type III domain protein~SMART: chitinase II~KEGG: yps:YPTB3365 putative Serratia marcescens-like C1 chitinase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0693 YPK_0694 YPK_0694 YPK_0694 755096 755626 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypi:YpsIP31758_1413 fimbria protein gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0694 YPK_0695 YPK_0695 YPK_0695 755933 758413 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: ypp:YPDSF_0481 outer membrane usher protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0695 YPK_0696 YPK_0696 YPK_0696 758431 759150 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: yps:YPTB3362 fimbrial chaperone protein gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0696 YPK_0697 YPK_0697 YPK_0697 759175 760278 + Fimbrial protein PFAM: Fimbrial protein~KEGG: yps:YPTB3361 fimbrial protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0697 YPK_0698 YPK_0698 YPK_0698 760490 761569 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypi:YpsIP31758_0617 ferrienterobactin-binding periplasmic protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0698 YPK_0699 YPK_0699 YPK_0699 762425 763420 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0619 hypothetical protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0699 YPK_0700 YPK_0700 YPK_0700 763512 764081 - lipoprotein KEGG: ypp:YPDSF_0487 lipoprotein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0700 YPK_0701 YPK_0701 YPK_0701 764093 764224 + conserved hypothetical protein KEGG: ypa:YPA_3089 hypothetical protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0701 YPK_0702 YPK_0702 YPK_0702 764293 766386 - type III secretion FHIPEP protein PFAM: type III secretion FHIPEP protein~KEGG: yps:YPTB3357 putative flagellar biosynthesis/export membrane protein flhA%2C fhiA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0702 YPK_0703 YPK_0703 YPK_0703 766376 767509 - flagellar biosynthetic protein FlhB TIGRFAM: flagellar biosynthetic protein FlhB~PFAM: type III secretion exporter~KEGG: yps:YPTB3356 putative flagellar assembly/export protein%2C flhB gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0703 YPK_0704 YPK_0704 YPK_0704 767509 768288 - flagellar biosynthetic protein FliR TIGRFAM: flagellar biosynthetic protein FliR~PFAM: type III secretion system inner membrane R protein~KEGG: ypk:y3471 putative flagellar biosynthetic protein gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0704 YPK_0705 YPK_0705 YPK_0705 768289 768561 - flagellar biosynthetic protein FliQ TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3~KEGG: yps:YPTB3354 putative flagellar assembly/export protein%2C fliQ gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0705 YPK_0706 YPK_0706 YPK_0706 768563 769333 - flagellar biosynthetic protein FliP KEGG: yps:YPTB3353 putative flagellar assembly/export protein%2C fliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0706 YPK_0707 YPK_0707 YPK_0707 769330 769743 - flagellar motor switch protein FliN TIGRFAM: flagellar motor switch protein FliN~PFAM: surface presentation of antigens (SPOA) protein~KEGG: yps:YPTB3352 flagellar switch protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0707 YPK_0708 YPK_0708 YPK_0708 769736 770635 - flagellar motor switch protein KEGG: ypp:YPDSF_0495 flagellar motor switch protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0708 YPK_0709 YPK_0709 YPK_0709 771158 772186 + sigma54 specific transcriptional regulator%2C Fis family PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase~KEGG: ypp:YPDSF_0496 sigma-54 transcriptional regulatory protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0709 YPK_0710 YPK_0710 YPK_0710 772203 772583 + flagellar hook-basal body complex protein FliE PFAM: flagellar hook-basal body complex protein FliE~KEGG: ypp:YPDSF_0497 flagellar hook-basal body complex protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0710 YPK_0711 YPK_0711 YPK_0711 772593 774233 + flagellar M-ring protein FliF TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein~KEGG: ypp:YPDSF_0498 flagellar M-ring protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0711 YPK_0712 YPK_0712 YPK_0712 774205 775248 + flagellar motor switch protein FliG PFAM: flagellar motor switch protein FliG~KEGG: yps:YPTB3347 puative flagellar motor switch protein gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0712 YPK_0713 YPK_0713 YPK_0713 775253 775969 + flagellar assembly protein FliH PFAM: flagellar assembly protein FliH~KEGG: yps:YPTB3346 putative flagellar assembly/export protein gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0713 YPK_0714 YPK_0714 YPK_0714 775962 777302 + ATPase%2C FliI/YscN family KEGG: ypm:YP_3029 putative flagellum-specific ATP synthase~TIGRFAM: ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region~SMART: AAA ATPase gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0714 YPK_0715 YPK_0715 YPK_0715 777306 777743 + flagellar export protein FliJ TIGRFAM: flagellar export protein FliJ~KEGG: yps:YPTB3344 hypothetical protein gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0715 YPK_0716 YPK_0716 YPK_0716 778043 778468 - conserved hypothetical protein KEGG: ypp:YPDSF_0503 hypothetical protein gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0716 YPK_0717 YPK_0717 YPK_0717 778475 778741 - putative flagellar regulatory protein KEGG: ypm:YP_3032 putative flagellar regulatory protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0717 YPK_0718 YPK_0718 YPK_0718 778989 779807 - flagella basal body P-ring formation protein FlgA TIGRFAM: flagella basal body P-ring formation protein FlgA~PFAM: SAF domain protein~KEGG: yps:YPTB3341 putative flagella basal body P-ring formation protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0718 YPK_0719 YPK_0719 YPK_0719 779895 780371 + flagellar basal-body rod protein FlgB TIGRFAM: flagellar basal-body rod protein FlgB~PFAM: flagellar basal body rod protein~KEGG: ypm:YP_3034 flagellar basal-body rod protein FlgB gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0719 YPK_0720 YPK_0720 YPK_0720 780374 780799 + flagellar basal-body rod protein FlgC TIGRFAM: flagellar basal-body rod protein FlgC~PFAM: protein of unknown function DUF1078 domain protein~KEGG: ypm:YP_3035 flagellar basal-body rod protein FlgC gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0720 YPK_0721 YPK_0721 YPK_0721 780802 781458 + flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: yps:YPTB3338 possible FlgD-like basal-body rod modification protein gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0721 YPK_0722 YPK_0722 YPK_0722 781513 781821 + flagellar basal body rod protein PFAM: flagellar basal body rod protein~KEGG: ypm:YP_3037 flagellar hook protein FlgE gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0722 YPK_0723 YPK_0723 YPK_0723 781827 782603 + conserved hypothetical protein KEGG: ypp:YPDSF_0517 hypothetical protein gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0723 YPK_0724 YPK_0724 YPK_0724 782767 783213 - conserved hypothetical protein KEGG: ypp:YPDSF_0518 hypothetical protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0724 YPK_0725 YPK_0725 YPK_0725 783194 784111 - putative transcriptional regulator%2C CadC KEGG: ypp:YPDSF_0519 regulatory protein gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0725 YPK_0726 YPK_0726 YPK_0726 784867 786072 + flagellin domain protein PFAM: flagellin domain protein~KEGG: yps:YPTB3326 putative flagellin gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0726 YPK_0727 YPK_0727 YPK_0727 786326 786481 + hypothetical protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0727 YPK_0728 YPK_0728 YPK_0728 786719 787486 + flagellin domain protein PFAM: flagellin domain protein~KEGG: ypi:YpsIP31758_0653 flagellin gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0728 YPK_0729 YPK_0729 YPK_0729 787488 788288 + putative flagellar hook-length control protein KEGG: ypm:YP_3052 putative flagellar hook-length control protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0729 YPK_0730 YPK_0730 YPK_0730 788332 788937 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: yps:YPTB3319 putative flagellar motor transmembrane channel protein gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0730 YPK_0731 YPK_0731 YPK_0731 788937 789848 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: ypa:YPA_3043 putative chemotaxis membrane protein gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0731 YPK_0732 YPK_0732 YPK_0732 790308 790904 + conserved hypothetical protein KEGG: ypa:YPA_3042 hypothetical protein gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0732 YPK_0733 YPK_0733 YPK_0733 790904 791356 + conserved hypothetical protein KEGG: ypa:YPA_3041 hypothetical protein gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0733 YPK_0734 YPK_0734 YPK_0734 791340 791711 + protein of unknown function DUF805 PFAM: protein of unknown function DUF805~KEGG: ypm:YP_3060 uncharacterized membrane protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0734 YPK_0735 YPK_0735 YPK_0735 791712 791840 + hypothetical protein gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0735 YPK_0736 YPK_0736 YPK_0736 791837 792304 - 17 kDa surface antigen PFAM: 17 kDa surface antigen~KEGG: yps:YPTB3313 putative outer membrane lipoprotein Pcp precursor gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0736 YPK_0737 YPK_0737 YPK_0737 793502 796069 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: yps:YPTB3308 conserved putative membrane protein~TIGRFAM: PAS sensor protein%3B diguanylate cyclase~PFAM: GGDEF domain containing protein%3B EAL domain protein%3B CHASE4 domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0737 YPK_0738 YPK_0738 YPK_0738 796508 797800 + efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: yps:YPTB3307 HlyD family drug efflux protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0738 YPK_0739 YPK_0739 YPK_0739 797813 800713 + transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein~KEGG: ypm:YP_3412 putative integral membrane efflux protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0739 YPK_0740 YPK_0740 YPK_0740 800713 800931 + putative integral membrane efflux protein KEGG: ypm:YP_3412 putative integral membrane efflux protein gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0740 YPK_0741 YPK_0741 YPK_0741 801066 802562 - ShET2 enterotoxin domain protein PFAM: ShET2 enterotoxin domain protein~KEGG: yps:YPTB3305 enterotoxin-like protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0741 YPK_0742 YPK_0742 YPK_0742 802840 803427 + conserved hypothetical protein KEGG: yps:YPTB3304 hypothetical protein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0742 YPK_0743 YPK_0743 YPK_0743 804249 817187 + outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein%3B autotransporter-associated beta strand repeat protein~PFAM: Pertactin%3B Autotransporter beta- domain protein%3B Haemagluttinin repeat-containing protein~KEGG: ypi:YpsIP31758_0673 putative autotransporter protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0743 YPK_0744 YPK_0744 YPK_0744 817304 819172 - putative antigenic leucine-rich repeat protein KEGG: yps:YPTB3302 putative antigenic leucine-rich repeat protein gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0744 YPK_0745 YPK_0745 YPK_0745 819734 820639 - antigenic leucine-rich repeat protein KEGG: ypn:YPN_3226 antigenic leucine-rich repeat protein gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0745 YPK_0746 YPK_0746 YPK_0746 820886 822733 - antigenic leucine-rich repeat protein KEGG: ypn:YPN_3227 antigenic leucine-rich repeat protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0746 YPK_0747 YPK_0747 YPK_0747 823239 823373 - hypothetical protein gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0747 YPK_0748 YPK_0748 YPK_0748 823482 825038 + AbgT putative transporter PFAM: AbgT putative transporter~KEGG: ypm:YP_3420 putative integral membrane efflux protein gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0748 YPK_0749 YPK_0749 YPK_0749 825480 826712 + peptidase T KEGG: yps:YPTB3299 peptidase T~TIGRFAM: peptidase T~PFAM: peptidase M20%3B peptidase M42 family protein%3B peptidase dimerisation domain protein gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0749 YPK_0750 YPK_0750 YPK_0750 827238 829310 + TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: yps:YPTB3298 TonB-dependent O.M. iron siderophore receptor/tranporter. gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0750 YPK_0751 YPK_0751 YPK_0751 829461 841088 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B condensation domain protein%3B phosphopantetheine-binding%3B Non-ribosomal peptide synthetase%3B Beta-ketoacyl synthase~KEGG: yps:YPTB3297 possible high molecular weight siderophore biosynthesis protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0751 YPK_0752 YPK_0752 YPK_0752 841101 846794 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Thioesterase%3B condensation domain protein%3B phosphopantetheine-binding%3B Methyltransferase type 11%3B Methyltransferase type 12%3B Non-ribosomal peptide synthetase~KEGG: ypn:YPN_3216 siderophore biosysnthesis protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0752 YPK_0753 YPK_0753 YPK_0753 846791 847861 + Saccharopine dehydrogenase PFAM: Saccharopine dehydrogenase~KEGG: ypi:YpsIP31758_0685 saccharopine dehydrogenase gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0753 YPK_0754 YPK_0754 YPK_0754 847858 848985 + thiazolinyl imide reductase TIGRFAM: thiazolinyl imide reductase~PFAM: oxidoreductase domain protein~KEGG: ypi:YpsIP31758_0686 thiazolinyl imide reductase family protein gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0754 YPK_0755 YPK_0755 YPK_0755 848978 849742 + Thioesterase PFAM: Thioesterase~KEGG: ypi:YpsIP31758_0687 putative thioesterase gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0755 YPK_0756 YPK_0756 YPK_0756 849732 851018 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0688 transporter%2C major facilitator family gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0756 YPK_0757 YPK_0757 YPK_0757 851018 852790 + ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_3430 ABC-transporter transmembrane protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0757 YPK_0758 YPK_0758 YPK_0758 852783 854540 + ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB3290 putative ABC iron siderophore transporter%2C fused permease and ATPase domains gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0758 YPK_0759 YPK_0759 YPK_0759 854863 855738 - conserved hypothetical protein KEGG: yps:YPTB3289 hypothetical protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0759 YPK_0760 YPK_0760 YPK_0760 856172 856570 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0692 hypothetical protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0760 YPK_0761 YPK_0761 YPK_0761 856807 856938 + hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0761 YPK_0762 YPK_0762 YPK_0762 857971 859452 + gluconate transporter TIGRFAM: gluconate transporter~PFAM: Gluconate transporter%3B Citrate transporter~KEGG: ypn:YPN_3207 gluconate transporter gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0762 YPK_0763 YPK_0763 YPK_0763 860468 864232 + outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Autotransporter beta- domain protein~KEGG: yps:YPTB3286 putative autotranporter secreted protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0763 YPK_0764 YPK_0764 YPK_0764 864818 867043 + type VI secretion system Vgr family protein TIGRFAM: type VI secretion system Vgr family protein~PFAM: Rhs element Vgr protein~KEGG: yps:YPTB3284 hypothetical protein gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0764 YPK_0765 YPK_0765 YPK_0765 867069 868388 + conserved hypothetical protein KEGG: yps:YPTB3283 hypothetical protein gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0765 YPK_0766 YPK_0766 YPK_0766 868402 872802 + YD repeat protein TIGRFAM: YD repeat protein~PFAM: RHS protein%3B YD repeat-containing protein~KEGG: ypm:YP_3439 rhs family protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0766 YPK_0767 YPK_0767 YPK_0767 872802 873215 + conserved hypothetical protein KEGG: pen:PSEEN2509 hypothetical protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0767 YPK_0768 YPK_0768 YPK_0768 873297 873842 + conserved hypothetical protein KEGG: esa:ESA_03913 hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0768 YPK_0769 YPK_0769 YPK_0769 873844 874437 + hypothetical protein KEGG: spc:Sputcn32_3608 hypothetical protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0769 YPK_0770 YPK_0770 YPK_0770 874708 876789 + YD repeat protein TIGRFAM: YD repeat protein~PFAM: RHS protein%3B YD repeat-containing protein~KEGG: ypi:YpsIP31758_0698 YD/rhs repeat protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0770 YPK_0771 YPK_0771 YPK_0771 876809 877171 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0699 hypothetical protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0771 YPK_0772 YPK_0772 YPK_0772 877295 878278 + RHS protein PFAM: RHS protein~KEGG: ypn:YPN_3201 hypothetical protein gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0772 YPK_0773 YPK_0773 YPK_0773 878275 878790 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0701 hypothetical protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0773 YPK_0774 YPK_0774 YPK_0774 878936 879259 + conserved hypothetical protein KEGG: yps:YPTB3275 hypothetical protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0774 YPK_0775 YPK_0775 YPK_0775 879503 880027 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0703 hypothetical protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0775 YPK_0776 YPK_0776 YPK_0776 880302 880688 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0704 hypothetical protein gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0776 YPK_0777 YPK_0777 YPK_0777 881232 881645 + conserved hypothetical protein KEGG: ypm:YP_3441 hypothetical protein gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0777 YPK_0778 YPK_0778 YPK_0778 881824 883203 - anion transporter TIGRFAM: anion transporter~PFAM: sodium/sulphate symporter%3B Citrate transporter~KEGG: ypm:YP_3442 di- and tricarboxylate transporters gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0778 YPK_0779 YPK_0779 YPK_0779 883418 884437 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_3443 putative transcription repressor gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0779 YPK_0780 YPK_0780 YPK_0780 884731 885804 + conserved hypothetical protein KEGG: yps:YPTB3269 hypothetical protein gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0780 YPK_0781 YPK_0781 YPK_0781 885966 887390 + sugar (Glycoside-Pentoside-Hexuronide) transporter TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter~KEGG: ypa:YPA_0269 sodium:galactoside symporter family protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0781 YPK_0782 YPK_0782 YPK_0782 887665 889845 - TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypi:YpsIP31758_0710 TonB-dependent siderophore receptor gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0782 YPK_0783 YPK_0783 YPK_0783 889917 891245 - L-lysine 6-monooxygenase (NADPH) KEGG: ypm:YP_3447 putative siderophore biosynthesis protein IucD gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0783 YPK_0784 YPK_0784 YPK_0784 891242 892990 - IucA/IucC family protein PFAM: IucA/IucC family protein~KEGG: ypa:YPA_0272 putative siderophore biosynthesis protein IucC gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0784 YPK_0785 YPK_0785 YPK_0785 892987 893937 - putative siderophore biosynthesis protein IucB KEGG: yps:YPTB3264 putative siderophore biosynthesis protein IucB gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0785 YPK_0786 YPK_0786 YPK_0786 893921 895693 - IucA/IucC family protein PFAM: IucA/IucC family protein~KEGG: ypi:YpsIP31758_0714 aerobactin siderophore biosynthesis protein IucA gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0786 YPK_0787 YPK_0787 YPK_0787 895690 895782 - hypothetical protein gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0787 YPK_0788 YPK_0788 YPK_0788 895833 897056 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB3262 MFS family efflux protein gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0788 YPK_0789 YPK_0789 YPK_0789 897347 898180 - intradiol ring-cleavage dioxygenase PFAM: intradiol ring-cleavage dioxygenase~KEGG: ypi:YpsIP31758_0716 dioxygenase family protein gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0789 YPK_0790 YPK_0790 YPK_0790 898556 899914 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0718 hypothetical protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0790 YPK_0791 YPK_0791 YPK_0791 900476 901219 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Autoinducer-binding domain protein~KEGG: ypi:YpsIP31758_0720 transcriptional regulator%2C LuxR family gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0791 YPK_0792 YPK_0792 YPK_0792 901200 901850 - autoinducer synthesis protein PFAM: autoinducer synthesis protein~KEGG: ypi:YpsIP31758_0719 N-acylhomoserine lactone synthase YtbI gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0792 YPK_0793 YPK_0793 YPK_0793 903021 903671 + Abortive infection protein PFAM: Abortive infection protein~KEGG: ypa:YPA_0281 hypothetical protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0793 YPK_0794 YPK_0794 YPK_0794 904188 904517 + lipoprotein KEGG: ypp:YPDSF_0536 lipoprotein gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0794 YPK_0795 YPK_0795 YPK_0795 904585 904848 + Insertion element protein PFAM: Insertion element protein~KEGG: ypi:YpsIP31758_0724 IS1%2C transposase orfA gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0795 YPK_0796 YPK_0796 YPK_0796 905005 905376 + conserved hypothetical protein KEGG: ypn:YPN_3177 hypothetical protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0796 YPK_0797 YPK_0797 YPK_0797 905419 905574 + hypothetical protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0797 YPK_0798 YPK_0798 YPK_0798 906784 907284 + type VI secretion protein%2C VC_A0107 family TIGRFAM: type VI secretion protein%2C VC_A0107 family~PFAM: conserved hypothetical protein~KEGG: ypp:YPDSF_1511 hypothetical protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0798 YPK_0799 YPK_0799 YPK_0799 907333 908877 + type VI secretion protein%2C EvpB/VC_A0108 family TIGRFAM: type VI secretion protein%2C EvpB/VC_A0108 family~PFAM: protein of unknown function DUF877~KEGG: yps:YPTB3251 hypothetical protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0799 YPK_0800 YPK_0800 YPK_0800 908889 910241 + type VI secretion protein%2C VC_A0114 family TIGRFAM: type VI secretion protein%2C VC_A0114 family~PFAM: protein of unknown function DUF876~KEGG: yps:YPTB3250 hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0800 YPK_0801 YPK_0801 YPK_0801 910238 910924 + conserved hypothetical protein KEGG: yps:YPTB1486 hypothetical protein gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0801 YPK_0802 YPK_0802 YPK_0802 910924 912660 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: yps:YPTB1487 OmpA family of outer membrane porins gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0802 YPK_0803 YPK_0803 YPK_0803 912664 913155 + type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_2506 hypothetical protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0803 YPK_0804 YPK_0804 YPK_0804 913543 916185 + type VI secretion ATPase%2C ClpV1 family KEGG: ypa:YPA_0765 putative ATPase subunit of ATP-dependent protease~TIGRFAM: type VI secretion ATPase%2C ClpV1 family~PFAM: AAA ATPase central domain protein%3B Clp domain protein%3B ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0804 YPK_0805 YPK_0805 YPK_0805 916188 918536 + type VI secretion system Vgr family protein TIGRFAM: type VI secretion system Vgr family protein~PFAM: Rhs element Vgr protein~KEGG: ypa:YPA_0766 hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0805 YPK_0806 YPK_0806 YPK_0806 918552 920849 + peptidase M23B PFAM: peptidase M23B~KEGG: ypi:YpsIP31758_0738 M23 peptidase domain protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0806 YPK_0807 YPK_0807 YPK_0807 920836 921603 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0739 hypothetical protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0807 YPK_0808 YPK_0808 YPK_0808 921699 921974 + Insertion element protein PFAM: Insertion element protein~KEGG: ypa:YPA_0299 insertion sequence protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0808 YPK_0809 YPK_0809 YPK_0809 922895 923407 + conserved hypothetical protein KEGG: ypp:YPDSF_0551 hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0809 YPK_0810 YPK_0810 YPK_0810 923697 923846 + putative phage integrase KEGG: ypi:YpsIP31758_3686 putative phage integrase gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0810 YPK_0811 YPK_0811 YPK_0811 924843 927005 + Ornithine decarboxylase PFAM: Orn/Lys/Arg decarboxylase major region%3B Orn/Lys/Arg decarboxylase domain protein~KEGG: ypi:YpsIP31758_0811 ornithine decarboxylase%2C constitutive gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0811 YPK_0812 YPK_0812 YPK_0812 927586 928545 + periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_0812 sugar ABC transporter%2C periplasmic sugar-binding protein gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0812 YPK_0813 YPK_0813 YPK_0813 928591 930090 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB3230 ABC sugar transporter%2C fused ATP-binding domains gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0813 YPK_0814 YPK_0814 YPK_0814 930123 931106 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypm:YP_3484 putative sugar transport system permeaseprotein gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0814 YPK_0815 YPK_0815 YPK_0815 931351 933495 - TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypa:YPA_0308 putative hydroxamate-type ferrisiderophore receptor gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0815 YPK_0816 YPK_0816 YPK_0816 933488 934588 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypa:YPA_0309 hypothetical protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0816 YPK_0817 YPK_0817 YPK_0817 934542 934712 - hypothetical protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0817 YPK_0818 YPK_0818 YPK_0818 934906 935994 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: ypa:YPA_0310 membrane-bound lytic murein transglycosylase C gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0818 YPK_0819 YPK_0819 YPK_0819 936165 936437 - Protein-tyrosine-phosphatase PFAM: Fe(II) trafficking protein YggX~KEGG: ypi:YpsIP31758_0818 putative Fe(2+) trafficking protein YggX gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0819 YPK_0820 YPK_0820 YPK_0820 936615 937874 - A/G-specific adenine glycosylase KEGG: ypm:YP_3489 A/G-specific adenine glycosylase~TIGRFAM: A/G-specific adenine glycosylase~PFAM: helix-hairpin-helix motif%3B HhH-GPD family protein~SMART: iron-sulfur cluster loop gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0820 YPK_0821 YPK_0821 YPK_0821 938143 938862 + tRNA (guanine-N(7)-)-methyltransferase KEGG: yps:YPTB3223 putative methyltransferase~TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase~PFAM: putative methyltransferase gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0821 YPK_0822 YPK_0822 YPK_0822 938862 939188 + protein of unknown function DUF469 PFAM: protein of unknown function DUF469~KEGG: ypi:YpsIP31758_0821 hypothetical protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0822 YPK_0823 YPK_0823 YPK_0823 939299 940225 + Glutaminase PFAM: Glutaminase%2C core~KEGG: yps:YPTB3221 glutaminase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0823 YPK_0824 YPK_0824 YPK_0824 940337 941071 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0823 hypothetical protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0824 YPK_0825 YPK_0825 YPK_0825 941575 950907 + virulence determinant KEGG: ypp:YPDSF_0568 virulence determinant gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0825 YPK_0826 YPK_0826 YPK_0826 951097 952227 - oxygen-independent coproporphyrinogen III oxidase KEGG: ypi:YpsIP31758_0825 putative oxygen-independent coproporphyrinogen III oxidase~TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0826 YPK_0827 YPK_0827 YPK_0827 952220 952813 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family protein~KEGG: ypa:YPA_0320 hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0827 YPK_0828 YPK_0828 YPK_0828 952913 953203 - protein of unknown function DUF167 PFAM: protein of unknown function DUF167~KEGG: ypm:YP_3498 hypothetical protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0828 YPK_0829 YPK_0829 YPK_0829 953200 953754 - protein of unknown function YGGT PFAM: protein of unknown function YGGT~KEGG: ypi:YpsIP31758_0828 putative YggT family membrane protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0829 YPK_0830 YPK_0830 YPK_0830 953717 953902 - hypothetical protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0830 YPK_0831 YPK_0831 YPK_0831 954042 954863 - pyrroline-5-carboxylate reductase KEGG: ypi:YpsIP31758_0829 pyrroline-5-carboxylate reductase~TIGRFAM: pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0831 YPK_0832 YPK_0832 YPK_0832 954996 955694 - alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: ypp:YPDSF_0574 hypothetical protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0832 YPK_0833 YPK_0833 YPK_0833 955714 956838 + twitching motility protein TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E~KEGG: yps:YPTB3212 putative outer membrane protein secreting MTB family gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0833 YPK_0834 YPK_0834 YPK_0834 956947 958062 - agmatine deiminase KEGG: yps:YPTB3211 hypothetical protein~TIGRFAM: agmatine deiminase~PFAM: Porphyromonas-type peptidyl-arginine deiminase gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0834 YPK_0835 YPK_0835 YPK_0835 958066 958950 - N-carbamoylputrescine amidase TIGRFAM: N-carbamoylputrescine amidase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: ypi:YpsIP31758_0833 N-carbamoylputrescine amidohydrolase gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0835 YPK_0836 YPK_0836 YPK_0836 959130 959552 - Holliday junction resolvase YqgF PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold~KEGG: ypi:YpsIP31758_0834 conserved hypothetical protein TIGR00250 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0836 YPK_0837 YPK_0837 YPK_0837 959552 960115 - protein of unknown function DUF179 PFAM: protein of unknown function DUF179~KEGG: ypi:YpsIP31758_0835 hypothetical protein gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0837 YPK_0838 YPK_0838 YPK_0838 960231 961190 - glutathione synthetase KEGG: yps:YPTB3207 glutathione synthetase~TIGRFAM: glutathione synthetase~PFAM: glutathione synthetase domain protein%3B glutathione synthetase ATP-binding%3B RimK domain protein ATP-grasp gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0838 YPK_0839 YPK_0839 YPK_0839 961216 961947 - protein of unknown function DUF558 PFAM: protein of unknown function DUF558~KEGG: ypi:YpsIP31758_0837 ribosomal small subunit methyltransferase RsmE gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0839 YPK_0840 YPK_0840 YPK_0840 962056 962202 - hypothetical protein KEGG: ypn:YPN_3130 hypothetical protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0840 YPK_0841 YPK_0841 YPK_0841 962262 962969 - Deoxyribonuclease I PFAM: Endonuclease I~KEGG: ypa:YPA_0333 endonuclease I gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0841 YPK_0842 YPK_0842 YPK_0842 963067 963630 - protein of unknown function DUF335 SprT PFAM: protein of unknown function DUF335 SprT~SMART: protein of unknown function SprT~KEGG: ypm:YP_3511 SprT protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0842 YPK_0843 YPK_0843 YPK_0843 963771 964925 - Methionine adenosyltransferase PFAM: S-adenosylmethionine synthetase~KEGG: ypi:YpsIP31758_0841 S-adenosylmethionine synthetase gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0843 YPK_0844 YPK_0844 YPK_0844 965743 965886 + hypothetical protein gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0844 YPK_0845 YPK_0845 YPK_0845 966132 968111 + arginine decarboxylase TIGRFAM: arginine decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: ypi:YpsIP31758_0843 biosynthetic arginine decarboxylase gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0845 YPK_0846 YPK_0846 YPK_0846 968311 968769 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0846 YPK_0847 YPK_0847 YPK_0847 968878 969033 + conserved hypothetical protein KEGG: ypp:YPDSF_2525 hypothetical protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0847 YPK_0848 YPK_0848 YPK_0848 969023 969481 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0848 YPK_0849 YPK_0849 YPK_0849 969795 970547 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: ypi:YpsIP31758_0845 peptidase%2C M48 family gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0849 YPK_0850 YPK_0850 YPK_0850 971021 973015 + transketolase TIGRFAM: transketolase~PFAM: Transketolase domain protein%3B Transketolase central region~KEGG: ypi:YpsIP31758_0847 transketolase gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0850 YPK_0851 YPK_0851 YPK_0851 973430 974446 + D-erythrose-4-phosphate dehydrogenase KEGG: ypi:YpsIP31758_0848 D-erythrose-4-phosphate dehydrogenase~TIGRFAM: D-erythrose-4-phosphate dehydrogenase~PFAM: glyceraldehyde 3-phosphate dehydrogenase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0851 YPK_0852 YPK_0852 YPK_0852 974549 975712 + Phosphoglycerate kinase PFAM: phosphoglycerate kinase~KEGG: ypi:YpsIP31758_0849 phosphoglycerate kinase gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0852 YPK_0853 YPK_0853 YPK_0853 975832 976911 + fructose-bisphosphate aldolase%2C class II KEGG: ypi:YpsIP31758_0850 fructose-bisphosphate aldolase%2C class II~TIGRFAM: ketose-bisphosphate aldolase%3B fructose-bisphosphate aldolase%2C class II~PFAM: ketose-bisphosphate aldolase class-II gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0853 YPK_0854 YPK_0854 YPK_0854 977349 978218 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel%3B Conserved TM helix repeat-containing protein~KEGG: ypa:YPA_0345 hypothetical protein gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0854 YPK_0855 YPK_0855 YPK_0855 978464 979081 + L-lysine exporter TIGRFAM: L-lysine exporter~PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ypk:y3305 hypothetical protein gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0855 YPK_0856 YPK_0856 YPK_0856 979250 980050 + protein of unknown function DUF541 PFAM: protein of unknown function DUF541~KEGG: ypa:YPA_0350 hypothetical protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0856 YPK_0857 YPK_0857 YPK_0857 980061 980969 - transcriptional regulator%2C LysR family TIGRFAM: transcriptional regulator%2C ArgP family~PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypa:YPA_0351 chromosome initiation inhibitor gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0857 YPK_0858 YPK_0858 YPK_0858 981311 981967 + ribose 5-phosphate isomerase KEGG: ypa:YPA_0352 ribose 5-phosphate isomerase A~TIGRFAM: ribose 5-phosphate isomerase~PFAM: Ribose 5-phosphate isomerase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0858 YPK_0859 YPK_0859 YPK_0859 982274 983515 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: amino acid-binding ACT domain protein%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: ypa:YPA_0353 D-3-phosphoglycerate dehydrogenase gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0859 YPK_0860 YPK_0860 YPK_0860 983780 984376 - 5-formyltetrahydrofolate cyclo-ligase PFAM: 5-formyltetrahydrofolate cyclo-ligase~KEGG: ypi:YpsIP31758_0857 5%2C10-methenyltetrahydrofolate synthetase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0860 YPK_0861 YPK_0861 YPK_0861 984740 985069 - protein of unknown function DUF710 PFAM: protein of unknown function DUF710~KEGG: ypi:YpsIP31758_0858 hypothetical protein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0861 YPK_0862 YPK_0862 YPK_0862 985406 985984 + yecA family protein TIGRFAM: yecA family protein~PFAM: protein of unknown function UPF0149~KEGG: ypi:YpsIP31758_0859 YecA family protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0862 YPK_0863 YPK_0863 YPK_0863 986072 987385 + peptidase M24 PFAM: peptidase M24%3B peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein~KEGG: yps:YPTB3185 proline-specific aminopeptidase gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0863 YPK_0864 YPK_0864 YPK_0864 987522 988700 + 2-polyprenyl-6-methoxyphenol 4-hydroxylase TIGRFAM: Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family%3B 2-polyprenyl-6-methoxyphenol 4-hydroxylase~PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase%3B tryptophan halogenase~KEGG: ypa:YPA_0358 2-octaprenyl-6-methoxyphenol hydroxylase gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0864 YPK_0865 YPK_0865 YPK_0865 988750 990093 + Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family TIGRFAM: Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family~PFAM: monooxygenase FAD-binding~KEGG: ypa:YPA_0359 putative monooxygenase gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0865 YPK_0866 YPK_0866 YPK_0866 990059 990298 + hypothetical protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0866 YPK_0867 YPK_0867 YPK_0867 990814 991911 + glycine cleavage system T protein TIGRFAM: glycine cleavage system T protein~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel~KEGG: ypa:YPA_0360 aminomethyltransferase gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0867 YPK_0868 YPK_0868 YPK_0868 991980 992366 + glycine cleavage system H protein TIGRFAM: glycine cleavage system H protein~PFAM: glycine cleavage H-protein~KEGG: ypi:YpsIP31758_0864 glycine cleavage system H protein gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0868 YPK_0869 YPK_0869 YPK_0869 992578 995457 + glycine dehydrogenase KEGG: ypa:YPA_0362 glycine dehydrogenase~TIGRFAM: glycine dehydrogenase~PFAM: glycine cleavage system P-protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0869 YPK_0870 YPK_0870 YPK_0870 995835 996272 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0867 hypothetical protein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0870 YPK_0871 YPK_0871 YPK_0871 997332 999482 + YadA domain protein PFAM: YadA domain protein%3B Haemagluttinin domain protein%3B Hep_Hag repeat-containing protein~KEGG: ypi:YpsIP31758_0868 haemagglutinin repeat protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0871 YPK_0872 YPK_0872 YPK_0872 999586 1000689 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0869 hypothetical protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0872 YPK_0873 YPK_0873 YPK_0873 1000891 1001592 + channel protein%2C hemolysin III family TIGRFAM: channel protein%2C hemolysin III family~PFAM: Hly-III family protein~KEGG: ypa:YPA_0368 putative hemolysin III gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0873 YPK_0874 YPK_0874 YPK_0874 1001884 1002381 + conserved hypothetical protein KEGG: ypa:YPA_0369 hypothetical protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0874 YPK_0875 YPK_0875 YPK_0875 1002454 1003446 - conserved hypothetical protein KEGG: ypp:YPDSF_0617 hypothetical protein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0875 YPK_0876 YPK_0876 YPK_0876 1003763 1004029 + protein of unknown function DUF339 PFAM: protein of unknown function DUF339~KEGG: ypi:YpsIP31758_0873 hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0876 YPK_0877 YPK_0877 YPK_0877 1004287 1004466 + hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0877 YPK_0878 YPK_0878 YPK_0878 1004435 1005133 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypa:YPA_0373 putative response regulator gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0878 YPK_0879 YPK_0879 YPK_0879 1005158 1006591 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypi:YpsIP31758_0876 sensor protein CreC gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0879 YPK_0880 YPK_0880 YPK_0880 1006676 1008133 + Inner membrane CreD family protein PFAM: Inner membrane CreD family protein~KEGG: yps:YPTB3169 putative membrane protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0880 YPK_0881 YPK_0881 YPK_0881 1008218 1008736 - flavodoxin TIGRFAM: flavodoxin~PFAM: flavodoxin/nitric oxide synthase~KEGG: ypa:YPA_0376 flavodoxin 2 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0881 YPK_0882 YPK_0882 YPK_0882 1008807 1009748 - integrase family protein PFAM: integrase family protein~KEGG: stt:t3400 probable bacteriophage integrase gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0882 YPK_0883 YPK_0883 YPK_0883 1009883 1010446 - CI repressor PFAM: CI repressor~KEGG: plu:plu0028 hypothetical protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0883 YPK_0884 YPK_0884 YPK_0884 1010585 1010815 + conserved hypothetical protein KEGG: sbo:SBO_0749 hypothetical protein gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0884 YPK_0885 YPK_0885 YPK_0885 1010818 1011351 + regulatory CII family protein PFAM: regulatory CII family protein~KEGG: yps:YPTB1769 regulatory protein CII bacteriophage 186 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0885 YPK_0886 YPK_0886 YPK_0886 1011361 1011546 + hypothetical protein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0886 YPK_0887 YPK_0887 YPK_0887 1011558 1011875 + gpB bacteriophage P2-like protein KEGG: yps:YPTB1768 similar to gpB bacteriophage P2 gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0887 YPK_0888 YPK_0888 YPK_0888 1011942 1012814 + DNA adenine methylase KEGG: yps:YPTB1863 putative DNA adenine methylase~TIGRFAM: DNA adenine methylase~PFAM: D12 class N6 adenine-specific DNA methyltransferase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0888 YPK_0889 YPK_0889 YPK_0889 1012853 1013080 + conserved hypothetical protein KEGG: yps:YPTB1767 hypothetical protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0889 YPK_0890 YPK_0890 YPK_0890 1013092 1013364 + putative relication initiation protein KEGG: ecv:APECO1_4463 putative relication initiation protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0890 YPK_0891 YPK_0891 YPK_0891 1013368 1014372 + phosphoadenosine phosphosulfate reductase PFAM: phosphoadenosine phosphosulfate reductase~KEGG: ent:Ent638_1349 phosphoadenosine phosphosulfate reductase gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0891 YPK_0892 YPK_0892 YPK_0892 1014369 1016648 + replication gene A PFAM: replication gene A~KEGG: yps:YPTB1766 putative phage P2 replication protein gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0892 YPK_0893 YPK_0893 YPK_0893 1016641 1017027 + putative GP46 protein KEGG: yps:YPTB1765 putative GP46 [bacteriophage N15] pir||T13133 protein GP46-... gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0893 YPK_0894 YPK_0894 YPK_0894 1017227 1017442 + hypothetical protein KEGG: ent:Ent638_1351 hypothetical protein gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0894 YPK_0895 YPK_0895 YPK_0895 1017419 1017685 - transcriptional activator Ogr/delta PFAM: transcriptional activator Ogr/delta~KEGG: spt:SPA2622 putative phage gene gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0895 YPK_0896 YPK_0896 YPK_0896 1017736 1018761 - phage portal protein%2C PBSX family TIGRFAM: phage portal protein%2C PBSX family~PFAM: portal protein~KEGG: sgl:SG0244 putative phage capsid portal protein gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0896 YPK_0897 YPK_0897 YPK_0897 1018758 1020545 - protein of unknown function DUF264 PFAM: protein of unknown function DUF264%3B putative terminase ATPase subunit~KEGG: spt:SPA2620 putative phage gene gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0897 YPK_0898 YPK_0898 YPK_0898 1020712 1021566 + putative capsid scaffolding protein KEGG: yen:YE0868 probable capsid scaffolding protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0898 YPK_0899 YPK_0899 YPK_0899 1021621 1022652 + phage major capsid protein%2C P2 family TIGRFAM: phage major capsid protein%2C P2 family~PFAM: major capsid protein P2~KEGG: spt:SPA2619 putative phage gene gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0899 YPK_0900 YPK_0900 YPK_0900 1022663 1023361 + small terminase subunit PFAM: small terminase subunit~KEGG: yps:YPTB3143 hypothetical protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0900 YPK_0901 YPK_0901 YPK_0901 1023457 1023909 + head completion protein PFAM: head completion protein~KEGG: spt:SPA2617 putative phage gene gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0901 YPK_0902 YPK_0902 YPK_0902 1023906 1024394 + putative phage protein KEGG: spt:SPA2616 putative phage gene gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0902 YPK_0903 YPK_0903 YPK_0903 1024397 1025068 + putative phage gene KEGG: spt:SPA2615 putative phage gene gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0903 YPK_0904 YPK_0904 YPK_0904 1025095 1026234 + putative phage gene KEGG: spt:SPA2614 putative phage gene gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0904 YPK_0905 YPK_0905 YPK_0905 1026231 1026683 + putative phage gene KEGG: spt:SPA2613 putative phage gene gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0905 YPK_0906 YPK_0906 YPK_0906 1026693 1026983 + holin family 2 PFAM: holin family 2~KEGG: spt:SPA2612 putative phage gene gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0906 YPK_0907 YPK_0907 YPK_0907 1026935 1027321 + conserved hypothetical protein KEGG: yps:YPTB3150 hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0907 YPK_0908 YPK_0908 YPK_0908 1027321 1027662 + conserved hypothetical protein KEGG: yps:YPTB3151 hypothetical protein gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0908 YPK_0909 YPK_0909 YPK_0909 1027812 1028078 + putative phage gene KEGG: spt:SPA2611 putative phage gene gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0909 YPK_0910 YPK_0910 YPK_0910 1028266 1030242 + phage tail tape measure protein%2C TP901 family TIGRFAM: phage tail tape measure protein%2C TP901 family~KEGG: spt:SPA2610 putative phage gene gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0910 YPK_0911 YPK_0911 YPK_0911 1030242 1030574 + putative phage gene KEGG: spt:SPA2609 putative phage gene gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0911 YPK_0912 YPK_0912 YPK_0912 1030567 1031751 + putative phage gene KEGG: spt:SPA2608 putative phage gene gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0912 YPK_0913 YPK_0913 YPK_0913 1031744 1032379 + conserved hypothetical phage-related protein KEGG: yen:YE0882 hypothetical phage-related protein gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0913 YPK_0914 YPK_0914 YPK_0914 1032390 1034159 + tail fiber repeat 2 protein PFAM: tail fiber repeat 2 protein~KEGG: yen:YE0883 probable tail fiber protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0914 YPK_0915 YPK_0915 YPK_0915 1034170 1034598 + tail assembly chaperone gp38 PFAM: tail assembly chaperone gp38~KEGG: yps:YPTB1288 putative tail fiber assembly protein P37 gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0915 YPK_0916 YPK_0916 YPK_0916 1034588 1035319 + putative phage gene KEGG: spt:SPA2604 putative phage gene gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0916 YPK_0917 YPK_0917 YPK_0917 1035285 1035833 + conserved hypothetical protein KEGG: plu:plu4051 hypothetical protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0917 YPK_0918 YPK_0918 YPK_0918 1035830 1037485 + conserved hypothetical protein KEGG: plu:plu4050 hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0918 YPK_0919 YPK_0919 YPK_0919 1037661 1037858 + conserved hypothetical protein KEGG: plu:plu3488 hypothetical protein gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0919 YPK_0920 YPK_0920 YPK_0920 1038281 1039180 + tyrosine recombinase XerD TIGRFAM: tyrosine recombinase XerD~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: ypa:YPA_0377 integrase/recombinase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0920 YPK_0921 YPK_0921 YPK_0921 1039211 1039927 + thiol:disulfide interchange protein DsbC KEGG: ypi:YpsIP31758_0880 thiol:disulfide interchange protein DsbC gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0921 YPK_0922 YPK_0922 YPK_0922 1039934 1041667 + single-stranded-DNA-specific exonuclease RecJ TIGRFAM: single-stranded-DNA-specific exonuclease RecJ~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~KEGG: ypi:YpsIP31758_0881 single-stranded-DNA-specific exonuclease RecJ gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0922 YPK_0923 YPK_0923 YPK_0923 1042012 1042944 + peptide chain release factor 2 TIGRFAM: peptide chain release factor 2~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: ypi:YpsIP31758_0882 peptide chain release factor 2 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0923 YPK_0924 YPK_0924 YPK_0924 1042954 1044471 + lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: ypi:YpsIP31758_0883 lysyl-tRNA synthetase gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0924 YPK_0925 YPK_0925 YPK_0925 1044904 1046118 + integrase family protein PFAM: integrase family protein~KEGG: ypi:YpsIP31758_0884 site-specific recombinase%2C phage integrase family gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0925 YPK_0926 YPK_0926 YPK_0926 1046941 1048638 - conserved hypothetical protein KEGG: yps:YPTB3161 hypothetical protein gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0926 YPK_0927 YPK_0927 YPK_0927 1048635 1049189 - conserved hypothetical protein KEGG: yps:YPTB3160 hypothetical protein gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0927 YPK_0928 YPK_0928 YPK_0928 1049182 1049892 - putative bacteriophage protein KEGG: yps:YPTB3159 possible bacteriophage protein gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0928 YPK_0929 YPK_0929 YPK_0929 1049889 1050407 - tail assembly chaperone gp38 PFAM: tail assembly chaperone gp38~KEGG: yps:YPTB3158 putative bacteriophage protein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0929 YPK_0930 YPK_0930 YPK_0930 1050407 1052002 - tail fiber repeat 2 protein PFAM: tail fiber repeat 2 protein~KEGG: yps:YPTB3157 hypothetical protein gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0930 YPK_0931 YPK_0931 YPK_0931 1052012 1052635 - putative bacteriophage protein KEGG: yps:YPTB3156 putative bacteriophage protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0931 YPK_0932 YPK_0932 YPK_0932 1052628 1053812 - putative bacteriophage protein KEGG: yps:YPTB3155 putative bacteriophage protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0932 YPK_0933 YPK_0933 YPK_0933 1053809 1054138 - conserved hypothetical protein KEGG: yps:YPTB3154 hypothetical protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0933 YPK_0934 YPK_0934 YPK_0934 1054135 1054293 - putative bacteriophage tail protein KEGG: yps:YPTB3153 putative bacteriophage tail protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0934 YPK_0935 YPK_0935 YPK_0935 1054290 1054580 - conserved hypothetical protein KEGG: yps:YPTB3148 hypothetical protein gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0935 YPK_0936 YPK_0936 YPK_0936 1054583 1055749 - conserved hypothetical protein KEGG: yps:YPTB3147 hypothetical protein gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0936 YPK_0937 YPK_0937 YPK_0937 1055746 1056447 - conserved hypothetical phage-related protein KEGG: yen:YE0872 hypothetical phage-related protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0937 YPK_0938 YPK_0938 YPK_0938 1056407 1056913 - conserved hypothetical phage-related protein KEGG: yen:YE0871A hypothetical phage-related protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0938 YPK_0939 YPK_0939 YPK_0939 1056910 1057362 - head completion protein PFAM: head completion protein~KEGG: yen:YE0871 head completion/stabilization protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0939 YPK_0940 YPK_0940 YPK_0940 1057482 1058225 - small terminase subunit PFAM: small terminase subunit~KEGG: yen:YE0870 probable terminase%2C endonuclease subunit gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0940 YPK_0941 YPK_0941 YPK_0941 1058243 1059415 - phage major capsid protein%2C P2 family TIGRFAM: phage major capsid protein%2C P2 family~KEGG: yen:YE0869 major capsid protein precursor gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0941 YPK_0942 YPK_0942 YPK_0942 1059498 1060433 - capsid scaffolding PFAM: capsid scaffolding~KEGG: yen:YE0868 probable capsid scaffolding protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0942 YPK_0943 YPK_0943 YPK_0943 1060611 1062704 + protein of unknown function DUF264 PFAM: protein of unknown function DUF264%3B putative terminase ATPase subunit~KEGG: yen:YE0867 terminase%2C ATPase subunit gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0943 YPK_0944 YPK_0944 YPK_0944 1062691 1063056 + putative portal vertex protein KEGG: yen:YE0866 putative portal vertex protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0944 YPK_0945 YPK_0945 YPK_0945 1062998 1063819 - P4 alpha zinc-binding domain protein PFAM: P4 alpha zinc-binding domain protein~KEGG: ypi:YpsIP31758_0890 nucleoside triphosphatase%2C D5 family gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0945 YPK_0946 YPK_0946 YPK_0946 1064119 1064445 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0891 hypothetical protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0946 YPK_0947 YPK_0947 YPK_0947 1064438 1064590 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0892 hypothetical protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0947 YPK_0948 YPK_0948 YPK_0948 1064604 1064804 - phage transcriptional regulator%2C AlpA PFAM: Prophage CP4-57 regulatory~KEGG: ypi:YpsIP31758_0893 AlpA family protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0948 YPK_0949 YPK_0949 YPK_0949 1064986 1065642 - conserved hypothetical protein KEGG: yps:YPTB3119 hypothetical protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0949 YPK_0950 YPK_0950 YPK_0950 1065655 1066020 - conserved hypothetical protein KEGG: yps:YPTB3118 hypothetical protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0950 YPK_0951 YPK_0951 YPK_0951 1066289 1067431 + filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: ypi:YpsIP31758_0896 Fic family protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0951 YPK_0952 YPK_0952 YPK_0952 1067938 1069470 + S-type Pyocin domain protein PFAM: S-type Pyocin domain protein~KEGG: yps:YPTB3116 hypothetical protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0952 YPK_0953 YPK_0953 YPK_0953 1069467 1069664 + conserved hypothetical protein KEGG: ypa:YPA_0401 hypothetical protein gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0953 YPK_0954 YPK_0954 YPK_0954 1070002 1070205 + conserved hypothetical protein KEGG: yps:YPTB3115 hypothetical protein gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0954 YPK_0955 YPK_0955 YPK_0955 1070252 1070536 + Colicin D PFAM: Colicin D~KEGG: ypi:YpsIP31758_0899 hypothetical protein gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0955 YPK_0956 YPK_0956 YPK_0956 1070946 1073105 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0900 hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0956 YPK_0957 YPK_0957 YPK_0957 1073075 1073842 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0901 hypothetical protein gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0957 YPK_0958 YPK_0958 YPK_0958 1074448 1075227 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0902 hypothetical protein gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0958 YPK_0959 YPK_0959 YPK_0959 1075483 1075749 + PAAR repeat-containing protein PFAM: PAAR repeat-containing protein~KEGG: ypi:YpsIP31758_0903 PaaR domain protein gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0959 YPK_0960 YPK_0960 YPK_0960 1075848 1076168 - conserved hypothetical protein KEGG: yps:YPTB3109 hypothetical protein gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0960 YPK_0961 YPK_0961 YPK_0961 1076168 1076848 - transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: yps:YPTB3108 hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0961 YPK_0962 YPK_0962 YPK_0962 1077291 1078148 - putative lipoprotein KEGG: yps:YPTB3107 putative lipoprotein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0962 YPK_0963 YPK_0963 YPK_0963 1078524 1078820 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0907 hypothetical protein gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0963 YPK_0964 YPK_0964 YPK_0964 1079820 1080821 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypa:YPA_0410 sugar-binding periplasmic protein gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0964 YPK_0965 YPK_0965 YPK_0965 1081255 1082283 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: yps:YPTB3104 ABC Sugar transporter%2C permease subunit gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0965 YPK_0966 YPK_0966 YPK_0966 1082330 1083838 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0912 ribose ABC transporter%2C ATP-binding protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0966 YPK_0967 YPK_0967 YPK_0967 1084377 1085483 - ABC transporter related PFAM: ABC transporter related%3B TOBE domain protein%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypm:YP_3554 putative transport ATP-binding protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0967 YPK_0968 YPK_0968 YPK_0968 1085839 1087074 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: yps:YPTB3101 ABC type periplasmic sugar(maltose)-binding protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0968 YPK_0969 YPK_0969 YPK_0969 1087097 1087237 + hypothetical protein gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0969 YPK_0970 YPK_0970 YPK_0970 1087234 1088541 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0915 ABC maltose/maltodextrin transporter%2C permease subunit gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0970 YPK_0971 YPK_0971 YPK_0971 1088553 1089404 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0416 putative maltodextrin permease protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0971 YPK_0972 YPK_0972 YPK_0972 1089409 1090611 + Arabinogalactan endo-1%2C4-beta-galactosidase PFAM: glycosyl hydrolase 53 domain protein~KEGG: ypi:YpsIP31758_0917 glycosyl hydrolase%2C family 53 gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0972 YPK_0973 YPK_0973 YPK_0973 1090662 1092722 + Beta-galactosidase PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~KEGG: ypi:YpsIP31758_0918 beta-galactosidase gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0973 YPK_0974 YPK_0974 YPK_0974 1092834 1093145 + phosphotransferase system PTS EIIB protein PFAM: phosphotransferase system PTS EIIB protein~KEGG: ypi:YpsIP31758_0919 PTS system%2C EIIB component gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0974 YPK_0975 YPK_0975 YPK_0975 1093502 1094761 - porin LamB type PFAM: porin LamB type~KEGG: ypi:YpsIP31758_0920 porin%2C LamB family gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0975 YPK_0976 YPK_0976 YPK_0976 1095033 1096106 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypa:YPA_0421 lactose operon repressor gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0976 YPK_0977 YPK_0977 YPK_0977 1096229 1098604 - Alpha-glucosidase PFAM: glycoside hydrolase family 31~KEGG: yps:YPTB3093 putative glucosidase-family 31 of glycosyl hydrolases gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0977 YPK_0978 YPK_0978 YPK_0978 1098735 1100042 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0926 putative hexuronate transporter gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0978 YPK_0979 YPK_0979 YPK_0979 1100436 1101518 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypa:YPA_0424 LacI-family regulatory protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0979 YPK_0980 YPK_0980 YPK_0980 1101508 1101825 + conserved hypothetical protein KEGG: yps:YPTB3090 hypothetical protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0980 YPK_0981 YPK_0981 YPK_0981 1101795 1102373 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: yps:YPTB3089 ThiJ/PfpI-family thiamine biogenesis protein gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0981 YPK_0982 YPK_0982 YPK_0982 1102397 1103251 - class II aldolase%2C tagatose bisphosphate family KEGG: ypi:YpsIP31758_0929 class II aldolase%2C tagatose bisphosphate family~TIGRFAM: ketose-bisphosphate aldolase%3B class II aldolase%2C tagatose bisphosphate family~PFAM: ketose-bisphosphate aldolase class-II gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0982 YPK_0983 YPK_0983 YPK_0983 1103362 1104849 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0930 hypothetical protein gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0983 YPK_0984 YPK_0984 YPK_0984 1104972 1106579 - sulfatase PFAM: sulfatase~KEGG: ypa:YPA_0428 putative sulfatase gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0984 YPK_0985 YPK_0985 YPK_0985 1106600 1107826 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: ypi:YpsIP31758_0932 putative sulfatase regulator gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0985 YPK_0986 YPK_0986 YPK_0986 1108070 1109128 - glycosyl hydrolase family 88 PFAM: glycosyl hydrolase family 88~KEGG: ypi:YpsIP31758_0933 glycosyl hydrolase%2C family 88 gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0986 YPK_0987 YPK_0987 YPK_0987 1109144 1109899 - 2-deoxy-D-gluconate 3-dehydrogenase TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ypm:YP_3535 2-deoxy-D-gluconate 3-dehydrogenase gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0987 YPK_0988 YPK_0988 YPK_0988 1110095 1111261 - N-acetylglucosamine-6-phosphate deacetylase KEGG: ypa:YPA_0432 putative acetylglucosamine-6-phosphate deacetylase~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase~PFAM: amidohydrolase gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0988 YPK_0989 YPK_0989 YPK_0989 1111264 1111704 - PTS system fructose subfamily IIA component PFAM: PTS system fructose subfamily IIA component~KEGG: yps:YPTB3081 PTS system%2C N-acetylgalactosamine-specific IIA component gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0989 YPK_0990 YPK_0990 YPK_0990 1111790 1112680 - PTS system mannose/fructose/sorbose family IID component PFAM: PTS system mannose/fructose/sorbose family IID component~KEGG: ypa:YPA_0434 putative PTS permease protein gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0990 YPK_0991 YPK_0991 YPK_0991 1112670 1113458 - phosphotransferase system PTS sorbose-specific IIC subunit PFAM: phosphotransferase system PTS sorbose-specific IIC subunit~KEGG: ypa:YPA_0435 putative PTS permease protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0991 YPK_0992 YPK_0992 YPK_0992 1113505 1114002 - PTS system%2C mannose/fructose/sorbose family%2C IIB subunit KEGG: ypi:YpsIP31758_0940 PTS system%2C N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIB subunit~PFAM: PTS system sorbose subfamily IIB component gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0992 YPK_0993 YPK_0993 YPK_0993 1114020 1115186 - sugar isomerase%2C AgaS family TIGRFAM: sugar isomerase%2C AgaS family~PFAM: sugar isomerase (SIS)~KEGG: ypi:YpsIP31758_0941 putative tagatose-6-phosphate ketose/aldose isomerase AgaS gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0993 YPK_0994 YPK_0994 YPK_0994 1115183 1116481 - D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit KEGG: ypi:YpsIP31758_0942 D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit~TIGRFAM: D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit~PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0994 YPK_0995 YPK_0995 YPK_0995 1116531 1117307 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~KEGG: ypi:YpsIP31758_0943 transcriptional repressor AgaR gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0995 YPK_0996 YPK_0996 YPK_0996 1118147 1119700 + sulfatase PFAM: sulfatase~KEGG: ypi:YpsIP31758_0945 sulfatase gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0996 YPK_0997 YPK_0997 YPK_0997 1119977 1123051 - Lyase catalytic PFAM: polysaccharide lyase family 8%3B Lyase %3B Lyase catalytic~KEGG: yps:YPTB3073 possible chondroitin ABC lyase gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0997 YPK_0998 YPK_0998 YPK_0998 1123160 1125346 - outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Autotransporter beta- domain protein~KEGG: yps:YPTB3072 putative secreted protein with autotransporter domain gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0998 YPK_0999 YPK_0999 YPK_0999 1125461 1126411 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0948 hypothetical protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_0999 YPK_1000 YPK_1000 YPK_1000 1127014 1127202 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0949 hypothetical protein gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1000 YPK_1001 YPK_1001 YPK_1001 1127698 1128453 + carbonic anhydrase PFAM: carbonic anhydrase~KEGG: yps:YPTB3068 putative carbonic anhydrase gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1001 YPK_1002 YPK_1002 YPK_1002 1129196 1129612 + putative transcriptional regulator%2C CadC KEGG: ypi:YpsIP31758_0951 hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1002 YPK_1003 YPK_1003 YPK_1003 1129682 1130185 + general secretion pathway protein C KEGG: ypa:YPA_0452 general secretion pathway protein C gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1003 YPK_1004 YPK_1004 YPK_1004 1130266 1132188 + general secretion pathway protein D TIGRFAM: general secretion pathway protein D~PFAM: type II and III secretion system protein%3B NolW domain protein~KEGG: yps:YPTB3065 general secretion pathway protein D gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1004 YPK_1005 YPK_1005 YPK_1005 1132185 1133696 + type II secretion system protein E PFAM: type II secretion system protein E~SMART: AAA ATPase~KEGG: yps:YPTB3064 general secretion pathway protein E gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1005 YPK_1006 YPK_1006 YPK_1006 1133683 1134885 + type II secretion system protein PFAM: type II secretion system protein~KEGG: ypm:YP_2842 putative general protein secretion protein gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1006 YPK_1007 YPK_1007 YPK_1007 1134905 1135342 + general secretion pathway protein G TIGRFAM: general secretion pathway protein G~PFAM: type II secretion system protein G~KEGG: ypi:YpsIP31758_0956 general secretion pathway protein G gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1007 YPK_1008 YPK_1008 YPK_1008 1135347 1135889 + general secretion pathway protein H KEGG: yps:YPTB3061 general secretion pathway protein H gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1008 YPK_1009 YPK_1009 YPK_1009 1135981 1136271 + type II secretion system protein I/J PFAM: type II secretion system protein I/J~KEGG: ypi:YpsIP31758_0957 general secretion pathway protein I gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1009 YPK_1010 YPK_1010 YPK_1010 1136264 1136860 + general secretion pathway protein J TIGRFAM: general secretion pathway protein J~KEGG: yps:YPTB3059 putative general secretion pathway protein J gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1010 YPK_1011 YPK_1011 YPK_1011 1136869 1137825 + general secretion pathway protein K KEGG: ypi:YpsIP31758_0959 general secretion pathway protein K gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1011 YPK_1012 YPK_1012 YPK_1012 1137809 1138999 + general secretion pathway protein L TIGRFAM: general secretion pathway protein L~PFAM: General secretion pathway L~KEGG: yps:YPTB3057 general secretion pathway protein L gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1012 YPK_1013 YPK_1013 YPK_1013 1138996 1139457 + conserved hypothetical protein KEGG: yps:YPTB3056 hypothetical protein gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1013 YPK_1014 YPK_1014 YPK_1014 1139483 1140325 + Prepilin peptidase PFAM: peptidase A24A prepilin type IV%3B peptidase A24A domain protein~KEGG: ypp:YPDSF_0703 prepilin peptidase gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1014 YPK_1015 YPK_1015 YPK_1015 1140309 1140674 - putative lipoprotein KEGG: yps:YPTB3054 putative lipoprotein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1015 YPK_1016 YPK_1016 YPK_1016 1140958 1141710 + transcriptional regulator%2C CadC PFAM: transcriptional regulator domain protein~KEGG: ypa:YPA_0465 putative regulatory membrane protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1016 YPK_1017 YPK_1017 YPK_1017 1141673 1142074 + conserved hypothetical protein KEGG: ypp:YPDSF_1720 hypothetical protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1017 YPK_1018 YPK_1018 YPK_1018 1142229 1143920 + methyl-accepting chemotaxis sensory transducer PFAM: ligand binding Tar domain protein%3B histidine kinase HAMP region domain protein%3B chemotaxis sensory transducer~KEGG: ypp:YPDSF_1719 methyl-accepting chemotaxis protein gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1018 YPK_1019 YPK_1019 YPK_1019 1143906 1144541 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0966 hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1019 YPK_1020 YPK_1020 YPK_1020 1144654 1145541 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: yps:YPTB3049 hypothetical protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1020 YPK_1021 YPK_1021 YPK_1021 1145648 1146556 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0969 substrate-binding transcriptional regulator%2C LysR family gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1021 YPK_1022 YPK_1022 YPK_1022 1146925 1148085 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0971 transporter%2C major facilitator family gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1022 YPK_1023 YPK_1023 YPK_1023 1148082 1149023 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: yps:YPTB3046 transcriptional activator protein LysR gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1023 YPK_1024 YPK_1024 YPK_1024 1149238 1150500 + diaminopimelate decarboxylase TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: yps:YPTB3045 diaminopimelate decarboxylase gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1024 YPK_1025 YPK_1025 YPK_1025 1150497 1151519 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_0972 transcriptional regulator GalR gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1025 YPK_1026 YPK_1026 YPK_1026 1151969 1154230 + molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region~KEGG: yps:YPTB3043 putative biotin sulfoxide reductas2 gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1026 YPK_1027 YPK_1027 YPK_1027 1154679 1156835 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase%3B phospholipid/glycerol acyltransferase~KEGG: ypi:YpsIP31758_0975 2-acylglycerophosphoethanolamine acyltransferase/acyl-(acyl-carrier-protein) synthetase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1027 YPK_1028 YPK_1028 YPK_1028 1156832 1158052 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0976 transporter%2C major facilitator family gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1028 YPK_1029 YPK_1029 YPK_1029 1158081 1158314 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0977 hypothetical protein gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1029 YPK_1030 YPK_1030 YPK_1030 1158393 1158644 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0978 hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1030 YPK_1031 YPK_1031 YPK_1031 1159021 1160061 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ypa:YPA_0479 putative aldo/keto reductase-family protein gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1031 YPK_1032 YPK_1032 YPK_1032 1160432 1161118 - DNA mismatch repair endonuclease mutH TIGRFAM: DNA mismatch repair endonuclease mutH~PFAM: DNA mismatch repair protein MutH~KEGG: ypa:YPA_0481 DNA mismatch repair protein gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1032 YPK_1033 YPK_1033 YPK_1033 1161815 1162342 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypa:YPA_0482 hypothetical protein gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1033 YPK_1034 YPK_1034 YPK_1034 1162355 1164601 + PTSINtr with GAF domain%2C PtsP TIGRFAM: phosphoenolpyruvate-protein phosphotransferase~PFAM: PEP-utilizing protein%3B GAF domain protein%3B PEP-utilising protein mobile region%3B PEP-utilising protein domain protein~KEGG: ypp:YPDSF_1704 phosphoenolpyruvate-protein phosphotransferase gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1034 YPK_1035 YPK_1035 YPK_1035 1164852 1165724 + prolipoprotein diacylglyceryl transferase PFAM: prolipoprotein diacylglyceryl transferase~KEGG: ypa:YPA_0484 prolipoprotein diacylglyceryl transferase gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1035 YPK_1036 YPK_1036 YPK_1036 1165731 1166525 + Thymidylate synthase PFAM: thymidylate synthase~KEGG: ypi:YpsIP31758_0984 thymidylate synthase gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1036 YPK_1037 YPK_1037 YPK_1037 1166769 1167338 + conserved hypothetical protein KEGG: ypa:YPA_0486 hypothetical protein gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1037 YPK_1038 YPK_1038 YPK_1038 1167329 1167937 + putative prepilin peptidase dependent protein KEGG: ypa:YPA_0487 putative prepilin peptidase dependent protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1038 YPK_1039 YPK_1039 YPK_1039 1167934 1168404 + conserved hypothetical protein KEGG: yps:YPTB3029 hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1039 YPK_1040 YPK_1040 YPK_1040 1168392 1168802 + prepilin peptidase dependent protein-like protein KEGG: ypi:YpsIP31758_0988 prepilin peptidase dependent protein-like protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1040 YPK_1041 YPK_1041 YPK_1041 1168937 1172308 + exodeoxyribonuclease V%2C gamma subunit TIGRFAM: exodeoxyribonuclease V%2C gamma subunit~PFAM: Exodeoxyribonuclease V RecC subunit~KEGG: ypm:YP_2881 exodeoxyribonuclease V gamma chain gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1041 YPK_1042 YPK_1042 YPK_1042 1172390 1175278 + peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: ypi:YpsIP31758_0990 protease III gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1042 YPK_1043 YPK_1043 YPK_1043 1175275 1178937 + exodeoxyribonuclease V%2C beta subunit TIGRFAM: exodeoxyribonuclease V%2C beta subunit~PFAM: UvrD/REP helicase~KEGG: yps:YPTB3025 exodeoxyribonuclease V beta chain gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1043 YPK_1044 YPK_1044 YPK_1044 1178934 1180907 + exodeoxyribonuclease V%2C alpha subunit TIGRFAM: exodeoxyribonuclease V%2C alpha subunit~KEGG: ypi:YpsIP31758_0992 exodeoxyribonuclease V%2C alpha subunit gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1044 YPK_1045 YPK_1045 YPK_1045 1181062 1182387 - amino-acid N-acetyltransferase TIGRFAM: amino-acid N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase%3B aspartate/glutamate/uridylate kinase~KEGG: ypi:YpsIP31758_0993 amino-acid N-acetyltransferase gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1045 YPK_1046 YPK_1046 YPK_1046 1182623 1183873 + N-acetylmuramoyl-L-alanine amidase PFAM: cell wall hydrolase/autolysin~KEGG: ypi:YpsIP31758_0994 N-acetylmuramoyl-L-alanine amidase%2C family 3 gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1046 YPK_1047 YPK_1047 YPK_1047 1184754 1185926 + MltA domain protein PFAM: MltA domain protein%3B 3D domain protein~KEGG: ypi:YpsIP31758_0995 membrane-bound lytic murein transglycosylase A gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1047 YPK_1048 YPK_1048 YPK_1048 1186069 1186896 + UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein~KEGG: yps:YPTB3020 hypothetical protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1048 YPK_1049 YPK_1049 YPK_1049 1186932 1187372 - cysteine desulfurase%2C sulfur acceptor subunit CsdE TIGRFAM: cysteine desulfurase%2C sulfur acceptor subunit CsdE~PFAM: Fe-S metabolism associated SufE~KEGG: ypi:YpsIP31758_0997 Fe-S metabolism associated protein gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1049 YPK_1050 YPK_1050 YPK_1050 1187508 1188713 - cysteine desulfurase%2C catalytic subunit CsdA KEGG: ypi:YpsIP31758_0998 cysteine sulfinate desulfinase~TIGRFAM: cysteine desulfurase%2C catalytic subunit CsdA~PFAM: aminotransferase class V gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1050 YPK_1051 YPK_1051 YPK_1051 1188790 1188924 + hypothetical protein gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1051 YPK_1052 YPK_1052 YPK_1052 1189388 1190305 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0999 glycine cleavage system transcriptional activator gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1052 YPK_1053 YPK_1053 YPK_1053 1190471 1190866 + protein of unknown function DUF423 PFAM: protein of unknown function DUF423~KEGG: ypa:YPA_0501 hypothetical protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1053 YPK_1054 YPK_1054 YPK_1054 1190859 1191965 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1001 hypothetical protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1054 YPK_1055 YPK_1055 YPK_1055 1192216 1192971 - 5'-3' exonuclease PFAM: 5'-3' exonuclease~SMART: Helix-hairpin-helix domain protein class 2~KEGG: ypi:YpsIP31758_1002 exodeoxyribonuclease-9 gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1055 YPK_1056 YPK_1056 YPK_1056 1193231 1194595 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypa:YPA_0507 hypothetical protein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1056 YPK_1057 YPK_1057 YPK_1057 1194748 1195593 - 7-cyano-7-deazaguanine reductase TIGRFAM: 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I~KEGG: ypp:YPDSF_1679 hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1057 YPK_1058 YPK_1058 YPK_1058 1195725 1196276 + Syd family protein PFAM: Syd family protein~KEGG: yps:YPTB3011 SecY interacting protein Syd gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1058 YPK_1059 YPK_1059 YPK_1059 1196984 1197316 + protein of unknown function DUF446 PFAM: protein of unknown function DUF446~KEGG: ypi:YpsIP31758_1006 hypothetical protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1059 YPK_1060 YPK_1060 YPK_1060 1197316 1198089 + pseudouridine synthase PFAM: pseudouridine synthase~KEGG: ypa:YPA_0512 hypothetical protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1060 YPK_1061 YPK_1061 YPK_1061 1198117 1198566 + flavodoxin/nitric oxide synthase PFAM: flavodoxin/nitric oxide synthase~KEGG: ypa:YPA_0513 hypothetical protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1061 YPK_1062 YPK_1062 YPK_1062 1198656 1199045 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1009 hypothetical protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1062 YPK_1063 YPK_1063 YPK_1063 1199169 1199993 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase TIGRFAM: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase~KEGG: ypa:YPA_0515 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1063 YPK_1064 YPK_1064 YPK_1064 1200168 1202906 - UTP-GlnB uridylyltransferase%2C GlnD KEGG: ypm:YP_2809 [protein-PII] uridylyltransferase~TIGRFAM: protein-P-II uridylyltransferase~PFAM: amino acid-binding ACT domain protein%3B DNA polymerase beta domain protein region%3B metal-dependent phosphohydrolase HD sub domain%3B GlnD PII-uridylyltransferase~SMART: metal-dependent phosphohydrolase HD region gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1064 YPK_1065 YPK_1065 YPK_1065 1202909 1203700 - methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: ypp:YPDSF_1670 methionine aminopeptidase gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1065 YPK_1066 YPK_1066 YPK_1066 1204135 1204860 + ribosomal protein S2 PFAM: ribosomal protein S2~KEGG: ypa:YPA_0518 30S ribosomal protein S2 gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1066 YPK_1067 YPK_1067 YPK_1067 1204988 1205845 + translation elongation factor Ts TIGRFAM: translation elongation factor Ts~PFAM: ubiquitin-associated- domain-containing protein%3B Translation elongation factor EFTs/EF1B dimerisation~KEGG: ypa:YPA_0520 elongation factor Ts gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1067 YPK_1068 YPK_1068 YPK_1068 1206054 1206779 + uridylate kinase TIGRFAM: uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: ypi:YpsIP31758_1015 uridylate kinase gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1068 YPK_1069 YPK_1069 YPK_1069 1206915 1207472 + ribosome recycling factor PFAM: ribosome recycling factor~KEGG: ypi:YpsIP31758_1016 ribosome recycling factor gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1069 YPK_1070 YPK_1070 YPK_1070 1207686 1208882 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase KEGG: ypi:YpsIP31758_1017 1-deoxy-D-xylulose 5-phosphate reductoisomerase~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1070 YPK_1071 YPK_1071 YPK_1071 1209106 1209864 + undecaprenyl diphosphate synthase KEGG: ypi:YpsIP31758_1018 undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1071 YPK_1072 YPK_1072 YPK_1072 1209874 1210722 + Phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: ypa:YPA_0526 phosphatidate cytidylyltransferase gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1072 YPK_1073 YPK_1073 YPK_1073 1210751 1212106 + membrane-associated zinc metalloprotease TIGRFAM: membrane-associated zinc metalloprotease~PFAM: PDZ/DHR/GLGF domain protein%3B peptidase M50~KEGG: ypa:YPA_0527 hypothetical protein gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1073 YPK_1074 YPK_1074 YPK_1074 1212143 1214530 + outer membrane protein assembly complex%2C YaeT protein TIGRFAM: outer membrane protein assembly complex%2C YaeT protein~PFAM: surface antigen (D15)%3B surface antigen variable number repeat protein~KEGG: ypi:YpsIP31758_1021 surface antigen/outer membrane protein%2C OMP85 family gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1074 YPK_1075 YPK_1075 YPK_1075 1214688 1215185 + outer membrane chaperone Skp (OmpH) PFAM: outer membrane chaperone Skp (OmpH)~KEGG: yps:YPTB2994 cationic 19 kDa outer membrane protein precursor gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1075 YPK_1076 YPK_1076 YPK_1076 1215189 1216211 + UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~PFAM: transferase hexapeptide repeat containing protein%3B UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD~KEGG: ypa:YPA_0530 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1076 YPK_1077 YPK_1077 YPK_1077 1216369 1216899 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ~KEGG: ypi:YpsIP31758_1024 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1077 YPK_1078 YPK_1078 YPK_1078 1216903 1217691 + acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase KEGG: ypa:YPA_0532 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosam ine O-acyltransferase~TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase~PFAM: transferase hexapeptide repeat containing protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1078 YPK_1079 YPK_1079 YPK_1079 1217695 1218879 + lipid-A-disaccharide synthase KEGG: ypa:YPA_0533 lipid-A-disaccharide synthase~TIGRFAM: lipid-A-disaccharide synthase~PFAM: glycosyl transferase family 19 gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1079 YPK_1080 YPK_1080 YPK_1080 1218876 1219472 + Ribonuclease H PFAM: ribonuclease HII/HIII~KEGG: ypa:YPA_0534 ribonuclease HII gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1080 YPK_1081 YPK_1081 YPK_1081 1219602 1223117 + DNA polymerase III%2C alpha subunit KEGG: yps:YPTB2988 DNA polymerase III%2C alpha chain~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B DNA polymerase III alpha subunit~SMART: phosphoesterase PHP domain protein gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1081 YPK_1082 YPK_1082 YPK_1082 1223130 1224089 + acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: acetyl-CoA carboxylase alpha subunit~KEGG: ypi:YpsIP31758_1029 acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1082 YPK_1083 YPK_1083 YPK_1083 1224273 1224671 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: ypa:YPA_0537 hypothetical protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1083 YPK_1084 YPK_1084 YPK_1084 1224673 1226055 + tRNA(Ile)-lysidine synthetase TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein%3B Protein of unkown function DUF1946 PP-loop ATpase~KEGG: yps:YPTB2985 cell cycle protein MesJ gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1084 YPK_1085 YPK_1085 YPK_1085 1226311 1226628 + cytochrome c class I PFAM: cytochrome c class I~KEGG: ypa:YPA_0539 putative cytochrome gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1085 YPK_1086 YPK_1086 YPK_1086 1226893 1227153 - transcriptional antiterminator%2C Rof PFAM: Modulator of Rho-dependent transcription termination~KEGG: yen:YE3263 hypothetical protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1086 YPK_1087 YPK_1087 YPK_1087 1227140 1227340 - protein of unknown function UPF0253 PFAM: protein of unknown function UPF0253~KEGG: ypi:YpsIP31758_1034 hypothetical protein gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1087 YPK_1088 YPK_1088 YPK_1088 1227582 1228130 + YaeQ family protein PFAM: YaeQ family protein~KEGG: ypi:YpsIP31758_1035 hypothetical protein gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1088 YPK_1089 YPK_1089 YPK_1089 1228109 1228549 + Class I peptide chain release factor PFAM: Class I peptide chain release factor~KEGG: ypi:YpsIP31758_1036 peptidyl-tRNA hydrolase domain protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1089 YPK_1090 YPK_1090 YPK_1090 1228634 1229317 + copper resistance lipoprotein NlpE PFAM: copper resistance lipoprotein NlpE~KEGG: ypm:YP_2782 putative copper homeostasis lipoprotein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1090 YPK_1091 YPK_1091 YPK_1091 1229451 1231169 - prolyl-tRNA synthetase TIGRFAM: prolyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein%3B YbaK/prolyl-tRNA synthetase associated region~KEGG: ypi:YpsIP31758_1038 prolyl-tRNA synthetase gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1091 YPK_1092 YPK_1092 YPK_1092 1231273 1231980 - protein of unknown function UPF0066 PFAM: protein of unknown function UPF0066~KEGG: yps:YPTB2977 hypothetical protein gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1092 YPK_1093 YPK_1093 YPK_1093 1231977 1232384 - putative lipoprotein KEGG: ypi:YpsIP31758_1040 putative lipoprotein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1093 YPK_1094 YPK_1094 YPK_1094 1232502 1233317 - lipoprotein%2C YaeC family TIGRFAM: lipoprotein%2C YaeC family~PFAM: NLPA lipoprotein~KEGG: yps:YPTB2975 possible ABC transporter%2C periplasmic solute binding protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1094 YPK_1095 YPK_1095 YPK_1095 1233381 1234034 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0549 ABC transporter permease protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1095 YPK_1096 YPK_1096 YPK_1096 1234027 1235058 - D-methionine ABC transporter%2C ATPase subunit KEGG: yps:YPTB2973 ABC transporter%2C ATP-binding subunit~TIGRFAM: D-methionine ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B D-methionine ABC transporter ATP-binding~SMART: AAA ATPase gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1096 YPK_1097 YPK_1097 YPK_1097 1235245 1235811 + D%2CD-heptose 1%2C7-bisphosphate phosphatase TIGRFAM: D%2CD-heptose 1%2C7-bisphosphate phosphatase%3B histidinol-phosphate phosphatase family protein%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~KEGG: ypa:YPA_0551 hypothetical protein gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1097 YPK_1101 YPK_1101 YPK_1101 1241958 1242761 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ypp:YPDSF_1636 aldo/keto reductase gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1101 YPK_1102 YPK_1102 YPK_1102 1242814 1243260 + conserved hypothetical protein KEGG: yps:YPTB2970 hypothetical protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1102 YPK_1103 YPK_1103 YPK_1103 1243299 1243406 + hypothetical protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1103 YPK_1104 YPK_1104 YPK_1104 1243642 1244403 + Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase~KEGG: ypa:YPA_0555 hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1104 YPK_1105 YPK_1105 YPK_1105 1244446 1245864 - Lytic transglycosylase catalytic PFAM: Peptidoglycan-binding LysM%3B Lytic transglycosylase catalytic%3B MLTD_N domain protein~KEGG: yps:YPTB2968 membrane-bound lytic murein transglycosylase D precursor gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1105 YPK_1106 YPK_1106 YPK_1106 1245897 1246652 - hydroxyacylglutathione hydrolase KEGG: ypi:YpsIP31758_1052 metallo-beta-lactamase family protein~TIGRFAM: hydroxyacylglutathione hydrolase~PFAM: beta-lactamase domain protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1106 YPK_1107 YPK_1107 YPK_1107 1246697 1247416 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: ypi:YpsIP31758_1053 putative methyltransferase gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1107 YPK_1108 YPK_1108 YPK_1108 1247471 1247935 - Ribonuclease H PFAM: ribonuclease H~KEGG: ypi:YpsIP31758_1054 RNase H gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1108 YPK_1109 YPK_1109 YPK_1109 1248005 1248769 + DNA polymerase III%2C epsilon subunit KEGG: ypi:YpsIP31758_1055 DNA polymerase III%2C epsilon subunit~TIGRFAM: DNA polymerase III%2C epsilon subunit~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1109 YPK_1110 YPK_1110 YPK_1110 1249015 1250499 - permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: yps:YPTB2963 putative nucleobase:cation symporter%2C NCS1 family gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1110 YPK_1111 YPK_1111 YPK_1111 1250820 1251770 + urate catabolism protein KEGG: ypi:YpsIP31758_1058 polysaccharide deacetylase family protein~TIGRFAM: urate catabolism protein~PFAM: polysaccharide deacetylase gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1111 YPK_1112 YPK_1112 YPK_1112 1251902 1252066 + hypothetical protein gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1112 YPK_1113 YPK_1113 YPK_1113 1252000 1253004 - Substrate-binding region of ABC-type glycine betaine transport system PFAM: Substrate-binding region of ABC-type glycine betaine transport system~KEGG: ypi:YpsIP31758_1059 glycine betaine/L-proline ABC transporter%2C periplasmic glycine betaine-binding protein gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1113 YPK_1114 YPK_1114 YPK_1114 1253052 1254218 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1060 glycine betaine/L-proline ABC transporter%2C permease protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1114 YPK_1115 YPK_1115 YPK_1115 1254211 1255410 - glycine betaine/L-proline ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_1061 glycine betaine/L-proline ABC transporter%2C ATP-binding protein~TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: CBS domain containing protein%3B ABC transporter related~SMART: AAA ATPase gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1115 YPK_1116 YPK_1116 YPK_1116 1256086 1257057 - Ribonucleoside-diphosphate reductase PFAM: ribonucleotide reductase~KEGG: yps:YPTB2958 ribonucleoside-diphosphate reductase 2 beta chain gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1116 YPK_1117 YPK_1117 YPK_1117 1257164 1259314 - ribonucleoside-diphosphate reductase%2C alpha subunit KEGG: ypp:YPDSF_1623 ribonucleoside-diphosphate reductase 2 alpha chain~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein%3B Ribonucleotide reductase domain protein gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1117 YPK_1118 YPK_1118 YPK_1118 1259296 1259700 - NrdI protein TIGRFAM: NrdI protein~PFAM: NrdI family protein~KEGG: ypi:YpsIP31758_1064 NrdI protein gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1118 YPK_1119 YPK_1119 YPK_1119 1259714 1259950 - glutaredoxin-like protein NrdH TIGRFAM: glutaredoxin-like protein NrdH~PFAM: glutaredoxin~KEGG: ypi:YpsIP31758_1065 glutaredoxin-related protein NrdH gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1119 YPK_1120 YPK_1120 YPK_1120 1260489 1260854 + Acid shock repeat protein PFAM: Acid shock repeat protein~KEGG: ypi:YpsIP31758_1066 acid shock repeat protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1120 YPK_1121 YPK_1121 YPK_1121 1261333 1261668 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1067 hypothetical protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1121 YPK_1122 YPK_1122 YPK_1122 1261766 1262215 - protein of unknown function DUF1198 PFAM: protein of unknown function DUF1198~KEGG: ypm:YP_2458 hypothetical protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1122 YPK_1123 YPK_1123 YPK_1123 1262380 1262718 - conserved hypothetical protein KEGG: ypm:YP_2459 hypothetical protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1123 YPK_1124 YPK_1124 YPK_1124 1263226 1263438 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypm:YP_2460 cold shock protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1124 YPK_1125 YPK_1125 YPK_1125 1264220 1265797 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ypi:YpsIP31758_1071 nickel ABC transporter%2C periplasmic nickel-binding protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1125 YPK_1126 YPK_1126 YPK_1126 1265797 1266765 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2462 putative membrane protein gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1126 YPK_1127 YPK_1127 YPK_1127 1266762 1267568 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2463 binding-protein-dependent transport protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1127 YPK_1128 YPK_1128 YPK_1128 1267568 1268374 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2464 putative transport ATPase gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1128 YPK_1129 YPK_1129 YPK_1129 1268367 1269032 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2465 putative transport ATPase gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1129 YPK_1130 YPK_1130 YPK_1130 1269151 1269276 + hypothetical protein gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1130 YPK_1131 YPK_1131 YPK_1131 1270231 1270533 + urease%2C gamma subunit KEGG: yen:YE0951 urease gamma subunit~TIGRFAM: urease%2C gamma subunit~PFAM: Urease gamma subunit region gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1131 YPK_1132 YPK_1132 YPK_1132 1270544 1271020 + urease%2C beta subunit KEGG: ypp:YPDSF_1610 urease beta subunit~TIGRFAM: urease%2C beta subunit~PFAM: Urease beta subunit gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1132 YPK_1133 YPK_1133 YPK_1133 1271110 1272828 + urease%2C alpha subunit KEGG: ypm:YP_2468 urease alpha subunit~TIGRFAM: urease%2C alpha subunit~PFAM: amidohydrolase%3B Urease alpha-subunit domain protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1133 YPK_1134 YPK_1134 YPK_1134 1273124 1273819 + UreE urease accessory domain protein PFAM: UreE urease accessory domain protein~KEGG: ypi:YpsIP31758_1080 urease accessory protein UreE gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1134 YPK_1135 YPK_1135 YPK_1135 1273841 1274527 + Urease accessory protein UreF PFAM: Urease accessory protein UreF~KEGG: yps:YPTB2940 urease accessory protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1135 YPK_1136 YPK_1136 YPK_1136 1274654 1275316 + urease accessory protein UreG TIGRFAM: urease accessory protein UreG~PFAM: cobalamin synthesis protein P47K~KEGG: ypm:YP_2471 urease accessory protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1136 YPK_1137 YPK_1137 YPK_1137 1275313 1276278 + Urease accessory protein UreD PFAM: Urease accessory protein UreD~KEGG: ypi:YpsIP31758_1083 urease accessory protein UreD gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1137 YPK_1138 YPK_1138 YPK_1138 1276470 1277462 + urea transporter TIGRFAM: urea transporter~PFAM: Urea transporter~KEGG: ypi:YpsIP31758_1084 UreA transporter gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1138 YPK_1139 YPK_1139 YPK_1139 1277611 1278669 + high-affinity nickel-transporter TIGRFAM: high-affinity nickel-transporter~KEGG: ypm:YP_2474 putative nickel transport protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1139 YPK_1140 YPK_1140 YPK_1140 1278834 1279163 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1086 hypothetical protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1140 YPK_1141 YPK_1141 YPK_1141 1279778 1280953 + TrkA-N domain protein PFAM: TrkA-N domain protein%3B Ion transport 2 domain protein~KEGG: ypi:YpsIP31758_1087 potassium channel protein Kch gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1141 YPK_1142 YPK_1142 YPK_1142 1281051 1281455 - Camphor resistance CrcB protein PFAM: Camphor resistance CrcB protein~KEGG: ypm:YP_2477 camphor resistance protein CrcB gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1142 YPK_1143 YPK_1143 YPK_1143 1281471 1281851 - CrcB protein TIGRFAM: CrcB protein~PFAM: Camphor resistance CrcB protein~KEGG: yps:YPTB2932 putative membrane protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1143 YPK_1144 YPK_1144 YPK_1144 1282892 1283209 + phosphotransferase system lactose/cellobiose-specific IIB subunit PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit~KEGG: ypi:YpsIP31758_1091 PTS system%2C cellobiose-specific IIB component gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1144 YPK_1145 YPK_1145 YPK_1145 1283220 1284581 + PTS system%2C lactose/cellobiose family IIC subunit TIGRFAM: PTS system%2C lactose/cellobiose family IIC subunit%3B PTS system%2C cellobiose-specific IIC subunit~PFAM: phosphotransferase system EIIC~KEGG: ypm:YP_2481 PTS system%2C cellobiose-specific IIC component gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1145 YPK_1146 YPK_1146 YPK_1146 1284748 1285095 + phosphotransferase system PTS lactose/cellobiose-specific IIA subunit PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit~KEGG: yps:YPTB2929 PTS system%2C cellobiose-specific IIA component gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1146 YPK_1147 YPK_1147 YPK_1147 1285132 1285974 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B Cupin 2 conserved barrel domain protein~KEGG: ypk:y1254 negative transcriptional regulator of cel operon gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1147 YPK_1148 YPK_1148 YPK_1148 1286026 1286787 + YdjC family protein PFAM: YdjC family protein~KEGG: ypi:YpsIP31758_1095 UPF0249 protein ChbG gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1148 YPK_1149 YPK_1149 YPK_1149 1286794 1286970 - conserved hypothetical protein KEGG: yps:YPTB2926 hypothetical protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1149 YPK_1150 YPK_1150 YPK_1150 1287083 1287451 - conserved hypothetical protein KEGG: yps:YPTB2925 hypothetical protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1150 YPK_1151 YPK_1151 YPK_1151 1287946 1288473 + SeqA family protein PFAM: SeqA family protein~KEGG: ypi:YpsIP31758_1098 protein SeqA gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1151 YPK_1152 YPK_1152 YPK_1152 1288546 1290189 + phosphoglucomutase%2C alpha-D-glucose phosphate-specific TIGRFAM: phosphoglucomutase%2C alpha-D-glucose phosphate-specific~PFAM: phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III~KEGG: ypi:YpsIP31758_1099 phosphoglucomutase%2C alpha-D-glucose phosphate-specific gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1152 YPK_1153 YPK_1153 YPK_1153 1290563 1290805 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1100 hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1153 YPK_1154 YPK_1154 YPK_1154 1290933 1291361 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane%3B Protein of unknown function DUF250~KEGG: ypm:YP_2490 hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1154 YPK_1155 YPK_1155 YPK_1155 1291456 1292085 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypi:YpsIP31758_1102 KDP operon transcriptional regulatory protein KdpE gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1155 YPK_1156 YPK_1156 YPK_1156 1292768 1295494 - osmosensitive K+ channel signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B Osmosensitive K channel His kinase sensor%3B UspA domain protein~KEGG: ypm:YP_2492 two-component regulatory protein sensor kinase KdpD gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1156 YPK_1157 YPK_1157 YPK_1157 1295504 1296154 - potassium-transporting ATPase%2C C subunit KEGG: ypm:YP_2493 putative potassium-transporting ATPase C chain~TIGRFAM: potassium-transporting ATPase%2C C subunit~PFAM: K transporting ATPase KdpC subunit gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1157 YPK_1158 YPK_1158 YPK_1158 1296318 1298384 - K+-transporting ATPase%2C B subunit TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B K+-transporting ATPase%2C B subunit~PFAM: Haloacid dehalogenase domain protein hydrolase%3B E1-E2 ATPase-associated domain protein~KEGG: ypi:YpsIP31758_1106 K+-transporting ATPase%2C B subunit gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1158 YPK_1159 YPK_1159 YPK_1159 1298478 1300166 - potassium-transporting ATPase%2C A subunit KEGG: yps:YPTB2916 P-type potassium-transporting ATPase%2C A chain~TIGRFAM: potassium-transporting ATPase%2C A subunit~PFAM: K transporting ATPase A subunit gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1159 YPK_1160 YPK_1160 YPK_1160 1300661 1300867 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1109 hypothetical protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1160 YPK_1161 YPK_1161 YPK_1161 1300951 1301079 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1110 hypothetical protein gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1161 YPK_1162 YPK_1162 YPK_1162 1301230 1301712 + Protein of unknown function DUF1722 PFAM: Protein of unknown function DUF1722~KEGG: yps:YPTB2914 hypothetical protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1162 YPK_1163 YPK_1163 YPK_1163 1301842 1303305 + Deoxyribodipyrimidine photo-lyase PFAM: DNA photolyase FAD-binding%3B DNA photolyase domain protein~KEGG: yps:YPTB2913 putative deoxyribodipyrimidine photolyase gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1163 YPK_1164 YPK_1164 YPK_1164 1303296 1304333 + cyclic-AMP phosphodiesterase PFAM: cyclic-AMP phosphodiesterase class-II~KEGG: yps:YPTB2912 putative 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1164 YPK_1165 YPK_1165 YPK_1165 1304456 1305202 + protein of unknown function DUF34 PFAM: protein of unknown function DUF34~KEGG: ypi:YpsIP31758_1114 conserved hypothetical protein TIGR00486 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1165 YPK_1166 YPK_1166 YPK_1166 1305287 1305442 - hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1166 YPK_1167 YPK_1167 YPK_1167 1305822 1306478 + Allophanate hydrolase subunit 1 PFAM: Allophanate hydrolase subunit 1~KEGG: ypi:YpsIP31758_1115 conserved hypothetical protein TIGR00370 gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1167 YPK_1168 YPK_1168 YPK_1168 1306472 1307422 + urea amidolyase related protein TIGRFAM: urea amidolyase related protein~PFAM: Allophanate hydrolase subunit 2~KEGG: yps:YPTB2909 hypothetical protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1168 YPK_1169 YPK_1169 YPK_1169 1307419 1308156 + LamB/YcsF family protein PFAM: LamB/YcsF family protein~KEGG: yps:YPTB2908 hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1169 YPK_1170 YPK_1170 YPK_1170 1308241 1308972 + protein of unknown function DUF969 PFAM: protein of unknown function DUF969~KEGG: ypi:YpsIP31758_1118 hypothetical protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1170 YPK_1171 YPK_1171 YPK_1171 1308969 1309988 + protein of unknown function DUF979 PFAM: protein of unknown function DUF979~KEGG: ypi:YpsIP31758_1119 hypothetical protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1171 YPK_1172 YPK_1172 YPK_1172 1309998 1310645 + pyrrolidone-carboxylate peptidase KEGG: yps:YPTB2905 putative pyrrolidone-carboxylate peptidase~TIGRFAM: pyrrolidone-carboxylate peptidase~PFAM: peptidase C15 pyroglutamyl peptidase I gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1172 YPK_1173 YPK_1173 YPK_1173 1310736 1311422 - uracil-DNA glycosylase TIGRFAM: uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase superfamily~KEGG: yps:YPTB2904 putative uracil-DNA glycosylase gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1173 YPK_1174 YPK_1174 YPK_1174 1311774 1312157 + formate C-acetyltransferase glycine radical PFAM: formate C-acetyltransferase glycine radical~KEGG: ypi:YpsIP31758_1122 autonomous glycyl radical cofactor gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1174 YPK_1175 YPK_1175 YPK_1175 1312336 1313298 + Phospholipase A(1) KEGG: yps:YPTB2902 phospholipase A gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1175 YPK_1176 YPK_1176 YPK_1176 1313291 1313389 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1124 hypothetical protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1176 YPK_1177 YPK_1177 YPK_1177 1313376 1314032 + Ankyrin PFAM: Ankyrin~KEGG: yps:YPTB2901 putative phospholipase A accessory protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1177 YPK_1178 YPK_1178 YPK_1178 1313986 1314135 + conserved hypothetical protein KEGG: ypk:y1286 hypothetical protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1178 YPK_1179 YPK_1179 YPK_1179 1314163 1315488 - DEAD/DEAH box helicase domain protein PFAM: helicase domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_1126 ATP-dependent RNA helicase SrmB gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1179 YPK_1180 YPK_1180 YPK_1180 1315728 1316486 + methyltransferase small PFAM: methyltransferase small%3B Methyltransferase type 12~KEGG: ypm:YP_2513 SAM-dependent methyltransferase gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1180 YPK_1181 YPK_1181 YPK_1181 1316769 1318406 - L-aspartate oxidase KEGG: yps:YPTB2898 L-aspartate oxidase~TIGRFAM: L-aspartate oxidase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1181 YPK_1182 YPK_1182 YPK_1182 1318594 1319169 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor RpoE~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein%3B Sigma-70 region 4 type 2~KEGG: ypi:YpsIP31758_1129 RNA polymerase sigma factor RpoE gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1182 YPK_1183 YPK_1183 YPK_1183 1319195 1319851 + anti sigma-E protein%2C RseA PFAM: Anti sigma-E protein RseA family protein%3B Anti sigma-E protein RseA domain protein~KEGG: ypi:YpsIP31758_1130 sigma E factor negative regulatory protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1183 YPK_1184 YPK_1184 YPK_1184 1319851 1320807 + sigma E regulatory protein%2C MucB/RseB PFAM: MucB/RseB family protein~KEGG: ypi:YpsIP31758_1131 sigma-E factor regulatory protein RseB gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1184 YPK_1185 YPK_1185 YPK_1185 1320804 1321259 + positive regulator of sigma E%2C RseC/MucC PFAM: Positive regulator of sigma(E) RseC/MucC~KEGG: ypm:YP_2518 sigma E factor regulatory protein gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1185 YPK_1186 YPK_1186 YPK_1186 1321280 1322134 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1133 hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1186 YPK_1187 YPK_1187 YPK_1187 1322634 1324433 + GTP-binding protein LepA TIGRFAM: small GTP-binding protein%3B GTP-binding protein LepA~PFAM: elongation factor G domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B GTP-binding protein LepA domain protein~KEGG: ypi:YpsIP31758_1134 GTP-binding protein LepA gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1187 YPK_1188 YPK_1188 YPK_1188 1324443 1325441 + signal peptidase I KEGG: ypp:YPDSF_1554 signal peptidase I~TIGRFAM: signal peptidase I~PFAM: peptidase S24 and S26 domain protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1188 YPK_1189 YPK_1189 YPK_1189 1325859 1326473 + Ribonuclease III PFAM: ribonuclease III%3B double-stranded RNA binding domain protein~KEGG: ypi:YpsIP31758_1136 ribonuclease III gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1189 YPK_1190 YPK_1190 YPK_1190 1326470 1327381 + GTP-binding protein Era TIGRFAM: small GTP-binding protein%3B GTP-binding protein Era~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein~KEGG: ypm:YP_2523 putative GTP-binding protein gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1190 YPK_1191 YPK_1191 YPK_1191 1327391 1328116 + DNA repair protein RecO TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O RecO~KEGG: ypm:YP_2524 DNA repair protein gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1191 YPK_1192 YPK_1192 YPK_1192 1328275 1329006 + pyridoxal phosphate biosynthetic protein PdxJ TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ~PFAM: Pyridoxal phosphate biosynthetic protein PdxJ~KEGG: ypp:YPDSF_1550 pyridoxal phosphate biosynthetic protein PdxJ gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1192 YPK_1193 YPK_1193 YPK_1193 1329006 1329386 + holo-acyl-carrier-protein synthase KEGG: ypi:YpsIP31758_1140 holo-(acyl-carrier-protein) synthase~TIGRFAM: holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1193 YPK_1194 YPK_1194 YPK_1194 1329491 1329676 - iron-sulfur cluster-binding protein KEGG: ypi:YpsIP31758_1141 iron-sulfur cluster-binding protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1194 YPK_1195 YPK_1195 YPK_1195 1329966 1331366 + conserved hypothetical protein KEGG: ssn:SSON_2685 hypothetical protein gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1195 YPK_1196 YPK_1196 YPK_1196 1331363 1331578 - hypothetical protein gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1196 YPK_1197 YPK_1197 YPK_1197 1331575 1332966 - conserved hypothetical protein KEGG: xfa:XF2528 hypothetical protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1197 YPK_1198 YPK_1198 YPK_1198 1333013 1333840 - putative DNA-binding protein (Roi) KEGG: aci:ACIAD2137 putative DNA-binding protein (Roi) gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1198 YPK_1199 YPK_1199 YPK_1199 1333815 1333997 - hypothetical protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1199 YPK_1200 YPK_1200 YPK_1200 1334124 1334435 + Arc domain protein DNA binding domain protein PFAM: Arc domain protein DNA binding domain protein~KEGG: ypk:y2192 hypothetical protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1200 YPK_1201 YPK_1201 YPK_1201 1334438 1334575 - Arc domain protein DNA binding domain protein PFAM: Arc domain protein DNA binding domain protein gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1201 YPK_1202 YPK_1202 YPK_1202 1334572 1334841 - VRR-NUC domain protein PFAM: VRR-NUC domain protein~KEGG: ckl:CKL_2657 hypothetical protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1202 YPK_1203 YPK_1203 YPK_1203 1334825 1335055 - hypothetical protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1203 YPK_1204 YPK_1204 YPK_1204 1335060 1337141 - DNA-directed DNA polymerase SMART: DNA-directed DNA polymerase~KEGG: xft:PD1727 phage-related DNA polymerase gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1204 YPK_1205 YPK_1205 YPK_1205 1337238 1338017 - conserved hypothetical protein KEGG: aav:Aave_1681 hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1205 YPK_1206 YPK_1206 YPK_1206 1338075 1338452 - conserved hypothetical protein KEGG: nme:NMB0907 hypothetical protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1206 YPK_1207 YPK_1207 YPK_1207 1338505 1339053 - conserved hypothetical protein KEGG: xft:PD1725 hypothetical protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1207 YPK_1208 YPK_1208 YPK_1208 1339066 1340376 - conserved hypothetical protein KEGG: xft:PD1724 hypothetical protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1208 YPK_1209 YPK_1209 YPK_1209 1340379 1341113 - hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1209 YPK_1210 YPK_1210 YPK_1210 1341572 1342201 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B peptidase S24 and S26 domain protein~KEGG: bbr:BB1678 putative phage repressor gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1210 YPK_1211 YPK_1211 YPK_1211 1342347 1342562 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~KEGG: ecs:ECs2989 putative regulatory protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1211 YPK_1212 YPK_1212 YPK_1212 1342566 1344743 + virulence-associated E family protein PFAM: virulence-associated E family protein~KEGG: bur:Bcep18194_A5640 virulence-associated E family protein gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1212 YPK_1213 YPK_1213 YPK_1213 1345022 1345234 + hypothetical protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1213 YPK_1214 YPK_1214 YPK_1214 1345316 1345741 + conserved hypothetical protein KEGG: plu:plu3038 hypothetical protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1214 YPK_1215 YPK_1215 YPK_1215 1346113 1346493 + hypothetical protein KEGG: ppu:PP_3884 phage holin%2C lambda family gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1215 YPK_1216 YPK_1216 YPK_1216 1346756 1347187 - hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1216 YPK_1217 YPK_1217 YPK_1217 1347392 1347724 + phage holin%2C lambda family TIGRFAM: phage holin%2C lambda family~PFAM: Holin phage lambda~KEGG: plu:plu3749 hypothetical protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1217 YPK_1218 YPK_1218 YPK_1218 1347711 1348106 + peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin~KEGG: eci:UTI89_C0932 putative endolysin gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1218 YPK_1219 YPK_1219 YPK_1219 1348103 1348480 + conserved hypothetical phage exported protein KEGG: yen:YE2333 hypothetical phage exported protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1219 YPK_1220 YPK_1220 YPK_1220 1348700 1349251 + Terminase small subunit PFAM: Terminase small subunit~KEGG: esa:ESA_03053 hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1220 YPK_1221 YPK_1221 YPK_1221 1349275 1349634 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~KEGG: ypa:YPA_0389 putative DNA binding protein gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1221 YPK_1222 YPK_1222 YPK_1222 1350090 1351694 + conserved hypothetical protein KEGG: sec:SC2610 hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1222 YPK_1223 YPK_1223 YPK_1223 1351947 1353485 + conserved hypothetical protein KEGG: plu:plu3405 hypothetical protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1223 YPK_1224 YPK_1224 YPK_1224 1353442 1354323 + putative head morphogenesis protein SPP1 gp7 PFAM: putative head morphogenesis protein SPP1 gp7~KEGG: ypi:YpsIP31758_2941 hypothetical protein gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1224 YPK_1225 YPK_1225 YPK_1225 1354316 1355464 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2940 hypothetical protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1225 YPK_1226 YPK_1226 YPK_1226 1355464 1355955 + hypothetical protein gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1226 YPK_1227 YPK_1227 YPK_1227 1355969 1357102 + hypothetical protein KEGG: sgl:SG0753 hypothetical protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1227 YPK_1228 YPK_1228 YPK_1228 1357161 1357529 + hypothetical protein gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1228 YPK_1229 YPK_1229 YPK_1229 1357539 1357970 + hypothetical protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1229 YPK_1230 YPK_1230 YPK_1230 1357970 1358467 + hypothetical protein KEGG: sgl:SG0754 hypothetical protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1230 YPK_1231 YPK_1231 YPK_1231 1358467 1358850 + hypothetical protein gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1231 YPK_1232 YPK_1232 YPK_1232 1358840 1359379 + hypothetical protein gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1232 YPK_1233 YPK_1233 YPK_1233 1359392 1360906 + hypothetical protein KEGG: ypi:YpsIP31758_2940 hypothetical protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1233 YPK_1234 YPK_1234 YPK_1234 1360918 1361358 + hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1234 YPK_1235 YPK_1235 YPK_1235 1361358 1361813 + hypothetical protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1235 YPK_1236 YPK_1236 YPK_1236 1361899 1363470 + hypothetical protein KEGG: ypi:YpsIP31758_2939 hypothetical protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1236 YPK_1237 YPK_1237 YPK_1237 1363470 1363979 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2938 hypothetical protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1237 YPK_1238 YPK_1238 YPK_1238 1363981 1364283 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2937 hypothetical protein gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1238 YPK_1239 YPK_1239 YPK_1239 1364287 1365126 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2936 hypothetical protein gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1239 YPK_1240 YPK_1240 YPK_1240 1365108 1365785 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2935 hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1240 YPK_1241 YPK_1241 YPK_1241 1365782 1366141 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2934 hypothetical protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1241 YPK_1242 YPK_1242 YPK_1242 1366125 1367324 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2933 hypothetical protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1242 YPK_1243 YPK_1243 YPK_1243 1367390 1369201 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2931 hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1243 YPK_1244 YPK_1244 YPK_1244 1369205 1369426 + hypothetical protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1244 YPK_1245 YPK_1245 YPK_1245 1369419 1371200 + bacterial Ig-like domain (group 2) protein KEGG: ypi:YpsIP31758_2930 bacterial Ig-like domain (group 2) protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1245 YPK_1246 YPK_1246 YPK_1246 1371232 1371510 - conserved hypothetical protein KEGG: yps:YPTB1895 hypothetical protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1246 YPK_1247 YPK_1247 YPK_1247 1371491 1372009 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2186 hypothetical protein gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1247 YPK_1248 YPK_1248 YPK_1248 1372457 1373296 - transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: ypi:YpsIP31758_1142 transcriptional regulator%2C RpiR family gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1248 YPK_1249 YPK_1249 YPK_1249 1373504 1374391 + glucokinase regulatory-like protein TIGRFAM: glucokinase regulatory-like protein~PFAM: sugar isomerase (SIS)~KEGG: ypi:YpsIP31758_1143 glucokinase regulator-like protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1249 YPK_1250 YPK_1250 YPK_1250 1374618 1375313 + HAD superfamily (subfamily IF) hydrolase%2C YfhB TIGRFAM: HAD superfamily (subfamily IF) hydrolase%2C YfhB~KEGG: ypp:YPDSF_2267 membrane protein gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1250 YPK_1251 YPK_1251 YPK_1251 1375423 1375986 + CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: ypk:y1307 deaminase gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1251 YPK_1252 YPK_1252 YPK_1252 1376113 1377654 - Lytic transglycosylase catalytic PFAM: extracellular solute-binding protein family 3%3B Lytic transglycosylase catalytic~KEGG: ypp:YPDSF_2265 membrane protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1252 YPK_1253 YPK_1253 YPK_1253 1377889 1381779 + phosphoribosylformylglycinamidine synthase KEGG: ypi:YpsIP31758_1147 phosphoribosylformylglycinamidine synthase~TIGRFAM: phosphoribosylformylglycinamidine synthase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1253 YPK_1254 YPK_1254 YPK_1254 1382196 1382645 - conserved hypothetical protein KEGG: yps:YPTB2878 hypothetical protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1254 YPK_1255 YPK_1255 YPK_1255 1383097 1383657 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1149 hypothetical protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1255 YPK_1256 YPK_1256 YPK_1256 1384673 1384774 + hypothetical protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1256 YPK_1257 YPK_1257 YPK_1257 1384852 1386288 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypi:YpsIP31758_1150 putative sensor-like histidine kinase YfhK gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1257 YPK_1258 YPK_1258 YPK_1258 1386292 1387359 + lipoprotein KEGG: ypn:YPN_1223 lipoprotein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1258 YPK_1259 YPK_1259 YPK_1259 1387322 1388659 + two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family PFAM: response regulator receiver%3B sigma-54 factor interaction domain-containing protein%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: ypm:YP_2543 two-component system response regulator gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1259 YPK_1260 YPK_1260 YPK_1260 1388679 1388822 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1153 hypothetical protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1260 YPK_1261 YPK_1261 YPK_1261 1388819 1390441 + NAD+ synthetase KEGG: ypi:YpsIP31758_1154 NAD+ synthetase family protein~TIGRFAM: NAD+ synthetase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase%3B NAD synthase gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1261 YPK_1262 YPK_1262 YPK_1262 1390456 1390794 + nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: yen:YE1039 nitrogen regulatory protein P-II gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1262 YPK_1263 YPK_1263 YPK_1263 1391022 1391954 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1156 hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1263 YPK_1264 YPK_1264 YPK_1264 1392385 1393575 - globin PFAM: globin%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: yps:YPTB2870 flavohemoprotein gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1264 YPK_1265 YPK_1265 YPK_1265 1394116 1395369 + Glycine hydroxymethyltransferase PFAM: glycine hydroxymethyltransferase~KEGG: ypm:YP_2548 serine hydroxymethyltransferase gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1265 YPK_1266 YPK_1266 YPK_1266 1395482 1395703 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1159 hypothetical protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1266 YPK_1267 YPK_1267 YPK_1267 1395703 1395828 + hypothetical protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1267 YPK_1268 YPK_1268 YPK_1268 1395821 1396360 + virulence-related outer membrane protein PFAM: virulence-related outer membrane protein~KEGG: ypi:YpsIP31758_1160 attachment invasion locus protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1268 YPK_1269 YPK_1269 YPK_1269 1396874 1398031 + Chloramphenicol O-acetyltransferase PFAM: proton/sugar symporter LacY%3B major facilitator superfamily MFS_1~KEGG: yps:YPTB2866 putative MFS family 3-phenylpropionic acid transporter gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1269 YPK_1270 YPK_1270 YPK_1270 1398028 1399389 - transcriptional antiterminator%2C BglG PFAM: PRD domain protein~KEGG: ypi:YpsIP31758_1161 stationary phase inducible protein CsiE gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1270 YPK_1271 YPK_1271 YPK_1271 1399531 1400205 + protein of unknown function DUF1007 PFAM: protein of unknown function DUF1007~KEGG: ypi:YpsIP31758_1163 hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1271 YPK_1272 YPK_1272 YPK_1272 1400196 1401218 + high-affinity nickel-transporter PFAM: high-affinity nickel-transporter~KEGG: ypk:y1330 hypothetical protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1272 YPK_1273 YPK_1273 YPK_1273 1401317 1402120 - Inositol-phosphate phosphatase PFAM: inositol monophosphatase~KEGG: ypi:YpsIP31758_1165 inositol-1-monophosphatase gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1273 YPK_1274 YPK_1274 YPK_1274 1402239 1403012 + RNA methyltransferase%2C TrmH family%2C group 1 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 1~PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: ypm:YP_2556 putative SpoU-family rRNA methylase gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1274 YPK_1275 YPK_1275 YPK_1275 1403105 1403662 + transcriptional regulator%2C BadM/Rrf2 family TIGRFAM: transcriptional regulator%2C Rrf2 family%3B iron-sulfur cluster assembly transcription factor IscR~PFAM: protein of unknown function UPF0074~KEGG: ypm:YP_2557 predicted transcriptional regulator gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1275 YPK_1276 YPK_1276 YPK_1276 1403716 1404945 + cysteine desulfurase IscS TIGRFAM: cysteine desulfurase IscS~PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: ypi:YpsIP31758_1168 cysteine desulfurase IscS gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1276 YPK_1277 YPK_1277 YPK_1277 1404976 1405362 + FeS cluster assembly scaffold IscU TIGRFAM: FeS cluster assembly scaffold IscU~PFAM: nitrogen-fixing NifU domain protein~KEGG: ypi:YpsIP31758_1169 FeS cluster assembly scaffold IscU gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1277 YPK_1278 YPK_1278 YPK_1278 1405632 1405955 + iron-sulfur cluster assembly protein IscA TIGRFAM: iron-sulfur cluster assembly accessory protein%3B iron-sulfur cluster assembly protein IscA~PFAM: HesB/YadR/YfhF-family protein~KEGG: ypi:YpsIP31758_1170 iron-sulfur cluster assembly protein IscA gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1278 YPK_1279 YPK_1279 YPK_1279 1406066 1406590 + co-chaperone Hsc20 TIGRFAM: co-chaperone Hsc20~PFAM: heat shock protein DnaJ domain protein%3B HSC20 oligomerisation~KEGG: ypp:YPDSF_2238 chaperone protein HscB gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1279 YPK_1280 YPK_1280 YPK_1280 1406833 1408749 + Fe-S protein assembly chaperone HscA KEGG: ypi:YpsIP31758_1172 Fe-S protein assembly chaperone HscA~TIGRFAM: Fe-S protein assembly chaperone HscA~PFAM: Heat shock protein 70 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1280 YPK_1281 YPK_1281 YPK_1281 1408752 1409087 + ferredoxin%2C 2Fe-2S type%2C ISC system TIGRFAM: ferredoxin%2C 2Fe-2S type%2C ISC system~PFAM: ferredoxin~KEGG: ypi:YpsIP31758_1173 ferredoxin%2C 2Fe-2S type%2C ISC system gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1281 YPK_1282 YPK_1282 YPK_1282 1409117 1409317 + FeS assembly protein IscX TIGRFAM: FeS assembly protein IscX~PFAM: protein of unknown function DUF528~KEGG: ypm:YP_2565 hypothetical protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1282 YPK_1283 YPK_1283 YPK_1283 1409314 1409412 + hypothetical protein gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1283 YPK_1284 YPK_1284 YPK_1284 1409457 1410755 + PepB aminopeptidase PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: ypm:YP_2566 peptidase B gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1284 YPK_1285 YPK_1285 YPK_1285 1410834 1411751 + SseB family protein PFAM: SseB family protein~KEGG: ypi:YpsIP31758_1176 SseB protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1285 YPK_1286 YPK_1286 YPK_1286 1412021 1413709 - outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Pertactin%3B Autotransporter beta- domain protein~KEGG: yps:YPTB2849 putative pertactin family virulence factor/autotransporter gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1286 YPK_1287 YPK_1287 YPK_1287 1413754 1415118 - Pertactin PFAM: Pertactin~KEGG: ypm:YP_2752 putative autotransporter protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1287 YPK_1288 YPK_1288 YPK_1288 1415834 1418254 + beta and gamma crystallin SMART: beta and gamma crystallin~KEGG: ypp:YPDSF_2229 hypothetical protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1288 YPK_1289 YPK_1289 YPK_1289 1418581 1419009 + Nucleoside-diphosphate kinase PFAM: nucleoside diphosphate kinase~KEGG: yps:YPTB2845 nucleoside diphosphate kinase gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1289 YPK_1290 YPK_1290 YPK_1290 1419271 1420467 + radical SAM enzyme%2C Cfr family TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM domain protein~KEGG: ypi:YpsIP31758_1183 radical SAM domain protein%2C Cfr family gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1290 YPK_1291 YPK_1291 YPK_1291 1420621 1421370 + type IV pilus biogenesis/stability protein PilW KEGG: ypm:YP_2747 putative fimbrial biogenesis protein~TIGRFAM: type IV pilus biogenesis/stability protein PilW~PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1291 YPK_1292 YPK_1292 YPK_1292 1421360 1422466 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: yps:YPTB2842 putative DNA-binding protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1292 YPK_1293 YPK_1293 YPK_1293 1422570 1423697 + 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase KEGG: ypm:YP_2745 putative acetyltransferase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: IspG family protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1293 YPK_1294 YPK_1294 YPK_1294 1423906 1425180 + histidyl-tRNA synthetase KEGG: ypm:YP_2744 histidyl-tRNA synthetase~TIGRFAM: histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1294 YPK_1295 YPK_1295 YPK_1295 1425194 1425829 + conserved hypothetical protein KEGG: ypm:YP_2743 hypothetical protein gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1295 YPK_1296 YPK_1296 YPK_1296 1425841 1427022 + outer membrane assembly lipoprotein YfgL TIGRFAM: outer membrane assembly lipoprotein YfgL~PFAM: Pyrrolo-quinoline quinone~KEGG: ypi:YpsIP31758_1189 putative lipoprotein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1296 YPK_1297 YPK_1297 YPK_1297 1427170 1428657 + small GTP-binding protein TIGRFAM: small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B Miro domain protein~KEGG: ypm:YP_2741 putative GTP-binding protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1297 YPK_1298 YPK_1298 YPK_1298 1429026 1429982 + Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: ypm:YP_2740 putative membrane protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1298 YPK_1299 YPK_1299 YPK_1299 1430031 1430255 + protein of unknown function DUF1407 PFAM: protein of unknown function DUF1407~KEGG: ypi:YpsIP31758_1192 hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1299 YPK_1300 YPK_1300 YPK_1300 1430275 1430385 + hypothetical protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1300 YPK_1301 YPK_1301 YPK_1301 1430339 1431718 - exodeoxyribonuclease VII%2C large subunit KEGG: yps:YPTB2834 exodeoxyribonuclease VII large subunit~TIGRFAM: exodeoxyribonuclease VII%2C large subunit~PFAM: Exonuclease VII large subunit%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1301 YPK_1302 YPK_1302 YPK_1302 1431888 1433351 + inosine-5'-monophosphate dehydrogenase KEGG: ypm:YP_2737 inosine-5'-monophosphate dehydrogenase~TIGRFAM: inosine-5'-monophosphate dehydrogenase~PFAM: CBS domain containing protein%3B IMP dehydrogenase/GMP reductase gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1302 YPK_1303 YPK_1303 YPK_1303 1433531 1435108 + GMP synthase%2C large subunit TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: glutamine amidotransferase class-I%3B GMP synthase domain protein~KEGG: ypi:YpsIP31758_1196 GMP synthase gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1303 YPK_1304 YPK_1304 YPK_1304 1435392 1435871 - type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_1198 hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1304 YPK_1305 YPK_1305 YPK_1305 1435895 1436128 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1199 hypothetical protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1305 YPK_1306 YPK_1306 YPK_1306 1436157 1436345 + hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1306 YPK_1307 YPK_1307 YPK_1307 1436357 1436752 - protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: ypn:YPN_1272 hypothetical protein gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1307 YPK_1308 YPK_1308 YPK_1308 1436814 1437209 - protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: ypn:YPN_1273 hypothetical protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1308 YPK_1309 YPK_1309 YPK_1309 1437273 1437668 - protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: yps:YPTB2827 hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1309 YPK_1310 YPK_1310 YPK_1310 1437665 1438585 - conserved hypothetical protein KEGG: yps:YPTB2826 hypothetical protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1310 YPK_1311 YPK_1311 YPK_1311 1439041 1439775 + conserved hypothetical protein KEGG: yen:YE1083 hypothetical protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1311 YPK_1312 YPK_1312 YPK_1312 1439928 1440869 + conserved hypothetical protein KEGG: yen:YE1083 hypothetical protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1312 YPK_1313 YPK_1313 YPK_1313 1440962 1441396 - IS1327 transposase pseudogene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1313 YPK_1315 YPK_1315 YPK_1315 1441580 1447510 - Ig domain protein group 1 domain protein PFAM: Peptidoglycan-binding LysM%3B Ig domain protein group 1 domain protein~SMART: Immunoglobulin subtype~KEGG: ypi:YpsIP31758_0608 putative invasin gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1315 YPK_1316 YPK_1316 YPK_1316 1447960 1448121 + Insertion element protein PFAM: Insertion element protein~KEGG: ypi:YpsIP31758_0740 IS1 family transposase orfA gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1316 YPK_1317 YPK_1317 YPK_1317 1448602 1449066 - protein of unknown function DUF943 PFAM: protein of unknown function DUF943~KEGG: ypi:YpsIP31758_1201 putative enterobacterial membrane protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1317 YPK_1318 YPK_1318 YPK_1318 1449056 1449900 - conserved hypothetical protein pseudogene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1318 YPK_1320 YPK_1320 YPK_1320 1450406 1450498 + hypothetical protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1320 YPK_1321 YPK_1321 YPK_1321 1450495 1451295 + phosphomethylpyrimidine kinase KEGG: ypi:YpsIP31758_1203 phosphomethylpyrimidine kinase~TIGRFAM: phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1321 YPK_1322 YPK_1322 YPK_1322 1451323 1452243 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1204 hypothetical protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1322 YPK_1323 YPK_1323 YPK_1323 1452474 1452983 + Inhibitor of vertebrate lysozyme PFAM: Inhibitor of vertebrate lysozyme~KEGG: yps:YPTB2822 hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1323 YPK_1324 YPK_1324 YPK_1324 1453270 1454160 - diacylglycerol kinase catalytic region PFAM: diacylglycerol kinase catalytic region~KEGG: ypm:YP_2722 putative diacylglycerol kinase gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1324 YPK_1325 YPK_1325 YPK_1325 1454797 1456191 - peptidase U32 PFAM: peptidase U32~KEGG: yps:YPTB2820 putative protease gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1325 YPK_1326 YPK_1326 YPK_1326 1456489 1456827 - protein of unknown function DUF1508 PFAM: protein of unknown function DUF1508~KEGG: ypi:YpsIP31758_1209 hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1326 YPK_1327 YPK_1327 YPK_1327 1456964 1457683 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypi:YpsIP31758_1210 transcriptional regulatory protein BaeR gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1327 YPK_1328 YPK_1328 YPK_1328 1457693 1459078 - integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypp:YPDSF_2202 hypothetical protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1328 YPK_1329 YPK_1329 YPK_1329 1459109 1460506 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_2717 hypothetical protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1329 YPK_1330 YPK_1330 YPK_1330 1460540 1463614 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: ypi:YpsIP31758_1213 multidrug resistance protein MdtC gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1330 YPK_1331 YPK_1331 YPK_1331 1463611 1466769 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: ypi:YpsIP31758_1214 multidrug resistance protein MdtB gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1331 YPK_1332 YPK_1332 YPK_1332 1466769 1468103 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: yps:YPTB2813 putitive HlyD family secretion protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1332 YPK_1333 YPK_1333 YPK_1333 1468491 1469576 - spermidine/putrescine ABC transporter ATPase subunit KEGG: ypi:YpsIP31758_1216 spermidine/putrescine ABC transporter%2C ATP-binding subunit~TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1333 YPK_1334 YPK_1334 YPK_1334 1469959 1471464 - transcriptional regulator%2C GntR family with aminotransferase domain PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~KEGG: ypp:YPDSF_2195 GntR-family regulatory protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1334 YPK_1335 YPK_1335 YPK_1335 1471646 1472935 + 4-aminobutyrate aminotransferase TIGRFAM: 4-aminobutyrate aminotransferase~PFAM: aminotransferase class-III~KEGG: ypm:YP_2711 4-aminobutyrate aminotransferase gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1335 YPK_1336 YPK_1336 YPK_1336 1472988 1474016 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_1219 spermidine/putrescine ABC transporter%2C periplasmic spermidine/putrescine-binding protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1336 YPK_1337 YPK_1337 YPK_1337 1474063 1475328 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1220 spermidine/putrescine ABC transporter%2C permease protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1337 YPK_1338 YPK_1338 YPK_1338 1475390 1476238 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: yps:YPTB2807 putative ABC opine/polyamine transporter%2C permease subunit gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1338 YPK_1339 YPK_1339 YPK_1339 1476310 1476450 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1222 hypothetical protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1339 YPK_1340 YPK_1340 YPK_1340 1476509 1477861 - putative chaperone protein KEGG: ypi:YpsIP31758_1223 putative chaperone protein gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1340 YPK_1341 YPK_1341 YPK_1341 1478001 1479476 - magnesium transporter TIGRFAM: magnesium transporter~PFAM: CBS domain containing protein%3B MgtE integral membrane region%3B MgtE intracellular region~KEGG: ypi:YpsIP31758_1224 magnesium transporter gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1341 YPK_1342 YPK_1342 YPK_1342 1479528 1479716 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1225 hypothetical protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1342 YPK_1343 YPK_1343 YPK_1343 1479905 1481464 - Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: ypi:YpsIP31758_1226 exopolyphosphatase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1343 YPK_1344 YPK_1344 YPK_1344 1481475 1483538 - Polyphosphate kinase PFAM: Polyphosphate kinase~KEGG: ypi:YpsIP31758_1227 polyphosphate kinase gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1344 YPK_1345 YPK_1345 YPK_1345 1483881 1486040 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: yps:YPTB2801 putative ABC phosphate transporter%2C permease subunit gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1345 YPK_1346 YPK_1346 YPK_1346 1486040 1487752 + phosphate ABC transporter%2C inner membrane subunit PstA TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1229 phosphate ABC transporter%2C permease protein PstA gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1346 YPK_1347 YPK_1347 YPK_1347 1487780 1488592 + phosphate ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_1230 phosphate ABC transporter%2C ATP-binding protein~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1347 YPK_1348 YPK_1348 YPK_1348 1488806 1489999 + protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: ypi:YpsIP31758_1231 FliB family protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1348 YPK_1349 YPK_1349 YPK_1349 1490093 1490638 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypi:YpsIP31758_1232 spermidine N(1)-acetyltransferase gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1349 YPK_1350 YPK_1350 YPK_1350 1490866 1491504 - phosphoribosylglycinamide formyltransferase TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein~KEGG: ypi:YpsIP31758_1233 phosphoribosylglycinamide formyltransferase gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1350 YPK_1351 YPK_1351 YPK_1351 1491619 1492662 - phosphoribosylformylglycinamidine cyclo-ligase KEGG: yps:YPTB2795 phosphoribosylaminoimidazole synthetase~TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1351 YPK_1352 YPK_1352 YPK_1352 1493097 1493723 + uracil phosphoribosyltransferase KEGG: ypm:YP_2695 uracil phosphoribosyltransferase~TIGRFAM: uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1352 YPK_1353 YPK_1353 YPK_1353 1493850 1495136 + uracil-xanthine permease TIGRFAM: uracil-xanthine permease~PFAM: Xanthine/uracil/vitamin C permease~KEGG: ypi:YpsIP31758_1236 uracil permease gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1353 YPK_1354 YPK_1354 YPK_1354 1495395 1496102 + DnaA regulatory inactivator Hda TIGRFAM: DnaA regulatory inactivator Hda~PFAM: Chromosomal replication initiator DnaA~KEGG: ypi:YpsIP31758_1237 DnaA-like protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1354 YPK_1355 YPK_1355 YPK_1355 1496315 1496671 - arsenate reductase TIGRFAM: arsenate reductase~PFAM: arsenate reductase and related~KEGG: ypi:YpsIP31758_1238 arsenate reductase (glutaredoxin) gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1355 YPK_1356 YPK_1356 YPK_1356 1496778 1498352 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p%3B Tetratricopeptide TPR_3~KEGG: ypm:YP_2691 hypothetical protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1356 YPK_1357 YPK_1357 YPK_1357 1498593 1499657 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: ypi:YpsIP31758_1240 putative permease PerM gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1357 YPK_1358 YPK_1358 YPK_1358 1500263 1500958 + conserved hypothetical protein KEGG: yps:YPTB2787 hypothetical protein gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1358 YPK_1359 YPK_1359 YPK_1359 1500962 1501381 + conserved hypothetical protein KEGG: yps:YPTB2786 hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1359 YPK_1360 YPK_1360 YPK_1360 1501625 1502095 - Peroxiredoxin PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B electron transport protein SCO1/SenC%3B Redoxin domain protein~KEGG: yps:YPTB2785 bacterioferritin comigratory protein gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1360 YPK_1361 YPK_1361 YPK_1361 1502098 1502712 - glycine cleavage system regulatory protein KEGG: ypm:YP_2685 glycine cleavage system regulatory protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1361 YPK_1362 YPK_1362 YPK_1362 1502814 1503713 + dihydrodipicolinate synthase TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase~KEGG: ypm:YP_2684 dihydrodipicolinate synthase gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1362 YPK_1363 YPK_1363 YPK_1363 1503731 1504789 + NlpBDapX family lipoprotein PFAM: NlpBDapX family lipoprotein~KEGG: ypi:YpsIP31758_1248 NlpB/DapX family lipoprotein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1363 YPK_1364 YPK_1364 YPK_1364 1504860 1505573 + phosphoribosylaminoimidazole-succinocarboxamide synthase KEGG: ypi:YpsIP31758_1249 phosphoribosylaminoimidazole-succinocarboxamide synthase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1364 YPK_1365 YPK_1365 YPK_1365 1505570 1505746 - hypothetical protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1365 YPK_1366 YPK_1366 YPK_1366 1505792 1506661 + protein of unknown function zinc metallopeptidase putative PFAM: protein of unknown function zinc metallopeptidase putative~KEGG: ypi:YpsIP31758_1250 metalloprotease-like protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1366 YPK_1367 YPK_1367 YPK_1367 1506755 1507207 + protein of unknown function DUF441 PFAM: protein of unknown function DUF441~KEGG: ypm:YP_2679 hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1367 YPK_1368 YPK_1368 YPK_1368 1507209 1509260 + protein of unknown function DUF699 ATPase putative PFAM: GCN5-related N-acetyltransferase%3B protein of unknown function DUF699 ATPase putative~KEGG: yps:YPTB2778 putative acetyltransferase gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1368 YPK_1369 YPK_1369 YPK_1369 1509383 1509508 + hypothetical protein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1369 YPK_1370 YPK_1370 YPK_1370 1509550 1509744 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1253 hypothetical protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1370 YPK_1371 YPK_1371 YPK_1371 1509812 1510489 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin~KEGG: ypi:YpsIP31758_1254 D-alanyl-D-alanine carboxypeptidase family protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1371 YPK_1372 YPK_1372 YPK_1372 1510486 1511613 - succinyl-diaminopimelate desuccinylase TIGRFAM: succinyl-diaminopimelate desuccinylase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~KEGG: yps:YPTB2775 succinyl-diaminopimelate desuccinylase gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1372 YPK_1373 YPK_1373 YPK_1373 1511615 1512013 - arsenate reductase and related PFAM: arsenate reductase and related~KEGG: ypi:YpsIP31758_1256 hypothetical protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1373 YPK_1374 YPK_1374 YPK_1374 1512173 1512646 - tetratricopeptide repeat protein KEGG: ypi:YpsIP31758_1257 tetratricopeptide repeat protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1374 YPK_1375 YPK_1375 YPK_1375 1512957 1514045 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: yps:YPTB2772 putative ABC transporter%2C periplasmmic iron binding protein gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1375 YPK_1376 YPK_1376 YPK_1376 1514140 1515909 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1259 ABC transporter%2C permease protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1376 YPK_1377 YPK_1377 YPK_1377 1515902 1516972 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2670 probable ABC-transporter%2C ATP-binding protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1377 YPK_1378 YPK_1378 YPK_1378 1517450 1519123 + sulfatase PFAM: sulfatase~KEGG: yps:YPTB2769 putative sulfatase gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1378 YPK_1379 YPK_1379 YPK_1379 1519180 1520355 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: yps:YPTB2768 putative sulfatase modifier protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1379 YPK_1380 YPK_1380 YPK_1380 1521102 1521650 - membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase~KEGG: ypm:YP_2668 putative membrane protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1380 YPK_1381 YPK_1381 YPK_1381 1521939 1522523 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1267 hypothetical protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1381 YPK_1382 YPK_1382 YPK_1382 1522754 1525885 - transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein~KEGG: ypi:YpsIP31758_1268 acriflavine resistance protein D gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1382 YPK_1383 YPK_1383 YPK_1383 1526300 1526578 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1269 hypothetical protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1383 YPK_1384 YPK_1384 YPK_1384 1526591 1527220 - two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver%3B Bacterio-opsin activator HTH domain protein~KEGG: ypm:YP_2664 nitrate/nitrite response regulator protein NarP gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1384 YPK_1385 YPK_1385 YPK_1385 1528053 1528556 + ferredoxin-type protein NapF TIGRFAM: ferredoxin-type protein NapF~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_1271 ferredoxin-type protein NapF gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1385 YPK_1386 YPK_1386 YPK_1386 1528546 1528812 + NapD family protein PFAM: NapD family protein~KEGG: ypi:YpsIP31758_1272 NapD protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1386 YPK_1387 YPK_1387 YPK_1387 1528809 1531301 + periplasmic nitrate reductase%2C large subunit TIGRFAM: periplasmic nitrate reductase%2C large subunit~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: ypi:YpsIP31758_1273 periplasmic nitrate reductase%2C large subunit gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1387 YPK_1388 YPK_1388 YPK_1388 1531384 1531851 + Nitrate reductase cytochrome c-type subunit (NapB) PFAM: Nitrate reductase cytochrome c-type subunit (NapB)~KEGG: yps:YPTB2759 cytochrome C-type protein NapB precursor gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1388 YPK_1389 YPK_1389 YPK_1389 1531879 1532478 + periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family~PFAM: NapC/NirT cytochrome c domain protein~KEGG: ypi:YpsIP31758_1275 periplasmic nitrate reductase%2C cytochrome c-type protein NapC gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1389 YPK_1390 YPK_1390 YPK_1390 1532640 1533236 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_1276 hydrolase%2C NUDIX family gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1390 YPK_1391 YPK_1391 YPK_1391 1533432 1535711 + Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))%2C Phosphate acetyltransferase PFAM: phosphate acetyl/butaryl transferase%3B malic protein domain protein%3B malic protein NAD-binding~KEGG: ypi:YpsIP31758_1277 NADP-dependent malic enzyme gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1391 YPK_1392 YPK_1392 YPK_1392 1535879 1536337 - protein of unknown function DUF188 PFAM: protein of unknown function DUF188~KEGG: ypi:YpsIP31758_1279 YaiI/YqxD family protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1392 YPK_1393 YPK_1393 YPK_1393 1536337 1537266 - Coproporphyrinogen oxidase PFAM: coproporphyrinogen III oxidase~KEGG: yps:YPTB2754 coproporphyrinogen III oxidase%2C aerobic HemF gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1393 YPK_1394 YPK_1394 YPK_1394 1537549 1537974 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypi:YpsIP31758_1281 acetyltransferase%2C GNAT family gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1394 YPK_1395 YPK_1395 YPK_1395 1538445 1538861 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1287 hypothetical protein gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1395 YPK_1396 YPK_1396 YPK_1396 1538953 1541232 - outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Pertactin%3B Autotransporter beta- domain protein~KEGG: ypi:YpsIP31758_1288 putative autotransporter protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1396 YPK_1397 YPK_1397 YPK_1397 1541737 1542150 - conserved hypothetical protein PFAM: nucleic acid binding OB-fold tRNA/helicase-type%3B conserved hypothetical protein~KEGG: ypi:YpsIP31758_1289 OB-fold nucleic acid binding domain protein gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1397 YPK_1398 YPK_1398 YPK_1398 1542513 1543124 + protein of unknown function DUF1131 PFAM: protein of unknown function DUF1131~KEGG: ypm:YP_2649 putative lipoprotein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1398 YPK_1399 YPK_1399 YPK_1399 1543302 1544201 + Dyp-type peroxidase family TIGRFAM: Dyp-type peroxidase family~PFAM: Dyp-type peroxidase~KEGG: yps:YPTB2743 putative iron-dependent peroxidase gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1399 YPK_1400 YPK_1400 YPK_1400 1544299 1545192 - dihydrodipicolinate synthetase PFAM: dihydrodipicolinate synthetase~KEGG: ypm:YP_2647 probable N-acetylneuraminate lyase gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1400 YPK_1401 YPK_1401 YPK_1401 1545255 1545956 - N-acylglucosamine-6-phosphate 2-epimerase PFAM: putative N-acetylmannosamine-6-phosphate epimerase~KEGG: ypm:YP_2646 putative N-acetylmannosamine-6-phosphate epimerase gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1401 YPK_1402 YPK_1402 YPK_1402 1546046 1546141 + hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1402 YPK_1403 YPK_1403 YPK_1403 1546281 1547252 - conserved hypothetical protein KEGG: ypm:YP_2645 hypothetical protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1403 YPK_1404 YPK_1404 YPK_1404 1547521 1548393 + ROK family protein PFAM: ROK family protein~KEGG: ypi:YpsIP31758_1295 putative N-acetylmannosamine kinase gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1404 YPK_1405 YPK_1405 YPK_1405 1548475 1548945 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypm:YP_2643 hypothetical protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1405 YPK_1406 YPK_1406 YPK_1406 1549134 1550012 + transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: ypi:YpsIP31758_1297 transcriptional regulator%2C RpiR family gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1406 YPK_1407 YPK_1407 YPK_1407 1550617 1552149 + major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_1298 transporter%2C major facilitator family gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1407 YPK_1408 YPK_1408 YPK_1408 1552482 1553519 + sulfate ABC transporter%2C periplasmic sulfate-binding protein TIGRFAM: sulfate ABC transporter%2C periplasmic sulfate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: ypm:YP_2639 thiosulfate-binding protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1408 YPK_1409 YPK_1409 YPK_1409 1553519 1554352 + sulfate ABC transporter%2C inner membrane subunit TIGRFAM: sulfate ABC transporter%2C inner membrane subunit%3B sulfate ABC transporter%2C inner membrane subunit CysT~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2638 sulfate transport system permease protein CysT gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1409 YPK_1410 YPK_1410 YPK_1410 1554352 1555227 + sulfate ABC transporter%2C inner membrane subunit CysW TIGRFAM: sulfate ABC transporter%2C inner membrane subunit%3B sulfate ABC transporter%2C inner membrane subunit CysW~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypk:y1468 sulfate/thiosulfate permease gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1410 YPK_1411 YPK_1411 YPK_1411 1555217 1556308 + sulfate ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_1302 sulfate/thiosulfate ABC transporter%2C ATP-binding protein CysA~TIGRFAM: sulfate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1411 YPK_1412 YPK_1412 YPK_1412 1556479 1557357 + cysteine synthase B TIGRFAM: cysteine synthase%3B cysteine synthase B~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: yps:YPTB2731 cysteine synthase B gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1412 YPK_1413 YPK_1413 YPK_1413 1557603 1558835 + conserved hypothetical protein KEGG: ypp:YPDSF_2117 hypothetical protein gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1413 YPK_1414 YPK_1414 YPK_1414 1559216 1559923 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_2633 putative response regulator gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1414 YPK_1415 YPK_1415 YPK_1415 1559920 1561464 - integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: ypm:YP_2632 putative two-component sensor histidine kinase gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1415 YPK_1416 YPK_1416 YPK_1416 1561697 1563115 - von Willebrand factor type A PFAM: von Willebrand factor type A~KEGG: ypm:YP_2631 putative membrane protein gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1416 YPK_1417 YPK_1417 YPK_1417 1563817 1564998 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: yps:YPTB2726 putative aminotransferase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1417 YPK_1418 YPK_1418 YPK_1418 1565032 1566252 + peptidase M24 PFAM: peptidase M24~KEGG: ypi:YpsIP31758_1308 peptidase%2C M24 family gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1418 YPK_1419 YPK_1419 YPK_1419 1566395 1566592 + conserved hypothetical protein KEGG: yps:YPTB2724 hypothetical protein gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1419 YPK_1420 YPK_1420 YPK_1420 1566589 1568049 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: ypi:YpsIP31758_1309 transporter%2C solute:sodium symporter (SSS) family gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1420 YPK_1421 YPK_1421 YPK_1421 1568109 1569755 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Rhodanese domain protein%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~KEGG: yps:YPTB2722 putative pyridine nucleotide-disulphide oxidoreductase gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1421 YPK_1422 YPK_1422 YPK_1422 1570010 1572046 - ABC transporter related PFAM: ABC transporter related%3B protein of unknown function DUF214~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1311 efflux ABC transporter%2C ATP-binding/permease protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1422 YPK_1423 YPK_1423 YPK_1423 1572050 1573255 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: yps:YPTB2720 putative HlyD family (ABC efflux pump associated) secretion protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1423 YPK_1424 YPK_1424 YPK_1424 1573443 1574126 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_2623 putative two-component system response regulator gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1424 YPK_1425 YPK_1425 YPK_1425 1574152 1575501 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypi:YpsIP31758_1314 sensor histidine kinase CpxA gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1425 YPK_1426 YPK_1426 YPK_1426 1575702 1576211 - PTS system%2C glucose subfamily%2C IIA subunit TIGRFAM: PTS system%2C glucose subfamily%2C IIA subunit~PFAM: sugar-specific permease EIIA 1 domain~KEGG: ypi:YpsIP31758_1315 PTS system%2C glucose-specific EIIA component gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1426 YPK_1427 YPK_1427 YPK_1427 1576260 1577987 - phosphoenolpyruvate-protein phosphotransferase TIGRFAM: phosphoenolpyruvate-protein phosphotransferase~PFAM: PEP-utilizing protein%3B PEP-utilising protein mobile region%3B PEP-utilising protein domain protein~KEGG: ypi:YpsIP31758_1316 phosphoenolpyruvate-protein phosphotransferase PtsI gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1427 YPK_1428 YPK_1428 YPK_1428 1578036 1578293 - Phosphotransferase system%2C phosphocarrier protein HPr TIGRFAM: phosphocarrier%2C HPr family~PFAM: phosphocarrier HPr protein~KEGG: ypi:YpsIP31758_1317 phosphocarrier%2C HPr family gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1428 YPK_1429 YPK_1429 YPK_1429 1578792 1579760 - cysteine synthase A TIGRFAM: cysteine synthase%3B cysteine synthase A~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypm:YP_2617 cysteine synthase A gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1429 YPK_1430 YPK_1430 YPK_1430 1579917 1580651 - protein of unknown function DUF540 PFAM: protein of unknown function DUF540~KEGG: ypi:YpsIP31758_1319 putative protein CysZ gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1430 YPK_1431 YPK_1431 YPK_1431 1580900 1581886 + cell division protein ZipA TIGRFAM: cell division protein ZipA~PFAM: ZipA FtsZ-binding region~KEGG: yps:YPTB2712 putative cell division protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1431 YPK_1432 YPK_1432 YPK_1432 1581977 1583989 + DNA ligase%2C NAD-dependent KEGG: ypi:YpsIP31758_1321 DNA ligase%2C NAD-dependent~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: helix-hairpin-helix motif%3B BRCT domain protein%3B zinc-finger NAD-dependent DNA ligase C4-type%3B NAD-dependent DNA ligase OB-fold%3B NAD-dependent DNA ligase adenylation~SMART: Helix-hairpin-helix DNA-binding class 1%3B NAD-dependent DNA ligase gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1432 YPK_1433 YPK_1433 YPK_1433 1584009 1584224 + conserved hypothetical protein KEGG: ypm:YP_2613 hypothetical protein gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1433 YPK_1434 YPK_1434 YPK_1434 1584325 1584672 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1323 hypothetical protein gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1434 YPK_1435 YPK_1435 YPK_1435 1584804 1585409 - protein of unknown function DUF925 PFAM: protein of unknown function DUF925~KEGG: ypi:YpsIP31758_1324 hypothetical protein gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1435 YPK_1437 YPK_1437 YPK_1437 1586063 1587478 - glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase~PFAM: glutamyl-tRNA synthetase class Ic~KEGG: ypi:YpsIP31758_1325 glutamyl-tRNA synthetase gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1437 YPK_1438 YPK_1438 YPK_1438 1589137 1590321 - nucleoside transporter TIGRFAM: nucleoside transporter~PFAM: Na+ dependent nucleoside transporter%3B nucleoside recognition domain protein%3B Na+ dependent nucleoside transporter domain protein~KEGG: ypm:YP_2608 nucleoside permease gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1438 YPK_1439 YPK_1439 YPK_1439 1590772 1592001 + Mn2+/Fe2+ transporter%2C NRAMP family TIGRFAM: Mn2+/Fe2+ transporter%2C NRAMP family~PFAM: natural resistance-associated macrophage protein~KEGG: ypk:y1500 putative manganese transport system permease gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1439 YPK_1440 YPK_1440 YPK_1440 1592094 1592507 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1328 hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1440 YPK_1441 YPK_1441 YPK_1441 1592678 1593667 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ypi:YpsIP31758_1329 oxidoreductase%2C aldo/keto reductase family gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1441 YPK_1442 YPK_1442 YPK_1442 1593803 1594681 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_1330 substrate-binding transcriptional regulator%2C LysR family gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1442 YPK_1443 YPK_1443 YPK_1443 1594784 1595260 + transmembrane pair domain protein PFAM: transmembrane pair domain protein~KEGG: ypm:YP_2603 hypothetical protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1443 YPK_1444 YPK_1444 YPK_1444 1595441 1596412 + glucokinase KEGG: ypm:YP_2602 glucokinase~TIGRFAM: glucokinase~PFAM: Glucokinase gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1444 YPK_1445 YPK_1445 YPK_1445 1596490 1597737 - protein of unknown function DUF1479 PFAM: protein of unknown function DUF1479~KEGG: yps:YPTB2699 hypothetical protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1445 YPK_1446 YPK_1446 YPK_1446 1598003 1599238 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: ypm:YP_2600 putative aminotransferase gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1446 YPK_1447 YPK_1447 YPK_1447 1599502 1600026 + cytochrome B561 PFAM: cytochrome B561~KEGG: ypi:YpsIP31758_1335 cytochrome b561 family protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1447 YPK_1448 YPK_1448 YPK_1448 1600121 1600552 - conserved hypothetical protein KEGG: ypm:YP_2598 hypothetical protein gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1448 YPK_1449 YPK_1449 YPK_1449 1601142 1601813 + Curli production assembly/transport component CsgG PFAM: Curli production assembly/transport component CsgG~KEGG: ypi:YpsIP31758_1337 curli production assembly/transport component CsgG gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1449 YPK_1450 YPK_1450 YPK_1450 1601840 1602196 + putative lipoprotein KEGG: ypi:YpsIP31758_1338 putative lipoprotein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1450 YPK_1451 YPK_1451 YPK_1451 1602193 1602849 + protein of unknown function DUF799 PFAM: protein of unknown function DUF799~KEGG: yps:YPTB2693 putative lipoprotein gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1451 YPK_1452 YPK_1452 YPK_1452 1603095 1603664 - 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_1340 putative ferredoxin-type protein NapF gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1452 YPK_1453 YPK_1453 YPK_1453 1603661 1604257 - cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein~KEGG: yps:YPTB2691 hypothetical protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1453 YPK_1454 YPK_1454 YPK_1454 1604739 1605515 - putative anaerobic dimethyl sulfoxide reductase%2C C subunit KEGG: ypi:YpsIP31758_1342 putative anaerobic dimethyl sulfoxide reductase%2C C subunit gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1454 YPK_1455 YPK_1455 YPK_1455 1605517 1606134 - dimethylsulfoxide reductase%2C chain B TIGRFAM: dimethylsulfoxide reductase%2C chain B~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_1343 putative anaerobic dimethyl sulfoxide reductase%2C B subunit gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1455 YPK_1456 YPK_1456 YPK_1456 1606146 1608572 - anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family TIGRFAM: anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: ypi:YpsIP31758_1344 putative anaerobic dimethyl sulfoxide reductase%2C A subunit gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1456 YPK_1457 YPK_1457 YPK_1457 1609403 1610251 + conserved hypothetical protein KEGG: yps:YPTB2687 hypothetical protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1457 YPK_1458 YPK_1458 YPK_1458 1610358 1610603 + hypothetical protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1458 YPK_1459 YPK_1459 YPK_1459 1610481 1610960 - type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_1346 hypothetical protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1459 YPK_1460 YPK_1460 YPK_1460 1611426 1611950 + conserved hypothetical protein KEGG: yps:YPTB2685 hypothetical protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1460 YPK_1461 YPK_1461 YPK_1461 1612023 1613072 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypp:YPDSF_2068 iron(III)-transport ATP-binding protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1461 YPK_1462 YPK_1462 YPK_1462 1613069 1614655 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1349 iron(III) ABC transporter%2C permease protein gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1462 YPK_1463 YPK_1463 YPK_1463 1614711 1615730 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_1350 iron(III) ABC transporter%2C permease protein%2C periplasmic iron(III)-binding protein gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1463 YPK_1464 YPK_1464 YPK_1464 1616059 1617153 + lytic murein transglycosylase B TIGRFAM: lytic murein transglycosylase B~KEGG: ypi:YpsIP31758_1351 lytic murein transglycosylase B gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1464 YPK_1465 YPK_1465 YPK_1465 1618395 1618997 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~KEGG: ypi:YpsIP31758_1353 transcriptional regulator%2C LuxR family gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1465 YPK_1466 YPK_1466 YPK_1466 1619370 1619852 - Domain of unknown function DUF1795 PFAM: Domain of unknown function DUF1795~KEGG: ypi:YpsIP31758_1354 hypothetical protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1466 YPK_1467 YPK_1467 YPK_1467 1619849 1621531 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: ypi:YpsIP31758_1355 OmpA domain protein gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1467 YPK_1468 YPK_1468 YPK_1468 1621532 1622233 - conserved hypothetical protein KEGG: yps:YPTB2677 hypothetical protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1468 YPK_1469 YPK_1469 YPK_1469 1622230 1623567 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1357 hypothetical protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1469 YPK_1470 YPK_1470 YPK_1470 1623607 1624638 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1358 hypothetical protein gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1470 YPK_1471 YPK_1471 YPK_1471 1624645 1625838 - ImpA domain protein PFAM: ImpA domain protein~KEGG: ypi:YpsIP31758_1359 ImpA domain protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1471 YPK_1472 YPK_1472 YPK_1472 1625937 1626962 - type VI secretion protein%2C VC_A0111 family TIGRFAM: type VI secretion protein%2C VC_A0111 family~PFAM: protein of unknown function DUF1305~KEGG: ypi:YpsIP31758_1360 hypothetical protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1472 YPK_1473 YPK_1473 YPK_1473 1626962 1628842 - type VI secretion protein%2C VC_A0110 family TIGRFAM: type VI secretion protein%2C VC_A0110 family~PFAM: protein of unknown function DUF879~KEGG: ypi:YpsIP31758_1361 hypothetical protein gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1473 YPK_1474 YPK_1474 YPK_1474 1629626 1632283 + type VI secretion ATPase%2C ClpV1 family KEGG: ypi:YpsIP31758_1362 Clp protease-associated protein ClpB~TIGRFAM: type VI secretion ATPase%2C ClpV1 family~PFAM: AAA ATPase central domain protein%3B Clp domain protein%3B ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1474 YPK_1475 YPK_1475 YPK_1475 1632494 1633039 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypm:YP_2572 putative fimbrial protein gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1475 YPK_1476 YPK_1476 YPK_1476 1633196 1633957 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: yps:YPTB2669 putative pili chaperone protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1476 YPK_1477 YPK_1477 YPK_1477 1634085 1636757 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: yps:YPTB2668 putative outer membrane fimbrial usher porin gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1477 YPK_1478 YPK_1478 YPK_1478 1636742 1637350 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypi:YpsIP31758_1366 fimbrial protein gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1478 YPK_1479 YPK_1479 YPK_1479 1637456 1637980 + type VI secretion protein%2C VC_A0107 family TIGRFAM: type VI secretion protein%2C VC_A0107 family~PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_1367 hypothetical protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1479 YPK_1480 YPK_1480 YPK_1480 1638004 1639506 + type VI secretion protein%2C EvpB/VC_A0108 family TIGRFAM: type VI secretion protein%2C EvpB/VC_A0108 family~PFAM: protein of unknown function DUF877~KEGG: ypi:YpsIP31758_1368 hypothetical protein gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1480 YPK_1481 YPK_1481 YPK_1481 1639755 1640324 + type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: yps:YPTB2664 hypothetical protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1481 YPK_1482 YPK_1482 YPK_1482 1640577 1641137 + conserved hypothetical protein KEGG: yps:YPTB2663 hypothetical protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1482 YPK_1483 YPK_1483 YPK_1483 1641141 1642490 + type VI secretion protein%2C VC_A0114 family TIGRFAM: type VI secretion protein%2C VC_A0114 family~PFAM: protein of unknown function DUF876~KEGG: ypi:YpsIP31758_1371 hypothetical protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1483 YPK_1484 YPK_1484 YPK_1484 1642487 1643863 + type VI secretion system OmpA/MotB family protein TIGRFAM: type IV / VI secretion system protein%2C DotU family%3B type VI secretion system OmpA/MotB family protein~PFAM: OmpA/MotB domain protein~KEGG: yps:YPTB2661 possible OmpA/MotB family protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1484 YPK_1485 YPK_1485 YPK_1485 1643872 1647699 + type VI secretion protein IcmF TIGRFAM: type VI secretion protein IcmF~PFAM: ImcF domain protein%3B protein of unknown function DUF1215~KEGG: ypi:YpsIP31758_1373 hypothetical protein gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1485 YPK_1486 YPK_1486 YPK_1486 1648026 1650794 + type VI secretion system Vgr family protein TIGRFAM: type VI secretion system Vgr family protein~PFAM: Rhs element Vgr protein~KEGG: ypi:YpsIP31758_1374 rhs element Vgr protein gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1486 YPK_1487 YPK_1487 YPK_1487 1650893 1651153 + conserved hypothetical protein KEGG: ypm:YP_2440 hypothetical protein gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1487 YPK_1488 YPK_1488 YPK_1488 1651153 1652001 + conserved hypothetical protein KEGG: yps:YPTB2657 hypothetical protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1488 YPK_1489 YPK_1489 YPK_1489 1652021 1652827 + virulence protein SciE type PFAM: virulence protein SciE type~KEGG: ypp:YPDSF_2033 hypothetical protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1489 YPK_1490 YPK_1490 YPK_1490 1652892 1653371 + type VI secretion system lysozyme-related protein TIGRFAM: type VI secretion system lysozyme-related protein~PFAM: GPW/gp25 family protein~KEGG: ypm:YP_2437 hypothetical protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1490 YPK_1491 YPK_1491 YPK_1491 1653396 1653743 + conserved hypothetical protein KEGG: ypk:y1562 hypothetical protein gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1491 YPK_1492 YPK_1492 YPK_1492 1653818 1654159 - alkylphosphonate utilization operon protein PhnA TIGRFAM: alkylphosphonate utilization operon protein PhnA~PFAM: PhnA protein~KEGG: ypi:YpsIP31758_1380 alkylphosphonate utilization operon protein PhnA gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1492 YPK_1493 YPK_1493 YPK_1493 1654535 1656574 - conserved hypothetical protein KEGG: yps:YPTB2652 hypothetical protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1493 YPK_1494 YPK_1494 YPK_1494 1656579 1657121 - LemA family protein PFAM: LemA family protein~KEGG: yps:YPTB2651 putative exported protein gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1494 YPK_1495 YPK_1495 YPK_1495 1657738 1658205 + conserved hypothetical protein KEGG: ypm:YP_2431 hypothetical protein gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1495 YPK_1496 YPK_1496 YPK_1496 1658650 1659306 + heme exporter protein CcmA KEGG: yps:YPTB2649 putative ABC type heme exporter%2C ATP binding subunit ccmA~TIGRFAM: heme exporter protein CcmA~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1496 YPK_1497 YPK_1497 YPK_1497 1659276 1659935 + heme exporter protein CcmB TIGRFAM: heme exporter protein CcmB~PFAM: cytochrome c-type biogenesis protein CcmB~KEGG: ypm:YP_2429 heme exporter protein B gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1497 YPK_1498 YPK_1498 YPK_1498 1659998 1660735 + heme exporter protein CcmC TIGRFAM: heme exporter protein CcmC~PFAM: cytochrome c assembly protein~KEGG: ypm:YP_2428 putative heme exporter protein C gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1498 YPK_1499 YPK_1499 YPK_1499 1660732 1661034 + heme exporter protein CcmD TIGRFAM: heme exporter protein CcmD~PFAM: Heme exporter protein D (CcmD)~KEGG: ypp:YPDSF_2023 heme exporter protein D gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1499 YPK_1500 YPK_1500 YPK_1500 1661031 1661525 + CcmE/CycJ protein PFAM: CcmE/CycJ protein~KEGG: ypi:YpsIP31758_1391 cytochrome c-type biogenesis protein CcmE gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1500 YPK_1501 YPK_1501 YPK_1501 1661522 1663492 + cytochrome c-type biogenesis protein CcmF TIGRFAM: cytochrome c-type biogenesis protein CcmF~PFAM: cytochrome c assembly protein~KEGG: ypi:YpsIP31758_1392 cytochrome c-type biogenesis protein CcmF gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1501 YPK_1502 YPK_1502 YPK_1502 1663489 1664055 + periplasmic protein thiol--disulphide oxidoreductase DsbE TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: ypi:YpsIP31758_1393 thiol:disulfide interchange protein DsbE gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1502 YPK_1503 YPK_1503 YPK_1503 1664052 1664564 + cytochrome C biogenesis protein PFAM: cytochrome C biogenesis protein~KEGG: ypi:YpsIP31758_1394 putative cytochrome c-type biogenesis protein gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1503 YPK_1504 YPK_1504 YPK_1504 1664564 1665790 + cytochrome c-type biogenesis protein CcmI TIGRFAM: cytochrome c-type biogenesis protein CcmI~PFAM: Tetratricopeptide TPR_2 repeat protein~KEGG: ypi:YpsIP31758_1395 cytochrome c-type biogenesis protein CcmI gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1504 YPK_1505 YPK_1505 YPK_1505 1665826 1666590 + VacJ family lipoprotein PFAM: VacJ family lipoprotein~KEGG: ypm:YP_2421 lipoprotein precursor gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1505 YPK_1506 YPK_1506 YPK_1506 1666697 1667962 - membrane protein involved in aromatic hydrocarbon degradation PFAM: membrane protein involved in aromatic hydrocarbon degradation~KEGG: ypi:YpsIP31758_1397 long-chain fatty acid transport protein gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1506 YPK_1507 YPK_1507 YPK_1507 1668376 1668672 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_1398 conserved hypothetical protein TIGR00743 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1507 YPK_1508 YPK_1508 YPK_1508 1668959 1670269 + acetyl-CoA C-acyltransferase FadI KEGG: ypm:YP_2418 putative 3-ketoacyl-CoA thiolase~TIGRFAM: acetyl-CoA acetyltransferase%3B acetyl-CoA C-acyltransferase FadI~PFAM: Thiolase gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1508 YPK_1509 YPK_1509 YPK_1509 1670269 1672593 + fatty acid oxidation complex%2C alpha subunit FadJ TIGRFAM: fatty acid oxidation complex%2C alpha subunit FadJ~PFAM: Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein%3B 3-hydroxyacyl-CoA dehydrogenase NAD-binding~KEGG: ypp:YPDSF_2013 fatty oxidation complex alpha subunit%2C enoyl-CoA hydratase gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1509 YPK_1510 YPK_1510 YPK_1510 1673049 1673207 + conserved hypothetical protein KEGG: ypk:y1581 hypothetical protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1510 YPK_1511 YPK_1511 YPK_1511 1673194 1673670 + phosphohistidine phosphatase%2C SixA TIGRFAM: phosphohistidine phosphatase SixA~PFAM: Phosphoglycerate mutase~KEGG: ypi:YpsIP31758_1402 phosphohistidine phosphatase SixA gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1511 YPK_1512 YPK_1512 YPK_1512 1673922 1674533 - Smr protein/MutS2 PFAM: Smr protein/MutS2~KEGG: ypm:YP_2414 hypothetical protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1512 YPK_1513 YPK_1513 YPK_1513 1674822 1675754 + protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific KEGG: yps:YPTB2633 conserved hypothetical protein~TIGRFAM: modification methylase%2C HemK family%3B protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific~PFAM: methyltransferase small gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1513 YPK_1514 YPK_1514 YPK_1514 1675831 1676916 + Chorismate synthase PFAM: chorismate synthase~KEGG: ypm:YP_2412 chorismate synthase gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1514 YPK_1515 YPK_1515 YPK_1515 1676943 1677749 + peptidase U6 penicillin-insensitive murein endopeptidase PFAM: peptidase U6 penicillin-insensitive murein endopeptidase~KEGG: ypm:YP_2411 putative penicillin-insensitive murein endopeptidase gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1515 YPK_1516 YPK_1516 YPK_1516 1677753 1678559 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: ypm:YP_2410 putative membrane protein gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1516 YPK_1517 YPK_1517 YPK_1517 1678659 1679201 + protein of unknown function DUF462 PFAM: protein of unknown function DUF462~KEGG: ypi:YpsIP31758_1408 hypothetical protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1517 YPK_1518 YPK_1518 YPK_1518 1679259 1679537 + YfcL protein PFAM: YfcL protein~KEGG: ypi:YpsIP31758_1409 hypothetical protein gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1518 YPK_1519 YPK_1519 YPK_1519 1679715 1681784 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC~PFAM: FAD dependent oxidoreductase%3B protein of unknown function DUF752~KEGG: ypk:y1590 putative peptidase gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1519 YPK_1520 YPK_1520 YPK_1520 1681956 1683179 + Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: ypi:YpsIP31758_1411 3-oxoacyl-(acyl-carrier-protein) synthase I gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1520 YPK_1521 YPK_1521 YPK_1521 1683587 1684282 - aspartate racemase TIGRFAM: aspartate racemase~PFAM: Asp/Glu/hydantoin racemase~KEGG: ypi:YpsIP31758_1412 aspartate racemase family protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1521 YPK_1522 YPK_1522 YPK_1522 1685070 1685600 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypi:YpsIP31758_1413 fimbria protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1522 YPK_1523 YPK_1523 YPK_1523 1686127 1687164 - Div-like protein KEGG: ypi:YpsIP31758_1414 Div-like protein gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1523 YPK_1524 YPK_1524 YPK_1524 1687449 1688366 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: yps:YPTB2622 putative DMT superfamily drug/metabolite efflux protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1524 YPK_1525 YPK_1525 YPK_1525 1688437 1688565 - hypothetical protein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1525 YPK_1526 YPK_1526 YPK_1526 1688592 1689377 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B Cupin 2 conserved barrel domain protein~KEGG: yps:YPTB2621 putative AraC-family regulatory protein gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1526 YPK_1527 YPK_1527 YPK_1527 1689424 1690551 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: yps:YPTB2620 putative D-isomer specific 2-hydroxyacid dehydrogenase gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1527 YPK_1528 YPK_1528 YPK_1528 1690721 1691731 + Aspartate-semialdehyde dehydrogenase PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region~KEGG: ypi:YpsIP31758_1419 aspartate-semialdehyde dehydrogenase family protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1528 YPK_1529 YPK_1529 YPK_1529 1691731 1692612 + tRNA pseudouridine synthase A KEGG: ypp:YPDSF_1995 tRNA pseudouridine synthase A~TIGRFAM: tRNA pseudouridine synthase A~PFAM: tRNA pseudouridine synthase gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1529 YPK_1530 YPK_1530 YPK_1530 1692769 1693431 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ypi:YpsIP31758_1421 DedA protein gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1530 YPK_1531 YPK_1531 YPK_1531 1693662 1694576 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~KEGG: ypi:YpsIP31758_1422 acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1531 YPK_1532 YPK_1532 YPK_1532 1694825 1696129 + FolC bifunctional protein TIGRFAM: FolC bifunctional protein~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: ypm:YP_2395 putative FolC bifunctional protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1532 YPK_1533 YPK_1533 YPK_1533 1696249 1696986 + Phosphogluconate dehydratase PFAM: Sporulation domain protein~KEGG: ypm:YP_2394 putative membrane protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1533 YPK_1534 YPK_1534 YPK_1534 1697314 1697823 + Colicin V production protein PFAM: Colicin V production protein~KEGG: ypm:YP_2393 putative colicin V production protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1534 YPK_1535 YPK_1535 YPK_1535 1697836 1699353 + amidophosphoribosyltransferase TIGRFAM: amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase~KEGG: ypm:YP_2392 amidophosphoribosyltransferase gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1535 YPK_1536 YPK_1536 YPK_1536 1699614 1700186 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: flavoprotein~KEGG: ypi:YpsIP31758_1427 3-octaprenyl-4-hydroxybenzoate carboxy-lyase gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1536 YPK_1537 YPK_1537 YPK_1537 1700183 1700290 - hypothetical protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1537 YPK_1538 YPK_1538 YPK_1538 1700733 1701515 + cationic amino acid ABC transporter%2C periplasmic binding protein TIGRFAM: cationic amino acid ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 3~KEGG: ypi:YpsIP31758_1428 histidine ABC transporter%2C periplasmic histidine-binding protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1538 YPK_1539 YPK_1539 YPK_1539 1701611 1702297 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1429 histidine ABC transporter%2C permease protein HisQ gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1539 YPK_1540 YPK_1540 YPK_1540 1702294 1703010 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2388 histidine transport system permease protein HisM gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1540 YPK_1541 YPK_1541 YPK_1541 1703024 1703821 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2387 histidine transport ATP-binding protein HisP gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1541 YPK_1542 YPK_1542 YPK_1542 1703945 1704853 - domain of unknown function DUF1731 PFAM: NAD-dependent epimerase/dehydratase%3B dTDP-4-dehydrorhamnose reductase%3B domain of unknown function DUF1731~KEGG: ypi:YpsIP31758_1432 NAD dependent epimerase/dehydratase family protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1542 YPK_1543 YPK_1543 YPK_1543 1705207 1705899 + diguanylate phosphodiesterase PFAM: EAL domain protein~KEGG: yps:YPTB2605 hypothetical protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1543 YPK_1544 YPK_1544 YPK_1544 1706087 1706638 + phosphodiesterase%2C MJ0936 family TIGRFAM: phosphodiesterase%2C MJ0936 family~PFAM: metallophosphoesterase~KEGG: ypi:YpsIP31758_1434 phosphodiesterase%2C MJ0936 family gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1544 YPK_1545 YPK_1545 YPK_1545 1706860 1707408 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_1436 hydrolase%2C NUDIX family gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1545 YPK_1546 YPK_1546 YPK_1546 1707525 1708781 - putative sugar-specific permease SgaT/UlaA PFAM: putative sugar-specific permease SgaT/UlaA~KEGG: ypi:YpsIP31758_1437 putative sugar-specific permease%2C SgaT/UlaA family gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1546 YPK_1547 YPK_1547 YPK_1547 1708794 1709081 - phosphotransferase system lactose/cellobiose-specific IIB subunit PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit~KEGG: ypi:YpsIP31758_1438 PTS system%2C lactose/cellobiose specific IIB subunit gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1547 YPK_1548 YPK_1548 YPK_1548 1709250 1709693 - putative PTS IIA-like nitrogen-regulatory protein PtsN PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~KEGG: ypi:YpsIP31758_1440 mannitol-specific cryptic phosphotransferase enzyme IIA component gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1548 YPK_1549 YPK_1549 YPK_1549 1710060 1711094 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_2379 putative transcriptional regulator gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1549 YPK_1550 YPK_1550 YPK_1550 1711361 1713514 - phosphate acetyltransferase KEGG: ypi:YpsIP31758_1442 phosphate acetyltransferase~TIGRFAM: phosphate acetyltransferase~PFAM: phosphate acetyl/butaryl transferase%3B DRTGG domain protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1550 YPK_1551 YPK_1551 YPK_1551 1713682 1714884 - acetate kinase TIGRFAM: acetate kinase~PFAM: acetate and butyrate kinase~KEGG: yps:YPTB2597 acetate/propionate kinase gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1551 YPK_1552 YPK_1552 YPK_1552 1715306 1715761 + protein of unknown function DUF412 PFAM: protein of unknown function DUF412~KEGG: ypi:YpsIP31758_1444 hypothetical protein gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1552 YPK_1553 YPK_1553 YPK_1553 1716069 1716563 + YfbU family protein PFAM: YfbU family protein~KEGG: ypi:YpsIP31758_1445 YfbU domain protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1553 YPK_1554 YPK_1554 YPK_1554 1716729 1717385 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypm:YP_2373 putative haloacid dehalogenase-like hydrolase gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1554 YPK_1555 YPK_1555 YPK_1555 1717677 1719509 + Citrate transporter PFAM: Citrate transporter%3B TrkA-C domain protein%3B TRAP C4-dicarboxylate transport system permease DctM subunit~KEGG: yps:YPTB2592 probable sodium:sulfate symporter gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1555 YPK_1556 YPK_1556 YPK_1556 1719933 1720175 + conserved hypothetical protein KEGG: yps:YPTB2591 hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1556 YPK_1557 YPK_1557 YPK_1557 1720222 1720815 - metal dependent phosphohydrolase KEGG: ypi:YpsIP31758_1449 5'-nucleotidase YfbR~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1557 YPK_1558 YPK_1558 YPK_1558 1720966 1722180 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_1450 aminotransferase%2C class I and II gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1558 YPK_1559 YPK_1559 YPK_1559 1723035 1723967 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypk:y1629 NADH dehydrogenase transcriptional regulator%2C LysR family gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1559 YPK_1560 YPK_1560 YPK_1560 1724645 1725145 + NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: ypm:YP_2366 NADH dehydrogenase I chain A gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1560 YPK_1561 YPK_1561 YPK_1561 1725247 1725924 + NADH-quinone oxidoreductase%2C B subunit KEGG: ypm:YP_2365 NADH dehydrogenase I chain B~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1561 YPK_1562 YPK_1562 YPK_1562 1726067 1727863 + NADH dehydrogenase I%2C D subunit TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C%3B NADH dehydrogenase I%2C D subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa%3B NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: ypi:YpsIP31758_1456 NADH-quinone oxidoreductase%2C C/D subunit gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1562 YPK_1563 YPK_1563 YPK_1563 1727866 1728429 + NADH-quinone oxidoreductase%2C E subunit TIGRFAM: NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~KEGG: yps:YPTB2584 NADH dehydrogenase I chain E gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1563 YPK_1564 YPK_1564 YPK_1564 1728426 1729811 + NADH-quinone oxidoreductase%2C F subunit KEGG: ypi:YpsIP31758_1458 NADH-quinone oxidoreductase%2C F subunit~TIGRFAM: NADH-quinone oxidoreductase%2C F subunit~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1564 YPK_1565 YPK_1565 YPK_1565 1729898 1732642 + NADH-quinone oxidoreductase%2C chain G TIGRFAM: NADH-quinone oxidoreductase%2C chain G~PFAM: ferredoxin%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: ypi:YpsIP31758_1459 NADH-quinone oxidoreductase%2C G subunit gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1565 YPK_1566 YPK_1566 YPK_1566 1732639 1733616 + NADH dehydrogenase (quinone) PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: ypm:YP_2360 NADH dehydrogenase I chain H gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1566 YPK_1567 YPK_1567 YPK_1567 1733631 1734173 + NADH-quinone oxidoreductase%2C chain I TIGRFAM: NADH-quinone oxidoreductase%2C chain I~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_1461 NADH-quinone oxidoreductase%2C I subunit gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1567 YPK_1568 YPK_1568 YPK_1568 1734186 1734731 + NADH dehydrogenase (quinone) PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: ypm:YP_2358 NADH dehydrogenase I chain J gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1568 YPK_1569 YPK_1569 YPK_1569 1734728 1735030 + NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: ypm:YP_2357 NADH dehydrogenase I chain k gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1569 YPK_1570 YPK_1570 YPK_1570 1735027 1736871 + proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: ypi:YpsIP31758_1464 NADH-quinone oxidoreductase%2C L subunit~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein%3B NADH/Ubiquinone/plastoquinone (complex I) gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1570 YPK_1571 YPK_1571 YPK_1571 1736911 1738443 + proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: ypp:YPDSF_1954 NADH dehydrogenase I chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1571 YPK_1572 YPK_1572 YPK_1572 1738450 1739913 + proton-translocating NADH-quinone oxidoreductase%2C chain N KEGG: ypm:YP_2354 NADH dehydrogenase I chain N~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1572 YPK_1573 YPK_1573 YPK_1573 1740149 1741228 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1467 hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1573 YPK_1574 YPK_1574 YPK_1574 1741700 1742167 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_1468 hypothetical protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1574 YPK_1575 YPK_1575 YPK_1575 1742245 1742781 - carbohydrate kinase%2C thermoresistant glucokinase family KEGG: yps:YPTB2572 putative thermosensitive gluconokinase~TIGRFAM: carbohydrate kinase%2C thermoresistant glucokinase family~PFAM: shikimate kinase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1575 YPK_1576 YPK_1576 YPK_1576 1742830 1743699 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ypm:YP_2350 gluconate 5-dehydrogenase gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1576 YPK_1577 YPK_1577 YPK_1577 1744353 1745636 - protein of unknown function DUF187 PFAM: protein of unknown function DUF187~KEGG: ypi:YpsIP31758_1472 putative lipoprotein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1577 YPK_1578 YPK_1578 YPK_1578 1746105 1747097 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_2348 putative LacI-family transcriptional regulatory protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1578 YPK_1579 YPK_1579 YPK_1579 1747561 1748511 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: yps:YPTB2568 putative D-isomer specific 2-hydroxyacid dehydrogenase family gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1579 YPK_1580 YPK_1580 YPK_1580 1748874 1750190 + major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: yps:YPTB2567 putative 2-ketogluconate transporter%2C ACS family-MFS superfamily gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1580 YPK_1581 YPK_1581 YPK_1581 1750220 1750735 + protein of unknown function DUF336 PFAM: protein of unknown function DUF336~KEGG: ypk:y1653 hypothetical protein gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1581 YPK_1582 YPK_1582 YPK_1582 1750745 1752601 + 6-phosphogluconate dehydratase KEGG: ypm:YP_2344 phosphogluconate dehydratase~TIGRFAM: 6-phosphogluconate dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1582 YPK_1583 YPK_1583 YPK_1583 1752739 1752879 + conserved hypothetical protein KEGG: yps:YPTB2564 hypothetical protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1583 YPK_1584 YPK_1584 YPK_1584 1752820 1752963 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1477 hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1584 YPK_1585 YPK_1585 YPK_1585 1753531 1753839 + protein of unknown function DUF883 ElaB PFAM: protein of unknown function DUF883 ElaB~KEGG: ypi:YpsIP31758_1479 hypothetical protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1585 YPK_1586 YPK_1586 YPK_1586 1754394 1755038 + protein RhiA KEGG: ypi:YpsIP31758_1480 protein RhiA gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1586 YPK_1587 YPK_1587 YPK_1587 1755291 1755386 + hypothetical protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1587 YPK_1588 YPK_1588 YPK_1588 1755611 1756978 + isochorismate synthase TIGRFAM: isochorismate synthase~PFAM: Chorismate binding-like~KEGG: yps:YPTB2561 menaquinone-specific isochorismate synthase gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1588 YPK_1589 YPK_1589 YPK_1589 1757206 1758909 + 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TIGRFAM: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase~KEGG: yps:YPTB2560 2-oxoglutarate decarboxylase / 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1589 YPK_1590 YPK_1590 YPK_1590 1758906 1759724 + alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold~KEGG: yps:YPTB2559 hypothetical protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1590 YPK_1591 YPK_1591 YPK_1591 1759738 1760595 + naphthoate synthase TIGRFAM: naphthoate synthase~PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ypi:YpsIP31758_1484 naphthoate synthase gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1591 YPK_1592 YPK_1592 YPK_1592 1760595 1761566 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ypp:YPDSF_1934 O-succinylbenzoate-CoA synthase gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1592 YPK_1593 YPK_1593 YPK_1593 1761554 1762969 + O-succinylbenzoate-CoA ligase TIGRFAM: O-succinylbenzoate-CoA ligase~PFAM: AMP-dependent synthetase and ligase~KEGG: ypp:YPDSF_1933 O-succinylbenzoic acid--CoA ligase gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1593 YPK_1594 YPK_1594 YPK_1594 1763035 1763994 + glycosyl transferase family 3 PFAM: glycosyl transferase family 3~KEGG: yps:YPTB2555 hypothetical protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1594 YPK_1595 YPK_1595 YPK_1595 1764376 1764636 - protein of unknown function DUF1471 PFAM: protein of unknown function DUF1471~KEGG: yps:YPTB2554 hypothetical protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1595 YPK_1596 YPK_1596 YPK_1596 1764969 1765934 + protein of unknown function DUF890 PFAM: protein of unknown function DUF890~KEGG: ypi:YpsIP31758_1491 hypothetical protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1596 YPK_1597 YPK_1597 YPK_1597 1766700 1768004 + methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor KEGG: yps:YPTB2551 putative chemotactic transducer~TIGRFAM: PAS sensor protein~PFAM: chemotaxis sensory transducer%3B PAS fold-3 domain protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein%3B PAC repeat-containing protein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1597 YPK_1598 YPK_1598 YPK_1598 1768232 1768954 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypp:YPDSF_1926 glutamine transport ATP-binding protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1598 YPK_1599 YPK_1599 YPK_1599 1768951 1769607 - polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1494 glutamine ABC transporter%2C permease protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1599 YPK_1600 YPK_1600 YPK_1600 1769642 1770385 - cationic amino acid ABC transporter%2C periplasmic binding protein KEGG: ypp:YPDSF_1924 glutamine-binding periplasmic protein~TIGRFAM: cationic amino acid ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 3~SMART: ionotropic glutamate receptor gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1600 YPK_1601 YPK_1601 YPK_1601 1770954 1772081 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: ypi:YpsIP31758_1496 hypothetical protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1601 YPK_1602 YPK_1602 YPK_1602 1772401 1772904 - Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: ypi:YpsIP31758_1497 ferritin family protein gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1602 YPK_1603 YPK_1603 YPK_1603 1773161 1773937 - Trans-aconitate 2-methyltransferase PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: yps:YPTB2545 trans-aconitate 2-methyltransferase gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1603 YPK_1604 YPK_1604 YPK_1604 1773960 1774457 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: yps:YPTB2544 hypothetical protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1604 YPK_1605 YPK_1605 YPK_1605 1774473 1775360 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypi:YpsIP31758_1500 integral membrane protein gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1605 YPK_1606 YPK_1606 YPK_1606 1775765 1776289 + virulence-related outer membrane protein PFAM: virulence-related outer membrane protein~KEGG: ypi:YpsIP31758_1501 outer membrane protein X gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1606 YPK_1607 YPK_1607 YPK_1607 1776605 1777543 + cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: ypp:YPDSF_1917 membrane protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1607 YPK_1608 YPK_1608 YPK_1608 1777781 1778323 + conserved hypothetical protein KEGG: ypp:YPDSF_1916 hypothetical protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1608 YPK_1609 YPK_1609 YPK_1609 1778517 1779179 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1505 hypothetical protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1609 YPK_1610 YPK_1610 YPK_1610 1779850 1781076 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: yps:YPTB2538 putative sorbitol dehydrogenase gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1610 YPK_1611 YPK_1611 YPK_1611 1781251 1782168 + Monosaccharide-transporting ATPase PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_2316 sugar binding protein precursor gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1611 YPK_1612 YPK_1612 YPK_1612 1782225 1783715 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1508 ribose ABC transporter%2C ATP-binding protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1612 YPK_1613 YPK_1613 YPK_1613 1783712 1784704 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypm:YP_2314 putative sugar transport system%2C permease protein gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1613 YPK_1614 YPK_1614 YPK_1614 1784854 1785858 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_1510 sugar-binding transcriptional regulator%2C LacI family gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1614 YPK_1615 YPK_1615 YPK_1615 1786229 1787170 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: yps:YPTB2533 putativeLlysR-family transcriptional regulatory protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1615 YPK_1616 YPK_1616 YPK_1616 1787273 1788358 + tartrate dehydrogenase KEGG: ypi:YpsIP31758_1512 tartrate dehydrogenase~TIGRFAM: tartrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1616 YPK_1617 YPK_1617 YPK_1617 1788497 1788610 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1513 hypothetical protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1617 YPK_1618 YPK_1618 YPK_1618 1788976 1790622 + cyclic nucleotide-binding protein TIGRFAM: choline/carnitine/betaine transporter~PFAM: BCCT transporter~KEGG: ypm:YP_2309 putative quarternary ammonium transport protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1618 YPK_1619 YPK_1619 YPK_1619 1790739 1791863 + Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: ypi:YpsIP31758_1516 rieske 2Fe-2S domain protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1619 YPK_1620 YPK_1620 YPK_1620 1791959 1792924 + ferredoxin PFAM: ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypp:YPDSF_1904 dioxygenase beta subunit gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1620 YPK_1621 YPK_1621 YPK_1621 1793572 1795260 + Polypeptide-transport-associated domain protein ShlB-type PFAM: Hemolysin activator HlyB domain protein%3B Polypeptide-transport-associated domain protein ShlB-type~KEGG: ypm:YP_2306 putative hemolysin activator protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1621 YPK_1622 YPK_1622 YPK_1622 1795416 1803053 + filamentous haemagglutinin family outer membrane protein TIGRFAM: filamentous haemagglutinin family outer membrane protein%3B adhesin HecA family~PFAM: Haemagluttinin repeat-containing protein%3B filamentous haemagglutinin domain protein~KEGG: yps:YPTB2527 putative hemolysin gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1622 YPK_1623 YPK_1623 YPK_1623 1803050 1803364 + conserved hypothetical protein KEGG: plu:plu3700 hypothetical protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1623 YPK_1624 YPK_1624 YPK_1624 1803665 1803931 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1624 YPK_1625 YPK_1625 YPK_1625 1804172 1805227 + hypothetical protein KEGG: ypi:YpsIP31758_0514 hypothetical protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1625 YPK_1626 YPK_1626 YPK_1626 1805230 1805451 + conserved hypothetical protein KEGG: plu:plu3576 hypothetical protein gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1626 YPK_1627 YPK_1627 YPK_1627 1805496 1805651 - hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1627 YPK_1628 YPK_1628 YPK_1628 1805723 1806124 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~KEGG: eca:ECA4290 putative phage regulatory protein gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1628 YPK_1629 YPK_1629 YPK_1629 1806243 1806662 + conserved hypothetical protein KEGG: ypp:YPDSF_1899 hypothetical protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1629 YPK_1630 YPK_1630 YPK_1630 1806703 1807233 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1522 hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1630 YPK_1631 YPK_1631 YPK_1631 1807498 1808577 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1524 carbohydrate uptake (CUT1 family) ABC transporter%2C ATP-binding protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1631 YPK_1632 YPK_1632 YPK_1632 1808677 1810065 - Phosphomannomutase PFAM: phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III~KEGG: ypm:YP_2298 phosphomannomutase gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1632 YPK_1633 YPK_1633 YPK_1633 1810082 1811122 - transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: ypm:YP_2297 LacI-family transcriptional regulatory protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1633 YPK_1634 YPK_1634 YPK_1634 1811394 1812680 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_1527 carbohydrate uptake (CUT1 family) ABC transporter%2C periplasmic carbohydrate-binding protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1634 YPK_1635 YPK_1635 YPK_1635 1812789 1813664 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1528 carbohydrate uptake (CUT1 family) ABC transporter%2C permease protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1635 YPK_1636 YPK_1636 YPK_1636 1813665 1814489 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2294 sugar ABC transporter%2C permease protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1636 YPK_1637 YPK_1637 YPK_1637 1814636 1815691 + glycosidase PH1107-related PFAM: glycosidase PH1107-related~KEGG: ypi:YpsIP31758_1530 hypothetical protein gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1637 YPK_1638 YPK_1638 YPK_1638 1815718 1816656 + Protein of unknown function DUF1861 PFAM: Protein of unknown function DUF1861~KEGG: ypi:YpsIP31758_1531 hypothetical protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1638 YPK_1639 YPK_1639 YPK_1639 1816779 1817894 + conserved hypothetical protein KEGG: yps:YPTB2513 hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1639 YPK_1640 YPK_1640 YPK_1640 1817933 1819207 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1533 hypothetical protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1640 YPK_1641 YPK_1641 YPK_1641 1819765 1821009 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ypm:YP_2288 hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1641 YPK_1642 YPK_1642 YPK_1642 1823010 1823249 + conserved hypothetical protein KEGG: plu:plu1782 hypothetical protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1642 YPK_1643 YPK_1643 YPK_1643 1823662 1824222 - hypothetical protein KEGG: eca:ECA3676 hypothetical protein gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1643 YPK_1644 YPK_1644 YPK_1644 1824498 1825478 + CRISPR-associated protein Cas1 TIGRFAM: CRISPR-associated protein Cas1~KEGG: ypi:YpsIP31758_1535 crispr-associated protein Cas1 gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1644 YPK_1645 YPK_1645 YPK_1645 1825475 1828762 + CRISPR-associated helicase Cas3 family TIGRFAM: CRISPR-associated helicase Cas3 family~KEGG: ypp:YPDSF_1881 hypothetical protein gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1645 YPK_1646 YPK_1646 YPK_1646 1828918 1830264 + CRISPR-associated protein%2C Csy1 family TIGRFAM: CRISPR-associated protein%2C Csy1 family~PFAM: CRISPR-associated protein Csy1~KEGG: ypi:YpsIP31758_1537 crispr-associated protein%2C Csy1 family gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1646 YPK_1647 YPK_1647 YPK_1647 1830261 1831211 + CRISPR-associated protein%2C Csy2 family TIGRFAM: CRISPR-associated protein%2C Csy2 family~PFAM: CRISPR-associated protein Csy2~KEGG: yps:YPTB2507 hypothetical protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1647 YPK_1648 YPK_1648 YPK_1648 1831229 1832233 + CRISPR-associated protein%2C Csy3 family TIGRFAM: CRISPR-associated protein%2C Csy3 family~PFAM: CRISPR-associated protein Csy3~KEGG: yps:YPTB2506 hypothetical protein gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1648 YPK_1649 YPK_1649 YPK_1649 1832244 1832798 + CRISPR-associated protein%2C Csy4 family TIGRFAM: CRISPR-associated protein%2C Csy4 family~PFAM: CRISPR-associated protein Csy4~KEGG: ypi:YpsIP31758_1540 crispr-associated protein%2C Csy4 family gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1649 YPK_1650 YPK_1650 YPK_1650 1832876 1833895 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ypi:YpsIP31758_1541 oxidoreductase%2C aldo/keto reductase family gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1650 YPK_1651 YPK_1651 YPK_1651 1833906 1834409 - formaldehyde-activating enzyme TIGRFAM: formaldehyde-activating enzyme~PFAM: Formaldehyde-activating enzyme (Fae)~KEGG: ypi:YpsIP31758_1542 hypothetical protein gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1651 YPK_1652 YPK_1652 YPK_1652 1834456 1835814 - General substrate transporter PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypm:YP_2278 putative transporter protein gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1652 YPK_1653 YPK_1653 YPK_1653 1835938 1836147 + hypothetical protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1653 YPK_1654 YPK_1654 YPK_1654 1836262 1837188 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_1545 substrate-binding transcriptional regulator%2C LysR family gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1654 YPK_1655 YPK_1655 YPK_1655 1837676 1838413 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Autoinducer-binding domain protein~KEGG: ypi:YpsIP31758_1547 transcriptional regulator%2C LuxR family gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1655 YPK_1656 YPK_1656 YPK_1656 1838406 1839050 - autoinducer synthesis protein PFAM: autoinducer synthesis protein~KEGG: ypi:YpsIP31758_1546 N-acylhomoserine lactone synthase YpsI gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1656 YPK_1657 YPK_1657 YPK_1657 1839481 1840407 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypi:YpsIP31758_1548 integral membrane protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1657 YPK_1658 YPK_1658 YPK_1658 1840539 1842266 - sodium/hydrogen exchanger PFAM: transporter-associated region%3B TrkA-C domain protein%3B sodium/hydrogen exchanger~KEGG: ypi:YpsIP31758_1549 transporter%2C monovalent cation:proton antiporter-2 (CPA2) family gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1658 YPK_1659 YPK_1659 YPK_1659 1842610 1842855 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1550 hypothetical protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1659 YPK_1660 YPK_1660 YPK_1660 1843415 1843798 - osmoregulated periplasmic glucan biosynthetic protein KEGG: yen:YE1604 osmoregulated periplasmic glucan biosynthetic protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1660 YPK_1661 YPK_1661 YPK_1661 1844284 1845870 + periplasmic glucan biosynthesis protein MdoG PFAM: periplasmic glucan biosynthesis protein MdoG~KEGG: yps:YPTB2494 periplasmic glucans biosynthesis protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1661 YPK_1662 YPK_1662 YPK_1662 1845863 1848472 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: yps:YPTB2493 membrane glycosyltransferase gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1662 YPK_1663 YPK_1663 YPK_1663 1848505 1848837 + protein of unknown function DUF1375 PFAM: protein of unknown function DUF1375~KEGG: yps:YPTB2492 hypothetical protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1663 YPK_1664 YPK_1664 YPK_1664 1849016 1850554 - amino acid/peptide transporter KEGG: ypi:YpsIP31758_1555 proton dependent peptide transporter~TIGRFAM: amino acid/peptide transporter~PFAM: TGF-beta receptor type I/II extracellular region%3B major facilitator superfamily MFS_1 gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1664 YPK_1665 YPK_1665 YPK_1665 1851258 1852178 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase~PFAM: lipid A biosynthesis acyltransferase~KEGG: ypi:YpsIP31758_1556 lipid A biosynthesis lauroyl acyltransferase gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1665 YPK_1666 YPK_1666 YPK_1666 1853113 1853277 + conserved hypothetical protein KEGG: ypm:YP_2272 hypothetical protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1666 YPK_1667 YPK_1667 YPK_1667 1853464 1853592 + conserved hypothetical protein KEGG: ype:YPO2452 hypothetical protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1667 YPK_1668 YPK_1668 YPK_1668 1853636 1854703 + Rhodanese domain protein PFAM: Rhodanese domain protein~KEGG: ypm:YP_2271 uncharacterized enzyme related to sulfurtransferases gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1668 YPK_1669 YPK_1669 YPK_1669 1854852 1855910 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: ypm:YP_2270 hypothetical protein gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1669 YPK_1670 YPK_1670 YPK_1670 1856025 1856138 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1562 hypothetical protein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1670 YPK_1671 YPK_1671 YPK_1671 1856482 1857066 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~KEGG: ypi:YpsIP31758_1563 transcriptional regulator%2C LuxR family gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1671 YPK_1672 YPK_1672 YPK_1672 1857333 1858448 - Sarcosine oxidase PFAM: FAD dependent oxidoreductase~KEGG: ypm:YP_2268 putative sarcosine oxidase gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1672 YPK_1673 YPK_1673 YPK_1673 1858699 1858953 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1565 hypothetical protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1673 YPK_1674 YPK_1674 YPK_1674 1859459 1859704 - DinI family protein PFAM: DinI family protein~KEGG: ypi:YpsIP31758_1566 DNA-damage-inducible protein I gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1674 YPK_1675 YPK_1675 YPK_1675 1860017 1861063 - dihydroorotase%2C homodimeric type KEGG: ypi:YpsIP31758_1567 dihydroorotase%2C homodimeric type~TIGRFAM: dihydroorotase%2C homodimeric type~PFAM: amidohydrolase gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1675 YPK_1676 YPK_1676 YPK_1676 1861298 1861585 + Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: ypi:YpsIP31758_1568 antibiotic biosynthesis monooxygenase domain protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1676 YPK_1677 YPK_1677 YPK_1677 1861843 1865493 - ribonuclease%2C Rne/Rng family TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: RNA binding S1 domain protein~KEGG: ypi:YpsIP31758_1569 ribonuclease E gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1677 YPK_1678 YPK_1678 YPK_1678 1866068 1867030 + pseudouridine synthase%2C RluA family KEGG: yps:YPTB2478 ribosomal large subunit pseudouridine synthase C~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1678 YPK_1679 YPK_1679 YPK_1679 1867250 1867708 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1679 YPK_1680 YPK_1680 YPK_1680 1867846 1868442 - maf protein TIGRFAM: maf protein~PFAM: Maf family protein~KEGG: yps:YPTB2477 Maf-like protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1680 YPK_1681 YPK_1681 YPK_1681 1868584 1869108 + protein of unknown function DUF177 PFAM: protein of unknown function DUF177~KEGG: ypi:YpsIP31758_1573 hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1681 YPK_1682 YPK_1682 YPK_1682 1869121 1869288 + ribosomal protein L32 TIGRFAM: ribosomal protein L32~PFAM: ribosomal L32p protein~KEGG: yen:YE1631 50S ribosomal protein L32 gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1682 YPK_1683 YPK_1683 YPK_1683 1869322 1870356 + fatty acid/phospholipid synthesis protein PlsX TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~PFAM: fatty acid synthesis plsX protein~KEGG: ypm:YP_2258 fatty acid/phospholipid synthesis protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1683 YPK_1684 YPK_1684 YPK_1684 1870363 1871313 + 3-oxoacyl-(acyl-carrier-protein) synthase III KEGG: ypm:YP_2257 3-oxoacyl-[acyl-carrier-protein] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1684 YPK_1685 YPK_1685 YPK_1685 1871351 1872280 + malonyl CoA-acyl carrier protein transacylase TIGRFAM: malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase~KEGG: yps:YPTB2472 acyl carrier protein S-malonyltransferase gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1685 YPK_1686 YPK_1686 YPK_1686 1872294 1873028 + 3-oxoacyl-(acyl-carrier-protein) reductase TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR%3B Male sterility domain%3B KR domain protein~KEGG: ypm:YP_2255 3-oxoacyl-[acyl-carrier protein] reductase gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1686 YPK_1687 YPK_1687 YPK_1687 1873182 1873418 + acyl carrier protein TIGRFAM: acyl carrier protein~PFAM: phosphopantetheine-binding~KEGG: yen:YE1636 acyl carrier protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1687 YPK_1688 YPK_1688 YPK_1688 1873513 1874754 + 3-oxoacyl-(acyl-carrier-protein) synthase 2 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase~KEGG: ypm:YP_2253 3-oxoacyl-[acyl-carrier-protein] synthase II gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1688 YPK_1689 YPK_1689 YPK_1689 1875116 1875922 + aminodeoxychorismate lyase TIGRFAM: aminodeoxychorismate lyase~PFAM: aminotransferase class IV~KEGG: yps:YPTB2468 4-amino-4-deoxychorismate lyase gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1689 YPK_1690 YPK_1690 YPK_1690 1876211 1877236 + aminodeoxychorismate lyase PFAM: aminodeoxychorismate lyase~KEGG: yps:YPTB2467 hypothetical protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1690 YPK_1691 YPK_1691 YPK_1691 1877226 1877864 + dTMP kinase PFAM: thymidylate kinase~KEGG: ypp:YPDSF_1842 thymidylate kinase gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1691 YPK_1692 YPK_1692 YPK_1692 1877864 1878886 + DNA polymerase III%2C delta prime subunit KEGG: ypp:YPDSF_1841 DNA polymerase III%2C delta' subunit~TIGRFAM: DNA polymerase III%2C delta prime subunit~PFAM: DNA polymerase III delta subunit gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1692 YPK_1693 YPK_1693 YPK_1693 1878901 1879710 + hydrolase%2C TatD family TIGRFAM: hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease~KEGG: yps:YPTB2464 putative deoxyribonuclease gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1693 YPK_1694 YPK_1694 YPK_1694 1880016 1881449 + PTS system%2C glucose-specific IIBC subunit TIGRFAM: PTS system%2C maltose and glucose-specific subfamily%2C IIC subunit%3B PTS system%2C glucose-specific IIBC subunit%3B PTS system%2C glucose-like IIB subunint~PFAM: phosphotransferase system PTS EIIB protein%3B phosphotransferase system EIIC~KEGG: yps:YPTB2463 PTS system%2C glucose-specific IIBC component gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1694 YPK_1695 YPK_1695 YPK_1695 1881829 1882647 + Shikimate dehydrogenase substrate binding domain protein PFAM: Shikimate/quinate 5-dehydrogenase%3B Shikimate dehydrogenase substrate binding domain protein~KEGG: ypm:YP_2244 putative shikimate dehydrogenase gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1695 YPK_1696 YPK_1696 YPK_1696 1882821 1883174 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: ypi:YpsIP31758_1588 histidine triad nucleotide-binding protein HinT gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1696 YPK_1697 YPK_1697 YPK_1697 1883209 1883598 + protein of unknown function DUF1425 PFAM: protein of unknown function DUF1425~KEGG: ypi:YpsIP31758_1589 putative lipoprotein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1697 YPK_1698 YPK_1698 YPK_1698 1883639 1884214 + membrane lipoprotein lipid attachment site TIGRFAM: membrane lipoprotein lipid attachment site~KEGG: yps:YPTB2451 putative lipoprotein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1698 YPK_1699 YPK_1699 YPK_1699 1884195 1885061 + thiamine kinase TIGRFAM: thiamine kinase~PFAM: Choline/ethanolamine kinase%3B aminoglycoside phosphotransferase~KEGG: ypm:YP_2240 predicted choline kinase involved in LPS biosynthesis gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1699 YPK_1700 YPK_1700 YPK_1700 1885132 1886163 + glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: ypi:YpsIP31758_1592 beta-hexosaminidase gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1700 YPK_1701 YPK_1701 YPK_1701 1886291 1886833 + protein of unknown function UPF0227 PFAM: protein of unknown function UPF0227~KEGG: ypi:YpsIP31758_1593 hypothetical protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1701 YPK_1702 YPK_1702 YPK_1702 1887208 1888512 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ypm:YP_2237 NADH dehydrogenase gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1702 YPK_1703 YPK_1703 YPK_1703 1889041 1889745 + conserved hypothetical protein KEGG: yps:YPTB2446 hypothetical protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1703 YPK_1704 YPK_1704 YPK_1704 1889753 1890166 + conserved hypothetical protein KEGG: ypm:YP_2235 hypothetical protein gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1704 YPK_1705 YPK_1705 YPK_1705 1890477 1891016 + 17 kDa surface antigen PFAM: 17 kDa surface antigen~KEGG: ypm:YP_1753 hypothetical protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1705 YPK_1706 YPK_1706 YPK_1706 1891256 1894702 - transcription-repair coupling factor KEGG: ypi:YpsIP31758_1598 transcription-repair coupling factor~TIGRFAM: transcription-repair coupling factor~PFAM: helicase domain protein%3B transcription factor CarD%3B TRCF domain protein%3B type III restriction protein res subunit%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1706 YPK_1707 YPK_1707 YPK_1707 1894972 1896174 + lipoprotein releasing system%2C transmembrane protein%2C LolC/E family TIGRFAM: lipoprotein releasing system%2C transmembrane protein%2C LolC/E family~PFAM: protein of unknown function DUF214~KEGG: ypi:YpsIP31758_1600 lipoprotein-releasing system%2C transmembrane protein LolC gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1707 YPK_1708 YPK_1708 YPK_1708 1896167 1896871 + lipoprotein releasing system%2C ATP-binding protein KEGG: yps:YPTB2441 ABC transporter/lipoprotein releasing system%2C ATP-binding subunit lolD~TIGRFAM: lipoprotein releasing system%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1708 YPK_1709 YPK_1709 YPK_1709 1896871 1898118 + lipoprotein releasing system%2C transmembrane protein LolE TIGRFAM: lipoprotein releasing system%2C transmembrane protein%2C LolC/E family%3B lipoprotein releasing system%2C transmembrane protein LolE~PFAM: protein of unknown function DUF214~KEGG: ypm:YP_1757 lipoprotein releasing system%2C transmembrane protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1709 YPK_1710 YPK_1710 YPK_1710 1898137 1899051 + ROK family protein PFAM: ROK family protein~KEGG: yps:YPTB2439 hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1710 YPK_1711 YPK_1711 YPK_1711 1899100 1899936 + Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: ypi:YpsIP31758_1604 NAD-dependent deacetylase-like protein gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1711 YPK_1712 YPK_1712 YPK_1712 1900266 1901501 + peptidase T KEGG: ypm:YP_1761 putative peptidase T~TIGRFAM: peptidase T~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1712 YPK_1713 YPK_1713 YPK_1713 1901751 1902872 - Cupin 4 family protein PFAM: Cupin 4 family protein~SMART: transcription factor jumonji jmjC domain protein~KEGG: yps:YPTB2436 hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1713 YPK_1714 YPK_1714 YPK_1714 1902956 1904362 - integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B PhoQ Sensor domain protein~KEGG: ypm:YP_1763 sensor protein kinase gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1714 YPK_1715 YPK_1715 YPK_1715 1904416 1905087 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_1764 response regulator protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1715 YPK_1716 YPK_1716 YPK_1716 1905298 1905876 - putative lipoprotein KEGG: yps:YPTB2433 putative lipoprotein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1716 YPK_1717 YPK_1717 YPK_1717 1905916 1906083 - conserved hypothetical protein KEGG: ypk:y1796 hypothetical protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1717 YPK_1718 YPK_1718 YPK_1718 1906113 1907483 - adenylosuccinate lyase KEGG: ypi:YpsIP31758_1610 adenylosuccinate lyase~TIGRFAM: adenylosuccinate lyase~PFAM: fumarate lyase%3B Adenylosuccinate lyase domain protein gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1718 YPK_1719 YPK_1719 YPK_1719 1907544 1908170 - protein of unknown function DUF489 PFAM: protein of unknown function DUF489~KEGG: ypk:y1798 hypothetical protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1719 YPK_1720 YPK_1720 YPK_1720 1908228 1909343 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~KEGG: ypm:YP_1768 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1720 YPK_1721 YPK_1721 YPK_1721 1909530 1909976 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypp:YPDSF_1809 hypothetical protein gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1721 YPK_1722 YPK_1722 YPK_1722 1909969 1910595 - pseudouridine synthase PFAM: pseudouridine synthase~KEGG: yps:YPTB2428 putative pseudouridine synthase gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1722 YPK_1723 YPK_1723 YPK_1723 1910726 1911979 + isocitrate dehydrogenase%2C NADP-dependent TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~PFAM: isocitrate/isopropylmalate dehydrogenase~KEGG: ypm:YP_1771 isocitrate dehydrogenase [NADP] gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1723 YPK_1724 YPK_1724 YPK_1724 1912121 1913167 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: yps:YPTB2426 sucrose operon repressor LacI-family gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1724 YPK_1725 YPK_1725 YPK_1725 1913427 1913687 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1617 hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1725 YPK_1726 YPK_1726 YPK_1726 1913807 1915387 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor KEGG: ypp:YPDSF_1804 methyl-accepting chemotaxis protein~TIGRFAM: PAS sensor protein~PFAM: histidine kinase HAMP region domain protein%3B chemotaxis sensory transducer%3B PAS fold-3 domain protein~SMART: PAC repeat-containing protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1726 YPK_1727 YPK_1727 YPK_1727 1916307 1917164 - NmrA family protein PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase%3B NmrA family protein~KEGG: yps:YPTB2423 hypothetical protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1727 YPK_1728 YPK_1728 YPK_1728 1917300 1917707 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: ypm:YP_1776 predicted transcriptional regulators gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1728 YPK_1729 YPK_1729 YPK_1729 1917935 1918027 - conserved hypothetical protein KEGG: ypk:y1809 hypothetical protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1729 YPK_1730 YPK_1730 YPK_1730 1918239 1919564 + histidine acid phosphatase PFAM: histidine acid phosphatase~KEGG: ypi:YpsIP31758_1622 periplasmic AppA protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1730 YPK_1731 YPK_1731 YPK_1731 1919866 1920069 - conserved hypothetical protein KEGG: ypm:YP_1779 hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1731 YPK_1732 YPK_1732 YPK_1732 1920372 1921271 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1624 hypothetical protein gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1732 YPK_1733 YPK_1733 YPK_1733 1921363 1921812 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: ypi:YpsIP31758_1625 transcriptional regulator%2C AsnC family gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1733 YPK_1734 YPK_1734 YPK_1734 1922134 1922283 + hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1734 YPK_1735 YPK_1735 YPK_1735 1922323 1922856 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1627 hypothetical protein gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1735 YPK_1736 YPK_1736 YPK_1736 1923025 1923186 + hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1736 YPK_1737 YPK_1737 YPK_1737 1923139 1924149 - NAD(P)H quinone oxidoreductase%2C PIG3 family TIGRFAM: NAD(P)H quinone oxidoreductase%2C PIG3 family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ypm:YP_1784 probable zinc-binding dehydrogenase gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1737 YPK_1738 YPK_1738 YPK_1738 1924253 1924396 - hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1738 YPK_1739 YPK_1739 YPK_1739 1924556 1927756 - glycoside hydrolase family 2 TIM barrel PFAM: glycoside hydrolase family 42 domain 5 loop region%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich%3B glycoside hydrolase family 2 TIM barrel%3B glycoside hydrolase family 2 sugar binding~KEGG: yps:YPTB2415 beta-galactosidase gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1739 YPK_1740 YPK_1740 YPK_1740 1928297 1928509 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypm:YP_1786 cold shock protein gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1740 YPK_1741 YPK_1741 YPK_1741 1928724 1928915 + DsrB protein KEGG: ypi:YpsIP31758_1630 DsrB protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1741 YPK_1742 YPK_1742 YPK_1742 1929098 1930837 - methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase HAMP region domain protein%3B chemotaxis sensory transducer~KEGG: yps:YPTB2412 methyl-accepting chemotaxis protein III (MCP-III) gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1742 YPK_1743 YPK_1743 YPK_1743 1931963 1932661 + MgtC/SapB transporter PFAM: MgtC/SapB transporter~KEGG: ypi:YpsIP31758_1632 putative transporter%2C Mg2+ transporter-C (MgtC) family gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1743 YPK_1744 YPK_1744 YPK_1744 1933046 1935745 + magnesium-translocating P-type ATPase KEGG: yps:YPTB2410 Mg(2+) transport protein B%2C P-type ATPase~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B magnesium-translocating P-type ATPase~PFAM: cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase%3B E1-E2 ATPase-associated domain protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1744 YPK_1745 YPK_1745 YPK_1745 1936933 1937283 + flagellar transcriptional activator PFAM: flagellar transcriptional activator~KEGG: ypi:YpsIP31758_1634 flagellar transcriptional activator FlhD gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1745 YPK_1746 YPK_1746 YPK_1746 1937287 1937868 + flagellar transcriptional activator FlhC PFAM: flagellar transcriptional activator FlhC~KEGG: ypi:YpsIP31758_1635 flagellar transcriptional activator FlhC gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1746 YPK_1747 YPK_1747 YPK_1747 1938073 1938960 + chemotaxis protein MotA KEGG: ypi:YpsIP31758_1636 chemotaxis protein MotA gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1747 YPK_1748 YPK_1748 YPK_1748 1938957 1940312 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: yps:YPTB2406 chemotaxis MotB protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1748 YPK_1749 YPK_1749 YPK_1749 1940323 1942506 + CheA signal transduction histidine kinase PFAM: CheW domain protein%3B ATP-binding region ATPase domain protein%3B Signal transducing histidine kinase homodimeric%3B Hpt domain protein%3B CheY binding~KEGG: ypp:YPDSF_1781 chemotaxis protein CheA gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1749 YPK_1750 YPK_1750 YPK_1750 1942669 1943166 + CheW protein PFAM: CheW domain protein~KEGG: ypi:YpsIP31758_1639 chemotaxis protein CheW gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1750 YPK_1751 YPK_1751 YPK_1751 1943786 1946650 + putative integral membrane protein KEGG: ypi:YpsIP31758_1640 putative integral membrane protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1751 YPK_1752 YPK_1752 YPK_1752 1946719 1947420 + putative lipoprotein KEGG: ypi:YpsIP31758_1641 putative lipoprotein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1752 YPK_1753 YPK_1753 YPK_1753 1947661 1949334 + methyl-accepting chemotaxis sensory transducer PFAM: ligand binding Tar domain protein%3B histidine kinase HAMP region domain protein%3B chemotaxis sensory transducer~KEGG: ypi:YpsIP31758_1642 methyl-accepting chemotaxis protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1753 YPK_1754 YPK_1754 YPK_1754 1949519 1951142 + putative methyl-accepting chemotaxis sensory transducer pseudogene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1754 YPK_1756 YPK_1756 YPK_1756 1951300 1952187 + MCP methyltransferase%2C CheR-type PFAM: MCP methyltransferase CheR-type~KEGG: ypm:YP_1808 protein glutamate methyltransferase gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1756 YPK_1757 YPK_1757 YPK_1757 1952187 1953236 + response regulator receiver modulated CheB methylesterase PFAM: CheB methylesterase%3B response regulator receiver~KEGG: ypm:YP_1809 protein-glutamate methylesterase gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1757 YPK_1758 YPK_1758 YPK_1758 1953337 1953726 + response regulator receiver protein PFAM: response regulator receiver~KEGG: ypm:YP_1810 chemotaxis protein CheY gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1758 YPK_1759 YPK_1759 YPK_1759 1953736 1954380 + chemotaxis phosphatase%2C CheZ PFAM: Chemotaxis phosphatase CheZ~KEGG: ypi:YpsIP31758_1647 chemotaxis protein CheZ gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1759 YPK_1760 YPK_1760 YPK_1760 1954937 1955701 + N-acetylmuramyl-L-alanine amidase%2C negative regulator of AmpC%2C AmpD PFAM: N-acetylmuramoyl-L-alanine amidase family 2~KEGG: ypi:YpsIP31758_1649 N-acetylmuramoyl-L-alanine amidase%2C family 2 gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1760 YPK_1761 YPK_1761 YPK_1761 1956058 1958688 + YadA domain protein PFAM: YadA domain protein%3B Haemagluttinin domain protein%3B Hep_Hag repeat-containing protein~KEGG: yps:YPTB2394 putative surface protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1761 YPK_1762 YPK_1762 YPK_1762 1958788 1959741 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1651 hypothetical protein gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1762 YPK_1763 YPK_1763 YPK_1763 1960041 1960214 + hypothetical protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1763 YPK_1764 YPK_1764 YPK_1764 1960360 1961589 - alanine racemase KEGG: ypi:YpsIP31758_1652 alanine racemase~TIGRFAM: alanine racemase~PFAM: alanine racemase domain protein gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1764 YPK_1765 YPK_1765 YPK_1765 1961991 1962185 - conserved hypothetical protein KEGG: ypm:YP_1817 hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1765 YPK_1766 YPK_1766 YPK_1766 1962211 1962330 + hypothetical protein gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1766 YPK_1767 YPK_1767 YPK_1767 1962734 1962982 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1654 hypothetical protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1767 YPK_1768 YPK_1768 YPK_1768 1963375 1964631 + Patatin PFAM: Patatin~KEGG: ypi:YpsIP31758_1656 phospholipase%2C patatin family gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1768 YPK_1769 YPK_1769 YPK_1769 1964786 1965019 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1657 hypothetical protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1769 YPK_1770 YPK_1770 YPK_1770 1965302 1965475 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1658 hypothetical protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1770 YPK_1771 YPK_1771 YPK_1771 1965827 1966216 + protein of unknown function DUF437 PFAM: protein of unknown function DUF437~KEGG: ypm:YP_1718 hypothetical protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1771 YPK_1772 YPK_1772 YPK_1772 1966326 1966565 - protein of unknown function DUF1480 PFAM: protein of unknown function DUF1480~KEGG: ypi:YpsIP31758_1660 hypothetical protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1772 YPK_1773 YPK_1773 YPK_1773 1966773 1967762 - Spore coat U domain protein PFAM: Spore coat U domain protein~KEGG: ypi:YpsIP31758_1661 spore coat U domain protein gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1773 YPK_1774 YPK_1774 YPK_1774 1967968 1970415 - fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: yps:YPTB2385 probable outer membrane usher protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1774 YPK_1775 YPK_1775 YPK_1775 1970518 1971270 - chaperone protein KEGG: ypp:YPDSF_1751 chaperone protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1775 YPK_1776 YPK_1776 YPK_1776 1971301 1971858 - Spore coat U domain protein PFAM: Spore coat U domain protein~KEGG: ypm:YP_1723 hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1776 YPK_1777 YPK_1777 YPK_1777 1971879 1972409 - Spore coat U domain protein PFAM: Spore coat U domain protein~KEGG: ypm:YP_1724 hypothetical protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1777 YPK_1778 YPK_1778 YPK_1778 1972415 1972969 - Spore coat U domain protein PFAM: Spore coat U domain protein~KEGG: ypi:YpsIP31758_1667 hypothetical protein gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1778 YPK_1779 YPK_1779 YPK_1779 1973450 1976080 - Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: ypm:YP_1726 paraquat-inducible protein B gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1779 YPK_1780 YPK_1780 YPK_1780 1976049 1977401 - integral membrane protein%2C PqiA family TIGRFAM: integral membrane protein%2C PqiA family~PFAM: Paraquat-inducible protein A~KEGG: yps:YPTB2379 hypothetical protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1780 YPK_1781 YPK_1781 YPK_1781 1977528 1978025 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1670 hypothetical protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1781 YPK_1782 YPK_1782 YPK_1782 1978121 1978834 + ProQ activator of osmoprotectant transporter ProP PFAM: ProQ activator of osmoprotectant transporter ProP~KEGG: ypi:YpsIP31758_1671 ProP effector gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1782 YPK_1783 YPK_1783 YPK_1783 1978854 1980932 + carboxyl-terminal protease KEGG: yps:YPTB2376 tail-specific protease precursor~TIGRFAM: carboxyl-terminal protease~PFAM: PDZ/DHR/GLGF domain protein%3B peptidase S41 gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1783 YPK_1784 YPK_1784 YPK_1784 1981388 1982269 + HtpX domain protein PFAM: peptidase M48 Ste24p%3B HtpX domain protein~KEGG: ypm:YP_1731 putative heat shock protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1784 YPK_1785 YPK_1785 YPK_1785 1982205 1982393 - hypothetical protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1785 YPK_1786 YPK_1786 YPK_1786 1982928 1983470 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypi:YpsIP31758_1675 fimbrial protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1786 YPK_1787 YPK_1787 YPK_1787 1983606 1984385 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: yps:YPTB2373 putative chaperone protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1787 YPK_1788 YPK_1788 YPK_1788 1984467 1987079 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: ypp:YPDSF_1739 outer membrane usher protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1788 YPK_1789 YPK_1789 YPK_1789 1987076 1988239 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypm:YP_1735 putative fimbrial componenet gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1789 YPK_1790 YPK_1790 YPK_1790 1988236 1989039 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: ypp:YPDSF_1737 chaperone protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1790 YPK_1791 YPK_1791 YPK_1791 1989093 1990460 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_1737 putative transport protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1791 YPK_1792 YPK_1792 YPK_1792 1990827 1991993 + Oligogalacturonide lyase PFAM: WD40 domain protein beta Propeller~KEGG: ypi:YpsIP31758_1682 oligogalacturonide lyase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1792 YPK_1793 YPK_1793 YPK_1793 1992180 1992971 + transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~KEGG: ypm:YP_1739 IclR-family transcriptional regulatory protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1793 YPK_1794 YPK_1794 YPK_1794 1993338 1994189 + N-acetylmuramyl-L-alanine amidase%2C negative regulator of AmpC%2C AmpD PFAM: Peptidoglycan-binding domain 1 protein%3B N-acetylmuramoyl-L-alanine amidase family 2~KEGG: ypm:YP_1740 probable N-acetylmuramoyl-L-alanine amidase gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1794 YPK_1795 YPK_1795 YPK_1795 1994403 1995794 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: ypi:YpsIP31758_1685 sodium:dicarboxylate symporter family protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1795 YPK_1796 YPK_1796 YPK_1796 1995998 1996546 - membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase~KEGG: ypm:YP_1742 putative membrane protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1796 YPK_1797 YPK_1797 YPK_1797 1997044 1997754 - Oligogalacturonate-specific porin PFAM: Oligogalacturonate-specific porin~KEGG: ypi:YpsIP31758_1687 oligogalacturonate-specific porin protein KdgM gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1797 YPK_1798 YPK_1798 YPK_1798 1998052 1999344 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_1688 oligogalacturonide ABC transporter%2C periplasmic oligogalacturonide-binding protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1798 YPK_1799 YPK_1799 YPK_1799 1999360 2000487 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypm:YP_1745 putative sugar ABC transporter gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1799 YPK_1800 YPK_1800 YPK_1800 2000501 2001421 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_1746 putative sugar ABC transporter (permease) gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1800 YPK_1801 YPK_1801 YPK_1801 2001414 2002304 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_1691 oligogalacturonide ABC tansporter%2C permease protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1801 YPK_1802 YPK_1802 YPK_1802 2002345 2004012 - Pectate disaccharide-lyase PFAM: periplasmic pectate lyase~KEGG: ypi:YpsIP31758_1692 periplasmic pectate lyase gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1802 YPK_1803 YPK_1803 YPK_1803 2004357 2005118 - 2-deoxy-D-gluconate 3-dehydrogenase TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ypi:YpsIP31758_1693 2-deoxy-D-gluconate 3-dehydrogenase gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1803 YPK_1804 YPK_1804 YPK_1804 2005210 2006046 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase PFAM: 5-keto 4-deoxyuronate isomerase~KEGG: ypi:YpsIP31758_1694 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1804 YPK_1805 YPK_1805 YPK_1805 2006382 2006714 + Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: ypi:YpsIP31758_1696 cupin domain protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1805 YPK_1806 YPK_1806 YPK_1806 2006761 2007969 - transposase mutator type PFAM: transposase mutator type~KEGG: yps:YPTB3311 putative transposase gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1806 YPK_1807 YPK_1807 YPK_1807 2008017 2008208 - transposase KEGG: ypn:YPN_1903 transposase gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1807 YPK_1808 YPK_1808 YPK_1808 2008509 2009174 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypi:YpsIP31758_1697 HAD hydrolase%2C IA family gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1808 YPK_1809 YPK_1809 YPK_1809 2009585 2010139 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1699 hypothetical protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1809 YPK_1810 YPK_1810 YPK_1810 2010175 2010363 + hypothetical protein gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1810 YPK_1811 YPK_1811 YPK_1811 2010268 2011143 - fructosamine kinase PFAM: aminoglycoside phosphotransferase%3B fructosamine kinase~KEGG: ypi:YpsIP31758_1700 fructosamine kinase family protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1811 YPK_1812 YPK_1812 YPK_1812 2011447 2012340 - ABC-3 protein PFAM: transport system permease protein%3B ABC-3 protein~KEGG: ypm:YP_2230 chelated iron transport system membrane protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1812 YPK_1813 YPK_1813 YPK_1813 2012337 2013221 - ABC-3 protein PFAM: transport system permease protein%3B ABC-3 protein~KEGG: ypi:YpsIP31758_1703 chelated iron ABC transporter%2C permease protein YfeC gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1813 YPK_1814 YPK_1814 YPK_1814 2013221 2014111 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2228 ATP-binding transport protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1814 YPK_1815 YPK_1815 YPK_1815 2014108 2015076 - periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: yps:YPTB2347 ABC transporter%2C periplasmic iron siderophore-binding protein YfeA gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1815 YPK_1816 YPK_1816 YPK_1816 2015288 2015950 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: ypm:YP_2226 putative membrane-bound lytic mureintransglycosylase gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1816 YPK_1817 YPK_1817 YPK_1817 2016072 2016755 - multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: ypm:YP_2225 multiple antibiotic resistance protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1817 YPK_1818 YPK_1818 YPK_1818 2017074 2017325 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1708 hypothetical protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1818 YPK_1819 YPK_1819 YPK_1819 2018084 2018296 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1711 hypothetical protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1819 YPK_1820 YPK_1820 YPK_1820 2018687 2020615 + threonyl-tRNA synthetase TIGRFAM: threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B TGS domain protein%3B Anticodon-binding domain protein%3B Threonyl/alanyl tRNA synthetase SAD~KEGG: ypi:YpsIP31758_1712 threonyl-tRNA synthetase gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1820 YPK_1821 YPK_1821 YPK_1821 2020820 2021170 + initiation factor 3 PFAM: initiation factor 3~KEGG: ypi:YpsIP31758_1713 translation initiation factor IF-3 gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1821 YPK_1822 YPK_1822 YPK_1822 2021267 2021464 + ribosomal protein L35 PFAM: ribosomal protein L35~KEGG: ypi:YpsIP31758_1714 ribosomal protein L35 gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1822 YPK_1823 YPK_1823 YPK_1823 2021502 2021858 + ribosomal protein L20 TIGRFAM: ribosomal protein L20~KEGG: ypi:YpsIP31758_1715 ribosomal protein L20 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1823 YPK_1824 YPK_1824 YPK_1824 2022357 2023340 + phenylalanyl-tRNA synthetase%2C alpha subunit TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein~KEGG: ypi:YpsIP31758_1716 phenylalanyl-tRNA synthetase%2C alpha subunit gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1824 YPK_1825 YPK_1825 YPK_1825 2023354 2025741 + phenylalanyl-tRNA synthetase%2C beta subunit KEGG: yps:YPTB2336 phenylalanyl-tRNA synthetase beta chain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1825 YPK_1826 YPK_1826 YPK_1826 2025746 2026042 + integration host factor%2C alpha subunit TIGRFAM: integration host factor%2C alpha subunit~PFAM: histone family protein DNA-binding protein~KEGG: yen:YE1918 integration host factor alpha-subunit gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1826 YPK_1827 YPK_1827 YPK_1827 2026376 2026834 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1719 hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1827 YPK_1828 YPK_1828 YPK_1828 2027061 2028068 + transport system permease protein PFAM: transport system permease protein~KEGG: ypi:YpsIP31758_1720 vitamin B12 import system permease protein BtuC gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1828 YPK_1829 YPK_1829 YPK_1829 2028138 2028692 + Glutathione peroxidase PFAM: glutathione peroxidase~KEGG: ypi:YpsIP31758_1721 vitamin B12 transport periplasmic protein BtuE gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1829 YPK_1830 YPK_1830 YPK_1830 2028717 2029475 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1722 vitamin B12 import ATP-binding protein BtuD gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1830 YPK_1831 YPK_1831 YPK_1831 2029825 2030979 + DegT/DnrJ/EryC1/StrS aminotransferase PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein%3B DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: ypm:YP_2209 putative lipopolysaccharide biosynthesis protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1831 YPK_1832 YPK_1832 YPK_1832 2030966 2031949 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: yps:YPTB2329 probable glycosyl transferase gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1832 YPK_1833 YPK_1833 YPK_1833 2031946 2033949 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B formyl transferase domain protein~KEGG: ypi:YpsIP31758_1727 bifunctional polymyxin resistance ArnA protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1833 YPK_1834 YPK_1834 YPK_1834 2033946 2034851 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: ypi:YpsIP31758_1728 polysaccharide deacetylase gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1834 YPK_1835 YPK_1835 YPK_1835 2034848 2036512 + glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: ypi:YpsIP31758_1729 undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1835 YPK_1836 YPK_1836 YPK_1836 2036509 2036853 + conserved hypothetical protein KEGG: ypm:YP_2204 hypothetical protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1836 YPK_1837 YPK_1837 YPK_1837 2036850 2037236 + conserved hypothetical protein KEGG: ypm:YP_2203 hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1837 YPK_1838 YPK_1838 YPK_1838 2037516 2037980 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: ypi:YpsIP31758_1732 lipoprotein%2C NlpC/P60 family gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1838 YPK_1839 YPK_1839 YPK_1839 2038105 2039121 + lipoyltransferase and lipoate-protein ligase TIGRFAM: lipoyltransferase and lipoate-protein ligase~PFAM: biotin/lipoate A/B protein ligase~KEGG: ypm:YP_2200 putative lipoate-protein ligase A gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1839 YPK_1840 YPK_1840 YPK_1840 2039173 2040636 + protein of unknown function UPF0061 PFAM: protein of unknown function UPF0061~KEGG: yps:YPTB2321 hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1840 YPK_1841 YPK_1841 YPK_1841 2040805 2041851 - phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: ypi:YpsIP31758_1735 phospho-2-dehydro-3-deoxyheptonate aldolase%2C Trp-sensitive~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1841 YPK_1842 YPK_1842 YPK_1842 2042008 2042829 - protein of unknown function DUF299 PFAM: protein of unknown function DUF299~KEGG: ypi:YpsIP31758_1736 hypothetical protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1842 YPK_1843 YPK_1843 YPK_1843 2043204 2045588 + phosphoenolpyruvate synthase TIGRFAM: phosphoenolpyruvate synthase~PFAM: PEP-utilizing protein%3B pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region~KEGG: ypk:y1930 phosphoenolpyruvate synthase gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1843 YPK_1844 YPK_1844 YPK_1844 2046188 2047291 - protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: ypm:YP_2195 hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1844 YPK_1845 YPK_1845 YPK_1845 2047912 2050968 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: yps:YPTB2316 hypothetical protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1845 YPK_1846 YPK_1846 YPK_1846 2051106 2051522 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ypi:YpsIP31758_1740 esterase YdiI gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1846 YPK_1847 YPK_1847 YPK_1847 2052117 2052488 + FeS assembly scaffold SufA TIGRFAM: iron-sulfur cluster assembly accessory protein%3B FeS assembly scaffold SufA~PFAM: HesB/YadR/YfhF-family protein~KEGG: ypi:YpsIP31758_1741 FeS assembly scaffold SufA gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1847 YPK_1848 YPK_1848 YPK_1848 2052503 2054014 + FeS assembly protein SufB TIGRFAM: FeS assembly protein SufB~PFAM: SufBD protein~KEGG: yps:YPTB2313 hypothetical protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1848 YPK_1849 YPK_1849 YPK_1849 2054199 2054945 + FeS assembly ATPase SufC KEGG: yps:YPTB2312 putative ATP-dependent transporter~TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1849 YPK_1850 YPK_1850 YPK_1850 2054920 2056245 + FeS assembly protein SufD TIGRFAM: FeS assembly protein SufD~PFAM: SufBD protein~KEGG: ypp:YPDSF_0747 hypothetical protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1850 YPK_1851 YPK_1851 YPK_1851 2056242 2057462 + cysteine desulfurase%2C SufS subfamily TIGRFAM: cysteine desulfurase%2C SufS subfamily~PFAM: aminotransferase class V~KEGG: ypm:YP_2187 putative selenocysteine lyase gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1851 YPK_1852 YPK_1852 YPK_1852 2057551 2057973 + Fe-S metabolism associated SufE PFAM: Fe-S metabolism associated SufE~KEGG: yps:YPTB2309 hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1852 YPK_1853 YPK_1853 YPK_1853 2058244 2059308 + ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: ypi:YpsIP31758_1747 ErfK/YbiS/YcfS/YnhG family protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1853 YPK_1854 YPK_1854 YPK_1854 2059668 2059904 - LPP repeat-containing protein PFAM: LPP repeat-containing protein~KEGG: ypi:YpsIP31758_1748 major outer membrane lipoprotein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1854 YPK_1855 YPK_1855 YPK_1855 2060225 2061637 - pyruvate kinase KEGG: ypi:YpsIP31758_1749 pyruvate kinase I~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1855 YPK_1856 YPK_1856 YPK_1856 2062894 2064267 - MATE efflux family protein TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~KEGG: ypm:YP_2179 putative transport protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1856 YPK_1857 YPK_1857 YPK_1857 2064516 2065172 + riboflavin synthase%2C alpha subunit TIGRFAM: riboflavin synthase%2C alpha subunit~PFAM: Lumazine-binding protein~KEGG: yps:YPTB2304 riboflavin synthase alpha chain gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1857 YPK_1858 YPK_1858 YPK_1858 2065223 2066374 - Cyclopropane-fatty-acyl-phospholipid synthase PFAM: Cyclopropane-fatty-acyl-phospholipid synthase%3B Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypi:YpsIP31758_1752 cyclopropane-fatty-acyl-phospholipid synthase gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1858 YPK_1859 YPK_1859 YPK_1859 2066854 2068056 - drug resistance transporter%2C Bcr/CflA subfamily TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_2175 putative drug resistance protein gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1859 YPK_1860 YPK_1860 YPK_1860 2068346 2069278 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_2174 LysR-family transcriptional regulatory protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1860 YPK_1861 YPK_1861 YPK_1861 2069220 2069381 - hypothetical protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1861 YPK_1862 YPK_1862 YPK_1862 2069381 2070406 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_1755 purine nucleotide synthesis repressor gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1862 YPK_1863 YPK_1863 YPK_1863 2070933 2071511 - Superoxide dismutase PFAM: manganese and iron superoxide dismutase~KEGG: ypi:YpsIP31758_1756 superoxide dismutase (Fe) gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1863 YPK_1864 YPK_1864 YPK_1864 2071887 2072738 - NLP/P60 protein PFAM: NLP/P60 protein~KEGG: ypi:YpsIP31758_1757 lipoprotein%2C NlpC/P60 family gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1864 YPK_1865 YPK_1865 YPK_1865 2072857 2073078 + conserved hypothetical protein KEGG: ype:YPO2384 hypothetical protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1865 YPK_1866 YPK_1866 YPK_1866 2073178 2073528 + glutaredoxin-like protein TIGRFAM: glutaredoxin-like protein~PFAM: glutaredoxin~KEGG: ypi:YpsIP31758_1758 monothiol glutaredoxin GrxD gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1866 YPK_1867 YPK_1867 YPK_1867 2073731 2073892 + hypothetical protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1867 YPK_1868 YPK_1868 YPK_1868 2073837 2074517 - ribonuclease T KEGG: ypp:YPDSF_0764 ribonuclease T~TIGRFAM: ribonuclease T~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1868 YPK_1869 YPK_1869 YPK_1869 2074596 2075003 - lactoylglutathione lyase KEGG: ypi:YpsIP31758_1760 lactoylglutathione lyase~TIGRFAM: lactoylglutathione lyase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1869 YPK_1870 YPK_1870 YPK_1870 2075276 2076280 + Rhs family protein-like protein KEGG: yps:YPTB2294 insecticial toxin gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1870 YPK_1871 YPK_1871 YPK_1871 2076501 2077598 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: ypi:YpsIP31758_1762 oxidoreductase%2C FAD/FMN-binding gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1871 YPK_1872 YPK_1872 YPK_1872 2077686 2078285 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypi:YpsIP31758_1763 transcriptional regulator%2C TetR family gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1872 YPK_1873 YPK_1873 YPK_1873 2078508 2080145 - protein of unknown function DUF1705 PFAM: sulfatase%3B protein of unknown function DUF1705~KEGG: yps:YPTB2291 putative membrane protein gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1873 YPK_1874 YPK_1874 YPK_1874 2080193 2080558 + protein of unknown function DUF1289 PFAM: protein of unknown function DUF1289~KEGG: ypi:YpsIP31758_1765 hypothetical protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1874 YPK_1875 YPK_1875 YPK_1875 2080690 2081586 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: yps:YPTB2289 putative aldo/keto reductase gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1875 YPK_1876 YPK_1876 YPK_1876 2082384 2082815 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~KEGG: ypm:YP_2160 MarR-family transcriptional regulatory protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1876 YPK_1877 YPK_1877 YPK_1877 2082959 2083426 - 17 kDa surface antigen PFAM: 17 kDa surface antigen~KEGG: yps:YPTB2287 putative lipoprotein gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1877 YPK_1878 YPK_1878 YPK_1878 2083982 2085094 + protein of unknown function UPF0075 PFAM: protein of unknown function UPF0075~KEGG: ypm:YP_2158 hypothetical protein gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1878 YPK_1879 YPK_1879 YPK_1879 2085152 2085466 + conserved hypothetical protein KEGG: ypk:y1964 hypothetical protein gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1879 YPK_1880 YPK_1880 YPK_1880 2085488 2086210 + pyridoxamine 5'-phosphate oxidase KEGG: ypp:YPDSF_0776 pyridoxamine 5'-phosphate oxidase~TIGRFAM: pyridoxamine 5'-phosphate oxidase~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1880 YPK_1881 YPK_1881 YPK_1881 2086392 2087666 + tyrosyl-tRNA synthetase KEGG: ypi:YpsIP31758_1773 tyrosyl-tRNA synthetase~TIGRFAM: tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib%3B RNA-binding S4 domain protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1881 YPK_1882 YPK_1882 YPK_1882 2087821 2088681 + pyridoxal kinase TIGRFAM: pyridoxal kinase~PFAM: Phosphomethylpyrimidine kinase type-1~KEGG: yps:YPTB2282 pyridoxine kinase gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1882 YPK_1883 YPK_1883 YPK_1883 2088741 2089346 - Glutathione S-transferase domain PFAM: Glutathione S-transferase domain~KEGG: ypi:YpsIP31758_1775 glutathione S-transferase gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1883 YPK_1884 YPK_1884 YPK_1884 2089591 2089854 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1776 hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1884 YPK_1885 YPK_1885 YPK_1885 2090100 2090690 - protein of unknown function DUF1282 PFAM: protein of unknown function DUF1282~KEGG: ypm:YP_2151 hypothetical protein gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1885 YPK_1886 YPK_1886 YPK_1886 2090946 2092481 - amino acid/peptide transporter KEGG: ypm:YP_2150 putative proton dependent peptide transporter~TIGRFAM: amino acid/peptide transporter~PFAM: TGF-beta receptor type I/II extracellular region%3B major facilitator superfamily MFS_1 gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1886 YPK_1887 YPK_1887 YPK_1887 2093095 2094375 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1779 hypothetical protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1887 YPK_1888 YPK_1888 YPK_1888 2094766 2095581 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_2148 peptide transport system ATP-binding protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1888 YPK_1889 YPK_1889 YPK_1889 2095581 2096573 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: ypm:YP_2147 peptide transport system ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1889 YPK_1890 YPK_1890 YPK_1890 2096573 2097463 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2146 peptide transport system permease protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1890 YPK_1891 YPK_1891 YPK_1891 2097450 2098415 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2145 peptide transport system permease protein gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1891 YPK_1892 YPK_1892 YPK_1892 2098412 2100055 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ypi:YpsIP31758_1784 peptide ABC transporter%2C periplasmic peptide-binding protein gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1892 YPK_1893 YPK_1893 YPK_1893 2100613 2101641 - sigma54 specific transcriptional regulator%2C Fis family KEGG: ypm:YP_2140 psp operon transcriptional activator~TIGRFAM: psp operon transcriptional activator~PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1893 YPK_1894 YPK_1894 YPK_1894 2101886 2102551 + phage shock protein A%2C PspA TIGRFAM: phage shock protein A~PFAM: PspA/IM30 family protein~KEGG: yps:YPTB2270 phage shock protein A gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1894 YPK_1895 YPK_1895 YPK_1895 2102713 2102940 + phage shock protein B TIGRFAM: phage shock protein B~PFAM: shock B family protein~KEGG: ypm:YP_2138 phage shock protein B gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1895 YPK_1896 YPK_1896 YPK_1896 2102940 2103299 + phage shock protein C%2C PspC TIGRFAM: phage shock protein C~PFAM: PspC domain protein~KEGG: ypm:YP_2137 phage shock protein C gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1896 YPK_1897 YPK_1897 YPK_1897 2103384 2103626 + phage shock protein PspD TIGRFAM: phage shock protein PspD~PFAM: shock protein PspD~KEGG: ypi:YpsIP31758_1789 phage shock protein D gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1897 YPK_1898 YPK_1898 YPK_1898 2103607 2105004 + protein of unknown function DUF463 YcjX family protein PFAM: protein of unknown function DUF463 YcjX family protein~KEGG: ypi:YpsIP31758_1790 hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1898 YPK_1899 YPK_1899 YPK_1899 2105001 2106062 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypm:YP_2134 hypothetical protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1899 YPK_1900 YPK_1900 YPK_1900 2106072 2106530 - RES domain protein PFAM: RES domain protein~KEGG: yps:YPTB2264 hypothetical protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1900 YPK_1901 YPK_1901 YPK_1901 2106592 2107038 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypm:YP_2132 hypothetical protein gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1901 YPK_1902 YPK_1902 YPK_1902 2107375 2108952 + transcriptional regulator%2C TyrR PFAM: sigma-54 factor interaction domain-containing protein%3B amino acid-binding ACT domain protein~SMART: PAS domain containing protein%3B AAA ATPase~KEGG: ypi:YpsIP31758_1794 transcriptional regulatory protein TyrR gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1902 YPK_1903 YPK_1903 YPK_1903 2109133 2109636 - Redoxin domain protein PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: ypi:YpsIP31758_1795 thiol peroxidase gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1903 YPK_1904 YPK_1904 YPK_1904 2109799 2110773 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ypi:YpsIP31758_1796 mandelate racemase/muconate lactonizing enzyme family protein gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1904 YPK_1905 YPK_1905 YPK_1905 2110815 2111585 - peptidase M14 carboxypeptidase A PFAM: peptidase M14 carboxypeptidase A~KEGG: yps:YPTB2259 hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1905 YPK_1906 YPK_1906 YPK_1906 2111963 2113579 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: yps:YPTB2258 putative ABC transporter%2C periplasmic murein peptide-binding protein gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1906 YPK_1907 YPK_1907 YPK_1907 2113792 2114805 + Mg2 transporter protein CorA family protein PFAM: Mg2 transporter protein CorA family protein~KEGG: ypp:YPDSF_0807 CorA-like Mg2+ transporter protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1907 YPK_1908 YPK_1908 YPK_1908 2115179 2116018 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~KEGG: ypi:YpsIP31758_1800 transcriptional regulator%2C MerR family gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1908 YPK_1909 YPK_1909 YPK_1909 2116222 2116431 + hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1909 YPK_1910 YPK_1910 YPK_1910 2116330 2117334 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1801 hypothetical protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1910 YPK_1911 YPK_1911 YPK_1911 2117429 2117554 + hypothetical protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1911 YPK_1912 YPK_1912 YPK_1912 2117605 2118546 - PP-loop domain protein PFAM: PP-loop domain protein~KEGG: ypm:YP_2121 predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1912 YPK_1913 YPK_1913 YPK_1913 2118831 2122364 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B pyruvate ferredoxin/flavodoxin oxidoreductase%3B pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~KEGG: ypi:YpsIP31758_1803 pyruvate:ferredoxin (flavodoxin) oxidoreductase gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1913 YPK_1914 YPK_1914 YPK_1914 2122843 2123175 + small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: ypm:YP_2119 quaternary ammonium compound-resistance protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1914 YPK_1915 YPK_1915 YPK_1915 2123235 2123894 - MgtC/SapB transporter PFAM: MgtC/SapB transporter~KEGG: ypm:YP_2118 putative membrane protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1915 YPK_1916 YPK_1916 YPK_1916 2124197 2124520 + putative lipoprotein KEGG: yps:YPTB2250 putative lipoprotein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1916 YPK_1917 YPK_1917 YPK_1917 2124578 2125030 - protein of unknown function DUF306 Meta and HslJ PFAM: protein of unknown function DUF306 Meta and HslJ~KEGG: yps:YPTB2249 putative heat shock protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1917 YPK_1918 YPK_1918 YPK_1918 2125100 2126092 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: ypi:YpsIP31758_1808 fermentative lactate dehydrogenase gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1918 YPK_1919 YPK_1919 YPK_1919 2126358 2129072 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1809 hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1919 YPK_1920 YPK_1920 YPK_1920 2129069 2129263 + putative lipoprotein KEGG: ypi:YpsIP31758_1810 putative lipoprotein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1920 YPK_1921 YPK_1921 YPK_1921 2129273 2129644 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_1811 hypothetical protein gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1921 YPK_1922 YPK_1922 YPK_1922 2129830 2131221 - Mannitol dehydrogenase domain PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~KEGG: ypp:YPDSF_0821 mannitol dehydrogenase gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1922 YPK_1923 YPK_1923 YPK_1923 2131431 2132387 + transcriptional regulator%2C DeoR family PFAM: putative sugar-binding domain protein~KEGG: ypi:YpsIP31758_1813 putative sugar-binding domain protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1923 YPK_1924 YPK_1924 YPK_1924 2132508 2133113 - NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)%3B NADPH-dependent FMN reductase~KEGG: ypi:YpsIP31758_1814 FMN-dependent NADH-azoreductase gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1924 YPK_1925 YPK_1925 YPK_1925 2133536 2137423 + ATP-dependent helicase HrpA KEGG: ypi:YpsIP31758_1815 ATP-dependent helicase HrpA~TIGRFAM: ATP-dependent helicase HrpA~PFAM: helicase domain protein%3B helicase-associated domain protein%3B protein of unknown function DUF1605~SMART: AAA ATPase%3B DEAD-like helicases gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1925 YPK_1926 YPK_1926 YPK_1926 2137762 2138091 + protein of unknown function DUF891 PFAM: protein of unknown function DUF891~KEGG: ypi:YpsIP31758_1816 hypothetical protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1926 YPK_1927 YPK_1927 YPK_1927 2138088 2138411 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~KEGG: ypi:YpsIP31758_1817 DNA-binding protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1927 YPK_1928 YPK_1928 YPK_1928 2138467 2139303 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~KEGG: ypp:YPDSF_0826 pepetidase gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1928 YPK_1929 YPK_1929 YPK_1929 2139637 2139927 - acid shock protein KEGG: yps:YPTB2237 acid shock protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1929 YPK_1930 YPK_1930 YPK_1930 2140546 2141100 + cytochrome B561 PFAM: cytochrome B561~KEGG: ypi:YpsIP31758_1820 cytochrome b561 family protein gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1930 YPK_1931 YPK_1931 YPK_1931 2141126 2141704 + YceI family protein PFAM: YceI family protein~KEGG: ypi:YpsIP31758_1821 hypothetical protein gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1931 YPK_1932 YPK_1932 YPK_1932 2141692 2141814 - hypothetical protein gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1932 YPK_1933 YPK_1933 YPK_1933 2142531 2145499 - putative insecticidal toxin complex pseudogene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1933 YPK_1935 YPK_1935 YPK_1935 2146338 2147837 - Carboxypeptidase Taq PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase~KEGG: yps:YPTB2232 putative carboxypeptidase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1935 YPK_1936 YPK_1936 YPK_1936 2147915 2149219 - integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypk:y2140 sensor histidine protein kinase (RstA regulator) gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1936 YPK_1937 YPK_1937 YPK_1937 2149219 2149965 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_2093 two-component regulatory system%2C response regulator protein gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1937 YPK_1938 YPK_1938 YPK_1938 2150262 2150678 + conserved hypothetical protein KEGG: yps:YPTB2229 hypothetical protein gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1938 YPK_1939 YPK_1939 YPK_1939 2150702 2152093 - arginine/ornithine antiporter TIGRFAM: arginine/ornithine antiporter~PFAM: amino acid permease-associated region~KEGG: ypm:YP_2091 putative amino acid antiporter gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1939 YPK_1940 YPK_1940 YPK_1940 2152363 2153316 - protein of unknown function DUF1471 PFAM: protein of unknown function DUF1471~KEGG: ypi:YpsIP31758_1829 hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1940 YPK_1941 YPK_1941 YPK_1941 2153846 2155372 + NAD(P) transhydrogenase%2C alpha subunit KEGG: ypi:YpsIP31758_1830 NAD(P) transhydrogenase%2C alpha subunit~TIGRFAM: NAD(P) transhydrogenase%2C alpha subunit~PFAM: alanine dehydrogenase/PNT domain protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1941 YPK_1942 YPK_1942 YPK_1942 2155462 2156856 + NAD(P)(+) transhydrogenase (AB-specific) PFAM: NAD(P) transhydrogenase beta subunit~KEGG: ypi:YpsIP31758_1831 NAD(P) transhydrogenase%2C beta subunit gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1942 YPK_1943 YPK_1943 YPK_1943 2156947 2157903 - UspA domain protein PFAM: UspA domain protein~KEGG: ypk:y2133 hypothetical protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1943 YPK_1944 YPK_1944 YPK_1944 2158038 2158790 - transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~KEGG: ypi:YpsIP31758_1833 fumarate and nitrate reduction regulatory protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1944 YPK_1945 YPK_1945 YPK_1945 2158863 2159381 - methylated-DNA--protein-cysteine methyltransferase KEGG: ypk:y2131 O-6-alkylguanine-DNA/cysteine-protein methyltransferase~TIGRFAM: methylated-DNA--protein-cysteine methyltransferase~PFAM: methylguanine DNA methyltransferase ribonuclease domain protein%3B Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1945 YPK_1946 YPK_1946 YPK_1946 2159622 2161067 + Alkaline phosphatase PFAM: Alkaline phosphatase~KEGG: ypi:YpsIP31758_1835 alkaline phosphatase gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1946 YPK_1947 YPK_1947 YPK_1947 2161677 2164010 + conserved hypothetical protein KEGG: yps:YPTB2219 hypothetical protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1947 YPK_1948 YPK_1948 YPK_1948 2164156 2164830 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypm:YP_2081 haloacid dehalogenase-like hydrolase family protein gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1948 YPK_1949 YPK_1949 YPK_1949 2164897 2165244 - amino acid-binding ACT domain protein PFAM: amino acid-binding ACT domain protein~KEGG: ypi:YpsIP31758_1838 putative acetolactate synthase I%2C small subunit gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1949 YPK_1950 YPK_1950 YPK_1950 2165246 2166913 - acetolactate synthase%2C large subunit%2C biosynthetic type TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: ypm:YP_2079 putative acetolactate synthase large subunit gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1950 YPK_1951 YPK_1951 YPK_1951 2167466 2168260 + protein of unknown function DUF1460 PFAM: protein of unknown function DUF1460~KEGG: ypp:YPDSF_0850 lipoprotein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1951 YPK_1952 YPK_1952 YPK_1952 2168429 2170468 - putative virulence factor KEGG: yps:YPTB2214 putative virulence factor gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1952 YPK_1953 YPK_1953 YPK_1953 2170425 2171576 - putative virulence factor SrfB KEGG: ypi:YpsIP31758_1843 putative virulence factor SrfB gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1953 YPK_1954 YPK_1954 YPK_1954 2171581 2173134 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1844 hypothetical protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1954 YPK_1955 YPK_1955 YPK_1955 2173340 2174830 + AMP nucleosidase KEGG: ypm:YP_2074 putative AMP nucleosidase~TIGRFAM: AMP nucleosidase~PFAM: purine or other phosphorylase family 1 gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1955 YPK_1956 YPK_1956 YPK_1956 2175255 2176073 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypk:y2118 taurine ATP-binding component of a transport system gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1956 YPK_1957 YPK_1957 YPK_1957 2176083 2176904 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_2072 putative transport system permease gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1957 YPK_1958 YPK_1958 YPK_1958 2176908 2177939 - ABC transporter%2C periplasmic substrate-binding protein KEGG: ypi:YpsIP31758_1849 ABC transporter%2C periplasmic substrate-binding protein gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1958 YPK_1959 YPK_1959 YPK_1959 2178526 2178675 + hypothetical protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1959 YPK_1960 YPK_1960 YPK_1960 2178694 2179347 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1850 hypothetical protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1960 YPK_1961 YPK_1961 YPK_1961 2179344 2180882 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1851 ribose ABC transporter%2C ATP-binding protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1961 YPK_1962 YPK_1962 YPK_1962 2180909 2181970 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: yps:YPTB2205 ABC sugar/ribose transporter%2C permease subunit gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1962 YPK_1963 YPK_1963 YPK_1963 2182149 2183099 + periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_1853 ribose ABC transporter%2C periplasmic ribose-binding protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1963 YPK_1964 YPK_1964 YPK_1964 2183243 2183713 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1854 hypothetical protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1964 YPK_1965 YPK_1965 YPK_1965 2183777 2184793 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_1855 sugar-binding transcriptional regulator%2C LacI family gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1965 YPK_1966 YPK_1966 YPK_1966 2184750 2184866 - hypothetical protein gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1966 YPK_1967 YPK_1967 YPK_1967 2184938 2186392 + Na+/H+ antiporter NhaC PFAM: Na+/H+ antiporter NhaC~KEGG: ypi:YpsIP31758_1856 Na+/H+ antiporter NhaC gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1967 YPK_1968 YPK_1968 YPK_1968 2186379 2187557 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_1857 aminotransferase%2C classes I and II gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1968 YPK_1969 YPK_1969 YPK_1969 2187706 2187798 + conserved hypothetical protein KEGG: ype:YPO2282 hypothetical protein gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1969 YPK_1970 YPK_1970 YPK_1970 2188111 2188371 - Transposase and inactivated derivatives%2C TnpA family-like protein KEGG: ypm:YP_pCD93 putative transposase gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1970 YPK_1971 YPK_1971 YPK_1971 2188576 2189448 + hypothetical protein KEGG: bps:BPSS1385 ATP/GTP binding protein gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1971 YPK_1972 YPK_1972 YPK_1972 2189645 2190583 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: yps:YPTB2199 possible DMT superfamily metabolite efflux pump gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1972 YPK_1973 YPK_1973 YPK_1973 2191157 2192689 + conserved hypothetical protein KEGG: yps:YPTB2198 hypothetical protein gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1973 YPK_1974 YPK_1974 YPK_1974 2192970 2194490 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase_~KEGG: yps:YPTB2197 probable aldehyde dehydrogenase gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1974 YPK_1975 YPK_1975 YPK_1975 2194759 2196603 + GAF modulated sigma54 specific transcriptional regulator%2C Fis family PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type%3B GAF domain protein~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1863 sigma-54 dependent transcriptional regulator gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1975 YPK_1976 YPK_1976 YPK_1976 2196717 2197466 + short-chain dehydrogenase/reductase SDR PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypi:YpsIP31758_1864 oxidoreductase%2C short chain dehydrogenase/reductase family protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1976 YPK_1977 YPK_1977 YPK_1977 2197693 2198067 + protein of unknown function DUF1283 PFAM: protein of unknown function DUF1283~KEGG: ypi:YpsIP31758_1865 hypothetical protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1977 YPK_1978 YPK_1978 YPK_1978 2198281 2198526 + protein of unknown function DUF1161 PFAM: protein of unknown function DUF1161~KEGG: ypi:YpsIP31758_1866 putative lipoprotein gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1978 YPK_1979 YPK_1979 YPK_1979 2198672 2199952 + Chloride channel core PFAM: Chloride channel core~KEGG: yps:YPTB2192 chloride channel%2C ClC family gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1979 YPK_1980 YPK_1980 YPK_1980 2200057 2200725 - dethiobiotin synthase KEGG: ypi:YpsIP31758_1868 dethiobiotin synthase~TIGRFAM: dethiobiotin synthase~PFAM: Cobyrinic acid ac-diamide synthase gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1980 YPK_1981 YPK_1981 YPK_1981 2200949 2202166 - ROK family protein PFAM: ROK family protein~KEGG: ypi:YpsIP31758_1869 Mlc protein gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1981 YPK_1982 YPK_1982 YPK_1982 2202345 2203259 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: yps:YPTB2189 hypothetical protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1982 YPK_1983 YPK_1983 YPK_1983 2203472 2204770 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB2188 putative MFS multidrug efflux pump gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1983 YPK_1984 YPK_1984 YPK_1984 2204936 2205910 + DNA replication terminus site-binding protein TIGRFAM: DNA replication terminus site-binding protein~PFAM: site-binding protein DNA replication region~KEGG: ypp:YPDSF_0868 DNA replication terminus site-binding protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1984 YPK_1985 YPK_1985 YPK_1985 2205990 2207387 - fumarate hydratase%2C class II TIGRFAM: fumarate hydratase%2C class II~PFAM: fumarate lyase~KEGG: ypp:YPDSF_0869 fumarate hydratase%2C class II gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1985 YPK_1986 YPK_1986 YPK_1986 2207767 2208846 + mannose-6-phosphate isomerase%2C class I TIGRFAM: mannose-6-phosphate isomerase%2C class I~PFAM: mannose-6-phosphate isomerase type I~KEGG: ypi:YpsIP31758_1874 mannose-6-phosphate isomerase%2C class I gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1986 YPK_1987 YPK_1987 YPK_1987 2209086 2210630 + protein of unknown function DUF945 PFAM: protein of unknown function DUF945~KEGG: ypi:YpsIP31758_1875 hypothetical protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1987 YPK_1988 YPK_1988 YPK_1988 2210847 2211596 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain protein~KEGG: yps:YPTB2183 putative transcriptional regulator gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1988 YPK_1989 YPK_1989 YPK_1989 2211851 2211946 + hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1989 YPK_1990 YPK_1990 YPK_1990 2211970 2212899 + conserved hypothetical protein KEGG: yps:YPTB2182 hypothetical protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1990 YPK_1991 YPK_1991 YPK_1991 2213072 2214329 - conserved hypothetical protein pseudogene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1991 YPK_1993 YPK_1993 YPK_1993 2214718 2215722 + adenosine deaminase KEGG: ypi:YpsIP31758_1878 adenosine deaminase~TIGRFAM: adenosine deaminase~PFAM: adenosine/AMP deaminase gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1993 YPK_1994 YPK_1994 YPK_1994 2215897 2216925 - conserved hypothetical protein KEGG: ypm:YP_2056 hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1994 YPK_1995 YPK_1995 YPK_1995 2217119 2218168 - oxidoreductase domain protein PFAM: Semialdehyde dehydrogenase NAD - binding%3B oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: ypi:YpsIP31758_1881 oxidoreductase%2C Gfo/Idh/MocA family protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1995 YPK_1996 YPK_1996 YPK_1996 2218296 2219228 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B AraC protein arabinose-binding/dimerisation~KEGG: ypi:YpsIP31758_1882 arabinose operon regulatory protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1996 YPK_1997 YPK_1997 YPK_1997 2219463 2220512 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_1883 L-arabinose ABC transporter%2C permease protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1997 YPK_1998 YPK_1998 YPK_1998 2220530 2222101 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_1884 L-arabinose ABC transporter%2C ATP-binding protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1998 YPK_1999 YPK_1999 YPK_1999 2222199 2223182 - Monosaccharide-transporting ATPase PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_2051 L-arabinose-binding periplasmic protein precursor gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_1999 YPK_2000 YPK_2000 YPK_2000 2223590 2225293 + L-ribulokinase TIGRFAM: L-ribulokinase~PFAM: carbohydrate kinase FGGY~KEGG: yps:YPTB2173 ribulokinase gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2000 YPK_2001 YPK_2001 YPK_2001 2225377 2226879 + L-arabinose isomerase PFAM: L-arabinose isomerase~KEGG: ypi:YpsIP31758_1887 L-arabinose isomerase gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2001 YPK_2002 YPK_2002 YPK_2002 2227141 2229279 - type I secretion system ATPase KEGG: ypi:YpsIP31758_1889 type I secretion system ATPase~TIGRFAM: type I secretion system ATPase~PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2002 YPK_2003 YPK_2003 YPK_2003 2229281 2230651 - type I secretion membrane fusion protein%2C HlyD family TIGRFAM: type I secretion membrane fusion protein%2C HlyD family~PFAM: secretion protein HlyD family protein~KEGG: ypi:YpsIP31758_1890 type I secretion membrane fusion protein%2C HlyD family protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2003 YPK_2004 YPK_2004 YPK_2004 2230676 2232823 - type I secretion system ATPase KEGG: ypi:YpsIP31758_1891 toxin ABC transporter%2C ATP-binding/permease protein~TIGRFAM: type I secretion system ATPase~PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2004 YPK_2005 YPK_2005 YPK_2005 2233298 2233741 + conserved hypothetical protein KEGG: ypm:YP_2045 hypothetical protein gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2005 YPK_2006 YPK_2006 YPK_2006 2233869 2234450 + electron transport complex%2C RnfABCDGE type%2C A subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C A subunit~PFAM: RnfA-Nqr electron transport subunit~KEGG: ypm:YP_2044 putative membrane protein gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2006 YPK_2007 YPK_2007 YPK_2007 2234450 2235073 + electron transport complex%2C RnfABCDGE type%2C B subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C B subunit~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B Fe-S cluster domain protein~KEGG: ypi:YpsIP31758_1895 electron transport complex%2C RnfABCDGE type%2C B subunit gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2007 YPK_2008 YPK_2008 YPK_2008 2235066 2237162 + electron transport complex%2C RnfABCDGE type%2C C subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C C subunit~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B Respiratory-chain NADH dehydrogenase domain 51 kDa subunit~KEGG: ypi:YpsIP31758_1896 electron transport complex%2C RnfABCDGE type%2C C subunit gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2008 YPK_2009 YPK_2009 YPK_2009 2237267 2238160 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: ypi:YpsIP31758_1897 transcriptional regulator%2C AraC family gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2009 YPK_2010 YPK_2010 YPK_2010 2238649 2239743 + electron transport complex%2C RnfABCDGE type%2C D subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C D subunit~PFAM: NQR2 and RnfD family protein~KEGG: ypm:YP_2040 putative integral membrane protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2010 YPK_2011 YPK_2011 YPK_2011 2239753 2240382 + electron transport complex%2C RnfABCDGE type%2C G subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C G subunit~PFAM: FMN-binding domain protein~KEGG: ypm:YP_2039 putative exported protein gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2011 YPK_2012 YPK_2012 YPK_2012 2240379 2241080 + electron transport complex%2C RnfABCDGE type%2C E subunit TIGRFAM: electron transport complex%2C RnfABCDGE type%2C E subunit~PFAM: RnfA-Nqr electron transport subunit~KEGG: yps:YPTB2161 putative membrane protein gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2012 YPK_2013 YPK_2013 YPK_2013 2241077 2241718 + endonuclease III KEGG: ypm:YP_2037 endonuclease III~TIGRFAM: endonuclease III~PFAM: helix-hairpin-helix motif%3B HhH-GPD family protein~SMART: iron-sulfur cluster loop gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2013 YPK_2014 YPK_2014 YPK_2014 2241900 2242898 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B Male sterility domain~KEGG: yps:YPTB2159 hypothetical protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2014 YPK_2015 YPK_2015 YPK_2015 2242943 2244253 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_1903 transporter%2C major facilitator family gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2015 YPK_2016 YPK_2016 YPK_2016 2244902 2246836 + exoribonuclease II KEGG: ypp:YPDSF_0899 exoribonuclease II~TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease%3B exoribonuclease II~PFAM: ribonuclease II%3B RNA binding S1 domain protein%3B Ribonuclease B OB region domain~SMART: Cold shock protein gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2016 YPK_2017 YPK_2017 YPK_2017 2247186 2249252 + carbon starvation protein CstA PFAM: carbon starvation protein CstA~KEGG: ypm:YP_2033 carbon starvation protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2017 YPK_2018 YPK_2018 YPK_2018 2249245 2249550 + protein of unknown function DUF466 PFAM: protein of unknown function DUF466~KEGG: ypm:YP_2032 uncharacterized small protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2018 YPK_2019 YPK_2019 YPK_2019 2249667 2250332 - transaldolase KEGG: ypi:YpsIP31758_1908 putative fructose-6-phosphate aldolase~TIGRFAM: transaldolase~PFAM: Transaldolase gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2019 YPK_2020 YPK_2020 YPK_2020 2250666 2250914 + conserved hypothetical protein KEGG: ypm:YP_2030 hypothetical protein gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2020 YPK_2021 YPK_2021 YPK_2021 2250943 2251638 - L-ribulose-5-phosphate 4-epimerase KEGG: ypm:YP_2029 L-ribulose-5-phosphate 4-epimerase~TIGRFAM: L-ribulose-5-phosphate 4-epimerase~PFAM: class II aldolase/adducin family protein gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2021 YPK_2022 YPK_2022 YPK_2022 2252120 2252335 + osmotically inducible lipoprotein B precursor KEGG: ypm:YP_2028 osmotically inducible lipoprotein B precursor gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2022 YPK_2023 YPK_2023 YPK_2023 2252638 2252964 - translation initiation factor SUI1 PFAM: translation initiation factor SUI1~KEGG: ypm:YP_2027 translation initiation factor SUI1 familyprotein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2023 YPK_2024 YPK_2024 YPK_2024 2252964 2253701 - orotidine 5'-phosphate decarboxylase KEGG: ypm:YP_2026 orotidine 5'-phosphate decarboxylase~TIGRFAM: orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2024 YPK_2025 YPK_2025 YPK_2025 2254170 2254469 + conserved hypothetical protein KEGG: ypi:YpsIP31758_1914 hypothetical protein gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2025 YPK_2026 YPK_2026 YPK_2026 2254591 2255760 - Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: ypi:YpsIP31758_1915 tetratricopeptide repeat protein gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2026 YPK_2027 YPK_2027 YPK_2027 2255767 2256078 - protein of unknown function DUF1049 PFAM: protein of unknown function DUF1049~KEGG: ypm:YP_2023 hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2027 YPK_2028 YPK_2028 YPK_2028 2256259 2257020 - Phosphatidylglycerophosphatase PFAM: phosphoesterase PA-phosphatase related~KEGG: ypi:YpsIP31758_1917 PAP2 family protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2028 YPK_2029 YPK_2029 YPK_2029 2257514 2258116 + GTP cyclohydrolase II PFAM: GTP cyclohydrolase II~KEGG: ypm:YP_2020 GTP cyclohydrolase II gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2029 YPK_2030 YPK_2030 YPK_2030 2258280 2260952 - aconitate hydratase 1 TIGRFAM: aconitate hydratase 1~PFAM: aconitate hydratase domain protein~KEGG: ypp:YPDSF_0913 aconitate hydratase 1 gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2030 YPK_2031 YPK_2031 YPK_2031 2261316 2262167 - conserved hypothetical protein KEGG: ypp:YPDSF_0914 hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2031 YPK_2032 YPK_2032 YPK_2032 2262503 2263477 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_2017 transcriptional regulator for cysteine regulon gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2032 YPK_2033 YPK_2033 YPK_2033 2263875 2266490 - DNA topoisomerase I KEGG: ypi:YpsIP31758_1923 DNA topoisomerase I~TIGRFAM: DNA topoisomerase I~PFAM: TOPRIM domain protein%3B DNA topoisomerase I zinc ribbon domain protein %3B DNA topoisomerase type IA central domain protein%3B DNA topoisomerase type IA zn finger domain protein~SMART: DNA topoisomerase I ATP-binding%3B DNA topoisomerase I DNA-binding%3B Toprim sub domain protein gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2033 YPK_2034 YPK_2034 YPK_2034 2266517 2266816 - conserved hypothetical protein KEGG: ypn:YPN_1685 hypothetical protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2034 YPK_2035 YPK_2035 YPK_2035 2266909 2267160 + conserved hypothetical protein KEGG: yps:YPTB2139 hypothetical protein gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2035 YPK_2036 YPK_2036 YPK_2036 2267279 2268325 - Peptidase S49 domain protein PFAM: peptidase S49%3B Peptidase S49 domain protein~KEGG: ypi:YpsIP31758_1925 peptidase%2C S49 family gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2036 YPK_2037 YPK_2037 YPK_2037 2268497 2269258 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypm:YP_2012 short chain dehydrogenase gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2037 YPK_2038 YPK_2038 YPK_2038 2269275 2269865 + cob(I)alamin adenosyltransferase KEGG: ypi:YpsIP31758_1927 cob(I)alamin adenosyltransferase~TIGRFAM: cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2038 YPK_2039 YPK_2039 YPK_2039 2269988 2271022 - pseudouridine synthase PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase~KEGG: yps:YPTB2135 putative RNA pseudouridylate synthase-family protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2039 YPK_2040 YPK_2040 YPK_2040 2271352 2271972 - Sua5/YciO/YrdC/YwlC family protein TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain~KEGG: ypi:YpsIP31758_1929 SUA5/YciO/YrdC/YwlC family protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2040 YPK_2041 YPK_2041 YPK_2041 2271989 2272924 - PHP domain protein PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~KEGG: ypp:YPDSF_0924 hypothetical protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2041 YPK_2042 YPK_2042 YPK_2042 2273340 2274905 + anthranilate synthase component I KEGG: yps:YPTB2130 anthranilate synthase component I~TIGRFAM: anthranilate synthase component I~PFAM: Anthranilate synthase component I domain protein%3B Chorismate binding-like gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2042 YPK_2043 YPK_2043 YPK_2043 2274905 2275483 + glutamine amidotransferase of anthranilate synthase TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I~KEGG: ypi:YpsIP31758_1933 anthranilate synthase component II gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2043 YPK_2044 YPK_2044 YPK_2044 2275498 2276496 + anthranilate phosphoribosyltransferase KEGG: ypi:YpsIP31758_1934 anthranilate phosphoribosyltransferase~TIGRFAM: anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2044 YPK_2045 YPK_2045 YPK_2045 2276500 2277927 + Indole-3-glycerol-phosphate synthase.%2C Phosphoribosylanthranilate isomerase PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)%3B Indole-3-glycerol phosphate synthase~KEGG: ypi:YpsIP31758_1935 tryptophan biosynthesis protein trpCF gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2045 YPK_2046 YPK_2046 YPK_2046 2278062 2279252 + tryptophan synthase%2C beta subunit TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypi:YpsIP31758_1936 tryptophan synthase%2C beta subunit gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2046 YPK_2047 YPK_2047 YPK_2047 2279252 2280058 + tryptophan synthase%2C alpha subunit KEGG: ypi:YpsIP31758_1937 tryptophan synthase%2C alpha subunit~TIGRFAM: tryptophan synthase%2C alpha subunit~PFAM: tryptophan synthase alpha chain gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2047 YPK_2048 YPK_2048 YPK_2048 2280401 2280715 + transport-associated PFAM: transport-associated~SMART: Transport-associated and nodulation region~KEGG: ypi:YpsIP31758_1939 putative phospholipid-binding domain protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2048 YPK_2049 YPK_2049 YPK_2049 2280862 2281497 - OmpW family protein PFAM: OmpW family protein~KEGG: yps:YPTB2123 outer membrane protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2049 YPK_2050 YPK_2050 YPK_2050 2281983 2282753 + protein of unknown function UPF0259 PFAM: protein of unknown function UPF0259~KEGG: ypi:YpsIP31758_1942 hypothetical protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2050 YPK_2051 YPK_2051 YPK_2051 2282874 2284613 - sulphate transporter PFAM: Sulfate transporter/antisigma-factor antagonist STAS%3B sulphate transporter~KEGG: ypi:YpsIP31758_1943 sulfate permease family protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2051 YPK_2052 YPK_2052 YPK_2052 2284555 2284656 - hypothetical protein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2052 YPK_2053 YPK_2053 YPK_2053 2284844 2285386 + intracellular septation protein A TIGRFAM: intracellular septation protein A~PFAM: Intracellular septation protein A~KEGG: ypm:YP_1995 putative intracellular septation protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2053 YPK_2054 YPK_2054 YPK_2054 2285466 2285915 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ypi:YpsIP31758_1945 thioesterase family protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2054 YPK_2055 YPK_2055 YPK_2055 2285984 2286754 - TonB family protein TIGRFAM: TonB family protein~PFAM: Gram-negative tonB protein~KEGG: ypp:YPDSF_0941 TonB protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2055 YPK_2056 YPK_2056 YPK_2056 2286786 2286908 - hypothetical protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2056 YPK_2057 YPK_2057 YPK_2057 2287106 2287351 + YCII-related PFAM: YCII-related~KEGG: ypi:YpsIP31758_1947 YciI domain protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2057 YPK_2058 YPK_2058 YPK_2058 2287589 2287834 + conserved hypothetical protein KEGG: ypm:YP_1990 hypothetical protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2058 YPK_2059 YPK_2059 YPK_2059 2287950 2288213 - conserved hypothetical protein KEGG: ypm:YP_1989 hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2059 YPK_2060 YPK_2060 YPK_2060 2288330 2288458 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1950 hypothetical protein gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2060 YPK_2061 YPK_2061 YPK_2061 2288433 2288972 - virulence-related outer membrane protein PFAM: virulence-related outer membrane protein~KEGG: ypi:YpsIP31758_1951 Ail/Lom family protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2061 YPK_2062 YPK_2062 YPK_2062 2289812 2289949 + conserved hypothetical protein KEGG: yps:YPTB2112 hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2062 YPK_2063 YPK_2063 YPK_2063 2290018 2291478 + phospholipase D/Transphosphatidylase PFAM: phospholipase D/Transphosphatidylase~KEGG: ypm:YP_1986 cardiolipin synthetase gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2063 YPK_2064 YPK_2064 YPK_2064 2291613 2291966 + protein of unknown function DUF440 PFAM: protein of unknown function DUF440~KEGG: ypp:YPDSF_0948 hypothetical protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2064 YPK_2065 YPK_2065 YPK_2065 2292265 2292480 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1955 hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2065 YPK_2066 YPK_2066 YPK_2066 2293051 2294052 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: ypm:YP_1983 oligopeptide transport ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2066 YPK_2067 YPK_2067 YPK_2067 2294049 2295050 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: ypm:YP_1982 oligopeptide transport ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2067 YPK_2068 YPK_2068 YPK_2068 2295062 2295967 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_1981 oligopeptide transport system permease protein gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2068 YPK_2069 YPK_2069 YPK_2069 2295986 2296906 - Alkaline phosphatase PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_1980 oligopeptide transport system permease protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2069 YPK_2070 YPK_2070 YPK_2070 2296993 2298630 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: yps:YPTB2105 ABC transporter%2C periplasmic oligopeptide-binding protein oppA gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2070 YPK_2071 YPK_2071 YPK_2071 2299467 2300111 - multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: ypi:YpsIP31758_1962 hypothetical protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2071 YPK_2072 YPK_2072 YPK_2072 2300981 2303656 + iron-containing alcohol dehydrogenase PFAM: iron-containing alcohol dehydrogenase%3B Aldehyde Dehydrogenase_~KEGG: ypm:YP_1976 aldehyde-alcohol dehydrogenase gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2072 YPK_2073 YPK_2073 YPK_2073 2304407 2304997 - Thymidine kinase PFAM: thymidine kinase~KEGG: ypi:YpsIP31758_1964 thymidine kinase gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2073 YPK_2074 YPK_2074 YPK_2074 2305747 2306154 + histone family protein nucleoid-structuring protein H-NS PFAM: histone family protein nucleoid-structuring protein H-NS~KEGG: ypi:YpsIP31758_1966 DNA-binding protein H-NS gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2074 YPK_2075 YPK_2075 YPK_2075 2306168 2306320 - hypothetical protein gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2075 YPK_2076 YPK_2076 YPK_2076 2306412 2306579 - hypothetical protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2076 YPK_2077 YPK_2077 YPK_2077 2306589 2307935 - nucleotide sugar dehydrogenase KEGG: ypi:YpsIP31758_1968 UDP-glucose/GDP-mannose dehydrogenase family protein~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2077 YPK_2078 YPK_2078 YPK_2078 2308242 2309258 - response regulator receiver protein PFAM: response regulator receiver~KEGG: ypk:y2148 Hnr protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2078 YPK_2079 YPK_2079 YPK_2079 2310592 2311056 + SEC-C motif domain protein PFAM: SEC-C motif domain protein~KEGG: ypp:YPDSF_0962 hypothetical protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2079 YPK_2080 YPK_2080 YPK_2080 2311140 2311988 + formyltetrahydrofolate deformylase TIGRFAM: formyltetrahydrofolate deformylase~PFAM: formyl transferase domain protein%3B amino acid-binding ACT domain protein~KEGG: ypm:YP_1970 formyltetrahydrofolate deformylase gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2080 YPK_2082 YPK_2082 YPK_2082 2312422 2312544 - hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2082 YPK_2083 YPK_2083 YPK_2083 2312878 2313738 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR~KEGG: ypi:YpsIP31758_1974 transcriptional regulator%2C LysR family gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2083 YPK_2084 YPK_2084 YPK_2084 2314110 2314238 - conserved hypothetical protein KEGG: ypi:YpsIP31758_1975 hypothetical protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2084 YPK_2085 YPK_2085 YPK_2085 2314548 2315354 + exodeoxyribonuclease III TIGRFAM: exodeoxyribonuclease III%3B exodeoxyribonuclease III Xth~PFAM: Endonuclease/exonuclease/phosphatase~KEGG: ypi:YpsIP31758_1976 exodeoxyribonuclease III gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2085 YPK_2086 YPK_2086 YPK_2086 2315452 2315838 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypm:YP_1967 putative pyrophosphohydrolase gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2086 YPK_2087 YPK_2087 YPK_2087 2315851 2316141 - protein of unknown function DUF1496 PFAM: protein of unknown function DUF1496~KEGG: ypk:y2155 hypothetical protein gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2087 YPK_2088 YPK_2088 YPK_2088 2316138 2318066 - DNA topoisomerase III KEGG: ype:YPO2165 DNA topoisomerase III~TIGRFAM: DNA topoisomerase III~PFAM: TOPRIM domain protein%3B DNA topoisomerase type IA central domain protein~SMART: DNA topoisomerase I ATP-binding%3B DNA topoisomerase I DNA-binding%3B Toprim sub domain protein gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2088 YPK_2089 YPK_2089 YPK_2089 2318140 2319186 - selenide%2C water dikinase TIGRFAM: selenide%2C water dikinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein~KEGG: ypi:YpsIP31758_1980 selenide%2C water dikinase gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2089 YPK_2090 YPK_2090 YPK_2090 2319411 2319962 - nitroreductase PFAM: nitroreductase~KEGG: ypm:YP_1963 putative nitroreductase gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2090 YPK_2091 YPK_2091 YPK_2091 2320125 2321975 + signal peptide peptidase SppA%2C 67K type KEGG: yps:YPTB2088 protease IV~TIGRFAM: signal peptide peptidase SppA%2C 67K type%3B signal peptide peptidase SppA%2C 36K type~PFAM: peptidase S49 gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2091 YPK_2092 YPK_2092 YPK_2092 2322092 2323108 + L-asparaginase%2C type I KEGG: ypi:YpsIP31758_1983 L-asparaginase I~TIGRFAM: L-asparaginase%2C type I~PFAM: Asparaginase/glutaminase gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2092 YPK_2093 YPK_2093 YPK_2093 2323123 2323770 + Nicotinamidase PFAM: isochorismatase hydrolase~KEGG: yps:YPTB2086 putative pyrazinamidase/nicotinamidase gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2093 YPK_2094 YPK_2094 YPK_2094 2323904 2324278 - protein of unknown function DUF1315 PFAM: protein of unknown function DUF1315~KEGG: ypp:YPDSF_0975 hypothetical protein gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2094 YPK_2095 YPK_2095 YPK_2095 2324247 2324660 - methionine-R-sulfoxide reductase TIGRFAM: methionine-R-sulfoxide reductase~PFAM: Methionine sulfoxide reductase B~KEGG: ypi:YpsIP31758_1986 methionine-R-sulfoxide reductase gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2095 YPK_2096 YPK_2096 YPK_2096 2325008 2326003 + glyceraldehyde-3-phosphate dehydrogenase%2C type I KEGG: ypm:YP_1957 glyceraldehyde 3-phosphate dehydrogenase A~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: glyceraldehyde 3-phosphate dehydrogenase gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2096 YPK_2097 YPK_2097 YPK_2097 2326327 2327202 + Aldose 1-epimerase PFAM: Aldose 1-epimerase~KEGG: ypm:YP_1956 uncharacterized enzyme related to aldose 1-epimerase gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2097 YPK_2098 YPK_2098 YPK_2098 2327275 2328045 - MltA-interacting MipA family protein PFAM: MltA-interacting MipA family protein~KEGG: ypi:YpsIP31758_1990 MltA-interacting protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2098 YPK_2099 YPK_2099 YPK_2099 2328208 2328420 - hypothetical protein gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2099 YPK_2100 YPK_2100 YPK_2100 2328468 2330402 + putative serine protein kinase%2C PrkA PFAM: PrkA serine kinase%3B PrkA AAA domain protein~KEGG: ypi:YpsIP31758_1991 PrkA serine protein kinase gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2100 YPK_2101 YPK_2101 YPK_2101 2330446 2330568 + hypothetical protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2101 YPK_2102 YPK_2102 YPK_2102 2330552 2331826 + protein of unknown function DUF444 PFAM: protein of unknown function DUF444~KEGG: ypi:YpsIP31758_1992 hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2102 YPK_2103 YPK_2103 YPK_2103 2331934 2333052 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypm:YP_1952 hypothetical protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2103 YPK_2104 YPK_2104 YPK_2104 2333087 2333992 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_1951 LysR-family transcriptional regulatory protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2104 YPK_2105 YPK_2105 YPK_2105 2334190 2335059 + Pirin domain protein PFAM: Pirin domain protein~KEGG: ypm:YP_1950 pirin-related protein gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2105 YPK_2106 YPK_2106 YPK_2106 2335324 2336517 + drug resistance transporter%2C Bcr/CflA subfamily TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_1996 drug resistance transporter%2C Bcr/CflA family gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2106 YPK_2107 YPK_2107 YPK_2107 2336546 2337850 - D-amino-acid dehydrogenase PFAM: FAD dependent oxidoreductase~KEGG: ypm:YP_1948 D-amino acid dehydrogenase small subunit gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2107 YPK_2108 YPK_2108 YPK_2108 2338316 2339851 + SpoVR family protein PFAM: SpoVR family protein~KEGG: ypi:YpsIP31758_1998 SpoVR family protein gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2108 YPK_2109 YPK_2109 YPK_2109 2340069 2340788 - fatty acid metabolism transcriptional regulator FadR TIGRFAM: fatty acid metabolism transcriptional regulator FadR~PFAM: regulatory protein GntR HTH%3B fatty acid responsive transcription factor FadR domain protein~KEGG: ypi:YpsIP31758_1999 fatty acid metabolism transcriptional regulator FadR gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2109 YPK_2110 YPK_2110 YPK_2110 2341032 2342606 + Na+/H+ antiporter NhaB TIGRFAM: Na+/H+ antiporter NhaB~PFAM: Na+H+ antiporter NhaB%3B Citrate transporter~KEGG: ypi:YpsIP31758_2000 Na+/H+ antiporter NhaB gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2110 YPK_2111 YPK_2111 YPK_2111 2342842 2343483 + Disulphide bond formation protein DsbB PFAM: Disulphide bond formation protein DsbB~KEGG: ypi:YpsIP31758_2001 disulfide bond formation protein DsbB gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2111 YPK_2112 YPK_2112 YPK_2112 2343449 2343652 - hypothetical protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2112 YPK_2113 YPK_2113 YPK_2113 2343789 2344145 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2002 hypothetical protein gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2113 YPK_2114 YPK_2114 YPK_2114 2345237 2345977 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2003 hypothetical protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2114 YPK_2115 YPK_2115 YPK_2115 2345994 2347193 + aminotransferase class V PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: ypi:YpsIP31758_2004 aminotransferase%2C class V gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2115 YPK_2116 YPK_2116 YPK_2116 2347197 2348369 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_1940 hypothetical protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2116 YPK_2117 YPK_2117 YPK_2117 2348470 2348916 - protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: ypi:YpsIP31758_2006 hypothetical protein gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2117 YPK_2118 YPK_2118 YPK_2118 2349019 2349675 - fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: ypk:y2229 isomerase gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2118 YPK_2119 YPK_2119 YPK_2119 2349746 2350831 - lytic murein transglycosylase TIGRFAM: lytic murein transglycosylase~KEGG: ypi:YpsIP31758_2008 lytic murein transglycosylase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2119 YPK_2120 YPK_2120 YPK_2120 2350972 2351244 - protein of unknown function DUF709 PFAM: protein of unknown function DUF709~KEGG: ypi:YpsIP31758_2009 hypothetical protein gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2120 YPK_2121 YPK_2121 YPK_2121 2351965 2352651 + septum site-determining protein MinC TIGRFAM: septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC%3B Septum formation inhibitor MinC domain protein~KEGG: ypm:YP_1921 cell division inhibitor gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2121 YPK_2122 YPK_2122 YPK_2122 2352676 2353488 + septum site-determining protein MinD TIGRFAM: septum site-determining protein MinD~PFAM: Cobyrinic acid ac-diamide synthase~KEGG: ypi:YpsIP31758_2011 septum site-determining protein MinD gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2122 YPK_2123 YPK_2123 YPK_2123 2353492 2353761 + cell division topological specificity factor MinE TIGRFAM: cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~KEGG: ypm:YP_1919 cell division topological specificity factor gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2123 YPK_2124 YPK_2124 YPK_2124 2353998 2355119 - ribonuclease D TIGRFAM: ribonuclease D~PFAM: HRDC domain protein%3B 3'-5' exonuclease~KEGG: ypp:YPDSF_1046 ribonuclease D gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2124 YPK_2125 YPK_2125 YPK_2125 2355279 2356967 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ypm:YP_1917 long-chain-fatty-acid-CoA ligase gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2125 YPK_2126 YPK_2126 YPK_2126 2357610 2358215 - outer membrane lipoprotein%2C Slp family TIGRFAM: outer membrane lipoprotein%2C Slp family~PFAM: outer membrane lipoprotein Slp~KEGG: ypm:YP_1916 putative outer membrane protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2126 YPK_2127 YPK_2127 YPK_2127 2358352 2359050 - peptidase M22 glycoprotease PFAM: peptidase M22 glycoprotease~KEGG: ypm:YP_1915 inactive homologs of metal-dependent protease%2C putative molecular chaperones gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2127 YPK_2128 YPK_2128 YPK_2128 2359122 2361026 - helicase c2 SMART: helicase c2%3B DEAD-like helicases~KEGG: ypi:YpsIP31758_2017 hypothetical protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2128 YPK_2129 YPK_2129 YPK_2129 2361157 2361501 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: ypi:YpsIP31758_2018 endoribonuclease L-PSP gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2129 YPK_2130 YPK_2130 YPK_2130 2361718 2362047 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: ypm:YP_1912 putative integral membrane protein gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2130 YPK_2131 YPK_2131 YPK_2131 2362034 2362477 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: yps:YPTB2051 DMT superfamily drug efflux pump gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2131 YPK_2132 YPK_2132 YPK_2132 2363192 2363833 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~PFAM: KDPG and KHG aldolase~KEGG: ypp:YPDSF_1055 KHG/KDPG aldolase gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2132 YPK_2133 YPK_2133 YPK_2133 2363840 2364031 - hypothetical protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2133 YPK_2134 YPK_2134 YPK_2134 2364075 2365559 - glucose-6-phosphate 1-dehydrogenase KEGG: ypi:YpsIP31758_2022 glucose-6-phosphate 1-dehydrogenase~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2134 YPK_2135 YPK_2135 YPK_2135 2365876 2366781 + transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: ypp:YPDSF_1057 hex regulon repressor gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2135 YPK_2136 YPK_2136 YPK_2136 2367143 2368585 + pyruvate kinase KEGG: ypm:YP_1907 pyruvate kinase II~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2136 YPK_2137 YPK_2137 YPK_2137 2368738 2369019 + hypothetical protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2137 YPK_2138 YPK_2138 YPK_2138 2368925 2369887 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase~PFAM: lipid A biosynthesis acyltransferase~KEGG: ypm:YP_1906 lipid A biosynthesis acyltransferase gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2138 YPK_2139 YPK_2139 YPK_2139 2370154 2371470 - peptidase M23B PFAM: Peptidoglycan-binding LysM%3B peptidase M23B%3B Opacity-associated protein A%3B Opacity-associated protein A domain protein~KEGG: ypm:YP_1905 putative M23/M37 peptidase-family protein gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2139 YPK_2140 YPK_2140 YPK_2140 2371491 2372447 - periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: ypm:YP_1904 exported high-affinity zinc uptake system protein gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2140 YPK_2141 YPK_2141 YPK_2141 2372520 2373281 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2028 high-affinity zinc uptake ABC transporter%2C ATP-binding protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2141 YPK_2142 YPK_2142 YPK_2142 2373278 2374063 + ABC-3 protein PFAM: transport system permease protein%3B ABC-3 protein~KEGG: ypi:YpsIP31758_2029 high-affinity zinc uptake ABC transporter%2C permease protein gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2142 YPK_2143 YPK_2143 YPK_2143 2374118 2375122 - Holliday junction DNA helicase RuvB KEGG: ypi:YpsIP31758_2030 Holliday junction DNA helicase RuvB~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2143 YPK_2144 YPK_2144 YPK_2144 2375285 2375899 - Holliday junction DNA helicase RuvA KEGG: yps:YPTB2040 Holliday junction DNA helicase~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: helix-hairpin-helix motif%3B RuvA domain protein%3B DNA recombination protein RuvA domain I~SMART: Helix-hairpin-helix DNA-binding class 1 gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2144 YPK_2145 YPK_2145 YPK_2145 2376206 2376727 - crossover junction endodeoxyribonuclease RuvC KEGG: ypi:YpsIP31758_2032 crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2145 YPK_2146 YPK_2146 YPK_2146 2376936 2377679 - protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: ypi:YpsIP31758_2033 conserved hypothetical protein TIGR01033 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2146 YPK_2147 YPK_2147 YPK_2147 2377737 2378180 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_2034 putative dATP pyrophosphohydrolase gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2147 YPK_2148 YPK_2148 YPK_2148 2378180 2379976 - aspartyl-tRNA synthetase TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B GAD domain protein%3B tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: ypi:YpsIP31758_2035 aspartyl-tRNA synthetase gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2148 YPK_2149 YPK_2149 YPK_2149 2380839 2381654 + protein of unknown function DUF72 PFAM: protein of unknown function DUF72~KEGG: ypi:YpsIP31758_2036 hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2149 YPK_2150 YPK_2150 YPK_2150 2381834 2382229 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2037 hypothetical protein gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2150 YPK_2151 YPK_2151 YPK_2151 2382419 2383222 + methyltransferase TIGRFAM: methyltransferase~PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypi:YpsIP31758_2038 putative methyltransferase gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2151 YPK_2152 YPK_2152 YPK_2152 2383219 2384190 + methyltransferase TIGRFAM: methyltransferase~PFAM: methyltransferase putative%3B Methyltransferase type 11~KEGG: ypm:YP_1892 SAM-dependent methyltransferase gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2152 YPK_2153 YPK_2153 YPK_2153 2384383 2385147 - CutC family protein PFAM: CutC family protein~KEGG: yps:YPTB2031 putative copper homeostasis protein gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2153 YPK_2154 YPK_2154 YPK_2154 2385379 2385954 - protein of unknown function DUF991 PFAM: protein of unknown function DUF991~KEGG: ypi:YpsIP31758_2041 hypothetical protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2154 YPK_2155 YPK_2155 YPK_2155 2386571 2388301 + arginyl-tRNA synthetase KEGG: yps:YPTB2029 arginyl-tRNA synthetase~TIGRFAM: arginyl-tRNA synthetase gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2155 YPK_2156 YPK_2156 YPK_2156 2388368 2393263 - filamentous haemagglutinin domain protein PFAM: Haemagluttinin repeat-containing protein%3B filamentous haemagglutinin domain protein~KEGG: ypa:YPA_1427 putative hemolysin gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2156 YPK_2157 YPK_2157 YPK_2157 2393293 2394954 - Hemolysin activator HlyB domain protein PFAM: Hemolysin activator HlyB domain protein%3B Polypeptide-transport-associated domain protein ShlB-type~KEGG: ypp:YPDSF_1079 hemolysin activator protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2157 YPK_2158 YPK_2158 YPK_2158 2395386 2397014 - integral membrane protein MviN TIGRFAM: integral membrane protein MviN~PFAM: virulence factor MVIN family protein~KEGG: yps:YPTB2026 virulence factor mviN%2C possible MOP superfamliy efflux pump gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2158 YPK_2159 YPK_2159 YPK_2159 2397187 2398810 - oxidoreductase domain protein pseudogene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2159 YPK_2161 YPK_2161 YPK_2161 2398818 2399402 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypi:YpsIP31758_2049 ribosomal-protein-alanine acetyltransferase gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2161 YPK_2162 YPK_2162 YPK_2162 2399696 2400901 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2050 transporter%2C major facilitator family gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2162 YPK_2163 YPK_2163 YPK_2163 2401326 2401889 + protein of unknown function DUF1439 PFAM: protein of unknown function DUF1439~KEGG: ypi:YpsIP31758_2051 putative lipoprotein gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2163 YPK_2164 YPK_2164 YPK_2164 2402343 2402903 - cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein~KEGG: ypi:YpsIP31758_2052 cytoplasmic chaperone%2C TorD family gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2164 YPK_2165 YPK_2165 YPK_2165 2402940 2403677 - PHP domain protein PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~KEGG: ypi:YpsIP31758_2053 putative phosphoesterase gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2165 YPK_2166 YPK_2166 YPK_2166 2404312 2405424 - ROK family protein PFAM: ROK family protein~KEGG: ypi:YpsIP31758_2054 ROK family protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2166 YPK_2167 YPK_2167 YPK_2167 2405438 2406268 - glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: ypi:YpsIP31758_2055 glycerophosphoryl diester phosphodiesterase family gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2167 YPK_2168 YPK_2168 YPK_2168 2406482 2407549 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2056 putative spermidine/putrescine ABC transporter%2C ATP-binding protein gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2168 YPK_2169 YPK_2169 YPK_2169 2407546 2408412 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: yps:YPTB2015 putative ABC transporter%2C permease subunit gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2169 YPK_2170 YPK_2170 YPK_2170 2408409 2409245 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2058 putative spermidine/putrescine ABC transporter%2C permease protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2170 YPK_2171 YPK_2171 YPK_2171 2409265 2410347 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: yps:YPTB2013 possible ABC transporter%2C periplasmic substrate binding protein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2171 YPK_2172 YPK_2172 YPK_2172 2410648 2411523 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: ypi:YpsIP31758_2060 glycerophosphoryl diester phosphodiesterase family protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2172 YPK_2174 YPK_2174 YPK_2174 2412618 2414315 + sulfate transporter TIGRFAM: sulfate transporter~PFAM: Sulfate transporter/antisigma-factor antagonist STAS%3B Xanthine/uracil/vitamin C permease%3B sulphate transporter~KEGG: ypm:YP_1870 sulfate transporter gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2174 YPK_2175 YPK_2175 YPK_2175 2414668 2415522 - 2-dehydro-3-deoxyphosphooctonate aldolase TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase~PFAM: DAHP synthetase I/KDSA~KEGG: ypi:YpsIP31758_2062 3-deoxy-8-phosphooctulonate synthase gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2175 YPK_2176 YPK_2176 YPK_2176 2415618 2416427 - SirB1 protein KEGG: ypi:YpsIP31758_2063 SirB1 protein gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2176 YPK_2177 YPK_2177 YPK_2177 2416424 2416825 - Invasion gene expression up-regulator SirB PFAM: Invasion gene expression up-regulator SirB~KEGG: ypm:YP_1867 hypothetical protein gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2177 YPK_2178 YPK_2178 YPK_2178 2416889 2417719 - protein-(glutamine-N5) methyltransferase%2C release factor-specific TIGRFAM: modification methylase%2C HemK family%3B protein-(glutamine-N5) methyltransferase%2C release factor-specific~PFAM: methyltransferase small%3B Methyltransferase type 11~KEGG: yps:YPTB2006 putative protoporphyrinogen oxidase gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2178 YPK_2179 YPK_2179 YPK_2179 2417719 2418801 - peptide chain release factor 1 TIGRFAM: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: ypi:YpsIP31758_2066 peptide chain release factor 1 gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2179 YPK_2180 YPK_2180 YPK_2180 2418834 2420150 - glutamyl-tRNA reductase KEGG: ypk:y2291 glutamyl-tRNA reductase~TIGRFAM: glutamyl-tRNA reductase~PFAM: Shikimate/quinate 5-dehydrogenase%3B Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2180 YPK_2181 YPK_2181 YPK_2181 2420402 2421025 + outer membrane lipoprotein LolB PFAM: outer membrane lipoprotein LolB~KEGG: yps:YPTB2003 putative lipoprotein gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2181 YPK_2182 YPK_2182 YPK_2182 2421027 2421959 + 4-diphosphocytidyl-2C-methyl-D-erythritol kinase KEGG: ypm:YP_1862 putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2182 YPK_2183 YPK_2183 YPK_2183 2422081 2422209 + hypothetical protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2183 YPK_2184 YPK_2184 YPK_2184 2422269 2423216 + ribose-phosphate pyrophosphokinase KEGG: ypm:YP_1861 phosphoribosylpyrophosphate synthetase~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2184 YPK_2185 YPK_2185 YPK_2185 2423418 2423690 - conserved hypothetical protein KEGG: ypm:YP_1860 hypothetical protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2185 YPK_2186 YPK_2186 YPK_2186 2424022 2424642 + Aminoacyl-tRNA hydrolase PFAM: peptidyl-tRNA hydrolase~KEGG: ypm:YP_1859 peptidyl-tRNA hydrolase gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2186 YPK_2187 YPK_2187 YPK_2187 2424807 2425898 + GTP-binding protein YchF TIGRFAM: GTP-binding protein YchF~PFAM: GTP-binding protein HSR1-related%3B Protein of unknown function DUF933~KEGG: ypm:YP_1858 predicted GTPase gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2187 YPK_2188 YPK_2188 YPK_2188 2426005 2426847 + conserved hypothetical protein KEGG: yps:YPTB1997 hypothetical protein gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2188 YPK_2189 YPK_2189 YPK_2189 2427054 2427749 - conserved hypothetical protein KEGG: yps:YPTB1996 hypothetical protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2189 YPK_2190 YPK_2190 YPK_2190 2427764 2428429 - flavodoxin KEGG: yps:YPTB1995 flavodoxin gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2190 YPK_2191 YPK_2191 YPK_2191 2428620 2429711 - hydrolases of the alpha/beta superfamily KEGG: ypm:YP_1849 hydrolases of the alpha/beta superfamily gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2191 YPK_2192 YPK_2192 YPK_2192 2429976 2430668 + two component heavy metal response transcriptional regulator%2C winged helix family TIGRFAM: heavy metal response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_1848 transcriptional activator gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2192 YPK_2193 YPK_2193 YPK_2193 2430680 2432065 + heavy metal sensor signal transduction histidine kinase TIGRFAM: heavy metal sensor kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypm:YP_1847 putative two-component system sensor protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2193 YPK_2194 YPK_2194 YPK_2194 2432342 2432764 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: ypm:YP_1846 putative decarboxylase gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2194 YPK_2195 YPK_2195 YPK_2195 2432819 2433289 + Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: ypm:YP_1845 hypothetical protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2195 YPK_2196 YPK_2196 YPK_2196 2433502 2434575 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2089 hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2196 YPK_2197 YPK_2197 YPK_2197 2435355 2436260 + conserved hypothetical protein KEGG: yps:YPTB1988 hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2197 YPK_2198 YPK_2198 YPK_2198 2436266 2437198 + conserved hypothetical protein KEGG: ypm:YP_1842 hypothetical protein gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2198 YPK_2199 YPK_2199 YPK_2199 2437185 2438135 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2092 hypothetical protein gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2199 YPK_2200 YPK_2200 YPK_2200 2438181 2438324 + hypothetical protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2200 YPK_2201 YPK_2201 YPK_2201 2438476 2439155 + putative dehydrogenase pseudogene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2201 YPK_2203 YPK_2203 YPK_2203 2439260 2439919 + Methyltransferase type 12 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypi:YpsIP31758_2094 hypothetical protein gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2203 YPK_2204 YPK_2204 YPK_2204 2440054 2440692 - Ribose/galactose isomerase PFAM: Ribose/galactose isomerase~KEGG: ypi:YpsIP31758_2095 hypothetical protein gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2204 YPK_2205 YPK_2205 YPK_2205 2440939 2443050 - Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein~KEGG: yps:YPTB1982 hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2205 YPK_2206 YPK_2206 YPK_2206 2443255 2443413 - hypothetical protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2206 YPK_2207 YPK_2207 YPK_2207 2443628 2445790 + Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein%3B MORN variant repeat protein~KEGG: yps:YPTB1981 hypothetical protein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2207 YPK_2208 YPK_2208 YPK_2208 2445854 2447572 + conserved hypothetical protein KEGG: yps:YPTB1980 hypothetical protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2208 YPK_2209 YPK_2209 YPK_2209 2447742 2448206 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2099 hypothetical protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2209 YPK_2210 YPK_2210 YPK_2210 2448367 2449554 - UDP-glycosyltransferase family protein KEGG: ypi:YpsIP31758_2100 UDP-glycosyltransferase family protein gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2210 YPK_2211 YPK_2211 YPK_2211 2449551 2450135 - conserved hypothetical protein KEGG: yps:YPTB1977 hypothetical protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2211 YPK_2212 YPK_2212 YPK_2212 2450132 2451286 - putative glycosyl transferase KEGG: yps:YPTB1976 putative glycosyl transferase gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2212 YPK_2213 YPK_2213 YPK_2213 2451286 2452248 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: ypi:YpsIP31758_2103 NAD dependent epimerase/dehydratase family protein gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2213 YPK_2214 YPK_2214 YPK_2214 2452382 2453668 - adenylate-forming enzyme TIGRFAM: adenylate-forming enzyme~KEGG: ypm:YP_1830 putative coenzyme synthetase gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2214 YPK_2215 YPK_2215 YPK_2215 2453665 2454471 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: ypm:YP_1829 Zn-dependent hydrolase%2C including glyoxylases gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2215 YPK_2216 YPK_2216 YPK_2216 2454464 2455480 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: ypi:YpsIP31758_2107 NAD-dependent epimerase/dehydratase family protein gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2216 YPK_2217 YPK_2217 YPK_2217 2455494 2456501 - Beta-ketoacyl-acyl-carrier-protein synthase I PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~KEGG: ypi:YpsIP31758_2108 hypothetical protein gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2217 YPK_2218 YPK_2218 YPK_2218 2457139 2459124 + Chorismate binding-like protein PFAM: Chorismate binding-like~KEGG: ypk:y2336 hypothetical protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2218 YPK_2219 YPK_2219 YPK_2219 2459302 2459874 - protein of unknown function DUF886 PFAM: protein of unknown function DUF886~KEGG: ypi:YpsIP31758_2110 putative cold inducible protein Ves gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2219 YPK_2220 YPK_2220 YPK_2220 2459874 2461244 - formiminoglutamate deiminase TIGRFAM: formiminoglutamate deiminase~PFAM: amidohydrolase~KEGG: ypm:YP_1824 atrazine chlorohydrolase gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2220 YPK_2221 YPK_2221 YPK_2221 2461392 2462159 + transcriptional regulator%2C histidine utilization repressor%2C GntR family TIGRFAM: histidine utilization repressor~PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain protein~KEGG: yps:YPTB1967 putative GntR-family transcriptional regulatory protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2221 YPK_2222 YPK_2222 YPK_2222 2462363 2463583 + imidazolonepropionase KEGG: ypi:YpsIP31758_2113 imidazolonepropionase~TIGRFAM: imidazolonepropionase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2222 YPK_2223 YPK_2223 YPK_2223 2463580 2464386 + N-formylglutamate amidohydrolase PFAM: N-formylglutamate amidohydrolase~KEGG: ypi:YpsIP31758_2114 N-formylglutamate amidohydrolase gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2223 YPK_2224 YPK_2224 YPK_2224 2464981 2466063 - porin Gram-negative type PFAM: porin Gram-negative type~KEGG: ypi:YpsIP31758_2115 outer membrane protein N gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2224 YPK_2225 YPK_2225 YPK_2225 2466821 2467813 - succinylglutamate desuccinylase TIGRFAM: succinylglutamate desuccinylase~PFAM: Succinylglutamate desuccinylase/aspartoacylase~KEGG: ypi:YpsIP31758_2117 succinylglutamate desuccinylase gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2225 YPK_2226 YPK_2226 YPK_2226 2467874 2469217 - succinylarginine dihydrolase TIGRFAM: succinylarginine dihydrolase~PFAM: Succinylarginine dihydrolase~KEGG: yps:YPTB1962 succinylarginine dihydrolase gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2226 YPK_2227 YPK_2227 YPK_2227 2469241 2470758 - succinylglutamic semialdehyde dehydrogenase TIGRFAM: succinylglutamic semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase_~KEGG: ypm:YP_1709 succinylglutamic semialdehyde dehydrogenase gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2227 YPK_2228 YPK_2228 YPK_2228 2470755 2471807 - arginine N-succinyltransferase KEGG: yps:YPTB1960 arginine N-succinyltransferase~TIGRFAM: arginine/ornithine succinyltransferase subunit%3B arginine N-succinyltransferase~PFAM: arginine N-succinyltransferase beta subunit gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2228 YPK_2229 YPK_2229 YPK_2229 2471837 2473177 - succinylornithine transaminase family TIGRFAM: acetylornithine and succinylornithine aminotransferase%3B succinylornithine transaminase family~PFAM: aminotransferase class-III~KEGG: ypm:YP_1707 acetylornithine delta-aminotransferase gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2229 YPK_2230 YPK_2230 YPK_2230 2473559 2473684 - hypothetical protein gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2230 YPK_2231 YPK_2231 YPK_2231 2473700 2475001 - putative transcriptional regulator%2C GntR family PFAM: aminotransferase class I and II~KEGG: ypm:YP_1705 putative GntR-family regulatory protein gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2231 YPK_2232 YPK_2232 YPK_2232 2475431 2477212 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase dimerisation and phosphoacceptor region~KEGG: ypi:YpsIP31758_2123 nitrate/nitrite sensor protein NarX gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2232 YPK_2233 YPK_2233 YPK_2233 2477779 2478879 + calcium/proton exchanger TIGRFAM: calcium/proton exchanger~PFAM: sodium/calcium exchanger membrane region~KEGG: ypm:YP_1703 calcium/proton antiporter gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2233 YPK_2234 YPK_2234 YPK_2234 2479074 2479532 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2234 YPK_2235 YPK_2235 YPK_2235 2479711 2480499 - PhoH family protein PFAM: PhoH family protein~KEGG: ypi:YpsIP31758_2125 putative PhoH protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2235 YPK_2236 YPK_2236 YPK_2236 2480559 2480837 - conserved hypothetical protein KEGG: yps:YPTB1954 hypothetical protein gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2236 YPK_2237 YPK_2237 YPK_2237 2481276 2482175 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypm:YP_1699 putative acetyltransferase gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2237 YPK_2238 YPK_2238 YPK_2238 2482471 2482938 - haemin storage system%2C HmsS protein KEGG: ypm:YP_1698 haemin storage system%2C HmsS protein gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2238 YPK_2239 YPK_2239 YPK_2239 2482935 2484269 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ypm:YP_1697 glycosyltransferase%2C probably involved in cell wall biogenesis gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2239 YPK_2240 YPK_2240 YPK_2240 2484259 2486280 - polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: ypm:YP_1696 haemin storage system%2C HmsF protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2240 YPK_2241 YPK_2241 YPK_2241 2486293 2488767 - Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein~KEGG: ypp:YPDSF_1171 haemin storage system%2C HmsH protein gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2241 YPK_2242 YPK_2242 YPK_2242 2489436 2490653 - peptidase M24 PFAM: creatinase%3B peptidase M24~KEGG: ypi:YpsIP31758_2132 peptidase%2C M24 family gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2242 YPK_2243 YPK_2243 YPK_2243 2490794 2491681 - tellurite resistance protein TehB TIGRFAM: tellurite resistance protein TehB~PFAM: Methyltransferase type 11%3B Methyltransferase type 12%3B Protein of unknown function DUF1971%3B Tellurite resistance methyltransferase%2C TehB%2C core~KEGG: ypi:YpsIP31758_2133 tellurite resistance protein TehB gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2243 YPK_2244 YPK_2244 YPK_2244 2491854 2492168 - cytochrome c class I PFAM: cytochrome c class I~KEGG: ypm:YP_1692 putative cytochrome precursor gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2244 YPK_2245 YPK_2245 YPK_2245 2492165 2492662 - Redoxin domain protein PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: ypm:YP_1691 putative thioredoxin-family protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2245 YPK_2246 YPK_2246 YPK_2246 2492652 2493365 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_1690 ABC transporter%2C ATP-binding protein gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2246 YPK_2247 YPK_2247 YPK_2247 2493369 2494550 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: yps:YPTB1943 putative ABC transporter%2C permease subunit gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2247 YPK_2248 YPK_2248 YPK_2248 2494540 2495832 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: ypm:YP_1688 putative membrane protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2248 YPK_2249 YPK_2249 YPK_2249 2495835 2497244 - YHS domain protein PFAM: YHS domain protein~KEGG: ypm:YP_1687 hypothetical protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2249 YPK_2250 YPK_2250 YPK_2250 2497267 2497404 - hypothetical protein gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2250 YPK_2251 YPK_2251 YPK_2251 2497529 2498056 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2140 hypothetical protein gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2251 YPK_2252 YPK_2252 YPK_2252 2498260 2500179 - iron permease FTR1 PFAM: iron permease FTR1~KEGG: yps:YPTB1939 high-affinity Fe2+/Pb2+ permease gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2252 YPK_2253 YPK_2253 YPK_2253 2500779 2502419 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_1683 hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2253 YPK_2254 YPK_2254 YPK_2254 2502530 2503537 - Glutaminase PFAM: Glutaminase%2C core~KEGG: ypm:YP_1682 putative glutaminase gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2254 YPK_2255 YPK_2255 YPK_2255 2504748 2505518 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~KEGG: ypm:YP_1680 probable DeoR-family transcriptional regulatory protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2255 YPK_2256 YPK_2256 YPK_2256 2506283 2507812 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypm:YP_1679 L-asparagine permease gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2256 YPK_2257 YPK_2257 YPK_2257 2508008 2509192 - putative transcriptional regulator%2C GntR family PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_2148 aminotransferase%2C class I and II gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2257 YPK_2258 YPK_2258 YPK_2258 2509544 2510143 + NADH:ubiquinone oxidoreductase%2C subunit E TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit E~PFAM: RnfA-Nqr electron transport subunit~KEGG: ypm:YP_1677 putative oxidoreductase gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2258 YPK_2259 YPK_2259 YPK_2259 2510448 2511392 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_1676 putative LysR-family transcriptional regulatory protein gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2259 YPK_2260 YPK_2260 YPK_2260 2511504 2512373 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: yps:YPTB1931 putative dicarboxylic acid hydrolase gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2260 YPK_2261 YPK_2261 YPK_2261 2512439 2513668 + transporter%2C major facilitator family pseudogene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2261 YPK_2263 YPK_2263 YPK_2263 2513888 2514448 + conserved hypothetical protein KEGG: ypm:YP_1673 hypothetical protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2263 YPK_2264 YPK_2264 YPK_2264 2514473 2514946 + putative lipoprotein KEGG: ypm:YP_1672 putative lipoprotein gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2264 YPK_2265 YPK_2265 YPK_2265 2515021 2515899 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_2155 substrate-binding transcriptional regulator%2C LysR family gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2265 YPK_2266 YPK_2266 YPK_2266 2515994 2516836 + HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase~KEGG: ypi:YpsIP31758_2156 HpcH/HpaI aldolase/citrate lyase family protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2266 YPK_2267 YPK_2267 YPK_2267 2516778 2517428 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: ypm:YP_1669 putative transcriptional regulator gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2267 YPK_2268 YPK_2268 YPK_2268 2517451 2518773 + acetyl-CoA hydrolase/transferase PFAM: acetyl-CoA hydrolase/transferase~KEGG: ypm:YP_1668 putative 4-hydroxybutyrate coenzyme A transferase gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2268 YPK_2269 YPK_2269 YPK_2269 2519600 2520232 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~KEGG: ypi:YpsIP31758_2160 DNA-binding response regulator%2C LuxR family gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2269 YPK_2270 YPK_2270 YPK_2270 2520207 2524206 + histidine kinase pseudogene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2270 YPK_2272 YPK_2272 YPK_2272 2524588 2525118 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypi:YpsIP31758_2163 fimbrial protein gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2272 YPK_2273 YPK_2273 YPK_2273 2525211 2525942 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: yps:YPTB1920 probable pili assembly chaperone gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2273 YPK_2274 YPK_2274 YPK_2274 2525991 2528582 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: yps:YPTB1919 putative outer membrane fimbrial usher porin gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2274 YPK_2275 YPK_2275 YPK_2275 2528598 2529947 + conserved hypothetical protein KEGG: yps:YPTB1918 hypothetical protein gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2275 YPK_2276 YPK_2276 YPK_2276 2529944 2530684 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: ypi:YpsIP31758_2167 gram-negative pili assembly chaperone gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2276 YPK_2277 YPK_2277 YPK_2277 2531372 2532514 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: yps:YPTB1916 ABC sugar transporter%2C ATP binding subunit gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2277 YPK_2278 YPK_2278 YPK_2278 2532539 2533366 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2170 carbohydrate uptake (CUT1 family) ABC transporter%2C permease protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2278 YPK_2279 YPK_2279 YPK_2279 2533359 2534219 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_1499 putative binding-protein-dependent transport system%2C inner membrane component gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2279 YPK_2280 YPK_2280 YPK_2280 2534286 2535554 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypm:YP_1500 putative exported solute-binding protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2280 YPK_2281 YPK_2281 YPK_2281 2535584 2536597 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: yps:YPTB1912 putative oxidoreductase gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2281 YPK_2282 YPK_2282 YPK_2282 2536599 2536736 - hypothetical protein gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2282 YPK_2283 YPK_2283 YPK_2283 2537011 2537220 + conserved hypothetical protein KEGG: yps:YPTB1911 hypothetical protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2283 YPK_2284 YPK_2284 YPK_2284 2537261 2538058 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain protein~KEGG: ypm:YP_1504 GntR-family putative transcriptional regulatory protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2284 YPK_2285 YPK_2285 YPK_2285 2538075 2538236 + conserved hypothetical protein KEGG: ypp:YPDSF_1237 hypothetical protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2285 YPK_2286 YPK_2286 YPK_2286 2538245 2538349 - putative transposase KEGG: ype:YPO1889 putative transposase (partial) gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2286 YPK_2287 YPK_2287 YPK_2287 2538403 2538609 - conserved hypothetical protein KEGG: ypp:YPDSF_1239 hypothetical protein gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2287 YPK_2288 YPK_2288 YPK_2288 2539027 2539461 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2195 hypothetical protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2288 YPK_2289 YPK_2289 YPK_2289 2539473 2540042 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2178 hypothetical protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2289 YPK_2290 YPK_2290 YPK_2290 2540230 2540403 + hypothetical protein gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2290 YPK_2291 YPK_2291 YPK_2291 2540460 2540798 - transposase KEGG: ypp:YPDSF_1242 transposase gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2291 YPK_2292 YPK_2292 YPK_2292 2540798 2541658 - transposase mutator type PFAM: transposase mutator type~KEGG: ypp:YPDSF_1243 hypothetical protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2292 YPK_2293 YPK_2293 YPK_2293 2541706 2542782 - conserved hypothetical protein KEGG: ypk:y2426 hypothetical protein gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2293 YPK_2294 YPK_2294 YPK_2294 2542848 2543138 - conserved hypothetical protein KEGG: ypm:YP_1509 hypothetical protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2294 YPK_2295 YPK_2295 YPK_2295 2543140 2543391 - protein of unknown function DUF497 PFAM: protein of unknown function DUF497~KEGG: ypm:YP_1510 hypothetical protein gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2295 YPK_2296 YPK_2296 YPK_2296 2543422 2543781 + baseplate assembly protein V PFAM: baseplate assembly protein V~KEGG: ypm:YP_1511 hypothetical protein gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2296 YPK_2297 YPK_2297 YPK_2297 2543778 2544077 + GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: ypm:YP_1512 hypothetical protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2297 YPK_2298 YPK_2298 YPK_2298 2544818 2545336 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2186 hypothetical protein gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2298 YPK_2299 YPK_2299 YPK_2299 2545317 2545595 + conserved hypothetical protein KEGG: ypm:YP_1516 hypothetical protein gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2299 YPK_2300 YPK_2300 YPK_2300 2545760 2546929 + tail sheath protein PFAM: tail sheath protein~KEGG: ypi:YpsIP31758_2187 tail sheath protein gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2300 YPK_2301 YPK_2301 YPK_2301 2546941 2547456 + phage major tail tube protein TIGRFAM: phage major tail tube protein~PFAM: major tail tube protein~KEGG: ypi:YpsIP31758_2188 tail tube protein gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2301 YPK_2302 YPK_2302 YPK_2302 2547510 2547857 + tail E family protein PFAM: tail E family protein~KEGG: ypi:YpsIP31758_2189 tail protein gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2302 YPK_2303 YPK_2303 YPK_2303 2547984 2550899 + phage tail tape measure protein%2C TP901 family TIGRFAM: phage tail tape measure protein%2C TP901 family~KEGG: yps:YPTB1837 putative tail fiber component T of bacteriophage P2 gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2303 YPK_2304 YPK_2304 YPK_2304 2550911 2551375 + P2 GpU family protein PFAM: P2 GpU family protein~KEGG: yps:YPTB1836 putative bacteriophage P2 tail protein gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2304 YPK_2305 YPK_2305 YPK_2305 2551372 2552466 + late control D family protein PFAM: late control D family protein~KEGG: yps:YPTB1835 bacteriophage P2 gpD protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2305 YPK_2306 YPK_2306 YPK_2306 2552541 2552756 + transcriptional activator Ogr/delta PFAM: transcriptional activator Ogr/delta~KEGG: ypi:YpsIP31758_2194 phage transcriptional activator%2C Ogr/delta gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2306 YPK_2307 YPK_2307 YPK_2307 2553107 2554114 - integrase family protein PFAM: integrase family protein~KEGG: ecs:ECs2617 putative integrase gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2307 YPK_2308 YPK_2308 YPK_2308 2554122 2554634 - hypothetical protein gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2308 YPK_2309 YPK_2309 YPK_2309 2554696 2555334 - conserved hypothetical protein KEGG: ecs:ECs2619 hypothetical protein gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2309 YPK_2310 YPK_2310 YPK_2310 2555352 2555744 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: ecs:ECs2620 putative transcriptional regulator gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2310 YPK_2311 YPK_2311 YPK_2311 2555823 2556014 + conserved hypothetical protein KEGG: ecs:ECs5465 hypothetical protein gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2311 YPK_2312 YPK_2312 YPK_2312 2556027 2556230 + putative DNA-binding protein KEGG: yps:YPTB1869 putative DNA-binding protein gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2312 YPK_2313 YPK_2313 YPK_2313 2556242 2556448 + conserved hypothetical phage-related protein KEGG: yen:YE0856 hypothetical phage-related protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2313 YPK_2314 YPK_2314 YPK_2314 2556445 2556759 + conserved hypothetical protein KEGG: yps:YPTB1868 hypothetical protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2314 YPK_2315 YPK_2315 YPK_2315 2556744 2556890 + hypothetical protein gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2315 YPK_2316 YPK_2316 YPK_2316 2556901 2557161 + conserved hypothetical protein KEGG: yps:YPTB1867 hypothetical protein gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2316 YPK_2317 YPK_2317 YPK_2317 2557192 2557497 + conserved hypothetical protein KEGG: yps:YPTB1866 hypothetical protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2317 YPK_2318 YPK_2318 YPK_2318 2557580 2558341 + conserved hypothetical protein KEGG: yps:YPTB1865 hypothetical protein gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2318 YPK_2319 YPK_2319 YPK_2319 2558398 2559051 + Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: yps:YPTB1864 similar to Orf81 bacteriophage 186 gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2319 YPK_2320 YPK_2320 YPK_2320 2559048 2559866 + DNA adenine methylase KEGG: yps:YPTB1863 putative DNA adenine methylase~TIGRFAM: DNA adenine methylase~PFAM: D12 class N6 adenine-specific DNA methyltransferase gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2320 YPK_2321 YPK_2321 YPK_2321 2559863 2560726 + C-5 cytosine-specific DNA methylase PFAM: C-5 cytosine-specific DNA methylase~KEGG: sgl:SG0727 phage methyltransferase gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2321 YPK_2322 YPK_2322 YPK_2322 2560723 2563278 + replication gene A PFAM: replication gene A~KEGG: yps:YPTB1862 putative phage replication protein gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2322 YPK_2323 YPK_2323 YPK_2323 2563259 2563489 + conserved hypothetical phage-related protein KEGG: yen:YE0862 hypothetical phage-related protein gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2323 YPK_2324 YPK_2324 YPK_2324 2563486 2563830 + putative bacteriophage protein GP46 KEGG: yps:YPTB1861 putative bacteriophage protein GP46 gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2324 YPK_2325 YPK_2325 YPK_2325 2564513 2565544 - phage portal protein%2C PBSX family TIGRFAM: phage portal protein%2C PBSX family~PFAM: portal protein~KEGG: yps:YPTB1860 similar to capsid portal protein bacteriophage 186 gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2325 YPK_2326 YPK_2326 YPK_2326 2565541 2566266 - putative W protein (Enterobacteria phage 186) KEGG: yps:YPTB1763 putative W protein [Enterobacteria phage 186] gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2326 YPK_2327 YPK_2327 YPK_2327 2566266 2568029 - protein of unknown function DUF264 PFAM: protein of unknown function DUF264%3B putative terminase ATPase subunit~KEGG: yps:YPTB1859 similar to gpP phage P2 terminase gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2327 YPK_2328 YPK_2328 YPK_2328 2568200 2569015 + capsid scaffolding PFAM: capsid scaffolding~KEGG: yps:YPTB1858 similar to V protein phage 186 gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2328 YPK_2329 YPK_2329 YPK_2329 2569052 2570107 + phage major capsid protein%2C P2 family TIGRFAM: phage major capsid protein%2C P2 family~PFAM: major capsid protein P2~KEGG: yps:YPTB1857 putative major capsid protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2329 YPK_2330 YPK_2330 YPK_2330 2570114 2570767 + small terminase subunit PFAM: small terminase subunit~KEGG: yps:YPTB1856 putative R protein bacteriophage 186 gb|AAC34151.1| gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2330 YPK_2331 YPK_2331 YPK_2331 2571001 2571492 + head completion protein PFAM: head completion protein~KEGG: yps:YPTB1855 putative orf4 of phage P2 (gene L) gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2331 YPK_2332 YPK_2332 YPK_2332 2571492 2571695 + tail X family protein PFAM: tail X family protein~KEGG: yps:YPTB1854 putative WPhiphage-related tail protein gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2332 YPK_2333 YPK_2333 YPK_2333 2571725 2572111 + conserved hypothetical protein KEGG: yps:YPTB1853 hypothetical protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2333 YPK_2334 YPK_2334 YPK_2334 2572098 2572493 + bacteriophage P7 related protein KEGG: yps:YPTB1852 bacteriophage P7 related protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2334 YPK_2335 YPK_2335 YPK_2335 2572498 2572920 + putative LysB-like protein KEGG: yps:YPTB1851 putative (AB008550) orf12%3B similar to LysB gene of P2:l... gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2335 YPK_2336 YPK_2336 YPK_2336 2573019 2573486 + P2 phage tail completion R family protein PFAM: P2 phage tail completion R family protein~KEGG: yps:YPTB1850 gpR [Enterobacteria phage P2] gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2336 YPK_2337 YPK_2337 YPK_2337 2573483 2573929 + phage virion morphogenesis protein TIGRFAM: phage virion morphogenesis protein~PFAM: virion morphogenesis (putative tail completion) protein~KEGG: yps:YPTB1849 putative O protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2337 YPK_2338 YPK_2338 YPK_2338 2573948 2574178 - hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2338 YPK_2339 YPK_2339 YPK_2339 2574261 2574962 + conserved hypothetical protein KEGG: yps:YPTB1848 hypothetical protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2339 YPK_2340 YPK_2340 YPK_2340 2575050 2575172 - hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2340 YPK_2341 YPK_2341 YPK_2341 2575293 2575928 + phage baseplate assembly protein V TIGRFAM: phage baseplate assembly protein V~PFAM: baseplate assembly protein V~KEGG: yps:YPTB1847 Orf32%3B P2 V homolog%3B baseplate protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2341 YPK_2342 YPK_2342 YPK_2342 2575925 2576278 + GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: yps:YPTB1846 putative phage-related protein gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2342 YPK_2343 YPK_2343 YPK_2343 2576281 2577189 + Baseplate J family protein PFAM: Baseplate J family protein~KEGG: yps:YPTB1845 putative bacteriophage P2 related protein gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2343 YPK_2344 YPK_2344 YPK_2344 2577182 2577790 + phage tail protein I TIGRFAM: phage tail protein I~PFAM: tail protein I~KEGG: yps:YPTB1844 putative bacteriophage P2 protein gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2344 YPK_2345 YPK_2345 YPK_2345 2577787 2579226 + bacteriophage hypothetical protein KEGG: yps:YPTB1843 bacteriophage hypothetical protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2345 YPK_2346 YPK_2346 YPK_2346 2579237 2579716 + conserved hypothetical protein KEGG: yps:YPTB1842 hypothetical protein gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2346 YPK_2347 YPK_2347 YPK_2347 2579850 2581025 + tail sheath protein PFAM: tail sheath protein~KEGG: yps:YPTB1841 putative bacteriophage P2 tail sheath protein gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2347 YPK_2348 YPK_2348 YPK_2348 2581037 2581552 + phage major tail tube protein TIGRFAM: phage major tail tube protein~PFAM: major tail tube protein~KEGG: ypi:YpsIP31758_2188 tail tube protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2348 YPK_2349 YPK_2349 YPK_2349 2581606 2581953 + tail E family protein PFAM: tail E family protein~KEGG: ypi:YpsIP31758_2189 tail protein gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2349 YPK_2350 YPK_2350 YPK_2350 2582080 2584995 + phage tail tape measure protein%2C TP901 family TIGRFAM: phage tail tape measure protein%2C TP901 family~KEGG: yps:YPTB1837 putative tail fiber component T of bacteriophage P2 gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2350 YPK_2351 YPK_2351 YPK_2351 2585007 2585471 + P2 GpU family protein PFAM: P2 GpU family protein~KEGG: yps:YPTB1836 putative bacteriophage P2 tail protein gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2351 YPK_2352 YPK_2352 YPK_2352 2585468 2586562 + late control D family protein PFAM: late control D family protein~KEGG: yps:YPTB1835 bacteriophage P2 gpD protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2352 YPK_2353 YPK_2353 YPK_2353 2586637 2586852 + transcriptional activator Ogr/delta PFAM: transcriptional activator Ogr/delta~KEGG: ypi:YpsIP31758_2194 phage transcriptional activator%2C Ogr/delta gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2353 YPK_2354 YPK_2354 YPK_2354 2587516 2588064 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase KEGG: ypm:YP_1526 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2354 YPK_2355 YPK_2355 YPK_2355 2588123 2589976 - excinuclease ABC%2C C subunit KEGG: ypp:YPDSF_1260 excinuclease ABC subunit C~TIGRFAM: excinuclease ABC%2C C subunit~PFAM: Excinuclease ABC C subunit domain protein%3B helix-hairpin-helix motif%3B excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~SMART: Helix-hairpin-helix DNA-binding class 1 gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2355 YPK_2356 YPK_2356 YPK_2356 2589948 2590604 - two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~KEGG: ypm:YP_1528 response regulator protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2356 YPK_2357 YPK_2357 YPK_2357 2591267 2591491 + conserved hypothetical protein KEGG: ypm:YP_1529 hypothetical protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2357 YPK_2358 YPK_2358 YPK_2358 2591619 2591960 + GlpM family protein PFAM: GlpM family protein~KEGG: ypm:YP_1530 uncharacterized membrane protein required for alginate biosynthesis gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2358 YPK_2359 YPK_2359 YPK_2359 2591988 2592242 - conserved hypothetical protein KEGG: ypm:YP_1531 hypothetical protein gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2359 YPK_2360 YPK_2360 YPK_2360 2592582 2593133 - virulence-related outer membrane protein PFAM: virulence-related outer membrane protein~KEGG: ypp:YPDSF_1265 attachment invasion locus protein gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2360 YPK_2361 YPK_2361 YPK_2361 2594248 2595672 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: yps:YPTB1730 D-serine/D-alanine/glycine transporter%2C APC family gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2361 YPK_2362 YPK_2362 YPK_2362 2595798 2596976 - Kelch repeat-containing protein PFAM: Kelch repeat-containing protein%3B Kelch repeat protein~KEGG: ypm:YP_1535 hypothetical protein gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2362 YPK_2363 YPK_2363 YPK_2363 2597370 2597969 + flavoprotein WrbA TIGRFAM: flavoprotein WrbA~PFAM: NADPH-dependent FMN reductase%3B flavodoxin/nitric oxide synthase~KEGG: ypm:YP_1536 trp repressor binding protein gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2363 YPK_2364 YPK_2364 YPK_2364 2598055 2599359 - Dyp-type peroxidase family TIGRFAM: Dyp-type peroxidase family~PFAM: Dyp-type peroxidase~KEGG: yps:YPTB1727 putative iron-dependent peroxidase gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2364 YPK_2365 YPK_2365 YPK_2365 2599370 2600500 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2263 hypothetical protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2365 YPK_2366 YPK_2366 YPK_2366 2600530 2601378 - iron permease FTR1 PFAM: iron permease FTR1~KEGG: ypm:YP_1539 putative membrane protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2366 YPK_2367 YPK_2367 YPK_2367 2601729 2603213 - sodium/proline symporter TIGRFAM: SSS sodium solute transporter superfamily%3B sodium/proline symporter~PFAM: Na+/solute symporter~KEGG: ypm:YP_1540 proline permease gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2367 YPK_2368 YPK_2368 YPK_2368 2603243 2603440 - conserved hypothetical protein KEGG: ypm:YP_1541 hypothetical protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2368 YPK_2369 YPK_2369 YPK_2369 2603785 2607756 + delta-1-pyrroline-5-carboxylate dehydrogenase TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase~PFAM: Proline dehydrogenase%3B Aldehyde Dehydrogenase_~KEGG: ypk:y2455 proline dehydrogenase%2C P5C dehydrogenase gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2369 YPK_2370 YPK_2370 YPK_2370 2608002 2608133 - hypothetical protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2370 YPK_2371 YPK_2371 YPK_2371 2608294 2608587 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2269 hypothetical protein gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2371 YPK_2372 YPK_2372 YPK_2372 2608587 2608958 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2270 hypothetical protein gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2372 YPK_2373 YPK_2373 YPK_2373 2609059 2609160 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2271 hypothetical protein gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2373 YPK_2374 YPK_2374 YPK_2374 2609250 2610011 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_1545 putative amino-acid ABC transporter (ATP-binding protein) gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2374 YPK_2375 YPK_2375 YPK_2375 2610014 2610676 - polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2273 amino acid ABC transporter%2C permease protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2375 YPK_2376 YPK_2376 YPK_2376 2610676 2611476 - extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: ionotropic glutamate receptor~KEGG: ypm:YP_1547 putative cystine-binding periplasmic protein gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2376 YPK_2377 YPK_2377 YPK_2377 2611600 2612619 - pyridoxal phosphate-dependent enzyme%2C D-cysteine desulfhydrase family TIGRFAM: pyridoxal phosphate-dependent enzymes%2C D-cysteine desulfhydrase family~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypk:y2462 putative 1-aminocyclopropane-1-carboxylate deaminase gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2377 YPK_2378 YPK_2378 YPK_2378 2612881 2613390 - integrase domain protein SAM domain protein PFAM: integrase domain protein SAM domain protein~KEGG: ypi:YpsIP31758_2278 protein FliZ gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2378 YPK_2379 YPK_2379 YPK_2379 2613390 2613542 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2279 hypothetical protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2379 YPK_2380 YPK_2380 YPK_2380 2613625 2614347 - RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG KEGG: ypi:YpsIP31758_2280 RNA polymerase sigma factor for flagellar operon~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein%3B Sigma-70 region 4 type 2 gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2380 YPK_2381 YPK_2381 YPK_2381 2614694 2615803 - flagellin domain protein PFAM: flagellin domain protein~KEGG: ypk:y2465 putative flagellin gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2381 YPK_2382 YPK_2382 YPK_2382 2616100 2617500 + flagellar hook-associated 2 domain protein PFAM: flagellar hook-associated protein 2 domain protein%3B flagellar hook-associated 2 domain protein%3B flagellin hook IN repeat protein~KEGG: yps:YPTB1713 flagellar hook-associated protein 2 gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2382 YPK_2383 YPK_2383 YPK_2383 2617511 2617909 + flagellar protein FliS PFAM: flagellar protein FliS~KEGG: ypi:YpsIP31758_2284 flagellar protein FliS gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2383 YPK_2384 YPK_2384 YPK_2384 2617920 2618282 + flagellar export chaperone PFAM: flagellar export chaperone~KEGG: ypi:YpsIP31758_2285 flagellar protein FliT gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2384 YPK_2385 YPK_2385 YPK_2385 2618583 2619458 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: yps:YPTB1710 putative AraC-family transcriptional regulatory protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2385 YPK_2386 YPK_2386 YPK_2386 2619812 2622766 + metal dependent phosphohydrolase PFAM: histidine kinase HAMP region domain protein~SMART: metal-dependent phosphohydrolase HD region~KEGG: ypi:YpsIP31758_2287 HAMP domain protein gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2386 YPK_2387 YPK_2387 YPK_2387 2622927 2623538 + HhH-GPD family protein PFAM: HhH-GPD family protein~KEGG: ypm:YP_1558 putative glycosidase gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2387 YPK_2388 YPK_2388 YPK_2388 2623724 2624200 - death-on-curing family protein TIGRFAM: death-on-curing family protein~PFAM: Death-on-curing protein~KEGG: ypp:YPDSF_1291 hypothetical protein gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2388 YPK_2389 YPK_2389 YPK_2389 2624211 2624390 - conserved hypothetical protein KEGG: ypm:YP_1560 hypothetical protein gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2389 YPK_2390 YPK_2390 YPK_2390 2624826 2625137 - flagellar hook-basal body complex subunit FliE TIGRFAM: flagellar hook-basal body complex subunit FliE~PFAM: flagellar hook-basal body complex protein FliE~KEGG: ypm:YP_1561 flagellar hook-basal body complex protein FliE gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2390 YPK_2391 YPK_2391 YPK_2391 2625490 2627202 + flagellar M-ring protein FliF TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein~KEGG: ypi:YpsIP31758_2290 flagellar M-ring protein FliF gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2391 YPK_2392 YPK_2392 YPK_2392 2627199 2628191 + flagellar motor switch protein FliG PFAM: flagellar motor switch protein FliG~KEGG: ypi:YpsIP31758_2291 flagellar motor switch protein FliG gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2392 YPK_2393 YPK_2393 YPK_2393 2628184 2628900 + flagellar assembly protein FliH PFAM: flagellar assembly protein FliH~KEGG: yps:YPTB1701 flagellar assembly protein FliH gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2393 YPK_2394 YPK_2394 YPK_2394 2628900 2630318 + ATPase%2C FliI/YscN family KEGG: ypi:YpsIP31758_2293 flagellar protein export ATPase FliI~TIGRFAM: ATPase%2C FliI/YscN family%3B flagellar protein export ATPase FliI~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region~SMART: AAA ATPase gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2394 YPK_2395 YPK_2395 YPK_2395 2630394 2630840 + flagellar export protein FliJ TIGRFAM: flagellar export protein FliJ~PFAM: flagellar FliJ protein~KEGG: ypi:YpsIP31758_2294 flagellar export protein FliJ gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2395 YPK_2396 YPK_2396 YPK_2396 2630837 2632189 + flagellar hook-length control protein PFAM: flagellar hook-length control protein~KEGG: ypp:YPDSF_1299 flagellar hook-length control protein FliK gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2396 YPK_2397 YPK_2397 YPK_2397 2632214 2632336 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2296 hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2397 YPK_2398 YPK_2398 YPK_2398 2632456 2632926 + flagellar basal body-associated protein FliL PFAM: flagellar basal body-associated protein FliL~KEGG: ypi:YpsIP31758_2298 flagellar basal body-associated protein FliL gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2398 YPK_2399 YPK_2399 YPK_2399 2632932 2633933 + flagellar motor switch protein FliM PFAM: flagellar motor switch protein FliM~KEGG: ypp:YPDSF_1301 flagellar motor switch protein FliM gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2399 YPK_2400 YPK_2400 YPK_2400 2633930 2634346 + flagellar motor switch protein FliN TIGRFAM: flagellar motor switch protein FliN~PFAM: surface presentation of antigens (SPOA) protein~KEGG: ypi:YpsIP31758_2300 flagellar motor switch protein FliN gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2400 YPK_2401 YPK_2401 YPK_2401 2634346 2634882 + flagellar biosynthesis protein FliO PFAM: flagellar biosynthesis protein FliO~KEGG: ypp:YPDSF_1303 flagellar protein FliO gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2401 YPK_2402 YPK_2402 YPK_2402 2634879 2635703 + flagellar biosynthetic protein FliP KEGG: ypi:YpsIP31758_2302 flagellar biosynthetic protein FliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2402 YPK_2403 YPK_2403 YPK_2403 2635809 2636078 + flagellar biosynthetic protein FliQ TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3~KEGG: ypm:YP_1573 flagellar biosynthetic protein FliQ gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2403 YPK_2404 YPK_2404 YPK_2404 2636081 2636863 + flagellar biosynthetic protein FliR TIGRFAM: flagellar biosynthetic protein FliR~PFAM: type III secretion system inner membrane R protein~KEGG: ypi:YpsIP31758_2304 flagellar biosynthetic protein FliR gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2404 YPK_2405 YPK_2405 YPK_2405 2637159 2637326 + hypothetical protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2405 YPK_2406 YPK_2406 YPK_2406 2637336 2637935 + conserved hypothetical protein KEGG: yps:YPTB1690 hypothetical protein gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2406 YPK_2407 YPK_2407 YPK_2407 2638001 2638960 - PfkB domain protein PFAM: PfkB domain protein~KEGG: ypm:YP_1577 putative sugar kinase gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2407 YPK_2408 YPK_2408 YPK_2408 2639009 2640031 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_2307 carbohydrate uptake ABC transporter 2 (CUT2) family%2C permease protein gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2408 YPK_2409 YPK_2409 YPK_2409 2640034 2641611 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2308 carbohydrate uptake ABC transporter 2 (CUT2) family%2C ATP-binding protein gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2409 YPK_2410 YPK_2410 YPK_2410 2641677 2642672 - putative sugar-binding periplasmic protein KEGG: ypm:YP_1580 putative sugar-binding periplasmic protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2410 YPK_2411 YPK_2411 YPK_2411 2642715 2643794 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypp:YPDSF_1312 sugar transport system permease protein gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2411 YPK_2412 YPK_2412 YPK_2412 2643791 2643946 - hypothetical protein gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2412 YPK_2413 YPK_2413 YPK_2413 2643924 2645990 - short-chain dehydrogenase/reductase SDR PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR~KEGG: ypm:YP_1582 short chain dehydrogenase gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2413 YPK_2414 YPK_2414 YPK_2414 2646208 2647209 + transcriptional regulator%2C DeoR family PFAM: putative sugar-binding domain protein~KEGG: ypi:YpsIP31758_2312 putative sugar-binding domain protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2414 YPK_2415 YPK_2415 YPK_2415 2647238 2648218 - flagellar hook-associated protein 3 TIGRFAM: flagellar hook-associated protein 3~PFAM: flagellin domain protein~KEGG: ypp:YPDSF_1315 flagellar hook-associated protein 3 gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2415 YPK_2416 YPK_2416 YPK_2416 2648357 2650021 - flagellar hook-associated protein FlgK TIGRFAM: flagellar hook-associated protein FlgK~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~KEGG: ypi:YpsIP31758_2314 flagellar hook-associated protein FlgK gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2416 YPK_2417 YPK_2417 YPK_2417 2650320 2651264 - flagellar rod assembly protein/muramidase FlgJ KEGG: ypi:YpsIP31758_2316 flagellar rod assembly protein/muramidase FlgJ~TIGRFAM: flagellar rod assembly protein/muramidase FlgJ~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase~SMART: Lysozyme subfamily 2 gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2417 YPK_2418 YPK_2418 YPK_2418 2651264 2652373 - flagellar P-ring protein PFAM: flagellar P-ring protein~KEGG: ypi:YpsIP31758_2317 flagellar P-ring protein FlgI gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2418 YPK_2419 YPK_2419 YPK_2419 2652388 2653077 - flagellar L-ring protein PFAM: flagellar L-ring protein~KEGG: ypm:YP_1588 basal-body outer-membrane L (lipopolysaccharide layer) ring protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2419 YPK_2420 YPK_2420 YPK_2420 2653221 2654003 - flagellar basal-body rod protein FlgG TIGRFAM: flagellar basal-body rod protein FlgG~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~KEGG: ypi:YpsIP31758_2319 flagellar basal-body rod protein FlgG gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2420 YPK_2421 YPK_2421 YPK_2421 2654029 2654784 - flagellar basal-body rod protein FlgF TIGRFAM: flagellar basal-body rod protein FlgF~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~KEGG: ypi:YpsIP31758_2320 flagellar basal-body rod protein FlgF gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2421 YPK_2422 YPK_2422 YPK_2422 2654806 2656092 - flagellar basal body FlaE domain protein PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein%3B flagellar basal body FlaE domain protein~KEGG: ypi:YpsIP31758_2321 flagellar hook protein FlgE gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2422 YPK_2423 YPK_2423 YPK_2423 2656294 2656980 - flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: yps:YPTB1674 basal-body rod modification protein FlgD gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2423 YPK_2424 YPK_2424 YPK_2424 2656995 2657399 - flagellar basal-body rod protein FlgC TIGRFAM: flagellar basal-body rod protein FlgC~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~KEGG: ypi:YpsIP31758_2323 flagellar basal-body rod protein FlgC gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2424 YPK_2425 YPK_2425 YPK_2425 2657405 2657818 - flagellar basal-body rod protein FlgB TIGRFAM: flagellar basal-body rod protein FlgB~PFAM: flagellar basal body rod protein~KEGG: ypm:YP_1594 flagellar basal-body rod protein FlgB gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2425 YPK_2426 YPK_2426 YPK_2426 2657991 2658800 + flagella basal body P-ring formation protein FlgA TIGRFAM: flagella basal body P-ring formation protein FlgA~PFAM: SAF domain protein~KEGG: ypm:YP_1595 flagella basal body P-ring formation protein FlgA gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2426 YPK_2427 YPK_2427 YPK_2427 2658951 2659253 + anti-sigma-28 factor%2C FlgM PFAM: Anti-sigma-28 factor FlgM family protein~KEGG: ypi:YpsIP31758_2327 negative regulator of flagellin synthesis gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2427 YPK_2428 YPK_2428 YPK_2428 2659272 2659712 + FlgN family protein PFAM: FlgN family protein~KEGG: ypi:YpsIP31758_2328 flagella synthesis protein FlgN gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2428 YPK_2429 YPK_2429 YPK_2429 2659892 2662801 - Invasin region 3 PFAM: Ig domain protein group 1 domain protein%3B Intimin domain protein%3B Invasin region 3~KEGG: yps:YPTB1668 putative invasin gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2429 YPK_2430 YPK_2430 YPK_2430 2663458 2663880 - flagellar FlhE family protein PFAM: flagellar FlhE family protein~KEGG: ypi:YpsIP31758_2332 flagellar protein FlhE gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2430 YPK_2431 YPK_2431 YPK_2431 2663880 2665958 - flagellar biosynthesis protein FlhA TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein~KEGG: ypn:YPN_2333 flagellar biosynthesis protein FlhA gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2431 YPK_2432 YPK_2432 YPK_2432 2665958 2667118 - flagellar biosynthetic protein FlhB TIGRFAM: flagellar biosynthetic protein FlhB~PFAM: type III secretion exporter~KEGG: ypp:YPDSF_1334 flagellar biosynthetic protein FlhB gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2432 YPK_2433 YPK_2433 YPK_2433 2667650 2668114 + conserved hypothetical protein KEGG: yps:YPTB1822 hypothetical protein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2433 YPK_2434 YPK_2434 YPK_2434 2668108 2668434 + protein of unknown function DUF1493 PFAM: protein of unknown function DUF1493~KEGG: yps:YPTB1821 putative acyl carrier protein gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2434 YPK_2435 YPK_2435 YPK_2435 2668957 2669298 - conserved hypothetical protein KEGG: ypm:YP_1606 hypothetical protein gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2435 YPK_2436 YPK_2436 YPK_2436 2669395 2670279 - copper resistance D domain protein PFAM: copper resistance D domain protein~KEGG: ypm:YP_1607 putative copper resistance protein D gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2436 YPK_2437 YPK_2437 YPK_2437 2670282 2670668 - copper resistance protein CopC PFAM: copper resistance protein CopC~KEGG: ypi:YpsIP31758_2339 copper resistance protein CopC gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2437 YPK_2438 YPK_2438 YPK_2438 2671047 2671556 - Ferroxidase PFAM: Ferritin Dps family protein~KEGG: ypi:YpsIP31758_2341 ferritin family protein gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2438 YPK_2439 YPK_2439 YPK_2439 2671957 2672187 + DNA polymerase II beta subunit PFAM: DNA polymerase II beta subunit~KEGG: ypi:YpsIP31758_2343 DNA polymerase III%2C theta subunit gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2439 YPK_2440 YPK_2440 YPK_2440 2672247 2673197 - proline iminopeptidase KEGG: ypi:YpsIP31758_2344 proline iminopeptidase~TIGRFAM: proline iminopeptidase~PFAM: alpha/beta hydrolase fold gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2440 YPK_2441 YPK_2441 YPK_2441 2673519 2673632 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2345 hypothetical protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2441 YPK_2442 YPK_2442 YPK_2442 2673919 2675970 - Oligopeptidase B PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9A prolyl oligopeptidase domain protein beta-propeller~KEGG: ypi:YpsIP31758_2346 protease II gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2442 YPK_2443 YPK_2443 YPK_2443 2676280 2676705 - conserved hypothetical protein KEGG: ypp:YPDSF_1344 hypothetical protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2443 YPK_2444 YPK_2444 YPK_2444 2676797 2677105 - protein of unknown function DUF437 PFAM: protein of unknown function DUF437~KEGG: ypm:YP_1615 hypothetical protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2444 YPK_2445 YPK_2445 YPK_2445 2677145 2677465 - YebG family protein PFAM: YebG family protein~KEGG: ypi:YpsIP31758_2349 hypothetical protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2445 YPK_2446 YPK_2446 YPK_2446 2677559 2678941 - DEAD/DEAH box helicase domain protein PFAM: helicase domain protein%3B DbpA RNA-binding domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_2350 ATP-independent RNA helicase DbpA gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2446 YPK_2447 YPK_2447 YPK_2447 2679254 2680435 + phosphoribosylglycinamide formyltransferase 2 KEGG: ypm:YP_1618 phosphoribosylglycinamide formyltransferase~TIGRFAM: phosphoribosylglycinamide formyltransferase 2~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2447 YPK_2448 YPK_2448 YPK_2448 2680561 2680818 - protein of unknown function UPF0181 PFAM: protein of unknown function UPF0181~KEGG: ypi:YpsIP31758_2352 hypothetical protein gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2448 YPK_2449 YPK_2449 YPK_2449 2680983 2682359 + para-aminobenzoate synthase%2C subunit I TIGRFAM: para-aminobenzoate synthase%2C subunit I~PFAM: Anthranilate synthase component I domain protein%3B Chorismate binding-like~KEGG: yps:YPTB1649 para-aminobenzoate synthase component I gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2449 YPK_2450 YPK_2450 YPK_2450 2682356 2682955 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ypi:YpsIP31758_2354 hydrolase%2C NUDIX family gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2450 YPK_2451 YPK_2451 YPK_2451 2683683 2685047 + L-serine dehydratase 1 KEGG: ypi:YpsIP31758_2355 L-serine ammonia-lyase~TIGRFAM: L-serine dehydratase 1~PFAM: serine dehydratase alpha chain%3B serine dehydratase beta chain gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2451 YPK_2452 YPK_2452 YPK_2452 2685327 2685824 - 4-hydroxyphenylacetate 3-monooxygenase%2C reductase subunit TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase%2C reductase subunit~PFAM: flavin reductase domain protein FMN-binding~KEGG: ypi:YpsIP31758_2356 4-hydroxyphenylacetate 3-monooxygenase%2C reductase component gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2452 YPK_2453 YPK_2453 YPK_2453 2685845 2687407 - 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase subunit TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase subunit~PFAM: 4-hydroxyphenylacetate 3-hydroxylase~KEGG: ypi:YpsIP31758_2357 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2453 YPK_2454 YPK_2454 YPK_2454 2687475 2688842 - 4-hydroxyphenylacetate transporter TIGRFAM: 4-hydroxyphenylacetate transporter~PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_1625 putative 4-hydroxyphenylacetate permease gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2454 YPK_2455 YPK_2455 YPK_2455 2688868 2689674 - 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase KEGG: ypm:YP_1626 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~TIGRFAM: 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~PFAM: HpcH/HpaI aldolase gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2455 YPK_2456 YPK_2456 YPK_2456 2689685 2690488 - 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase KEGG: ypi:YpsIP31758_2360 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase~TIGRFAM: 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase~PFAM: Hydratase/decarboxylase gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2456 YPK_2457 YPK_2457 YPK_2457 2690482 2690880 - 5-carboxymethyl-2-hydroxymuconate isomerase PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase~KEGG: ypi:YpsIP31758_2361 5-carboxymethyl-2-hydroxymuconate delta isomerase gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2457 YPK_2458 YPK_2458 YPK_2458 2690905 2691762 - 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase KEGG: ypi:YpsIP31758_2362 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~TIGRFAM: 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2458 YPK_2459 YPK_2459 YPK_2459 2691881 2693347 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase KEGG: yps:YPTB1639 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase_ gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2459 YPK_2460 YPK_2460 YPK_2460 2693344 2694108 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2CHpaG2 subunit KEGG: ypi:YpsIP31758_2364 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C C-terminal subunit~TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2CHpaG2 subunit~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2460 YPK_2461 YPK_2461 YPK_2461 2694105 2694737 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C HpaG1 subunit KEGG: ypi:YpsIP31758_2365 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C N-terminal subunit~TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C HpaG1 subunit~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2461 YPK_2462 YPK_2462 YPK_2462 2695107 2695574 + transcriptional regulator%2C MarR family TIGRFAM: homoprotocatechuate degradation operon regulator%2C HpaR~PFAM: regulatory protein MarR~KEGG: ypi:YpsIP31758_2366 homoprotocatechuate degradation operon regulator%2C HpaR gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2462 YPK_2463 YPK_2463 YPK_2463 2695676 2697220 - Integral membrane protein TerC PFAM: CBS domain containing protein%3B transporter-associated region%3B Integral membrane protein TerC~KEGG: ypm:YP_1633 hypothetical protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2463 YPK_2464 YPK_2464 YPK_2464 2697931 2698905 + PTS system%2C mannose/fructose/sorbose family%2C IIB subunit KEGG: ypa:YPA_1130 PTS system%2C mannose-specific IIAB component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIB subunit%3B PTS system%2C mannose/fructose/sorbose family%2C IIA subunit~PFAM: PTS system fructose subfamily IIA component%3B PTS system sorbose subfamily IIB component gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2464 YPK_2465 YPK_2465 YPK_2465 2698997 2699794 + PTS system%2C mannose/fructose/sorbose family%2C IIC subunit TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIC subunit~PFAM: phosphotransferase system PTS sorbose-specific IIC subunit~KEGG: ypa:YPA_1129 PTS system%2C mannose-specific IIC component gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2465 YPK_2466 YPK_2466 YPK_2466 2699810 2700688 + PTS system%2C mannose/fructose/sorbose family%2C IID subunit TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IID subunit~PFAM: PTS system mannose/fructose/sorbose family IID component~KEGG: ypa:YPA_1128 PTS system%2C mannose-specific IID component gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2466 YPK_2467 YPK_2467 YPK_2467 2700888 2701349 + protein of unknown function DUF986 PFAM: protein of unknown function DUF986~KEGG: ypi:YpsIP31758_2371 hypothetical protein gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2467 YPK_2468 YPK_2468 YPK_2468 2701775 2702344 + protein of unknown function DUF204 PFAM: protein of unknown function DUF204~KEGG: ypa:YPA_1126 hypothetical protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2468 YPK_2469 YPK_2469 YPK_2469 2702505 2704811 - TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypi:YpsIP31758_2373 ferrichrome receptor FcuA gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2469 YPK_2470 YPK_2470 YPK_2470 2705155 2707236 + diguanylate cyclase with PAS/PAC sensor KEGG: ypa:YPA_1124 hypothetical protein~TIGRFAM: PAS sensor protein%3B diguanylate cyclase~PFAM: GGDEF domain containing protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein%3B PAC repeat-containing protein gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2470 YPK_2471 YPK_2471 YPK_2471 2707458 2707736 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2375 hypothetical protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2471 YPK_2472 YPK_2472 YPK_2472 2707958 2708797 - rRNA (guanine-N(1)-)-methyltransferase PFAM: Methyltransferase type 11~KEGG: ypi:YpsIP31758_2376 ribosomal RNA large subunit methyltransferase A gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2472 YPK_2473 YPK_2473 YPK_2473 2709171 2709944 + protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: ypi:YpsIP31758_2377 hypothetical protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2473 YPK_2474 YPK_2474 YPK_2474 2710035 2710244 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: spe:Spro_2822 cold-shock DNA-binding domain protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2474 YPK_2475 YPK_2475 YPK_2475 2710287 2710403 - conserved hypothetical protein KEGG: yen:YE1764 hypothetical protein gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2475 YPK_2476 YPK_2476 YPK_2476 2711405 2712013 + Antimicrobial peptide resistance and lipid A acylation PagP PFAM: Antimicrobial peptide resistance and lipid A acylation PagP~KEGG: yps:YPTB1622 hypothetical protein gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2476 YPK_2477 YPK_2477 YPK_2477 2712309 2713682 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypa:YPA_1117 aromatic amino acid transport protein gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2477 YPK_2478 YPK_2478 YPK_2478 2713919 2714164 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2382 hypothetical protein gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2478 YPK_2479 YPK_2479 YPK_2479 2714273 2714572 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2383 hypothetical protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2479 YPK_2480 YPK_2480 YPK_2480 2714835 2715110 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2384 hypothetical protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2480 YPK_2481 YPK_2481 YPK_2481 2715693 2715926 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2385 hypothetical protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2481 YPK_2482 YPK_2482 YPK_2482 2716017 2716256 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2386 hypothetical protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2482 YPK_2483 YPK_2483 YPK_2483 2716467 2716580 - hypothetical protein gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2483 YPK_2484 YPK_2484 YPK_2484 2716811 2717197 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: ypm:YP_1478 AraC-family transcriptional regulatory protein gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2484 YPK_2485 YPK_2485 YPK_2485 2717279 2717443 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2388 hypothetical protein gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2485 YPK_2486 YPK_2486 YPK_2486 2717470 2717634 - conserved hypothetical protein KEGG: ypm:YP_1476 hypothetical protein gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2486 YPK_2487 YPK_2487 YPK_2487 2718099 2719817 + ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_1109 putative ABC transporter (ATP-binding protein) gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2487 YPK_2488 YPK_2488 YPK_2488 2719920 2720771 + protein of unknown function RIO1 PFAM: protein of unknown function RIO1~KEGG: ypa:YPA_1108 hypothetical protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2488 YPK_2489 YPK_2489 YPK_2489 2721008 2721292 + YCII-related PFAM: YCII-related~KEGG: ypi:YpsIP31758_2391 YciI domain protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2489 YPK_2490 YPK_2490 YPK_2490 2721682 2722494 + protein of unknown function DUF980 PFAM: protein of unknown function DUF980~KEGG: ypa:YPA_1106 hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2490 YPK_2491 YPK_2491 YPK_2491 2722900 2723916 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_1471 transcriptional regulators gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2491 YPK_2492 YPK_2492 YPK_2492 2724271 2725578 + oligosaccharide/H+ symporter%2C major facilitator superfamily (MFS) TIGRFAM: oligosaccharide/H+ symporter%2C major facilitator superfamily (MFS)~PFAM: proton/sugar symporter LacY%3B major facilitator superfamily MFS_1~KEGG: yps:YPTB1609 MFS lactose lactose-proton symporter gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2492 YPK_2493 YPK_2493 YPK_2493 2725656 2727782 + glycoside hydrolase clan GH-D PFAM: glycoside hydrolase clan GH-D~KEGG: ypn:YPN_2398 alpha-galactosidase gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2493 YPK_2494 YPK_2494 YPK_2494 2727799 2727963 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2396 hypothetical protein gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2494 YPK_2495 YPK_2495 YPK_2495 2728229 2728969 - 4'-phosphopantetheinyl transferase PFAM: 4'-phosphopantetheinyl transferase~KEGG: yps:YPTB1607 putative phosphopantetheinyl transferase gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2495 YPK_2496 YPK_2496 YPK_2496 2729478 2730470 + TRAP dicarboxylate transporter%2C DctP subunit TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: TRAP dicarboxylate transporter- DctP subunit~KEGG: ypi:YpsIP31758_2399 TRAP transporter solute receptor%2C DctP family gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2496 YPK_2497 YPK_2497 YPK_2497 2730594 2731100 + Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: ypi:YpsIP31758_2400 TRAP transporter%2C DctQ-like membrane protein gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2497 YPK_2498 YPK_2498 YPK_2498 2731120 2732412 + TRAP dicarboxylate transporter%2C DctM subunit TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit~KEGG: ypi:YpsIP31758_2401 TRAP transporter%2C DctM subunit gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2498 YPK_2499 YPK_2499 YPK_2499 2732670 2733299 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~KEGG: ypa:YPA_0872 putative GerR-family transcriptional regulatory protein gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2499 YPK_2500 YPK_2500 YPK_2500 2734183 2734722 - conserved hypothetical protein KEGG: ypa:YPA_0871 hypothetical protein gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2500 YPK_2501 YPK_2501 YPK_2501 2734812 2735507 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2404 hypothetical protein gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2501 YPK_2502 YPK_2502 YPK_2502 2736084 2736965 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: ypi:YpsIP31758_2405 polysaccharide deacetylase family protein gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2502 YPK_2503 YPK_2503 YPK_2503 2737001 2738341 + major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2406 transporter%2C major facilitator family gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2503 YPK_2504 YPK_2504 YPK_2504 2738369 2739793 - MATE efflux family protein TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~KEGG: ypa:YPA_0867 putative sugar transporter gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2504 YPK_2505 YPK_2505 YPK_2505 2740093 2741460 + Argininosuccinate synthase PFAM: argininosuccinate synthase~KEGG: ypi:YpsIP31758_2408 argininosuccinate synthase gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2505 YPK_2506 YPK_2506 YPK_2506 2741665 2742810 - FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: ypa:YPA_0864 L-lactate dehydrogenase gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2506 YPK_2507 YPK_2507 YPK_2507 2742855 2742995 - conserved hypothetical protein KEGG: ypm:YP_1456 hypothetical protein gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2507 YPK_2508 YPK_2508 YPK_2508 2743107 2744384 - Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ypa:YPA_0863 putative racemase gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2508 YPK_2509 YPK_2509 YPK_2509 2744416 2745258 - 5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: ypi:YpsIP31758_2411 fumarylacetoacetate hydrolase family protein gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2509 YPK_2510 YPK_2510 YPK_2510 2745306 2746046 - short-chain dehydrogenase/reductase SDR PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypa:YPA_0861 putative oxidoreductase gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2510 YPK_2511 YPK_2511 YPK_2511 2746512 2746934 + putative thiol-disulphide oxidoreductase DCC PFAM: putative thiol-disulphide oxidoreductase DCC~KEGG: ypm:YP_1452 hypothetical protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2511 YPK_2512 YPK_2512 YPK_2512 2746943 2748247 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB1573 MFS superfamily%2C anion:cation symporter family transporter gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2512 YPK_2513 YPK_2513 YPK_2513 2749287 2752514 + Ig domain protein group 1 domain protein PFAM: Ig domain protein group 1 domain protein~KEGG: yps:YPTB1572 putative invasin gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2513 YPK_2514 YPK_2514 YPK_2514 2752658 2752975 - protein of unknown function DUF496 PFAM: protein of unknown function DUF496~KEGG: ypi:YpsIP31758_2417 hypothetical protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2514 YPK_2515 YPK_2515 YPK_2515 2753409 2754518 - Male sterility domain PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain~KEGG: yps:YPTB1570 hypothetical protein gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2515 YPK_2516 YPK_2516 YPK_2516 2754811 2756241 + Exodeoxyribonuclease I PFAM: Exonuclease RNase T and DNA polymerase III%3B Exonuclease domain protein~KEGG: yps:YPTB1569 exodeoxyribonuclease I gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2516 YPK_2517 YPK_2517 YPK_2517 2758599 2759990 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypi:YpsIP31758_2421 amino acid permease family protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2517 YPK_2518 YPK_2518 YPK_2518 2759980 2760195 - conserved hypothetical protein KEGG: yen:YE2760 hypothetical protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2518 YPK_2519 YPK_2519 YPK_2519 2760449 2761540 - Glycerol dehydrogenase PFAM: iron-containing alcohol dehydrogenase%3B 3-dehydroquinate synthase~KEGG: ypi:YpsIP31758_2422 alcohol dehydrogenase%2C iron-containing gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2519 YPK_2520 YPK_2520 YPK_2520 2761826 2763382 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB1566 putative ABC sugar transporter%2C fused ATP binding domains gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2520 YPK_2521 YPK_2521 YPK_2521 2763379 2764374 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypa:YPA_0848 ribose transport system%2C permease protein gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2521 YPK_2522 YPK_2522 YPK_2522 2764445 2764540 + hypothetical protein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2522 YPK_2523 YPK_2523 YPK_2523 2764530 2765066 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2425 hypothetical protein gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2523 YPK_2524 YPK_2524 YPK_2524 2765221 2766048 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: ypa:YPA_0846 hypothetical protein gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2524 YPK_2525 YPK_2525 YPK_2525 2766762 2767661 + ATP phosphoribosyltransferase KEGG: ypi:YpsIP31758_2428 ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase~PFAM: Histidine biosynthesis protein HisG domain%3B ATP phosphoribosyltransferase catalytic region gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2525 YPK_2526 YPK_2526 YPK_2526 2767665 2768996 + Histidinol dehydrogenase PFAM: histidinol dehydrogenase~KEGG: ypa:YPA_0844 histidinol dehydrogenase gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2526 YPK_2527 YPK_2527 YPK_2527 2768999 2770147 + histidinol-phosphate aminotransferase TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_2430 histidinol-phosphate aminotransferase gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2527 YPK_2528 YPK_2528 YPK_2528 2770144 2771211 + histidinol-phosphatase KEGG: ypi:YpsIP31758_2431 histidine biosynthesis bifunctional protein HisB~TIGRFAM: histidinol-phosphatase%3B histidinol-phosphate phosphatase family protein%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~PFAM: imidazoleglycerol-phosphate dehydratase%3B Polynucleotide kinase 3 phosphatase central region gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2528 YPK_2529 YPK_2529 YPK_2529 2771211 2771801 + imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: glutamine amidotransferase class-I~KEGG: ypa:YPA_0840 amidotransferase gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2529 YPK_2530 YPK_2530 YPK_2530 2771807 2772544 + phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase%3B histidine biosynthesis protein~KEGG: ypa:YPA_0839 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2530 YPK_2531 YPK_2531 YPK_2531 2772526 2773302 + imidazoleglycerol phosphate synthase%2C cyclase subunit TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: histidine biosynthesis protein~KEGG: ypi:YpsIP31758_2434 imidazoleglycerol phosphate synthase%2C cyclase subunit gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2531 YPK_2532 YPK_2532 YPK_2532 2773296 2773910 + phosphoribosyl-ATP diphosphatase TIGRFAM: phosphoribosyl-ATP diphosphatase~PFAM: phosphoribosyl-AMP cyclohydrolase%3B phosphoribosyl-ATP pyrophosphohydrolase~KEGG: ypi:YpsIP31758_2435 histidine biosynthesis bifunctional protein hisIE gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2532 YPK_2533 YPK_2533 YPK_2533 2774040 2774498 - transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2533 YPK_2534 YPK_2534 YPK_2534 2774488 2774643 - conserved hypothetical protein KEGG: ypp:YPDSF_2525 hypothetical protein gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2534 YPK_2535 YPK_2535 YPK_2535 2774820 2776229 - 6-phosphogluconate dehydrogenase%2C decarboxylating KEGG: ypi:YpsIP31758_2436 6-phosphogluconate dehydrogenase%2C decarboxylating~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase domain protein%3B 6-phosphogluconate dehydrogenase NAD-binding gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2535 YPK_2536 YPK_2536 YPK_2536 2776615 2777508 - UTP-glucose-1-phosphate uridylyltransferase TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase~KEGG: ypa:YPA_0835 UTP-glucose-1-phosphate uridylyltransferase gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2536 YPK_2537 YPK_2537 YPK_2537 2777592 2778482 - UTP-glucose-1-phosphate uridylyltransferase KEGG: ypi:YpsIP31758_2438 UTP-glucose-1-phosphate uridylyltransferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2537 YPK_2538 YPK_2538 YPK_2538 2779429 2781243 + IucA/IucC family protein PFAM: IucA/IucC family protein~KEGG: ypi:YpsIP31758_2439 siderophore biosynthesis protein%2C IucA/IucC family gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2538 YPK_2539 YPK_2539 YPK_2539 2781473 2783734 + TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: yps:YPTB1549 putative OMR family iron-siderophore receptor gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2539 YPK_2540 YPK_2540 YPK_2540 2783824 2784903 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypi:YpsIP31758_2441 ferric enterobactin ABC transporter%2C ferric enterobactin-binding periplasmic protein FepB gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2540 YPK_2541 YPK_2541 YPK_2541 2784900 2785940 + transport system permease protein PFAM: transport system permease protein~KEGG: yps:YPTB1547 putative ABC iron-siderophore transporter%2C permease subunit gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2541 YPK_2542 YPK_2542 YPK_2542 2785927 2786967 + transport system permease protein PFAM: transport system permease protein~KEGG: ypa:YPA_0828 putative iron-siderophore transport system%2C membrane permease component gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2542 YPK_2543 YPK_2543 YPK_2543 2786994 2787812 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0827 putative iron-siderophore transport system%2C ATP-binding component gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2543 YPK_2544 YPK_2544 YPK_2544 2787939 2789783 - IucA/IucC family protein PFAM: IucA/IucC family protein~KEGG: yps:YPTB1544 putative siderophore biosynthetic enzyme gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2544 YPK_2545 YPK_2545 YPK_2545 2789780 2790358 - putative siderophore biosynthetic enzyme KEGG: ypa:YPA_0825 putative siderophore biosynthetic enzyme gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2545 YPK_2546 YPK_2546 YPK_2546 2790358 2791656 - L-lysine 6-monooxygenase (NADPH) KEGG: ypi:YpsIP31758_2447 lysine N6-hydroxylase/L-ornithine N5-oxygenase family gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2546 YPK_2547 YPK_2547 YPK_2547 2791691 2793238 - Pyridoxal-dependent decarboxylase PFAM: Pyridoxal-dependent decarboxylase~KEGG: yps:YPTB1541 putative decarboxylase gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2547 YPK_2548 YPK_2548 YPK_2548 2793389 2794168 - ferric iron reductase PFAM: ferric iron reductase~KEGG: ypi:YpsIP31758_2449 ferric iron reductase protein FhuF gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2548 YPK_2549 YPK_2549 YPK_2549 2794610 2796196 + Integral membrane protein TerC PFAM: CBS domain containing protein%3B transporter-associated region%3B Integral membrane protein TerC~KEGG: ypm:YP_1416 hypothetical protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2549 YPK_2550 YPK_2550 YPK_2550 2796341 2798197 - AsmA family protein PFAM: AsmA family protein~KEGG: ypa:YPA_0820 hypothetical protein gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2550 YPK_2551 YPK_2551 YPK_2551 2798384 2798965 - deoxycytidine triphosphate deaminase TIGRFAM: deoxycytidine triphosphate deaminase~PFAM: deoxyUTP pyrophosphatase~KEGG: ypa:YPA_0819 deoxycytidine triphosphate deaminase gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2551 YPK_2552 YPK_2552 YPK_2552 2799070 2799711 - uridine kinase TIGRFAM: uridine kinase~PFAM: phosphoribulokinase/uridine kinase~KEGG: ypi:YpsIP31758_2453 uridine kinase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2552 YPK_2553 YPK_2553 YPK_2553 2799956 2801068 - putative ATPase Mrp KEGG: ypi:YpsIP31758_2454 putative ATPase Mrp gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2553 YPK_2554 YPK_2554 YPK_2554 2801333 2803360 + methionyl-tRNA synthetase TIGRFAM: methionyl-tRNA synthetase%3B methionyl-tRNA synthetase%2C beta subunit~PFAM: t-RNA-binding domain protein%3B tRNA synthetase class I (M)~KEGG: ypi:YpsIP31758_2455 methionyl-tRNA synthetase gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2554 YPK_2555 YPK_2555 YPK_2555 2803489 2804319 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2456 hypothetical protein gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2555 YPK_2556 YPK_2556 YPK_2556 2804853 2805929 + putative sugar ABC transporter KEGG: ypa:YPA_0812 putative sugar ABC transporter gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2556 YPK_2557 YPK_2557 YPK_2557 2805947 2807200 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2458 hypothetical protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2557 YPK_2558 YPK_2558 YPK_2558 2807536 2808717 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypa:YPA_0810 putative multidrug resistance protein gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2558 YPK_2559 YPK_2559 YPK_2559 2808959 2809366 + LrgA family protein PFAM: LrgA family protein~KEGG: ypi:YpsIP31758_2460 LrgA family protein gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2559 YPK_2560 YPK_2560 YPK_2560 2809363 2810058 + LrgB family protein PFAM: LrgB family protein~KEGG: ypi:YpsIP31758_2461 LrgB family protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2560 YPK_2561 YPK_2561 YPK_2561 2810384 2811268 + cytidine deaminase KEGG: ypa:YPA_0807 cytidine deaminase~TIGRFAM: cytidine deaminase~PFAM: CMP/dCMP deaminase zinc-binding%3B Cytidine and deoxycytidylate deaminase zinc-binding domain protein gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2561 YPK_2562 YPK_2562 YPK_2562 2811624 2813321 + Malate dehydrogenase (oxaloacetate-decarboxylating) PFAM: malic protein domain protein%3B malic protein NAD-binding~KEGG: ypa:YPA_0806 NAD-dependent malic enzyme gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2562 YPK_2563 YPK_2563 YPK_2563 2813602 2814339 + protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: ypa:YPA_0805 hypothetical protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2563 YPK_2564 YPK_2564 YPK_2564 2814784 2815794 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypi:YpsIP31758_2465 galactose ABC transporter%2C permease protein gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2564 YPK_2565 YPK_2565 YPK_2565 2815815 2817335 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0803 galactoside transport ATP-binding protein gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2565 YPK_2566 YPK_2566 YPK_2566 2817565 2818557 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypa:YPA_0802 galactose-binding protein gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2566 YPK_2567 YPK_2567 YPK_2567 2819305 2820471 - protein of unknown function DUF418 PFAM: protein of unknown function DUF405%3B protein of unknown function DUF418~KEGG: ypi:YpsIP31758_2469 hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2567 YPK_2568 YPK_2568 YPK_2568 2820526 2821188 - GTP cyclohydrolase I PFAM: GTP cyclohydrolase I~KEGG: ypa:YPA_0800 GTP cyclohydrolase I gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2568 YPK_2569 YPK_2569 YPK_2569 2821372 2822523 - protein of unknown function DUF1228 PFAM: protein of unknown function DUF1228%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2471 transporter%2C major facilitator family gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2569 YPK_2570 YPK_2570 YPK_2570 2822659 2823528 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypa:YPA_0798 putative LysR-family transcriptional regulatory protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2570 YPK_2571 YPK_2571 YPK_2571 2823802 2824941 + S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ypm:YP_1392 probable alcohol dehydrogenase gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2571 YPK_2572 YPK_2572 YPK_2572 2824962 2825804 + S-formylglutathione hydrolase KEGG: yps:YPTB1516 putative esterase~TIGRFAM: S-formylglutathione hydrolase~PFAM: putative esterase gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2572 YPK_2573 YPK_2573 YPK_2573 2826073 2826273 + conserved hypothetical protein KEGG: ypm:YP_1390 hypothetical protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2573 YPK_2574 YPK_2574 YPK_2574 2826357 2828717 + putative membrane protein KEGG: yps:YPTB1515 putative membrane protein gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2574 YPK_2575 YPK_2575 YPK_2575 2828719 2829981 + efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~KEGG: yps:YPTB1514 putative exported protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2575 YPK_2576 YPK_2576 YPK_2576 2829983 2830651 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0793 ABC transporter ATP-binding protein gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2576 YPK_2577 YPK_2577 YPK_2577 2830661 2831971 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: ypp:YPDSF_1480 heme-binding protein gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2577 YPK_2578 YPK_2578 YPK_2578 2832506 2833780 + molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain%3B MoeA domain protein domain I and II%3B MoeA domain protein domain IV~KEGG: yps:YPTB1511 molybdopterin biosynthesis protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2578 YPK_2579 YPK_2579 YPK_2579 2833782 2834552 + molybdopterin synthase sulfurylase MoeB TIGRFAM: molybdopterin synthase sulfurylase MoeB~PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein~KEGG: ypa:YPA_0790 molybdopterin biosynthesis protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2579 YPK_2580 YPK_2580 YPK_2580 2834624 2835271 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2482 hypothetical protein gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2580 YPK_2581 YPK_2581 YPK_2581 2835489 2837084 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB1508 ABC transporter ATP-binding protein gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2581 YPK_2582 YPK_2582 YPK_2582 2837768 2838391 + conserved hypothetical protein KEGG: ypp:YPDSF_1485 hypothetical protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2582 YPK_2583 YPK_2583 YPK_2583 2838599 2839966 - ImpA domain protein PFAM: ImpA domain protein~KEGG: ypp:YPDSF_1486 hypothetical protein gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2583 YPK_2584 YPK_2584 YPK_2584 2839991 2840443 - type VI secretion system lysozyme-related protein TIGRFAM: type VI secretion system lysozyme-related protein~PFAM: GPW/gp25 family protein~KEGG: yps:YPTB1505 hypothetical protein gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2584 YPK_2585 YPK_2585 YPK_2585 2840443 2841024 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2487 hypothetical protein gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2585 YPK_2586 YPK_2586 YPK_2586 2840999 2842084 - type VI secretion protein%2C VC_A0111 family TIGRFAM: type VI secretion protein%2C VC_A0111 family~PFAM: protein of unknown function DUF1305~KEGG: yps:YPTB1503 hypothetical protein gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2586 YPK_2587 YPK_2587 YPK_2587 2842048 2843811 - type VI secretion protein%2C VC_A0110 family TIGRFAM: type VI secretion protein%2C VC_A0110 family~PFAM: protein of unknown function DUF879~KEGG: ypp:YPDSF_1490 hypothetical protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2587 YPK_2588 YPK_2588 YPK_2588 2844032 2844502 - conserved hypothetical protein KEGG: yps:YPTB1501 hypothetical protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2588 YPK_2589 YPK_2589 YPK_2589 2844502 2845560 - conserved hypothetical protein KEGG: ypp:YPDSF_1492 hypothetical protein gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2589 YPK_2590 YPK_2590 YPK_2590 2845578 2847179 - type VI secretion-associated protein%2C VC_A0119 family TIGRFAM: type VI secretion-associated protein%2C VC_A0119 family~PFAM: ImpA domain protein~KEGG: ypi:YpsIP31758_2492 ImpA domain protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2590 YPK_2591 YPK_2591 YPK_2591 2847223 2850645 - ImcF domain protein PFAM: ImcF domain protein%3B protein of unknown function DUF1215~KEGG: yps:YPTB1498 hypothetical protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2591 YPK_2592 YPK_2592 YPK_2592 2850642 2851874 - conserved hypothetical protein KEGG: ypa:YPA_0775 hypothetical protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2592 YPK_2593 YPK_2593 YPK_2593 2851981 2852763 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2493 hypothetical protein gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2593 YPK_2594 YPK_2594 YPK_2594 2852812 2853246 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2494 hypothetical protein gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2594 YPK_2595 YPK_2595 YPK_2595 2853585 2853857 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2493 hypothetical protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2595 YPK_2596 YPK_2596 YPK_2596 2853902 2854720 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2493 hypothetical protein gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2596 YPK_2597 YPK_2597 YPK_2597 2854732 2855034 - hypothetical protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2597 YPK_2598 YPK_2598 YPK_2598 2855039 2855605 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2510 hypothetical protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2598 YPK_2599 YPK_2599 YPK_2599 2855804 2855923 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2510 hypothetical protein gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2599 YPK_2600 YPK_2600 YPK_2600 2855972 2856472 - type VI secretion protein%2C VC_A0107 family TIGRFAM: type VI secretion protein%2C VC_A0107 family~PFAM: conserved hypothetical protein~KEGG: ypp:YPDSF_1511 hypothetical protein gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2600 YPK_2601 YPK_2601 YPK_2601 2857137 2857379 - hypothetical protein KEGG: yps:YPTB1482 hypothetical protein gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2601 YPK_2602 YPK_2602 YPK_2602 2857435 2858283 - putative acyltransferase KEGG: ypi:YpsIP31758_2512 putative acyltransferase gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2602 YPK_2603 YPK_2603 YPK_2603 2858382 2858630 - putative acyl carrier protein KEGG: ypi:YpsIP31758_2513 putative acyl carrier protein gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2603 YPK_2604 YPK_2604 YPK_2604 2858678 2859010 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2514 hypothetical protein gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2604 YPK_2605 YPK_2605 YPK_2605 2859205 2859993 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: yps:YPTB1478 putative 3-oxoacyl-acyl carrier protein reductase gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2605 YPK_2606 YPK_2606 YPK_2606 2859996 2860748 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ypi:YpsIP31758_2516 enoyl-CoA hydratase/isomerase family protein gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2606 YPK_2607 YPK_2607 YPK_2607 2860750 2861469 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ypi:YpsIP31758_2517 enoyl-CoA hydratase/isomerase family protein gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2607 YPK_2608 YPK_2608 YPK_2608 2861462 2862700 - Hydroxymethylglutaryl-coenzyme A synthase domain protein PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain%3B Hydroxymethylglutaryl-coenzyme A synthase domain protein~KEGG: ypi:YpsIP31758_2518 putative hydroxymethylglutaryl-coenzyme A synthase gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2608 YPK_2609 YPK_2609 YPK_2609 2862716 2863453 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypi:YpsIP31758_2519 short-chain dehydrogenase/reductase family protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2609 YPK_2610 YPK_2610 YPK_2610 2863455 2864738 - Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: ypi:YpsIP31758_2520 beta-ketoacyl synthase family protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2610 YPK_2611 YPK_2611 YPK_2611 2864728 2865252 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ~KEGG: ypi:YpsIP31758_2521 thioester dehydratase family protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2611 YPK_2612 YPK_2612 YPK_2612 2865516 2865836 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2522 hypothetical protein gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2612 YPK_2613 YPK_2613 YPK_2613 2866465 2867211 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypa:YPA_0745 putative short chain dehydrogenase gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2613 YPK_2614 YPK_2614 YPK_2614 2867365 2869782 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: ypp:YPDSF_1523 oxidoreductase gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2614 YPK_2615 YPK_2615 YPK_2615 2869924 2872968 - Cytotoxic necrotizing factor PFAM: Cytotoxic necrotizing factor~KEGG: eci:UTI89_C4921 cytotoxic necrotizing factor 1 gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2615 YPK_2616 YPK_2616 YPK_2616 2873470 2873757 - transposase KEGG: ypp:YPDSF_1526 transposase gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2616 YPK_2617 YPK_2617 YPK_2617 2873801 2874001 - conserved hypothetical protein KEGG: ypk:y2722 hypothetical protein gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2617 YPK_2618 YPK_2618 YPK_2618 2874509 2874838 + sulfur relay protein%2C TusE/DsrC/DsvC family TIGRFAM: sulfur relay protein%2C TusE/DsrC/DsvC family~PFAM: DsrC family protein~KEGG: ypi:YpsIP31758_2529 sulfurtransferase TusE gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2618 YPK_2619 YPK_2619 YPK_2619 2874890 2875168 - acylphosphatase PFAM: acylphosphatase~KEGG: ypa:YPA_0738 putative acylphosphatase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2619 YPK_2620 YPK_2620 YPK_2620 2875262 2876452 + PUA domain containing protein SMART: PUA domain containing protein~KEGG: yps:YPTB1463 hypothetical protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2620 YPK_2621 YPK_2621 YPK_2621 2876513 2876830 + hemimethylated DNA binding protein TIGRFAM: hemimethylated DNA binding protein~PFAM: Hemimethylated DNA-binding region~KEGG: ypa:YPA_0736 hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2621 YPK_2622 YPK_2622 YPK_2622 2876939 2877355 - CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: yps:YPTB1461 hypothetical protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2622 YPK_2623 YPK_2623 YPK_2623 2877671 2878351 + conserved hypothetical protein KEGG: ypa:YPA_0734 hypothetical protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2623 YPK_2624 YPK_2624 YPK_2624 2878530 2878994 + methylglyoxal synthase KEGG: ypi:YpsIP31758_2535 methylglyoxal synthase~TIGRFAM: methylglyoxal synthase~PFAM: MGS domain protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2624 YPK_2625 YPK_2625 YPK_2625 2879055 2881109 - UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: ypi:YpsIP31758_2536 helicase IV gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2625 YPK_2626 YPK_2626 YPK_2626 2881303 2881749 + protein of unknown function DUF307 PFAM: protein of unknown function DUF307~KEGG: ypa:YPA_0731 hypothetical protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2626 YPK_2627 YPK_2627 YPK_2627 2881779 2883917 + hypothetical membrane protein TIGRFAM: hypothetical membrane protein%3B integral membrane protein%2C YccS/YhfK family~PFAM: protein of unknown function DUF893 YccS/YhfK~KEGG: ypi:YpsIP31758_2538 inner membrane protein YccS gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2627 YPK_2628 YPK_2628 YPK_2628 2884019 2884654 - regulator of competence-specific genes PFAM: TfoX domain protein~KEGG: ypi:YpsIP31758_2539 DNA transformation protein TfoX gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2628 YPK_2629 YPK_2629 YPK_2629 2884883 2885389 + cell division inhibitor SulA PFAM: cell division inhibitor SulA~KEGG: ypi:YpsIP31758_2540 cell division inhibitor SulA gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2629 YPK_2630 YPK_2630 YPK_2630 2885747 2886808 + OmpA domain protein transmembrane region-containing protein PFAM: OmpA domain protein transmembrane region-containing protein%3B OmpA/MotB domain protein~KEGG: ypi:YpsIP31758_2542 outer membrane protein A gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2630 YPK_2631 YPK_2631 YPK_2631 2886998 2887456 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2631 YPK_2632 YPK_2632 YPK_2632 2887625 2888080 - protein of unknown function DUF1047 PFAM: protein of unknown function DUF1047~KEGG: ypi:YpsIP31758_2544 hypothetical protein gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2632 YPK_2633 YPK_2633 YPK_2633 2888420 2890042 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2545 hypothetical protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2633 YPK_2634 YPK_2634 YPK_2634 2890003 2890629 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA KEGG: ypa:YPA_0723 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase~TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2634 YPK_2635 YPK_2635 YPK_2635 2890895 2891083 - conserved hypothetical protein KEGG: ypm:YP_0874 hypothetical protein gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2635 YPK_2636 YPK_2636 YPK_2636 2891329 2892603 + 3-oxoacyl-(acyl-carrier-protein) synthase 2 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase~KEGG: ypi:YpsIP31758_2547 beta-ketoacyl synthase family protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2636 YPK_2637 YPK_2637 YPK_2637 2893102 2893680 - protein of unknown function DUF330 PFAM: protein of unknown function DUF330~KEGG: ypi:YpsIP31758_2548 putative lipoprotein gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2637 YPK_2638 YPK_2638 YPK_2638 2893677 2895329 - Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: ypp:YPDSF_2274 paraquat-inducible protein B gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2638 YPK_2639 YPK_2639 YPK_2639 2895316 2896602 - integral membrane protein%2C PqiA family TIGRFAM: integral membrane protein%2C PqiA family~PFAM: Paraquat-inducible protein A~KEGG: yps:YPTB1444 putative paraquat-inducible protein A gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2639 YPK_2640 YPK_2640 YPK_2640 2896731 2898644 - ABC transporter related PFAM: SMC domain protein%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2551 ABC transporter%2C ATP-binding protein Uup gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2640 YPK_2641 YPK_2641 YPK_2641 2898650 2900770 - putative RNA methylase PFAM: putative RNA methylase%3B THUMP domain protein~KEGG: ypa:YPA_0713 hypothetical protein gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2641 YPK_2642 YPK_2642 YPK_2642 2900873 2901982 + MOSC domain protein beta barrel domain protein PFAM: ferredoxin%3B MOSC domain containing protein%3B MOSC domain protein beta barrel domain protein~KEGG: ypi:YpsIP31758_2553 MOSC/iron-sulfur cluster binding domain protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2642 YPK_2643 YPK_2643 YPK_2643 2902008 2902559 - protein of unknown function DUF1379 PFAM: protein of unknown function DUF1379~KEGG: ypi:YpsIP31758_2554 hypothetical protein gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2643 YPK_2644 YPK_2644 YPK_2644 2902742 2903752 - Dihydroorotate oxidase PFAM: dihydroorotate dehydrogenase~KEGG: ypi:YpsIP31758_2555 dihydroorotate oxidase gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2644 YPK_2645 YPK_2645 YPK_2645 2904388 2907003 - aminopeptidase N TIGRFAM: aminopeptidase N~PFAM: Peptidase M1 membrane alanine aminopeptidase~KEGG: yps:YPTB1438 putative aminopeptidase N gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2645 YPK_2646 YPK_2646 YPK_2646 2907081 2907188 - hypothetical protein gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2646 YPK_2647 YPK_2647 YPK_2647 2907685 2908905 + nicotinate phosphoribosyltransferase KEGG: ypa:YPA_0708 putative nicotinate phosphoribosyltransferase~TIGRFAM: nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2647 YPK_2648 YPK_2648 YPK_2648 2909380 2910780 + asparaginyl-tRNA synthetase TIGRFAM: asparaginyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: ypi:YpsIP31758_2558 asparaginyl-tRNA synthetase gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2648 YPK_2649 YPK_2649 YPK_2649 2911078 2912160 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: ypp:YPDSF_2284 outer membrane porin C protein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2649 YPK_2650 YPK_2650 YPK_2650 2912417 2913607 + Aspartate transaminase PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_2560 aspartate aminotransferase gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2650 YPK_2651 YPK_2651 YPK_2651 2913578 2913721 - hypothetical protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2651 YPK_2652 YPK_2652 YPK_2652 2913842 2914489 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: ypi:YpsIP31758_2561 metallo-beta-lactamase family protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2652 YPK_2653 YPK_2653 YPK_2653 2914550 2915098 - protein of unknown function DUF882 PFAM: protein of unknown function DUF882%3B Peptidase M15A~KEGG: ypi:YpsIP31758_2562 hypothetical protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2653 YPK_2654 YPK_2654 YPK_2654 2915322 2917178 - Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: yps:YPTB1431 hypothetical protein gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2654 YPK_2655 YPK_2655 YPK_2655 2917426 2921883 - chromosome segregation and condensation protein MukB domain protein PFAM: chromosome segregation and condensation protein MukB domain protein~KEGG: yps:YPTB1430 cell division protein gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2655 YPK_2656 YPK_2656 YPK_2656 2921880 2922608 - chromosome segregation and condensation protein MukE PFAM: chromosome segregation and condensation protein MukE~KEGG: ypi:YpsIP31758_2566 chromosome partition protein MukE gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2656 YPK_2657 YPK_2657 YPK_2657 2922589 2923911 - chromosome segregation and condensation protein MukF PFAM: chromosome segregation and condensation protein MukF~KEGG: ypi:YpsIP31758_2567 chromosome partition protein MukF gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2657 YPK_2658 YPK_2658 YPK_2658 2923908 2924693 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypa:YPA_0696 putative methyltransferase gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2658 YPK_2659 YPK_2659 YPK_2659 2925485 2926378 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2570 hypothetical protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2659 YPK_2660 YPK_2660 YPK_2660 2926741 2927493 - 3-deoxy-D-manno-octulosonate cytidylyltransferase TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase~PFAM: acylneuraminate cytidylyltransferase~KEGG: ypa:YPA_0694 putative 3-deoxy-manno-octulosonate cytidylyltransferase gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2660 YPK_2661 YPK_2661 YPK_2661 2927490 2927672 - protein of unknown function DUF343 PFAM: protein of unknown function DUF343~KEGG: ypi:YpsIP31758_2572 hypothetical protein gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2661 YPK_2662 YPK_2662 YPK_2662 2928220 2928429 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypi:YpsIP31758_2574 cold shock DNA-binding domain protein gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2662 YPK_2663 YPK_2663 YPK_2663 2929148 2930557 + protein of unknown function DUF1338 PFAM: protein of unknown function DUF1338~KEGG: ypp:YPDSF_2298 hypothetical protein gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2663 YPK_2664 YPK_2664 YPK_2664 2930565 2931551 - tetraacyldisaccharide 4'-kinase KEGG: ypa:YPA_0687 tetraacyldisaccharide 4'-kinase~TIGRFAM: tetraacyldisaccharide 4'-kinase~PFAM: Tetraacyldisaccharide-1-P 4'-kinase gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2664 YPK_2665 YPK_2665 YPK_2665 2931548 2933296 - lipid A ABC exporter%2C fused ATPase and inner membrane subunits MsbA KEGG: ypa:YPA_0686 transport ATP-binding protein~TIGRFAM: lipid A ABC exporter%2C fused ATPase and inner membrane subunits MsbA~PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2665 YPK_2666 YPK_2666 YPK_2666 2933332 2935623 - DNA internalization-related competence protein ComEC/Rec2 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2~PFAM: beta-lactamase domain protein%3B ComEC/Rec2-related protein~KEGG: yps:YPTB1419 putative DNA uptake protein ComEC/Rec2 gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2666 YPK_2667 YPK_2667 YPK_2667 2936156 2936440 - integration host factor%2C beta subunit TIGRFAM: integration host factor%2C beta subunit~PFAM: histone family protein DNA-binding protein~KEGG: ypi:YpsIP31758_2579 integration host factor%2C beta subunit gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2667 YPK_2668 YPK_2668 YPK_2668 2936501 2938174 - ribosomal protein S1 TIGRFAM: ribosomal protein S1~PFAM: RNA binding S1 domain protein~KEGG: ypi:YpsIP31758_2580 ribosomal protein S1 gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2668 YPK_2669 YPK_2669 YPK_2669 2938348 2939040 - cytidylate kinase KEGG: ypa:YPA_0682 cytidylate kinase~TIGRFAM: cytidylate kinase~PFAM: cytidylate kinase region gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2669 YPK_2670 YPK_2670 YPK_2670 2939353 2940639 - 3-phosphoshikimate 1-carboxyvinyltransferase TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~KEGG: ypi:YpsIP31758_2582 3-phosphoshikimate 1-carboxyvinyltransferase gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2670 YPK_2671 YPK_2671 YPK_2671 2940812 2941897 - phosphoserine aminotransferase KEGG: ypi:YpsIP31758_2583 phosphoserine aminotransferase~TIGRFAM: phosphoserine aminotransferase~PFAM: aminotransferase class V gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2671 YPK_2672 YPK_2672 YPK_2672 2942264 2944111 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2584 hypothetical protein gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2672 YPK_2673 YPK_2673 YPK_2673 2944132 2945226 - Haemagluttinin domain protein PFAM: Haemagluttinin domain protein~KEGG: ypi:YpsIP31758_2585 putative haemagglutinin/invasin gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2673 YPK_2674 YPK_2674 YPK_2674 2945545 2946582 - L-asparaginase%2C type II TIGRFAM: L-asparaginase%2C type II~PFAM: Asparaginase/glutaminase~KEGG: ypi:YpsIP31758_2586 L-asparaginase II gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2674 YPK_2675 YPK_2675 YPK_2675 2946731 2948497 + protein of unknown function DUF181 PFAM: protein of unknown function DUF181~KEGG: ypi:YpsIP31758_2587 hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2675 YPK_2676 YPK_2676 YPK_2676 2949194 2950051 + formate/nitrite transporter PFAM: formate/nitrite transporter~KEGG: ypa:YPA_0675 putative formate transporter 1 gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2676 YPK_2677 YPK_2677 YPK_2677 2950107 2952389 + formate acetyltransferase KEGG: ypi:YpsIP31758_2589 formate acetyltransferase~TIGRFAM: formate acetyltransferase~PFAM: formate C-acetyltransferase glycine radical%3B pyruvate formate-lyase PFL gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2677 YPK_2678 YPK_2678 YPK_2678 2952507 2953181 - glycosyl transferase family 25 PFAM: glycosyl transferase family 25~KEGG: ypi:YpsIP31758_2590 LPS glycosyltransferase family protein gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2678 YPK_2679 YPK_2679 YPK_2679 2954105 2954902 + pyruvate formate-lyase activating enzyme KEGG: ypm:YP_1212 pyruvate formate lyase activating enzyme 1~TIGRFAM: pyruvate formate-lyase activating enzyme~PFAM: Radical SAM domain protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2679 YPK_2680 YPK_2680 YPK_2680 2955056 2956204 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_1213 putative membrane protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2680 YPK_2681 YPK_2681 YPK_2681 2956443 2957735 - seryl-tRNA synthetase KEGG: ypi:YpsIP31758_2593 seryl-tRNA synthetase~TIGRFAM: seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl-tRNA synthetase%2C class IIa-like gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2681 YPK_2682 YPK_2682 YPK_2682 2957887 2958021 + hypothetical protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2682 YPK_2683 YPK_2683 YPK_2683 2957977 2959311 - AAA ATPase central domain protein PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~KEGG: ypa:YPA_0668 putative ATPase protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2683 YPK_2684 YPK_2684 YPK_2684 2959331 2959939 - outer membrane lipoprotein carrier protein LolA PFAM: outer membrane lipoprotein carrier protein LolA~KEGG: ypi:YpsIP31758_2595 outer membrane lipoprotein carrier protein LolA gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2684 YPK_2685 YPK_2685 YPK_2685 2960129 2964061 - cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: yps:YPTB1401 putative cell division protein gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2685 YPK_2686 YPK_2686 YPK_2686 2964184 2964678 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: ypi:YpsIP31758_2597 leucine-responsive regulatory protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2686 YPK_2687 YPK_2687 YPK_2687 2965446 2966408 + thioredoxin reductase TIGRFAM: thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ypa:YPA_0664 thioredoxin reductase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2687 YPK_2688 YPK_2688 YPK_2688 2966867 2968633 + ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydD KEGG: yps:YPTB1398 putative ABC cytochrome efflux transporter%2C fused ATP-binding and permease domains~TIGRFAM: ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydD~PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2688 YPK_2689 YPK_2689 YPK_2689 2968636 2970360 + ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydC KEGG: ypa:YPA_0662 transport ATP-binding protein~TIGRFAM: ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydC~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2689 YPK_2690 YPK_2690 YPK_2690 2970579 2971289 + Leucyltransferase PFAM: leucyl/phenylalanyl-tRNA--protein transferase~KEGG: ypm:YP_1222 putative leucyl/phenylalanyl-tRNA-protein transferase gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2690 YPK_2691 YPK_2691 YPK_2691 2971455 2971673 + translation initiation factor IF-1 TIGRFAM: translation initiation factor IF-1~PFAM: RNA binding S1 domain protein%3B S1 IF1 family protein~KEGG: spe:Spro_1675 translation initiation factor IF-1 gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2691 YPK_2692 YPK_2692 YPK_2692 2972071 2974347 - ATP-dependent Clp protease%2C ATP-binding subunit clpA KEGG: ypi:YpsIP31758_2606 ATP-dependent Clp protease%2C ATP-binding subunit ClpA~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit clpA~PFAM: AAA ATPase central domain protein%3B Clp domain protein%3B ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2692 YPK_2693 YPK_2693 YPK_2693 2974373 2974693 - ATP-dependent Clp protease adaptor protein ClpS PFAM: ATP-dependent Clp protease adaptor protein ClpS~KEGG: ypi:YpsIP31758_2607 ATP-dependent Clp protease adaptor protein ClpS gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2693 YPK_2694 YPK_2694 YPK_2694 2975054 2975317 + cold-shock DNA-binding domain protein KEGG: ypi:YpsIP31758_2609 cold shock domain protein CspD~TIGRFAM: cold shock domain protein CspD~PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2694 YPK_2695 YPK_2695 YPK_2695 2975598 2977547 - ABC transporter related PFAM: ABC transporter related%3B protein of unknown function DUF214~SMART: AAA ATPase~KEGG: ypa:YPA_0655 putative ABC transporter ATP-binding protein gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2695 YPK_2696 YPK_2696 YPK_2696 2977547 2978659 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: ypa:YPA_0654 putative HlyD family secretion protein gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2696 YPK_2697 YPK_2697 YPK_2697 2978896 2979843 + protein of unknown function DUF535 PFAM: protein of unknown function DUF535~KEGG: ypa:YPA_0652 putative virulence factor gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2697 YPK_2698 YPK_2698 YPK_2698 2979871 2979987 - hypothetical protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2698 YPK_2699 YPK_2699 YPK_2699 2979980 2981647 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2614 hypothetical protein gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2699 YPK_2700 YPK_2700 YPK_2700 2982000 2982896 + protein of unknown function DUF340 membrane PFAM: protein of unknown function DUF340 membrane~KEGG: ypa:YPA_0650 hypothetical protein gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2700 YPK_2701 YPK_2701 YPK_2701 2983096 2984748 + hybrid cluster protein TIGRFAM: hybrid cluster protein~PFAM: Prismane~KEGG: yps:YPTB1386 putative prismane protein homologue (hybrid cluster protein) gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2701 YPK_2702 YPK_2702 YPK_2702 2984862 2985884 + ferredoxin PFAM: ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypa:YPA_0648 putative oxidoreductase gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2702 YPK_2703 YPK_2703 YPK_2703 2986028 2987749 + thiamine pyrophosphate protein TPP binding domain protein PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: yps:YPTB1384 pyruvate dehydrogenase gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2703 YPK_2704 YPK_2704 YPK_2704 2988052 2988159 + conserved hypothetical protein KEGG: ypn:YPN_2624 hypothetical protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2704 YPK_2705 YPK_2705 YPK_2705 2988156 2989211 + Threonine aldolase PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: ypa:YPA_0645 L-allo-threonine aldolase gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2705 YPK_2706 YPK_2706 YPK_2706 2989208 2990698 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase~KEGG: ypi:YpsIP31758_2621 NAD dependent epimerase/dehydratase family protein gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2706 YPK_2707 YPK_2707 YPK_2707 2990798 2991805 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: ypi:YpsIP31758_2622 NAD-dependent epimerase/dehydratase family protein gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2707 YPK_2708 YPK_2708 YPK_2708 2991902 2992477 + putative lipoprotein KEGG: ypi:YpsIP31758_2623 putative lipoprotein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2708 YPK_2709 YPK_2709 YPK_2709 2992647 2993207 + chorismate mutase TIGRFAM: chorismate mutase~PFAM: Chorismate mutase~KEGG: ypi:YpsIP31758_2624 putative chorismate mutase gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2709 YPK_2710 YPK_2710 YPK_2710 2993451 2994230 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0639 arginine transport ATP-binding protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2710 YPK_2711 YPK_2711 YPK_2711 2994251 2994982 + cationic amino acid ABC transporter%2C periplasmic binding protein KEGG: ypa:YPA_0638 arginine-binding periplasmic protein 1 precursor~TIGRFAM: cationic amino acid ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 3~SMART: ionotropic glutamate receptor gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2711 YPK_2712 YPK_2712 YPK_2712 2994994 2995710 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0637 arginine transport system permease protein gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2712 YPK_2713 YPK_2713 YPK_2713 2995710 2996378 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2628 arginine ABC transporter%2C permease protein ArtM gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2713 YPK_2714 YPK_2714 YPK_2714 2996394 2996558 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2629 hypothetical protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2714 YPK_2715 YPK_2715 YPK_2715 2996583 2997428 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypm:YP_1248 permeases of the drug/metabolite transporter (DMT) superfamily gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2715 YPK_2716 YPK_2716 YPK_2716 2997425 2998795 - conserved hypothetical protein KEGG: yps:YPTB1373 hypothetical protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2716 YPK_2717 YPK_2717 YPK_2717 2998788 2999585 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2632 hypothetical protein gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2717 YPK_2718 YPK_2718 YPK_2718 2999573 3000358 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0631 putative transport ATP-binding protein gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2718 YPK_2719 YPK_2719 YPK_2719 3000355 3001413 - transport system permease protein PFAM: transport system permease protein~KEGG: yps:YPTB1370 putative FecCD ABC type transporter%2C permease protein gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2719 YPK_2720 YPK_2720 YPK_2720 3001413 3002504 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: yps:YPTB1369 putative periplasmic iron/siderophore binding protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2720 YPK_2721 YPK_2721 YPK_2721 3002938 3003864 - band 7 protein PFAM: band 7 protein~KEGG: ypi:YpsIP31758_2636 SPFH/band 7 family protein gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2721 YPK_2722 YPK_2722 YPK_2722 3004205 3004435 - conserved hypothetical protein KEGG: ypp:YPDSF_2358 hypothetical protein gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2722 YPK_2723 YPK_2723 YPK_2723 3004447 3004563 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2638 hypothetical protein gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2723 YPK_2724 YPK_2724 YPK_2724 3004683 3005414 + cationic amino acid ABC transporter%2C periplasmic binding protein KEGG: yps:YPTB1367 ABC transporter%2C periplasmic arginine binding protein ArtJ~TIGRFAM: cationic amino acid ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 3~SMART: ionotropic glutamate receptor gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2724 YPK_2725 YPK_2725 YPK_2725 3005541 3006671 - 23S rRNA (uracil-5-)-methyltransferase RumB TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB~PFAM: (Uracil-5)-methyltransferase~KEGG: ypi:YpsIP31758_2640 23S rRNA (uracil-5-)-methyltransferase RumB gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2725 YPK_2726 YPK_2726 YPK_2726 3006755 3007219 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2641 hypothetical protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2726 YPK_2727 YPK_2727 YPK_2727 3007344 3008189 - Ornithine carbamoyltransferase PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2642 putrescine ABC transporter%2C permease protein gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2727 YPK_2728 YPK_2728 YPK_2728 3008186 3009151 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2643 putrescine ABC transporter%2C permease protein gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2728 YPK_2729 YPK_2729 YPK_2729 3009176 3010309 - spermidine/putrescine ABC transporter ATPase subunit KEGG: ypa:YPA_0622 putrescine transport ATP-binding protein~TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2729 YPK_2730 YPK_2730 YPK_2730 3010480 3011589 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_2645 putrescine ABC transporter%2C periplasmic putrescine binding protein gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2730 YPK_2731 YPK_2731 YPK_2731 3012107 3012592 - conserved hypothetical protein KEGG: ypa:YPA_0620 hypothetical protein gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2731 YPK_2732 YPK_2732 YPK_2732 3012734 3013048 - protein of unknown function DUF1418 PFAM: protein of unknown function DUF1418~KEGG: ypa:YPA_0619 hypothetical protein gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2732 YPK_2733 YPK_2733 YPK_2733 3013511 3013774 + glutaredoxin%2C GrxA family TIGRFAM: glutaredoxin%2C GrxA family~PFAM: glutaredoxin~KEGG: ypa:YPA_0618 glutaredoxin 1 gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2733 YPK_2734 YPK_2734 YPK_2734 3014184 3015872 + YidE/YbjL duplication TIGRFAM: YidE/YbjL duplication~PFAM: TrkA-C domain protein%3B YidE/YbjL duplication domain protein~KEGG: ypa:YPA_0617 TrkA%2C potassium channel-family protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2734 YPK_2735 YPK_2735 YPK_2735 3016205 3017020 + membrane protein KEGG: ypn:YPN_2654 membrane protein gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2735 YPK_2736 YPK_2736 YPK_2736 3017020 3017625 + Undecaprenyl-diphosphatase PFAM: phosphoesterase PA-phosphatase related~KEGG: ypi:YpsIP31758_2651 PAP2 family protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2736 YPK_2737 YPK_2737 YPK_2737 3017883 3018554 + deoxyribose-phosphate aldolase KEGG: yps:YPTB1354 deoxyribose-phosphate aldolase~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2737 YPK_2738 YPK_2738 YPK_2738 3018784 3019548 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~KEGG: ypi:YpsIP31758_2653 transcriptional regulator%2C DeoR family gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2738 YPK_2739 YPK_2739 YPK_2739 3020635 3021936 + serine transporter TIGRFAM: serine transporter~PFAM: Amino acid transporter transmembrane~KEGG: ypi:YpsIP31758_2656 serine transporter gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2739 YPK_2740 YPK_2740 YPK_2740 3022410 3023615 - Serine-type D-Ala-D-Ala carboxypeptidase PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein~KEGG: yps:YPTB1351 D-alanyl-D-alanine carboxypeptidase gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2740 YPK_2741 YPK_2741 YPK_2741 3023950 3024621 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_1036 putative ABC transport integral membrane subunit gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2741 YPK_2742 YPK_2742 YPK_2742 3024618 3025604 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_1035 putative ABC transport ATP-binding subunit gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2742 YPK_2743 YPK_2743 YPK_2743 3025601 3026425 - NLPA lipoprotein PFAM: NLPA lipoprotein~KEGG: ypi:YpsIP31758_2662 lipoprotein%2C NlpA family gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2743 YPK_2744 YPK_2744 YPK_2744 3026584 3027651 - 2OG-Fe(II) oxygenase PFAM: 2OG-Fe(II) oxygenase~KEGG: ypi:YpsIP31758_2663 oxidoreductase%2C 2OG-Fe(II) oxygenase family gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2744 YPK_2745 YPK_2745 YPK_2745 3027614 3027736 - conserved hypothetical protein KEGG: ypk:y2869 hypothetical protein gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2745 YPK_2746 YPK_2746 YPK_2746 3028138 3028800 + HAD-superfamily subfamily IB hydrolase%2C TIGR01490 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)%3B HAD-superfamily subfamily IB hydrolase%2C TIGR01490~KEGG: ypi:YpsIP31758_2664 HAD-superfamily hydrolase%2C subfamily IB%2C TIGR01490 gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2746 YPK_2747 YPK_2747 YPK_2747 3028933 3029553 + Glutathione S-transferase domain PFAM: Glutathione S-transferase domain~KEGG: ypi:YpsIP31758_2665 putative glutathione S-transferase gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2747 YPK_2748 YPK_2748 YPK_2748 3029701 3031698 - TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypi:YpsIP31758_2666 TonB-dependent receptor gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2748 YPK_2749 YPK_2749 YPK_2749 3031958 3032746 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2667 ABC transporter%2C iron chelate uptake transporter (FeCT) family%2C ATP-binding protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2749 YPK_2750 YPK_2750 YPK_2750 3032743 3033825 - transport system permease protein PFAM: transport system permease protein~KEGG: ypa:YPA_1028 putative FecCD-family membrane transport protein gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2750 YPK_2751 YPK_2751 YPK_2751 3034000 3035169 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypi:YpsIP31758_2669 putative ABC transporter%2C periplasmic iron siderophore/cobalamin-binding protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2751 YPK_2752 YPK_2752 YPK_2752 3035431 3036942 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypa:YPA_1026 putative lysine-specific permease gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2752 YPK_2753 YPK_2753 YPK_2753 3037052 3037198 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2671 hypothetical protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2753 YPK_2754 YPK_2754 YPK_2754 3037200 3038072 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypa:YPA_1025 putative LysR-family transcriptional regulatory protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2754 YPK_2755 YPK_2755 YPK_2755 3038730 3039818 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypa:YPA_1024 hypothetical protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2755 YPK_2756 YPK_2756 YPK_2756 3039982 3040839 + apurinic endonuclease Apn1 KEGG: yps:YPTB1337 endonuclease IV~TIGRFAM: apurinic endonuclease Apn1~PFAM: Xylose isomerase domain protein TIM barrel~SMART: AP endonuclease family 2 gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2756 YPK_2757 YPK_2757 YPK_2757 3040926 3043397 - fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: ypa:YPA_1022 outer membrane usher protein PsaC precursor gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2757 YPK_2758 YPK_2758 YPK_2758 3043481 3044302 - pili assembly chaperone PFAM: pili assembly chaperone~KEGG: ypi:YpsIP31758_2677 gram-negative pili assembly chaperone gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2758 YPK_2759 YPK_2759 YPK_2759 3044429 3044905 - pH 6 antigen precursor (antigen 4) (adhesin) KEGG: yps:YPTB1334 pH 6 antigen precursor (antigen 4) (adhesin) gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2759 YPK_2760 YPK_2760 YPK_2760 3045450 3045938 - conserved hypothetical protein KEGG: yps:YPTB1333 hypothetical protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2760 YPK_2761 YPK_2761 YPK_2761 3045935 3046579 - transcriptional regulator%2C CadC PFAM: transcriptional regulator domain protein~KEGG: ypi:YpsIP31758_2680 transcriptional regulator gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2761 YPK_2762 YPK_2762 YPK_2762 3046904 3048604 - PTS system%2C fructose subfamily%2C IIC subunit TIGRFAM: PTS system%2C fructose-specific%2C IIB subunnit%3B PTS system%2C fructose subfamily%2C IIC subunit~PFAM: phosphotransferase system EIIC%3B phosphotransferase system PTS fructose-specific IIB subunit~KEGG: yps:YPTB1331 PTS system%2C fructose-specific IIBC component gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2762 YPK_2763 YPK_2763 YPK_2763 3048619 3049557 - 1-phosphofructokinase KEGG: ypa:YPA_1016 1-phosphofructokinase~TIGRFAM: 1-phosphofructokinase~PFAM: PfkB domain protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2763 YPK_2764 YPK_2764 YPK_2764 3049554 3050687 - phosphocarrier%2C HPr family TIGRFAM: phosphocarrier%2C HPr family~PFAM: phosphocarrier HPr protein%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~KEGG: ypi:YpsIP31758_2683 phosphocarrier%2C HPr family gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2764 YPK_2765 YPK_2765 YPK_2765 3050949 3051404 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: yps:YPTB1328 putative Mut family protein gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2765 YPK_2766 YPK_2766 YPK_2766 3051537 3052535 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypa:YPA_1013 putative ABC transport integral membrane subunit gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2766 YPK_2767 YPK_2767 YPK_2767 3052571 3054145 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_1012 putative ABC transport ATP-binding subunit gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2767 YPK_2768 YPK_2768 YPK_2768 3054254 3055342 - ABC transporter%2C periplasmic sugar-binding protein KEGG: yps:YPTB1325 ABC transporter%2C periplasmic sugar-binding protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2768 YPK_2769 YPK_2769 YPK_2769 3055514 3056224 - ribose 5-phosphate isomerase KEGG: ypa:YPA_1010 putative ribose 5-phosphate isomerase~TIGRFAM: ribose 5-phosphate isomerase~PFAM: Ribose 5-phosphate isomerase gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2769 YPK_2770 YPK_2770 YPK_2770 3056244 3057779 - xylulokinase TIGRFAM: xylulokinase~PFAM: carbohydrate kinase FGGY~KEGG: ypa:YPA_1009 putative carbohydrate kinase gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2770 YPK_2771 YPK_2771 YPK_2771 3057783 3059279 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase_~KEGG: ypi:YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2771 YPK_2772 YPK_2772 YPK_2772 3059631 3060773 + conserved hypothetical protein KEGG: ypp:YPDSF_2407 hypothetical protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2772 YPK_2773 YPK_2773 YPK_2773 3060785 3061735 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: ypi:YpsIP31758_2694 D-isomer specific 2-hydroxyacid dehydrogenase family protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2773 YPK_2774 YPK_2774 YPK_2774 3061746 3062561 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: yps:YPTB1319 putative short chain oxidoreductase gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2774 YPK_2775 YPK_2775 YPK_2775 3062630 3062884 - protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: ypa:YPA_1002 hypothetical protein gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2775 YPK_2776 YPK_2776 YPK_2776 3063260 3064504 + aromatic amino acid transporter TIGRFAM: aromatic amino acid transporter~PFAM: aromatic amino acid permease%3B Amino acid transporter transmembrane~KEGG: ypa:YPA_1001 putative tryptophan-specific transport protein gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2776 YPK_2777 YPK_2777 YPK_2777 3064608 3065180 + elongation factor P-like protein YeiP TIGRFAM: elongation factor P-like protein YeiP~PFAM: Elongation factor P/YeiP protein%3B Elongation factor KOW domain protein%3B Elongation factor P~KEGG: ypi:YpsIP31758_2698 elongation factor P-like protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2777 YPK_2778 YPK_2778 YPK_2778 3065320 3066513 - mannonate dehydratase KEGG: ypp:YPDSF_2413 mannonate dehydratase~TIGRFAM: mannonate dehydratase~PFAM: Mannonate dehydratase%3B Xylose isomerase domain protein TIM barrel gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2778 YPK_2779 YPK_2779 YPK_2779 3067079 3068551 + Mannitol dehydrogenase domain PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~KEGG: ypi:YpsIP31758_2702 mannitol dehydrogenase family protein gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2779 YPK_2780 YPK_2780 YPK_2780 3068680 3069423 - GntR domain protein PFAM: regulatory protein GntR HTH%3B GntR domain protein~KEGG: ypi:YpsIP31758_2703 uxu operon transcriptional regulator gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2780 YPK_2781 YPK_2781 YPK_2781 3069589 3069915 - conserved hypothetical protein KEGG: yps:YPTB1312 hypothetical protein gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2781 YPK_2782 YPK_2782 YPK_2782 3070231 3071214 + cobalamin synthesis protein P47K PFAM: cobalamin synthesis protein P47K~KEGG: ypi:YpsIP31758_2705 CobW/P47K family protein gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2782 YPK_2783 YPK_2783 YPK_2783 3071273 3071974 + phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~KEGG: ypi:YpsIP31758_2706 PAP2 family protein gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2783 YPK_2784 YPK_2784 YPK_2784 3072416 3073000 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: ypi:YpsIP31758_2707 lipoprotein%2C NlpC/P60 family gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2784 YPK_2785 YPK_2785 YPK_2785 3073586 3075166 + diguanylate phosphodiesterase PFAM: EAL domain protein~KEGG: ypi:YpsIP31758_2710 protein rtn gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2785 YPK_2786 YPK_2786 YPK_2786 3075248 3077056 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: yps:YPTB1307 putative ABC transporter%2C oligo-dipeptide/nickel binding protein gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2786 YPK_2787 YPK_2787 YPK_2787 3077066 3078166 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0990 putative ABC transporter integral membrane subunit gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2787 YPK_2788 YPK_2788 YPK_2788 3078166 3079194 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2713 ABC transporter%2C permease protein gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2788 YPK_2789 YPK_2789 YPK_2789 3079196 3080788 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2714 ABC transporter%2C ATP-binding protein gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2789 YPK_2790 YPK_2790 YPK_2790 3080849 3081193 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2715 hypothetical protein gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2790 YPK_2791 YPK_2791 YPK_2791 3082066 3082215 + hypothetical protein gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2791 YPK_2792 YPK_2792 YPK_2792 3082190 3083395 - drug resistance transporter%2C Bcr/CflA subfamily TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2717 bicyclomycin resistance protein gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2792 YPK_2793 YPK_2793 YPK_2793 3083499 3084206 - pseudouridine synthase PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase~KEGG: ypi:YpsIP31758_2718 ribosomal small subunit pseudouridine synthase A gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2793 YPK_2794 YPK_2794 YPK_2794 3084740 3086497 + type III restriction protein res subunit PFAM: helicase domain protein%3B type III restriction protein res subunit%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_2719 putative helicase gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2794 YPK_2795 YPK_2795 YPK_2795 3086659 3086943 + ribosomal protein L25 PFAM: ribosomal protein L25~KEGG: ypi:YpsIP31758_2720 ribosomal protein L25 gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2795 YPK_2796 YPK_2796 YPK_2796 3087031 3088035 - 37kDa nucleoid-associated protein PFAM: 37kDa nucleoid-associated protein~KEGG: ypi:YpsIP31758_2721 nucleoid-associated protein NdpA gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2796 YPK_2797 YPK_2797 YPK_2797 3088213 3088440 + protein of unknown function DUF1414 PFAM: protein of unknown function DUF1414~KEGG: yen:YE1420 hypothetical protein gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2797 YPK_2798 YPK_2798 YPK_2798 3088468 3090264 + sulfatase PFAM: sulfatase~KEGG: ypi:YpsIP31758_2723 sulfatase family protein gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2798 YPK_2800 YPK_2800 YPK_2800 3091235 3092311 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0047 hypothetical protein gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2800 YPK_2801 YPK_2801 YPK_2801 3092313 3092570 + conserved hypothetical protein KEGG: yps:YPTB1293 hypothetical protein gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2801 YPK_2802 YPK_2802 YPK_2802 3092599 3092883 + Colicin D PFAM: Colicin D~KEGG: yps:YPTB1292 hypothetical protein gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2802 YPK_2803 YPK_2803 YPK_2803 3093040 3093132 + conserved hypothetical protein KEGG: ypp:YPDSF_2438 hypothetical protein gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2803 YPK_2804 YPK_2804 YPK_2804 3093468 3093830 + conserved hypothetical protein KEGG: yps:YPTB1291 hypothetical protein gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2804 YPK_2805 YPK_2805 YPK_2805 3093956 3095392 - glycoside hydrolase family 1 PFAM: glycoside hydrolase family 1~KEGG: yps:YPTB1290 6-phospho-beta-glucosidase gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2805 YPK_2806 YPK_2806 YPK_2806 3095389 3095514 - hypothetical protein gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2806 YPK_2807 YPK_2807 YPK_2807 3095683 3096423 - transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: yps:YPTB1289 putative LacI-family regulatory protein gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2807 YPK_2808 YPK_2808 YPK_2808 3096882 3097301 - tail assembly chaperone gp38 PFAM: tail assembly chaperone gp38~KEGG: yps:YPTB1288 putative tail fiber assembly protein P37 gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2808 YPK_2809 YPK_2809 YPK_2809 3097303 3098019 - putative bacteriophage tail fiber protein KEGG: yps:YPTB1287 putative bacteriophage tail fiber protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2809 YPK_2810 YPK_2810 YPK_2810 3098116 3098718 - putative bacteriophage protein GP48 KEGG: yps:YPTB1286 putative bacteriophage protein GP48 gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2810 YPK_2811 YPK_2811 YPK_2811 3098715 3099851 - Baseplate J family protein PFAM: Baseplate J family protein~KEGG: ypi:YpsIP31758_2733 baseplate J-like protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2811 YPK_2812 YPK_2812 YPK_2812 3099855 3100310 - GP46 family protein PFAM: GP46 family protein~KEGG: yps:YPTB1284 putative bacteriophage protein GP46 gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2812 YPK_2813 YPK_2813 YPK_2813 3100307 3100903 - phage baseplate assembly protein V TIGRFAM: phage baseplate assembly protein V~PFAM: Mu Gp45 domain protein~KEGG: ypi:YpsIP31758_2735 phage baseplate assembly protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2813 YPK_2814 YPK_2814 YPK_2814 3100919 3101974 - Mu P family protein PFAM: Mu P family protein~KEGG: ypp:YPDSF_2447 bacteriophage tail protein gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2814 YPK_2815 YPK_2815 YPK_2815 3101971 3103377 - DNA circulation family protein PFAM: DNA circulation family protein~KEGG: ypi:YpsIP31758_2737 putative DNA circulation protein gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2815 YPK_2816 YPK_2816 YPK_2816 3103644 3105137 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2738 hypothetical protein gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2816 YPK_2817 YPK_2817 YPK_2817 3105258 3105557 - putative bacteriophage protein KEGG: yps:YPTB1279 putative bacteriophage protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2817 YPK_2818 YPK_2818 YPK_2818 3105559 3105927 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2740 hypothetical protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2818 YPK_2819 YPK_2819 YPK_2819 3105949 3107457 - Mu tail sheath family protein PFAM: Mu tail sheath family protein~KEGG: ypi:YpsIP31758_2741 bacteriophage Mu tail sheath protein (GpL) gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2819 YPK_2820 YPK_2820 YPK_2820 3107454 3107648 - putative bacteriophage protein KEGG: yps:YPTB1276 putative bacteriophage protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2820 YPK_2821 YPK_2821 YPK_2821 3107653 3108270 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2743 hypothetical protein gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2821 YPK_2822 YPK_2822 YPK_2822 3108316 3108606 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2744 hypothetical protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2822 YPK_2823 YPK_2823 YPK_2823 3109271 3110065 - Hydroxypyruvate isomerase PFAM: Xylose isomerase domain protein TIM barrel~KEGG: ypi:YpsIP31758_2745 AP endonuclease%2C family 2 gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2823 YPK_2824 YPK_2824 YPK_2824 3110041 3110853 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~KEGG: yps:YPTB1272 putative transcriptional regulatory protein gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2824 YPK_2825 YPK_2825 YPK_2825 3110856 3111587 - class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: ypp:YPDSF_2459 class II aldolase-family protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2825 YPK_2826 YPK_2826 YPK_2826 3111584 3112888 - type III effector Hrp-dependent outers PFAM: type III effector Hrp-dependent outers~KEGG: yps:YPTB1270 hypothetical protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2826 YPK_2827 YPK_2827 YPK_2827 3113099 3113578 - antitermination Q family protein PFAM: antitermination Q family protein~KEGG: ypi:YpsIP31758_2749 phage antitermination protein Q gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2827 YPK_2828 YPK_2828 YPK_2828 3113749 3113889 + hypothetical protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2828 YPK_2829 YPK_2829 YPK_2829 3113852 3114574 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B peptidase S24 and S26 domain protein~KEGG: ypi:YpsIP31758_2750 phage repressor protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2829 YPK_2830 YPK_2830 YPK_2830 3114780 3115022 + DinI family protein PFAM: DinI family protein~KEGG: ypi:YpsIP31758_2751 DinI family protein gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2830 YPK_2831 YPK_2831 YPK_2831 3115194 3116129 + Plasminogen activator Pla PFAM: peptidase A26 omptin~KEGG: ypa:YPA_0944 putative outer membrane-associated protease gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2831 YPK_2832 YPK_2832 YPK_2832 3116101 3116262 - hypothetical protein gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2832 YPK_2833 YPK_2833 YPK_2833 3116566 3118353 + methyl-accepting chemotaxis sensory transducer with Cache sensor PFAM: histidine kinase HAMP region domain protein%3B Cache domain protein%3B chemotaxis sensory transducer~KEGG: ypa:YPA_0943 putative methyl-accepting chemotaxis protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2833 YPK_2834 YPK_2834 YPK_2834 3118427 3119416 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: ypi:YpsIP31758_2754 metallo-beta-lactamase family protein gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2834 YPK_2835 YPK_2835 YPK_2835 3119832 3121358 + putative transport protein KEGG: ypi:YpsIP31758_2756 putative transport protein gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2835 YPK_2836 YPK_2836 YPK_2836 3121633 3122799 + beta-lactamase PFAM: beta-lactamase~KEGG: ypa:YPA_0939 putative penicillin-binding protein gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2836 YPK_2837 YPK_2837 YPK_2837 3123426 3123887 - protein of unknown function DUF1348 PFAM: protein of unknown function DUF1348~KEGG: ypi:YpsIP31758_2759 hypothetical protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2837 YPK_2838 YPK_2838 YPK_2838 3124035 3124643 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypi:YpsIP31758_2760 transcriptional regulator%2C TetR family gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2838 YPK_2839 YPK_2839 YPK_2839 3124680 3125795 - porin Gram-negative type PFAM: porin Gram-negative type~KEGG: ypa:YPA_0936 outer membrane protein C%2C porin gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2839 YPK_2840 YPK_2840 YPK_2840 3125992 3126126 - hypothetical protein gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2840 YPK_2841 YPK_2841 YPK_2841 3126899 3128053 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2762 transporter%2C major facilitator family gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2841 YPK_2842 YPK_2842 YPK_2842 3128077 3130770 + multi-sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B Hpt domain protein~KEGG: yps:YPTB1259 putative two-component sensor protein like yojN gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2842 YPK_2843 YPK_2843 YPK_2843 3130773 3131426 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~KEGG: ypi:YpsIP31758_2764 capsular synthesis regulator component B gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2843 YPK_2844 YPK_2844 YPK_2844 3131494 3134367 - integral membrane sensor hybrid histidine kinase PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase~KEGG: yps:YPTB1257 two component sensor kinase/response regulator protein RcsC gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2844 YPK_2845 YPK_2845 YPK_2845 3134427 3134552 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2766 hypothetical protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2845 YPK_2846 YPK_2846 YPK_2846 3134555 3137248 - DNA gyrase%2C A subunit KEGG: ypi:YpsIP31758_2767 DNA gyrase%2C A subunit~TIGRFAM: DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2846 YPK_2847 YPK_2847 YPK_2847 3137548 3138276 + ubiquinone biosynthesis O-methyltransferase KEGG: ypi:YpsIP31758_2768 3-demethylubiquinone-9 3-methyltransferase~TIGRFAM: ubiquinone biosynthesis O-methyltransferase~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase%3B Methyltransferase type 11%3B Methyltransferase type 12 gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2847 YPK_2848 YPK_2848 YPK_2848 3138770 3141058 + ribonucleoside-diphosphate reductase%2C alpha subunit KEGG: ypi:YpsIP31758_2769 ribonucleoside-diphosphate reductase%2C alpha subunit~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit~PFAM: ribonucleotide reductase large subunit%3B ATP-cone domain protein%3B Ribonucleotide reductase large subunit domain protein gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2848 YPK_2849 YPK_2849 YPK_2849 3141220 3142350 + Ribonucleoside-diphosphate reductase PFAM: ribonucleotide reductase~KEGG: ypi:YpsIP31758_2770 ribonucleoside-diphosphate reductase%2C beta subunit gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2849 YPK_2850 YPK_2850 YPK_2850 3142354 3142611 + ferredoxin PFAM: ferredoxin~KEGG: ypi:YpsIP31758_2771 iron-sulfur cluster-binding protein gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2850 YPK_2851 YPK_2851 YPK_2851 3142646 3143155 + proteinase inhibitor I11 ecotin PFAM: proteinase inhibitor I11 ecotin~KEGG: ypa:YPA_0925 putative ecotin precursor gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2851 YPK_2852 YPK_2852 YPK_2852 3143213 3144406 - competence/damage-inducible protein CinA TIGRFAM: molybdenum cofactor synthesis domain protein%3B competence/damage-inducible protein CinA~PFAM: molybdopterin binding domain~KEGG: yps:YPTB1250 competence/damage-inducible protein CinA gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2852 YPK_2853 YPK_2853 YPK_2853 3145025 3146233 + aromatic amino acid transporter TIGRFAM: aromatic amino acid transporter~PFAM: aromatic amino acid permease%3B Amino acid transporter transmembrane~KEGG: ypa:YPA_0923 tyrosine-specific transport protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2853 YPK_2854 YPK_2854 YPK_2854 3146490 3147032 - YfaZ family protein PFAM: YfaZ family protein~KEGG: ypa:YPA_0922 hypothetical protein gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2854 YPK_2855 YPK_2855 YPK_2855 3147393 3148832 + Catalase PFAM: Catalase domain protein~KEGG: yps:YPTB1246 catalase gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2855 YPK_2856 YPK_2856 YPK_2856 3148900 3151080 - helicase c2 SMART: Helicase-like%2C DEXD box c2 type%3B helicase c2%3B DEAD-like helicases~KEGG: ypi:YpsIP31758_2777 ATP-dependent helicase DinG gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2856 YPK_2857 YPK_2857 YPK_2857 3151350 3152465 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: yps:YPTB1244 general bacterial porin (GBP) family protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2857 YPK_2858 YPK_2858 YPK_2858 3152877 3153767 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypi:YpsIP31758_2779 integral membrane protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2858 YPK_2859 YPK_2859 YPK_2859 3153892 3154110 + conserved hypothetical protein KEGG: yps:YPTB1242 hypothetical protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2859 YPK_2860 YPK_2860 YPK_2860 3154228 3156534 - Lysine decarboxylase PFAM: Orn/Lys/Arg decarboxylase major region%3B Orn/Lys/Arg decarboxylase domain protein~KEGG: ypi:YpsIP31758_2781 biodegradative arginine decarboxylase gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2860 YPK_2861 YPK_2861 YPK_2861 3156604 3157938 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypi:YpsIP31758_2782 arginine/agmatine antiporter gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2861 YPK_2862 YPK_2862 YPK_2862 3158392 3159228 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0911 putative ABC transport integral membrane subunit gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2862 YPK_2863 YPK_2863 YPK_2863 3159225 3160163 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0910 putative ABC transport ATP-binding subunit gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2863 YPK_2864 YPK_2864 YPK_2864 3160160 3161314 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0909 putative ABC transport integral membrane subunit gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2864 YPK_2865 YPK_2865 YPK_2865 3161575 3162507 - Substrate-binding region of ABC-type glycine betaine transport system PFAM: Substrate-binding region of ABC-type glycine betaine transport system~KEGG: ypi:YpsIP31758_2786 quaternary amine uptake ABC transporter (QAT) family%2C substrate-binding protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2865 YPK_2866 YPK_2866 YPK_2866 3163243 3164097 + Rhodanese domain protein PFAM: Rhodanese domain protein~KEGG: ypa:YPA_0906 putative sulfurtransferase gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2866 YPK_2867 YPK_2867 YPK_2867 3164245 3165660 - Aromatic-L-amino-acid decarboxylase PFAM: Pyridoxal-dependent decarboxylase~KEGG: ypi:YpsIP31758_2788 aromatic amino acid decarboxylase gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2867 YPK_2868 YPK_2868 YPK_2868 3165684 3166541 - conserved hypothetical protein KEGG: ypp:YPDSF_2503 hypothetical protein gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2868 YPK_2869 YPK_2869 YPK_2869 3166656 3167354 - urea ABC transporter%2C ATP-binding protein UrtE KEGG: ypi:YpsIP31758_2790 hydrophobic amino acid ABC transporter (HAAT) family%2C ATP-binding protein~TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtE~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2869 YPK_2870 YPK_2870 YPK_2870 3167448 3168284 - urea ABC transporter%2C ATP-binding protein UrtD TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtD~PFAM: ABC transporter related~KEGG: yps:YPTB1231 ABC branch chain aa transporter%2C ATP-binding subunit gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2870 YPK_2871 YPK_2871 YPK_2871 3168281 3169357 - urea ABC transporter%2C permease protein UrtC TIGRFAM: urea ABC transporter%2C permease protein UrtC~PFAM: inner-membrane translocator~KEGG: ypa:YPA_0901 putative branched-chain amino acid transport system%2C permease component gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2871 YPK_2872 YPK_2872 YPK_2872 3169357 3170958 - urea ABC transporter%2C permease protein UrtB TIGRFAM: urea ABC transporter%2C permease protein UrtB~PFAM: inner-membrane translocator~KEGG: ypa:YPA_0900 putative branched-chain amino acid transport system%2C permease component gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2872 YPK_2873 YPK_2873 YPK_2873 3171082 3172350 - urea ABC transporter%2C urea binding protein TIGRFAM: urea ABC transporter%2C urea binding protein~KEGG: ypa:YPA_0899 putative substrate-binding periplasmic transport protein gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2873 YPK_2874 YPK_2874 YPK_2874 3172819 3173292 - protein of unknown function DUF1456 PFAM: protein of unknown function DUF1456~KEGG: ypi:YpsIP31758_2795 hypothetical protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2874 YPK_2875 YPK_2875 YPK_2875 3173537 3174418 - phosphonate ABC transporter%2C inner membrane subunit TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2796 phosphonate ABC transporter%2C permease protein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2875 YPK_2876 YPK_2876 YPK_2876 3174421 3175281 - phosphonate ABC transporter%2C inner membrane subunit TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0896 putative ABC transport membrane permease gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2876 YPK_2877 YPK_2877 YPK_2877 3175384 3176313 - phosphonate ABC transporter%2C periplasmic phosphonate binding protein TIGRFAM: phosphonate ABC transporter%2C periplasmic phosphonate-binding protein%3B phosphonate ABC transporter%2C periplasmic phosphonate binding protein~KEGG: ypi:YpsIP31758_2798 phosphonate ABC transporter%2C periplasmic phosphonate-binding protein gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2877 YPK_2878 YPK_2878 YPK_2878 3176350 3177186 - phosphonate ABC transporter%2C ATPase subunit KEGG: ypa:YPA_0894 putative ABC transport ATP-binding subunit~TIGRFAM: phosphonate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2878 YPK_2879 YPK_2879 YPK_2879 3177394 3177642 - Transglycosylase-associated protein PFAM: Transglycosylase-associated protein~KEGG: ypa:YPA_0893 hypothetical protein gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2879 YPK_2880 YPK_2880 YPK_2880 3177827 3178930 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2801 hypothetical protein gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2880 YPK_2881 YPK_2881 YPK_2881 3179243 3179584 + HNH endonuclease PFAM: HNH endonuclease~SMART: HNH nuclease~KEGG: ypi:YpsIP31758_2803 HNH endonuclease domain protein gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2881 YPK_2882 YPK_2882 YPK_2882 3179610 3180149 - adenylate cyclase%2C class IV pseudogene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2882 YPK_2884 YPK_2884 YPK_2884 3180359 3182071 + D-lactate dehydrogenase PFAM: FAD linked oxidase domain protein%3B D-lactate dehydrogenase membrane binding~KEGG: ypp:YPDSF_2519 D-lactate dehydrogenase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2884 YPK_2885 YPK_2885 YPK_2885 3182192 3183163 - peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1~KEGG: ypp:YPDSF_2520 penicillin-binding protein 7 precursor gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2885 YPK_2886 YPK_2886 YPK_2886 3183467 3183646 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2807 hypothetical protein gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2886 YPK_2887 YPK_2887 YPK_2887 3183720 3184664 - dihydrouridine synthase DuS PFAM: dihydrouridine synthase DuS~KEGG: yps:YPTB1216 putative tRNA-dihydrouridine synthase C gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2887 YPK_2888 YPK_2888 YPK_2888 3184958 3185887 - conserved hypothetical protein KEGG: yps:YPTB1215 hypothetical protein gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2888 YPK_2889 YPK_2889 YPK_2889 3186303 3186761 - transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2889 YPK_2890 YPK_2890 YPK_2890 3186751 3186906 - conserved hypothetical protein KEGG: ypp:YPDSF_2525 hypothetical protein gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2890 YPK_2891 YPK_2891 YPK_2891 3186972 3187976 - helicase domain protein PFAM: helicase domain protein~KEGG: ypn:YPN_2806 helicase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2891 YPK_2892 YPK_2892 YPK_2892 3188633 3188947 - conserved hypothetical protein KEGG: ypa:YPA_1100 hypothetical protein gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2892 YPK_2893 YPK_2893 YPK_2893 3189031 3189198 - hypothetical protein gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2893 YPK_2894 YPK_2894 YPK_2894 3189321 3189656 - hypothetical protein KEGG: mtu:Rv0578c PE-PGRS family protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2894 YPK_2895 YPK_2895 YPK_2895 3189690 3189857 - conserved hypothetical protein KEGG: ypm:YP_0971 hypothetical protein gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2895 YPK_2896 YPK_2896 YPK_2896 3190431 3190664 - transposase KEGG: ypn:YPN_2812 transposase gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2896 YPK_2897 YPK_2897 YPK_2897 3190720 3190980 - conserved hypothetical protein KEGG: ypa:YPA_1096 hypothetical protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2897 YPK_2898 YPK_2898 YPK_2898 3191110 3192465 - DEAD/DEAH box helicase domain protein PFAM: helicase domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_2810 ATP-dependent RNA helicase%2C DEAD/DEAH box family gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2898 YPK_2899 YPK_2899 YPK_2899 3192856 3193566 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Transcriptional regulator TetR~KEGG: ypa:YPA_1094 putative TetR family transcriptional regulator gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2899 YPK_2900 YPK_2900 YPK_2900 3193618 3194604 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: ypi:YpsIP31758_2812 transport protein%2C MFP family gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2900 YPK_2901 YPK_2901 YPK_2901 3194618 3196360 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2813 ABC transporter%2C ATP-binding protein gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2901 YPK_2902 YPK_2902 YPK_2902 3196365 3197540 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ypm:YP_0977 ABC-type multidrug transport system%2C permease component gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2902 YPK_2903 YPK_2903 YPK_2903 3197553 3198659 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ypa:YPA_1090 ABC transporter multidrug efflux pump%2C permease subunit gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2903 YPK_2904 YPK_2904 YPK_2904 3198698 3199024 - Ethyl tert-butyl ether degradation EthD PFAM: Ethyl tert-butyl ether degradation EthD~KEGG: ypi:YpsIP31758_2816 hypothetical protein gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2904 YPK_2905 YPK_2905 YPK_2905 3199594 3200505 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypa:YPA_1087 putative transcriptional regulator%2C LysR family gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2905 YPK_2906 YPK_2906 YPK_2906 3200506 3201615 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: ypi:YpsIP31758_2819 oxidoreductase%2C FAD/FMN-binding gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2906 YPK_2907 YPK_2907 YPK_2907 3201963 3203327 - two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family PFAM: response regulator receiver%3B sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: yps:YPTB1205 transcriptional regulatory protein hydG gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2907 YPK_2908 YPK_2908 YPK_2908 3203314 3205128 - signal transduction histidine kinase%2C nitrogen specific%2C NtrB KEGG: yps:YPTB1204 possible 2-component histidine kinase-sensor~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2908 YPK_2909 YPK_2909 YPK_2909 3205486 3205959 + conserved hypothetical protein KEGG: ypn:YPN_2826 hypothetical protein gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2909 YPK_2910 YPK_2910 YPK_2910 3206047 3207303 - nucleoside transporter TIGRFAM: nucleoside transporter~PFAM: nucleoside:H symporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_2823 xanthosine transporter XapB gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2910 YPK_2911 YPK_2911 YPK_2911 3207442 3208305 - xanthosine phosphorylase TIGRFAM: xanthosine phosphorylase%3B inosine guanosine and xanthosine phosphorylase family~PFAM: purine phosphorylase family 2~KEGG: ypi:YpsIP31758_2824 xanthosine phosphorylase gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2911 YPK_2912 YPK_2912 YPK_2912 3208618 3209499 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: yps:YPTB1200 possible drug/metabolite efflux pump (DMT superfamily) gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2912 YPK_2913 YPK_2913 YPK_2913 3209537 3210430 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: yps:YPTB1199 putative LysR-family regulatory protein gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2913 YPK_2914 YPK_2914 YPK_2914 3210662 3212710 - choline/carnitine/betaine transporter TIGRFAM: choline/carnitine/betaine transporter~PFAM: BCCT transporter~KEGG: yps:YPTB1198 high-affinity choline transport protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2914 YPK_2915 YPK_2915 YPK_2915 3213130 3213672 + transcriptional regulator%2C TetR family TIGRFAM: transcriptional repressor BetI~PFAM: regulatory protein TetR~KEGG: ypa:YPA_1075 TetR-family regulatory protein gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2915 YPK_2916 YPK_2916 YPK_2916 3213730 3215202 + betaine aldehyde dehydrogenase TIGRFAM: betaine aldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase_~KEGG: ypa:YPA_1074 betaine aldehyde dehydrogenase gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2916 YPK_2917 YPK_2917 YPK_2917 3215225 3216928 + choline dehydrogenase TIGRFAM: choline dehydrogenase~PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: ypi:YpsIP31758_2831 choline dehydrogenase gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2917 YPK_2918 YPK_2918 YPK_2918 3217139 3217849 - protein of unknown function UPF0005 PFAM: protein of unknown function UPF0005~KEGG: ypi:YpsIP31758_2832 hypothetical protein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2918 YPK_2919 YPK_2919 YPK_2919 3217992 3218447 - molybdopterin biosynthesis MoaE protein PFAM: molybdopterin biosynthesis MoaE protein~KEGG: ypi:YpsIP31758_2833 molybdopterin converting factor%2C subunit 2 gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2919 YPK_2920 YPK_2920 YPK_2920 3218447 3218692 - molybdopterin converting factor%2C subunit 1 TIGRFAM: molybdopterin converting factor%2C subunit 1~PFAM: thiamineS protein~KEGG: ypi:YpsIP31758_2834 molybdopterin converting factor%2C subunit 1 gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2920 YPK_2921 YPK_2921 YPK_2921 3218689 3219168 - molybdenum cofactor biosynthesis protein C TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis MoaC region~KEGG: ypi:YpsIP31758_2835 molybdenum cofactor biosynthesis protein C gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2921 YPK_2922 YPK_2922 YPK_2922 3219511 3220491 - molybdenum cofactor biosynthesis protein A KEGG: ypi:YpsIP31758_2836 molybdenum cofactor biosynthesis protein A~TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: Radical SAM domain protein%3B molybdenum cofactor synthesis domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2922 YPK_2923 YPK_2923 YPK_2923 3220743 3220889 + hypothetical protein gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2923 YPK_2924 YPK_2924 YPK_2924 3221023 3221946 + protein of unknown function UPF0052 and CofD PFAM: protein of unknown function UPF0052 and CofD~KEGG: ypa:YPA_1065 hypothetical protein gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2924 YPK_2925 YPK_2925 YPK_2925 3222077 3222322 - conserved hypothetical protein KEGG: yps:YPTB1188 hypothetical protein gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2925 YPK_2926 YPK_2926 YPK_2926 3222614 3224629 - excinuclease ABC%2C B subunit KEGG: ypi:YpsIP31758_2839 UvrABC system%2C B protein~TIGRFAM: excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B UvrB/UvrC protein~SMART: DEAD-like helicases gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2926 YPK_2927 YPK_2927 YPK_2927 3225720 3226430 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_1062 putative amino acid transporter gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2927 YPK_2928 YPK_2928 YPK_2928 3226620 3227357 - dethiobiotin synthase KEGG: ypm:YP_1006 dethiobiotin synthetase~TIGRFAM: dethiobiotin synthase~PFAM: Cobyrinic acid ac-diamide synthase gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2928 YPK_2929 YPK_2929 YPK_2929 3227335 3228138 - biotin biosynthesis protein BioC TIGRFAM: biotin biosynthesis protein BioC~PFAM: UbiE/COQ5 methyltransferase%3B protein of unknown function DUF691 methyltransferase-related%3B Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypa:YPA_1060 biotin synthesis protein BioC gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2929 YPK_2930 YPK_2930 YPK_2930 3228122 3229273 - 8-amino-7-oxononanoate synthase KEGG: ypi:YpsIP31758_2843 8-amino-7-oxononanoate synthase~TIGRFAM: 8-amino-7-oxononanoate synthase~PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase%3B aminotransferase class I and II gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2930 YPK_2931 YPK_2931 YPK_2931 3229273 3230310 - biotin synthase KEGG: ypa:YPA_1058 biotin synthase~TIGRFAM: biotin synthase~PFAM: Radical SAM domain protein%3B biotin and thiamin synthesis associated~SMART: Elongator protein 3/MiaB/NifB gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2931 YPK_2932 YPK_2932 YPK_2932 3230409 3231689 + adenosylmethionine-8-amino-7-oxononanoate aminotransferase TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase~PFAM: aminotransferase class-III~KEGG: ypa:YPA_1057 adenosylmethionine-8-amino-7-oxononanoate aminotransferase gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2932 YPK_2933 YPK_2933 YPK_2933 3231875 3232879 - 6-phosphogluconolactonase KEGG: yps:YPTB1180 hypothetical protein gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2933 YPK_2934 YPK_2934 YPK_2934 3233170 3233991 + Cof-like hydrolase TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase%3B Haloacid dehalogenase domain protein hydrolase type 3~KEGG: yps:YPTB1179 hypothetical protein gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2934 YPK_2935 YPK_2935 YPK_2935 3234047 3235126 - molybdate ABC transporter%2C ATPase subunit KEGG: ypa:YPA_1054 molybdenum transport ATP-binding protein ModC~TIGRFAM: molybdate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B TOBE domain protein~SMART: AAA ATPase gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2935 YPK_2936 YPK_2936 YPK_2936 3235120 3235815 - molybdate ABC transporter%2C inner membrane subunit TIGRFAM: molybdate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_1053 molybdenum transport system permease protein ModB gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2936 YPK_2937 YPK_2937 YPK_2937 3235815 3236594 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: ypa:YPA_1052 molybdate-binding periplasmic protein precursor gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2937 YPK_2938 YPK_2938 YPK_2938 3236829 3236981 - conserved hypothetical protein KEGG: ypa:YPA_1051 hypothetical protein gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2938 YPK_2939 YPK_2939 YPK_2939 3237283 3238074 + transcriptional regulator%2C ModE family TIGRFAM: molybdate transport repressor%2C ModE~PFAM: regulatory protein LysR%3B TOBE domain protein~KEGG: ypa:YPA_1050 molybdenum transport protein ModE gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2939 YPK_2940 YPK_2940 YPK_2940 3238184 3239674 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB1173 ABC molybdenum transporter%2C ATP-binding subunit modF gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2940 YPK_2941 YPK_2941 YPK_2941 3239708 3239836 + hypothetical protein gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2941 YPK_2942 YPK_2942 YPK_2942 3239891 3240709 + Abortive infection protein PFAM: Abortive infection protein~KEGG: ypa:YPA_1048 hypothetical protein gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2942 YPK_2943 YPK_2943 YPK_2943 3241069 3242085 + UDP-glucose 4-epimerase TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: ypm:YP_1020 UDP-glucose 4-epimerase gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2943 YPK_2944 YPK_2944 YPK_2944 3242095 3243147 + galactose-1-phosphate uridylyltransferase KEGG: ypi:YpsIP31758_2856 galactose-1-phosphate uridylyltransferase~TIGRFAM: galactose-1-phosphate uridylyltransferase~PFAM: galactose-1-phosphate uridyl transferase domain protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2944 YPK_2945 YPK_2945 YPK_2945 3243144 3244295 + galactokinase TIGRFAM: galactokinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~KEGG: ypi:YpsIP31758_2857 galactokinase gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2945 YPK_2946 YPK_2946 YPK_2946 3244289 3245359 + galactose mutarotase KEGG: ypi:YpsIP31758_2858 galactose mutarotase~TIGRFAM: galactose mutarotase~PFAM: Aldose 1-epimerase gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2946 YPK_2947 YPK_2947 YPK_2947 3245652 3245987 + PsiF repeat protein PFAM: PsiF repeat protein~KEGG: ypi:YpsIP31758_2859 phosphate starvation-inducible protein PsiF gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2947 YPK_2948 YPK_2948 YPK_2948 3246334 3247086 + phosphoglycerate mutase 1 family TIGRFAM: phosphoglycerate mutase 1 family~PFAM: Phosphoglycerate mutase~KEGG: ypa:YPA_1041 phosphoglycerate mutase 1 gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2948 YPK_2949 YPK_2949 YPK_2949 3247268 3248320 - phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: ypm:YP_1026 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2949 YPK_2950 YPK_2950 YPK_2950 3248610 3248735 - hypothetical protein gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2950 YPK_2951 YPK_2951 YPK_2951 3248787 3249725 + cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: ypa:YPA_0607 putative cation transport protein gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2951 YPK_2952 YPK_2952 YPK_2952 3249846 3250571 - nicotinamide mononucleotide transporter PnuC TIGRFAM: nicotinamide mononucleotide transporter PnuC~PFAM: Nicotinamide mononucleotide transporter PnuC~KEGG: ypi:YpsIP31758_2864 nicotinamide mononucleotide transporter PnuC gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2952 YPK_2953 YPK_2953 YPK_2953 3250693 3251754 - quinolinate synthetase complex%2C A subunit KEGG: ypi:YpsIP31758_2865 quinolinate synthetase complex%2C A subunit~TIGRFAM: quinolinate synthetase complex%2C A subunit~PFAM: Quinolinate synthetase A gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2953 YPK_2954 YPK_2954 YPK_2954 3252963 3253772 - tol-pal system protein YbgF TIGRFAM: tol-pal system protein YbgF~PFAM: Tetratricopeptide TPR_2 repeat protein~KEGG: ypi:YpsIP31758_2866 tol-pal system protein YbgF gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2954 YPK_2955 YPK_2955 YPK_2955 3253782 3254288 - peptidoglycan-associated lipoprotein TIGRFAM: peptidoglycan-associated lipoprotein~PFAM: OmpA/MotB domain protein~KEGG: ypi:YpsIP31758_2867 peptidoglycan-associated lipoprotein gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2955 YPK_2956 YPK_2956 YPK_2956 3254339 3255631 - Tol-Pal system beta propeller repeat protein TolB TIGRFAM: Tol-Pal system beta propeller repeat protein TolB~PFAM: TolB domain protein%3B WD40 domain protein beta Propeller~KEGG: ypa:YPA_0602 TolB colicin import protein gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2956 YPK_2957 YPK_2957 YPK_2957 3255751 3256932 - protein TolA TIGRFAM: protein TolA~PFAM: Tol-Pal system TolA~KEGG: ypn:YPN_2875 TolA colicin import membrane protein gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2957 YPK_2958 YPK_2958 YPK_2958 3257029 3257457 - protein TolR TIGRFAM: protein TolR~PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ypa:YPA_0600 TolR colicin import membrane protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2958 YPK_2959 YPK_2959 YPK_2959 3257470 3258147 - protein TolQ TIGRFAM: protein TolQ~PFAM: MotA/TolQ/ExbB proton channel~KEGG: ypi:YpsIP31758_2871 protein TolQ gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2959 YPK_2960 YPK_2960 YPK_2960 3258156 3258557 - tol-pal system-associated acyl-CoA thioesterase TIGRFAM: tol-pal system-associated acyl-CoA thioesterase~PFAM: thioesterase superfamily protein~KEGG: ypa:YPA_0598 hypothetical protein gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2960 YPK_2961 YPK_2961 YPK_2961 3258689 3259021 - cyd operon protein YbgE TIGRFAM: cyd operon protein YbgE~PFAM: Cyd operon protein YbgE~KEGG: ypp:YPDSF_2577 hypothetical protein gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2961 YPK_2962 YPK_2962 YPK_2962 3258966 3259100 - cyd operon protein YbgT TIGRFAM: cyd operon protein YbgT~PFAM: membrane bound YbgT family protein~KEGG: ypi:YpsIP31758_2874 cyd operon protein YbgT gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2962 YPK_2963 YPK_2963 YPK_2963 3259113 3260252 - cytochrome d ubiquinol oxidase%2C subunit II KEGG: ypi:YpsIP31758_2875 cytochrome d ubiquinol oxidase%2C subunit II~TIGRFAM: cytochrome d ubiquinol oxidase%2C subunit II~PFAM: cytochrome bd ubiquinol oxidase subunit II gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2963 YPK_2964 YPK_2964 YPK_2964 3260267 3261835 - cytochrome bd ubiquinol oxidase subunit I PFAM: cytochrome bd ubiquinol oxidase subunit I~KEGG: ypa:YPA_0595 cytochrome d ubiquinol oxidase subunit I gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2964 YPK_2965 YPK_2965 YPK_2965 3262603 3263475 - succinyl-CoA synthetase%2C alpha subunit TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: CoA-binding domain protein%3B ATP-citrate lyase/succinyl-CoA ligase~KEGG: ypi:YpsIP31758_2878 succinyl-CoA synthetase%2C alpha subunit gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2965 YPK_2966 YPK_2966 YPK_2966 3263475 3264641 - succinyl-CoA synthetase%2C beta subunit KEGG: ypi:YpsIP31758_2879 succinyl-CoA synthetase%2C beta subunit~TIGRFAM: succinyl-CoA synthetase%2C beta subunit~PFAM: ATP-citrate lyase/succinyl-CoA ligase%3B ATP-grasp domain protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2966 YPK_2967 YPK_2967 YPK_2967 3264754 3265977 - 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase TIGRFAM: 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~PFAM: biotin/lipoyl attachment domain-containing protein%3B catalytic domain of components of various dehydrogenase complexes%3B E3 binding domain protein~KEGG: ypa:YPA_0592 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2967 YPK_2968 YPK_2968 YPK_2968 3266007 3268814 - 2-oxoglutarate dehydrogenase%2C E1 subunit KEGG: ypi:YpsIP31758_2881 2-oxoglutarate dehydrogenase%2C E1 component~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 subunit~PFAM: dehydrogenase E1 component%3B Transketolase central region gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2968 YPK_2969 YPK_2969 YPK_2969 3269170 3269886 - succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~KEGG: ypi:YpsIP31758_2882 succinate dehydrogenase%2C iron-sulfur protein gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2969 YPK_2970 YPK_2970 YPK_2970 3269936 3271702 - succinate dehydrogenase%2C flavoprotein subunit KEGG: ypi:YpsIP31758_2883 succinate dehydrogenase%2C flavoprotein subunit~TIGRFAM: succinate dehydrogenase%2C flavoprotein subunit%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2970 YPK_2971 YPK_2971 YPK_2971 3271703 3272050 - succinate dehydrogenase%2C hydrophobic membrane anchor protein TIGRFAM: succinate dehydrogenase%2C hydrophobic membrane anchor protein~KEGG: ypa:YPA_0588 succinate dehydrogenase hydrophobic membrane anchor protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2971 YPK_2972 YPK_2972 YPK_2972 3272044 3272433 - succinate dehydrogenase%2C cytochrome b556 subunit TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit~PFAM: succinate dehydrogenase cytochrome b subunit~KEGG: yps:YPTB1143 succinate dehydrogenase cytochrome b-556 subunit gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2972 YPK_2973 YPK_2973 YPK_2973 3273143 3274423 + citrate synthase I KEGG: ypi:YpsIP31758_2886 citrate synthase I~TIGRFAM: citrate synthase I~PFAM: Citrate synthase gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2973 YPK_2974 YPK_2974 YPK_2974 3274531 3275109 - GrpE protein PFAM: GrpE protein~KEGG: ypi:YpsIP31758_2887 co-chaperone GrpE gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2974 YPK_2975 YPK_2975 YPK_2975 3275347 3276114 + ATP-NAD/AcoX kinase PFAM: ATP-NAD/AcoX kinase~KEGG: ypa:YPA_0584 hypothetical protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2975 YPK_2976 YPK_2976 YPK_2976 3276201 3277862 + DNA repair protein RecN TIGRFAM: DNA repair protein RecN~PFAM: SMC domain protein~KEGG: ypp:YPDSF_2592 DNA repair protein RecN gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2976 YPK_2977 YPK_2977 YPK_2977 3277976 3278317 + SmpA/OmlA domain protein PFAM: SmpA/OmlA domain protein~KEGG: yps:YPTB1138 conserved hypothetical small protein A precursor gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2977 YPK_2978 YPK_2978 YPK_2978 3278467 3278751 - protein of unknown function UPF0125 PFAM: protein of unknown function UPF0125~KEGG: yps:YPTB1137 hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2978 YPK_2979 YPK_2979 YPK_2979 3278744 3279178 - cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: yps:YPTB1136 hypothetical protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2979 YPK_2980 YPK_2980 YPK_2980 3279327 3279821 + SsrA-binding protein TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~KEGG: ypp:YPDSF_2596 SsrA-binding protein (small protein B) gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2980 YPK_2981 YPK_2981 YPK_2981 3280416 3280946 + phage integrase family protein KEGG: ypi:YpsIP31758_2895 phage integrase family protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2981 YPK_2982 YPK_2982 YPK_2982 3280995 3281258 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ypi:YpsIP31758_2896 transposase gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2982 YPK_2983 YPK_2983 YPK_2983 3281341 3281526 + integrase KEGG: ypn:YPN_1124 integrase gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2983 YPK_2984 YPK_2984 YPK_2984 3281689 3281940 - conserved hypothetical protein KEGG: ypm:YP_1076 hypothetical protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2984 YPK_2985 YPK_2985 YPK_2985 3282207 3282335 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2897 hypothetical protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2985 YPK_2986 YPK_2986 YPK_2986 3282651 3283418 + alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold%3B PGAP1 family protein~KEGG: ypm:YP_1077 predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2986 YPK_2987 YPK_2987 YPK_2987 3283468 3283575 + hypothetical protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2987 YPK_2988 YPK_2988 YPK_2988 3283562 3283738 + hypothetical protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2988 YPK_2989 YPK_2989 YPK_2989 3283750 3284037 + CopG domain protein DNA-binding domain protein PFAM: CopG domain protein DNA-binding domain protein~KEGG: ypi:YpsIP31758_2899 transcriptional regulator%2C CopG family gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2989 YPK_2990 YPK_2990 YPK_2990 3284454 3284981 + flavodoxin TIGRFAM: flavodoxin~PFAM: flavodoxin/nitric oxide synthase~KEGG: ypm:YP_1080 flavodoxin 1 gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2990 YPK_2991 YPK_2991 YPK_2991 3285348 3285794 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: ypi:YpsIP31758_2902 ferric uptake regulation protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2991 YPK_2992 YPK_2992 YPK_2992 3286235 3288910 - Beta-N-acetylhexosaminidase PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein%3B glycoside hydrolase family 20 domain protein%3B Beta-N-acetylhexosaminidase-like%3B Glycoside hydrolase%2C family 20%2C catalytic core~KEGG: ypi:YpsIP31758_2903 chitobiase gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2992 YPK_2993 YPK_2993 YPK_2993 3289238 3290659 - outer membrane porin PFAM: outer membrane porin~KEGG: yps:YPTB1122 possible outermembrane porin (OPR family) gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2993 YPK_2994 YPK_2994 YPK_2994 3291365 3293032 - glutaminyl-tRNA synthetase TIGRFAM: glutaminyl-tRNA synthetase~PFAM: glutamyl-tRNA synthetase class Ic~KEGG: ypi:YpsIP31758_2907 glutaminyl-tRNA synthetase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2994 YPK_2995 YPK_2995 YPK_2995 3293235 3293693 - transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2995 YPK_2996 YPK_2996 YPK_2996 3293958 3295991 - PTS system%2C N-acetylglucosamine-specific IIBC subunit TIGRFAM: PTS system%2C glucose subfamily%2C IIA subunit%3B PTS system%2C N-acetylglucosamine-specific IIBC subunit%3B PTS system%2C glucose-like IIB subunint~PFAM: sugar-specific permease EIIA 1 domain%3B phosphotransferase system PTS EIIB protein%3B phosphotransferase system EIIC~KEGG: yps:YPTB1120 PTS system%2C N-acetylglucosamine-specific IIABC component gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2996 YPK_2997 YPK_2997 YPK_2997 3296390 3297190 + glucosamine-6-phosphate isomerase TIGRFAM: glucosamine-6-phosphate isomerase~PFAM: glucosamine/galactosamine-6-phosphate isomerase~KEGG: yps:YPTB1119 putative glucosamine-6-phosphate isomerase gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2997 YPK_2998 YPK_2998 YPK_2998 3297210 3298355 + N-acetylglucosamine-6-phosphate deacetylase KEGG: ypm:YP_1087 putative N-acetylglucosamine-6-phosphate deacetylase~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase~PFAM: amidohydrolase gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2998 YPK_2999 YPK_2999 YPK_2999 3298372 3299598 + ROK family protein PFAM: ROK family protein~KEGG: ypk:y1200 transcriptional repressor of nag (N-acetylglucosamine) operon gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_2999 YPK_3000 YPK_3000 YPK_3000 3299671 3300423 + HAD-superfamily hydrolase%2C subfamily IIA TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypk:y1199 N-acetylglucosamine metabolism protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3000 YPK_3001 YPK_3001 YPK_3001 3300778 3302442 + asparagine synthase (glutamine-hydrolyzing) KEGG: ypi:YpsIP31758_2913 asparagine synthase B%2C glutamine-hydrolyzing~TIGRFAM: asparagine synthase (glutamine-hydrolyzing)~PFAM: glutamine amidotransferase class-II%3B asparagine synthase gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3001 YPK_3002 YPK_3002 YPK_3002 3302491 3302628 - conserved hypothetical protein KEGG: ype:YPO2622 hypothetical protein gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3002 YPK_3004 YPK_3004 YPK_3004 3303926 3305107 - Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family TIGRFAM: Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family~PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: ypp:YPDSF_2631 putative 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3004 YPK_3005 YPK_3005 YPK_3005 3305244 3306773 + tRNA-i(6)A37 thiotransferase enzyme MiaB KEGG: ypm:YP_1093 putative tRNA-thiotransferase~TIGRFAM: RNA modification enzyme%2C MiaB family%3B tRNA-i(6)A37 thiotransferase enzyme MiaB~PFAM: deoxyribonuclease/rho motif-related TRAM%3B Radical SAM domain protein%3B Protein of unknown function UPF0004~SMART: Elongator protein 3/MiaB/NifB gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3005 YPK_3006 YPK_3006 YPK_3006 3307101 3308174 + PhoH family protein PFAM: PhoH family protein~KEGG: ypm:YP_1094 phosphate starvation-inducible protein PhoH%2C predicted ATPase gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3006 YPK_3007 YPK_3007 YPK_3007 3308171 3308644 + protein of unknown function UPF0054 PFAM: protein of unknown function UPF0054~KEGG: ypi:YpsIP31758_2917 conserved hypothetical protein TIGR00043 gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3007 YPK_3008 YPK_3008 YPK_3008 3308762 3309640 + transporter-associated region PFAM: CBS domain containing protein%3B transporter-associated region~KEGG: ypi:YpsIP31758_2918 magnesium and cobalt efflux protein CorC gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3008 YPK_3009 YPK_3009 YPK_3009 3309648 3311195 + apolipoprotein N-acyltransferase TIGRFAM: apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: ypm:YP_1097 apolipoprotein N-acyltransferase gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3009 YPK_3010 YPK_3010 YPK_3010 3311976 3312893 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~KEGG: ypi:YpsIP31758_2920 glutamate/aspartate ABC transporter%2C periplasmic glutamate/aspartate-binding protein gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3010 YPK_3011 YPK_3011 YPK_3011 3313067 3313807 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_2921 glutamate/aspartate ABC transporter%2C permease protein GltJ gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3011 YPK_3012 YPK_3012 YPK_3012 3313807 3314481 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_1100 putative glutamate/aspartate transport system permease gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3012 YPK_3013 YPK_3013 YPK_3013 3314481 3315206 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypk:y1186 ATP-binding protein of glutamate/aspartate transport system gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3013 YPK_3014 YPK_3014 YPK_3014 3315340 3315822 - protein of unknown function DUF1451 PFAM: protein of unknown function DUF1451~KEGG: ypi:YpsIP31758_2924 hypothetical protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3014 YPK_3015 YPK_3015 YPK_3015 3316084 3318666 + leucyl-tRNA synthetase TIGRFAM: leucyl-tRNA synthetase~KEGG: ypm:YP_1103 leucyl-tRNA synthetase gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3015 YPK_3016 YPK_3016 YPK_3016 3318681 3319304 + Rare lipoprotein B PFAM: Rare lipoprotein B~KEGG: ypi:YpsIP31758_2927 rare lipoprotein B gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3016 YPK_3017 YPK_3017 YPK_3017 3319301 3320335 + DNA polymerase III%2C delta subunit KEGG: ypi:YpsIP31758_2928 DNA polymerase III%2C delta subunit~TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III delta gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3017 YPK_3018 YPK_3018 YPK_3018 3320325 3320987 + nicotinate (nicotinamide) nucleotide adenylyltransferase KEGG: ypm:YP_1106 putative nicotinate-nucleotide adenylyltransferase~TIGRFAM: cytidyltransferase-related domain protein%3B nicotinate (nicotinamide) nucleotide adenylyltransferase~PFAM: cytidylyltransferase gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3018 YPK_3019 YPK_3019 YPK_3019 3321210 3321527 + iojap-like protein TIGRFAM: iojap-like protein~PFAM: Iojap-related protein~KEGG: ypi:YpsIP31758_2947 iojap-related protein gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3019 YPK_3020 YPK_3020 YPK_3020 3321531 3322001 + protein of unknown function DUF163 PFAM: protein of unknown function DUF163~KEGG: ypm:YP_1108 hypothetical protein gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3020 YPK_3021 YPK_3021 YPK_3021 3322083 3323978 + penicillin-binding protein 2 KEGG: ypn:YPN_1089 penicillin-binding protein 2~TIGRFAM: penicillin-binding protein 2~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3021 YPK_3022 YPK_3022 YPK_3022 3324164 3325276 + rod shape-determining protein RodA TIGRFAM: rod shape-determining protein RodA~PFAM: cell cycle protein~KEGG: ypm:YP_1110 rod shape-determining protein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3022 YPK_3023 YPK_3023 YPK_3023 3325286 3326368 + rare lipoprotein A TIGRFAM: rare lipoprotein A~PFAM: Rare lipoprotein A%3B Sporulation domain protein~KEGG: ypi:YpsIP31758_2951 rare lipoprotein A/sporulation and cell division repeat protein gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3023 YPK_3024 YPK_3024 YPK_3024 3326771 3327973 + Serine-type D-Ala-D-Ala carboxypeptidase PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein~KEGG: ypm:YP_1112 putative penicillin-binding protein 5 gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3024 YPK_3025 YPK_3025 YPK_3025 3328171 3328434 + protein of unknown function DUF493 PFAM: protein of unknown function DUF493~KEGG: ypi:YpsIP31758_2953 hypothetical protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3025 YPK_3026 YPK_3026 YPK_3026 3328646 3329347 + lipoate-protein ligase B TIGRFAM: lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase~KEGG: ypm:YP_1114 lipoate-protein ligase B gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3026 YPK_3027 YPK_3027 YPK_3027 3329540 3330505 + lipoic acid synthetase KEGG: ypi:YpsIP31758_2955 lipoic acid synthetase~TIGRFAM: lipoic acid synthetase~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3027 YPK_3028 YPK_3028 YPK_3028 3330686 3330943 - twin-arginine translocation protein%2C TatA/E family subunit TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106~KEGG: ypm:YP_1117 sec-independent protein translocase protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3028 YPK_3029 YPK_3029 YPK_3029 3330998 3331150 - conserved hypothetical protein KEGG: ypk:y1169 hypothetical protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3029 YPK_3030 YPK_3030 YPK_3030 3331510 3331893 + CrcB protein TIGRFAM: CrcB protein~PFAM: Camphor resistance CrcB protein~KEGG: ypi:YpsIP31758_2957 CrcB protein gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3030 YPK_3031 YPK_3031 YPK_3031 3332316 3332525 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ypm:YP_1120 putative cold shock protein gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3031 YPK_3032 YPK_3032 YPK_3032 3332804 3333283 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~KEGG: ypi:YpsIP31758_2959 cold-shock DNA-binding domain protein gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3032 YPK_3033 YPK_3033 YPK_3033 3333553 3334143 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~KEGG: ypi:YpsIP31758_2960 transcriptional regulator%2C LuxR family gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3033 YPK_3034 YPK_3034 YPK_3034 3334593 3335558 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2961 hypothetical protein gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3034 YPK_3035 YPK_3035 YPK_3035 3335937 3336131 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2963 hypothetical protein gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3035 YPK_3036 YPK_3036 YPK_3036 3336574 3336861 + Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: ypi:YpsIP31758_2964 antibiotic biosynthesis monooxygenase domain protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3036 YPK_3037 YPK_3037 YPK_3037 3336877 3338667 - ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_1127 putative ABC transport protein gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3037 YPK_3038 YPK_3038 YPK_3038 3338875 3339078 - conserved hypothetical protein KEGG: ypk:y1156 hypothetical protein gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3038 YPK_3039 YPK_3039 YPK_3039 3339237 3340052 - Myo-inositol catabolism IolB domain protein PFAM: Myo-inositol catabolism IolB domain protein~KEGG: ypi:YpsIP31758_2967 putative myo-inositol catabolism protein IolB gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3039 YPK_3040 YPK_3040 YPK_3040 3340062 3341168 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: ypp:YPDSF_2668 hypothetical protein gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3040 YPK_3041 YPK_3041 YPK_3041 3341189 3343159 - PfkB domain protein PFAM: PfkB domain protein~KEGG: yps:YPTB1078 putative carbohydrate kinase gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3041 YPK_3042 YPK_3042 YPK_3042 3343208 3344341 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: ypi:YpsIP31758_2970 oxidoreductase%2C Gfo/Idh/MocA family gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3042 YPK_3043 YPK_3043 YPK_3043 3344365 3345393 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypm:YP_1132 sugar transport system permease protein gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3043 YPK_3044 YPK_3044 YPK_3044 3345405 3346952 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_2972 ribose ABC transporter%2C ATP-binding protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3044 YPK_3045 YPK_3045 YPK_3045 3347001 3347930 - Monosaccharide-transporting ATPase PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_1134 putative sugar-binding periplasmic protein gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3045 YPK_3046 YPK_3046 YPK_3046 3348038 3349024 - Inositol 2-dehydrogenase PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: yps:YPTB1073 putative myo-inositol 2-dehydrogenase gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3046 YPK_3047 YPK_3047 YPK_3047 3349185 3349334 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2975 hypothetical protein gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3047 YPK_3048 YPK_3048 YPK_3048 3349318 3351264 - thiamine pyrophosphate protein domain protein TPP-binding PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: yps:YPTB1072 putative thiamine pyrophosphate-dependent protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3048 YPK_3049 YPK_3049 YPK_3049 3351278 3352804 - methylmalonate-semialdehyde dehydrogenase TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase_~KEGG: ypi:YpsIP31758_2977 methylmalonate-semialdehyde dehydrogenase gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3049 YPK_3050 YPK_3050 YPK_3050 3352924 3353046 - hypothetical protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3050 YPK_3051 YPK_3051 YPK_3051 3353162 3354016 + transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: yps:YPTB1070 hypothetical protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3051 YPK_3052 YPK_3052 YPK_3052 3354315 3354479 - hypothetical protein gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3052 YPK_3053 YPK_3053 YPK_3053 3354616 3360594 + alpha-2-macroglobulin domain protein PFAM: alpha-2-macroglobulin domain protein%3B alpha-2-macroglobulin domain protein 2~KEGG: ypp:YPDSF_2679 membrane protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3053 YPK_3054 YPK_3054 YPK_3054 3360651 3363014 + penicillin-binding protein 1C TIGRFAM: penicillin-binding protein 1C~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase%3B Penicillin-binding domain protein~KEGG: ypi:YpsIP31758_2980 penicillin-binding protein 1C gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3054 YPK_3055 YPK_3055 YPK_3055 3363227 3363472 - putative transcriptional regulator%2C Nlp KEGG: ypm:YP_1143 putative regulator gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3055 YPK_3056 YPK_3056 YPK_3056 3363577 3363687 + hypothetical protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3056 YPK_3057 YPK_3057 YPK_3057 3364145 3364987 + conserved hypothetical protein KEGG: yps:YPTB1066 hypothetical protein gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3057 YPK_3058 YPK_3058 YPK_3058 3364956 3365396 + protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: ypn:YPN_1051 hypothetical protein gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3058 YPK_3059 YPK_3059 YPK_3059 3365629 3366006 + protein of unknown function DUF1240 PFAM: protein of unknown function DUF1240~KEGG: yps:YPTB1065 hypothetical protein gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3059 YPK_3060 YPK_3060 YPK_3060 3366134 3366613 - type VI secretion system effector%2C Hcp1 family TIGRFAM: type VI secretion system effector%2C Hcp1 family~PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_2983 hypothetical protein gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3060 YPK_3061 YPK_3061 YPK_3061 3366637 3366888 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2984 hypothetical protein gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3061 YPK_3062 YPK_3062 YPK_3062 3366927 3367166 - conserved hypothetical protein KEGG: yps:YPTB1062 hypothetical protein gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3062 YPK_3063 YPK_3063 YPK_3063 3367695 3367814 + hypothetical protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3063 YPK_3064 YPK_3064 YPK_3064 3367976 3369892 + outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Pertactin%3B Autotransporter beta- domain protein~KEGG: ypi:YpsIP31758_2985 putative autotransporter protein gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3064 YPK_3065 YPK_3065 YPK_3065 3370427 3370992 + conserved hypothetical protein pseudogene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3065 YPK_3067 YPK_3067 YPK_3067 3371007 3372128 - Cupin 4 family protein PFAM: Cupin 4 family protein~SMART: transcription factor jumonji jmjC domain protein~KEGG: yps:YPTB1059 hypothetical protein gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3067 YPK_3068 YPK_3068 YPK_3068 3372558 3373766 - transposase mutator type PFAM: transposase mutator type~KEGG: yps:YPTB3311 putative transposase gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3068 YPK_3069 YPK_3069 YPK_3069 3373914 3374786 - pseudouridine synthase PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase~KEGG: yps:YPTB1058 pseudouridylate synthase gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3069 YPK_3070 YPK_3070 YPK_3070 3375186 3377393 + conserved hypothetical protein KEGG: yps:YPTB1057 hypothetical protein gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3070 YPK_3071 YPK_3071 YPK_3071 3377386 3377916 + conserved hypothetical protein KEGG: ypi:YpsIP31758_2993 hypothetical protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3071 YPK_3072 YPK_3072 YPK_3072 3378072 3380453 + glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: ypi:YpsIP31758_2994 glycosyl hydrolase%2C family 3 gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3072 YPK_3073 YPK_3073 YPK_3073 3380532 3382160 - conserved hypothetical protein KEGG: ypm:YP_1161 hypothetical protein gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3073 YPK_3074 YPK_3074 YPK_3074 3382317 3382442 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2997 hypothetical protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3074 YPK_3075 YPK_3075 YPK_3075 3382633 3383484 + 2%2C5-didehydrogluconate reductase PFAM: aldo/keto reductase~KEGG: ypi:YpsIP31758_2998 oxidoreductase%2C aldo/keto reductase family gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3075 YPK_3076 YPK_3076 YPK_3076 3383510 3384499 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ypm:YP_1163 putative aldo/keto reductase gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3076 YPK_3077 YPK_3077 YPK_3077 3384554 3385447 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_1164 putative LysR-family transcriptional regulatory protein gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3077 YPK_3078 YPK_3078 YPK_3078 3385750 3386055 - conserved hypothetical protein KEGG: yps:YPTB1050 hypothetical protein gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3078 YPK_3079 YPK_3079 YPK_3079 3386152 3386553 - Zn-dependent hydrolase of the beta-lactamase fold KEGG: ypm:YP_0869 predicted Zn-dependent hydrolase of the beta-lactamase fold gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3079 YPK_3080 YPK_3080 YPK_3080 3386535 3387854 - putative dual specificity phosphatase PFAM: phosphoesterase PA-phosphatase related%3B Dual specificity protein phosphatase~KEGG: ypi:YpsIP31758_3002 PAP2 family phosphatase gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3080 YPK_3081 YPK_3081 YPK_3081 3387847 3389610 - alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold~KEGG: ypi:YpsIP31758_3003 hypothetical protein gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3081 YPK_3082 YPK_3082 YPK_3082 3389607 3390239 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~KEGG: ypi:YpsIP31758_3004 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3082 YPK_3083 YPK_3083 YPK_3083 3390249 3391178 - phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: ypi:YpsIP31758_3005 phosphatidate cytidylyltransferase gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3083 YPK_3084 YPK_3084 YPK_3084 3391171 3391773 - CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: ypm:YP_0864 putative CDP-alcohol phosphatidyltransferase gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3084 YPK_3085 YPK_3085 YPK_3085 3392000 3392176 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3008 hypothetical protein gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3085 YPK_3086 YPK_3086 YPK_3086 3392173 3392418 - conserved hypothetical protein KEGG: ypm:YP_0862 hypothetical protein gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3086 YPK_3087 YPK_3087 YPK_3087 3393048 3393290 + conserved hypothetical protein KEGG: ypm:YP_0860 hypothetical protein gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3087 YPK_3088 YPK_3088 YPK_3088 3393275 3393922 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3011 hypothetical protein gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3088 YPK_3089 YPK_3089 YPK_3089 3394036 3394236 + conserved hypothetical protein KEGG: ypm:YP_0858 hypothetical protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3089 YPK_3090 YPK_3090 YPK_3090 3394653 3394811 + conserved hypothetical protein KEGG: ypm:YP_0856 hypothetical protein gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3090 YPK_3091 YPK_3091 YPK_3091 3394937 3395353 - tail assembly chaperone gp38 PFAM: tail assembly chaperone gp38~KEGG: yps:YPTB1820 putative phage tail fiber assembly protein gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3091 YPK_3092 YPK_3092 YPK_3092 3395350 3396768 - conserved hypothetical protein KEGG: yps:YPTB1819 hypothetical protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3092 YPK_3093 YPK_3093 YPK_3093 3396785 3397783 - conserved hypothetical protein KEGG: ypp:YPDSF_0999 hypothetical protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3093 YPK_3094 YPK_3094 YPK_3094 3397783 3398829 - Protein of unknown function DUF1983 PFAM: Protein of unknown function DUF1983~KEGG: ypp:YPDSF_1000 phage host specificity protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3094 YPK_3095 YPK_3095 YPK_3095 3399237 3399416 + hypothetical protein gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3095 YPK_3096 YPK_3096 YPK_3096 3399445 3399678 - hypothetical protein gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3096 YPK_3097 YPK_3097 YPK_3097 3399758 3400390 - conserved hypothetical protein KEGG: ypk:y2193 hypothetical protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3097 YPK_3098 YPK_3098 YPK_3098 3400651 3401361 - NLP/P60 protein PFAM: NLP/P60 protein~SMART: Mov34/MPN/PAD-1 family protein~KEGG: ypp:YPDSF_1006 phage minor tail protein gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3098 YPK_3099 YPK_3099 YPK_3099 3401364 3402116 - phage minor tail protein L TIGRFAM: phage minor tail protein L~PFAM: minor tail protein L~KEGG: ypk:y2195 phage tail protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3099 YPK_3100 YPK_3100 YPK_3100 3402133 3402474 - minor tail family protein PFAM: minor tail family protein~KEGG: yen:YE2312 hypothetical protein gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3100 YPK_3101 YPK_3101 YPK_3101 3402477 3402683 - hypothetical protein KEGG: ypp:YPDSF_1011 phage tail protein gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3101 YPK_3102 YPK_3102 YPK_3102 3402788 3403510 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B peptidase S24 and S26 domain protein~KEGG: sgl:SG1227 phage repressor gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3102 YPK_3103 YPK_3103 YPK_3103 3403647 3404069 + hypothetical protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3103 YPK_3104 YPK_3104 YPK_3104 3404134 3404880 + conserved hypothetical protein KEGG: maq:Maqu_0024 hypothetical protein gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3104 YPK_3105 YPK_3105 YPK_3105 3404877 3405458 + hypothetical protein KEGG: bxe:Bxe_A0368 predicted nucleic acid-binding protein%2C PIN domain-containing gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3105 YPK_3106 YPK_3106 YPK_3106 3405527 3405763 - hypothetical protein gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3106 YPK_3107 YPK_3107 YPK_3107 3406321 3406776 + conserved hypothetical integrase KEGG: ppr:PBPRA0877 hypothetical integrase gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3107 YPK_3108 YPK_3108 YPK_3108 3406850 3407092 + DinI family protein PFAM: DinI family protein~KEGG: yen:YE1408 putative stress response protein gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3108 YPK_3109 YPK_3109 YPK_3109 3407106 3407351 + DinI family protein PFAM: DinI family protein~KEGG: spe:Spro_1895 DinI family protein gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3109 YPK_3110 YPK_3110 YPK_3110 3407738 3408175 - tail assembly chaperone gp38 PFAM: tail assembly chaperone gp38~KEGG: yps:YPTB1820 putative phage tail fiber assembly protein gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3110 YPK_3111 YPK_3111 YPK_3111 3408185 3409276 - hypothetical protein KEGG: yps:YPTB1287 putative bacteriophage tail fiber protein gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3111 YPK_3112 YPK_3112 YPK_3112 3409327 3409923 - conserved hypothetical protein KEGG: ypi:YpsIP31758_2732 hypothetical protein gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3112 YPK_3113 YPK_3113 YPK_3113 3409920 3411056 - Baseplate J family protein PFAM: Baseplate J family protein~KEGG: ypi:YpsIP31758_2733 baseplate J-like protein gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3113 YPK_3114 YPK_3114 YPK_3114 3411060 3411497 - GP46 family protein PFAM: GP46 family protein~KEGG: yps:YPTB1284 putative bacteriophage protein GP46 gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3114 YPK_3115 YPK_3115 YPK_3115 3411494 3412087 - Mu Gp45 domain protein PFAM: Mu Gp45 domain protein~KEGG: ypi:YpsIP31758_2735 phage baseplate assembly protein gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3115 YPK_3116 YPK_3116 YPK_3116 3412087 3413157 - Mu P family protein PFAM: Mu P family protein~KEGG: ecx:EcHS_A2087 bacteriophage Mu P protein gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3116 YPK_3117 YPK_3117 YPK_3117 3413154 3414560 - DNA circulation family protein PFAM: DNA circulation family protein~KEGG: ypi:YpsIP31758_2737 putative DNA circulation protein gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3117 YPK_3118 YPK_3118 YPK_3118 3414637 3415167 - phage-related membrane protein KEGG: ypp:YPDSF_1002 phage-related membrane protein gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3118 YPK_3119 YPK_3119 YPK_3119 3415271 3417217 - hypothetical protein KEGG: ypi:YpsIP31758_2738 hypothetical protein gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3119 YPK_3120 YPK_3120 YPK_3120 3417340 3417639 - putative bacteriophage protein KEGG: yps:YPTB1279 putative bacteriophage protein gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3120 YPK_3121 YPK_3121 YPK_3121 3417641 3418015 - conserved hypothetical protein KEGG: ypa:YPA_0957 hypothetical protein gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3121 YPK_3122 YPK_3122 YPK_3122 3418028 3419461 - Mu tail sheath family protein PFAM: Mu tail sheath family protein~KEGG: yps:YPTB1277 putative bacteriophage tail sheath protein gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3122 YPK_3123 YPK_3123 YPK_3123 3419458 3419802 - conserved hypothetical protein KEGG: ecw:EcE24377A_1448 hypothetical protein gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3123 YPK_3124 YPK_3124 YPK_3124 3419802 3420194 - hypothetical protein gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3124 YPK_3125 YPK_3125 YPK_3125 3420196 3421242 - major capsid protein E PFAM: major capsid protein E~KEGG: gox:GOX2343 putative capsid protein of prophage gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3125 YPK_3126 YPK_3126 YPK_3126 3421352 3421807 - antitermination protein PFAM: antitermination protein~KEGG: stm:STM0903 putative chaparone gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3126 YPK_3127 YPK_3127 YPK_3127 3422017 3422262 + hypothetical protein gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3127 YPK_3128 YPK_3128 YPK_3128 3422433 3423587 + integrase family protein PFAM: integrase family protein~KEGG: ent:Ent638_0996 phage integrase family protein gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3128 YPK_3129 YPK_3129 YPK_3129 3423793 3424641 - conserved hypothetical protein KEGG: ent:Ent638_0478 hypothetical protein gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3129 YPK_3130 YPK_3130 YPK_3130 3425213 3425311 - hypothetical protein gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3130 YPK_3131 YPK_3131 YPK_3131 3425308 3425691 - protein of unknown function DUF1219 PFAM: protein of unknown function DUF1219~KEGG: yps:YPTB3866 hypothetical protein gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3131 YPK_3132 YPK_3132 YPK_3132 3425755 3426084 - YagBYeeUYfjZ family protein PFAM: YagBYeeUYfjZ family protein~KEGG: ent:Ent638_0476 YagBYeeUYfjZ family protein gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3132 YPK_3133 YPK_3133 YPK_3133 3426097 3426567 - DNA repair protein RadC PFAM: DNA repair protein RadC~KEGG: ent:Ent638_0474 DNA repair protein RadC gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3133 YPK_3134 YPK_3134 YPK_3134 3426638 3427459 - protein of unknown function DUF932 PFAM: protein of unknown function DUF932~KEGG: ecj:JW0242 conserved hypothetical protein gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3134 YPK_3135 YPK_3135 YPK_3135 3427548 3427886 - conserved hypothetical protein KEGG: eca:ECA2856 hypothetical protein gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3135 YPK_3136 YPK_3136 YPK_3136 3427907 3428371 - conserved hypothetical protein KEGG: spe:Spro_1776 hypothetical protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3136 YPK_3137 YPK_3137 YPK_3137 3428872 3429759 - GTP-binding protein HSR1-related PFAM: GTP-binding protein HSR1-related~KEGG: eca:ECA2860 hypothetical protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3137 YPK_3138 YPK_3138 YPK_3138 3429851 3431233 - hypothetical protein KEGG: eca:ECA2861 hypothetical protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3138 YPK_3139 YPK_3139 YPK_3139 3431788 3432375 + conserved hypothetical protein KEGG: ecs:ECs1304 hypothetical protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3139 YPK_3140 YPK_3140 YPK_3140 3432473 3432679 + phage transcriptional regulator%2C AlpA PFAM: Prophage CP4-57 regulatory~KEGG: eca:ECA2863 hypothetical protein gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3140 YPK_3141 YPK_3141 YPK_3141 3432816 3433055 + hypothetical protein KEGG: stm:STM2769 putative transposase gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3141 YPK_3142 YPK_3142 YPK_3142 3433250 3433945 - conserved hypothetical protein KEGG: bbt:BBta_p0020 hypothetical protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3142 YPK_3143 YPK_3143 YPK_3143 3434268 3435014 + hypothetical protein KEGG: ent:Ent638_3387 hypothetical protein gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3143 YPK_3144 YPK_3144 YPK_3144 3435097 3437145 + SMC (structural maintenance of chromosomes) family protein KEGG: asa:ASA_P4G072 SMC (structural maintenance of chromosomes) family protein gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3144 YPK_3145 YPK_3145 YPK_3145 3437156 3439078 + conserved hypothetical protein KEGG: asa:ASA_P4G071 hypothetical protein gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3145 YPK_3146 YPK_3146 YPK_3146 3439343 3439672 + conserved hypothetical protein KEGG: dps:DP2998 hypothetical protein gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3146 YPK_3147 YPK_3147 YPK_3147 3439672 3442944 + Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein~KEGG: dps:DP2999 hypothetical protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3147 YPK_3148 YPK_3148 YPK_3148 3443359 3443514 + hypothetical protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3148 YPK_3149 YPK_3149 YPK_3149 3443988 3445196 - integrase family protein PFAM: integrase family protein~KEGG: ecp:ECP_3765 putative phage integrase gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3149 YPK_3150 YPK_3150 YPK_3150 3445684 3446550 + Methenyltetrahydrofolate cyclohydrolase PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase~KEGG: ypm:YP_0855 putative FolD bifunctional protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3150 YPK_3151 YPK_3151 YPK_3151 3446565 3446777 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3013 hypothetical protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3151 YPK_3152 YPK_3152 YPK_3152 3446999 3448384 - cysteinyl-tRNA synthetase KEGG: yps:YPTB1035 cysteinyl-tRNA synthetase~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia DALR%3B tRNA synthetase class I (M)%3B Cysteinyl-tRNA synthetase class Ia gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3152 YPK_3153 YPK_3153 YPK_3153 3448595 3449089 + peptidyl-prolyl cis-trans isomerase cyclophilin type PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: ypi:YpsIP31758_3015 peptidyl-prolyl cis-trans isomerase B gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3153 YPK_3154 YPK_3154 YPK_3154 3449100 3449822 + UDP-2%2C3-diacylglucosamine hydrolase TIGRFAM: UDP-2%2C3-diacylglucosamine hydrolase~PFAM: metallophosphoesterase~KEGG: ypm:YP_0850 UDP-2%2C3-diacylglucosamine hydrolase gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3154 YPK_3155 YPK_3155 YPK_3155 3450138 3450662 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit KEGG: ypm:YP_0848 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3155 YPK_3156 YPK_3156 YPK_3156 3450659 3451723 + phosphoribosylaminoimidazole carboxylase%2C ATPase subunit KEGG: ypm:YP_0847 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3156 YPK_3157 YPK_3157 YPK_3157 3451767 3454196 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: ypi:YpsIP31758_3019 efflux ABC transporter%2C permease protein gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3157 YPK_3158 YPK_3158 YPK_3158 3454193 3454879 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3020 putatitve ABC transporter%2C ATP-binding protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3158 YPK_3159 YPK_3159 YPK_3159 3454913 3455485 + Lysophospholipase PFAM: lipolytic protein G-D-S-L family~KEGG: ypi:YpsIP31758_3021 GDSL-like lipase/acylhydrolase family protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3159 YPK_3160 YPK_3160 YPK_3160 3455872 3456648 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ypm:YP_0843 probable short-chain dehydrogenase gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3160 YPK_3161 YPK_3161 YPK_3161 3456725 3457594 + Thioredoxin domain PFAM: Thioredoxin domain~KEGG: ypm:YP_0842 putative thioredoxin gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3161 YPK_3162 YPK_3162 YPK_3162 3457789 3458703 + band 7 protein PFAM: band 7 protein~KEGG: ypi:YpsIP31758_3024 SPFH/band 7 family protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3162 YPK_3163 YPK_3163 YPK_3163 3458706 3459155 + protein of unknown function DUF107 PFAM: protein of unknown function DUF107~KEGG: ypm:YP_0840 hypothetical protein gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3163 YPK_3164 YPK_3164 YPK_3164 3459335 3459754 - transcriptional regulator%2C MerR family TIGRFAM: Cu(I)-responsive transcriptional regulator~PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding~KEGG: yps:YPTB1023 putative MerR family copper regulatory protein%2C CueR gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3164 YPK_3165 YPK_3165 YPK_3165 3459961 3462846 + copper-translocating P-type ATPase TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B copper-translocating P-type ATPase%3B heavy metal translocating P-type ATPase~PFAM: Haloacid dehalogenase domain protein hydrolase%3B Heavy metal transport/detoxification protein%3B E1-E2 ATPase-associated domain protein~KEGG: yps:YPTB1022 putative Cu2+ exporting P-type ATPase gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3165 YPK_3166 YPK_3166 YPK_3166 3463119 3463928 + GumN family protein PFAM: GumN family protein~KEGG: yps:YPTB1021 hypothetical protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3166 YPK_3167 YPK_3167 YPK_3167 3464192 3464671 + ybaK/ebsC protein TIGRFAM: ybaK/ebsC protein~PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: yps:YPTB1020 hypothetical protein gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3167 YPK_3168 YPK_3168 YPK_3168 3464737 3464994 + hypothetical protein KEGG: ypi:YpsIP31758_3619 hypothetical protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3168 YPK_3169 YPK_3169 YPK_3169 3465008 3465247 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3031 hypothetical protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3169 YPK_3170 YPK_3170 YPK_3170 3465351 3467005 - 5'-nucleotidase%3B metallophosphoesterase pseudogene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3170 YPK_3172 YPK_3172 YPK_3172 3467287 3467745 + putative membrane efflux protein KEGG: ypm:YP_0833 putative membrane efflux protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3172 YPK_3173 YPK_3173 YPK_3173 3467866 3468324 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3173 YPK_3174 YPK_3174 YPK_3174 3468433 3469212 + putative membrane efflux protein KEGG: ypm:YP_0833 putative membrane efflux protein gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3174 YPK_3175 YPK_3175 YPK_3175 3469447 3471138 + potassium efflux system protein TIGRFAM: potassium efflux system protein~PFAM: TrkA-N domain protein%3B sodium/hydrogen exchanger~KEGG: ypm:YP_0832 putative potassium antiporter gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3175 YPK_3176 YPK_3176 YPK_3176 3471235 3472539 - Inosine kinase PFAM: PfkB domain protein~KEGG: ypi:YpsIP31758_3035 inosine-guanosine kinase gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3176 YPK_3177 YPK_3177 YPK_3177 3472743 3473894 - lipopolysaccharide biosynthesis protein PFAM: lipopolysaccharide biosynthesis protein~KEGG: ypp:YPDSF_2735 O-antigen chain length determinant gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3177 YPK_3178 YPK_3178 YPK_3178 3473942 3475315 - Phosphomannomutase PFAM: phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III~KEGG: ypp:YPDSF_2736 phosphomannomutase gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3178 YPK_3179 YPK_3179 YPK_3179 3475619 3476578 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: spe:Spro_2896 NAD-dependent epimerase/dehydratase gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3179 YPK_3180 YPK_3180 YPK_3180 3476926 3477675 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ypi:YpsIP31758_3038 glycosyl transferase%2C group 2 family protein gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3180 YPK_3181 YPK_3181 YPK_3181 3477710 3479098 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase KEGG: yps:YPTB1011 mannose-1-phosphate guanylyltransferase~TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~PFAM: mannose-6-phosphate isomerase type II%3B Nucleotidyl transferase%3B Cupin 2 conserved barrel domain protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3181 YPK_3182 YPK_3182 YPK_3182 3479306 3480271 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: ypi:YpsIP31758_3040 GDP-L-fucose synthetase gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3182 YPK_3183 YPK_3183 YPK_3183 3480277 3481398 - GDP-mannose 4%2C6-dehydratase TIGRFAM: GDP-mannose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~KEGG: ypi:YpsIP31758_3041 GDP-mannose 4%2C6-dehydratase gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3183 YPK_3184 YPK_3184 YPK_3184 3481414 3482427 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ypi:YpsIP31758_3042 glycosyl transferase WbyK%2C group 1 family protein gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3184 YPK_3185 YPK_3185 YPK_3185 3482447 3483706 - O-antigen biosynthesis protein Wxy KEGG: ypi:YpsIP31758_3043 O-antigen biosynthesis protein Wxy gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3185 YPK_3186 YPK_3186 YPK_3186 3483769 3485076 - LPS side chain defect: putative O-antigen transferase KEGG: stm:STM2088 LPS side chain defect: putative O-antigen transferase gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3186 YPK_3187 YPK_3187 YPK_3187 3485243 3486205 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: yen:YE3081 putative 6-deoxy-D-Gul transferase gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3187 YPK_3188 YPK_3188 YPK_3188 3486687 3487544 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: ypi:YpsIP31758_3048 CDP-paratose synthetase gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3188 YPK_3189 YPK_3189 YPK_3189 3487581 3488894 - DegT/DnrJ/EryC1/StrS aminotransferase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~KEGG: ypi:YpsIP31758_3049 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3189 YPK_3190 YPK_3190 YPK_3190 3488912 3489985 - CDP-glucose 4%2C6-dehydratase TIGRFAM: CDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase%3B polysaccharide biosynthesis protein CapD%3B Male sterility domain~KEGG: ypi:YpsIP31758_3050 CDP-glucose 4%2C6-dehydratase gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3190 YPK_3191 YPK_3191 YPK_3191 3489990 3490763 - glucose-1-phosphate cytidylyltransferase TIGRFAM: glucose-1-phosphate cytidylyltransferase~PFAM: Nucleotidyl transferase~KEGG: ypm:YP_0815 glucose-1-phosphate cytidylyltransferase gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3191 YPK_3192 YPK_3192 YPK_3192 3490801 3491790 - oxidoreductase FAD/NAD(P)-binding domain protein PFAM: ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypm:YP_0814 cdp-6-deoxy-delta-3%2C4-glucoseen reductase gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3192 YPK_3193 YPK_3193 YPK_3193 3492388 3493350 - Ferrochelatase PFAM: ferrochelatase~KEGG: ypi:YpsIP31758_3053 ferrochelatase gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3193 YPK_3194 YPK_3194 YPK_3194 3493440 3494084 - Nucleoside-triphosphate--adenylate kinase PFAM: adenylate kinase%3B adenylate kinase lid domain protein~KEGG: ypi:YpsIP31758_3054 adenylate kinase gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3194 YPK_3195 YPK_3195 YPK_3195 3494311 3496185 - heat shock protein Hsp90 PFAM: heat shock protein Hsp90%3B ATP-binding region ATPase domain protein~KEGG: yps:YPTB0995 chaperone Hsp90%2C heat shock protein C 62.5 gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3195 YPK_3196 YPK_3196 YPK_3196 3496377 3496952 - recombination protein RecR KEGG: ypm:YP_0809 recombination protein RecR~TIGRFAM: recombination protein RecR~PFAM: TOPRIM domain protein%3B Zinc finger C4-type%2C RecR~SMART: Toprim sub domain protein gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3196 YPK_3197 YPK_3197 YPK_3197 3496982 3497314 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_3058 conserved hypothetical protein TIGR00103 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3197 YPK_3198 YPK_3198 YPK_3198 3497370 3499346 - DNA polymerase III%2C subunits gamma and tau KEGG: ypm:YP_0807 DNA polymerase III subunit Tau (Contains DNA polymerase III subunit Gamma)~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3198 YPK_3199 YPK_3199 YPK_3199 3500002 3500565 - adenine phosphoribosyltransferase TIGRFAM: adenine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~KEGG: ypi:YpsIP31758_3060 adenine phosphoribosyltransferase gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3199 YPK_3200 YPK_3200 YPK_3200 3500829 3500963 - hypothetical protein gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3200 YPK_3201 YPK_3201 YPK_3201 3501022 3501186 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3061 hypothetical protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3201 YPK_3202 YPK_3202 YPK_3202 3501385 3501921 + Primosomal replication priB and priC PFAM: Primosomal replication priB and priC~KEGG: ypi:YpsIP31758_3062 primosomal replication protein N'' gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3202 YPK_3203 YPK_3203 YPK_3203 3502092 3502247 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3063 hypothetical protein gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3203 YPK_3204 YPK_3204 YPK_3204 3502570 3505932 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ypi:YpsIP31758_3064 potassium efflux system KefA gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3204 YPK_3205 YPK_3205 YPK_3205 3506228 3506581 - DsrE family protein PFAM: DsrE family protein~KEGG: ypi:YpsIP31758_3065 DsrE family protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3205 YPK_3206 YPK_3206 YPK_3206 3506594 3507250 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Tetracycline transcriptional repressor MAATS-type domain protein~KEGG: ypi:YpsIP31758_3066 transcriptional regulator AcrR gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3206 YPK_3207 YPK_3207 YPK_3207 3507395 3508582 + efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: ypm:YP_0799 multidrug efflux protein gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3207 YPK_3208 YPK_3208 YPK_3208 3508599 3511751 + transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein~KEGG: ypi:YpsIP31758_3068 acriflavine resistance protein B gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3208 YPK_3209 YPK_3209 YPK_3209 3511951 3512409 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3209 YPK_3210 YPK_3210 YPK_3210 3512647 3512907 + ribosomal protein L31 PFAM: ribosomal protein L31~KEGG: ypi:YpsIP31758_3069 ribosomal protein L31P family gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3210 YPK_3211 YPK_3211 YPK_3211 3512923 3513066 + ribosomal protein L36 PFAM: ribosomal protein L36~KEGG: ypm:YP_0796 putative ribosomal protein L36 gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3211 YPK_3212 YPK_3212 YPK_3212 3513930 3514283 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3071 hypothetical protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3212 YPK_3213 YPK_3213 YPK_3213 3514442 3514810 + conserved hypothetical protein KEGG: ypm:YP_0794 hypothetical protein gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3213 YPK_3214 YPK_3214 YPK_3214 3514859 3515062 + Haemolysin expression modulating family protein PFAM: Haemolysin expression modulating family protein~KEGG: yen:YE3115 modulating protein YmoA (histone-like protein) gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3214 YPK_3215 YPK_3215 YPK_3215 3515794 3516357 + methylated-DNA--protein-cysteine methyltransferase TIGRFAM: methylated-DNA--protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding~KEGG: yps:YPTB0977 putative 6-O-methylguanine DNA methyltransferase family protein gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3215 YPK_3216 YPK_3216 YPK_3216 3516493 3517014 - putative lipoprotein KEGG: ypi:YpsIP31758_3075 putative lipoprotein gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3216 YPK_3217 YPK_3217 YPK_3217 3517271 3518131 + acyl-CoA thioesterase II KEGG: yps:YPTB0975 acyl-CoA thioesterase II~TIGRFAM: acyl-CoA thioesterase II~PFAM: acyl-CoA thioesterase gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3217 YPK_3218 YPK_3218 YPK_3218 3518337 3518429 - hypothetical protein gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3218 YPK_3219 YPK_3219 YPK_3219 3518392 3519684 - ammonium transporter TIGRFAM: ammonium transporter~PFAM: Rh family protein/ammonium transporter~KEGG: ypm:YP_0789 probable ammonium transporter gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3219 YPK_3220 YPK_3220 YPK_3220 3519721 3520059 - nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: ypk:y1041 nitrogen regulatory protein P-II 2 gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3220 YPK_3221 YPK_3221 YPK_3221 3520511 3522334 - ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3079 multidrug ABC transporter%2C permease protein/ATP-binding protein MdlB gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3221 YPK_3222 YPK_3222 YPK_3222 3522327 3524093 - ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3080 multidrug ABC transporter%2C permease protein/ATP-binding protein MdlA gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3222 YPK_3223 YPK_3223 YPK_3223 3524195 3524656 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: ypi:YpsIP31758_3081 transcriptional regulator%2C AsnC family gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3223 YPK_3224 YPK_3224 YPK_3224 3524782 3525822 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypm:YP_0784 putative Pyridoxal-phosphate dependent protein gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3224 YPK_3225 YPK_3225 YPK_3225 3526034 3526855 - Cof-like hydrolase TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase%3B Haloacid dehalogenase domain protein hydrolase type 3~KEGG: ypi:YpsIP31758_3083 HAD hydrolase%2C IIB family gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3225 YPK_3226 YPK_3226 YPK_3226 3526960 3528663 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ypp:YPDSF_2784 hypothetical protein gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3226 YPK_3227 YPK_3227 YPK_3227 3528952 3529650 + exsB protein TIGRFAM: exsB protein~PFAM: ExsB family protein~KEGG: ypi:YpsIP31758_3085 queuosine biosynthesis protein QueC gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3227 YPK_3228 YPK_3228 YPK_3228 3529736 3530143 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ypm:YP_0780 predicted thioesterase gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3228 YPK_3229 YPK_3229 YPK_3229 3530497 3530943 - competence protein ComEA helix-hairpin-helix repeat protein TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein~KEGG: ypi:YpsIP31758_3087 putative competence protein ComEA gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3229 YPK_3230 YPK_3230 YPK_3230 3531083 3532969 - PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: ypi:YpsIP31758_3088 peptidyl-prolyl cis-trans isomerase gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3230 YPK_3231 YPK_3231 YPK_3231 3533270 3533542 - histone family protein DNA-binding protein PFAM: histone family protein DNA-binding protein~KEGG: ypm:YP_0777 DNA-binding protein HU-beta gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3231 YPK_3232 YPK_3232 YPK_3232 3533760 3536114 - ATP-dependent protease La KEGG: ypi:YpsIP31758_3090 ATP-dependent protease La~TIGRFAM: ATP-dependent protease La~PFAM: peptidase S16 lon domain protein%3B AAA ATPase central domain protein%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3232 YPK_3233 YPK_3233 YPK_3233 3536309 3537580 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX KEGG: ypi:YpsIP31758_3091 ATP-dependent Clp protease%2C ATP-binding subunit ClpX~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: zinc finger C4 domain protein%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3233 YPK_3234 YPK_3234 YPK_3234 3537786 3538409 - ATP-dependent Clp protease%2C proteolytic subunit ClpP KEGG: ypi:YpsIP31758_3092 ATP-dependent Clp protease%2C proteolytic subunit ClpP~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: peptidase S14 ClpP gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3234 YPK_3235 YPK_3235 YPK_3235 3538871 3540175 - trigger factor TIGRFAM: trigger factor~PFAM: peptidylprolyl isomerase FKBP-type%3B trigger factor domain protein%3B trigger factor domain~KEGG: ypi:YpsIP31758_3093 trigger factor gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3235 YPK_3236 YPK_3236 YPK_3236 3540248 3540433 - conserved hypothetical protein KEGG: yps:YPTB0957 hypothetical protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3236 YPK_3237 YPK_3237 YPK_3237 3540592 3540912 - BolA family protein PFAM: BolA family protein~KEGG: ypi:YpsIP31758_3094 BolA protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3237 YPK_3238 YPK_3238 YPK_3238 3541261 3541839 + Uncharacterized lipoprotein PFAM: Uncharacterized lipoprotein~KEGG: ypi:YpsIP31758_3095 putative lipoprotein gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3238 YPK_3239 YPK_3239 YPK_3239 3541956 3543434 + AmpG-related permease TIGRFAM: AmpG-related permease~PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_0769 beta-lactamase induction signal transducer AmpG gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3239 YPK_3240 YPK_3240 YPK_3240 3543719 3543832 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3097 hypothetical protein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3240 YPK_3241 YPK_3241 YPK_3241 3544852 3545808 + ubiquinol oxidase%2C subunit II TIGRFAM: ubiquinol oxidase%2C subunit II~PFAM: cytochrome c oxidase subunit II%3B COX aromatic rich domain protein~KEGG: ypm:YP_0767 cytochrome O ubiquinol oxidase subunit II gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3241 YPK_3242 YPK_3242 YPK_3242 3545813 3547804 + cytochrome o ubiquinol oxidase%2C subunit I KEGG: ypi:YpsIP31758_3099 cytochrome o ubiquinol oxidase%2C subunit I~TIGRFAM: cytochrome o ubiquinol oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3242 YPK_3243 YPK_3243 YPK_3243 3547794 3548408 + cytochrome o ubiquinol oxidase%2C subunit III TIGRFAM: cytochrome o ubiquinol oxidase%2C subunit III~PFAM: cytochrome c oxidase subunit III~KEGG: ypi:YpsIP31758_3100 cytochrome o ubiquinol oxidase%2C subunit III gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3243 YPK_3244 YPK_3244 YPK_3244 3548408 3548740 + cytochrome o ubiquinol oxidase subunit IV TIGRFAM: cytochrome o ubiquinol oxidase subunit IV~PFAM: cytochrome C oxidase subunit IV~KEGG: ypi:YpsIP31758_3101 cytochrome o ubiquinol oxidase%2C subunit IV gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3244 YPK_3245 YPK_3245 YPK_3245 3548754 3549641 + protoheme IX farnesyltransferase TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase~KEGG: ypi:YpsIP31758_3102 protoheme IX farnesyltransferase gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3245 YPK_3246 YPK_3246 YPK_3246 3550125 3551489 + major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_3103 transporter%2C major facilitator family gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3246 YPK_3247 YPK_3247 YPK_3247 3551613 3552104 - protein of unknown function DUF520 PFAM: protein of unknown function DUF520~KEGG: ypm:YP_0761 hypothetical protein gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3247 YPK_3248 YPK_3248 YPK_3248 3552336 3553247 + 2-dehydropantoate 2-reductase KEGG: ypm:YP_0760 2-dehydropantoate 2-reductase~TIGRFAM: 2-dehydropantoate 2-reductase~PFAM: Ketopantoate reductase ApbA/PanE domain protein gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3248 YPK_3249 YPK_3249 YPK_3249 3553210 3553800 + DJ-1 family protein TIGRFAM: DJ-1 family protein~PFAM: ThiJ/PfpI domain protein~KEGG: ypm:YP_0759 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3249 YPK_3250 YPK_3250 YPK_3250 3553868 3555319 - thiamine biosynthesis/tRNA modification protein ThiI TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI~PFAM: thiamine biosynthesis protein%3B THUMP domain protein~KEGG: ypm:YP_0758 thiamine biosynthesis protein gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3250 YPK_3251 YPK_3251 YPK_3251 3555669 3555923 + exodeoxyribonuclease VII%2C small subunit TIGRFAM: exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit~KEGG: ypi:YpsIP31758_3110 exodeoxyribonuclease VII%2C small subunit gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3251 YPK_3252 YPK_3252 YPK_3252 3555928 3556848 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: ypi:YpsIP31758_3111 geranyltranstransferase gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3252 YPK_3253 YPK_3253 YPK_3253 3557004 3558863 + deoxyxylulose-5-phosphate synthase TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: ypi:YpsIP31758_3112 1-deoxy-D-xylulose-5-phosphate synthase gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3253 YPK_3254 YPK_3254 YPK_3254 3559004 3559489 - phosphatidylglycerophosphatase A PFAM: phosphatidylglycerophosphatase A~KEGG: ypi:YpsIP31758_3113 phosphatidylglycerophosphatase A gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3254 YPK_3255 YPK_3255 YPK_3255 3559482 3560471 - thiamine-monophosphate kinase KEGG: ypp:YPDSF_2815 thiamine-monophosphate kinase~TIGRFAM: thiamine-monophosphate kinase~PFAM: AIR synthase related protein domain protein gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3255 YPK_3256 YPK_3256 YPK_3256 3560712 3561128 - NusB antitermination factor TIGRFAM: transcription antitermination factor NusB~PFAM: NusB/RsmB/TIM44~KEGG: ypi:YpsIP31758_3115 transcription antitermination factor NusB gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3256 YPK_3257 YPK_3257 YPK_3257 3561149 3561619 - 6%2C7-dimethyl-8-ribityllumazine synthase KEGG: ypi:YpsIP31758_3116 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3257 YPK_3258 YPK_3258 YPK_3258 3561755 3562864 - riboflavin biosynthesis protein RibD KEGG: yps:YPTB0934 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis~TIGRFAM: riboflavin biosynthesis protein RibD~PFAM: CMP/dCMP deaminase zinc-binding%3B bifunctional deaminase-reductase domain protein gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3258 YPK_3259 YPK_3259 YPK_3259 3562996 3563445 - ATP-cone domain protein PFAM: ATP-cone domain protein~KEGG: ypi:YpsIP31758_3118 transcriptional regulator%2C NrdR family gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3259 YPK_3260 YPK_3260 YPK_3260 3563516 3564847 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3119 hypothetical protein gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3260 YPK_3261 YPK_3261 YPK_3261 3565100 3566068 - protein-export membrane protein SecF TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: ypm:YP_0743 protein-export membrane protein SecF gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3261 YPK_3262 YPK_3262 YPK_3262 3566079 3567893 - protein-export membrane protein SecD TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecD~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: ypm:YP_0742 protein-export membrane protein SecD gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3262 YPK_3263 YPK_3263 YPK_3263 3567954 3568289 - preprotein translocase%2C YajC subunit TIGRFAM: preprotein translocase%2C YajC subunit~PFAM: YajC family protein~KEGG: ypm:YP_0741 putative membrane protein gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3263 YPK_3264 YPK_3264 YPK_3264 3568401 3569525 - queuine tRNA-ribosyltransferase KEGG: ypi:YpsIP31758_3123 queuine tRNA-ribosyltransferase~TIGRFAM: tRNA-guanine transglycosylase%2C various specificities%3B queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3264 YPK_3265 YPK_3265 YPK_3265 3569618 3570688 - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein~KEGG: ypi:YpsIP31758_3124 S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3265 YPK_3266 YPK_3266 YPK_3266 3570864 3571472 + (Acyl-carrier-protein) phosphodiesterase PFAM: protein of unknown function DUF479~KEGG: ypp:YPDSF_2828 hypothetical protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3266 YPK_3267 YPK_3267 YPK_3267 3571791 3572393 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: ypm:YP_0737 putative alkyl hydroperoxide reductase subunit c gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3267 YPK_3268 YPK_3268 YPK_3268 3572383 3572499 - hypothetical protein gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3268 YPK_3269 YPK_3269 YPK_3269 3572783 3574546 + gamma-glutamyltransferase KEGG: yps:YPTB0924 gamma-glutamyltranspeptidase precursor~TIGRFAM: gamma-glutamyltransferase~PFAM: gamma-glutamyltranspeptidase gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3269 YPK_3270 YPK_3270 YPK_3270 3574754 3575434 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ypm:YP_0733 short chain dehydrogenase gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3270 YPK_3271 YPK_3271 YPK_3271 3575590 3577419 - alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: yps:YPTB0922 putative maltodextrin glucosidase category%3DG group%3DCOG0366 glycosidases' gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3271 YPK_3272 YPK_3272 YPK_3272 3577965 3579356 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: yps:YPTB0921 probable APC family%2C proline transporter gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3272 YPK_3273 YPK_3273 YPK_3273 3579432 3580751 - branched-chain amino acid transport system II carrier protein PFAM: branched-chain amino acid transport system II carrier protein~KEGG: ypi:YpsIP31758_3133 branched-chain amino acid transport system II carrier protein gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3273 YPK_3274 YPK_3274 YPK_3274 3581225 3582289 - phosphate binding protein TIGRFAM: phosphate binding protein~KEGG: yps:YPTB0919 ABC superfamily (peri_bind) high-affinity phosphate transporter gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3274 YPK_3275 YPK_3275 YPK_3275 3582311 3583627 - PAS/PAC sensor signal transduction histidine kinase KEGG: ypm:YP_0728 phosphate regulon sensor protein PhoR~TIGRFAM: PAS sensor protein%3B phosphate regulon sensor kinase PhoR~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold domain protein~SMART: PAS domain containing protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3275 YPK_3276 YPK_3276 YPK_3276 3583652 3584341 - two component transcriptional regulator%2C winged helix family TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB~PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_0727 phosphate regulon transcriptional regulatory protein gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3276 YPK_3277 YPK_3277 YPK_3277 3584609 3585853 + nuclease SbcCD%2C D subunit TIGRFAM: nuclease SbcCD%2C D subunit~PFAM: metallophosphoesterase~KEGG: ypp:YPDSF_2839 exonuclease SbcD gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3277 YPK_3278 YPK_3278 YPK_3278 3585850 3589539 + SMC domain protein PFAM: SMC domain protein~KEGG: yps:YPTB0915 putative ATP-dependent dsDNA exonuclease gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3278 YPK_3279 YPK_3279 YPK_3279 3589743 3590657 - ROK family protein PFAM: ROK family protein~KEGG: ypm:YP_0724 transcriptional regulators gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3279 YPK_3280 YPK_3280 YPK_3280 3590990 3591901 + putative exonuclease RdgC PFAM: putative exonuclease RdgC~KEGG: ypi:YpsIP31758_3141 recombination-associated protein RdgC gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3280 YPK_3281 YPK_3281 YPK_3281 3592130 3592417 - protein of unknown function DUF1255 PFAM: protein of unknown function DUF1255~KEGG: ypi:YpsIP31758_3142 hypothetical protein gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3281 YPK_3282 YPK_3282 YPK_3282 3592914 3593438 - Shikimate kinase PFAM: shikimate kinase~KEGG: ypi:YpsIP31758_3143 shikimate kinase 2 gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3282 YPK_3283 YPK_3283 YPK_3283 3593685 3594242 - putative methyltransferase KEGG: ypi:YpsIP31758_3144 putative methyltransferase gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3283 YPK_3284 YPK_3284 YPK_3284 3594973 3595494 - Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: ypi:YpsIP31758_3145 hypothetical protein gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3284 YPK_3285 YPK_3285 YPK_3285 3595740 3595994 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3147 hypothetical protein gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3285 YPK_3286 YPK_3286 YPK_3286 3596192 3596950 - YcgR family protein PFAM: type IV pilus assembly PilZ%3B YcgR family protein~KEGG: yps:YPTB0906 hypothetical protein gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3286 YPK_3287 YPK_3287 YPK_3287 3597278 3598537 - gamma-glutamyl phosphate reductase TIGRFAM: gamma-glutamyl phosphate reductase~KEGG: ypi:YpsIP31758_3149 gamma-glutamyl phosphate reductase gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3287 YPK_3288 YPK_3288 YPK_3288 3598547 3599650 - glutamate 5-kinase KEGG: ypm:YP_0711 glutamate 5-kinase~TIGRFAM: glutamate 5-kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3288 YPK_3289 YPK_3289 YPK_3289 3599827 3600228 - transcriptional regulator Crl PFAM: transcriptional regulator Crl~KEGG: yps:YPTB0903 transcriptional regulator of cryptic genes for curli formation and fibronectin binding gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3289 YPK_3290 YPK_3290 YPK_3290 3600288 3601535 - protein of unknown function DUF1100 hydrolase family protein PFAM: protein of unknown function DUF1100 hydrolase family protein~KEGG: ypi:YpsIP31758_3152 esterase YafA gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3290 YPK_3291 YPK_3291 YPK_3291 3601662 3602120 - Xanthine phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: ypm:YP_0708 xanthine-guanine phosphoribosyltransferase gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3291 YPK_3292 YPK_3292 YPK_3292 3602547 3602852 + putative holin protein KEGG: yps:YPTB0900 possible holin protein gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3292 YPK_3293 YPK_3293 YPK_3293 3603049 3604653 + chitin-binding domain 3 protein PFAM: PKD domain containing protein%3B chitin-binding domain 3 protein~KEGG: ypi:YpsIP31758_3154 chitin binding domain protein gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3293 YPK_3294 YPK_3294 YPK_3294 3605112 3605897 - transcriptional regulator%2C LysR family KEGG: ypi:YpsIP31758_3155 transcriptional regulator%2C LysR family gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3294 YPK_3295 YPK_3295 YPK_3295 3607899 3609359 + aminoacyl-histidine dipeptidase KEGG: ypm:YP_0703 aminoacyl-histidine dipeptidase~TIGRFAM: aminoacyl-histidine dipeptidase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3295 YPK_3296 YPK_3296 YPK_3296 3609473 3610531 - DNA-directed DNA polymerase PFAM: UMUC domain protein DNA-repair protein~KEGG: ypi:YpsIP31758_3157 DNA polymerase IV gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3296 YPK_3297 YPK_3297 YPK_3297 3610887 3611834 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: yps:YPTB0895 hypothetical protein gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3297 YPK_3298 YPK_3298 YPK_3298 3612079 3612306 - protein of unknown function DUF539 PFAM: protein of unknown function DUF539~KEGG: ypi:YpsIP31758_3159 hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3298 YPK_3299 YPK_3299 YPK_3299 3612319 3613398 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: ypm:YP_0699 thiamine biosynthesis lipoprotein gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3299 YPK_3300 YPK_3300 YPK_3300 3613382 3614605 - NADH:ubiquinone oxidoreductase%2C subunit F TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit F~PFAM: ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypi:YpsIP31758_3161 NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3300 YPK_3301 YPK_3301 YPK_3301 3614621 3615217 - NADH:ubiquinone oxidoreductase%2C subunit E TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit E~PFAM: RnfA-Nqr electron transport subunit~KEGG: ypi:YpsIP31758_3162 NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3301 YPK_3302 YPK_3302 YPK_3302 3615224 3615853 - NADH:ubiquinone oxidoreductase%2C subunit D TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit D~PFAM: RnfA-Nqr electron transport subunit~KEGG: ypm:YP_0696 Na+-translocating NADH-quinone reductase subunit D gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3302 YPK_3303 YPK_3303 YPK_3303 3615846 3616646 - NADH:ubiquinone oxidoreductase%2C subunit C TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit C~PFAM: FMN-binding domain protein~KEGG: yps:YPTB0889 Na+-translocating NADH-quinone reductase subunit C gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3303 YPK_3304 YPK_3304 YPK_3304 3616636 3617877 - NADH:ubiquinone oxidoreductase%2C subunit B TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit B~PFAM: NQR2 and RnfD family protein~KEGG: ypm:YP_0694 NADH-ubiquinone oxidoreductase subunit B gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3304 YPK_3305 YPK_3305 YPK_3305 3617881 3619242 - NADH:ubiquinone oxidoreductase%2C subunit A TIGRFAM: NADH:ubiquinone oxidoreductase%2C subunit A~PFAM: Na-translocating NADH-quinone reductase subunit A~KEGG: ypp:YPDSF_2867 NADH-ubiquinone oxidoreductase subunit A gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3305 YPK_3306 YPK_3306 YPK_3306 3619720 3620460 + protein of unknown function DUF949 PFAM: protein of unknown function DUF949~KEGG: ypi:YpsIP31758_3169 hypothetical protein gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3306 YPK_3307 YPK_3307 YPK_3307 3620425 3621198 - glutamine amidotransferase class-II PFAM: glutamine amidotransferase class-II~KEGG: yps:YPTB0885 hypothetical protein gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3307 YPK_3308 YPK_3308 YPK_3308 3621401 3621982 - phosphoheptose isomerase TIGRFAM: phosphoheptose isomerase~KEGG: ypm:YP_0689 phosphoheptose isomerase gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3308 YPK_3309 YPK_3309 YPK_3309 3622221 3624668 + Protein of unknown function DUF1974 PFAM: acyl-CoA dehydrogenase domain protein%3B Protein of unknown function DUF1974~KEGG: ypi:YpsIP31758_3171 acyl-coenzyme A dehydrogenase domain protein gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3309 YPK_3310 YPK_3310 YPK_3310 3624840 3625586 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3172 hypothetical protein gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3310 YPK_3311 YPK_3311 YPK_3311 3625588 3627441 - putative accessory processing protein KEGG: yps:YPTB0881 putative accessory processing protein%3B involved in the adherence of host cells gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3311 YPK_3312 YPK_3312 YPK_3312 3627596 3633760 - filamentous haemagglutinin family outer membrane protein TIGRFAM: filamentous haemagglutinin family outer membrane protein~PFAM: filamentous haemagglutinin domain protein~KEGG: yps:YPTB0880 putative adhesin%3B involved in the adherence of host cells gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3312 YPK_3313 YPK_3313 YPK_3313 3633801 3635591 - Polypeptide-transport-associated domain protein ShlB-type PFAM: Polypeptide-transport-associated domain protein ShlB-type~KEGG: ypi:YpsIP31758_3175 putative lipoprotein gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3313 YPK_3314 YPK_3314 YPK_3314 3636195 3636287 - hypothetical protein gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3314 YPK_3315 YPK_3315 YPK_3315 3636318 3636488 + invasin KEGG: ypp:YPDSF_1331 invasin gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3315 YPK_3316 YPK_3316 YPK_3316 3636478 3636891 + transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3316 YPK_3317 YPK_3317 YPK_3317 3637514 3638737 - 5-methylthioribose kinase TIGRFAM: 5-methylthioribose kinase~KEGG: ypp:YPDSF_2878 5-methylthioribose kinase gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3317 YPK_3318 YPK_3318 YPK_3318 3638933 3639973 + translation initiation factor%2C aIF-2BI family KEGG: ypi:YpsIP31758_3179 eIF-2B alpha/beta/delta family protein~TIGRFAM: translation initiation factor%2C aIF-2BI family%3B eIF-2B alpha/beta/delta-related uncharacterized protein~PFAM: initiation factor 2B related gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3318 YPK_3319 YPK_3319 YPK_3319 3640016 3640558 - Acireductone dioxygenase ARD PFAM: Acireductone dioxygenase ARD~KEGG: ypi:YpsIP31758_3180 dioxygenase%2C ARD/ARD' family gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3319 YPK_3320 YPK_3320 YPK_3320 3640684 3641373 - 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1%3B 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypp:YPDSF_2881 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3320 YPK_3321 YPK_3321 YPK_3321 3641370 3642038 - methylthioribulose-1-phosphate dehydratase TIGRFAM: methylthioribulose-1-phosphate dehydratase~PFAM: class II aldolase/adducin family protein~KEGG: yps:YPTB0874 hypothetical protein gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3321 YPK_3322 YPK_3322 YPK_3322 3642178 3643338 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: ypi:YpsIP31758_3183 aminotransferase%2C class I and II gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3322 YPK_3323 YPK_3323 YPK_3323 3643326 3644096 + Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: ypi:YpsIP31758_3184 hydrolase%2C carbon-nitrogen family gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3323 YPK_3324 YPK_3324 YPK_3324 3644817 3646100 - amidase%2C hydantoinase/carbamoylase family KEGG: yps:YPTB0871 N-carbamoyl-L-amino acid amidohydrolase~TIGRFAM: amidase%2C hydantoinase/carbamoylase family~PFAM: peptidase M20 gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3324 YPK_3325 YPK_3325 YPK_3325 3646100 3647425 - aminotransferase class V PFAM: aminotransferase class V~KEGG: yps:YPTB0870 aminotransferase%2C class V gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3325 YPK_3326 YPK_3326 YPK_3326 3647457 3648203 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0679 putative amino acid ABC transporter%2C ATP-binding protein gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3326 YPK_3327 YPK_3327 YPK_3327 3648184 3648837 - polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_3188 amino acid ABC transporter%2C permease protein gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3327 YPK_3328 YPK_3328 YPK_3328 3648834 3649502 - polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_0677 putative amino acid ABC transporter%2C permease protein gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3328 YPK_3329 YPK_3329 YPK_3329 3649515 3650303 - extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~KEGG: ypi:YpsIP31758_3190 amino acid ABC transporter%2C periplasmic amino acid-binding protein gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3329 YPK_3330 YPK_3330 YPK_3330 3650631 3651464 - transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: ypm:YP_0674 putative RpiR-family transcriptional regulatory protein gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3330 YPK_3331 YPK_3331 YPK_3331 3651774 3651977 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3193 hypothetical protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3331 YPK_3332 YPK_3332 YPK_3332 3651974 3653371 + amidohydrolase%2C AtzE family TIGRFAM: amidohydrolase%2C AtzE family~PFAM: Amidase~KEGG: ypm:YP_0671 amidase gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3332 YPK_3333 YPK_3333 YPK_3333 3653400 3653867 + conserved hypothetical protein KEGG: ypa:YPA_2753 hypothetical protein gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3333 YPK_3334 YPK_3334 YPK_3334 3654107 3655306 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_3197 transporter%2C major facilitator family gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3334 YPK_3335 YPK_3335 YPK_3335 3655466 3656239 + AzlC family protein PFAM: AzlC family protein~KEGG: ypm:YP_0668 putative amino acid transporter gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3335 YPK_3336 YPK_3336 YPK_3336 3656236 3656577 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3199 hypothetical protein gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3336 YPK_3337 YPK_3337 YPK_3337 3656749 3657261 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~KEGG: ypi:YpsIP31758_3200 transcriptional repressor MprA gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3337 YPK_3338 YPK_3338 YPK_3338 3657645 3658817 + efflux pump membrane protein TIGRFAM: efflux pump membrane protein~PFAM: secretion protein HlyD family protein~KEGG: ypm:YP_0664 multidrug resistance protein A gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3338 YPK_3339 YPK_3339 YPK_3339 3658856 3660391 + drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_0663 multidrug resistance protein B gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3339 YPK_3340 YPK_3340 YPK_3340 3660524 3661690 - tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: ypp:YPDSF_2905 tRNA/rRNA methyltransferase gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3340 YPK_3341 YPK_3341 YPK_3341 3661942 3662379 + thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: ypp:YPDSF_2906 thioredoxin 2 gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3341 YPK_3342 YPK_3342 YPK_3342 3662549 3663235 + DTW domain containing protein PFAM: DTW domain containing protein~KEGG: ypp:YPDSF_2907 hypothetical protein gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3342 YPK_3343 YPK_3343 YPK_3343 3663330 3665972 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase%3B CoA-binding domain protein~KEGG: ypi:YpsIP31758_3206 putative acyl-CoA synthetase gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3343 YPK_3344 YPK_3344 YPK_3344 3666148 3667503 + phospholipase D/Transphosphatidylase PFAM: phospholipase D/Transphosphatidylase~KEGG: ypi:YpsIP31758_3207 CDP-diacylglycerol--serine O-phosphatidyltransferase gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3344 YPK_3345 YPK_3345 YPK_3345 3667565 3667906 + putative lipoprotein KEGG: ypm:YP_0657 putative lipoprotein gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3345 YPK_3346 YPK_3346 YPK_3346 3668009 3668551 + hypothetical protein KEGG: ypi:YpsIP31758_3839 hypothetical protein gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3346 YPK_3349 YPK_3349 YPK_3349 3674077 3676650 - ATP-dependent chaperone ClpB KEGG: ypi:YpsIP31758_3212 chaperone ClpB~TIGRFAM: ATP-dependent chaperone ClpB~PFAM: AAA ATPase central domain protein%3B Clp domain protein%3B ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3349 YPK_3350 YPK_3350 YPK_3350 3676780 3677511 - protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: ypi:YpsIP31758_3213 conserved hypothetical protein TIGR00726 gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3350 YPK_3351 YPK_3351 YPK_3351 3677513 3678490 - pseudouridine synthase%2C RluA family KEGG: yps:YPTB0846 pseudouridine synthase (pseudouridines 1911%2C 1915%2C 1917 in 23S RNA)~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3351 YPK_3352 YPK_3352 YPK_3352 3678626 3679357 + putative lipoprotein KEGG: ypi:YpsIP31758_3215 putative lipoprotein gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3352 YPK_3353 YPK_3353 YPK_3353 3679712 3680074 + sigma 54 modulation protein/ribosomal protein S30EA TIGRFAM: ribosomal subunit interface protein~PFAM: sigma 54 modulation protein/ribosomal protein S30EA~KEGG: ypi:YpsIP31758_3216 ribosomal subunit interface protein gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3353 YPK_3354 YPK_3354 YPK_3354 3680164 3680301 - hypothetical protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3354 YPK_3355 YPK_3355 YPK_3355 3680436 3681593 + chorismate mutase TIGRFAM: chorismate mutase~PFAM: prephenate dehydratase%3B Chorismate mutase~KEGG: ypi:YpsIP31758_3218 P-protein gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3355 YPK_3356 YPK_3356 YPK_3356 3681698 3682819 - chorismate mutase TIGRFAM: chorismate mutase~PFAM: Chorismate mutase%3B Prephenate dehydrogenase~KEGG: ypi:YpsIP31758_3219 T-protein gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3356 YPK_3357 YPK_3357 YPK_3357 3682832 3683908 - phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: ypi:YpsIP31758_3220 phospho-2-dehydro-3-deoxyheptonate aldolase%2C Tyr-sensitive~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3357 YPK_3358 YPK_3358 YPK_3358 3684135 3684851 + two component transcriptional regulator%2C LytTR family PFAM: response regulator receiver%3B LytTr DNA-binding region~KEGG: yps:YPTB0840 putative two-component system response regulator gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3358 YPK_3359 YPK_3359 YPK_3359 3685284 3686627 + anaerobic c4-dicarboxylate antiporter%2C Dcu family TIGRFAM: anaerobic c4-dicarboxylate antiporter%2C Dcu family~PFAM: anaerobic c4-dicarboxylate membrane transporter~KEGG: ypi:YpsIP31758_3222 anaerobic C4-dicarboxylate transporter DcuB gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3359 YPK_3360 YPK_3360 YPK_3360 3686950 3687717 + protein of unknown function DUF481 PFAM: protein of unknown function DUF481~KEGG: ypi:YpsIP31758_3223 hypothetical protein gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3360 YPK_3361 YPK_3361 YPK_3361 3687980 3688327 - ribosomal protein L19 PFAM: ribosomal protein L19~KEGG: ypi:YpsIP31758_3225 ribosomal protein L19 gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3361 YPK_3362 YPK_3362 YPK_3362 3688408 3689148 - tRNA (guanine-N1)-methyltransferase KEGG: ypi:YpsIP31758_3226 tRNA (guanine-N1)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3362 YPK_3363 YPK_3363 YPK_3363 3689187 3689735 - 16S rRNA processing protein RimM TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein%3B PRC-barrel domain protein~KEGG: ypn:YPN_0804 16S rRNA processing protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3363 YPK_3364 YPK_3364 YPK_3364 3689757 3690005 - ribosomal protein S16 PFAM: ribosomal protein S16~KEGG: ypm:YP_0391 30S ribosomal protein S16 gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3364 YPK_3365 YPK_3365 YPK_3365 3690233 3691594 - signal recognition particle protein KEGG: yps:YPTB0833 4.5S-RNP protein (ffh)%2C GTP binding export factor%2C part of signal recognition particle with 4.5S RNA~TIGRFAM: signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B Signal peptide binding (SRP54) M- domain protein%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3365 YPK_3366 YPK_3366 YPK_3366 3691760 3692551 + cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: ypm:YP_0388 hypothetical protein gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3366 YPK_3367 YPK_3367 YPK_3367 3692620 3693903 + protein of unknown function DUF21 PFAM: CBS domain containing protein%3B protein of unknown function DUF21%3B transporter-associated region~KEGG: ypm:YP_0387 hypothetical protein gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3367 YPK_3368 YPK_3368 YPK_3368 3693992 3694507 - quorum-sensing autoinducer 2 (AI-2)%2C LuxS PFAM: LuxS protein~KEGG: ypi:YpsIP31758_3233 S-ribosylhomocysteine lyase gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3368 YPK_3369 YPK_3369 YPK_3369 3694675 3696273 - glutamate--cysteine ligase TIGRFAM: glutamate--cysteine ligase~KEGG: ypi:YpsIP31758_3234 glutamate--cysteine ligase gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3369 YPK_3370 YPK_3370 YPK_3370 3696317 3696745 - conserved hypothetical protein KEGG: ypm:YP_0384 hypothetical protein gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3370 YPK_3371 YPK_3371 YPK_3371 3696742 3697308 - beta-phosphoglucomutase family hydrolase TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B beta-phosphoglucomutase family hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypi:YpsIP31758_3236 HAD hydrolase%2C IA family gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3371 YPK_3372 YPK_3372 YPK_3372 3698608 3698793 - carbon storage regulator%2C CsrA PFAM: carbon storage regulator~KEGG: plu:plu1251 carbon storage regulator homolog gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3372 YPK_3373 YPK_3373 YPK_3373 3699043 3701670 - alanyl-tRNA synthetase KEGG: yps:YPTB0825 alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: alanyl-tRNA synthetase class IIc%3B phosphoesterase DHHA1%3B Threonyl/alanyl tRNA synthetase SAD gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3373 YPK_3374 YPK_3374 YPK_3374 3701810 3702373 - regulatory protein RecX PFAM: regulatory protein RecX~KEGG: ypp:YPDSF_3055 regulatory protein gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3374 YPK_3375 YPK_3375 YPK_3375 3702759 3703829 - recA protein KEGG: ypn:YPN_0787 RecA protein~TIGRFAM: recA protein~PFAM: RecA domain protein~SMART: AAA ATPase gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3375 YPK_3376 YPK_3376 YPK_3376 3703944 3704432 - CinA domain protein PFAM: CinA domain protein~KEGG: ypi:YpsIP31758_3241 competence/damage-inducible protein CinA domain protein gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3376 YPK_3377 YPK_3377 YPK_3377 3704749 3706089 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypm:YP_0377 hypothetical protein gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3377 YPK_3378 YPK_3378 YPK_3378 3706337 3707281 + transcriptional regulator%2C DeoR family PFAM: putative sugar-binding domain protein~KEGG: ypm:YP_0376 putative transcriptional regulatory protein gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3378 YPK_3379 YPK_3379 YPK_3379 3707273 3707416 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3244 hypothetical protein gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3379 YPK_3380 YPK_3380 YPK_3380 3707503 3708927 - L-fucose isomerase-like protein PFAM: L-fucose isomerase-like-like~KEGG: ypi:YpsIP31758_3246 fucose isomerase domain protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3380 YPK_3381 YPK_3381 YPK_3381 3708948 3710435 - carbohydrate kinase FGGY PFAM: carbohydrate kinase FGGY~KEGG: ypm:YP_0374 glycerol kinase gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3381 YPK_3382 YPK_3382 YPK_3382 3710438 3711382 - Transketolase domain protein PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: ypm:YP_0373 C-terminal region of transketolase gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3382 YPK_3383 YPK_3383 YPK_3383 3711375 3712205 - Transketolase domain protein PFAM: Transketolase domain protein~KEGG: ypm:YP_0372 putative N-terminal region of transketolase gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3383 YPK_3384 YPK_3384 YPK_3384 3712451 3713596 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypm:YP_0371 putative sugar ABC transporter%2C permease protein gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3384 YPK_3385 YPK_3385 YPK_3385 3713593 3715116 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB0814 ABC sugar transporter%2C fused ATP-binding domains gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3385 YPK_3386 YPK_3386 YPK_3386 3715116 3715733 - putative lipoprotein KEGG: ypi:YpsIP31758_3252 putative lipoprotein gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3386 YPK_3387 YPK_3387 YPK_3387 3715826 3716767 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_3253 ribose ABC transporter%2C periplasmic ribose-binding protein gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3387 YPK_3388 YPK_3388 YPK_3388 3717303 3719516 + catalase/peroxidase HPI TIGRFAM: catalase/peroxidase HPI~PFAM: Haem peroxidase~KEGG: yps:YPTB0811 catalase%3B hydroperoxidase HPI(I) gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3388 YPK_3389 YPK_3389 YPK_3389 3719593 3719976 + cytochrome b562 PFAM: cytochrome b562~KEGG: ypi:YpsIP31758_3255 cytochrome b562 gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3389 YPK_3390 YPK_3390 YPK_3390 3720123 3720653 + cytochrome B561 PFAM: cytochrome B561~KEGG: ypp:YPDSF_3039 cytochrome b561 gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3390 YPK_3391 YPK_3391 YPK_3391 3720893 3721603 - cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein~KEGG: ypm:YP_0364 uncharacterized component of anaerobic dehydrogenase gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3391 YPK_3392 YPK_3392 YPK_3392 3721749 3722609 - DMSO reductase anchor subunit (DmsC) PFAM: DMSO reductase anchor subunit (DmsC)~KEGG: ypm:YP_0363 anaerobic dimethyl sulfoxide reductase subunit C gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3392 YPK_3393 YPK_3393 YPK_3393 3722611 3723228 - dimethylsulfoxide reductase%2C chain B TIGRFAM: dimethylsulfoxide reductase%2C chain B~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_3260 anaerobic dimethyl sulfoxide reductase%2C B subunit gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3393 YPK_3394 YPK_3394 YPK_3394 3723240 3725690 - anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family TIGRFAM: anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: ypi:YpsIP31758_3261 anaerobic dimethyl sulfoxide reductase%2C A subunit gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3394 YPK_3395 YPK_3395 YPK_3395 3726264 3726959 - L-ribulose-5-phosphate 4-epimerase KEGG: ypm:YP_0360 L-ribulose-5-phosphate 4-epimerase~TIGRFAM: L-ribulose-5-phosphate 4-epimerase~PFAM: class II aldolase/adducin family protein gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3395 YPK_3396 YPK_3396 YPK_3396 3727237 3727350 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3263 hypothetical protein gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3396 YPK_3397 YPK_3397 YPK_3397 3727676 3728485 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~KEGG: ypm:YP_0359 putative deoR-family regulatory protein gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3397 YPK_3398 YPK_3398 YPK_3398 3728643 3729650 + carbohydrate uptake ABC transporter 2 (CUT2) family%2C periplasmic carbohydrate-binding protein KEGG: ypi:YpsIP31758_3265 carbohydrate uptake ABC transporter 2 (CUT2) family%2C periplasmic carbohydrate-binding protein gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3398 YPK_3399 YPK_3399 YPK_3399 3729799 3731313 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: yps:YPTB0801 putative ABC sugar transporter%2C fused ATP binding domains gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3399 YPK_3400 YPK_3400 YPK_3400 3731306 3732295 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypk:y0858 putative inner membrane permease protein of ABC transport system gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3400 YPK_3401 YPK_3401 YPK_3401 3732308 3733348 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: yps:YPTB0799 putative ABC sugar transporter%2C permease subunit gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3401 YPK_3402 YPK_3402 YPK_3402 3733504 3734385 + hexulose-6-phosphate isomerase KEGG: yps:YPTB0798 putative 3-hexulose-6-phosphate isomerase~TIGRFAM: hexulose-6-phosphate isomerase~PFAM: Xylose isomerase domain protein TIM barrel gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3402 YPK_3403 YPK_3403 YPK_3403 3734396 3735892 + carbohydrate kinase FGGY PFAM: carbohydrate kinase FGGY~KEGG: ypi:YpsIP31758_3270 cryptic L-xylulose kinase gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3403 YPK_3404 YPK_3404 YPK_3404 3736290 3737933 + hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit%3B hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit~PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region%3B Fe-S type hydro-lyase tartrate/fumarate beta region~KEGG: yps:YPTB0796 fumarase A (fumarate hydratase class I)%2C aerobic isozyme gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3404 YPK_3405 YPK_3405 YPK_3405 3738116 3738367 + conserved hypothetical protein KEGG: ypm:YP_0351 hypothetical protein gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3405 YPK_3406 YPK_3406 YPK_3406 3738364 3739149 + methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: ypi:YpsIP31758_3273 methionine aminopeptidase%2C type I gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3406 YPK_3407 YPK_3407 YPK_3407 3739159 3739362 - acetyltransferase (the isoleucine patch superfamily) KEGG: ypm:YP_0349 acetyltransferase (the isoleucine patch superfamily) gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3407 YPK_3408 YPK_3408 YPK_3408 3739525 3740712 - ShET2 enterotoxin domain protein PFAM: ShET2 enterotoxin domain protein~KEGG: yps:YPTB0793 hypothetical protein gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3408 YPK_3409 YPK_3409 YPK_3409 3741154 3743250 - TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypm:YP_0347 putative outer membrane receptor gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3409 YPK_3410 YPK_3410 YPK_3410 3743422 3743673 + conserved hypothetical protein KEGG: yps:YPTB0791 hypothetical protein gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3410 YPK_3411 YPK_3411 YPK_3411 3743910 3745289 + Cytochrome-c peroxidase PFAM: Di-haem cytochrome c peroxidase~KEGG: ypi:YpsIP31758_3278 cytochrome c peroxidase gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3411 YPK_3412 YPK_3412 YPK_3412 3745360 3746124 + Arogenate dehydratase PFAM: extracellular solute-binding protein family 3~KEGG: ypi:YpsIP31758_3279 polar amino acid ABC transporter%2C periplasmic amino acid-binding protein gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3412 YPK_3413 YPK_3413 YPK_3413 3746548 3746751 + conserved hypothetical protein KEGG: ypm:YP_0343 hypothetical protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3413 YPK_3414 YPK_3414 YPK_3414 3746962 3747225 + conserved hypothetical protein KEGG: yps:YPTB0787 hypothetical protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3414 YPK_3415 YPK_3415 YPK_3415 3747472 3747813 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~KEGG: yps:YPTB0786 arsenical resistance operon repressor gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3415 YPK_3416 YPK_3416 YPK_3416 3747898 3749187 + arsenical pump membrane protein TIGRFAM: arsenical pump membrane protein~PFAM: Arsenical pump membrane protein%3B Citrate transporter~KEGG: ypi:YpsIP31758_3282 arsenical pump membrane protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3416 YPK_3417 YPK_3417 YPK_3417 3749742 3750713 + transcriptional regulator%2C DeoR family PFAM: putative sugar-binding domain protein~KEGG: ypp:YPDSF_3013 transcriptional regulatory protein gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3417 YPK_3418 YPK_3418 YPK_3418 3750834 3751508 - dihydroxyacetone kinase%2C L subunit TIGRFAM: dihydroxyacetone kinase%2C L subunit~PFAM: Dak phosphatase~KEGG: ypm:YP_0338 dihydroxyacetone kinase gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3418 YPK_3419 YPK_3419 YPK_3419 3751515 3752603 - Glycerone kinase PFAM: Dak kinase~KEGG: ypm:YP_0337 putative dihydroxyacetone kinase gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3419 YPK_3420 YPK_3420 YPK_3420 3752603 3753373 - short-chain dehydrogenase/reductase SDR PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR~KEGG: ypm:YP_0336 short chain dehydrogenase gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3420 YPK_3421 YPK_3421 YPK_3421 3753437 3754552 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ypm:YP_0335 putative zinc-binding dehydrogenase gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3421 YPK_3422 YPK_3422 YPK_3422 3755035 3755490 + sugar-phosphate isomerase%2C RpiB/LacA/LacB family TIGRFAM: sugar-phosphate isomerase%2C RpiB/LacA/LacB family%3B ribose 5-phosphate isomerase B~PFAM: Ribose/galactose isomerase~KEGG: ypm:YP_0334 ribose 5-phosphate isomerase B gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3422 YPK_3423 YPK_3423 YPK_3423 3755664 3755798 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3290 hypothetical protein gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3423 YPK_3424 YPK_3424 YPK_3424 3756295 3758850 + DNA mismatch repair protein MutS TIGRFAM: DNA mismatch repair protein MutS~PFAM: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein%3B MutS II domain protein%3B MutS IV domain protein~KEGG: ypi:YpsIP31758_3292 DNA mismatch repair protein MutS gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3424 YPK_3425 YPK_3425 YPK_3425 3759239 3760237 - RNA polymerase%2C sigma 70 subunit%2C RpoD family TIGRFAM: RNA polymerase sigma factor RpoS%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein%3B sigma-70 region 1.2~KEGG: ypi:YpsIP31758_3293 RNA polymerase sigma factor RpoS gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3425 YPK_3426 YPK_3426 YPK_3426 3760292 3761275 - peptidase M23B PFAM: Peptidoglycan-binding LysM%3B peptidase M23B~KEGG: yps:YPTB0775 lipoprotein gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3426 YPK_3427 YPK_3427 YPK_3427 3761397 3762023 - protein-L-isoaspartate O-methyltransferase KEGG: ypm:YP_0330 protein-L-isoaspartate O-methyltransferase~TIGRFAM: protein-L-isoaspartate O-methyltransferase~PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3427 YPK_3428 YPK_3428 YPK_3428 3762017 3762781 - stationary-phase survival protein SurE KEGG: ypi:YpsIP31758_3296 5'/3'-nucleotidase SurE~TIGRFAM: stationary-phase survival protein SurE~PFAM: Survival protein SurE gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3428 YPK_3429 YPK_3429 YPK_3429 3762759 3763808 - tRNA pseudouridine synthase D TruD PFAM: tRNA pseudouridine synthase D TruD~KEGG: ypi:YpsIP31758_3297 tRNA pseudouridine synthase D gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3429 YPK_3430 YPK_3430 YPK_3430 3763819 3764307 - 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase KEGG: ypm:YP_0327 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: MECDP-synthase gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3430 YPK_3431 YPK_3431 YPK_3431 3764446 3765171 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~KEGG: ypi:YpsIP31758_3299 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3431 YPK_3432 YPK_3432 YPK_3432 3765175 3765495 - Septum formation initiator PFAM: Septum formation initiator~KEGG: ypi:YpsIP31758_3300 cell division protein FtsB gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3432 YPK_3433 YPK_3433 YPK_3433 3765810 3766127 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3301 hypothetical protein gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3433 YPK_3434 YPK_3434 YPK_3434 3766318 3767022 - Adenylyl-sulfate kinase PFAM: adenylylsulfate kinase~KEGG: ypm:YP_0323 adenosine 5'-phosphosulfate kinase gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3434 YPK_3435 YPK_3435 YPK_3435 3766961 3768478 - sulfate adenylyltransferase%2C large subunit KEGG: ypm:YP_0322 ATP-sulfurylase%2C subunit 1~TIGRFAM: small GTP-binding protein%3B sulfate adenylyltransferase%2C large subunit~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3435 YPK_3436 YPK_3436 YPK_3436 3768490 3769398 - sulfate adenylyltransferase%2C small subunit TIGRFAM: sulfate adenylyltransferase%2C small subunit~PFAM: phosphoadenosine phosphosulfate reductase~KEGG: ypm:YP_0321 sulfate adenylyltransferase subunit 2 gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3436 YPK_3437 YPK_3437 YPK_3437 3769409 3770827 - uroporphyrin-III C-methyltransferase TIGRFAM: uroporphyrin-III C-methyltransferase%3B siroheme synthase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: yps:YPTB0764 siroheme synthase%2C catalyses four separate reactions required for the transformation of uroporphyrinogen III into siroheme gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3437 YPK_3438 YPK_3438 YPK_3438 3771440 3771640 + YcfA family protein PFAM: YcfA family protein~KEGG: ypm:YP_0318 hypothetical protein gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3438 YPK_3439 YPK_3439 YPK_3439 3771815 3772222 + protein of unknown function UPF0150 PFAM: protein of unknown function UPF0150~KEGG: ypi:YpsIP31758_3308 hypothetical protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3439 YPK_3440 YPK_3440 YPK_3440 3772466 3773200 - phosphoadenosine phosphosulfate reductase PFAM: phosphoadenosine phosphosulfate reductase~KEGG: ypi:YpsIP31758_3309 phosphoadenosine phosphosulfate reductase gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3440 YPK_3441 YPK_3441 YPK_3441 3773197 3774927 - sulfite reductase (NADPH) hemoprotein%2C beta-component TIGRFAM: sulfite reductase (NADPH) hemoprotein%2C beta-component~PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein%3B nitrite and sulphite reductase 4Fe-4S region~KEGG: ypi:YpsIP31758_3310 sulfite reductase (NADPH) hemoprotein%2C beta-component gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3441 YPK_3442 YPK_3442 YPK_3442 3774927 3776729 - sulfite reductase (NADPH) flavoprotein%2C alpha chain TIGRFAM: sulfite reductase [NADPH] flavoprotein%2C alpha chain~PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B FAD-binding domain protein%3B flavodoxin/nitric oxide synthase~KEGG: ypa:YPA_2870 sulfite reductase (NADPH) flavoprotein alpha-component gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3442 YPK_3443 YPK_3443 YPK_3443 3777122 3777481 + queuosine biosynthesis protein QueD TIGRFAM: queuosine biosynthesis protein QueD~PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein~KEGG: ypm:YP_0313 sulfite reductase%2C alpha subunit gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3443 YPK_3444 YPK_3444 YPK_3444 3777715 3778386 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: ypm:YP_0312 organic radical activating enzyme gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3444 YPK_3445 YPK_3445 YPK_3445 3778490 3779095 - Superoxide dismutase PFAM: superoxide dismutase copper/zinc binding~KEGG: ypm:YP_0311 superoxide dismutase [Cu-Zn] precursor gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3445 YPK_3446 YPK_3446 YPK_3446 3779467 3780762 - Phosphopyruvate hydratase PFAM: enolase~KEGG: ypi:YpsIP31758_3316 phosphopyruvate hydratase gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3446 YPK_3447 YPK_3447 YPK_3447 3780843 3782480 - CTP synthase PFAM: glutamine amidotransferase class-I%3B CTP synthase~KEGG: ypm:YP_0309 CTP synthase gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3447 YPK_3448 YPK_3448 YPK_3448 3782692 3783534 - MazG family protein TIGRFAM: MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase~KEGG: ypi:YpsIP31758_3318 MazG family protein gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3448 YPK_3449 YPK_3449 YPK_3449 3783755 3785989 - (p)ppGpp synthetase I%2C SpoT/RelA KEGG: ypi:YpsIP31758_3319 GTP pyrophosphokinase~TIGRFAM: RelA/SpoT family protein~PFAM: amino acid-binding ACT domain protein%3B TGS domain protein%3B RelA/SpoT domain protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3449 YPK_3450 YPK_3450 YPK_3450 3785999 3786124 - conserved hypothetical protein KEGG: ypk:y0810 hypothetical protein gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3450 YPK_3451 YPK_3451 YPK_3451 3786433 3789261 + multi-sensor hybrid histidine kinase PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B Hpt domain protein~KEGG: yps:YPTB0750 bifunctional multimodular BarA: sensory histidine kinase in two component regulatory system%2C activates OmpR gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3451 YPK_3452 YPK_3452 YPK_3452 3789420 3790865 - protease Do KEGG: ypi:YpsIP31758_3323 protease Do~TIGRFAM: protease Do~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3452 YPK_3453 YPK_3453 YPK_3453 3791063 3792583 - deoxyguanosinetriphosphate triphosphohydrolase KEGG: ypi:YpsIP31758_3324 deoxyguanosinetriphosphate triphosphohydrolase~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3453 YPK_3454 YPK_3454 YPK_3454 3792877 3793578 + Adenosylhomocysteine nucleosidase PFAM: purine or other phosphorylase family 1~KEGG: ypi:YpsIP31758_3325 MTA/SAH nucleosidase gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3454 YPK_3455 YPK_3455 YPK_3455 3793578 3794420 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypp:YPDSF_2973 priplasmic metal binding protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3455 YPK_3456 YPK_3456 YPK_3456 3794420 3795034 + protein of unknown function UPF0126 PFAM: protein of unknown function UPF0126~KEGG: ypm:YP_0299 hypothetical protein gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3456 YPK_3457 YPK_3457 YPK_3457 3795336 3795680 - iron-sulfur cluster assembly accessory protein TIGRFAM: iron-sulfur cluster assembly accessory protein~PFAM: HesB/YadR/YfhF-family protein~KEGG: ypi:YpsIP31758_3328 iron-sulfur cluster assembly accessory protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3457 YPK_3458 YPK_3458 YPK_3458 3795816 3797252 - Chloride channel core PFAM: Chloride channel core~KEGG: ypm:YP_0297 putative chloride channel protein gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3458 YPK_3459 YPK_3459 YPK_3459 3797612 3798892 + glutamate-1-semialdehyde-2%2C1-aminomutase TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III~KEGG: ypi:YpsIP31758_3330 glutamate-1-semialdehyde-2%2C1-aminomutase gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3459 YPK_3460 YPK_3460 YPK_3460 3799266 3801263 - transport system permease protein PFAM: transport system permease protein~KEGG: ypm:YP_0295 ferrichrome transport system permease protein FhuB gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3460 YPK_3461 YPK_3461 YPK_3461 3801260 3802312 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypk:y0797 solute-binding periplasmic protein of hydroxamate-dependent iron ABC transporter gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3461 YPK_3462 YPK_3462 YPK_3462 3802312 3803106 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0293 ferrichrome transport ATP-binding protein FhuC gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3462 YPK_3463 YPK_3463 YPK_3463 3803428 3805908 - penicillin-binding protein 1B KEGG: yps:YPTB0738 bifunctional multimodular MrcB: tglycosyl transferase of penicillin-binding protein 1b~TIGRFAM: penicillin-binding protein 1B~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3463 YPK_3464 YPK_3464 YPK_3464 3806017 3808506 - ATP-dependent helicase HrpB KEGG: ypi:YpsIP31758_3335 ATP-dependent helicase HrpB~TIGRFAM: ATP-dependent helicase HrpB~PFAM: helicase domain protein%3B helicase-associated domain protein%3B DEAD/DEAH box helicase domain protein%3B Helicase ATP-dependent domain protein~SMART: DEAD-like helicases gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3464 YPK_3465 YPK_3465 YPK_3465 3808496 3808651 - hypothetical protein gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3465 YPK_3466 YPK_3466 YPK_3466 3808661 3809236 + 2'-5' RNA ligase TIGRFAM: 2'-5' RNA ligase~PFAM: Phosphoesterase HXTX~KEGG: ypi:YpsIP31758_3336 2'-5' RNA ligase gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3466 YPK_3467 YPK_3467 YPK_3467 3809226 3810107 + sugar fermentation stimulation protein PFAM: sugar fermentation stimulation protein~KEGG: ypp:YPDSF_2960 sugar fermentation stimulation protein gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3467 YPK_3468 YPK_3468 YPK_3468 3810277 3810732 + transcriptional regulator%2C TraR/DksA family TIGRFAM: RNA polymerase-binding protein DksA~PFAM: zinc finger DksA/TraR C4-type~KEGG: ypi:YpsIP31758_3338 RNA polymerase-binding protein DksA gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3468 YPK_3469 YPK_3469 YPK_3469 3810823 3812007 + Glutamate--tRNA ligase PFAM: glutamyl-tRNA synthetase class Ic~KEGG: ypp:YPDSF_2958 glutamyl-tRNA synthetase gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3469 YPK_3470 YPK_3470 YPK_3470 3812096 3813571 + poly(A) polymerase KEGG: ypi:YpsIP31758_3340 poly(A) polymerase~TIGRFAM: poly(A) polymerase~PFAM: Polynucleotide adenylyltransferase region gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3470 YPK_3471 YPK_3471 YPK_3471 3813579 3814058 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase KEGG: ypi:YpsIP31758_3341 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3471 YPK_3472 YPK_3472 YPK_3472 3814327 3815124 + 3-methyl-2-oxobutanoate hydroxymethyltransferase KEGG: yps:YPTB0730 3-methyl-2-oxobutanoate hydroxymethyltransferase~TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3472 YPK_3473 YPK_3473 YPK_3473 3815212 3816066 + pantoate--beta-alanine ligase KEGG: ypi:YpsIP31758_3344 pantoate--beta-alanine ligase~TIGRFAM: pantoate--beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3473 YPK_3474 YPK_3474 YPK_3474 3816477 3816857 + aspartate 1-decarboxylase KEGG: ypi:YpsIP31758_3345 aspartate 1-decarboxylase~TIGRFAM: aspartate 1-decarboxylase~PFAM: aspartate decarboxylase gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3474 YPK_3475 YPK_3475 YPK_3475 3817006 3818319 - polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: ypi:YpsIP31758_3346 polysaccharide deacetylase family protein gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3475 YPK_3476 YPK_3476 YPK_3476 3818521 3819291 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ypi:YpsIP31758_3348 ABC transporter%2C permease protein gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3476 YPK_3477 YPK_3477 YPK_3477 3819288 3820214 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3349 ABC transporter%2C ATP-binding protein gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3477 YPK_3478 YPK_3478 YPK_3478 3820237 3821112 + Carbonate dehydratase PFAM: carbonic anhydrase~KEGG: ypp:YPDSF_2948 carbonic anhydrase gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3478 YPK_3479 YPK_3479 YPK_3479 3821437 3821982 - hypoxanthine phosphoribosyltransferase KEGG: ypi:YpsIP31758_3351 hypoxanthine phosphoribosyltransferase~TIGRFAM: hypoxanthine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3479 YPK_3480 YPK_3480 YPK_3480 3822193 3823794 - multicopper oxidase type 3 PFAM: multicopper oxidase type 1%3B multicopper oxidase type 2%3B multicopper oxidase type 3~KEGG: yps:YPTB0722 conserved cupredoxin-like protein gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3480 YPK_3481 YPK_3481 YPK_3481 3824111 3824458 + conserved hypothetical protein KEGG: ypm:YP_0275 hypothetical protein gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3481 YPK_3482 YPK_3482 YPK_3482 3824575 3825465 + spermidine synthase TIGRFAM: spermidine synthase~PFAM: Spermine synthase~KEGG: ypi:YpsIP31758_3354 spermidine synthase gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3482 YPK_3483 YPK_3483 YPK_3483 3825543 3826337 + S-adenosylmethionine decarboxylase proenzyme KEGG: ypm:YP_0273 S-adenosylmethionine decarboxylase proenzyme~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3483 YPK_3484 YPK_3484 YPK_3484 3826607 3826759 - hypothetical protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3484 YPK_3485 YPK_3485 YPK_3485 3826775 3827662 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: yps:YPTB0718 putative DMT superfamily drug efflux pump gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3485 YPK_3486 YPK_3486 YPK_3486 3827773 3828132 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_3358 hypothetical protein gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3486 YPK_3487 YPK_3487 YPK_3487 3828450 3831047 - aconitate hydratase 2 TIGRFAM: aconitate hydratase 2~PFAM: aconitate hydratase domain protein%3B Aconitase B%2C N-terminal~KEGG: ypm:YP_0270 aconitate hydratase 2 gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3487 YPK_3488 YPK_3488 YPK_3488 3831618 3832076 - transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypa:YPA_1072 transposase for the IS1541 insertion element gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3488 YPK_3489 YPK_3489 YPK_3489 3832318 3833742 - dihydrolipoamide dehydrogenase TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B glucose-inhibited division protein A%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~KEGG: ypi:YpsIP31758_3360 dihydrolipoamide dehydrogenase gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3489 YPK_3490 YPK_3490 YPK_3490 3834048 3835634 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase KEGG: ypi:YpsIP31758_3362 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase~TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase~PFAM: biotin/lipoyl attachment domain-containing protein%3B catalytic domain of components of various dehydrogenase complexes%3B E3 binding domain protein gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3490 YPK_3491 YPK_3491 YPK_3491 3835648 3838311 - 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type~KEGG: ypi:YpsIP31758_3363 pyruvate dehydrogenase%2C E1 component gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3491 YPK_3492 YPK_3492 YPK_3492 3838507 3839271 - GntR domain protein PFAM: regulatory protein GntR HTH%3B GntR domain protein~KEGG: ypi:YpsIP31758_3364 pyruvate dehydrogenase complex repressor gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3492 YPK_3493 YPK_3493 YPK_3493 3840034 3840141 + hypothetical protein gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3493 YPK_3494 YPK_3494 YPK_3494 3840134 3841531 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: yps:YPTB0711 APC family%2C aromatic amino acid transporter gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3494 YPK_3495 YPK_3495 YPK_3495 3841949 3842803 - signaling modulator of AmpD%2C AmpE KEGG: ypm:YP_0262 putative membrane-bound sensory transducer in beta-lactamase regulation gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3495 YPK_3496 YPK_3496 YPK_3496 3843076 3843627 - N-acetylmuramyl-L-alanine amidase%2C negative regulator of AmpC%2C AmpD PFAM: N-acetylmuramoyl-L-alanine amidase family 2~KEGG: ypm:YP_0261 putative signalling protein in beta-lactamase regulation gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3496 YPK_3497 YPK_3497 YPK_3497 3843740 3844648 + nicotinate-nucleotide pyrophosphorylase KEGG: ypm:YP_0260 quinolinate phosphoribosyltransferase~TIGRFAM: nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3497 YPK_3498 YPK_3498 YPK_3498 3844851 3845315 + putative prepilin peptidase dependent protein D precursor KEGG: ypm:YP_0259 putative prepilin peptidase dependent protein D precursor gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3498 YPK_3499 YPK_3499 YPK_3499 3845308 3846846 + type II secretion system protein E PFAM: type II secretion system protein E~KEGG: ypi:YpsIP31758_3371 putative protein transport protein HofB gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3499 YPK_3500 YPK_3500 YPK_3500 3846906 3848042 + type II secretion system protein PFAM: type II secretion system protein~KEGG: ypi:YpsIP31758_3372 putative protein transport protein HofC gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3500 YPK_3501 YPK_3501 YPK_3501 3848518 3849561 - guanosine monophosphate reductase TIGRFAM: guanosine monophosphate reductase~PFAM: IMP dehydrogenase/GMP reductase~KEGG: ypm:YP_0256 GMP reductase gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3501 YPK_3502 YPK_3502 YPK_3502 3849647 3849847 + conserved hypothetical protein KEGG: ypm:YP_0255 hypothetical protein gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3502 YPK_3503 YPK_3503 YPK_3503 3849857 3850477 + dephospho-CoA kinase KEGG: ypm:YP_0254 dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3503 YPK_3504 YPK_3504 YPK_3504 3850474 3851226 + protein of unknown function DUF1342 PFAM: protein of unknown function DUF1342~KEGG: yps:YPTB0701 hypothetical protein gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3504 YPK_3505 YPK_3505 YPK_3505 3851434 3851640 + protein of unknown function DUF329 PFAM: protein of unknown function DUF329~KEGG: ypi:YpsIP31758_3376 zinc-binding protein YacG gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3505 YPK_3506 YPK_3506 YPK_3506 3851831 3852289 - transposase IS200-family protein PFAM: transposase IS200-family protein~KEGG: ypi:YpsIP31758_3905 IS1541%2C transposase gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3506 YPK_3507 YPK_3507 YPK_3507 3852279 3852467 - conserved hypothetical protein KEGG: ypa:YPA_3535 hypothetical protein gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3507 YPK_3508 YPK_3508 YPK_3508 3852504 3852890 - mutator MutT protein TIGRFAM: mutator MutT protein~PFAM: NUDIX hydrolase~KEGG: ypm:YP_3619 mutator protein MutT gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3508 YPK_3509 YPK_3509 YPK_3509 3853185 3855899 - preprotein translocase%2C SecA subunit TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SEC-C motif domain protein%3B SecA DEAD domain protein%3B SecA Wing and Scaffold%3B SecA preprotein cross-linking region~KEGG: ypi:YpsIP31758_3378 preprotein translocase%2C SecA subunit gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3509 YPK_3510 YPK_3510 YPK_3510 3855977 3856441 - secretion monitor family proten PFAM: secretion monitor family proten~KEGG: ypi:YpsIP31758_3379 secretion monitor protein SecM gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3510 YPK_3511 YPK_3511 YPK_3511 3856539 3857063 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3380 hypothetical protein gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3511 YPK_3512 YPK_3512 YPK_3512 3857320 3858243 - UDP-3-0-acyl N-acetylglucosamine deacetylase PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase~KEGG: yps:YPTB0694 UDP-3-O-acyl N-acetylglucosamine deacetylase gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3512 YPK_3513 YPK_3513 YPK_3513 3858340 3859491 - cell division protein FtsZ TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ domain protein~KEGG: ypk:y3621 tubulin-like GTP-binding protein and GTPase gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3513 YPK_3514 YPK_3514 YPK_3514 3859564 3860820 - cell division protein FtsA PFAM: cell division protein FtsA~KEGG: yen:YE0676 cell division protein FtsA gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3514 YPK_3515 YPK_3515 YPK_3515 3860883 3861674 - Polypeptide-transport-associated domain protein FtsQ-type PFAM: cell division protein FtsQ%3B Polypeptide-transport-associated domain protein FtsQ-type~KEGG: ypi:YpsIP31758_3384 cell division protein FtsQ gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3515 YPK_3516 YPK_3516 YPK_3516 3861676 3862596 - D-alanine--D-alanine ligase KEGG: ypm:YP_3627 D-alanine--D-alanine ligase B~TIGRFAM: D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase domain protein gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3516 YPK_3517 YPK_3517 YPK_3517 3862589 3864091 - UDP-N-acetylmuramate--alanine ligase TIGRFAM: UDP-N-acetylmuramate--alanine ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: ypm:YP_3628 UDP-N-acetyl-muramate:alanine ligase gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3517 YPK_3518 YPK_3518 YPK_3518 3864202 3865272 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase KEGG: ypi:YpsIP31758_3387 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: glycosyl transferase family 28%3B Glycosyltransferase 28 domain gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3518 YPK_3519 YPK_3519 YPK_3519 3865269 3866471 - cell division protein FtsW TIGRFAM: cell division protein FtsW~PFAM: cell cycle protein~KEGG: ypm:YP_3630 cell division protein FtsW gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3519 YPK_3520 YPK_3520 YPK_3520 3866471 3867787 - UDP-N-acetylmuramoylalanine--D-glutamate ligase TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: ypi:YpsIP31758_3389 UDP-N-acetylmuramoylalanine--D-glutamate ligase gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3520 YPK_3521 YPK_3521 YPK_3521 3867790 3868872 - phospho-N-acetylmuramoyl-pentapeptide-transferase KEGG: ypm:YP_3632 phospho-N-acetylmuramoyl-pentapeptide- transferase~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: glycosyl transferase family 4 gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3521 YPK_3522 YPK_3522 YPK_3522 3868866 3870242 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: ypi:YpsIP31758_3391 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3522 YPK_3523 YPK_3523 YPK_3523 3870239 3871726 - UDP-N-acetylmuramyl-tripeptide synthetase TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: ypi:YpsIP31758_3392 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3523 YPK_3524 YPK_3524 YPK_3524 3871713 3873476 - Peptidoglycan glycosyltransferase PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain~KEGG: ypi:YpsIP31758_3393 penicillin-binding protein gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3524 YPK_3525 YPK_3525 YPK_3525 3873542 3873859 - cell division protein FtsL PFAM: cell division protein FtsL~KEGG: ypi:YpsIP31758_3394 cell division protein FtsL gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3525 YPK_3526 YPK_3526 YPK_3526 3873856 3874818 - S-adenosyl-methyltransferase MraW TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: methyltransferase~KEGG: ypm:YP_3637 predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3526 YPK_3527 YPK_3527 YPK_3527 3874821 3875279 - MraZ protein TIGRFAM: MraZ protein~PFAM: protein of unknown function UPF0040~KEGG: ypi:YpsIP31758_3396 MraZ protein gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3527 YPK_3528 YPK_3528 YPK_3528 3876381 3876821 + protein of unknown function DUF1144 PFAM: protein of unknown function DUF1144~KEGG: ypm:YP_3639 hypothetical protein gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3528 YPK_3529 YPK_3529 YPK_3529 3876952 3877962 - transcriptional regulator%2C LacI family TIGRFAM: D-fructose-responsive transcription factor~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypi:YpsIP31758_3399 D-fructose-responsive transcription factor gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3529 YPK_3530 YPK_3530 YPK_3530 3878413 3878907 - acetolactate synthase%2C small subunit TIGRFAM: acetolactate synthase%2C small subunit~PFAM: amino acid-binding ACT domain protein~KEGG: ypi:YpsIP31758_3400 acetolactate synthase%2C small subunit gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3530 YPK_3531 YPK_3531 YPK_3531 3878910 3880637 - acetolactate synthase%2C large subunit%2C biosynthetic type KEGG: ypm:YP_3646 acetolactate synthase isozyme III large subunit~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3531 YPK_3532 YPK_3532 YPK_3532 3881097 3882902 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ypi:YpsIP31758_3402 AMP binding protein gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3532 YPK_3533 YPK_3533 YPK_3533 3883477 3884433 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_3403 substrate-binding transcriptional regulator%2C LysR family gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3533 YPK_3534 YPK_3534 YPK_3534 3885110 3885325 + conserved hypothetical protein KEGG: ypm:YP_3642 hypothetical protein gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3534 YPK_3535 YPK_3535 YPK_3535 3885648 3887210 + 2-isopropylmalate synthase TIGRFAM: 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain~KEGG: ypi:YpsIP31758_3405 2-isopropylmalate synthase gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3535 YPK_3536 YPK_3536 YPK_3536 3887213 3888304 + 3-isopropylmalate dehydrogenase KEGG: ypm:YP_3650 3-isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3536 YPK_3537 YPK_3537 YPK_3537 3888306 3889736 + 3-isopropylmalate dehydratase%2C large subunit KEGG: ypm:YP_3651 3-isopropylmalate isomerase (dehydratase) subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: aconitate hydratase domain protein gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3537 YPK_3538 YPK_3538 YPK_3538 3889751 3890353 + 3-isopropylmalate dehydratase%2C small subunit KEGG: ypm:YP_3652 3-isopropylmalate dehydratase small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain protein gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3538 YPK_3539 YPK_3539 YPK_3539 3890594 3891775 - sugar efflux transporter TIGRFAM: sugar efflux transporter~PFAM: major facilitator superfamily MFS_1~KEGG: yps:YPTB0668 MFS family transporter%2C sugar efflux pump gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3539 YPK_3540 YPK_3540 YPK_3540 3892439 3894100 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ypi:YpsIP31758_3411 sugar transport-related sRNA gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3540 YPK_3541 YPK_3541 YPK_3541 3894191 3894484 - conserved hypothetical protein KEGG: ypm:YP_3656 hypothetical protein gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3541 YPK_3542 YPK_3542 YPK_3542 3894955 3896031 + thiamine ABC transporter%2C periplasmic binding protein TIGRFAM: ABC transporter%2C periplasmic binding protein%2C thiB subfamily%3B thiamine ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: ypp:YPDSF_3112 thiamine-binding periplasmic protein gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3542 YPK_3543 YPK_3543 YPK_3543 3896007 3897614 + thiamine ABC transporter%2C inner membrane subunit TIGRFAM: thiamine ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_3658 putative transport gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3543 YPK_3544 YPK_3544 YPK_3544 3897601 3898311 + ABC transporter%2C ATPase subunit%2C ThiQ subfamily KEGG: ypi:YpsIP31758_3416 thiamine ABC transporter%2C ATP-binding protein~TIGRFAM: ABC transporter%2C ATPase subunit%2C ThiQ subfamily~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3544 YPK_3545 YPK_3545 YPK_3545 3898380 3899147 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ypm:YP_3660 putative DedA-family membrane protein gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3545 YPK_3546 YPK_3546 YPK_3546 3899343 3901712 + DNA polymerase B region PFAM: DNA polymerase B exonuclease%3B DNA polymerase B region~SMART: DNA-directed DNA polymerase B~KEGG: yps:YPTB0659 DNA polymerase II and and 3'--> 5' exonuclease gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3546 YPK_3547 YPK_3547 YPK_3547 3902173 3905079 + SNF2-related protein PFAM: SNF2-related protein%3B helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_3419 RNA polymerase-associated protein RapA gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3547 YPK_3548 YPK_3548 YPK_3548 3905041 3905187 - hypothetical protein gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3548 YPK_3549 YPK_3549 YPK_3549 3905334 3905687 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3420 hypothetical protein gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3549 YPK_3550 YPK_3550 YPK_3550 3905709 3909203 - type VI secretion protein IcmF TIGRFAM: type VI secretion protein IcmF~PFAM: ImcF domain protein%3B protein of unknown function DUF1215~KEGG: yps:YPTB0656 hypothetical protein gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3550 YPK_3551 YPK_3551 YPK_3551 3909212 3910822 - type IV / VI secretion system protein%2C DotU family TIGRFAM: type IV / VI secretion system protein%2C DotU family~PFAM: OmpA/MotB domain protein~KEGG: ypm:YP_3665 hypothetical protein gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3551 YPK_3552 YPK_3552 YPK_3552 3910819 3912174 - type VI secretion protein%2C VC_A0114 family TIGRFAM: type VI secretion protein%2C VC_A0114 family~PFAM: protein of unknown function DUF876~KEGG: ypm:YP_3666 hypothetical protein gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3552 YPK_3553 YPK_3553 YPK_3553 3912294 3912785 - putative lipoprotein KEGG: ypi:YpsIP31758_3424 putative lipoprotein gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3553 YPK_3554 YPK_3554 YPK_3554 3912778 3913143 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3425 hypothetical protein gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3554 YPK_3555 YPK_3555 YPK_3555 3913149 3913766 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3426 hypothetical protein gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3555 YPK_3556 YPK_3556 YPK_3556 3913759 3914862 - pentapeptide repeat protein PFAM: pentapeptide repeat protein~KEGG: ypm:YP_3670 uncharacterized low-complexity proteins gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3556 YPK_3557 YPK_3557 YPK_3557 3914888 3917107 - pentapeptide repeat protein PFAM: pentapeptide repeat protein~KEGG: ypi:YpsIP31758_3428 pentapeptide repeat protein gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3557 YPK_3558 YPK_3558 YPK_3558 3917120 3919468 - type VI secretion system Vgr family protein TIGRFAM: type VI secretion system Vgr family protein~PFAM: Rhs element Vgr protein~KEGG: yps:YPTB0648 hypothetical protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3558 YPK_3559 YPK_3559 YPK_3559 3919572 3922160 - type VI secretion ATPase%2C ClpV1 family KEGG: ypi:YpsIP31758_3430 ATPase%2C AAA family~TIGRFAM: type VI secretion ATPase%2C ClpV1 family~PFAM: AAA ATPase central domain protein%3B Clp domain protein%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3559 YPK_3560 YPK_3560 YPK_3560 3922178 3923161 - type VI secretion protein%2C VC_A0111 family TIGRFAM: type VI secretion protein%2C VC_A0111 family~PFAM: protein of unknown function DUF1305~KEGG: ypi:YpsIP31758_3431 hypothetical protein gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3560 YPK_3561 YPK_3561 YPK_3561 3923154 3924998 - type VI secretion protein%2C VC_A0110 family TIGRFAM: type VI secretion protein%2C VC_A0110 family~PFAM: protein of unknown function DUF879~KEGG: ypi:YpsIP31758_3432 hypothetical protein gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3561 YPK_3562 YPK_3562 YPK_3562 3925031 3925474 - type VI secretion system lysozyme-related protein TIGRFAM: type VI secretion system lysozyme-related protein~PFAM: GPW/gp25 family protein~KEGG: ypi:YpsIP31758_3433 hypothetical protein gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3562 YPK_3563 YPK_3563 YPK_3563 3925548 3926066 - protein of unknown function DUF796 PFAM: protein of unknown function DUF796~KEGG: ypi:YpsIP31758_3434 hypothetical protein gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3563 YPK_3564 YPK_3564 YPK_3564 3926229 3927740 - type VI secretion protein%2C EvpB/VC_A0108 family TIGRFAM: type VI secretion protein%2C EvpB/VC_A0108 family~PFAM: protein of unknown function DUF877~KEGG: yps:YPTB0642 hypothetical protein gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3564 YPK_3565 YPK_3565 YPK_3565 3927740 3928300 - type VI secretion protein%2C VC_A0107 family TIGRFAM: type VI secretion protein%2C VC_A0107 family~PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_3436 hypothetical protein gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3565 YPK_3566 YPK_3566 YPK_3566 3928311 3929297 - ImpA domain protein KEGG: ypi:YpsIP31758_3437 ImpA domain protein gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3566 YPK_3567 YPK_3567 YPK_3567 3929654 3930397 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3438 hypothetical protein gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3567 YPK_3568 YPK_3568 YPK_3568 3931620 3932240 + pseudouridine synthase PFAM: pseudouridine synthase~KEGG: ypm:YP_3682 ribosomal large subunit pseudouridine synthase A gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3568 YPK_3569 YPK_3569 YPK_3569 3932557 3933390 - heat shock protein DnaJ domain protein PFAM: heat shock protein DnaJ domain protein~KEGG: ypm:YP_3683 DnaJ-like protein gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3569 YPK_3570 YPK_3570 YPK_3570 3933665 3935917 + Organic solvent tolerance protein PFAM: OstA family protein%3B Organic solvent tolerance protein~KEGG: ypi:YpsIP31758_3441 organic solvent tolerance protein gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3570 YPK_3571 YPK_3571 YPK_3571 3935985 3937289 + SurA domain PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase%3B SurA domain~KEGG: ypi:YpsIP31758_3442 chaperone SurA gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3571 YPK_3572 YPK_3572 YPK_3572 3937273 3938268 + 4-hydroxythreonine-4-phosphate dehydrogenase KEGG: ypi:YpsIP31758_3443 4-hydroxythreonine-4-phosphate dehydrogenase~TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate biosynthetic protein PdxA gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3572 YPK_3573 YPK_3573 YPK_3573 3938261 3939079 + dimethyladenosine transferase TIGRFAM: dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase~KEGG: ypi:YpsIP31758_3444 dimethyladenosine transferase gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3573 YPK_3574 YPK_3574 YPK_3574 3939093 3939470 + ApaG domain protein PFAM: ApaG domain protein~KEGG: ypi:YpsIP31758_3445 ApaG protein gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3574 YPK_3575 YPK_3575 YPK_3575 3939487 3940356 + bis(5'nucleosyl)-tetraphosphatase%2C ApaH KEGG: yps:YPTB0631 diadenosinetetraphosphatase~TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical)~PFAM: metallophosphoesterase gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3575 YPK_3576 YPK_3576 YPK_3576 3940446 3940910 - conserved hypothetical protein KEGG: yps:YPTB0630 hypothetical protein gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3576 YPK_3577 YPK_3577 YPK_3577 3941038 3941259 - conserved hypothetical protein KEGG: ypn:YPN_0362 hypothetical protein gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3577 YPK_3578 YPK_3578 YPK_3578 3941750 3942232 - Dihydrofolate reductase PFAM: dihydrofolate reductase region~KEGG: ypi:YpsIP31758_3449 dihydrofolate reductase gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3578 YPK_3579 YPK_3579 YPK_3579 3942382 3942846 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3450 hypothetical protein gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3579 YPK_3580 YPK_3580 YPK_3580 3942843 3943643 - protein of unknown function DUF1212 PFAM: protein of unknown function DUF1212~KEGG: yps:YPTB0626 putative transmembrane protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3580 YPK_3581 YPK_3581 YPK_3581 3943905 3944573 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ypp:YPDSF_3150 LysE type translocator gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3581 YPK_3582 YPK_3582 YPK_3582 3944799 3948032 - carbamoyl-phosphate synthase%2C large subunit TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain oligomerisation%3B Carbamoyl-phosphate synthetase large chain domain protein%3B MGS domain protein~KEGG: ypi:YpsIP31758_3453 carbamoyl-phosphate synthase%2C large subunit gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3582 YPK_3583 YPK_3583 YPK_3583 3948048 3949223 - carbamoyl-phosphate synthase%2C small subunit TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: glutamine amidotransferase class-I%3B Carbamoyl-phosphate synthase small chain~KEGG: ypm:YP_3698 carbamoyl-phosphate synthase small chain gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3583 YPK_3584 YPK_3584 YPK_3584 3949696 3950517 - Dihydrodipicolinate reductase PFAM: dihydrodipicolinate reductase~KEGG: ypm:YP_3699 dihydrodipicolinate reductase gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3584 YPK_3585 YPK_3585 YPK_3585 3951173 3952126 - hydroxymethylbutenyl pyrophosphate reductase KEGG: yps:YPTB0620 regulates the activity of guanosine 3'%2C5'-bispyrophosphate synthetase I (RelA)~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: LytB protein gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3585 YPK_3586 YPK_3586 YPK_3586 3952107 3952631 - peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: ypp:YPDSF_3155 FKBP-type peptidyl-prolyl cis-trans isomerase gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3586 YPK_3587 YPK_3587 YPK_3587 3952633 3953142 - lipoprotein signal peptidase KEGG: ypm:YP_3704 FKBP-type peptidyl-prolyl cis-trans isomerase~TIGRFAM: lipoprotein signal peptidase~PFAM: peptidase A8 signal peptidase II gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3587 YPK_3588 YPK_3588 YPK_3588 3953142 3955958 - isoleucyl-tRNA synthetase TIGRFAM: isoleucyl-tRNA synthetase~KEGG: ypm:YP_3705 isoleucyl-tRNA synthetase gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3588 YPK_3589 YPK_3589 YPK_3589 3955990 3956928 - riboflavin biosynthesis protein RibF KEGG: ypm:YP_3706 riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase)~TIGRFAM: riboflavin biosynthesis protein RibF~PFAM: cytidylyltransferase%3B FAD synthetase%3B Riboflavin kinase gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3589 YPK_3590 YPK_3590 YPK_3590 3957343 3957606 + ribosomal protein S20 PFAM: ribosomal protein S20~KEGG: ypi:YpsIP31758_3462 ribosomal protein S20 gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3590 YPK_3591 YPK_3591 YPK_3591 3957737 3958636 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypm:YP_3709 transcriptional activator protein NhaR gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3591 YPK_3592 YPK_3592 YPK_3592 3958766 3959950 - Na+/H+ antiporter NhaA PFAM: Na+/H+ antiporter NhaA~KEGG: yps:YPTB0613 NhaA family of transport protein%2C Na+/H antiporter gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3592 YPK_3593 YPK_3593 YPK_3593 3960193 3961332 - chaperone protein DnaJ TIGRFAM: chaperone protein DnaJ~PFAM: DnaJ central domain protein%3B heat shock protein DnaJ domain protein%3B chaperone DnaJ domain protein~KEGG: ypm:YP_3711 chaperone protein DnaJ gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3593 YPK_3594 YPK_3594 YPK_3594 3961444 3963354 - chaperone protein DnaK KEGG: yps:YPTB0611 chaperone Hsp70 in DNA biosynthesis/cell division~TIGRFAM: chaperone protein DnaK~PFAM: Heat shock protein 70 gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3594 YPK_3595 YPK_3595 YPK_3595 3963728 3964339 + GPR1/FUN34/yaaH family protein PFAM: GPR1/FUN34/yaaH family protein~KEGG: ypk:y3707 hypothetical protein gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3595 YPK_3596 YPK_3596 YPK_3596 3964629 3967085 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypp:YPDSF_3165 hypothetical protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3596 YPK_3597 YPK_3597 YPK_3597 3967155 3968543 - major facilitator superfamily MFS_1 PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: ypp:YPDSF_3166 transport protein gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3597 YPK_3598 YPK_3598 YPK_3598 3968671 3969258 - molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain~KEGG: ypm:YP_3716 molybdopterin biosynthesis protein gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3598 YPK_3599 YPK_3599 YPK_3599 3969546 3970499 - transaldolase KEGG: ypm:YP_3718 transaldolase B~TIGRFAM: transaldolase~PFAM: Transaldolase gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3599 YPK_3600 YPK_3600 YPK_3600 3971031 3971807 + protein of unknown function DUF328 PFAM: protein of unknown function DUF328~KEGG: ypm:YP_3720 hypothetical protein gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3600 YPK_3601 YPK_3601 YPK_3601 3972239 3972349 - hypothetical protein gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3601 YPK_3602 YPK_3602 YPK_3602 3972624 3973913 - threonine synthase KEGG: ypm:YP_3721 threonine synthase~TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3602 YPK_3603 YPK_3603 YPK_3603 3973917 3974846 - homoserine kinase TIGRFAM: homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~KEGG: ypm:YP_3722 homoserine kinase gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3603 YPK_3604 YPK_3604 YPK_3604 3974849 3977308 - aspartate kinase KEGG: ypi:YpsIP31758_3476 bifunctional aspartokinase/homoserine dehydrogenase I~TIGRFAM: aspartate kinase~PFAM: aspartate/glutamate/uridylate kinase%3B homoserine dehydrogenase%3B amino acid-binding ACT domain protein%3B homoserine dehydrogenase NAD-binding gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3604 YPK_3605 YPK_3605 YPK_3605 3977746 3977853 - hypothetical protein gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3605 YPK_3606 YPK_3606 YPK_3606 3978411 3979127 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_3725 aerobic respiration control protein gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3606 YPK_3607 YPK_3607 YPK_3607 3979301 3979768 - CreA family protein PFAM: CreA family protein~KEGG: ypi:YpsIP31758_3479 CreA protein gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3607 YPK_3608 YPK_3608 YPK_3608 3979765 3979950 - hypothetical protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3608 YPK_3609 YPK_3609 YPK_3609 3979994 3980860 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B transcription activator effector binding~KEGG: ypm:YP_3727 putative right origin-binding protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3609 YPK_3610 YPK_3610 YPK_3610 3980857 3981504 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: ypm:YP_3728 putative phosphoglycerate mutase gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3610 YPK_3611 YPK_3611 YPK_3611 3981614 3982156 + protein of unknown function DUF84 PFAM: protein of unknown function DUF84~KEGG: yps:YPTB0597 hypothetical protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3611 YPK_3612 YPK_3612 YPK_3612 3982153 3982545 - Trp operon repressor TIGRFAM: trp operon repressor~PFAM: Trp repressor~KEGG: ypp:YPDSF_3181 Trp operon repressor gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3612 YPK_3613 YPK_3613 YPK_3613 3982782 3984701 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: ypi:YpsIP31758_3484 putative soluble lytic murein transglycosylase gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3613 YPK_3614 YPK_3614 YPK_3614 3985271 3987997 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase%3B E1-E2 ATPase-associated domain protein~KEGG: ypi:YpsIP31758_3485 cation-transporting ATPase%2C P-type%2C HAD superfamily%2C subfamily IC gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3614 YPK_3615 YPK_3615 YPK_3615 3988372 3988995 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3486 hypothetical protein gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3615 YPK_3616 YPK_3616 YPK_3616 3988992 3990302 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B histidine kinase HAMP region domain protein~KEGG: ypp:YPDSF_3185 hypothetical protein gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3616 YPK_3617 YPK_3617 YPK_3617 3990308 3990814 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: ypi:YpsIP31758_3488 OmpA family protein gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3617 YPK_3618 YPK_3618 YPK_3618 3990997 3992664 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3489 ABC transporter%2C ATP-binding protein gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3618 YPK_3619 YPK_3619 YPK_3619 3992810 3993940 - filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: ypi:YpsIP31758_3490 Fic family protein gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3619 YPK_3620 YPK_3620 YPK_3620 3994097 3995368 - transcriptional regulator%2C XRE family TIGRFAM: cytidyltransferase-related domain protein%3B nicotinamide-nucleotide adenylyltransferase~PFAM: helix-turn-helix domain protein~KEGG: yps:YPTB0588 transcriptional regulator NadR gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3620 YPK_3621 YPK_3621 YPK_3621 3995527 3996909 - DNA repair protein RadA KEGG: ypm:YP_3739 DNA repair protein RadA~TIGRFAM: DNA repair protein RadA~SMART: AAA ATPase gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3621 YPK_3622 YPK_3622 YPK_3622 3997013 3997993 - phosphoserine phosphatase SerB KEGG: ypm:YP_3740 phosphoserine phosphatase~TIGRFAM: phosphoserine phosphatase SerB%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)~PFAM: Haloacid dehalogenase domain protein hydrolase%3B Haloacid dehalogenase domain protein hydrolase type 3 gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3622 YPK_3623 YPK_3623 YPK_3623 3998285 3998986 + putative membrane protein Smp KEGG: ypi:YpsIP31758_3494 putative membrane protein Smp gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3623 YPK_3624 YPK_3624 YPK_3624 3999098 3999817 - purine nucleoside phosphorylase TIGRFAM: purine nucleoside phosphorylase~PFAM: purine or other phosphorylase family 1~KEGG: ypi:YpsIP31758_3495 purine nucleoside phosphorylase gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3624 YPK_3625 YPK_3625 YPK_3625 3999942 4001165 - phosphopentomutase KEGG: ypi:YpsIP31758_3496 phosphopentomutase~TIGRFAM: phosphopentomutase~PFAM: metalloenzyme domain protein%3B Phosphopentomutase domain protein gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3625 YPK_3626 YPK_3626 YPK_3626 4001297 4002619 - thymidine phosphorylase KEGG: ypi:YpsIP31758_3497 thymidine phosphorylase~TIGRFAM: pyrimidine-nucleoside phosphorylase%3B thymidine phosphorylase~PFAM: glycosyl transferase family 3%3B Pyrimidine nucleoside phosphorylase domain gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3626 YPK_3627 YPK_3627 YPK_3627 4002740 4003537 - deoxyribose-phosphate aldolase KEGG: ypm:YP_3745 deoxyribose-phosphate aldolase~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3627 YPK_3628 YPK_3628 YPK_3628 4004158 4005429 - nucleoside transporter TIGRFAM: nucleoside transporter~PFAM: Na+ dependent nucleoside transporter%3B nucleoside recognition domain protein%3B Na+ dependent nucleoside transporter domain protein~KEGG: ypi:YpsIP31758_3499 nucleoside transporter%2C NupC family gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3628 YPK_3629 YPK_3629 YPK_3629 4005964 4006773 - TatD-related deoxyribonuclease PFAM: TatD-related deoxyribonuclease~KEGG: ypm:YP_3747 putative metalloenzyme gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3629 YPK_3630 YPK_3630 YPK_3630 4006789 4008063 - Patatin PFAM: Patatin~KEGG: ypm:YP_3748 predicted esterase of the alpha-beta hydrolase superfamily gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3630 YPK_3631 YPK_3631 YPK_3631 4008140 4008301 - protein of unknown function DUF1328 PFAM: protein of unknown function DUF1328~KEGG: ypi:YpsIP31758_3502 hypothetical protein gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3631 YPK_3632 YPK_3632 YPK_3632 4008468 4009082 - transport-associated PFAM: transport-associated~SMART: Transport-associated and nodulation region~KEGG: ypi:YpsIP31758_3503 osmotically induced periplasmic protein OsmY gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3632 YPK_3633 YPK_3633 YPK_3633 4009410 4010999 - peptide chain release factor 3 TIGRFAM: peptide chain release factor 3%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein~KEGG: ypi:YpsIP31758_3504 peptide chain release factor 3 gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3633 YPK_3634 YPK_3634 YPK_3634 4011177 4011620 - ribosomal-protein-alanine acetyltransferase KEGG: ypi:YpsIP31758_3505 ribosomal-protein-alanine acetyltransferase~TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3634 YPK_3635 YPK_3635 YPK_3635 4011565 4012002 - DNA polymerase III psi subunit PFAM: DNA polymerase III psi subunit~KEGG: ypi:YpsIP31758_3506 DNA polymerase III%2C psi subunit gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3635 YPK_3636 YPK_3636 YPK_3636 4012115 4013158 + rRNA (guanine-N(2)-)-methyltransferase PFAM: methyltransferase small%3B Methyltransferase small domain protein~KEGG: ypm:YP_3754 ribosomal RNA small subunit methyltransferase C gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3636 YPK_3637 YPK_3637 YPK_3637 4014027 4014365 - protein of unknown function DUF1435 PFAM: protein of unknown function DUF1435~KEGG: ypm:YP_3755 permeases of the major facilitator superfamily gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3637 YPK_3638 YPK_3638 YPK_3638 4014632 4015768 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: ypi:YpsIP31758_3509 diguanylate cyclase (GGDEF) domain protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3638 YPK_3639 YPK_3639 YPK_3639 4016327 4017412 - Pectinesterase PFAM: Pectinesterase~KEGG: yps:YPTB0569 pectinesterase A precursor (pectin methylesterase A) gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3639 YPK_3640 YPK_3640 YPK_3640 4017805 4018068 + conserved hypothetical protein KEGG: ypn:YPN_0293 hypothetical protein gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3640 YPK_3641 YPK_3641 YPK_3641 4018215 4018547 + conserved hypothetical protein KEGG: yps:YPTB0567 hypothetical protein gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3641 YPK_3642 YPK_3642 YPK_3642 4018908 4021994 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: ypi:YpsIP31758_3512 transporter%2C AcrB/AcrD/AcrF family gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3642 YPK_3643 YPK_3643 YPK_3643 4021994 4023076 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: ype:YPO0420 putative lipoprotein gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3643 YPK_3644 YPK_3644 YPK_3644 4023128 4023361 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3514 hypothetical protein gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3644 YPK_3645 YPK_3645 YPK_3645 4023936 4024049 - hypothetical protein gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3645 YPK_3646 YPK_3646 YPK_3646 4024171 4025403 - O-antigen polymerase PFAM: O-antigen polymerase~KEGG: ypm:YP_3764 putative O-antigen biosynthesis protein gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3646 YPK_3647 YPK_3647 YPK_3647 4025451 4026644 - lipopolysaccharide heptosyltransferase III TIGRFAM: lipopolysaccharide heptosyltransferase III~PFAM: glycosyl transferase family 9~KEGG: ypp:YPDSF_3215 lipopolysaccharide core biosynthesis protein gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3647 YPK_3648 YPK_3648 YPK_3648 4026960 4028552 - carbohydrate kinase FGGY PFAM: carbohydrate kinase FGGY~KEGG: ypm:YP_3766 putative carbohydrate kinase gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3648 YPK_3649 YPK_3649 YPK_3649 4028723 4029718 - transcriptional regulator%2C DeoR family PFAM: putative sugar-binding domain protein~KEGG: yps:YPTB0553 putative transcriptional repressor gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3649 YPK_3650 YPK_3650 YPK_3650 4030063 4031646 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_3521 autoinducer AI-2 ABC transporter%2C ATP binding protein gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3650 YPK_3651 YPK_3651 YPK_3651 4031640 4032695 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: yps:YPTB0551 ABC sugar transporter%2C permease subunit gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3651 YPK_3652 YPK_3652 YPK_3652 4032692 4033693 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: yps:YPTB0550 ABC sugar transporter%2C permease subunit gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3652 YPK_3653 YPK_3653 YPK_3653 4033752 4034771 + autoinducer AI-2 ABC transporter%2C periplasmic AI-2-binding protein KEGG: ypi:YpsIP31758_3524 autoinducer AI-2 ABC transporter%2C periplasmic AI-2-binding protein gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3653 YPK_3654 YPK_3654 YPK_3654 4034827 4035702 + deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~KEGG: ypi:YpsIP31758_3525 DeoC/FbaB aldolase family protein gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3654 YPK_3655 YPK_3655 YPK_3655 4035766 4036056 + Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: ypi:YpsIP31758_3526 antibiotic biosynthesis monooxygenase domain protein gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3655 YPK_3656 YPK_3656 YPK_3656 4036379 4036870 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3527 hypothetical protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3656 YPK_3657 YPK_3657 YPK_3657 4036932 4039526 - phosphoenolpyruvate-protein phosphotransferase TIGRFAM: PTS system%2C fructose subfamily%2C IIA subunit%3B phosphoenolpyruvate-protein phosphotransferase~PFAM: phosphocarrier HPr protein%3B PEP-utilizing protein%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2%3B PEP-utilising protein mobile region~KEGG: ypi:YpsIP31758_3528 phosphocarrier%2C HPr family gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3657 YPK_3658 YPK_3658 YPK_3658 4039891 4040973 + PTS system%2C fructose subfamily%2C IIC subunit TIGRFAM: PTS system%2C fructose subfamily%2C IIC subunit~PFAM: phosphotransferase system EIIC~KEGG: ypi:YpsIP31758_3529 PTS system%2C fructose-specific EIIC component 2 gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3658 YPK_3659 YPK_3659 YPK_3659 4041111 4041431 + PTS system%2C fructose-specific%2C IIB subunnit TIGRFAM: PTS system%2C fructose-specific%2C IIB subunnit~PFAM: phosphotransferase system PTS fructose-specific IIB subunit~KEGG: ypm:YP_3778 PTS system%2C IIB component gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3659 YPK_3660 YPK_3660 YPK_3660 4041524 4041868 + phosphotransferase system PTS fructose-specific IIB subunit PFAM: phosphotransferase system PTS fructose-specific IIB subunit~KEGG: ypi:YpsIP31758_3532 putative PTS system%2C Fru family%2C IIB component gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3660 YPK_3661 YPK_3661 YPK_3661 4041861 4042736 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: ypm:YP_3780 putative transcriptional regulator gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3661 YPK_3662 YPK_3662 YPK_3662 4042738 4043274 - conserved hypothetical protein KEGG: ypm:YP_3781 hypothetical protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3662 YPK_3663 YPK_3663 YPK_3663 4043980 4045176 + protein of unknown function DUF898 transmembrane PFAM: protein of unknown function DUF898 transmembrane~KEGG: ypi:YpsIP31758_3534 hypothetical protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3663 YPK_3664 YPK_3664 YPK_3664 4045223 4046269 + peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: ypm:YP_3783 M48 peptidase family protein gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3664 YPK_3665 YPK_3665 YPK_3665 4046612 4046914 + type I restriction-modification system%2C M subunit KEGG: ypi:YpsIP31758_3536 type I restriction-modification system%2C M subunit gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3665 YPK_3666 YPK_3666 YPK_3666 4046986 4049631 + Type I site-specific deoxyribonuclease KEGG: yps:YPTB0535 putative type I restriction enzyme%2C R subunit~PFAM: type III restriction protein res subunit~SMART: DEAD-like helicases gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3666 YPK_3667 YPK_3667 YPK_3667 4049644 4049766 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3539 hypothetical protein gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3667 YPK_3668 YPK_3668 YPK_3668 4049912 4050721 - integrase family protein PFAM: integrase family protein~KEGG: ypi:YpsIP31758_3540 site-specific recombinase%2C phage integrase family gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3668 YPK_3669 YPK_3669 YPK_3669 4050816 4050995 - hypothetical protein gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3669 YPK_3670 YPK_3670 YPK_3670 4050998 4051183 - hypothetical protein KEGG: ecs:ECs5415 hypothetical protein gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3670 YPK_3671 YPK_3671 YPK_3671 4051420 4052241 + conserved hypothetical protein KEGG: ecw:EcE24377A_3330 hypothetical protein gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3671 YPK_3672 YPK_3672 YPK_3672 4052306 4055038 + type I restriction-modification system%2C M subunit TIGRFAM: type I restriction-modification system%2C M subunit~PFAM: N-6 DNA methylase~KEGG: ypi:YpsIP31758_3536 type I restriction-modification system%2C M subunit gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3672 YPK_3673 YPK_3673 YPK_3673 4055040 4056272 + restriction modification system DNA specificity domain PFAM: restriction modification system DNA specificity domain~KEGG: spm:spyM18_1975 putative specificity determinant HsdS gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3673 YPK_3674 YPK_3674 YPK_3674 4056282 4059509 + type I site-specific deoxyribonuclease%2C HsdR family KEGG: yps:YPTB0535 putative type I restriction enzyme%2C R subunit~TIGRFAM: type I site-specific deoxyribonuclease%2C HsdR family~PFAM: type III restriction protein res subunit%3B protein of unknown function DUF450~SMART: DEAD-like helicases gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3674 YPK_3675 YPK_3675 YPK_3675 4059413 4059643 - hypothetical protein KEGG: ypi:YpsIP31758_3539 hypothetical protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3675 YPK_3676 YPK_3676 YPK_3676 4059757 4061022 - integrase family protein PFAM: integrase family protein~KEGG: ypn:YPN_0651 integrase gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3676 YPK_3677 YPK_3677 YPK_3677 4061410 4062486 - permease YjgP/YjgQ family protein PFAM: permease YjgP/YjgQ family protein~KEGG: ypi:YpsIP31758_3541 putative permease gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3677 YPK_3678 YPK_3678 YPK_3678 4062486 4063580 - permease YjgP/YjgQ family protein PFAM: permease YjgP/YjgQ family protein~KEGG: ypi:YpsIP31758_3542 putative permease gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3678 YPK_3679 YPK_3679 YPK_3679 4063860 4065371 + Leucyl aminopeptidase PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: ypi:YpsIP31758_3543 cytosol aminopeptidase gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3679 YPK_3680 YPK_3680 YPK_3680 4065522 4065971 + DNA-directed DNA polymerase PFAM: DNA polymerase III chi subunit HolC~KEGG: yen:YE0499 DNA polymerase III%2C chi subunit gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3680 YPK_3681 YPK_3681 YPK_3681 4065984 4068881 + valyl-tRNA synthetase TIGRFAM: valyl-tRNA synthetase~KEGG: ypi:YpsIP31758_3545 valyl-tRNA synthetase gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3681 YPK_3682 YPK_3682 YPK_3682 4069024 4069527 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypi:YpsIP31758_3546 acetyltransferase%2C GNAT family gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3682 YPK_3683 YPK_3683 YPK_3683 4070035 4070466 - protein of unknown function DUF1260 PFAM: protein of unknown function DUF1260~KEGG: ypi:YpsIP31758_3548 hypothetical protein gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3683 YPK_3684 YPK_3684 YPK_3684 4070677 4071684 + ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain~KEGG: yps:YPTB0526 ornithine carbamoyltransferase gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3684 YPK_3685 YPK_3685 YPK_3685 4071947 4072405 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_3550 hypothetical protein gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3685 YPK_3686 YPK_3686 YPK_3686 4073044 4074612 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ypi:YpsIP31758_3551 ABC dipeptide/oligopeptide/nickel transporter%2C periplasmic dipeptide/oligopeptide/nickel-binding protein gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3686 YPK_3687 YPK_3687 YPK_3687 4074708 4075757 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_0635 putative transporter%2C permease protein gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3687 YPK_3688 YPK_3688 YPK_3688 4075776 4076612 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_0634 putative transporter%2C permease protein gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3688 YPK_3689 YPK_3689 YPK_3689 4076605 4077483 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0633 putative ATP-binding component of dipeptide transport system gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3689 YPK_3690 YPK_3690 YPK_3690 4077470 4078186 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypk:y0734 dipeptide ABC transporter%2C ATP binding protein gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3690 YPK_3691 YPK_3691 YPK_3691 4078620 4080758 + anaerobic ribonucleoside-triphosphate reductase KEGG: ypi:YpsIP31758_3556 anaerobic ribonucleoside-triphosphate reductase~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase~PFAM: formate C-acetyltransferase glycine radical%3B ATP-cone domain protein gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3691 YPK_3692 YPK_3692 YPK_3692 4081085 4081399 + anaerobic ribonucleoside-triphosphate reductase activating protein KEGG: ypm:YP_0630 anaerobic ribonucleoside-triphosphate reductase activating protein gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3692 YPK_3693 YPK_3693 YPK_3693 4081743 4082468 + transcriptional regulator%2C GntR family TIGRFAM: phosphonates metabolism transcriptional regulator PhnF~PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain protein~KEGG: ypm:YP_0628 probable gntR-family transcriptional regulatory protein gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3693 YPK_3694 YPK_3694 YPK_3694 4082469 4082945 + phosphonate C-P lyase system protein PhnG TIGRFAM: phosphonate C-P lyase system protein PhnG~PFAM: phosphonate metabolism PhnG~KEGG: ypm:YP_0627 PhnG protein gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3694 YPK_3695 YPK_3695 YPK_3695 4082945 4083571 + phosphonate C-P lyase system protein PhnH TIGRFAM: phosphonate C-P lyase system protein PhnH~PFAM: phosphonate metabolism~KEGG: ypi:YpsIP31758_3561 phosphonate metabolism protein PhnH gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3695 YPK_3696 YPK_3696 YPK_3696 4083571 4084749 + phosphonate metabolism PFAM: phosphonate metabolism~KEGG: ypp:YPDSF_3269 PhnI protein gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3696 YPK_3697 YPK_3697 YPK_3697 4084742 4085623 + phosphonate metabolism PhnJ PFAM: phosphonate metabolism PhnJ~KEGG: ypi:YpsIP31758_3563 phosphonate metabolism protein PhnJ gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3697 YPK_3698 YPK_3698 YPK_3698 4085623 4086414 + phosphonate C-P lyase system protein PhnK KEGG: ypm:YP_0623 phosphonates transport ATP-binding protein~TIGRFAM: phosphonate C-P lyase system protein PhnK~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3698 YPK_3699 YPK_3699 YPK_3699 4086803 4087522 + phosphonate C-P lyase system protein PhnL KEGG: ypm:YP_0621 phosphonates transport ATP-binding protein~TIGRFAM: phosphonate C-P lyase system protein PhnL~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3699 YPK_3700 YPK_3700 YPK_3700 4087519 4088655 + phosphonate metabolism protein PhnM TIGRFAM: phosphonate metabolism protein PhnM~PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: ypm:YP_0620 PhnM protein gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3700 YPK_3701 YPK_3701 YPK_3701 4088655 4089236 + phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN TIGRFAM: phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN~SMART: guanylate kinase/L-type calcium channel region~KEGG: ypm:YP_0619 PhnN protein gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3701 YPK_3702 YPK_3702 YPK_3702 4089227 4089979 + phosphonate metabolism protein PhnP TIGRFAM: phosphonate metabolism protein PhnP~PFAM: beta-lactamase domain protein~KEGG: ypm:YP_0618 PhnP protein gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3702 YPK_3703 YPK_3703 YPK_3703 4090025 4090663 - conserved hypothetical protein KEGG: yps:YPTB0507 hypothetical protein gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3703 YPK_3704 YPK_3704 YPK_3704 4090815 4091258 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3570 hypothetical protein gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3704 YPK_3705 YPK_3705 YPK_3705 4091387 4092553 - conserved hypothetical protein KEGG: ypm:YP_0615 hypothetical protein gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3705 YPK_3706 YPK_3706 YPK_3706 4092568 4093662 - ABC transporter related PFAM: ABC transporter related%3B TOBE domain protein%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypk:y0715 ATP-binding component of sn-glycerol 3-phosphate transport system gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3706 YPK_3707 YPK_3707 YPK_3707 4093674 4094513 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_0613 sugar transport system%2C permease protein gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3707 YPK_3708 YPK_3708 YPK_3708 4094532 4095416 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_3574 carbohydrate uptake ABC transporter-1 (CUT1) family%2C permease protein gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3708 YPK_3709 YPK_3709 YPK_3709 4095424 4096737 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_3575 carbohydrate uptake ABC transporter-1 (CUT1) family%2C periplasmic carbohydrate-binding protein gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3709 YPK_3710 YPK_3710 YPK_3710 4097298 4098521 + conserved hypothetical protein KEGG: yps:YPTB0500 hypothetical protein gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3710 YPK_3711 YPK_3711 YPK_3711 4098545 4100563 + Heparinase II/III family protein PFAM: Heparinase II/III family protein~KEGG: ypi:YpsIP31758_3577 heparinase II/III-like family protein gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3711 YPK_3712 YPK_3712 YPK_3712 4100791 4101078 + Excinuclease ABC C subunit domain protein PFAM: Excinuclease ABC C subunit domain protein~KEGG: yps:YPTB0498 putative endonuclease gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3712 YPK_3713 YPK_3713 YPK_3713 4101253 4101756 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ypi:YpsIP31758_3579 acetyltransferase%2C GNAT family gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3713 YPK_3714 YPK_3714 YPK_3714 4101750 4102352 - Sterol-binding domain protein PFAM: Sterol-binding domain protein~KEGG: ypp:YPDSF_3287 lipid carrier protein gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3714 YPK_3715 YPK_3715 YPK_3715 4102587 4103582 + peptidase U32 PFAM: peptidase U32~KEGG: ypi:YpsIP31758_3582 peptidase%2C U32 family gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3715 YPK_3716 YPK_3716 YPK_3716 4103594 4104472 + peptidase U32 PFAM: peptidase U32~KEGG: ypi:YpsIP31758_3583 peptidase%2C U32 family gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3716 YPK_3717 YPK_3717 YPK_3717 4104613 4106019 - RND efflux system%2C outer membrane lipoprotein%2C NodT family TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein~KEGG: ypi:YpsIP31758_3584 outer membrane protein OprM gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3717 YPK_3718 YPK_3718 YPK_3718 4106021 4109146 - transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein~KEGG: ypm:YP_0601 multidrug efflux protein gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3718 YPK_3719 YPK_3719 YPK_3719 4109150 4110211 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein~KEGG: ypm:YP_0600 multidrug efflux protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3719 YPK_3720 YPK_3720 YPK_3720 4110818 4111873 + luciferase family protein PFAM: luciferase family protein~KEGG: ypi:YpsIP31758_3587 luciferase-like monooxygenase family protein gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3720 YPK_3721 YPK_3721 YPK_3721 4111838 4112128 - hypothetical protein KEGG: ypm:YP_1987 hypothetical protein gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3721 YPK_3722 YPK_3722 YPK_3722 4112128 4112439 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~KEGG: ypi:YpsIP31758_3588 DNA-binding protein gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3722 YPK_3723 YPK_3723 YPK_3723 4112463 4112831 - protein of unknown function DUF891 PFAM: protein of unknown function DUF891~KEGG: yps:YPTB0488 hypothetical protein gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3723 YPK_3724 YPK_3724 YPK_3724 4113067 4115061 - DEAD/DEAH box helicase domain protein PFAM: helicase domain protein%3B DbpA RNA-binding domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_3590 ATP-dependent RNA helicase%2C DEAD/DEAH box family gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3724 YPK_3725 YPK_3725 YPK_3725 4115248 4116132 - TPR repeat-containing protein PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: ypi:YpsIP31758_3591 lipoprotein NlpI gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3725 YPK_3726 YPK_3726 YPK_3726 4116257 4118374 - Polyribonucleotide nucleotidyltransferase KEGG: ypa:YPA_2992 polyribonucleotide nucleotidyltransferase~PFAM: 3' exoribonuclease%3B RNA binding S1 domain protein%3B KH type 1 domain protein%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%2C bacterial/organelle-type~SMART: KH domain protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3726 YPK_3727 YPK_3727 YPK_3727 4118638 4118907 - ribosomal protein S15 PFAM: ribosomal protein S15~KEGG: ypi:YpsIP31758_3593 ribosomal protein S15 gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3727 YPK_3728 YPK_3728 YPK_3728 4119029 4120003 - tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein%3B tRNA pseudouridine synthase B~KEGG: ypi:YpsIP31758_3594 tRNA pseudouridine synthase B gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3728 YPK_3729 YPK_3729 YPK_3729 4120003 4120413 - ribosome-binding factor A PFAM: ribosome-binding factor A~KEGG: ypi:YpsIP31758_3595 ribosome-binding factor A gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3729 YPK_3730 YPK_3730 YPK_3730 4120479 4123157 - translation initiation factor IF-2 TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B GTP-binding protein HSR1-related%3B elongation factor Tu domain 2 protein%3B translation initiation factor IF-2 domain protein%3B Initiation factor 2 associated domain protein %3B Miro domain protein~KEGG: ypi:YpsIP31758_3596 translation initiation factor IF-2 gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3730 YPK_3731 YPK_3731 YPK_3731 4123182 4124669 - NusA antitermination factor TIGRFAM: transcription termination factor NusA~PFAM: RNA binding S1 domain protein%3B NusA domain protein~KEGG: ypi:YpsIP31758_3597 transcription termination factor NusA gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3731 YPK_3732 YPK_3732 YPK_3732 4124691 4125143 - protein of unknown function DUF150 PFAM: protein of unknown function DUF150~KEGG: ypi:YpsIP31758_3598 hypothetical protein gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3732 YPK_3733 YPK_3733 YPK_3733 4125675 4126010 - preprotein translocase%2C SecG subunit TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~KEGG: ypi:YpsIP31758_3599 preprotein translocase%2C SecG subunit gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3733 YPK_3734 YPK_3734 YPK_3734 4126233 4127573 - phosphoglucosamine mutase TIGRFAM: phosphoglucosamine mutase~PFAM: phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III~KEGG: ypa:YPA_0050 phosphoglucomutase/phosphomannomutase gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3734 YPK_3735 YPK_3735 YPK_3735 4127583 4128416 - dihydropteroate synthase KEGG: ypi:YpsIP31758_3601 dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3735 YPK_3736 YPK_3736 YPK_3736 4128536 4130479 - ATP-dependent metalloprotease FtsH KEGG: ypm:YP_0581 cell division protein~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: peptidase M41%3B AAA ATPase central domain protein%3B peptidase M41 FtsH extracellular%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3736 YPK_3737 YPK_3737 YPK_3737 4130527 4131156 - ribosomal RNA large subunit methyltransferase J TIGRFAM: ribosomal RNA large subunit methyltransferase J~PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ~KEGG: ypa:YPA_0053 ribosomal RNA large subunit methyltransferase J gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3737 YPK_3738 YPK_3738 YPK_3738 4131303 4131596 + protein of unknown function UPF0044 PFAM: protein of unknown function UPF0044~KEGG: ypi:YpsIP31758_3604 conserved hypothetical protein TIGR00253 gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3738 YPK_3739 YPK_3739 YPK_3739 4131724 4132200 - transcription elongation factor GreA TIGRFAM: transcription elongation factor GreA~PFAM: transcription elongation factor GreA/GreB domain protein~KEGG: ypi:YpsIP31758_3605 transcription elongation factor GreA gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3739 YPK_3740 YPK_3740 YPK_3740 4132458 4133906 + D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase KEGG: ypi:YpsIP31758_3606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3740 YPK_3741 YPK_3741 YPK_3741 4133912 4134574 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypa:YPA_0057 two-component system response regulator gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3741 YPK_3742 YPK_3742 YPK_3742 4134571 4135638 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypa:YPA_0058 two-component system sensor protein gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3742 YPK_3743 YPK_3743 YPK_3743 4135711 4136883 - GTP-binding protein Obg/CgtA TIGRFAM: GTP-binding protein Obg/CgtA~PFAM: GTP-binding protein HSR1-related%3B GTP1/OBG sub domain protein~KEGG: ypi:YpsIP31758_3609 GTP-binding protein Obg/CgtA gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3743 YPK_3744 YPK_3744 YPK_3744 4137424 4137795 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0044 hypothetical protein gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3744 YPK_3745 YPK_3745 YPK_3745 4137928 4138116 - hypothetical protein gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3745 YPK_3746 YPK_3746 YPK_3746 4138569 4139171 - putative phage terminase%2C small subunit KEGG: ypi:YpsIP31758_0046 putative phage terminase%2C small subunit gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3746 YPK_3747 YPK_3747 YPK_3747 4139233 4139415 - hypothetical protein gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3747 YPK_3748 YPK_3748 YPK_3748 4139579 4140007 - conserved hypothetical protein KEGG: ecv:APECO1_3699 hypothetical protein gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3748 YPK_3749 YPK_3749 YPK_3749 4140007 4140159 - hypothetical protein gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3749 YPK_3750 YPK_3750 YPK_3750 4140246 4140656 - AntA/AntB antirepressor domain protein PFAM: AntA/AntB antirepressor domain protein~KEGG: ypi:YpsIP31758_0049 hypothetical protein gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3750 YPK_3751 YPK_3751 YPK_3751 4140653 4141663 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0050 hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3751 YPK_3752 YPK_3752 YPK_3752 4141678 4141959 - phage transcriptional regulator%2C AlpA PFAM: Prophage CP4-57 regulatory~KEGG: sdn:Sden_0315 prophage CP4-57 regulatory gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3752 YPK_3753 YPK_3753 YPK_3753 4142062 4142961 - hypothetical protein KEGG: shn:Shewana3_2954 hypothetical protein gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3753 YPK_3754 YPK_3754 YPK_3754 4143060 4144283 - integrase family protein PFAM: integrase family protein~KEGG: vco:VC0395_A2668 site-specific recombinase%2C phage integrase family gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3754 YPK_3755 YPK_3755 YPK_3755 4144446 4145432 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypi:YpsIP31758_3610 integral membrane protein gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3755 YPK_3756 YPK_3756 YPK_3756 4145520 4145777 - ribosomal protein L27 PFAM: ribosomal protein L27~KEGG: ypi:YpsIP31758_3611 ribosomal protein L27 gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3756 YPK_3757 YPK_3757 YPK_3757 4145797 4146108 - ribosomal protein L21 PFAM: ribosomal protein L21~KEGG: ypi:YpsIP31758_3612 ribosomal protein L21 gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3757 YPK_3758 YPK_3758 YPK_3758 4146368 4147339 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: ypi:YpsIP31758_3613 octaprenyl-diphosphate synthase gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3758 YPK_3759 YPK_3759 YPK_3759 4147436 4147783 - MuA-transposase/repressor protein CI DNA-binding PFAM: MuA-transposase/repressor protein CI DNA-binding~KEGG: ypa:YPA_0064 hypothetical protein gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3759 YPK_3760 YPK_3760 YPK_3760 4147967 4148242 + putative transcriptional regulator%2C Nlp KEGG: ypa:YPA_0065 putative DNA-binding protein gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3760 YPK_3761 YPK_3761 YPK_3761 4148676 4149614 - malate dehydrogenase%2C NAD-dependent TIGRFAM: malate dehydrogenase%2C NAD-dependent~PFAM: Lactate/malate dehydrogenase~KEGG: ypa:YPA_0066 malate dehydrogenase gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3761 YPK_3762 YPK_3762 YPK_3762 4150078 4150548 + arginine repressor%2C ArgR PFAM: arginine repressor~KEGG: ypi:YpsIP31758_3617 arginine repressor gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3762 YPK_3763 YPK_3763 YPK_3763 4150937 4151200 + protein of unknown function DUF1471 PFAM: protein of unknown function DUF1471~KEGG: ypi:YpsIP31758_3618 hypothetical protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3763 YPK_3764 YPK_3764 YPK_3764 4151159 4151296 - hypothetical protein gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3764 YPK_3765 YPK_3765 YPK_3765 4151496 4152881 - UDP-N-acetylmuramate TIGRFAM: UDP-N-acetylmuramate~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: yps:YPTB0457 UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopime late ligase gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3765 YPK_3766 YPK_3766 YPK_3766 4152947 4154065 + Inositol phosphatase/fructose-16-bisphosphatase PFAM: Inositol phosphatase/fructose-16-bisphosphatase~KEGG: ypm:YP_0563 fructose-bisphosphatase gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3766 YPK_3767 YPK_3767 YPK_3767 4154265 4154792 + Inorganic diphosphatase PFAM: Inorganic pyrophosphatase~KEGG: yen:YE0408 inorganic pyrophosphatase gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3767 YPK_3768 YPK_3768 YPK_3768 4154910 4155266 - AIG2 family protein PFAM: AIG2 family protein~KEGG: ypa:YPA_0072 hypothetical protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3768 YPK_3769 YPK_3769 YPK_3769 4155269 4159144 - protein of unknown function DUF490 PFAM: protein of unknown function DUF490~KEGG: ypp:YPDSF_3572 hypothetical protein gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3769 YPK_3770 YPK_3770 YPK_3770 4159141 4160877 - surface antigen (D15) PFAM: surface antigen (D15)%3B surface antigen variable number repeat protein~KEGG: ypa:YPA_0074 hypothetical protein gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3770 YPK_3771 YPK_3771 YPK_3771 4161152 4161790 + peptide methionine sulfoxide reductase TIGRFAM: peptide methionine sulfoxide reductase~PFAM: Methionine sulfoxide reductase A~KEGG: ypi:YpsIP31758_3626 methionine-S-sulfoxide reductase gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3771 YPK_3772 YPK_3772 YPK_3772 4162068 4163399 + protein of unknown function DUF21 PFAM: CBS domain containing protein%3B protein of unknown function DUF21%3B transporter-associated region~KEGG: ypa:YPA_0076 hypothetical protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3772 YPK_3773 YPK_3773 YPK_3773 4163507 4163719 - protein of unknown function DUF1107 PFAM: protein of unknown function DUF1107~KEGG: ypi:YpsIP31758_3628 hypothetical protein gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3773 YPK_3774 YPK_3774 YPK_3774 4164055 4164618 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ypi:YpsIP31758_3629 hypothetical protein gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3774 YPK_3775 YPK_3775 YPK_3775 4164621 4165361 - 3'(2')%2C5'-bisphosphate nucleotidase TIGRFAM: 3'(2')%2C5'-bisphosphate nucleotidase~PFAM: inositol monophosphatase~KEGG: ypa:YPA_0079 inositol monophosphatase family protein gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3775 YPK_3776 YPK_3776 YPK_3776 4165808 4167766 + 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase TIGRFAM: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase~PFAM: metallophosphoesterase%3B 5'-Nucleotidase domain protein~KEGG: yps:YPTB0446 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3776 YPK_3777 YPK_3777 YPK_3777 4167895 4168560 + protein of unknown function DUF542 ScdA domain protein PFAM: protein of unknown function DUF542 ScdA domain protein%3B Hemerythrin HHE cation binding domain protein~KEGG: ypi:YpsIP31758_3632 hemerythrin HHE cation binding domain protein gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3777 YPK_3778 YPK_3778 YPK_3778 4168658 4169278 - peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: ypi:YpsIP31758_3633 peptidyl-prolyl cis-trans isomerase%2C FKBP-type gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3778 YPK_3779 YPK_3779 YPK_3779 4169596 4170336 + Opacity-associated protein A PFAM: Opacity-associated protein A%3B Opacity-associated protein A domain protein~KEGG: ypa:YPA_0083 hypothetical protein gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3779 YPK_3780 YPK_3780 YPK_3780 4170476 4170931 + conserved hypothetical protein KEGG: ypa:YPA_0084 hypothetical protein gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3780 YPK_3781 YPK_3781 YPK_3781 4170997 4171449 - ribosomal protein L9 PFAM: ribosomal protein L9~KEGG: ypi:YpsIP31758_3636 ribosomal protein L9 gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3781 YPK_3782 YPK_3782 YPK_3782 4171489 4171716 - ribosomal protein S18 PFAM: ribosomal protein S18~KEGG: spe:Spro_0448 ribosomal protein S18 gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3782 YPK_3783 YPK_3783 YPK_3783 4171721 4171888 - primosomal replication protein N KEGG: ypi:YpsIP31758_3638 primosomal replication protein N gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3783 YPK_3784 YPK_3784 YPK_3784 4172047 4172439 - ribosomal protein S6 PFAM: ribosomal protein S6~KEGG: yen:YE0392 30S ribosomal protein S6 gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3784 YPK_3785 YPK_3785 YPK_3785 4172453 4172731 - conserved hypothetical protein KEGG: yps:YPTB0437 hypothetical protein gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3785 YPK_3786 YPK_3786 YPK_3786 4172807 4173556 - phospholipase/Carboxylesterase PFAM: phospholipase/Carboxylesterase~KEGG: yps:YPTB0436 hypothetical protein gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3786 YPK_3787 YPK_3787 YPK_3787 4173747 4174058 + protein of unknown function DUF1471 PFAM: protein of unknown function DUF1471~KEGG: ype:YPO0384 putative lipoprotein gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3787 YPK_3788 YPK_3788 YPK_3788 4174130 4175773 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl-CoA dehydrogenase type 2 domain~KEGG: ypi:YpsIP31758_3643 acyl-CoA dehydrogenase family protein gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3788 YPK_3789 YPK_3789 YPK_3789 4175813 4176001 - hypothetical protein gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3789 YPK_3790 YPK_3790 YPK_3790 4176181 4176921 - RNA methyltransferase%2C TrmH family%2C group 3 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: ypm:YP_0537 putative methylase gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3790 YPK_3791 YPK_3791 YPK_3791 4177040 4179574 - ribonuclease R KEGG: ypi:YpsIP31758_3646 ribonuclease R~TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease%3B ribonuclease R~PFAM: ribonuclease II%3B RNA binding S1 domain protein%3B Ribonuclease B OB region domain%3B Ribonuclease R winged-helix domain protein~SMART: Cold shock protein gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3791 YPK_3792 YPK_3792 YPK_3792 4179815 4180279 - transcriptional regulator%2C BadM/Rrf2 family TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074~KEGG: ypp:YPDSF_3595 hypothetical protein gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3792 YPK_3793 YPK_3793 YPK_3793 4180629 4181927 - Adenylosuccinate synthase PFAM: adenylosuccinate synthetase~KEGG: yps:YPTB0430 adenylosuccinate synthetase gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3793 YPK_3794 YPK_3794 YPK_3794 4182027 4182281 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3649 hypothetical protein gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3794 YPK_3795 YPK_3795 YPK_3795 4182405 4183409 - HflC protein TIGRFAM: HflC protein~PFAM: band 7 protein~KEGG: ypi:YpsIP31758_3650 HflC protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3795 YPK_3796 YPK_3796 YPK_3796 4183413 4184675 - HflK protein TIGRFAM: HflK protein~PFAM: band 7 protein~KEGG: ypi:YpsIP31758_3651 HflK protein gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3796 YPK_3797 YPK_3797 YPK_3797 4184916 4186202 - GTP-binding proten HflX TIGRFAM: GTP-binding proten HflX~PFAM: GTP-binding protein HSR1-related~KEGG: yps:YPTB0426 GTP-binding protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3797 YPK_3798 YPK_3798 YPK_3798 4186195 4186314 - hypothetical protein gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3798 YPK_3799 YPK_3799 YPK_3799 4186301 4186606 - RNA chaperone Hfq TIGRFAM: RNA chaperone Hfq~PFAM: Like-Sm ribonucleoprotein core~KEGG: ypi:YpsIP31758_3653 RNA chaperone Hfq gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3799 YPK_3800 YPK_3800 YPK_3800 4186723 4187664 - tRNA delta(2)-isopentenylpyrophosphate transferase KEGG: ypm:YP_0528 tRNA delta(2)-isopentenylpyrophosphate transferase~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3800 YPK_3801 YPK_3801 YPK_3801 4187657 4189564 - DNA mismatch repair protein MutL TIGRFAM: DNA mismatch repair protein MutL~PFAM: ATP-binding region ATPase domain protein%3B DNA mismatch repair protein domain protein%3B MutL dimerisation~KEGG: yps:YPTB0423 DNA mismatch repair protein gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3801 YPK_3802 YPK_3802 YPK_3802 4189580 4191493 - N-acetylmuramoyl-L-alanine amidase PFAM: Peptidoglycan-binding LysM%3B cell wall hydrolase/autolysin~KEGG: ypm:YP_0526 N-acetylmuramoyl-l-alanine amidase II gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3802 YPK_3803 YPK_3803 YPK_3803 4191501 4191971 - protein of unknown function UPF0079 PFAM: protein of unknown function UPF0079~KEGG: ypm:YP_0525 predicted ATPase or kinase gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3803 YPK_3804 YPK_3804 YPK_3804 4191982 4193496 - carbohydrate kinase%2C YjeF related protein TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: protein of unknown function UPF0031%3B YjeF-family domain protein~KEGG: ypm:YP_0524 predicted sugar kinase gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3804 YPK_3805 YPK_3805 YPK_3805 4193591 4194730 + iron-sulfur cluster binding protein TIGRFAM: iron-sulfur cluster binding protein~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B domain of unknown function DUF1730~KEGG: ypi:YpsIP31758_3660 iron-sulfur cluster-binding protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3805 YPK_3807 YPK_3807 YPK_3807 4195435 4195833 + hypothetical protein KEGG: ypm:YP_0522 hypothetical protein gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3807 YPK_3808 YPK_3808 YPK_3808 4195986 4196669 - Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: ypm:YP_0521 oligoribonuclease (3'->5' exoribonuclease) gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3808 YPK_3809 YPK_3809 YPK_3809 4196731 4197783 + ribosome small subunit-dependent GTPase A TIGRFAM: ribosome small subunit-dependent GTPase A~PFAM: GTPase EngC~KEGG: ypm:YP_0520 predicted GTPases gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3809 YPK_3810 YPK_3810 YPK_3810 4198231 4199112 + phosphatidylserine decarboxylase KEGG: ypi:YpsIP31758_3663 phosphatidylserine decarboxylase~TIGRFAM: phosphatidylserine decarboxylase~PFAM: phosphatidylserine decarboxylase-related gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3810 YPK_3811 YPK_3811 YPK_3811 4199154 4202495 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ypi:YpsIP31758_3664 mechanosensitive ion channel domain protein gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3811 YPK_3812 YPK_3812 YPK_3812 4202740 4203717 - lysyl-tRNA synthetase-related protein GenX TIGRFAM: lysyl-tRNA synthetase-related protein GenX~PFAM: tRNA synthetase class II (G H P and S)%3B tRNA synthetase class II (D K and N)~KEGG: ypm:YP_0517 putative lysyl-tRNA synthetase gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3812 YPK_3813 YPK_3813 YPK_3813 4204175 4205998 + fumarate reductase%2C flavoprotein subunit KEGG: ypm:YP_0515 fumarate reductase flavoprotein subunit~TIGRFAM: fumarate reductase%2C flavoprotein subunit%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3813 YPK_3814 YPK_3814 YPK_3814 4205991 4206725 + succinate dehydrogenase and fumarate reductase iron-sulfur protein KEGG: ypi:YpsIP31758_3668 fumarate reductase%2C iron-sulfur protein~TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~PFAM: ferredoxin%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3814 YPK_3815 YPK_3815 YPK_3815 4206742 4207134 + fumarate reductase subunit C PFAM: fumarate reductase subunit C~KEGG: ypm:YP_0513 fumarate reductase hydrophobic protein gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3815 YPK_3816 YPK_3816 YPK_3816 4207151 4207507 + fumarate reductase D subunit PFAM: fumarate reductase D subunit~KEGG: ypi:YpsIP31758_3670 fumarate reductase%2C D subunit gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3816 YPK_3817 YPK_3817 YPK_3817 4207672 4208133 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: ypm:YP_0511 suppresses groEL%2C may be chaperone gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3817 YPK_3818 YPK_3818 YPK_3818 4208233 4208799 - translation elongation factor P TIGRFAM: translation elongation factor P~PFAM: Elongation factor P/YeiP protein%3B Elongation factor KOW domain protein%3B Elongation factor P~KEGG: ypi:YpsIP31758_3672 translation elongation factor P gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3818 YPK_3819 YPK_3819 YPK_3819 4208859 4209863 + lysine 2%2C3-aminomutase YodO family protein KEGG: ypi:YpsIP31758_3673 iron-sulfur cluster-binding protein%2C KamA family~TIGRFAM: lysine 2%2C3-aminomutase YodO family protein~PFAM: Radical SAM domain protein gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3819 YPK_3820 YPK_3820 YPK_3820 4210182 4210295 + hypothetical protein gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3820 YPK_3821 YPK_3821 YPK_3821 4210335 4210733 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3674 hypothetical protein gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3821 YPK_3822 YPK_3822 YPK_3822 4211358 4213004 - chaperonin GroEL TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~KEGG: ypi:YpsIP31758_3675 chaperonin GroL gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3822 YPK_3823 YPK_3823 YPK_3823 4213051 4213344 - chaperonin Cpn10 PFAM: chaperonin Cpn10~KEGG: ypi:YpsIP31758_3676 chaperonin GroS gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3823 YPK_3824 YPK_3824 YPK_3824 4213599 4214186 - FxsA cytoplasmic membrane protein PFAM: FxsA cytoplasmic membrane protein~KEGG: ypi:YpsIP31758_3677 protein FxsA gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3824 YPK_3825 YPK_3825 YPK_3825 4214610 4216046 + aspartate ammonia-lyase TIGRFAM: aspartate ammonia-lyase~PFAM: fumarate lyase~KEGG: ypm:YP_0502 aspartate ammonia-lyase gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3825 YPK_3826 YPK_3826 YPK_3826 4216166 4217467 + anaerobic c4-dicarboxylate antiporter%2C Dcu family TIGRFAM: anaerobic c4-dicarboxylate antiporter%2C Dcu family~PFAM: anaerobic c4-dicarboxylate membrane transporter~KEGG: ypi:YpsIP31758_3679 anaerobic C4-dicarboxylate transporter DcuA gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3826 YPK_3827 YPK_3827 YPK_3827 4217652 4218011 + CutA1 divalent ion tolerance protein PFAM: CutA1 divalent ion tolerance protein~KEGG: ypi:YpsIP31758_3680 divalent-cation tolerance protein CutA gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3827 YPK_3828 YPK_3828 YPK_3828 4217987 4219774 + Protein-disulfide reductase PFAM: cytochrome c biogenesis protein transmembrane region%3B Thioredoxin domain~KEGG: ypi:YpsIP31758_3681 thiol:disulfide interchange protein DsbD gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3828 YPK_3829 YPK_3829 YPK_3829 4219836 4221983 - formate dehydrogenase%2C alpha subunit TIGRFAM: formate dehydrogenase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: yps:YPTB0398 formate dehydrogenase H gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3829 YPK_3830 YPK_3830 YPK_3830 4222006 4222563 - 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ypi:YpsIP31758_3683 iron-sulfur cluster-binding protein gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3830 YPK_3831 YPK_3831 YPK_3831 4222586 4224601 - glutamate synthase%2C small subunit TIGRFAM: glutamate synthase%2C small subunit~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: yps:YPTB0396 putative oxidoreductase gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3831 YPK_3832 YPK_3832 YPK_3832 4225021 4225596 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypk:y0598 hypothetical protein gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3832 YPK_3834 YPK_3834 YPK_3834 4226250 4228805 - peptidase M60 viral enhancin protein PFAM: peptidase M60 viral enhancin protein~KEGG: ypi:YpsIP31758_3749 viral enhancin protein gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3834 YPK_3835 YPK_3835 YPK_3835 4228835 4229002 - conserved hypothetical protein KEGG: ypp:YPDSF_3634 hypothetical protein gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3835 YPK_3836 YPK_3836 YPK_3836 4229061 4229180 + hypothetical protein gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3836 YPK_3837 YPK_3837 YPK_3837 4229232 4229657 + conserved hypothetical protein KEGG: ypm:YP_0491 hypothetical protein gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3837 YPK_3838 YPK_3838 YPK_3838 4229720 4229995 - IS1 transposase PFAM: IS1 transposase~KEGG: ypp:YPDSF_3635 transposase gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3838 YPK_3839 YPK_3839 YPK_3839 4230093 4230359 - conserved hypothetical protein KEGG: ypm:YP_0490 hypothetical protein gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3839 YPK_3840 YPK_3840 YPK_3840 4230513 4231547 + L-rhamnose-proton symporter%2C RhaT family%2C DMT superfamily TIGRFAM: L-rhamnose-proton symporter%2C RhaT family%2C DMT superfamily~PFAM: RhaT l-rhamnose-proton symport 2~KEGG: ypm:YP_0489 L-rhamnose-proton symport protein gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3840 YPK_3841 YPK_3841 YPK_3841 4231696 4232568 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B AraC protein arabinose-binding/dimerisation~KEGG: ypp:YPDSF_3639 L-rhamnose operon transcriptional activator gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3841 YPK_3842 YPK_3842 YPK_3842 4232701 4233522 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type%3B AraC protein arabinose-binding/dimerisation%3B Cupin 2 conserved barrel domain protein~KEGG: ypi:YpsIP31758_3754 transcriptional activator RhaS gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3842 YPK_3843 YPK_3843 YPK_3843 4233604 4233747 - hypothetical protein gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3843 YPK_3844 YPK_3844 YPK_3844 4233744 4233920 - phosphoribosylaminoimidazol (AIR) synthetase KEGG: ypm:YP_0486 phosphoribosylaminoimidazol (AIR) synthetase gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3844 YPK_3845 YPK_3845 YPK_3845 4233958 4235376 + rhamnulokinase TIGRFAM: rhamnulokinase~PFAM: carbohydrate kinase FGGY~KEGG: ypi:YpsIP31758_3755 rhamnulokinase gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3845 YPK_3846 YPK_3846 YPK_3846 4235373 4236629 + L-rhamnose isomerase PFAM: L-rhamnose isomerase~KEGG: ypp:YPDSF_3643 L-rhamnose isomerase gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3846 YPK_3847 YPK_3847 YPK_3847 4236642 4237466 + rhamnulose-1-phosphate aldolase KEGG: ypm:YP_0483 rhamnulose-1-phosphate aldolase~TIGRFAM: rhamnulose-1-phosphate aldolase~PFAM: class II aldolase/adducin family protein gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3847 YPK_3848 YPK_3848 YPK_3848 4237533 4238681 + lactaldehyde reductase TIGRFAM: lactaldehyde reductase~PFAM: iron-containing alcohol dehydrogenase~KEGG: ypi:YpsIP31758_3758 lactaldehyde reductase gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3848 YPK_3849 YPK_3849 YPK_3849 4238695 4239009 + L-rhamnose 1-epimerase TIGRFAM: L-rhamnose 1-epimerase~PFAM: protein of unknown function DUF718~KEGG: ypi:YpsIP31758_3759 L-rhamnose 1-epimerase gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3849 YPK_3850 YPK_3850 YPK_3850 4239275 4239823 - single-strand binding protein TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: ypi:YpsIP31758_3760 single-strand binding protein gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3850 YPK_3851 YPK_3851 YPK_3851 4240281 4243124 + excinuclease ABC%2C A subunit TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~KEGG: yps:YPTB0379 excinuclease ABC subunit A gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3851 YPK_3852 YPK_3852 YPK_3852 4243217 4243576 - protein of unknown function DUF419 PFAM: protein of unknown function DUF419~KEGG: ypi:YpsIP31758_3762 hypothetical protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3852 YPK_3853 YPK_3853 YPK_3853 4244103 4245296 - Aromatic-amino-acid transaminase PFAM: aminotransferase class I and II~KEGG: yps:YPTB0377 aspartate aminotransferase gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3853 YPK_3854 YPK_3854 YPK_3854 4245482 4246561 - alanine racemase KEGG: ypm:YP_0476 alanine racemase (biosynthetic)~TIGRFAM: alanine racemase~PFAM: alanine racemase domain protein gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3854 YPK_3855 YPK_3855 YPK_3855 4246658 4248013 - replicative DNA helicase KEGG: ypi:YpsIP31758_3765 replicative DNA helicase~TIGRFAM: replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~SMART: AAA ATPase gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3855 YPK_3856 YPK_3856 YPK_3856 4248397 4249380 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: yps:YPTB0374 quinone oxidoreductase gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3856 YPK_3857 YPK_3857 YPK_3857 4249725 4249943 - phage shock protein G TIGRFAM: phage shock protein G~PFAM: shock protein G~KEGG: ypm:YP_0473 phage shock protein G gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3857 YPK_3858 YPK_3858 YPK_3858 4250459 4251496 - TIM-barrel protein%2C yjbN family TIGRFAM: TIM-barrel protein%2C yjbN family~PFAM: dihydrouridine synthase DuS~KEGG: yps:YPTB0372 tRNA-dihydrouridine synthase A gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3858 YPK_3859 YPK_3859 YPK_3859 4251748 4252260 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: ypi:YpsIP31758_3769 zinc uptake regulation protein gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3859 YPK_3860 YPK_3860 YPK_3860 4252441 4253049 - transcriptional repressor%2C LexA family KEGG: ypm:YP_0470 LexA repressor~TIGRFAM: LexA repressor~PFAM: LexA DNA-binding domain protein%3B peptidase S24 and S26 domain protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3860 YPK_3861 YPK_3861 YPK_3861 4253174 4253545 - diacylglycerol kinase PFAM: diacylglycerol kinase~KEGG: ypm:YP_0469 diacylglycerol kinase gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3861 YPK_3862 YPK_3862 YPK_3862 4253673 4256159 + Glycerol-3-phosphate O-acyltransferase PFAM: phospholipid/glycerol acyltransferase~KEGG: yps:YPTB0368 glycerol-3-phosphate acyltransferase gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3862 YPK_3863 YPK_3863 YPK_3863 4256340 4257206 - 4-hydroxybenzoate polyprenyl transferase TIGRFAM: 4-hydroxybenzoate polyprenyl transferase~PFAM: UbiA prenyltransferase~KEGG: yps:YPTB0367 4-hydroxybenzoate octaprenyltransferase gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3863 YPK_3864 YPK_3864 YPK_3864 4257388 4257912 - Chorismate lyase PFAM: Chorismate lyase~KEGG: ypm:YP_0466 putative chorismate--pyruvate lyase gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3864 YPK_3865 YPK_3865 YPK_3865 4258744 4262553 + outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein~PFAM: Autotransporter beta- domain protein~KEGG: ypn:YPN_3360 hypothetical protein gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3865 YPK_3866 YPK_3866 YPK_3866 4262897 4264954 - Berberine/berberine domain protein PFAM: Carbohydrate-binding family V/XII%3B Fibronectin type III domain protein%3B FAD linked oxidase domain protein%3B Berberine/berberine domain protein~KEGG: ypi:YpsIP31758_3776 putative oxidoreductase%2C FAD-binding gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3866 YPK_3867 YPK_3867 YPK_3867 4265963 4267282 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3779 hypothetical protein gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3867 YPK_3868 YPK_3868 YPK_3868 4268544 4268726 - hypothetical protein KEGG: ypm:YP_0461 hypothetical protein gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3868 YPK_3869 YPK_3869 YPK_3869 4268737 4269480 - putative fimbrial chaperone KEGG: yps:YPTB0360 putative fimbrial chaperone gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3869 YPK_3870 YPK_3870 YPK_3870 4269552 4271930 - fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: ypi:YpsIP31758_3782 fimbrial usher protein gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3870 YPK_3871 YPK_3871 YPK_3871 4272181 4272819 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3783 hypothetical protein gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3871 YPK_3872 YPK_3872 YPK_3872 4273532 4274107 - stress protein PFAM: stress protein~KEGG: yps:YPTB0357 tellurium resistance protein gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3872 YPK_3873 YPK_3873 YPK_3873 4274291 4274869 - stress protein PFAM: stress protein~KEGG: ypi:YpsIP31758_3785 tellurium resistance protein gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3873 YPK_3874 YPK_3874 YPK_3874 4274933 4275970 - Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: yps:YPTB0355 tellurite resistance protein gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3874 YPK_3875 YPK_3875 YPK_3875 4275992 4276447 - Tellurite resistance TerB PFAM: Tellurite resistance TerB~KEGG: ypi:YpsIP31758_3787 tellurite resistance protein gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3875 YPK_3876 YPK_3876 YPK_3876 4276480 4277664 - stress protein PFAM: stress protein~KEGG: ypi:YpsIP31758_3788 tellurite resistance protein gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3876 YPK_3877 YPK_3877 YPK_3877 4277664 4278257 - stress protein PFAM: stress protein~KEGG: ypi:YpsIP31758_3789 tellurium resistance protein gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3877 YPK_3878 YPK_3878 YPK_3878 4278533 4279594 + conserved hypothetical protein KEGG: yps:YPTB0351 hypothetical protein gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3878 YPK_3879 YPK_3879 YPK_3879 4279606 4280742 + conserved hypothetical protein KEGG: ypm:YP_0450 hypothetical protein gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3879 YPK_3880 YPK_3880 YPK_3880 4280735 4281547 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3792 hypothetical protein gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3880 YPK_3881 YPK_3881 YPK_3881 4281540 4282619 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3793 hypothetical protein gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3881 YPK_3882 YPK_3882 YPK_3882 4282619 4283578 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3794 hypothetical protein gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3882 YPK_3883 YPK_3883 YPK_3883 4283975 4284463 + conserved hypothetical protein KEGG: ypi:YpsIP31758_3795 hypothetical protein gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3883 YPK_3884 YPK_3884 YPK_3884 4284778 4285578 + methylenetetrahydrofolate reductase PFAM: methylenetetrahydrofolate reductase~KEGG: ypi:YpsIP31758_3796 methylenetetrahydrofolate reductase gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3884 YPK_3885 YPK_3885 YPK_3885 4285919 4287232 + Coproporphyrinogen dehydrogenase KEGG: yps:YPTB0344 putative coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3885 YPK_3886 YPK_3886 YPK_3886 4287229 4287792 + protein of unknown function DUF1008 PFAM: protein of unknown function DUF1008~KEGG: yps:YPTB0343 hypothetical protein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3886 YPK_3887 YPK_3887 YPK_3887 4287826 4288476 + NmrA family protein PFAM: NmrA family protein~KEGG: ypm:YP_0440 predicted nucleoside-diphosphate-sugar epimerase gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3887 YPK_3888 YPK_3888 YPK_3888 4288562 4288753 + hemin uptake protein KEGG: ypi:YpsIP31758_3800 hemin uptake protein gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3888 YPK_3889 YPK_3889 YPK_3889 4288884 4290914 + TonB-dependent heme/hemoglobin receptor family protein TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor%3B TonB-dependent heme/hemoglobin receptor family protein~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypi:YpsIP31758_3801 TonB-dependent hemin receptor HmuR gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3889 YPK_3890 YPK_3890 YPK_3890 4291033 4292070 + Haemin-degrading family protein PFAM: Haemin-degrading family protein~KEGG: yps:YPTB0339 possible hemin degradation/transport protein HmuS gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3890 YPK_3891 YPK_3891 YPK_3891 4292067 4292906 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ypm:YP_0436 hemin-binding periplasmic protein gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3891 YPK_3892 YPK_3892 YPK_3892 4292903 4293907 + transport system permease protein PFAM: transport system permease protein~KEGG: ypm:YP_0435 hemin transport system permease protein HmuU gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3892 YPK_3893 YPK_3893 YPK_3893 4293900 4294700 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypm:YP_0434 hemin transport system ATP-binding protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3893 YPK_3894 YPK_3894 YPK_3894 4294841 4296022 - cystathionine beta-lyase TIGRFAM: cystathionine beta-lyase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: ypm:YP_0433 cystathionine beta-lyase gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3894 YPK_3895 YPK_3895 YPK_3895 4296068 4297354 - putative transmembrane transport protein KEGG: ypm:YP_0432 putative transmembrane transport protein gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3895 YPK_3896 YPK_3896 YPK_3896 4297524 4298507 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_3808 substrate-binding transcriptional regulator%2C LysR family gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3896 YPK_3897 YPK_3897 YPK_3897 4298585 4298854 - SirA family protein PFAM: SirA family protein~KEGG: ypi:YpsIP31758_3809 hypothetical protein gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3897 YPK_3898 YPK_3898 YPK_3898 4298851 4300065 - protein of unknown function DUF395 YeeE/YedE PFAM: protein of unknown function DUF395 YeeE/YedE~KEGG: ypm:YP_0429 putative integral membrane protein gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3898 YPK_3899 YPK_3899 YPK_3899 4300448 4301515 - type III secretion protein%2C YscU/HrpY family TIGRFAM: type III secretion protein%2C YscU/HrpY family~PFAM: type III secretion exporter~KEGG: yps:YPTB0330 putative type III secretion apparatus protein EscU/SsaU/YscU gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3899 YPK_3900 YPK_3900 YPK_3900 4301505 4302299 - type III secretion protein SpaR/YscT/HrcT TIGRFAM: type III secretion protein SpaR/YscT/HrcT~PFAM: type III secretion system inner membrane R protein~KEGG: ypm:YP_0427 putative type III secretion apparatus protein gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3900 YPK_3901 YPK_3901 YPK_3901 4302301 4302594 - type III secretion protein%2C HrpO family TIGRFAM: type III secretion protein%2C HrpO family~PFAM: export protein FliQ family 3~KEGG: yps:YPTB0328 putative type III secretion apparatus protein EscS/SsaS/YscS gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3901 YPK_3902 YPK_3902 YPK_3902 4302591 4303301 - Yop virulence translocation R TIGRFAM: Yop virulence translocation R~PFAM: type III secretion system inner membrane P protein~KEGG: ypp:YPDSF_3700 type III secretion apparatus protein gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3902 YPK_3903 YPK_3903 YPK_3903 4303368 4304330 - type III secretion system apparatus protein YscQ/HrcQ TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ~PFAM: surface presentation of antigens (SPOA) protein~KEGG: ypi:YpsIP31758_3815 type III secretion apparatus protein%2C YscQ/HrcQ family gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3903 YPK_3904 YPK_3904 YPK_3904 4304308 4304706 - conserved hypothetical protein KEGG: ypi:YpsIP31758_3816 hypothetical protein gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3904 YPK_3905 YPK_3905 YPK_3905 4304687 4305088 - type III secretion system apparatus protein KEGG: yps:YPTB0324 type III secretion system apparatus protein gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3905 YPK_3906 YPK_3906 YPK_3906 4305085 4306422 - ATPase%2C FliI/YscN family KEGG: ypi:YpsIP31758_3818 type III secretion apparatus H+-transporting two-sector ATPase~TIGRFAM: ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3906 YPK_3907 YPK_3907 YPK_3907 4306409 4308457 - type III secretion protein%2C HrcV family TIGRFAM: type III secretion protein%2C HrcV family~PFAM: type III secretion FHIPEP protein~KEGG: ypi:YpsIP31758_3819 type III secretion protein%2C HrcV family gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3907 YPK_3908 YPK_3908 YPK_3908 4308450 4309097 - type III secretion apparatus protein%2C HrpE/YscL family TIGRFAM: type III secretion apparatus protein%2C HrpE/YscL family~KEGG: ypi:YpsIP31758_3820 type III secretion apparatus protein%2C HrpE/YscL family gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3908 YPK_3909 YPK_3909 YPK_3909 4309094 4309687 - conserved hypothetical protein KEGG: ypm:YP_0418 hypothetical protein gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3909 YPK_3910 YPK_3910 YPK_3910 4309882 4310613 - type III secretion apparatus lipoprotein%2C YscJ/HrcJ family TIGRFAM: type III secretion apparatus lipoprotein%2C YscJ/HrcJ family~PFAM: secretory protein YscJ/FliF family protein~KEGG: ypi:YpsIP31758_3822 type III secretion apparatus lipoprotein%2C YscJ/HrcJ family gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3910 YPK_3911 YPK_3911 YPK_3911 4310610 4310861 - type III secretion apparatus protein%2C YscI/HrpB family TIGRFAM: type III secretion apparatus protein%2C YscI/HrpB family~PFAM: type III secretion system YscI/HrpB domain protein~KEGG: ypm:YP_0416 putative type III secretion apparatus gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3911 YPK_3912 YPK_3912 YPK_3912 4310959 4311207 - type III secretion system protein%2C SsaH family TIGRFAM: type III secretion system protein%2C SsaH family~KEGG: ypm:YP_0415 putative type III secretion apparatus gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3912 YPK_3913 YPK_3913 YPK_3913 4311204 4311419 - type III secretion system needle protein TIGRFAM: type III secretion system needle protein~KEGG: ypm:YP_0414 putative type III secretion apparatus gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3913 YPK_3914 YPK_3914 YPK_3914 4311429 4312136 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~KEGG: ypi:YpsIP31758_3827 transcriptional regulator%2C AraC family gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3914 YPK_3915 YPK_3915 YPK_3915 4312243 4312464 - type III secretion system protein%2C YseE family TIGRFAM: type III secretion system protein%2C YseE family~KEGG: ypp:YPDSF_3712 type III secretion apparatus gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3915 YPK_3916 YPK_3916 YPK_3916 4312483 4313697 - type III secretion apparatus protein%2C YscD/HrpQ family TIGRFAM: type III secretion apparatus protein%2C YscD/HrpQ family~KEGG: ypi:YpsIP31758_3829 type III secretion apparatus protein%2C YscD/HrpQ family gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3916 YPK_3917 YPK_3917 YPK_3917 4313699 4315216 - type III secretion outer membrane pore%2C YscC/HrcC family TIGRFAM: type III secretion outer membrane pore%2C YscC/HrcC family~PFAM: type II and III secretion system protein%3B NolW domain protein~KEGG: ypi:YpsIP31758_3830 type III secretion outer membrane pore%2C YscC/HrcC family gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3917 YPK_3918 YPK_3918 YPK_3918 4315443 4318262 + multi-sensor hybrid histidine kinase PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B Hpt domain protein~KEGG: yps:YPTB0311 two-component sensor/regulator gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3918 YPK_3919 YPK_3919 YPK_3919 4318275 4318907 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~KEGG: ypi:YpsIP31758_3833 putative DNA-binding response regulator EsrB gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3919 YPK_3920 YPK_3920 YPK_3920 4319085 4320401 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: ypi:YpsIP31758_3834 glutamate/aspartate symport protein gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3920 YPK_3921 YPK_3921 YPK_3921 4321256 4323214 + acetate--CoA ligase TIGRFAM: acetate--CoA ligase~PFAM: AMP-dependent synthetase and ligase~KEGG: ypi:YpsIP31758_3835 acetate--CoA ligase gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3921 YPK_3922 YPK_3922 YPK_3922 4323271 4323582 + protein of unknown function DUF485 PFAM: protein of unknown function DUF485~KEGG: ypm:YP_0405 hypothetical protein gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3922 YPK_3923 YPK_3923 YPK_3923 4323579 4325234 + cation/acetate symporter ActP TIGRFAM: SSS sodium solute transporter superfamily%3B cation/acetate symporter ActP~PFAM: Na+/solute symporter~KEGG: yps:YPTB0306 putative sodium:phenylacetate symporter%2C SSS family protein PhaJ gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3923 YPK_3924 YPK_3924 YPK_3924 4325308 4326465 - conserved hypothetical protein KEGG: yps:YPTB0305 hypothetical protein gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3924 YPK_3925 YPK_3925 YPK_3925 4326860 4327615 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: yps:pYV0019 putative transposase gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3925 YPK_3926 YPK_3926 YPK_3926 4327693 4327959 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: yps:pYV0018 putative transposase gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3926 YPK_3929 YPK_3929 YPK_3929 4334105 4334638 - Protoporphyrinogen oxidase KEGG: ypi:YpsIP31758_0287 protoporphyrinogen oxidase gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3929 YPK_3930 YPK_3930 YPK_3930 4334660 4336111 - potassium uptake protein%2C TrkH family TIGRFAM: potassium uptake protein%2C TrkH family~PFAM: cation transporter~KEGG: ypm:YP_3285 Trk system potassium uptake protein TrkH gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3930 YPK_3931 YPK_3931 YPK_3931 4336151 4336762 - protein of unknown function UPF0029 PFAM: protein of unknown function UPF0029%3B Domain of unknown function DUF1949~KEGG: ypi:YpsIP31758_0285 hypothetical protein gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3931 YPK_3932 YPK_3932 YPK_3932 4336762 4338093 - peptidase M24 PFAM: peptidase M24~KEGG: ypi:YpsIP31758_0284 Xaa-Pro dipeptidase gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3932 YPK_3933 YPK_3933 YPK_3933 4338420 4340609 + fatty oxidation complex%2C alpha subunit FadB TIGRFAM: fatty oxidation complex%2C alpha subunit FadB~PFAM: Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein%3B 3-hydroxyacyl-CoA dehydrogenase NAD-binding~KEGG: ypp:YPDSF_3386 fatty acid oxidation complex alpha subunit gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3933 YPK_3934 YPK_3934 YPK_3934 4340621 4341784 + acetyl-CoA C-acyltransferase FadA KEGG: ypi:YpsIP31758_0282 acetyl-CoA C-acyltransferase FadA~TIGRFAM: acetyl-CoA acetyltransferase%3B acetyl-CoA C-acyltransferase FadA~PFAM: Thiolase gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3934 YPK_3935 YPK_3935 YPK_3935 4341944 4342645 - oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypi:YpsIP31758_0281 NAD(P)H-flavin reductase gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3935 YPK_3936 YPK_3936 YPK_3936 4342700 4344220 - UbiD family decarboxylase TIGRFAM: UbiD family decarboxylase~PFAM: Carboxylyase-related protein~KEGG: ypn:YPN_0195 hypothetical protein gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3936 YPK_3937 YPK_3937 YPK_3937 4344444 4344929 + transcriptional acivator RfaH KEGG: ypi:YpsIP31758_0279 transcriptional activator RfaH~TIGRFAM: transcriptional activator RfaH~PFAM: NGN domain protein~SMART: KOW domain protein gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3937 YPK_3938 YPK_3938 YPK_3938 4345042 4346064 - Porphobilinogen synthase PFAM: delta-aminolevulinic acid dehydratase~KEGG: ypi:YpsIP31758_0278 delta-aminolevulinic acid dehydratase gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3938 YPK_3939 YPK_3939 YPK_3939 4346079 4346861 - TatD-related deoxyribonuclease PFAM: TatD-related deoxyribonuclease~KEGG: ypp:YPDSF_3392 hypothetical protein gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3939 YPK_3940 YPK_3940 YPK_3940 4346917 4347693 - Sec-independent protein translocase%2C TatC subunit TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~KEGG: ypi:YpsIP31758_0276 twin arginine-targeting protein translocase TatC gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3940 YPK_3941 YPK_3941 YPK_3941 4347696 4348358 - twin-arginine translocation protein%2C TatB subunit TIGRFAM: twin-arginine translocation protein%2C TatB subunit~KEGG: ypi:YpsIP31758_0275 twin arginine-targeting protein translocase TatB gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3941 YPK_3942 YPK_3942 YPK_3942 4348362 4348628 - twin-arginine translocation protein%2C TatA/E family subunit TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106~KEGG: ypi:YpsIP31758_0274 twin arginine-targeting protein translocase TatA gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3942 YPK_3943 YPK_3943 YPK_3943 4348808 4350439 - 2-polyprenylphenol 6-hydroxylase TIGRFAM: 2-polyprenylphenol 6-hydroxylase~PFAM: ABC-1 domain protein~KEGG: ypi:YpsIP31758_0273 2-polyprenylphenol 6-hydroxylase gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3943 YPK_3944 YPK_3944 YPK_3944 4350439 4351089 - Sterol-binding domain protein PFAM: Sterol-binding domain protein~KEGG: ypa:YPA_0244 hypothetical protein gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3944 YPK_3945 YPK_3945 YPK_3945 4351103 4351858 - ubiquinone/menaquinone biosynthesis methyltransferase TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: UbiE/COQ5 methyltransferase%3B Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ypi:YpsIP31758_0271 ubiquinone/menaquinone biosynthesis methyltransferase UbiE gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3945 YPK_3946 YPK_3946 YPK_3946 4351950 4353455 - protein of unknown function DUF195 PFAM: protein of unknown function DUF195~KEGG: yps:YPTB0254 putative DNA recombination protein gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3946 YPK_3947 YPK_3947 YPK_3947 4353663 4354193 - conserved hypothetical protein KEGG: ypm:YP_3266 hypothetical protein gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3947 YPK_3948 YPK_3948 YPK_3948 4354465 4356276 - carbon starvation protein CstA PFAM: carbon starvation protein CstA~KEGG: yps:YPTB0252 putative carbon starvation protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3948 YPK_3949 YPK_3949 YPK_3949 4356640 4357485 - protein tyrosine/serine phosphatase KEGG: yps:YPTB0251 hypothetical protein gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3949 YPK_3950 YPK_3950 YPK_3950 4357606 4358367 - uridine phosphorylase TIGRFAM: uridine phosphorylase~PFAM: purine or other phosphorylase family 1~KEGG: ypa:YPA_0238 uridine phosphorylase gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3950 YPK_3951 YPK_3951 YPK_3951 4358794 4359666 + Carboxymethylenebutenolidase PFAM: dienelactone hydrolase%3B BAAT/Acyl-CoA thioester hydrolase~KEGG: ypi:YpsIP31758_0265 dienelactone hydrolase family protein gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3951 YPK_3952 YPK_3952 YPK_3952 4359721 4362012 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase KEGG: ypk:y0442 tetrahydropteroyltriglutamate methyltransferase~TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~PFAM: Methionine synthase vitamin-B12 independent%3B Cobalamin-independent synthase MetE domain protein gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3952 YPK_3953 YPK_3953 YPK_3953 4362103 4363056 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0262 transcriptional regulator MetR gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3953 YPK_3954 YPK_3954 YPK_3954 4362944 4363843 - carboxylate/amino acid/amine transporter TIGRFAM: carboxylate/amino acid/amine transporter~PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypa:YPA_0234 hypothetical protein gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3954 YPK_3955 YPK_3955 YPK_3955 4364050 4365252 - protein of unknown function DUF955 PFAM: helix-turn-helix domain protein%3B protein of unknown function DUF955~KEGG: yps:YPTB0245 hypothetical protein gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3955 YPK_3956 YPK_3956 YPK_3956 4365265 4365933 - conserved hypothetical protein KEGG: yps:YPTB0244 hypothetical protein gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3956 YPK_3957 YPK_3957 YPK_3957 4366070 4367026 - Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: ypm:YP_3258 putative inner membrane permease gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3957 YPK_3958 YPK_3958 YPK_3958 4367127 4367876 - Glycerophosphodiester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: ypi:YpsIP31758_0260 glycerophosphoryl diester phosphodiesterase gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3958 YPK_3959 YPK_3959 YPK_3959 4367873 4368946 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0259 glycerol-3-phosphate ABC transporter%2C ATP-binding protein gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3959 YPK_3960 YPK_3960 YPK_3960 4368953 4369798 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypa:YPA_0230 sn-glycerol-3-phosphate transport system%2C permease protein gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3960 YPK_3961 YPK_3961 YPK_3961 4369795 4370682 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypi:YpsIP31758_0257 glycerol-3-phosphate ABC transporter%2C permease protein gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3961 YPK_3962 YPK_3962 YPK_3962 4370998 4372317 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_0256 glycerol-3-phosphate ABC transporter%2C periplasmic glycerol-3-phosphate binding protein gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3962 YPK_3963 YPK_3963 YPK_3963 4372875 4373363 + conserved hypothetical protein KEGG: yps:YPTB0237 hypothetical protein gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3963 YPK_3964 YPK_3964 YPK_3964 4373630 4375945 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0254 hypothetical protein gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3964 YPK_3965 YPK_3965 YPK_3965 4375963 4376649 + conserved hypothetical protein KEGG: ypp:YPDSF_3416 hypothetical protein gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3965 YPK_3966 YPK_3966 YPK_3966 4376621 4377268 + conserved hypothetical protein KEGG: ypm:YP_3249 hypothetical protein gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3966 YPK_3967 YPK_3967 YPK_3967 4377330 4377848 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0251 hypothetical protein gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3967 YPK_3968 YPK_3968 YPK_3968 4377954 4379060 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0250 hypothetical protein gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3968 YPK_3969 YPK_3969 YPK_3969 4379175 4379636 - conserved hypothetical protein KEGG: ypp:YPDSF_3420 hypothetical protein gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3969 YPK_3970 YPK_3970 YPK_3970 4379864 4380565 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0220 high-affinity branched-chain amino acid transport%2C ATP-binding protein gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3970 YPK_3971 YPK_3971 YPK_3971 4380610 4381377 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0219 high-affinity branched-chain amino acid transport%2C ATP-binding protein gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3971 YPK_3972 YPK_3972 YPK_3972 4381374 4382660 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: yps:YPTB0228 ABC type branched-chain aa transport system%2C permease gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3972 YPK_3973 YPK_3973 YPK_3973 4382657 4383583 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: ypa:YPA_0217 high-affinity branched-chain amino acid transport system%2C permease protein gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3973 YPK_3974 YPK_3974 YPK_3974 4383764 4384879 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: ypa:YPA_0214 branched-chain amino acid-binding protein gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3974 YPK_3975 YPK_3975 YPK_3975 4385301 4385693 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: yps:YPTB0225 putative acetyltransferase gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3975 YPK_3976 YPK_3976 YPK_3976 4385900 4386757 - RNA polymerase%2C sigma 32 subunit%2C RpoH TIGRFAM: RNA polymerase sigma factor RpoH%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: yps:YPTB0224 RNA polymerase sigma-32 factor gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3976 YPK_3977 YPK_3977 YPK_3977 4387068 4388021 - protein insertion ABC transporter%2C inner membrane subunit FtsX TIGRFAM: protein insertion ABC transporter%2C inner membrane subunit FtsX~PFAM: protein of unknown function DUF214~KEGG: ypa:YPA_0210 cell division protein gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3977 YPK_3978 YPK_3978 YPK_3978 4388011 4388679 - Type II (General) Secretory Pathway (IISP) Family protein KEGG: yen:YE0226 cell division ATP-binding protein~TIGRFAM: cell division ATP-binding protein FtsE%3B Type II (General) Secretory Pathway (IISP) Family protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3978 YPK_3979 YPK_3979 YPK_3979 4388685 4390256 - signal recognition particle-docking protein FtsY KEGG: ypn:YPN_0150 cell division protein~TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3979 YPK_3980 YPK_3980 YPK_3980 4390538 4391200 + methyltransferase TIGRFAM: methyltransferase~PFAM: conserved hypothetical protein~KEGG: ypa:YPA_0207 hypothetical protein gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3980 YPK_3981 YPK_3981 YPK_3981 4391190 4391462 + protein of unknown function DUF1145 PFAM: protein of unknown function DUF1145~KEGG: ypa:YPA_0206 hypothetical protein gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3981 YPK_3982 YPK_3982 YPK_3982 4391649 4392068 - conserved hypothetical protein KEGG: ypa:YPA_0205 hypothetical protein gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3982 YPK_3983 YPK_3983 YPK_3983 4392280 4392600 - Domain of unknown function DUF1820 PFAM: Domain of unknown function DUF1820~KEGG: ypi:YpsIP31758_0235 hypothetical protein gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3983 YPK_3984 YPK_3984 YPK_3984 4392890 4393516 + YhhN family protein PFAM: YhhN family protein~KEGG: ypm:YP_3229 hypothetical protein gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3984 YPK_3985 YPK_3985 YPK_3985 4393930 4396278 + heavy metal translocating P-type ATPase TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B cadmium-translocating P-type ATPase%3B heavy metal translocating P-type ATPase~PFAM: Haloacid dehalogenase domain protein hydrolase%3B Heavy metal transport/detoxification protein%3B E1-E2 ATPase-associated domain protein~KEGG: ypa:YPA_0202 putative P-type cation-translocating membrane ATPase gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3985 YPK_3986 YPK_3986 YPK_3986 4396343 4396597 - SirA family protein PFAM: SirA family protein~KEGG: ypa:YPA_0201 hypothetical protein gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3986 YPK_3987 YPK_3987 YPK_3987 4396881 4397549 + conserved hypothetical integral membrane protein TIGRFAM: conserved hypothetical integral membrane protein~PFAM: protein of unknown function DUF165~KEGG: ypi:YpsIP31758_0231 hypothetical protein gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3987 YPK_3988 YPK_3988 YPK_3988 4397679 4398206 + putative lipoprotein KEGG: ypi:YpsIP31758_0230 putative lipoprotein gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3988 YPK_3989 YPK_3989 YPK_3989 4398350 4399597 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit TIGRFAM: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein~KEGG: ypp:YPDSF_3441 anaerobic glycerol-3-phosphate dehydrogenase subunit C gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3989 YPK_3990 YPK_3990 YPK_3990 4399642 4400916 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit KEGG: ypp:YPDSF_3442 anaerobic glycerol-3-phosphate dehydrogenase subunit B~TIGRFAM: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3990 YPK_3991 YPK_3991 YPK_3991 4400906 4402561 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit TIGRFAM: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit~PFAM: FAD dependent oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein~KEGG: ypa:YPA_0196 anaerobic glycerol-3-phosphate dehydrogenase subunit A gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3991 YPK_3992 YPK_3992 YPK_3992 4403186 4404301 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: yps:YPTB0208 glycerophosphoryl diester phosphodiesterase gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3992 YPK_3993 YPK_3993 YPK_3993 4404375 4405574 - conserved hypothetical protein KEGG: ypa:YPA_0194 hypothetical protein gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3993 YPK_3994 YPK_3994 YPK_3994 4405837 4406646 - Cof-like hydrolase TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase%3B Haloacid dehalogenase domain protein hydrolase type 3~KEGG: ypa:YPA_0193 putative haloacid dehalogenase-like hydrolase gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3994 YPK_3995 YPK_3995 YPK_3995 4406681 4407676 - Lysophospholipase PFAM: alpha/beta hydrolase fold~KEGG: ypa:YPA_0192 putative lysophospholipase gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3995 YPK_3996 YPK_3996 YPK_3996 4407890 4408510 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ypa:YPA_0191 putative homoserine/homoserine lactone efflux protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3996 YPK_3997 YPK_3997 YPK_3997 4408561 4409181 - homoserine/threonine efflux pump TIGRFAM: homoserine/threonine efflux pump~PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ypa:YPA_0190 threonine efflux protein gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3997 YPK_3998 YPK_3998 YPK_3998 4409288 4411081 - ATP-dependent DNA helicase RecQ KEGG: ypa:YPA_0189 ATP-dependent DNA helicase~TIGRFAM: ATP-dependent DNA helicase%2C RecQ family%3B ATP-dependent DNA helicase RecQ~PFAM: helicase domain protein%3B HRDC domain protein%3B DEAD/DEAH box helicase domain protein%3B Helicase superfamily 1 and 2 ATP-binding~SMART: DEAD-like helicases gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3998 YPK_3999 YPK_3999 YPK_3999 4411197 4412075 - Phospholipase A(2) PFAM: phospholipase A1~KEGG: ypa:YPA_0188 phospholipase A gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_3999 YPK_4000 YPK_4000 YPK_4000 4412297 4412767 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ypa:YPA_0187 hypothetical protein gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4000 YPK_4001 YPK_4001 YPK_4001 4412854 4413744 + RarD protein%2C DMT superfamily transporter TIGRFAM: RarD protein%2C DMT superfamily transporter~PFAM: protein of unknown function DUF6 transmembrane~KEGG: ypa:YPA_0186 hypothetical protein gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4001 YPK_4002 YPK_4002 YPK_4002 4413842 4414792 - magnesium and cobalt transport protein CorA TIGRFAM: magnesium and cobalt transport protein CorA~PFAM: Mg2 transporter protein CorA family protein~KEGG: ypi:YpsIP31758_0214 magnesium and cobalt transport protein CorA gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4002 YPK_4003 YPK_4003 YPK_4003 4414974 4415093 + hypothetical protein gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4003 YPK_4004 YPK_4004 YPK_4004 4415441 4416271 - conserved hypothetical protein KEGG: ypa:YPA_0184 hypothetical protein gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4004 YPK_4005 YPK_4005 YPK_4005 4416297 4417529 - protein of unknown function UPF0261 PFAM: protein of unknown function UPF0261~KEGG: ypi:YpsIP31758_0211 hypothetical protein gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4005 YPK_4006 YPK_4006 YPK_4006 4417957 4418643 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypp:YPDSF_3457 TetR-family regulatory protein gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4006 YPK_4007 YPK_4007 YPK_4007 4418757 4420919 - DNA helicase II TIGRFAM: DNA helicase II~PFAM: UvrD/REP helicase~KEGG: ypi:YpsIP31758_0209 DNA helicase II gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4007 YPK_4008 YPK_4008 YPK_4008 4421019 4421735 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ypa:YPA_0180 putative haloacid dehalogenase-like hydrolase gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4008 YPK_4009 YPK_4009 YPK_4009 4421735 4422646 - tyrosine recombinase XerC TIGRFAM: tyrosine recombinase XerC~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: ypa:YPA_0179 putative integrase/recombinase gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4009 YPK_4010 YPK_4010 YPK_4010 4422643 4423347 - protein of unknown function DUF484 PFAM: protein of unknown function DUF484~KEGG: ypa:YPA_0178 hypothetical protein gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4010 YPK_4011 YPK_4011 YPK_4011 4423412 4424236 - Diaminopimelate epimerase PFAM: diaminopimelate epimerase~KEGG: ypi:YpsIP31758_0205 diaminopimelate epimerase gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4011 YPK_4012 YPK_4012 YPK_4012 4424419 4424619 - putative lipoprotein KEGG: ypi:YpsIP31758_0204 putative lipoprotein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4012 YPK_4013 YPK_4013 YPK_4013 4424753 4425073 + iron donor protein CyaY TIGRFAM: iron donor protein CyaY~PFAM: Frataxin family protein~KEGG: ypp:YPDSF_3464 frataxin-like protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4013 YPK_4014 YPK_4014 YPK_4014 4425212 4425346 + hypothetical protein gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4014 YPK_4015 YPK_4015 YPK_4015 4425317 4427869 - putative adenylate cyclase PFAM: adenylate cyclase class-I~KEGG: ypp:YPDSF_3465 adenylate cyclase gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4015 YPK_4016 YPK_4016 YPK_4016 4428363 4429304 + porphobilinogen deaminase KEGG: ypa:YPA_0172 porphobilinogen deaminase~TIGRFAM: porphobilinogen deaminase~PFAM: Porphobilinogen deaminase gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4016 YPK_4017 YPK_4017 YPK_4017 4429301 4430050 + Uroporphyrinogen-III synthase PFAM: Uroporphyrinogen III synthase HEM4~KEGG: ypi:YpsIP31758_0197 uroporphyrinogen-III synthase gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4017 YPK_4018 YPK_4018 YPK_4018 4430081 4431205 + protein of unknown function DUF513 hemX PFAM: protein of unknown function DUF513 hemX~KEGG: ypi:YpsIP31758_0196 putative uroporphyrinogen III methylase gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4018 YPK_4019 YPK_4019 YPK_4019 4431208 4432428 + HemY protein TIGRFAM: HemY protein~PFAM: HemY domain protein%3B Tetratricopeptide TPR_2 repeat protein~KEGG: yps:YPTB0181 putative protoheme IX biogenesis protein gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4019 YPK_4021 YPK_4021 YPK_4021 4433907 4435298 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: ypa:YPA_0164 putative permease protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4021 YPK_4022 YPK_4022 YPK_4022 4435827 4436567 - glycosyl transferase%2C WecB/TagA/CpsF family KEGG: ypi:YpsIP31758_0193 glycosyl transferase%2C WecB/TagA/CpsF family~TIGRFAM: glycosyl transferase%2C WecB/TagA/CpsF family~PFAM: glycosyl transferase WecB/TagA/CpsF gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4022 YPK_4023 YPK_4023 YPK_4023 4436576 4437940 - WzyE family protein PFAM: WzyE family protein~KEGG: ypa:YPA_0162 4-alpha-L-fucosyltransferase gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4023 YPK_4024 YPK_4024 YPK_4024 4437937 4439022 - 4-alpha-L-fucosyltransferase PFAM: 4-alpha-L-fucosyltransferase~KEGG: yps:YPTB0177 TDP-Fuc4NAc:lipid II Fuc4NAc transferase gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4024 YPK_4025 YPK_4025 YPK_4025 4439045 4440301 - polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein~KEGG: yps:YPTB0176 putative PST family O-antigen export (flippase) gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4025 YPK_4026 YPK_4026 YPK_4026 4440303 4441433 - TDP-4-keto-6-deoxy-D-glucose transaminase TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: ypi:YpsIP31758_0189 TDP-4-keto-6-deoxy-D-glucose transaminase gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4026 YPK_4027 YPK_4027 YPK_4027 4441435 4442172 - TDP-D-fucosamine acetyltransferase TIGRFAM: TDP-D-fucosamine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~KEGG: ypa:YPA_0158 putative lipopolysaccharide biosynthesis protein gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4027 YPK_4028 YPK_4028 YPK_4028 4442150 4443082 - glucose-1-phosphate thymidylyltransferase TIGRFAM: glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~KEGG: ypn:YPN_0102 glucose-1-phosphate thymidylyltransferase gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4028 YPK_4029 YPK_4029 YPK_4029 4443326 4444393 - dTDP-glucose 4%2C6-dehydratase TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase%3B short-chain dehydrogenase/reductase SDR%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B dTDP-4-dehydrorhamnose reductase%3B Male sterility domain~KEGG: ypi:YpsIP31758_0186 dTDP-glucose 4%2C6-dehydratase gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4029 YPK_4030 YPK_4030 YPK_4030 4444390 4445652 - nucleotide sugar dehydrogenase TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase~KEGG: ypa:YPA_0155 putative UDP-glucose/GDP-mannose dehydrogenase gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4030 YPK_4031 YPK_4031 YPK_4031 4445649 4446779 - UDP-N-acetylglucosamine 2-epimerase PFAM: UDP-N-acetylglucosamine 2-epimerase~KEGG: ypi:YpsIP31758_0184 UDP-N-acetylglucosamine 2-epimerase gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4031 YPK_4032 YPK_4032 YPK_4032 4447128 4448204 - lipopolysaccharide biosynthesis protein PFAM: lipopolysaccharide biosynthesis protein~KEGG: ypi:YpsIP31758_0183 chain length determinant family protein gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4032 YPK_4033 YPK_4033 YPK_4033 4448225 4449307 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase~PFAM: glycosyl transferase family 4~KEGG: ypa:YPA_0152 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4033 YPK_4034 YPK_4034 YPK_4034 4449857 4451116 - transcription termination factor Rho KEGG: ypa:YPA_0151 transcription termination factor~TIGRFAM: transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor domain protein%3B Rho termination factor RNA-binding%3B Ribonuclease B OB region domain~SMART: AAA ATPase%3B Cold shock protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4034 YPK_4035 YPK_4035 YPK_4035 4451596 4451922 - thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: ypi:YpsIP31758_0179 thioredoxin gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4035 YPK_4036 YPK_4036 YPK_4036 4452041 4453327 + DEAD/DEAH box helicase domain protein PFAM: helicase domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases~KEGG: ypi:YpsIP31758_0178 ATP-dependent RNA helicase RhlB gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4036 YPK_4037 YPK_4037 YPK_4037 4453331 4454827 + Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: ypm:YP_3175 exopolyphosphatase gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4037 YPK_4038 YPK_4038 YPK_4038 4454995 4457016 - ATP-dependent DNA helicase Rep TIGRFAM: ATP-dependent DNA helicase Rep~PFAM: UvrD/REP helicase~KEGG: yps:YPTB0163 ATP-dependent DNA helicase Rep gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4038 YPK_4039 YPK_4039 YPK_4039 4457033 4457200 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0174 hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4039 YPK_4040 YPK_4040 YPK_4040 4457205 4457501 + PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: ypm:YP_3172 peptidyl-prolyl cis-trans isomerase C gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4040 YPK_4041 YPK_4041 YPK_4041 4457740 4458531 + glutamine cyclotransferase PFAM: glutamine cyclotransferase~KEGG: ypi:YpsIP31758_0172 glutamine cyclotransferase gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4041 YPK_4042 YPK_4042 YPK_4042 4459323 4459853 + Fimbrial protein PFAM: Fimbrial protein~KEGG: ypa:YPA_0142 putative fimbrial protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4042 YPK_4043 YPK_4043 YPK_4043 4459917 4460648 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: ypp:YPDSF_3493 fimbrial chaperone gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4043 YPK_4044 YPK_4044 YPK_4044 4460676 4463327 + fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein~KEGG: ypi:YpsIP31758_0169 fimbrial usher protein gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4044 YPK_4045 YPK_4045 YPK_4045 4463363 4464730 + conserved hypothetical protein KEGG: yps:YPTB0157 hypothetical protein gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4045 YPK_4046 YPK_4046 YPK_4046 4464696 4465514 + pili assembly chaperone PFAM: pili assembly chaperone~KEGG: ypp:YPDSF_3496 chaperone protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4046 YPK_4047 YPK_4047 YPK_4047 4466149 4466406 - Colicin immunity protein/pyocin immunity protein PFAM: Colicin immunity protein/pyocin immunity protein~KEGG: ypn:YPN_0081 colicin immunity protein gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4047 YPK_4048 YPK_4048 YPK_4048 4466408 4466659 - HNH endonuclease PFAM: HNH endonuclease~SMART: HNH nuclease~KEGG: ypa:YPA_0135 colicin gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4048 YPK_4049 YPK_4049 YPK_4049 4466912 4467175 - conserved hypothetical protein KEGG: yps:YPTB0147 hypothetical protein gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4049 YPK_4050 YPK_4050 YPK_4050 4467175 4469013 - S-type Pyocin domain protein PFAM: S-type Pyocin domain protein~KEGG: ype:YPO3886 colicin (partial) gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4050 YPK_4051 YPK_4051 YPK_4051 4469193 4470671 - ketol-acid reductoisomerase KEGG: ypi:YpsIP31758_0163 ketol-acid reductoisomerase~TIGRFAM: ketol-acid reductoisomerase~PFAM: acetohydroxy acid isomeroreductase%3B Acetohydroxy acid isomeroreductase catalytic domain protein gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4051 YPK_4052 YPK_4052 YPK_4052 4470957 4471838 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypa:YPA_0131 LysR-family transcriptional regulatory protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4052 YPK_4053 YPK_4053 YPK_4053 4471893 4472102 - conserved hypothetical protein KEGG: ypa:YPA_0130 hypothetical protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4053 YPK_4054 YPK_4054 YPK_4054 4472750 4473628 + conserved hypothetical protein KEGG: yps:YPTB0142 hypothetical protein gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4054 YPK_4055 YPK_4055 YPK_4055 4473612 4474073 + protein of unknown function DUF943 PFAM: protein of unknown function DUF943~KEGG: yps:YPTB0141 hypothetical protein gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4055 YPK_4056 YPK_4056 YPK_4056 4474204 4475748 - threonine dehydratase%2C biosynthetic TIGRFAM: threonine dehydratase%2C biosynthetic~PFAM: Threonine dehydratase domain protein%3B Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ypa:YPA_0125 threonine dehydratase gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4056 YPK_4057 YPK_4057 YPK_4057 4475754 4477604 - dihydroxy-acid dehydratase KEGG: ypp:YPDSF_3510 dihydroxy-acid dehydratase~TIGRFAM: dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4057 YPK_4058 YPK_4058 YPK_4058 4477612 4477809 - hypothetical protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4058 YPK_4059 YPK_4059 YPK_4059 4477933 4478859 - branched-chain amino acid aminotransferase TIGRFAM: branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV~KEGG: ypa:YPA_0123 branched-chain amino acid aminotransferase gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4059 YPK_4060 YPK_4060 YPK_4060 4478882 4479139 - acetolactate synthase isozyme II small subunit KEGG: ypi:YpsIP31758_0155 acetolactate synthase isozyme II small subunit gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4060 YPK_4061 YPK_4061 YPK_4061 4479136 4480782 - acetolactate synthase%2C large subunit%2C biosynthetic type TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: yps:YPTB0134 acetolactate synthase isozyme II large subunit gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4061 YPK_4062 YPK_4062 YPK_4062 4481405 4482928 + Mg chelatase%2C subunit ChlI KEGG: yps:YPTB0133 putative magnesium chelatase family protein~TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4062 YPK_4063 YPK_4063 YPK_4063 4483185 4483523 - protein of unknown function DUF413 PFAM: protein of unknown function DUF413~KEGG: ypi:YpsIP31758_0152 hypothetical protein gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4063 YPK_4064 YPK_4064 YPK_4064 4483642 4484523 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0150 substrate-binding transcriptional regulator%2C LysR family gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4064 YPK_4065 YPK_4065 YPK_4065 4484510 4485502 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypa:YPA_0117 putative sugar transport system permease gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4065 YPK_4066 YPK_4066 YPK_4066 4485502 4486500 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: ypa:YPA_0116 putative sugar transport system permease gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4066 YPK_4067 YPK_4067 YPK_4067 4486533 4488023 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ypa:YPA_0115 putative sugar transport system ATP-binding protein gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4067 YPK_4068 YPK_4068 YPK_4068 4488109 4489065 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: ypa:YPA_0114 putative periplasmic protein precursor gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4068 YPK_4072 YPK_4072 YPK_4072 4495923 4496786 - glutamate racemase KEGG: ypi:YpsIP31758_0143 glutamate racemase~TIGRFAM: glutamate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4072 YPK_4073 YPK_4073 YPK_4073 4496731 4498623 - TonB-dependent vitamin B12 receptor TIGRFAM: TonB-dependent vitamin B12 receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ypi:YpsIP31758_0142 TonB-dependent vitamin B12 receptor gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4073 YPK_4074 YPK_4074 YPK_4074 4499085 4500188 + tRNA (uracil-5-)-methyltransferase KEGG: ypa:YPA_0111 tRNA (uracil-5)-methyltransferase~TIGRFAM: tRNA (uracil-5-)-methyltransferase~PFAM: (Uracil-5)-methyltransferase gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4074 YPK_4075 YPK_4075 YPK_4075 4500322 4500729 - protein of unknown function DUF1422 PFAM: protein of unknown function DUF1422~KEGG: ypi:YpsIP31758_0140 hypothetical protein gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4075 YPK_4076 YPK_4076 YPK_4076 4500742 4501377 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypa:YPA_0109 TetR-family transcriptional regulatory protein gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4076 YPK_4077 YPK_4077 YPK_4077 4501410 4501505 - hypothetical protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4077 YPK_4078 YPK_4078 YPK_4078 4501595 4502995 + pyridine nucleotide-disulphide oxidoreductase dimerisation region PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region%3B FAD dependent oxidoreductase~KEGG: ypi:YpsIP31758_0137 soluble pyridine nucleotide transhydrogenase gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4078 YPK_4079 YPK_4079 YPK_4079 4502978 4503895 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0138 hydrogen peroxide-inducible genes activator gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4079 YPK_4080 YPK_4080 YPK_4080 4504042 4504773 + glutaredoxin-family domain protein KEGG: ypa:YPA_0106 putative peroxiredoxin/glutaredoxin family protein~TIGRFAM: glutaredoxin-family domain protein~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B glutaredoxin%3B Redoxin domain protein gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4080 YPK_4081 YPK_4081 YPK_4081 4504867 4506330 + pyridine nucleotide-disulphide oxidoreductase dimerisation region PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B glucose-inhibited division protein A%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~KEGG: ypm:YP_3131 putative pyridine nucleotide-disulphide oxidoreductase gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4081 YPK_4082 YPK_4082 YPK_4082 4506446 4507249 - TonB family protein TIGRFAM: TonB family protein~KEGG: ypp:YPDSF_3530 membrane protein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4082 YPK_4083 YPK_4083 YPK_4083 4507314 4508642 - type I secretion membrane fusion protein%2C HlyD family TIGRFAM: type I secretion membrane fusion protein%2C HlyD family~PFAM: secretion protein HlyD family protein~KEGG: ypi:YpsIP31758_0133 HlyD family hemolysin secretion protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4083 YPK_4084 YPK_4084 YPK_4084 4508718 4510526 - type I secretion system ATPase KEGG: yps:YPTB0115 ABC transporter protein%2C fused permease and ATP binding domains~TIGRFAM: type I secretion system ATPase~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4084 YPK_4085 YPK_4085 YPK_4085 4510692 4511309 - Heme-binding A family protein PFAM: Heme-binding A family protein~KEGG: ypa:YPA_0101 hemophore HasA gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4085 YPK_4086 YPK_4086 YPK_4086 4511531 4513882 - TonB-dependent heme/hemoglobin receptor family protein TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor%3B TonB-dependent heme/hemoglobin receptor family protein~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: yps:YPTB0113 putative TonB dependent receptor protein gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4086 YPK_4087 YPK_4087 YPK_4087 4514621 4515994 - argininosuccinate lyase TIGRFAM: argininosuccinate lyase~PFAM: fumarate lyase~KEGG: ypa:YPA_0099 putative argininosuccinate lyase gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4087 YPK_4088 YPK_4088 YPK_4088 4516161 4516937 - acetylglutamate kinase TIGRFAM: acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: ypa:YPA_0098 acetylglutamate kinase gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4088 YPK_4089 YPK_4089 YPK_4089 4517117 4518121 - N-acetyl-gamma-glutamyl-phosphate reductase KEGG: ypi:YpsIP31758_0127 N-acetyl-gamma-glutamyl-phosphate reductase~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4089 YPK_4090 YPK_4090 YPK_4090 4518372 4519535 + acetylornithine deacetylase (ArgE) KEGG: ypi:YpsIP31758_0126 acetylornithine deacetylase (ArgE)~TIGRFAM: acetylornithine deacetylase (ArgE)~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4090 YPK_4091 YPK_4091 YPK_4091 4519909 4522545 + Phosphoenolpyruvate carboxylase PFAM: phosphoenolpyruvate carboxylase~KEGG: ypi:YpsIP31758_0125 phosphoenolpyruvate carboxylase gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4091 YPK_4092 YPK_4092 YPK_4092 4523104 4523271 + hypothetical protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4092 YPK_4093 YPK_4093 YPK_4093 4523439 4524323 - 5%2C10-methylenetetrahydrofolate reductase KEGG: ypi:YpsIP31758_0123 5%2C10-methylenetetrahydrofolate reductase~TIGRFAM: 5%2C10-methylenetetrahydrofolate reductase~PFAM: methylenetetrahydrofolate reductase gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4093 YPK_4094 YPK_4094 YPK_4094 4524556 4526991 - aspartate kinase KEGG: ypa:YPA_0265 bifunctional aspartokinase/homoserine dehydrogenase II~TIGRFAM: aspartate kinase~PFAM: aspartate/glutamate/uridylate kinase%3B homoserine dehydrogenase%3B homoserine dehydrogenase NAD-binding gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4094 YPK_4095 YPK_4095 YPK_4095 4526994 4528235 - O-succinylhomoserine (thiol)-lyase KEGG: ypm:YP_0117 cystathionine beta-lyases/cystathionine gamma-synthases~TIGRFAM: O-succinylhomoserine (thiol)-lyase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4095 YPK_4096 YPK_4096 YPK_4096 4528532 4528849 + methionine repressor%2C MetJ PFAM: Methionine repressor MetJ~KEGG: yen:YE0110 transcriptional repressor protein gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4096 YPK_4097 YPK_4097 YPK_4097 4529198 4529653 + YiaAB two helix domain protein PFAM: YiaAB two helix domain protein~KEGG: ypi:YpsIP31758_0119 YiaA/B two helix domain protein gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4097 YPK_4098 YPK_4098 YPK_4098 4530178 4530393 - ribosomal protein L31 PFAM: ribosomal protein L31~KEGG: ypi:YpsIP31758_0118 ribosomal protein L31 gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4098 YPK_4099 YPK_4099 YPK_4099 4530646 4532844 + primosomal protein N' KEGG: yps:YPTB0101 primosomal protein n~TIGRFAM: primosomal protein N'~PFAM: helicase domain protein%3B type III restriction protein res subunit%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4099 YPK_4100 YPK_4100 YPK_4100 4532931 4533074 + hypothetical protein gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4100 YPK_4101 YPK_4101 YPK_4101 4533197 4534225 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~KEGG: ypm:YP_0110 transcriptional repressor gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4101 YPK_4102 YPK_4102 YPK_4102 4534390 4535136 + cell division protein FtsN TIGRFAM: cell division protein FtsN~PFAM: Sporulation domain protein~KEGG: ypi:YpsIP31758_0114 cell division protein FtsN gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4102 YPK_4103 YPK_4103 YPK_4103 4535236 4535760 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: ypi:YpsIP31758_0113 ATP-dependent protease HslV gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4103 YPK_4104 YPK_4104 YPK_4104 4535831 4537162 + heat shock protein HslVU%2C ATPase subunit HslU KEGG: ypi:YpsIP31758_0112 heat shock protein HslVU%2C ATPase subunit HslU~TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU~PFAM: ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4104 YPK_4105 YPK_4105 YPK_4105 4537397 4538314 + 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase TIGRFAM: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~PFAM: UbiA prenyltransferase~KEGG: ypi:YpsIP31758_0111 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4105 YPK_4106 YPK_4106 YPK_4106 4538456 4538941 + regulator of ribonuclease activity A TIGRFAM: regulator of ribonuclease activity A~PFAM: Dimethylmenaquinone methyltransferase~KEGG: ypi:YpsIP31758_0110 regulator of ribonuclease activity A gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4106 YPK_4107 YPK_4107 YPK_4107 4539058 4539642 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0109 hypothetical protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4107 YPK_4108 YPK_4108 YPK_4108 4540272 4540511 - conserved hypothetical protein KEGG: ypm:YP_0102 hypothetical protein gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4108 YPK_4109 YPK_4109 YPK_4109 4540724 4542016 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: ypi:YpsIP31758_0106 auxiliary transport protein%2C membrane fusion protein (MFP) family gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4109 YPK_4110 YPK_4110 YPK_4110 4542009 4544123 + ABC transporter related PFAM: ABC transporter transmembrane region%3B ABC transporter related%3B peptidase C39 bacteriocin processing~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0105 bacteriocin ABC transporter%2C ATP-binding/permease protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4110 YPK_4111 YPK_4111 YPK_4111 4544464 4544703 - protein of unknown function DUF904 PFAM: protein of unknown function DUF904~KEGG: ypi:YpsIP31758_0103 hypothetical protein gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4111 YPK_4112 YPK_4112 YPK_4112 4545427 4546275 + MIP family channel protein TIGRFAM: MIP family channel protein~PFAM: major intrinsic protein~KEGG: ypm:YP_0095 glycerol uptake facilitator protein gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4112 YPK_4113 YPK_4113 YPK_4113 4546452 4547975 + glycerol kinase TIGRFAM: glycerol kinase~PFAM: carbohydrate kinase FGGY~KEGG: ypm:YP_0094 glycerol kinase gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4113 YPK_4114 YPK_4114 YPK_4114 4548228 4549238 + fructose-1%2C6-bisphosphatase%2C class II TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II~PFAM: GlpX family protein~KEGG: ypm:YP_0093 fructose-1%2C6-bisphosphatase II / sedoheptulose-1%2C7-bisphosphatase gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4114 YPK_4115 YPK_4115 YPK_4115 4549393 4550139 + oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ypk:y0049 ferredoxin-NADP reductase gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4115 YPK_4116 YPK_4116 YPK_4116 4550497 4550865 - protein of unknown function DUF805 PFAM: protein of unknown function DUF805~KEGG: ypm:YP_0091 hypothetical protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4116 YPK_4117 YPK_4117 YPK_4117 4551079 4551714 + protein of unknown function DUF1454 PFAM: protein of unknown function DUF1454~KEGG: yps:YPTB0082 hypothetical protein gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4117 YPK_4118 YPK_4118 YPK_4118 4551843 4552610 + Triose-phosphate isomerase PFAM: triosephosphate isomerase~KEGG: ypm:YP_0089 triosephosphate isomerase gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4118 YPK_4119 YPK_4119 YPK_4119 4552827 4554005 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: ypi:YpsIP31758_0095 substrate-binding transcriptional regulator%2C LysR family gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4119 YPK_4120 YPK_4120 YPK_4120 4554199 4554936 + LmbE family protein PFAM: LmbE family protein~KEGG: ypm:YP_0087 uncharacterized proteins%2C LmbE homologs gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4120 YPK_4121 YPK_4121 YPK_4121 4554933 4555646 + 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase~PFAM: Dimethylmenaquinone methyltransferase~KEGG: ypk:y0055 hypothetical protein gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4121 YPK_4122 YPK_4122 YPK_4122 4555712 4557139 + anion transporter TIGRFAM: anion transporter~PFAM: sodium/sulphate symporter%3B Citrate transporter~KEGG: ypm:YP_0083 putative membrane transport protein gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4122 YPK_4123 YPK_4123 YPK_4123 4557257 4558033 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: yps:YPTB0076 possible ABC transporter%2C periplasmic molybdate binding protein gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4123 YPK_4124 YPK_4124 YPK_4124 4558065 4558205 - hypothetical protein gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4124 YPK_4125 YPK_4125 YPK_4125 4558283 4559272 - sulfate ABC transporter%2C periplasmic sulfate-binding protein TIGRFAM: sulfate ABC transporter%2C periplasmic sulfate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_0090 sulfate ABC transporter%2C sulfate-binding protein gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4125 YPK_4126 YPK_4126 YPK_4126 4559493 4560476 - 6-phosphofructokinase KEGG: yps:YPTB0074 6-phosphofructokinase~TIGRFAM: 6-phosphofructokinase~PFAM: phosphofructokinase gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4126 YPK_4127 YPK_4127 YPK_4127 4560694 4561596 - cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: ypm:YP_0079 ferrous iron efflux protein F gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4127 YPK_4128 YPK_4128 YPK_4128 4561730 4561852 + transposase%2C IS4 family protein KEGG: shw:Sputw3181_2043 transposase%2C IS4 family protein gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4128 YPK_4129 YPK_4129 YPK_4129 4562158 4563117 - putative transposase YhgA family protein PFAM: putative transposase YhgA family protein~KEGG: ypm:YP_0077 hypothetical protein gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4129 YPK_4130 YPK_4130 YPK_4130 4563437 4563544 - hypothetical protein gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4130 YPK_4131 YPK_4131 YPK_4131 4563793 4564281 - protein of unknown function Spy-related PFAM: protein of unknown function Spy-related~KEGG: ypi:YpsIP31758_0085 hypothetical protein gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4131 YPK_4132 YPK_4132 YPK_4132 4564455 4565153 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~KEGG: ypm:YP_0074 two component system response regulatory protein gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4132 YPK_4133 YPK_4133 YPK_4133 4565150 4566526 + integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ypm:YP_0073 two component sensor kinase gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4133 YPK_4134 YPK_4134 YPK_4134 4566575 4567639 - transcriptional regulator%2C AraC family TIGRFAM: methylated-DNA--protein-cysteine methyltransferase~PFAM: helix-turn-helix- domain containing protein AraC type%3B Ada metal-binding domain protein%3B methylguanine DNA methyltransferase ribonuclease domain protein%3B Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding~KEGG: ypm:YP_0072 bifunctional regulatory protein/DNA repair protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4134 YPK_4135 YPK_4135 YPK_4135 4567828 4568316 + RNA methyltransferase%2C TrmH family%2C group 2 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 2~PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: ypi:YpsIP31758_0081 RNA methyltransferase%2C TrmH family%2C group 2 gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4135 YPK_4136 YPK_4136 YPK_4136 4568439 4569263 - serine O-acetyltransferase KEGG: ypm:YP_0070 serine acetyltransferase~TIGRFAM: serine O-acetyltransferase~PFAM: transferase hexapeptide repeat containing protein%3B serine acetyltransferase domain protein gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4136 YPK_4137 YPK_4137 YPK_4137 4569526 4570545 - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein%3B Ketopantoate reductase ApbA/PanE domain protein~KEGG: ypm:YP_0068 glycerol-3-phosphate dehydrogenase gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4137 YPK_4138 YPK_4138 YPK_4138 4570545 4571021 - protein-export protein SecB TIGRFAM: protein-export protein SecB~PFAM: protein export chaperone SecB~KEGG: ypi:YpsIP31758_0078 protein-export chaperone SecB gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4138 YPK_4139 YPK_4139 YPK_4139 4571109 4571357 - glutaredoxin 3 TIGRFAM: glutaredoxin 3~PFAM: glutaredoxin%3B glutaredoxin 2~KEGG: ypi:YpsIP31758_0077 glutaredoxin 3 gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4139 YPK_4140 YPK_4140 YPK_4140 4571476 4571910 - Rhodanese domain protein PFAM: Rhodanese domain protein~KEGG: ypi:YpsIP31758_0076 rhodanese domain protein gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4140 YPK_4141 YPK_4141 YPK_4141 4572307 4573854 + phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent KEGG: yps:YPTB0060 phosphoglyceromutase~TIGRFAM: phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~PFAM: metalloenzyme domain protein%3B BPG-independent PGAM domain protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4141 YPK_4142 YPK_4142 YPK_4142 4573882 4575234 + peptidase M23B PFAM: peptidase M23B~KEGG: ypp:YPDSF_3842 membrane protein gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4142 YPK_4143 YPK_4143 YPK_4143 4575258 4576268 + protein of unknown function DUF610 YibQ PFAM: protein of unknown function DUF610 YibQ~KEGG: ypi:YpsIP31758_0073 divergent polysaccharide deacetylase gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4143 YPK_4144 YPK_4144 YPK_4144 4576406 4577431 - L-threonine 3-dehydrogenase TIGRFAM: L-threonine 3-dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ypi:YpsIP31758_0072 L-threonine 3-dehydrogenase gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4144 YPK_4145 YPK_4145 YPK_4145 4577441 4578652 - 2-amino-3-ketobutyrate coenzyme A ligase KEGG: ypk:y0081 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase)~TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase~PFAM: glycine hydroxymethyltransferase%3B aminotransferase class I and II%3B aminotransferase class-III gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4145 YPK_4146 YPK_4146 YPK_4146 4578898 4579830 + ADP-L-glycero-D-manno-heptose-6-epimerase TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase~PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase~KEGG: ypi:YpsIP31758_0070 ADP-L-glycero-D-manno-heptose-6-epimerase gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4146 YPK_4147 YPK_4147 YPK_4147 4579861 4580925 + lipopolysaccharide heptosyltransferase II TIGRFAM: lipopolysaccharide heptosyltransferase II~PFAM: glycosyl transferase family 9~KEGG: ypi:YpsIP31758_0069 lipopolysaccharide heptosyltransferase II gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4147 YPK_4148 YPK_4148 YPK_4148 4580925 4581890 + lipopolysaccharide heptosyltransferase I TIGRFAM: lipopolysaccharide heptosyltransferase I~PFAM: glycosyl transferase family 9~KEGG: ypm:YP_0057 lipopolysaccharide heptosyltransferase-1 gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4148 YPK_4149 YPK_4149 YPK_4149 4582268 4583587 + Three-deoxy-D-manno-octulosonic-acid transferase domain protein PFAM: glycosyl transferase group 1%3B Three-deoxy-D-manno-octulosonic-acid transferase domain protein~KEGG: ypk:y0086 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4149 YPK_4150 YPK_4150 YPK_4150 4583588 4584370 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ypm:YP_0055 lipopolysaccharide core biosynthesis glycosyl transferase gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4150 YPK_4151 YPK_4151 YPK_4151 4584367 4584846 + pantetheine-phosphate adenylyltransferase KEGG: ypi:YpsIP31758_0065 pantetheine-phosphate adenylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4151 YPK_4152 YPK_4152 YPK_4152 4584852 4585661 - formamidopyrimidine-DNA glycosylase KEGG: ypm:YP_0053 formamidopyrimidine-DNA glycosylase~TIGRFAM: formamidopyrimidine-DNA glycosylase~PFAM: zinc finger Fpg domain protein%3B Formamidopyrimidine-DNA glycosylase catalytic domain protein%3B Formamidopyrimidine-DNA glycolase%2C H2TH DNA binding gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4152 YPK_4153 YPK_4153 YPK_4153 4585744 4585911 - ribosomal protein L33 PFAM: ribosomal protein L33~KEGG: ypm:YP_0052 50S ribosomal protein L33 gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4153 YPK_4154 YPK_4154 YPK_4154 4585923 4586159 - ribosomal protein L28 PFAM: ribosomal protein L28~KEGG: ypm:YP_0051 50S ribosomal protein L28 gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4154 YPK_4155 YPK_4155 YPK_4155 4586422 4587090 - DNA repair protein RadC PFAM: DNA repair protein RadC~KEGG: ypm:YP_0050 putative DNA repair protein gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4155 YPK_4156 YPK_4156 YPK_4156 4587170 4588501 + phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase KEGG: ypk:y0093 flavoprotein affecting synthesis of DNA and pantothenate metabolism~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase~PFAM: flavoprotein%3B DNA/pantothenate metabolism flavoprotein domain protein gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4156 YPK_4157 YPK_4157 YPK_4157 4588479 4588937 + deoxyuridine 5'-triphosphate nucleotidohydrolase Dut KEGG: ypm:YP_0048 deoxyuridine 5'-triphosphate nucleotidohydrolase~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~PFAM: deoxyUTP pyrophosphatase gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4157 YPK_4158 YPK_4158 YPK_4158 4589059 4589655 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ypi:YpsIP31758_0058 transcriptional regulator%2C TetR family gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4158 YPK_4159 YPK_4159 YPK_4159 4589790 4590437 - orotate phosphoribosyltransferase KEGG: ypi:YpsIP31758_0057 orotate phosphoribosyltransferase~TIGRFAM: orotate phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4159 YPK_4160 YPK_4160 YPK_4160 4590604 4591320 - ribonuclease PH KEGG: ypm:YP_0045 ribonuclease PH~TIGRFAM: ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2 gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4160 YPK_4161 YPK_4161 YPK_4161 4591447 4592310 + YicC domain protein PFAM: YicC domain protein%3B domain of unknown function DUF1732~KEGG: ypi:YpsIP31758_0055 conserved hypothetical protein TIGR00255 gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4161 YPK_4162 YPK_4162 YPK_4162 4592498 4593766 + integrase family protein PFAM: integrase family protein~KEGG: ypi:YpsIP31758_0054 site-specific recombinase%2C phage integrase family gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4162 YPK_4163 YPK_4163 YPK_4163 4593763 4594410 + hypothetical protein KEGG: kpn:KPN_02944 hypothetical protein gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4163 YPK_4164 YPK_4164 YPK_4164 4594631 4594966 + phage transcriptional regulator%2C AlpA PFAM: Prophage CP4-57 regulatory~KEGG: asa:ASA_3675 hypothetical protein gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4164 YPK_4165 YPK_4165 YPK_4165 4594966 4595385 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0051 hypothetical protein gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4165 YPK_4166 YPK_4166 YPK_4166 4595400 4596410 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0050 hypothetical protein gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4166 YPK_4167 YPK_4167 YPK_4167 4596407 4597459 + hypothetical protein KEGG: spe:Spro_3883 hypothetical protein gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4167 YPK_4168 YPK_4168 YPK_4168 4597452 4597643 + hypothetical protein gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4168 YPK_4169 YPK_4169 YPK_4169 4597636 4597830 + hypothetical protein gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4169 YPK_4170 YPK_4170 YPK_4170 4598331 4598519 + conserved hypothetical protein KEGG: ypi:YpsIP31758_0045 hypothetical protein gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4170 YPK_4171 YPK_4171 YPK_4171 4598536 4598907 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0044 hypothetical protein gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4171 YPK_4172 YPK_4172 YPK_4172 4598938 4599036 - hypothetical protein gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4172 YPK_4173 YPK_4173 YPK_4173 4599283 4601274 + putative transcriptional regulator PFAM: AAA-4 family protein~KEGG: sbm:Shew185_0048 putative transcriptional regulator gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4173 YPK_4174 YPK_4174 YPK_4174 4601975 4602592 + protein of unknown function UPF0126 PFAM: protein of unknown function UPF0126~KEGG: yps:YPTB0039 hypothetical protein gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4174 YPK_4175 YPK_4175 YPK_4175 4602612 4604315 - DNA ligase (NAD(+)) KEGG: ypm:YP_0042 putative DNA ligase~PFAM: NAD-dependent DNA ligase OB-fold%3B NAD-dependent DNA ligase adenylation~SMART: NAD-dependent DNA ligase gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4175 YPK_4176 YPK_4176 YPK_4176 4604716 4605339 + Guanylate kinase KEGG: ypm:YP_0041 guanylate kinase~PFAM: guanylate kinase~SMART: guanylate kinase/L-type calcium channel region gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4176 YPK_4177 YPK_4177 YPK_4177 4605394 4605669 + DNA-directed RNA polymerase%2C omega subunit TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~KEGG: yen:YE0046 DNA-directed RNA polymerase%2C omega chain gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4177 YPK_4178 YPK_4178 YPK_4178 4605689 4607797 + (p)ppGpp synthetase I%2C SpoT/RelA KEGG: ypm:YP_0039 guanosine-3'%2C5'-bisbis(diphosphate) 3'-pyrophosphydrolase~TIGRFAM: RelA/SpoT family protein~PFAM: TGS domain protein%3B metal-dependent phosphohydrolase HD sub domain%3B RelA/SpoT domain protein~SMART: metal-dependent phosphohydrolase HD region gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4178 YPK_4179 YPK_4179 YPK_4179 4607836 4608495 + tRNA guanosine-2'-O-methyltransferase PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: ypi:YpsIP31758_0038 tRNA guanosine-2'-O-methyltransferase gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4179 YPK_4180 YPK_4180 YPK_4180 4608496 4610577 + ATP-dependent DNA helicase RecG KEGG: ypm:YP_0037 ATP-dependent DNA helicase~TIGRFAM: ATP-dependent DNA helicase RecG~PFAM: helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicases gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4180 YPK_4181 YPK_4181 YPK_4181 4610943 4612157 - sodium/glutamate symporter PFAM: sodium/glutamate symporter~KEGG: ypm:YP_0036 sodium/glutamate symport carrier protein gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4181 YPK_4182 YPK_4182 YPK_4182 4612362 4613780 + uracil-xanthine permease TIGRFAM: uracil-xanthine permease%3B xanthine permease~PFAM: Xanthine/uracil/vitamin C permease~KEGG: ypk:y0107 transport protein%2C symporter gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4182 YPK_4183 YPK_4183 YPK_4183 4613926 4615635 + AsmA family protein PFAM: AsmA family protein~KEGG: yps:YPTB0030 possible exported protein gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4183 YPK_4184 YPK_4184 YPK_4184 4615770 4616693 - thioesterase domain protein TIGRFAM: thioesterase domain protein~PFAM: GCN5-related N-acetyltransferase%3B Thioesterase putative~KEGG: ypk:y0109 acetyltransferase gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4184 YPK_4185 YPK_4185 YPK_4185 4616879 4617316 - D-tyrosyl-tRNA(Tyr) deacylase PFAM: D-tyrosyl-tRNA(Tyr) deacylase~KEGG: ypm:YP_0030 D-Tyr-tRNAtyr deacylase gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4185 YPK_4186 YPK_4186 YPK_4186 4617323 4618207 - ribonuclease BN PFAM: ribonuclease BN~KEGG: ypi:YpsIP31758_0030 tRNA-processing ribonuclease BN gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4186 YPK_4187 YPK_4187 YPK_4187 4618304 4618894 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: yps:YPTB0026 hypothetical protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4187 YPK_4188 YPK_4188 YPK_4188 4619216 4621039 - GTP-binding protein TypA TIGRFAM: small GTP-binding protein%3B GTP-binding protein TypA~PFAM: elongation factor G domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein~KEGG: ypi:YpsIP31758_0028 GTP-binding protein TypA/BipA gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4188 YPK_4189 YPK_4189 YPK_4189 4621601 4623010 + glutamine synthetase%2C type I TIGRFAM: glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~KEGG: ypi:YpsIP31758_0027 glutamine synthetase%2C type I gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4189 YPK_4190 YPK_4190 YPK_4190 4623263 4624312 + signal transduction histidine kinase%2C nitrogen specific%2C NtrB PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: PAS domain containing protein~KEGG: ypm:YP_0024 two component regulatory protein involved in nitrogen assimilation gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4190 YPK_4191 YPK_4191 YPK_4191 4624320 4625732 + nitrogen metabolism transcriptional regulator%2C NtrC%2C Fis Family KEGG: ypi:YpsIP31758_0025 nitrogen regulation protein NR(I)~TIGRFAM: nitrogen regulation protein NR(I)~PFAM: response regulator receiver%3B sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4191 YPK_4192 YPK_4192 YPK_4192 4625786 4627159 - oxygen-independent coproporphyrinogen III oxidase KEGG: ypi:YpsIP31758_0024 oxygen-independent coproporphyrinogen III oxidase~TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4192 YPK_4193 YPK_4193 YPK_4193 4627342 4627908 - protein of unknown function DUF414 PFAM: protein of unknown function DUF414~KEGG: ypi:YpsIP31758_0023 hypothetical protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4193 YPK_4194 YPK_4194 YPK_4194 4628652 4629302 + GTP-binding protein HSR1-related PFAM: GTP-binding protein HSR1-related~KEGG: ypm:YP_0020 predicted GTPases gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4194 YPK_4195 YPK_4195 YPK_4195 4629710 4632508 - DNA polymerase I KEGG: ypp:YPDSF_3886 DNA polymerase I~TIGRFAM: DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease%3B 3'-5' exonuclease~SMART: Helix-hairpin-helix domain protein class 2 gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4195 YPK_4196 YPK_4196 YPK_4196 4632999 4633622 - DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: ypi:YpsIP31758_0020 thiol:disulfide interchange protein DsbA gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4196 YPK_4197 YPK_4197 YPK_4197 4633650 4634636 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: ypm:YP_0016 putative homoserine kinase type II (protein kinase fold) gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4197 YPK_4198 YPK_4198 YPK_4198 4634727 4634996 - protein of unknown function DUF1040 PFAM: protein of unknown function DUF1040~KEGG: ypi:YpsIP31758_0018 hypothetical protein gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4198 YPK_4199 YPK_4199 YPK_4199 4635150 4635737 + molybdopterin-guanine dinucleotide biosynthesis protein A TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: ypi:YpsIP31758_0017 molybdopterin-guanine dinucleotide biosynthesis protein A gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4199 YPK_4200 YPK_4200 YPK_4200 4635737 4636267 + molybdopterin-guanine dinucleotide biosynthesis protein B TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B~PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region~KEGG: ypm:YP_0013 probable molybdopterin-guanine dinucleotide biosynthesis protein B gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4200 YPK_4201 YPK_4201 YPK_4201 4636325 4637533 - transposase mutator type PFAM: transposase mutator type~KEGG: yps:YPTB3311 putative transposase gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4201 YPK_4202 YPK_4202 YPK_4202 4637654 4637884 - hypothetical protein gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4202 YPK_4206 YPK_4206 YPK_4206 4643733 4644422 + GntR domain protein PFAM: regulatory protein GntR HTH%3B GntR domain protein~KEGG: ypi:YpsIP31758_0011 transcriptional regulator%2C GntR family gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4206 YPK_4207 YPK_4207 YPK_4207 4644502 4645926 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ypi:YpsIP31758_0009 transporter%2C major facilitator family gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4207 YPK_4208 YPK_4208 YPK_4208 4645923 4646093 - conserved hypothetical protein KEGG: ypi:YpsIP31758_0010 hypothetical protein gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4208 YPK_4209 YPK_4209 YPK_4209 4646146 4647072 - ribokinase TIGRFAM: ribokinase~PFAM: PfkB domain protein%3B Phosphomethylpyrimidine kinase type-1~KEGG: ypi:YpsIP31758_0008 ribokinase gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4209 YPK_4210 YPK_4210 YPK_4210 4647123 4647542 - RbsD or FucU transport PFAM: RbsD or FucU transport~KEGG: ypi:YpsIP31758_0007 cytoplasmic D-ribose-binding protein RbsD gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4210 YPK_4211 YPK_4211 YPK_4211 4647747 4649615 - potassium uptake protein TIGRFAM: potassium uptake protein~PFAM: K potassium transporter~KEGG: ypi:YpsIP31758_0006 potassium uptake protein gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4211 YPK_4212 YPK_4212 YPK_4212 4649889 4651427 + ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: ypi:YpsIP31758_0005 putative ATPase RavA gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4212 YPK_4213 YPK_4213 YPK_4213 4651431 4652897 + von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: ypi:YpsIP31758_0004 protein ViaA gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4213 YPK_4214 YPK_4214 YPK_4214 4652996 4653988 - Aspartate--ammonia ligase PFAM: aspartate--ammonia ligase~KEGG: ypi:YpsIP31758_0003 aspartate--ammonia ligase gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4214 YPK_4215 YPK_4215 YPK_4215 4654158 4654619 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: ypi:YpsIP31758_0002 transcriptional regulator%2C AsnC family gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4215 YPK_4216 YPK_4216 YPK_4216 4654712 4655152 + flavodoxin/nitric oxide synthase PFAM: flavodoxin/nitric oxide synthase~KEGG: ypa:YPA_0001 putative flavoprotein gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4216 YPK_4217 YPK_4217 YPK_4217 4655533 4657422 + glucose inhibited division protein A TIGRFAM: glucose inhibited division protein A~PFAM: glucose-inhibited division protein A%3B FAD dependent oxidoreductase~KEGG: yps:YPTB3976 glucose inhibited division protein A gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4217 YPK_4218 YPK_4218 YPK_4218 4657567 4658187 + methyltransferase GidB TIGRFAM: methyltransferase GidB~PFAM: glucose inhibited division protein~KEGG: ypm:YP_4036 glucose inhibited division protein B gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4218 YPK_4219 YPK_4219 YPK_4219 4658854 4659237 + ATP synthase I chain PFAM: ATP synthase I chain~KEGG: ypm:YP_4035 ATP synthase protein I gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4219 YPK_4220 YPK_4220 YPK_4220 4659293 4660117 + ATP synthase F0%2C A subunit KEGG: ypm:YP_4034 ATP synthase subunit B protein~TIGRFAM: ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4220 YPK_4221 YPK_4221 YPK_4221 4660167 4660406 + ATP synthase F0%2C C subunit TIGRFAM: ATP synthase F0%2C C subunit~PFAM: H+transporting two-sector ATPase C subunit~KEGG: cko:CKO_00077 hypothetical protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4221 YPK_4222 YPK_4222 YPK_4222 4660468 4660938 + ATP synthase F0%2C B subunit TIGRFAM: ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit~KEGG: ypi:YpsIP31758_4180 ATP synthase F0%2C B subunit gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4222 YPK_4223 YPK_4223 YPK_4223 4660953 4661486 + ATP synthase F1%2C delta subunit KEGG: ypm:YP_4031 ATP synthase delta subunit protein~TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4223 YPK_4224 YPK_4224 YPK_4224 4661501 4663042 + ATP synthase F1%2C alpha subunit KEGG: ypm:YP_4030 ATP synthase alpha subunit protein~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein%3B ATP synthase F1 alpha subunit gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4224 YPK_4225 YPK_4225 YPK_4225 4663104 4663967 + ATP synthase F1%2C gamma subunit KEGG: ypi:YpsIP31758_4177 ATP synthase F1%2C gamma subunit~TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: H+transporting two-sector ATPase gamma subunit gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4225 YPK_4226 YPK_4226 YPK_4226 4664123 4665505 + ATP synthase F1%2C beta subunit KEGG: ypm:YP_4028 ATP synthase beta subunit protein~TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4226 YPK_4227 YPK_4227 YPK_4227 4665527 4665949 + ATP synthase F1%2C epsilon subunit TIGRFAM: ATP synthase F1%2C epsilon subunit~PFAM: H+transporting two-sector ATPase delta/epsilon subunit~KEGG: ypi:YpsIP31758_4175 ATP synthase F1%2C epsilon subunit gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4227 YPK_4228 YPK_4228 YPK_4228 4666570 4667940 + UDP-N-acetylglucosamine pyrophosphorylase TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase~PFAM: transferase hexapeptide repeat containing protein%3B Nucleotidyl transferase~KEGG: ypm:YP_4026 UDP-N-acetylglucosamine pyrophosphorylase gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4228 YPK_4229 YPK_4229 YPK_4229 4668141 4669970 + glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: glutamine amidotransferase class-II%3B sugar isomerase (SIS)~KEGG: yps:YPTB3964 D-fructose-6-phosphate amidotransferase gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4229 YPK_4230 YPK_4230 YPK_4230 4670129 4670248 - conserved hypothetical protein KEGG: ypi:YpsIP31758_4172 hypothetical protein gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4230 YPK_4231 YPK_4231 YPK_4231 4670453 4671493 + phosphate ABC transporter%2C periplasmic phosphate-binding protein TIGRFAM: phosphate ABC transporter%2C periplasmic phosphate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: ypi:YpsIP31758_4171 phosphate ABC transporter%2C phosphate-binding protein PstS gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4231 YPK_4232 YPK_4232 YPK_4232 4671722 4672678 + phosphate ABC transporter%2C inner membrane subunit PstC TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypk:y4130 inner membrane permease gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4232 YPK_4233 YPK_4233 YPK_4233 4672680 4673567 + phosphate ABC transporter%2C inner membrane subunit PstA TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ypm:YP_4022 putative phosphate transport system permease gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4233 YPK_4234 YPK_4234 YPK_4234 4673648 4674424 + phosphate ABC transporter%2C ATPase subunit KEGG: ypi:YpsIP31758_4168 phosphate ABC transporter%2C ATP-binding protein~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4234 YPK_4235 YPK_4235 YPK_4235 4674512 4675228 + phosphate uptake regulator%2C PhoU TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU family protein~KEGG: ypi:YpsIP31758_4167 phosphate transport system regulatory protein PhoU gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4235 YPK_4236 YPK_4236 YPK_4236 4675524 4676195 + protein of unknown function DUF583 PFAM: protein of unknown function DUF583~KEGG: yps:YPTB3958 hypothetical protein gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4236 YPK_4237 YPK_4237 YPK_4237 4676415 4677269 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~KEGG: yps:YPTB3957 ABC transporter%2C periplasmic amino acid binding protein gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4237 YPK_4238 YPK_4238 YPK_4238 4677440 4678177 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: yps:YPTB3956 ABC amino acid transporter%2C permease subunit gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4238 YPK_4239 YPK_4239 YPK_4239 4678179 4678934 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: yps:YPTB3955 ABC amino acid transporter%2C permease subunit gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4239 YPK_4240 YPK_4240 YPK_4240 4678969 4679637 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: yps:YPTB3954 putative haloacid dehalogenase-like hydrolase gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4240 YPK_4241 YPK_4241 YPK_4241 4680130 4681458 + Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease%3B sulphate transporter~KEGG: ypm:YP_4014 putative membrane/transport protein%2C symporter gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4241 YPK_4242 YPK_4242 YPK_4242 4682003 4682623 + conserved hypothetical protein KEGG: yps:YPTB3952 hypothetical protein gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4242 YPK_4243 YPK_4243 YPK_4243 4682685 4682966 + conserved hypothetical protein KEGG: ypn:YPN_3962 hypothetical protein gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4243 YPK_4244 YPK_4244 YPK_4244 4683431 4684630 - Trans-2-enoyl-CoA reductase (NAD(+)) PFAM: short-chain alcohol dehydrogenase~KEGG: ypk:y4119 hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4244 YPK_4245 YPK_4245 YPK_4245 4684837 4686201 - tRNA modification GTPase TrmE TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B Miro domain protein~KEGG: ypm:YP_4010 GTP-binding protein gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4245 YPK_4246 YPK_4246 YPK_4246 4686344 4687984 - 60 kDa inner membrane insertion protein PFAM: 60 kDa inner membrane insertion protein~KEGG: ypi:YpsIP31758_4157 inner membrane protein OxaA gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4246 YPK_4247 YPK_4247 YPK_4247 4687987 4688244 - protein of unknown function DUF37 PFAM: protein of unknown function DUF37~KEGG: yps:YPTB3947 hypothetical protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4247 YPK_4248 YPK_4248 YPK_4248 4688208 4688534 - ribonuclease P protein component TIGRFAM: ribonuclease P protein component~PFAM: ribonuclease P protein~KEGG: ypi:YpsIP31758_4155 ribonuclease P protein component gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4248 YPK_4249 YPK_4249 YPK_4249 4688586 4688726 - ribosomal protein L34 PFAM: ribosomal protein L34~KEGG: ent:Ent638_4152 ribosomal protein L34 gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4249 YPK_4250 YPK_4250 YPK_4250 4689109 4689249 - conserved hypothetical protein KEGG: yps:YPTB3944 hypothetical protein gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_4250 YPK_R0001 YPK_R0001 YPK_R0001 69449 69539 + tRNA-Sec tRNA-SeC(p)1 tRNA gene60 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0001 YPK_R0002 YPK_R0002 YPK_R0002 97781 97857 + tRNA-Pro tRNA-Pro1 tRNA gene84 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0002 YPK_R0003 YPK_R0003 YPK_R0003 345624 345700 + tRNA-Ile tRNA-Ile1 tRNA gene325 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0003 YPK_R0004 YPK_R0004 YPK_R0004 345752 345827 + tRNA-Ala tRNA-Ala1 tRNA gene326 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0004 YPK_R0005 YPK_R0005 YPK_R0005 353778 353853 + tRNA-Thr tRNA-Thr1 tRNA gene333 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0005 YPK_R0006 YPK_R0006 YPK_R0006 353872 353956 + tRNA-Tyr tRNA-Tyr1 tRNA gene334 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0006 YPK_R0007 YPK_R0007 YPK_R0007 354106 354180 + tRNA-Gly tRNA-Gly1 tRNA gene335 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0007 YPK_R0008 YPK_R0008 YPK_R0008 354187 354262 + tRNA-Thr tRNA-Thr2 tRNA gene336 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0008 YPK_R0009 YPK_R0009 YPK_R0009 385872 385947 + tRNA-Glu tRNA-Glu1 tRNA gene365 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0009 YPK_R0010 YPK_R0010 YPK_R0010 389351 389426 + tRNA-Thr tRNA-Thr3 tRNA gene367 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0010 YPK_R0011 YPK_R0011 YPK_R0011 1044665 1044738 + tRNA-Gly tRNA-Gly2 tRNA gene930 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0011 YPK_R0012 YPK_R0012 YPK_R0012 1237933 1238008 + tRNA-Glu tRNA-Glu2 tRNA gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0012 YPK_R0013 YPK_R0013 YPK_R0013 1241523 1241599 + tRNA-Asp tRNA-Asp1 tRNA gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0013 YPK_R0014 YPK_R0014 YPK_R0014 1248882 1248958 + tRNA-Asp tRNA-Asp2 tRNA gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0014 YPK_R0015 YPK_R0015 YPK_R0015 1587753 1587828 + tRNA-Val tRNA-Val1 tRNA gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0015 YPK_R0016 YPK_R0016 YPK_R0016 1587865 1587940 + tRNA-Val tRNA-Val2 tRNA gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0016 YPK_R0017 YPK_R0017 YPK_R0017 1587985 1588060 + tRNA-Val tRNA-Val3 tRNA gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0017 YPK_R0018 YPK_R0018 YPK_R0018 1588260 1588335 + tRNA-Lys tRNA-Lys1 tRNA gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0018 YPK_R0019 YPK_R0019 YPK_R0019 1657408 1657482 + tRNA-Arg tRNA-Arg1 tRNA gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0019 YPK_R0020 YPK_R0020 YPK_R0020 2312137 2312221 + tRNA-Tyr tRNA-Tyr2 tRNA gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0020 YPK_R0021 YPK_R0021 YPK_R0021 2312287 2312371 + tRNA-Tyr tRNA-Tyr3 tRNA gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0021 YPK_R0022 YPK_R0022 YPK_R0022 2403966 2404055 + tRNA-Ser tRNA-Ser1 tRNA gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0022 YPK_R0023 YPK_R0023 YPK_R0023 2411665 2411754 + tRNA-Ser tRNA-Ser2 tRNA gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0023 YPK_R0024 YPK_R0024 YPK_R0024 2530992 2531067 + tRNA-Asn tRNA-Asn1 tRNA gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0024 YPK_R0025 YPK_R0025 YPK_R0025 2722672 2722747 + tRNA-Asn tRNA-Asn2 tRNA gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0025 YPK_R0026 YPK_R0026 YPK_R0026 2733745 2733820 + tRNA-Asn tRNA-Asn3 tRNA gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0026 YPK_R0027 YPK_R0027 YPK_R0027 3090369 3090445 + tRNA-Pro tRNA-Pro2 tRNA gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0027 YPK_R0028 YPK_R0028 YPK_R0028 3302900 3302976 + tRNA-Met tRNA-Met1 tRNA gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0028 YPK_R0029 YPK_R0029 YPK_R0029 3302984 3303068 + tRNA-Leu tRNA-Leu1 tRNA gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0029 YPK_R0030 YPK_R0030 YPK_R0030 3303098 3303172 + tRNA-Gln tRNA-Gln1 tRNA gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0030 YPK_R0031 YPK_R0031 YPK_R0031 3303250 3303324 + tRNA-Gln tRNA-Gln2 tRNA gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0031 YPK_R0032 YPK_R0032 YPK_R0032 3303357 3303433 + tRNA-Met tRNA-Met2 tRNA gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0032 YPK_R0033 YPK_R0033 YPK_R0033 3303439 3303513 + tRNA-Gln tRNA-Gln3 tRNA gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0033 YPK_R0034 YPK_R0034 YPK_R0034 4013415 4013501 + tRNA-Leu tRNA-Leu2 tRNA gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0034 YPK_R0035 YPK_R0035 YPK_R0035 4013598 4013684 + tRNA-Leu tRNA-Leu3 tRNA gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0035 YPK_R0036 YPK_R0036 YPK_R0036 4013780 4013866 + tRNA-Leu tRNA-Leu4 tRNA gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0036 YPK_R0037 YPK_R0037 YPK_R0037 4225741 4225816 + tRNA-Phe tRNA-Phe1 tRNA gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0037 YPK_R0038 YPK_R0038 YPK_R0038 4641419 4641494 - tRNA-Glu tRNA-Glu3 tRNA gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0038 YPK_R0039 YPK_R0039 YPK_R0039 4493712 4493787 - tRNA-Glu tRNA-Glu4 tRNA gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0039 YPK_R0040 YPK_R0040 YPK_R0040 4490126 4490202 - tRNA-Asp tRNA-Asp3 tRNA gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0040 YPK_R0041 YPK_R0041 YPK_R0041 4490042 4490117 - tRNA-Trp tRNA-Trp1 tRNA gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0041 YPK_R0042 YPK_R0042 YPK_R0042 4433682 4433758 - tRNA-Arg tRNA-Arg2 tRNA gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0042 YPK_R0043 YPK_R0043 YPK_R0043 4433523 4433598 - tRNA-His tRNA-His1 tRNA gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0043 YPK_R0044 YPK_R0044 YPK_R0044 4433420 4433506 - tRNA-Leu tRNA-Leu5 tRNA gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0044 YPK_R0045 YPK_R0045 YPK_R0045 4433268 4433344 - tRNA-Pro tRNA-Pro3 tRNA gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0045 YPK_R0046 YPK_R0046 YPK_R0046 4331909 4331985 - tRNA-Ile tRNA-Ile2 tRNA gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0046 YPK_R0047 YPK_R0047 YPK_R0047 4331782 4331857 - tRNA-Ala tRNA-Ala2 tRNA gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0047 YPK_R0048 YPK_R0048 YPK_R0048 4195352 4195427 - tRNA-Gly tRNA-Gly3 tRNA gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0048 YPK_R0049 YPK_R0049 YPK_R0049 4195185 4195260 - tRNA-Gly tRNA-Gly4 tRNA gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0049 YPK_R0050 YPK_R0050 YPK_R0050 4195042 4195117 - tRNA-Gly tRNA-Gly5 tRNA gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0050 YPK_R0051 YPK_R0051 YPK_R0051 4125496 4125582 - tRNA-Leu tRNA-Leu6 tRNA gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0051 YPK_R0052 YPK_R0052 YPK_R0052 4125359 4125435 - tRNA-Met tRNA-Met3 tRNA gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0052 YPK_R0053 YPK_R0053 YPK_R0053 4061221 4061305 - tRNA-Leu tRNA-Leu7 tRNA gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0053 YPK_R0054 YPK_R0054 YPK_R0054 3698153 3698245 - tRNA-Ser tRNA-Ser3 tRNA gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0054 YPK_R0055 YPK_R0055 YPK_R0055 3698068 3698144 - tRNA-Arg tRNA-Arg3 tRNA gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0055 YPK_R0056 YPK_R0056 YPK_R0056 3697934 3698010 - tRNA-Arg tRNA-Arg4 tRNA gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0056 YPK_R0057 YPK_R0057 YPK_R0057 3697778 3697854 - tRNA-Arg tRNA-Arg5 tRNA gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0057 YPK_R0058 YPK_R0058 YPK_R0058 3697627 3697698 - tRNA-Arg tRNA-Arg6 tRNA gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0058 YPK_R0059 YPK_R0059 YPK_R0059 3671839 3671915 - tRNA-Ile tRNA-Ile3 tRNA gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0059 YPK_R0060 YPK_R0060 YPK_R0060 3671712 3671787 - tRNA-Ala tRNA-Ala3 tRNA gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0060 YPK_R0061 YPK_R0061 YPK_R0061 3445392 3445468 - tRNA-Arg tRNA-Arg7 tRNA gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0061 YPK_R0062 YPK_R0062 YPK_R0062 3252697 3252772 - tRNA-Lys tRNA-Lys2 tRNA gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0062 YPK_R0063 YPK_R0063 YPK_R0063 3252594 3252669 - tRNA-Lys tRNA-Lys3 tRNA gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0063 YPK_R0064 YPK_R0064 YPK_R0064 3252491 3252566 - tRNA-Lys tRNA-Lys4 tRNA gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0064 YPK_R0065 YPK_R0065 YPK_R0065 3252388 3252463 - tRNA-Lys tRNA-Lys5 tRNA gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0065 YPK_R0066 YPK_R0066 YPK_R0066 3252290 3252359 - tRNA-Lys tRNA-Lys6 tRNA gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0066 YPK_R0067 YPK_R0067 YPK_R0067 3252123 3252192 - tRNA-Lys tRNA-Lys7 tRNA gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0067 YPK_R0068 YPK_R0068 YPK_R0068 3123068 3123155 - tRNA-Ser tRNA-Ser4 tRNA gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0068 YPK_R0069 YPK_R0069 YPK_R0069 3122987 3123062 - tRNA-Thr tRNA-Thr4 tRNA gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0069 YPK_R0070 YPK_R0070 YPK_R0070 2874181 2874268 - tRNA-Ser tRNA-Ser5 tRNA gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0070 YPK_R0071 YPK_R0071 YPK_R0071 2593820 2593895 - tRNA-Lys tRNA-Lys8 tRNA gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0071 YPK_R0072 YPK_R0072 YPK_R0072 2587296 2587371 - tRNA-Gly tRNA-Gly6 tRNA gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0072 YPK_R0073 YPK_R0073 YPK_R0073 2587170 2587243 - tRNA-Cys tRNA-Cys1 tRNA gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0073 YPK_R0074 YPK_R0074 YPK_R0074 2587074 2587159 - tRNA-Leu tRNA-Leu8 tRNA gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0074 YPK_R0075 YPK_R0075 YPK_R0075 2062575 2062651 - tRNA-Val tRNA-Val4 tRNA gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0075 YPK_R0076 YPK_R0076 YPK_R0076 2062439 2062515 - tRNA-Val tRNA-Val5 tRNA gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0076 YPK_R0077 YPK_R0077 YPK_R0077 2062212 2062288 - tRNA-Val tRNA-Val6 tRNA gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0077 YPK_R0078 YPK_R0078 YPK_R0078 1585756 1585831 - tRNA-Ala tRNA-Ala4 tRNA gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0078 YPK_R0079 YPK_R0079 YPK_R0079 1585603 1585678 - tRNA-Ala tRNA-Ala5 tRNA gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0079 YPK_R0080 YPK_R0080 YPK_R0080 1184462 1184538 - tRNA-Met tRNA-Met4 tRNA gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0080 YPK_R0081 YPK_R0081 YPK_R0081 1184240 1184316 - tRNA-Met tRNA-Met5 tRNA gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0081 YPK_R0082 YPK_R0082 YPK_R0082 1184103 1184179 - tRNA-Met tRNA-Met6 tRNA gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0082 YPK_R0083 YPK_R0083 YPK_R0083 924099 924174 - tRNA-Phe tRNA-Phe2 tRNA gene815 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0083 YPK_R0084 YPK_R0084 YPK_R0084 690884 690960 - tRNA-Met tRNA-Met7 tRNA gene638 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0084 YPK_R0085 YPK_R0085 YPK_R0085 1236260 1237794 + 16S ribosomal RNA rRNA gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0085 YPK_R0086 YPK_R0086 YPK_R0086 343986 345520 + 16S ribosomal RNA rRNA gene324 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0086 YPK_R0087 YPK_R0087 YPK_R0087 384200 385734 + 16S ribosomal RNA rRNA gene364 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0087 YPK_R0088 YPK_R0088 YPK_R0088 4641632 4643166 - 16S ribosomal RNA rRNA gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0088 YPK_R0089 YPK_R0089 YPK_R0089 4493925 4495459 - 16S ribosomal RNA rRNA gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0089 YPK_R0090 YPK_R0090 YPK_R0090 4332089 4333623 - 16S ribosomal RNA rRNA gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0090 YPK_R0091 YPK_R0091 YPK_R0091 3672019 3673553 - 16S ribosomal RNA rRNA gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0091 YPK_R0092 YPK_R0092 YPK_R0092 1238261 1241167 + 23S ribosomal RNA rRNA gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0092 YPK_R0093 YPK_R0093 YPK_R0093 346046 348952 + 23S ribosomal RNA rRNA gene327 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0093 YPK_R0094 YPK_R0094 YPK_R0094 386199 389105 + 23S ribosomal RNA rRNA gene366 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0094 YPK_R0095 YPK_R0095 YPK_R0095 4638261 4641167 - 23S ribosomal RNA rRNA gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0095 YPK_R0096 YPK_R0096 YPK_R0096 4328657 4331563 - 23S ribosomal RNA rRNA gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0096 YPK_R0097 YPK_R0097 YPK_R0097 3668587 3671493 - 23S ribosomal RNA rRNA gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0097 YPK_R0098 YPK_R0098 YPK_R0098 4490554 4493460 - 23S ribosomal RNA rRNA gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=YPK_R0098