CH64_100 SM00382 ATPases associated with a variety of cellular activities CH64_1002 SM00382 ATPases associated with a variety of cellular activities CH64_1003 SM00981 CH64_1003 CH64_1012 SM00849 Metallo-beta-lactamase superfamily CH64_1024 SM00357 Cold shock protein domain CH64_1025 SM00357 Cold shock protein domain CH64_1026 SM01150 CH64_1026 CH64_1028 SM00382 ATPases associated with a variety of cellular activities CH64_1029 SM00849 Metallo-beta-lactamase superfamily CH64_1030 SM00411 bacterial (prokaryotic) histone like domain CH64_1031 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_1036 SM00870 CH64_1036 CH64_104 SM00855 Phosphoglycerate mutase family CH64_1043 SM00382 ATPases associated with a variety of cellular activities CH64_1045 SM00843 CH64_1045 CH64_1046 SM00344 helix_turn_helix ASNC type CH64_1048 SM00382 ATPases associated with a variety of cellular activities CH64_1049 SM00382 ATPases associated with a variety of cellular activities CH64_1051 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_1052 SM00382 ATPases associated with a variety of cellular activities CH64_1052 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_1054 SM00357 Cold shock protein domain CH64_1055 SM00382 ATPases associated with a variety of cellular activities CH64_1068 SM00382 ATPases associated with a variety of cellular activities CH64_1069 SM00062 Bacterial periplasmic substrate-binding proteins CH64_1069 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH64_1073 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1073 SM00895 CH64_1073 CH64_1074 SM00634 Bacterial Ig-like domain (group 1) CH64_1077 SM00062 Bacterial periplasmic substrate-binding proteins CH64_1077 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH64_108 SM00260 Two component signalling adaptor domain CH64_108 SM00448 cheY-homologous receiver domain CH64_1082 SM00382 ATPases associated with a variety of cellular activities CH64_1098 SM00014 Acid phosphatase homologues CH64_1099 SM01133 CH64_1099 CH64_1100 SM00420 helix_turn_helix, Deoxyribose operon repressor CH64_1100 SM01134 CH64_1100 CH64_1103 SM00936 Penicillin-binding protein 5, C-terminal domain CH64_1104 SM00116 Domain in cystathionine beta-synthase and other proteins. CH64_1107 SM00382 ATPases associated with a variety of cellular activities CH64_1107 SM00930 CH64_1107 CH64_1117 SM00518 AP endonuclease family 2 CH64_1124 SM00841 Elongation factor P, C-terminal CH64_1124 SM01185 CH64_1124 CH64_1127 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1127 SM00895 CH64_1127 CH64_1129 SM00833 Cobalamin synthesis protein cobW C-terminal domain CH64_1130 SM00014 Acid phosphatase homologues CH64_1132 SM00052 Putative diguanylate phosphodiesterase CH64_1136 SM00382 ATPases associated with a variety of cellular activities CH64_1140 SM00363 S4 RNA-binding domain CH64_1141 SM00487 DEAD-like helicases superfamily CH64_1141 SM00490 helicase superfamily c-terminal domain CH64_1160 SM00387 Histidine kinase-like ATPases CH64_1161 SM00421 helix_turn_helix, Lux Regulon CH64_1161 SM00448 cheY-homologous receiver domain CH64_1162 SM00387 Histidine kinase-like ATPases CH64_1162 SM00388 His Kinase A (phosphoacceptor) domain CH64_1162 SM00448 cheY-homologous receiver domain CH64_1163 SM00434 DNA Topoisomerase IV CH64_1169 SM00852 Probable molybdopterin binding domain CH64_1172 SM01060 CH64_1172 CH64_1174 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH64_1185 SM00354 helix_turn _helix lactose operon repressor CH64_1198 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_1198 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH64_1199 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH64_12 SM00382 ATPases associated with a variety of cellular activities CH64_1206 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_1214 SM00354 helix_turn _helix lactose operon repressor CH64_1220 SM00052 Putative diguanylate phosphodiesterase CH64_1222 SM00382 ATPases associated with a variety of cellular activities CH64_1225 SM00062 Bacterial periplasmic substrate-binding proteins CH64_1234 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH64_1236 SM00342 helix_turn_helix, arabinose operon control protein CH64_1239 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1247 SM00354 helix_turn _helix lactose operon repressor CH64_125 SM00487 DEAD-like helicases superfamily CH64_125 SM00490 helicase superfamily c-terminal domain CH64_1254 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_1254 SM00091 PAS domain CH64_1254 SM00267 diguanylate cyclase CH64_1255 SM00825 Beta-ketoacyl synthase CH64_126 SM00530 Helix-turn-helix XRE-family like proteins CH64_1263 SM00463 Small MutS-related domain CH64_1278 SM00382 ATPases associated with a variety of cellular activities CH64_1284 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH64_1287 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1287 SM00895 CH64_1287 CH64_1295 SM00421 helix_turn_helix, Lux Regulon CH64_1296 SM00354 helix_turn _helix lactose operon repressor CH64_1297 SM00867 YceI-like domain CH64_1301 SM00382 ATPases associated with a variety of cellular activities CH64_1310 SM00382 ATPases associated with a variety of cellular activities CH64_1312 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_1321 SM00387 Histidine kinase-like ATPases CH64_1322 SM00448 cheY-homologous receiver domain CH64_1322 SM00850 LytTr DNA-binding domain CH64_1355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH64_1355 SM00292 breast cancer carboxy-terminal domain CH64_1355 SM00532 Ligase N family CH64_1356 SM00771 ZipA, C-terminal domain (FtsZ-binding) CH64_1362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_1362 SM00387 Histidine kinase-like ATPases CH64_1362 SM00388 His Kinase A (phosphoacceptor) domain CH64_1363 SM00448 cheY-homologous receiver domain CH64_1363 SM00862 Transcriptional regulatory protein, C terminal CH64_1365 SM00382 ATPases associated with a variety of cellular activities CH64_1367 SM00382 ATPases associated with a variety of cellular activities CH64_1376 SM01130 CH64_1376 CH64_1383 SM00919 Malic enzyme, NAD binding domain CH64_1383 SM01274 CH64_1383 CH64_1390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_1394 SM00421 helix_turn_helix, Lux Regulon CH64_1394 SM00448 cheY-homologous receiver domain CH64_1408 SM01130 CH64_1408 CH64_1422 SM00382 ATPases associated with a variety of cellular activities CH64_1428 SM00924 MgtE intracellular N domain CH64_1429 SM00052 Putative diguanylate phosphodiesterase CH64_1429 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_1429 SM00091 PAS domain CH64_1429 SM00267 diguanylate cyclase CH64_143 SM00354 helix_turn _helix lactose operon repressor CH64_1436 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_1436 SM00387 Histidine kinase-like ATPases CH64_1436 SM00388 His Kinase A (phosphoacceptor) domain CH64_1437 SM00448 cheY-homologous receiver domain CH64_1437 SM00862 Transcriptional regulatory protein, C terminal CH64_1440 SM00046 Diacylglycerol kinase catalytic domain (presumed) CH64_1446 SM00420 helix_turn_helix, Deoxyribose operon repressor CH64_1446 SM01134 CH64_1446 CH64_1447 SM00116 Domain in cystathionine beta-synthase and other proteins. CH64_1454 SM00116 Domain in cystathionine beta-synthase and other proteins. CH64_1454 SM01240 CH64_1454 CH64_1459 SM00564 beta-propeller repeat CH64_1463 SM00530 Helix-turn-helix XRE-family like proteins CH64_1464 SM00028 Tetratricopeptide repeats CH64_1466 SM00562 CH64_1466 CH64_1468 SM01359 CH64_1468 CH64_1468 SM01360 CH64_1468 CH64_1471 SM00869 Autotransporter beta-domain CH64_1473 SM00869 Autotransporter beta-domain CH64_1479 SM00271 DnaJ molecular chaperone homology domain CH64_149 SM00062 Bacterial periplasmic substrate-binding proteins CH64_149 SM00387 Histidine kinase-like ATPases CH64_149 SM00388 His Kinase A (phosphoacceptor) domain CH64_149 SM00448 cheY-homologous receiver domain CH64_1493 SM00938 Nitrogen regulatory protein P-II CH64_1495 SM00382 ATPases associated with a variety of cellular activities CH64_1495 SM00448 cheY-homologous receiver domain CH64_1497 SM00387 Histidine kinase-like ATPases CH64_1497 SM00388 His Kinase A (phosphoacceptor) domain CH64_1499 SM01211 CH64_1499 CH64_15 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH64_15 SM00382 ATPases associated with a variety of cellular activities CH64_150 SM00421 helix_turn_helix, Lux Regulon CH64_150 SM00448 cheY-homologous receiver domain CH64_1500 SM00062 Bacterial periplasmic substrate-binding proteins CH64_1511 SM00358 Double-stranded RNA binding motif CH64_1511 SM00535 Ribonuclease III family CH64_1521 SM00487 DEAD-like helicases superfamily CH64_1521 SM00490 helicase superfamily c-terminal domain CH64_1522 SM00248 ankyrin repeats CH64_1524 SM00986 Uracil DNA glycosylase superfamily CH64_1524 SM00987 UreE urease accessory protein, C-terminal domain CH64_1565 SM00342 helix_turn_helix, arabinose operon control protein CH64_157 SM00382 ATPases associated with a variety of cellular activities CH64_1581 SM00988 UreE urease accessory protein, N-terminal domain CH64_1586 SM00382 ATPases associated with a variety of cellular activities CH64_1587 SM00382 ATPases associated with a variety of cellular activities CH64_1592 SM00342 helix_turn_helix, arabinose operon control protein CH64_1593 SM00357 Cold shock protein domain CH64_16 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_1600 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1606 SM00382 ATPases associated with a variety of cellular activities CH64_161 SM00387 Histidine kinase-like ATPases CH64_1610 SM00479 CH64_1610 CH64_1613 SM00849 Metallo-beta-lactamase superfamily CH64_1614 SM00257 Lysin motif CH64_1619 SM00825 Beta-ketoacyl synthase CH64_162 SM00421 helix_turn_helix, Lux Regulon CH64_162 SM00448 cheY-homologous receiver domain CH64_1620 SM00822 CH64_1620 CH64_1622 SM00825 Beta-ketoacyl synthase CH64_163 SM00448 cheY-homologous receiver domain CH64_1633 SM00563 Phosphate acyltransferases CH64_164 SM00091 PAS domain CH64_164 SM00387 Histidine kinase-like ATPases CH64_1643 SM00382 ATPases associated with a variety of cellular activities CH64_1643 SM00930 CH64_1643 CH64_165 SM00764 Citrate lyase ligase C-terminal domain CH64_1651 SM01322 CH64_1651 CH64_1655 SM00977 TilS substrate C-terminal domain CH64_1658 SM00481 DNA polymerase alpha chain like domain CH64_1664 SM00935 Outer membrane protein (OmpH-like) CH64_1666 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH64_1675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_1684 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH64_1684 SM00475 5'-3' exonuclease CH64_1692 SM00925 MltA specific insert domain CH64_1696 SM00646 CH64_1696 CH64_1708 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH64_1710 SM00927 DNA mismatch repair enzyme MutH CH64_1714 SM00563 Phosphate acyltransferases CH64_1716 SM00354 helix_turn _helix lactose operon repressor CH64_1721 SM00849 Metallo-beta-lactamase superfamily CH64_1724 SM00862 Transcriptional regulatory protein, C terminal CH64_1734 SM00382 ATPases associated with a variety of cellular activities CH64_1738 SM00947 Carbonic anhydrase CH64_1740 SM00271 DnaJ molecular chaperone homology domain CH64_1741 SM00354 helix_turn _helix lactose operon repressor CH64_1745 SM00344 helix_turn_helix ASNC type CH64_1746 SM00091 PAS domain CH64_1746 SM00267 diguanylate cyclase CH64_1754 SM00448 cheY-homologous receiver domain CH64_1757 SM00869 Autotransporter beta-domain CH64_1769 SM00937 CH64_1769 CH64_177 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_1778 SM00634 Bacterial Ig-like domain (group 1) CH64_1784 SM00822 CH64_1784 CH64_1790 SM01011 Aminopeptidase P, N-terminal domain CH64_1800 SM00194 Protein tyrosine phosphatase, catalytic domain CH64_1800 SM00404 Protein tyrosine phosphatase, catalytic domain motif CH64_1803 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH64_1804 SM00861 Transketolase, pyrimidine binding domain CH64_1811 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH64_1812 SM00731 SprT homologues. CH64_1818 SM00732 Likely ribonuclease with RNase H fold. CH64_1825 SM01152 CH64_1825 CH64_1827 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_1832 SM00478 endonuclease III CH64_1832 SM00525 CH64_1832 CH64_1840 SM00869 Autotransporter beta-domain CH64_186 SM00344 helix_turn_helix ASNC type CH64_1862 SM00912 haemagglutination activity domain CH64_1875 SM00346 helix_turn_helix isocitrate lyase regulation CH64_188 SM00829 Enoylreductase CH64_189 SM01038 Beta galactosidase small chain CH64_190 SM00354 helix_turn _helix lactose operon repressor CH64_1900 SM00382 ATPases associated with a variety of cellular activities CH64_1900 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_191 SM00357 Cold shock protein domain CH64_1910 SM00448 cheY-homologous receiver domain CH64_1910 SM00862 Transcriptional regulatory protein, C terminal CH64_1911 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_1911 SM00387 Histidine kinase-like ATPases CH64_1911 SM00388 His Kinase A (phosphoacceptor) domain CH64_1913 SM00354 helix_turn _helix lactose operon repressor CH64_1924 SM00382 ATPases associated with a variety of cellular activities CH64_193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_1930 SM00354 helix_turn _helix lactose operon repressor CH64_1933 SM00869 Autotransporter beta-domain CH64_1938 SM00052 Putative diguanylate phosphodiesterase CH64_1938 SM00091 PAS domain CH64_1938 SM00267 diguanylate cyclase CH64_195 SM00831 Cation transporter/ATPase, N-terminus CH64_196 SM00829 Enoylreductase CH64_1965 SM00862 Transcriptional regulatory protein, C terminal CH64_1979 SM00858 CH64_1979 CH64_1983 SM00382 ATPases associated with a variety of cellular activities CH64_1988 SM00382 ATPases associated with a variety of cellular activities CH64_1997 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_2001 SM00382 ATPases associated with a variety of cellular activities CH64_2026 SM00342 helix_turn_helix, arabinose operon control protein CH64_2029 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_203 SM00073 Histidine Phosphotransfer domain CH64_203 SM00260 Two component signalling adaptor domain CH64_203 SM00387 Histidine kinase-like ATPases CH64_203 SM01231 CH64_203 CH64_2031 SM00563 Phosphate acyltransferases CH64_2032 SM00434 DNA Topoisomerase IV CH64_2036 SM00387 Histidine kinase-like ATPases CH64_2036 SM00433 TopoisomeraseII CH64_204 SM00260 Two component signalling adaptor domain CH64_205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_205 SM00319 Homologues of the ligand binding domain of Tar CH64_2051 SM01118 CH64_2051 CH64_2052 SM00287 Bacterial SH3 domain homologues CH64_2053 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_2055 SM00905 Dihydroneopterin aldolase CH64_2056 SM01207 CH64_2056 CH64_2059 SM00400 zinc finger CH64_2059 SM00493 CH64_2059 CH64_2059 SM00766 DNA primase DnaG DnaB-binding CH64_206 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_206 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_206 SM00319 Homologues of the ligand binding domain of Tar CH64_207 SM00138 Methyltransferase, chemotaxis proteins CH64_2072 SM00479 CH64_2072 CH64_208 SM00448 cheY-homologous receiver domain CH64_2081 SM00487 DEAD-like helicases superfamily CH64_2081 SM00490 helicase superfamily c-terminal domain CH64_209 SM00448 cheY-homologous receiver domain CH64_2091 SM00481 DNA polymerase alpha chain like domain CH64_2106 SM01060 CH64_2106 CH64_2129 SM00869 Autotransporter beta-domain CH64_2135 SM00858 CH64_2135 CH64_2139 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_2139 SM00895 CH64_2139 CH64_2151 SM00829 Enoylreductase CH64_2155 SM00347 helix_turn_helix multiple antibiotic resistance protein CH64_2157 SM00382 ATPases associated with a variety of cellular activities CH64_2160 SM00869 Autotransporter beta-domain CH64_2165 SM00749 bacterial OsmY and nodulation domain CH64_2168 SM00073 Histidine Phosphotransfer domain CH64_2168 SM00091 PAS domain CH64_2168 SM00387 Histidine kinase-like ATPases CH64_2168 SM00388 His Kinase A (phosphoacceptor) domain CH64_2168 SM00448 cheY-homologous receiver domain CH64_2169 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_217 SM00858 CH64_217 CH64_2179 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH64_2180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH64_2187 SM00382 ATPases associated with a variety of cellular activities CH64_2193 SM00382 ATPases associated with a variety of cellular activities CH64_2203 SM00642 Alpha-amylase domain CH64_2205 SM00354 helix_turn _helix lactose operon repressor CH64_2206 SM00831 Cation transporter/ATPase, N-terminus CH64_2230 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_2235 SM00052 Putative diguanylate phosphodiesterase CH64_2235 SM00267 diguanylate cyclase CH64_2236 SM00829 Enoylreductase CH64_2241 SM00878 Biotin carboxylase C-terminal domain CH64_2247 SM00267 diguanylate cyclase CH64_2249 SM00357 Cold shock protein domain CH64_2250 SM00357 Cold shock protein domain CH64_2251 SM00357 Cold shock protein domain CH64_2255 SM00062 Bacterial periplasmic substrate-binding proteins CH64_2258 SM00382 ATPases associated with a variety of cellular activities CH64_226 SM00047 Lysozyme subfamily 2 CH64_2267 SM01005 Alanine racemase, C-terminal domain CH64_2268 SM00382 ATPases associated with a variety of cellular activities CH64_2269 SM00829 Enoylreductase CH64_2277 SM00563 Phosphate acyltransferases CH64_2283 SM00382 ATPases associated with a variety of cellular activities CH64_2291 SM01018 B12 binding domain CH64_2292 SM00346 helix_turn_helix isocitrate lyase regulation CH64_2316 SM00422 helix_turn_helix, mercury resistance CH64_2319 SM00662 RNA polymerases D CH64_2320 SM00363 S4 RNA-binding domain CH64_2320 SM01390 CH64_2320 CH64_2333 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH64_2334 SM01374 CH64_2334 CH64_2338 SM00322 K homology RNA-binding domain CH64_2341 SM01382 CH64_2341 CH64_2341 SM01383 CH64_2341 CH64_2345 SM01403 CH64_2345 CH64_2349 SM00838 Elongation factor G C-terminus CH64_2349 SM00889 Elongation factor G, domain IV CH64_2362 SM00382 ATPases associated with a variety of cellular activities CH64_2371 SM00100 Cyclic nucleotide-monophosphate binding domain CH64_2371 SM00419 helix_turn_helix, cAMP Regulatory protein CH64_2378 SM00354 helix_turn _helix lactose operon repressor CH64_238 SM00382 ATPases associated with a variety of cellular activities CH64_2402 SM00363 S4 RNA-binding domain CH64_2405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_2405 SM00387 Histidine kinase-like ATPases CH64_2405 SM00388 His Kinase A (phosphoacceptor) domain CH64_2406 SM00448 cheY-homologous receiver domain CH64_2406 SM00862 Transcriptional regulatory protein, C terminal CH64_2408 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_2408 SM00732 Likely ribonuclease with RNase H fold. CH64_2409 SM00899 CH64_2409 CH64_2417 SM00421 helix_turn_helix, Lux Regulon CH64_2419 SM00450 Rhodanese Homology Domain CH64_2421 SM00420 helix_turn_helix, Deoxyribose operon repressor CH64_2421 SM01134 CH64_2421 CH64_2426 SM00642 Alpha-amylase domain CH64_2427 SM00642 Alpha-amylase domain CH64_2431 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH64_2435 SM00354 helix_turn _helix lactose operon repressor CH64_244 SM00478 endonuclease III CH64_245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH64_245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_2457 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH64_2458 SM00235 Zinc-dependent metalloprotease CH64_246 SM00342 helix_turn_helix, arabinose operon control protein CH64_2461 SM01022 CH64_2461 CH64_2467 SM00052 Putative diguanylate phosphodiesterase CH64_2474 SM00052 Putative diguanylate phosphodiesterase CH64_2474 SM00267 diguanylate cyclase CH64_2475 SM00382 ATPases associated with a variety of cellular activities CH64_2476 SM00382 ATPases associated with a variety of cellular activities CH64_2481 SM00912 haemagglutination activity domain CH64_2483 SM00912 haemagglutination activity domain CH64_2486 SM00387 Histidine kinase-like ATPases CH64_2487 SM00421 helix_turn_helix, Lux Regulon CH64_2487 SM00448 cheY-homologous receiver domain CH64_2490 SM00347 helix_turn_helix multiple antibiotic resistance protein CH64_2497 SM00342 helix_turn_helix, arabinose operon control protein CH64_2499 SM00382 ATPases associated with a variety of cellular activities CH64_2505 SM00342 helix_turn_helix, arabinose operon control protein CH64_2510 SM00984 UDP binding domain CH64_2515 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_2519 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_2519 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_2519 SM01358 CH64_2519 CH64_2522 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_2536 SM00642 Alpha-amylase domain CH64_2547 SM00387 Histidine kinase-like ATPases CH64_2547 SM00433 TopoisomeraseII CH64_2549 SM00480 DNA polymerase III beta subunit CH64_2550 SM00382 ATPases associated with a variety of cellular activities CH64_2550 SM00760 Bacterial dnaA protein helix-turn-helix domain CH64_2553 SM01234 CH64_2553 CH64_2558 SM00382 ATPases associated with a variety of cellular activities CH64_2558 SM00930 CH64_2558 CH64_2560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_2560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_2562 SM00387 Histidine kinase-like ATPases CH64_2562 SM00388 His Kinase A (phosphoacceptor) domain CH64_2563 SM00421 helix_turn_helix, Lux Regulon CH64_2563 SM00448 cheY-homologous receiver domain CH64_2569 SM00062 Bacterial periplasmic substrate-binding proteins CH64_257 SM00062 Bacterial periplasmic substrate-binding proteins CH64_257 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH64_2575 SM00382 ATPases associated with a variety of cellular activities CH64_2583 SM00382 ATPases associated with a variety of cellular activities CH64_259 SM00382 ATPases associated with a variety of cellular activities CH64_2592 SM01228 CH64_2592 CH64_2594 SM00344 helix_turn_helix ASNC type CH64_2597 SM00327 von Willebrand factor (vWF) type A domain CH64_2598 SM00382 ATPases associated with a variety of cellular activities CH64_2601 SM00382 ATPases associated with a variety of cellular activities CH64_2606 SM00354 helix_turn _helix lactose operon repressor CH64_2607 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_2607 SM00895 CH64_2607 CH64_2617 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH64_2617 SM00474 3'-5' exonuclease CH64_2617 SM00475 5'-3' exonuclease CH64_2617 SM00482 DNA polymerase A domain CH64_2620 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_2621 SM00382 ATPases associated with a variety of cellular activities CH64_2621 SM00448 cheY-homologous receiver domain CH64_2622 SM00091 PAS domain CH64_2622 SM00387 Histidine kinase-like ATPases CH64_2622 SM00388 His Kinase A (phosphoacceptor) domain CH64_2623 SM01230 CH64_2623 CH64_2630 SM00421 helix_turn_helix, Lux Regulon CH64_2631 SM00421 helix_turn_helix, Lux Regulon CH64_2635 SM00487 DEAD-like helicases superfamily CH64_2635 SM00490 helicase superfamily c-terminal domain CH64_2637 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_2637 SM00954 Region found in RelA / SpoT proteins CH64_2638 SM01409 CH64_2638 CH64_2639 SM00072 Guanylate kinase homologues. CH64_2640 SM00532 Ligase N family CH64_2643 SM00052 Putative diguanylate phosphodiesterase CH64_2643 SM00091 PAS domain CH64_2643 SM00267 diguanylate cyclase CH64_2653 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CH64_2653 SM01232 CH64_2653 CH64_2661 SM00829 Enoylreductase CH64_2665 SM00450 Rhodanese Homology Domain CH64_2669 SM00971 Serine acetyltransferase, N-terminal CH64_2671 SM00342 helix_turn_helix, arabinose operon control protein CH64_2672 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_2672 SM00387 Histidine kinase-like ATPases CH64_2672 SM00388 His Kinase A (phosphoacceptor) domain CH64_2673 SM00448 cheY-homologous receiver domain CH64_2673 SM00862 Transcriptional regulatory protein, C terminal CH64_2692 SM00382 ATPases associated with a variety of cellular activities CH64_2692 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_2695 SM00354 helix_turn _helix lactose operon repressor CH64_2696 SM00487 DEAD-like helicases superfamily CH64_2696 SM00490 helicase superfamily c-terminal domain CH64_2707 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH64_271 SM00363 S4 RNA-binding domain CH64_2713 SM00382 ATPases associated with a variety of cellular activities CH64_2733 SM00382 ATPases associated with a variety of cellular activities CH64_2738 SM00382 ATPases associated with a variety of cellular activities CH64_274 SM00642 Alpha-amylase domain CH64_275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_2753 SM00060 Fibronectin type 3 domain CH64_2755 SM00487 DEAD-like helicases superfamily CH64_2755 SM00490 helicase superfamily c-terminal domain CH64_2757 SM00357 Cold shock protein domain CH64_2757 SM00382 ATPases associated with a variety of cellular activities CH64_2757 SM00959 Rho termination factor, N-terminal domain CH64_2761 SM00984 UDP binding domain CH64_2781 SM01219 CH64_2781 CH64_2796 SM00341 Helicase and RNase D C-terminal CH64_2796 SM00487 DEAD-like helicases superfamily CH64_2796 SM00490 helicase superfamily c-terminal domain CH64_2796 SM00956 CH64_2796 CH64_280 SM00421 helix_turn_helix, Lux Regulon CH64_280 SM00448 cheY-homologous receiver domain CH64_281 SM00465 GIY-YIG type nucleases (URI domain) CH64_2815 SM00382 ATPases associated with a variety of cellular activities CH64_2815 SM00962 SRP54-type protein, GTPase domain CH64_2815 SM00963 SRP54-type protein, helical bundle domain CH64_2816 SM00382 ATPases associated with a variety of cellular activities CH64_2824 SM00382 ATPases associated with a variety of cellular activities CH64_2825 SM00382 ATPases associated with a variety of cellular activities CH64_2835 SM00382 ATPases associated with a variety of cellular activities CH64_2854 SM01004 Delta-aminolevulinic acid dehydratase CH64_2855 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH64_2879 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH64_2879 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH64_2880 SM00649 Ribosomal protein L11/L12 CH64_2885 SM00663 RNA polymerase I subunit A N-terminus CH64_2886 SM00876 Biotin and Thiamin Synthesis associated domain CH64_289 SM00869 Autotransporter beta-domain CH64_2897 SM00411 bacterial (prokaryotic) histone like domain CH64_2899 SM01209 CH64_2899 CH64_2899 SM01210 CH64_2899 CH64_2900 SM00798 AICARFT/IMPCHase bienzyme CH64_2900 SM00851 MGS-like domain CH64_2910 SM00421 helix_turn_helix, Lux Regulon CH64_2910 SM00448 cheY-homologous receiver domain CH64_2911 SM00387 Histidine kinase-like ATPases CH64_2911 SM00388 His Kinase A (phosphoacceptor) domain CH64_2911 SM00448 cheY-homologous receiver domain CH64_2918 SM00028 Tetratricopeptide repeats CH64_2924 SM00342 helix_turn_helix, arabinose operon control protein CH64_2934 SM00382 ATPases associated with a variety of cellular activities CH64_2948 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_2949 SM00382 ATPases associated with a variety of cellular activities CH64_2957 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_2959 SM00919 Malic enzyme, NAD binding domain CH64_2959 SM01274 CH64_2959 CH64_296 SM00822 CH64_296 CH64_296 SM00823 Phosphopantetheine attachment site CH64_296 SM00826 CH64_296 CH64_296 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH64_296 SM00829 Enoylreductase CH64_297 SM00825 Beta-ketoacyl synthase CH64_2970 SM00849 Metallo-beta-lactamase superfamily CH64_2980 SM00883 Chaperonin 10 Kd subunit CH64_2984 SM00841 Elongation factor P, C-terminal CH64_2984 SM01185 CH64_2984 CH64_299 SM00421 helix_turn_helix, Lux Regulon CH64_299 SM00448 cheY-homologous receiver domain CH64_2996 SM00479 CH64_2996 CH64_3003 SM00257 Lysin motif CH64_3003 SM00646 CH64_3003 CH64_3004 SM00853 MutL C terminal dimerisation domain CH64_3004 SM01340 CH64_3004 CH64_3008 SM00244 prohibitin homologues CH64_3009 SM00244 prohibitin homologues CH64_301 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_3011 SM00788 Adenylosuccinate synthetase CH64_3013 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_3013 SM00357 Cold shock protein domain CH64_3013 SM00955 CH64_3013 CH64_3014 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH64_3030 SM01091 Transporter associated domain CH64_3036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_3036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_3050 SM00387 Histidine kinase-like ATPases CH64_3050 SM00388 His Kinase A (phosphoacceptor) domain CH64_3051 SM00448 cheY-homologous receiver domain CH64_3051 SM00862 Transcriptional regulatory protein, C terminal CH64_3054 SM01103 CH64_3054 CH64_3056 SM00382 ATPases associated with a variety of cellular activities CH64_3063 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_3063 SM00322 K homology RNA-binding domain CH64_3064 SM00173 Ras subfamily of RAS small GTPases CH64_3067 SM01387 CH64_3067 CH64_3068 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_3068 SM00322 K homology RNA-binding domain CH64_3069 SM00028 Tetratricopeptide repeats CH64_307 SM00448 cheY-homologous receiver domain CH64_3070 SM00487 DEAD-like helicases superfamily CH64_3070 SM00490 helicase superfamily c-terminal domain CH64_308 SM00387 Histidine kinase-like ATPases CH64_3085 SM00382 ATPases associated with a variety of cellular activities CH64_3088 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH64_3091 SM00382 ATPases associated with a variety of cellular activities CH64_3092 SM00382 ATPases associated with a variety of cellular activities CH64_3117 SM00421 helix_turn_helix, Lux Regulon CH64_3127 SM00382 ATPases associated with a variety of cellular activities CH64_3127 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_3145 SM00421 helix_turn_helix, Lux Regulon CH64_3147 SM00421 helix_turn_helix, Lux Regulon CH64_3147 SM00448 cheY-homologous receiver domain CH64_3148 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3148 SM00387 Histidine kinase-like ATPases CH64_3148 SM00388 His Kinase A (phosphoacceptor) domain CH64_3148 SM00448 cheY-homologous receiver domain CH64_3149 SM00257 Lysin motif CH64_3149 SM00634 Bacterial Ig-like domain (group 1) CH64_3150 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH64_3152 SM00421 helix_turn_helix, Lux Regulon CH64_3157 SM01133 CH64_3157 CH64_3161 SM00382 ATPases associated with a variety of cellular activities CH64_317 SM00382 ATPases associated with a variety of cellular activities CH64_3172 SM01120 CH64_3172 CH64_3174 SM00091 PAS domain CH64_3175 SM00354 helix_turn _helix lactose operon repressor CH64_3176 SM00640 Glycosyl hydrolases family 32 CH64_3180 SM00267 diguanylate cyclase CH64_3192 SM00749 bacterial OsmY and nodulation domain CH64_3198 SM01133 CH64_3198 CH64_3199 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CH64_32 SM00919 Malic enzyme, NAD binding domain CH64_32 SM01274 CH64_32 CH64_3204 SM00382 ATPases associated with a variety of cellular activities CH64_3205 SM00530 Helix-turn-helix XRE-family like proteins CH64_3206 SM00829 Enoylreductase CH64_3208 SM00382 ATPases associated with a variety of cellular activities CH64_3212 SM00267 diguanylate cyclase CH64_3214 SM00831 Cation transporter/ATPase, N-terminus CH64_3218 SM00342 helix_turn_helix, arabinose operon control protein CH64_3218 SM00871 Bacterial transcription activator, effector binding domain CH64_3219 SM00855 Phosphoglycerate mutase family CH64_3221 SM00448 cheY-homologous receiver domain CH64_3221 SM00862 Transcriptional regulatory protein, C terminal CH64_3227 SM00852 Probable molybdopterin binding domain CH64_3232 SM00271 DnaJ molecular chaperone homology domain CH64_3236 SM00904 Riboflavin kinase CH64_3242 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CH64_3243 SM00851 MGS-like domain CH64_3243 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH64_3250 SM00650 Ribosomal RNA adenine dimethylases CH64_3254 SM00271 DnaJ molecular chaperone homology domain CH64_3257 SM00487 DEAD-like helicases superfamily CH64_3257 SM00490 helicase superfamily c-terminal domain CH64_3258 SM00486 DNA polymerase type-B family CH64_3260 SM00382 ATPases associated with a variety of cellular activities CH64_3272 SM01329 CH64_3272 CH64_3273 SM00917 LeuA allosteric (dimerisation) domain CH64_3278 SM00354 helix_turn _helix lactose operon repressor CH64_3293 SM00842 Cell division protein FtsA CH64_3294 SM00864 Tubulin/FtsZ family, GTPase domain CH64_3294 SM00865 Tubulin/FtsZ family, C-terminal domain CH64_3298 SM00957 SecA DEAD-like domain CH64_3298 SM00958 SecA preprotein cross-linking domain CH64_3303 SM01240 CH64_3303 CH64_3305 SM00869 Autotransporter beta-domain CH64_3310 SM00644 CH64_3310 CH64_3313 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_3313 SM00895 CH64_3313 CH64_3318 SM00342 helix_turn_helix, arabinose operon control protein CH64_3323 SM00912 haemagglutination activity domain CH64_333 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_333 SM00387 Histidine kinase-like ATPases CH64_3335 SM00947 Carbonic anhydrase CH64_3336 SM00382 ATPases associated with a variety of cellular activities CH64_3347 SM00382 ATPases associated with a variety of cellular activities CH64_3357 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH64_3358 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH64_3359 SM00073 Histidine Phosphotransfer domain CH64_3359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_3359 SM00387 Histidine kinase-like ATPases CH64_3359 SM00388 His Kinase A (phosphoacceptor) domain CH64_3359 SM00448 cheY-homologous receiver domain CH64_3361 SM00954 Region found in RelA / SpoT proteins CH64_3364 SM01192 CH64_3364 CH64_3364 SM01193 CH64_3364 CH64_337 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_3379 SM00382 ATPases associated with a variety of cellular activities CH64_3381 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3381 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH64_3388 SM00257 Lysin motif CH64_3390 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CH64_3390 SM00534 ATPase domain of DNA mismatch repair MUTS family CH64_3403 SM00382 ATPases associated with a variety of cellular activities CH64_3405 SM00382 ATPases associated with a variety of cellular activities CH64_3407 SM00825 Beta-ketoacyl synthase CH64_3410 SM00822 CH64_3410 CH64_3411 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3412 SM00869 Autotransporter beta-domain CH64_3416 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3419 SM00382 ATPases associated with a variety of cellular activities CH64_3422 SM00530 Helix-turn-helix XRE-family like proteins CH64_3424 SM00838 Elongation factor G C-terminus CH64_3424 SM00889 Elongation factor G, domain IV CH64_3425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH64_3428 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_3434 SM00382 ATPases associated with a variety of cellular activities CH64_3437 SM00861 Transketolase, pyrimidine binding domain CH64_3443 SM00382 ATPases associated with a variety of cellular activities CH64_3445 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH64_3455 SM01091 Transporter associated domain CH64_3457 SM00382 ATPases associated with a variety of cellular activities CH64_3457 SM00962 SRP54-type protein, GTPase domain CH64_3457 SM00963 SRP54-type protein, helical bundle domain CH64_346 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_346 SM00866 CH64_346 CH64_3464 SM00448 cheY-homologous receiver domain CH64_3464 SM00850 LytTr DNA-binding domain CH64_3466 SM00830 Chorismate mutase type II CH64_3467 SM00830 Chorismate mutase type II CH64_3470 SM00363 S4 RNA-binding domain CH64_3472 SM00382 ATPases associated with a variety of cellular activities CH64_3472 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_3479 SM00155 Phospholipase D. Active site motifs. CH64_3480 SM00881 CoA binding domain CH64_3481 SM01144 CH64_3481 CH64_3483 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH64_3486 SM00347 helix_turn_helix multiple antibiotic resistance protein CH64_3495 SM01007 Class II Aldolase and Adducin N-terminal domain CH64_3501 SM00710 Parallel beta-helix repeats CH64_3501 SM00912 haemagglutination activity domain CH64_3509 SM00900 CH64_3509 CH64_351 SM00382 ATPases associated with a variety of cellular activities CH64_3522 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH64_3536 SM00448 cheY-homologous receiver domain CH64_3536 SM00862 Transcriptional regulatory protein, C terminal CH64_3537 SM00091 PAS domain CH64_3537 SM00387 Histidine kinase-like ATPases CH64_3537 SM00388 His Kinase A (phosphoacceptor) domain CH64_3541 SM00642 Alpha-amylase domain CH64_3549 SM01323 CH64_3549 CH64_355 SM00257 Lysin motif CH64_3559 SM00861 Transketolase, pyrimidine binding domain CH64_3562 SM00981 CH64_3562 CH64_3579 SM00382 ATPases associated with a variety of cellular activities CH64_3579 SM00994 ClpX C4-type zinc finger CH64_3579 SM01086 C-terminal, D2-small domain, of ClpB protein CH64_358 SM00420 helix_turn_helix, Deoxyribose operon repressor CH64_358 SM01134 CH64_358 CH64_3580 SM00382 ATPases associated with a variety of cellular activities CH64_3580 SM00464 Found in ATP-dependent protease La (LON) CH64_3581 SM00411 bacterial (prokaryotic) histone like domain CH64_3589 SM00344 helix_turn_helix ASNC type CH64_3590 SM00382 ATPases associated with a variety of cellular activities CH64_3591 SM00382 ATPases associated with a variety of cellular activities CH64_3592 SM00938 Nitrogen regulatory protein P-II CH64_360 SM00421 helix_turn_helix, Lux Regulon CH64_360 SM00448 cheY-homologous receiver domain CH64_3600 SM00382 ATPases associated with a variety of cellular activities CH64_3614 SM00382 ATPases associated with a variety of cellular activities CH64_3616 SM00493 CH64_3616 CH64_3617 SM00387 Histidine kinase-like ATPases CH64_3635 SM00422 helix_turn_helix, mercury resistance CH64_3637 SM00244 prohibitin homologues CH64_3639 SM00822 CH64_3639 CH64_3641 SM00382 ATPases associated with a variety of cellular activities CH64_3644 SM01001 AIR carboxylase CH64_3647 SM00840 CH64_3647 CH64_3654 SM00487 DEAD-like helicases superfamily CH64_3654 SM00490 helicase superfamily c-terminal domain CH64_368 SM01400 CH64_368 CH64_3695 SM00912 haemagglutination activity domain CH64_3697 SM00869 Autotransporter beta-domain CH64_3699 SM00382 ATPases associated with a variety of cellular activities CH64_3705 SM00421 helix_turn_helix, Lux Regulon CH64_3707 SM00357 Cold shock protein domain CH64_3709 SM00267 diguanylate cyclase CH64_3711 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_3714 SM00936 Penicillin-binding protein 5, C-terminal domain CH64_372 SM00937 CH64_372 CH64_3725 SM00382 ATPases associated with a variety of cellular activities CH64_3728 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3731 SM00116 Domain in cystathionine beta-synthase and other proteins. CH64_3731 SM01091 Transporter associated domain CH64_3734 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_3752 SM01081 Putative carbohydrate binding domain CH64_3756 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_3764 SM00448 cheY-homologous receiver domain CH64_3764 SM00862 Transcriptional regulatory protein, C terminal CH64_3766 SM00387 Histidine kinase-like ATPases CH64_3766 SM00388 His Kinase A (phosphoacceptor) domain CH64_3775 SM00796 Allophanate hydrolase subunit 1 CH64_3776 SM00797 Allophanate hydrolase subunit 2 CH64_378 SM00267 diguanylate cyclase CH64_3786 SM00861 Transketolase, pyrimidine binding domain CH64_3789 SM00881 CoA binding domain CH64_3810 SM00855 Phosphoglycerate mutase family CH64_3817 SM00382 ATPases associated with a variety of cellular activities CH64_3822 SM00382 ATPases associated with a variety of cellular activities CH64_3826 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_3826 SM00876 Biotin and Thiamin Synthesis associated domain CH64_383 SM00481 DNA polymerase alpha chain like domain CH64_3830 SM00382 ATPases associated with a variety of cellular activities CH64_3831 SM00487 DEAD-like helicases superfamily CH64_3831 SM00490 helicase superfamily c-terminal domain CH64_3834 SM00729 Elongator protein 3, MiaB family, Radical SAM CH64_3841 SM00382 ATPases associated with a variety of cellular activities CH64_3844 SM00487 DEAD-like helicases superfamily CH64_3844 SM00490 helicase superfamily c-terminal domain CH64_3846 SM00116 Domain in cystathionine beta-synthase and other proteins. CH64_3850 SM01118 CH64_3850 CH64_3851 SM00507 HNH nucleases CH64_3859 SM00382 ATPases associated with a variety of cellular activities CH64_3860 SM00450 Rhodanese Homology Domain CH64_3865 SM00382 ATPases associated with a variety of cellular activities CH64_3870 SM00487 DEAD-like helicases superfamily CH64_3870 SM00488 CH64_3870 CH64_3870 SM00491 CH64_3870 CH64_3875 SM00903 Flavin reductase like domain CH64_3877 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_3877 SM00091 PAS domain CH64_3877 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_3878 SM00382 ATPases associated with a variety of cellular activities CH64_3880 SM00062 Bacterial periplasmic substrate-binding proteins CH64_3880 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH64_3890 SM00382 ATPases associated with a variety of cellular activities CH64_3892 SM00852 Probable molybdopterin binding domain CH64_3895 SM00382 ATPases associated with a variety of cellular activities CH64_391 SM00836 DALR anticodon binding domain CH64_391 SM01016 Arginyl tRNA synthetase N terminal dom CH64_4 SM00829 Enoylreductase CH64_404 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH64_405 SM00382 ATPases associated with a variety of cellular activities CH64_408 SM00382 ATPases associated with a variety of cellular activities CH64_410 SM00257 Lysin motif CH64_419 SM00487 DEAD-like helicases superfamily CH64_419 SM00491 CH64_419 CH64_423 SM00341 Helicase and RNase D C-terminal CH64_423 SM00474 3'-5' exonuclease CH64_437 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH64_440 SM01005 Alanine racemase, C-terminal domain CH64_442 SM00052 Putative diguanylate phosphodiesterase CH64_442 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH64_442 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_442 SM00091 PAS domain CH64_442 SM00267 diguanylate cyclase CH64_447 SM00763 PrkA AAA domain CH64_450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH64_454 SM00870 CH64_454 CH64_458 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH64_458 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH64_458 SM00493 CH64_458 CH64_47 SM01091 Transporter associated domain CH64_470 SM00448 cheY-homologous receiver domain CH64_471 SM00528 Domain in histone-like proteins of HNS family CH64_479 SM00382 ATPases associated with a variety of cellular activities CH64_480 SM00382 ATPases associated with a variety of cellular activities CH64_482 SM00155 Phospholipase D. Active site motifs. CH64_483 SM00052 Putative diguanylate phosphodiesterase CH64_492 SM00749 bacterial OsmY and nodulation domain CH64_504 SM00363 S4 RNA-binding domain CH64_507 SM00822 CH64_507 CH64_51 SM00382 ATPases associated with a variety of cellular activities CH64_510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH64_510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH64_510 SM00493 CH64_510 CH64_517 SM00014 Acid phosphatase homologues CH64_519 SM00028 Tetratricopeptide repeats CH64_522 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CH64_525 SM01007 Class II Aldolase and Adducin N-terminal domain CH64_527 SM00420 helix_turn_helix, Deoxyribose operon repressor CH64_527 SM01134 CH64_527 CH64_531 SM00357 Cold shock protein domain CH64_531 SM00955 CH64_531 CH64_533 SM00478 endonuclease III CH64_533 SM00525 CH64_533 CH64_535 SM00900 CH64_535 CH64_537 SM00342 helix_turn_helix, arabinose operon control protein CH64_544 SM00382 ATPases associated with a variety of cellular activities CH64_546 SM00382 ATPases associated with a variety of cellular activities CH64_550 SM00382 ATPases associated with a variety of cellular activities CH64_552 SM00342 helix_turn_helix, arabinose operon control protein CH64_558 SM00354 helix_turn _helix lactose operon repressor CH64_572 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH64_590 SM00344 helix_turn_helix ASNC type CH64_593 SM00062 Bacterial periplasmic substrate-binding proteins CH64_599 SM00644 CH64_599 CH64_60 SM01350 CH64_60 CH64_611 SM00098 Alkaline phosphatase homologues CH64_617 SM00871 Bacterial transcription activator, effector binding domain CH64_620 SM00100 Cyclic nucleotide-monophosphate binding domain CH64_620 SM00419 helix_turn_helix, cAMP Regulatory protein CH64_623 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CH64_623 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CH64_627 SM00448 cheY-homologous receiver domain CH64_627 SM00862 Transcriptional regulatory protein, C terminal CH64_628 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH64_628 SM00387 Histidine kinase-like ATPases CH64_628 SM00388 His Kinase A (phosphoacceptor) domain CH64_633 SM00530 Helix-turn-helix XRE-family like proteins CH64_635 SM00382 ATPases associated with a variety of cellular activities CH64_635 SM00487 DEAD-like helicases superfamily CH64_635 SM00490 helicase superfamily c-terminal domain CH64_635 SM00847 Helicase associated domain (HA2) Add an annotation CH64_646 SM00890 Domain of unknown function CH64_652 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH64_655 SM00091 PAS domain CH64_655 SM00382 ATPases associated with a variety of cellular activities CH64_657 SM00953 CH64_657 CH64_664 SM00382 ATPases associated with a variety of cellular activities CH64_668 SM00382 ATPases associated with a variety of cellular activities CH64_669 SM00382 ATPases associated with a variety of cellular activities CH64_673 SM00849 Metallo-beta-lactamase superfamily CH64_679 SM00363 S4 RNA-binding domain CH64_684 SM00347 helix_turn_helix multiple antibiotic resistance protein CH64_694 SM00479 CH64_694 CH64_700 SM00354 helix_turn _helix lactose operon repressor CH64_71 SM00382 ATPases associated with a variety of cellular activities CH64_716 SM00382 ATPases associated with a variety of cellular activities CH64_738 SM00382 ATPases associated with a variety of cellular activities CH64_745 SM00411 bacterial (prokaryotic) histone like domain CH64_746 SM00873 B3/4 domain CH64_746 SM00874 tRNA synthetase B5 domain CH64_746 SM00896 Ferredoxin-fold anticodon binding domain CH64_751 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH64_761 SM00382 ATPases associated with a variety of cellular activities CH64_766 SM00382 ATPases associated with a variety of cellular activities CH64_778 SM00382 ATPases associated with a variety of cellular activities CH64_783 SM00644 CH64_783 CH64_784 SM00346 helix_turn_helix isocitrate lyase regulation CH64_789 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH64_789 SM00245 tail specific protease CH64_792 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH64_795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_795 SM00091 PAS domain CH64_795 SM00267 diguanylate cyclase CH64_797 SM01022 CH64_797 CH64_81 SM00382 ATPases associated with a variety of cellular activities CH64_820 SM00342 helix_turn_helix, arabinose operon control protein CH64_827 SM00990 CH64_827 CH64_836 SM00479 CH64_836 CH64_839 SM01022 CH64_839 CH64_841 SM00487 DEAD-like helicases superfamily CH64_841 SM00490 helicase superfamily c-terminal domain CH64_847 SM01091 Transporter associated domain CH64_857 SM00357 Cold shock protein domain CH64_868 SM00342 helix_turn_helix, arabinose operon control protein CH64_872 SM00382 ATPases associated with a variety of cellular activities CH64_873 SM00090 RIO-like kinase CH64_874 SM00858 CH64_874 CH64_876 SM01130 CH64_876 CH64_877 SM00346 helix_turn_helix isocitrate lyase regulation CH64_878 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_878 SM00091 PAS domain CH64_878 SM00267 diguanylate cyclase CH64_881 SM00342 helix_turn_helix, arabinose operon control protein CH64_890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH64_890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH64_892 SM00354 helix_turn _helix lactose operon repressor CH64_893 SM00640 Glycosyl hydrolases family 32 CH64_898 SM01329 CH64_898 CH64_9 SM00354 helix_turn _helix lactose operon repressor CH64_904 SM00448 cheY-homologous receiver domain CH64_904 SM00862 Transcriptional regulatory protein, C terminal CH64_905 SM00387 Histidine kinase-like ATPases CH64_905 SM00388 His Kinase A (phosphoacceptor) domain CH64_906 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH64_911 SM00382 ATPases associated with a variety of cellular activities CH64_913 SM00487 DEAD-like helicases superfamily CH64_913 SM00490 helicase superfamily c-terminal domain CH64_913 SM00982 CH64_913 CH64_913 SM01058 CarD-like/TRCF domain CH64_930 SM00825 Beta-ketoacyl synthase CH64_932 SM00822 CH64_932 CH64_933 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH64_939 SM00363 S4 RNA-binding domain CH64_941 SM00316 Ribosomal protein S1-like RNA-binding domain CH64_947 SM00421 helix_turn_helix, Lux Regulon CH64_949 SM00450 Rhodanese Homology Domain CH64_951 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH64_954 SM00387 Histidine kinase-like ATPases CH64_955 SM00421 helix_turn_helix, Lux Regulon CH64_955 SM00448 cheY-homologous receiver domain CH64_966 SM01091 Transporter associated domain CH64_969 SM00421 helix_turn_helix, Lux Regulon CH64_983 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH64_984 SM00992 Hemimethylated DNA-binding protein YccV like CH64_985 SM00881 CoA binding domain CH64_987 SM00851 MGS-like domain CH64_998 SM00825 Beta-ketoacyl synthase