locus-tag	class	description
LGL87_00010	COG0592	DNA-directed DNA polymerase activity
LGL87_00020	COG0187	DNA topoisomerase II activity
LGL87_00025	COG0561	phosphatase activity
LGL87_00030	COG0823	Involved in the tonB-independent uptake of proteins
LGL87_00035	COG5645	(Lipo)protein
LGL87_00050	COG0569	domain protein
LGL87_00050	COG2985	domain, Protein
LGL87_00055	COG3977	Valine--pyruvate aminotransferase
LGL87_00060	COG2885	chlorophyll binding
LGL87_00085	COG2818	Glycosylase
LGL87_00135	COG2213	PTS system mannitol-specific
LGL87_00135	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL87_00145	COG3722	fumarate hydratase activity
LGL87_00155	COG2258	MOSC domain
LGL87_00160	COG0840	transmembrane signaling receptor activity
LGL87_00165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LGL87_00180	COG0437	4 iron, 4 sulfur cluster binding
LGL87_00185	COG2864	formate dehydrogenase
LGL87_00195	COG1921	L-seryl-tRNASec selenium transferase activity
LGL87_00200	COG3276	selenocysteine insertion sequence binding
LGL87_00205	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LGL87_00215	COG3274	enterobacterial common antigen metabolic process
LGL87_00255	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LGL87_00260	COG2986	histidine ammonia-lyase
LGL87_00280	COG2194	sulfuric ester hydrolase activity
LGL87_00285	COG2197	response regulator
LGL87_00290	COG3851	Histidine kinase
LGL87_00295	COG2271	Major facilitator Superfamily
LGL87_00305	COG0747	negative chemotaxis
LGL87_00310	COG0601	transmembrane transport
LGL87_00315	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LGL87_00320	COG0444	Belongs to the ABC transporter superfamily
LGL87_00325	COG4608	Belongs to the ABC transporter superfamily
LGL87_00330	COG2194	sulfuric ester hydrolase activity
LGL87_00355	COG1215	transferase activity, transferring glycosyl groups
LGL87_00360	COG1215	transferase activity, transferring glycosyl groups
LGL87_00365	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LGL87_00370	COG0457	Tetratricopeptide repeat
LGL87_00370	COG3118	belongs to the thioredoxin family
LGL87_00375	COG2200	EAL domain
LGL87_00375	COG2199	diguanylate cyclase activity
LGL87_00380	COG1301	dicarboxylic acid transport
LGL87_00385	COG0612	Peptidase, M16
LGL87_00390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LGL87_00395	COG1942	4-Oxalocrotonate Tautomerase
LGL87_00400	COG2200	EAL domain
LGL87_00405	COG2134	cdp-diacylglycerol pyrophosphatase
LGL87_00410	COG1295	ribonuclease BN
LGL87_00420	COG1301	dicarboxylic acid transport
LGL87_00425	COG0626	cystathionine gamma-synthase activity
LGL87_00440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL87_00445	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LGL87_00450	COG0339	signal peptide processing
LGL87_00455	COG0742	ribosomal rna small subunit methyltransferase
LGL87_00465	COG0589	response to stress
LGL87_00475	COG0306	phosphate transporter
LGL87_00480	COG2081	HI0933 family
LGL87_00525	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LGL87_00655	COG1247	-acetyltransferase
LGL87_00665	COG1741	Belongs to the pirin family
LGL87_00670	COG1609	Transcriptional regulator
LGL87_00680	COG3265	gluconokinase activity
LGL87_00685	COG2095	MarC family integral membrane protein
LGL87_00690	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LGL87_00695	COG3275	phosphorelay sensor kinase activity
LGL87_00700	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LGL87_00705	COG1523	belongs to the glycosyl hydrolase 13 family
LGL87_00710	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LGL87_00715	COG0297	glycogen (starch) synthase activity
LGL87_00720	COG0058	SHG alpha-glucan phosphorylase activity
LGL87_00725	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LGL87_00730	COG1349	DNA-binding transcription factor activity
LGL87_00735	COG0705	Rhomboid family
LGL87_00745	COG2909	trisaccharide binding
LGL87_00750	COG0058	SHG alpha-glucan phosphorylase activity
LGL87_00755	COG1640	4-alpha-glucanotransferase
LGL87_00765	COG1040	competence protein
LGL87_00770	COG0596	Alpha beta hydrolase
LGL87_00790	COG1918	ferrous iron import across plasma membrane
LGL87_00795	COG2183	response to ionizing radiation
LGL87_00820	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LGL87_00835	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LGL87_00845	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LGL87_00850	COG1011	Hydrolase
LGL87_00860	COG0494	nUDIX hydrolase
LGL87_00865	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LGL87_00890	COG4796	Type ii and iii secretion system protein
LGL87_00895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LGL87_00915	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LGL87_00925	COG0180	Tryptophanyl-tRNA synthetase
LGL87_00945	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LGL87_00950	COG0402	S-adenosylhomocysteine deaminase activity
LGL87_00955	COG0738	Major facilitator superfamily
LGL87_00970	COG1609	Transcriptional regulator
LGL87_00975	COG1486	melibiose metabolic process
LGL87_00980	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LGL87_00995	COG1289	transmembrane transporter activity
LGL87_01000	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LGL87_01005	COG1765	OsmC-like protein
LGL87_01030	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LGL87_01035	COG3954	Phosphoribulokinase
LGL87_01045	COG0429	hydrolase of the alpha beta-hydrolase fold
LGL87_01055	COG0859	PFAM glycosyl transferase family 9
LGL87_01060	COG1216	Glycosyl transferase, family 2
LGL87_01065	COG0488	(ABC) transporter
LGL87_01070	COG2249	NAD(P)H dehydrogenase (quinone) activity
LGL87_01080	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LGL87_01085	COG1047	Peptidyl-prolyl cis-trans
LGL87_01095	COG0545	Peptidyl-prolyl cis-trans isomerase
LGL87_01100	COG2964	Protein conserved in bacteria
LGL87_01110	COG2923	Belongs to the DsrF TusC family
LGL87_01115	COG2168	tRNA wobble position uridine thiolation
LGL87_01120	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LGL87_01125	COG0049	tRNA binding
LGL87_01135	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LGL87_01150	COG0051	transcription antitermination factor activity, RNA binding
LGL87_01155	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LGL87_01165	COG0089	rRNA binding
LGL87_01170	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LGL87_01175	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LGL87_01180	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LGL87_01190	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LGL87_01195	COG0255	Belongs to the universal ribosomal protein uL29 family
LGL87_01200	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LGL87_01205	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LGL87_01215	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LGL87_01240	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LGL87_01245	COG1841	ribosomal large subunit assembly
LGL87_01250	COG0200	Binds to the 23S rRNA
LGL87_01255	COG0201	protein transport
LGL87_01260	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LGL87_01265	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LGL87_01275	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LGL87_01285	COG0203	ribosomal protein L17
LGL87_01290	COG0789	Transcriptional regulator
LGL87_01295	COG3036	rescue of stalled ribosome
LGL87_01300	COG1970	mechanosensitive ion channel activity
LGL87_01310	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LGL87_01310	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LGL87_01315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LGL87_01320	COG0242	peptide deformylase activity
LGL87_01325	COG0758	DNA mediated transformation
LGL87_01330	COG2922	Belongs to the Smg family
LGL87_01335	COG0551	DNA topoisomerase type I activity
LGL87_01340	COG0009	L-threonylcarbamoyladenylate synthase
LGL87_01350	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LGL87_01380	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LGL87_01385	COG3162	membrane
LGL87_01390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LGL87_01395	COG1301	dicarboxylic acid transport
LGL87_01400	COG2391	methyltransferase activity
LGL87_01405	COG0425	Belongs to the sulfur carrier protein TusA family
LGL87_01415	COG1086	Polysaccharide biosynthesis protein
LGL87_01420	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LGL87_01425	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LGL87_01430	COG2089	acid synthase
LGL87_01450	COG2755	lipolytic protein G-D-S-L family
LGL87_01450	COG1083	cytidylyl-transferase
LGL87_01455	COG1028	Short-chain dehydrogenase reductase Sdr
LGL87_01475	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LGL87_01475	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL87_01480	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LGL87_01500	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LGL87_01520	COG1309	transcriptional regulator
LGL87_01525	COG4232	protein-disulfide reductase activity
LGL87_01535	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LGL87_01565	COG1509	lysine 2,3-aminomutase activity
LGL87_01575	COG3397	chitin binding
LGL87_01595	COG3188	usher protein
LGL87_01615	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LGL87_01620	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LGL87_01625	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LGL87_01630	COG1053	succinate dehydrogenase
LGL87_01635	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LGL87_01640	COG1511	domain protein
LGL87_01640	COG3264	Mechanosensitive ion channel
LGL87_01645	COG0688	phosphatidylethanolamine metabolic process
LGL87_01650	COG1162	GTPase activity
LGL87_01655	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LGL87_01675	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LGL87_01680	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LGL87_01680	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LGL87_01685	COG0802	atpase or kinase
LGL87_01690	COG0860	N-Acetylmuramoyl-L-alanine amidase
LGL87_01700	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LGL87_01710	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LGL87_01715	COG0330	HflC and HflK could
LGL87_01720	COG0330	HflC and HflK could
LGL87_01725	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LGL87_01730	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LGL87_01735	COG1959	2 iron, 2 sulfur cluster binding
LGL87_01740	COG0557	exoribonuclease II activity
LGL87_01745	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL87_01765	COG3121	Chaperone
LGL87_01770	COG3188	usher protein
LGL87_01790	COG1073	alpha beta
LGL87_01800	COG0360	Binds together with S18 to 16S ribosomal RNA
LGL87_01805	COG2965	DNA replication, synthesis of RNA primer
LGL87_01810	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LGL87_01815	COG0359	binds to the 23S rRNA
LGL87_01820	COG3061	Opacity-associated protein A
LGL87_01825	COG0545	Peptidyl-prolyl cis-trans isomerase
LGL87_01835	COG0737	Belongs to the 5'-nucleotidase family
LGL87_01845	COG1218	3'(2'),5'-bisphosphate nucleotidase
LGL87_01850	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LGL87_01860	COG1253	flavin adenine dinucleotide binding
LGL87_01865	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LGL87_01870	COG0729	surface antigen
LGL87_01875	COG2911	Protein conserved in bacteria
LGL87_01880	COG2105	PFAM AIG2 family protein
LGL87_01885	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LGL87_01895	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LGL87_01910	COG3423	Transcriptional regulator
LGL87_01925	COG0142	geranyltranstransferase activity
LGL87_01940	COG0697	spore germination
LGL87_01945	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LGL87_01950	COG0642	Histidine kinase
LGL87_01955	COG0745	RESPONSE REGULATOR receiver
LGL87_01960	COG2027	D-alanyl-D-alanine carboxypeptidase
LGL87_01970	COG1534	Rna-binding protein
LGL87_01975	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LGL87_01985	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LGL87_01990	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LGL87_01995	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LGL87_02015	COG0195	Participates in both transcription termination and antitermination
LGL87_02025	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LGL87_02040	COG1185	polyribonucleotide nucleotidyltransferase activity
LGL87_02055	COG0513	Belongs to the DEAD box helicase family
LGL87_02060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LGL87_02065	COG0814	amino acid
LGL87_02075	COG0826	peptidase U32
LGL87_02080	COG0826	peptidase U32
LGL87_02085	COG3154	lipid carrier protein
LGL87_02090	COG3153	acetyltransferase
LGL87_02095	COG2827	Endonuclease containing a URI domain
LGL87_02100	COG0531	amino acid
LGL87_02105	COG1982	Orn Lys Arg decarboxylase major
LGL87_02115	COG3787	Belongs to the UPF0306 family
LGL87_02120	COG0702	epimerase
LGL87_02125	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LGL87_02130	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
LGL87_02135	COG3454	Phosphonate metabolism
LGL87_02140	COG4778	phosphonate C-P lyase system protein PhnL
LGL87_02145	COG4107	phosphonate C-P lyase system protein PhnK
LGL87_02150	COG3627	carbon phosphorus lyase activity
LGL87_02155	COG3626	phosphonate metabolism
LGL87_02160	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LGL87_02165	COG3624	Phosphonate C-P lyase system protein PhnG
LGL87_02185	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LGL87_02200	COG2927	DNA polymerase III (CHI subunit)
LGL87_02205	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LGL87_02210	COG0795	lipopolysaccharide-transporting ATPase activity
LGL87_02215	COG0795	lipopolysaccharide-transporting ATPase activity
LGL87_02265	COG5492	domain, Protein
LGL87_02285	COG3119	arylsulfatase activity
LGL87_02290	COG1349	DNA-binding transcription factor activity
LGL87_02300	COG2222	sugar isomerase
LGL87_02305	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_02310	COG3715	PTS system
LGL87_02315	COG3716	PTS system mannose fructose sorbose family IID component
LGL87_02325	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LGL87_02335	COG1028	Short-chain dehydrogenase reductase Sdr
LGL87_02345	COG0641	radical SAM
LGL87_02350	COG3119	arylsulfatase activity
LGL87_02375	COG0859	PFAM glycosyl transferase family 9
LGL87_02390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL87_02395	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL87_02405	COG2376	Dihydroxyacetone kinase
LGL87_02410	COG1461	Dihydroxyacetone kinase
LGL87_02415	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
LGL87_02415	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL87_02415	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LGL87_02455	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
LGL87_02470	COG2823	Periplasmic or secreted lipoprotein
LGL87_02480	COG4667	esterase of the alpha-beta hydrolase superfamily
LGL87_02485	COG0084	hydrolase, TatD family'
LGL87_02490	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LGL87_02505	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LGL87_02515	COG3726	membrane protein affecting hemolysin expression
LGL87_02520	COG0560	Phosphoserine phosphatase
LGL87_02535	COG0488	(ABC) transporter
LGL87_02555	COG0741	lytic transglycosylase activity
LGL87_02560	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LGL87_02565	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LGL87_02570	COG0406	alpha-ribazole phosphatase activity
LGL87_02575	COG3708	Transcriptional regulator
LGL87_02575	COG2207	Transcriptional regulator
LGL87_02580	COG3045	CreA protein
LGL87_02585	COG0745	RESPONSE REGULATOR receiver
LGL87_02620	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LGL87_02625	COG0521	Mo-molybdopterin cofactor biosynthetic process
LGL87_02630	COG0477	Major facilitator Superfamily
LGL87_02640	COG1584	GPR1 FUN34 yaaH family protein
LGL87_02645	COG0443	Heat shock 70 kDa protein
LGL87_02655	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LGL87_02660	COG0583	DNA-binding transcription factor activity
LGL87_02670	COG0196	riboflavin kinase activity
LGL87_02680	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LGL87_02685	COG1047	Peptidyl-prolyl cis-trans
LGL87_02690	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LGL87_02705	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LGL87_02715	COG2966	Psort location CytoplasmicMembrane, score
LGL87_02740	COG2967	ApaG domain
LGL87_02745	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LGL87_02750	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LGL87_02760	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LGL87_02770	COG0564	pseudouridine synthase activity
LGL87_02775	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LGL87_02780	COG0417	DNA replication proofreading
LGL87_02785	COG0586	Pfam SNARE associated Golgi protein
LGL87_02795	COG1178	ABC-type Fe3 transport system permease component
LGL87_02800	COG4143	(ABC) transporter
LGL87_02815	COG2814	Major facilitator Superfamily
LGL87_02825	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LGL87_02830	COG0473	3-isopropylmalate dehydrogenase activity
LGL87_02845	COG1022	Amp-dependent synthetase and ligase
LGL87_02850	COG0028	Belongs to the TPP enzyme family
LGL87_02870	COG0675	Transposase, IS605 OrfB family
LGL87_02885	COG0275	rRNA processing
LGL87_02890	COG3116	cell division
LGL87_02895	COG0768	penicillin binding
LGL87_02900	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LGL87_02905	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LGL87_02920	COG0772	Belongs to the SEDS family
LGL87_02925	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LGL87_02930	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LGL87_02940	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LGL87_02945	COG0849	cell division
LGL87_02950	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LGL87_02975	COG0494	nUDIX hydrolase
LGL87_02995	COG0516	GMP reductase activity
LGL87_03000	COG1459	type II secretion system
LGL87_03005	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL87_03010	COG4969	Belongs to the N-Me-Phe pilin family
LGL87_03025	COG3725	Membrane protein required for beta-lactamase induction
LGL87_03030	COG1113	amino acid transport
LGL87_03035	COG2186	Transcriptional regulator
LGL87_03040	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LGL87_03045	COG0508	dehydrogenase complex catalyzes the overall conversion of
LGL87_03050	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL87_03060	COG1049	propionate catabolic process, 2-methylcitrate cycle
LGL87_03065	COG3112	Uncharacterised protein family (UPF0231)
LGL87_03080	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LGL87_03090	COG2132	Multicopper oxidase
LGL87_03100	COG0288	reversible hydration of carbon dioxide
LGL87_03105	COG1131	(ABC) transporter
LGL87_03110	COG0842	Transport permease protein
LGL87_03115	COG0726	polysaccharide deacetylase
LGL87_03120	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LGL87_03125	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LGL87_03130	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LGL87_03135	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LGL87_03140	COG0617	tRNA 3'-terminal CCA addition
LGL87_03155	COG1489	DNA binding
LGL87_03160	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LGL87_03165	COG1643	Atp-dependent helicase
LGL87_03170	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LGL87_03175	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LGL87_03185	COG0316	Belongs to the HesB IscA family
LGL87_03190	COG2860	membrane
LGL87_03200	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LGL87_03205	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LGL87_03210	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LGL87_03220	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LGL87_03225	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LGL87_03230	COG3956	TIGRFAM MazG family protein
LGL87_03235	COG0504	CTP synthase activity
LGL87_03245	COG0602	queuosine metabolic process
LGL87_03250	COG0720	synthase
LGL87_03255	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LGL87_03265	COG0175	sulfate reduction
LGL87_03280	COG2234	aminopeptidase activity
LGL87_03285	COG1648	precorrin-2 dehydrogenase activity
LGL87_03285	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LGL87_03290	COG0175	sulfate reduction
LGL87_03295	COG2895	sulfate adenylyltransferase (ATP) activity
LGL87_03300	COG0529	Catalyzes the synthesis of activated sulfate
LGL87_03310	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LGL87_03320	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
LGL87_03325	COG0585	pseudouridine synthase activity
LGL87_03330	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LGL87_03340	COG4942	peptidase
LGL87_03340	COG1388	LysM domain
LGL87_03345	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LGL87_03350	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LGL87_03420	COG2205	protein histidine kinase activity
LGL87_03420	COG0784	Response regulator, receiver
LGL87_03445	COG0741	lytic transglycosylase activity
LGL87_03580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LGL87_03610	COG3397	chitin binding
LGL87_03620	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LGL87_03665	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL87_03675	COG3031	protein transport across the cell outer membrane
LGL87_03700	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LGL87_03700	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LGL87_03715	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LGL87_03720	COG2137	regulation of response to DNA damage stimulus
LGL87_03725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LGL87_03730	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LGL87_03765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LGL87_03770	COG1238	metal cluster binding
LGL87_03775	COG2918	glutathione biosynthetic process
LGL87_03780	COG1854	S-ribosylhomocysteine lyase activity
LGL87_03785	COG4536	flavin adenine dinucleotide binding
LGL87_03790	COG4137	Cytochrome C assembly protein
LGL87_03795	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LGL87_03805	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LGL87_03810	COG0336	Belongs to the RNA methyltransferase TrmD family
LGL87_03815	COG0335	large ribosomal subunit rRNA binding
LGL87_03820	COG3137	Salt-induced outer membrane protein
LGL87_03825	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LGL87_03830	COG3279	Response regulator of the LytR AlgR family
LGL87_03835	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL87_03840	COG1605	Chorismate mutase
LGL87_03840	COG0287	Prephenate dehydrogenase
LGL87_03845	COG1605	Chorismate mutase
LGL87_03845	COG0077	Prephenate dehydratase
LGL87_03855	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LGL87_03860	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL87_03865	COG0564	pseudouridine synthase activity
LGL87_03870	COG1496	oxidoreductase activity
LGL87_03875	COG0542	response to heat
LGL87_03910	COG3021	interspecies interaction between organisms
LGL87_03915	COG1388	LysM domain
LGL87_03915	COG0741	lytic transglycosylase activity
LGL87_03925	COG2226	methyltransferase
LGL87_03935	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LGL87_03945	COG1960	acyl-CoA dehydrogenase activity
LGL87_03950	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LGL87_03955	COG0121	glutamine amidotransferase
LGL87_03960	COG3034	peptidoglycan biosynthetic process
LGL87_03970	COG1805	sodium ion transport
LGL87_03975	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL87_03980	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL87_03985	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL87_03995	COG1477	protein flavinylation
LGL87_04000	COG2991	Protein conserved in bacteria
LGL87_04010	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LGL87_04015	COG2195	Cleaves the N-terminal amino acid of tripeptides
LGL87_04020	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LGL87_04025	COG1073	alpha beta
LGL87_04040	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LGL87_04075	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LGL87_04095	COG4126	flavin adenine dinucleotide binding
LGL87_04105	COG2974	May be involved in recombination
LGL87_04110	COG1940	carbohydrate kinase activity
LGL87_04115	COG0419	ATPase involved in DNA repair
LGL87_04120	COG0420	3'-5' exonuclease activity
LGL87_04125	COG0745	RESPONSE REGULATOR receiver
LGL87_04130	COG5002	protein histidine kinase activity
LGL87_04145	COG1113	amino acid transport
LGL87_04150	COG0366	Alpha amylase catalytic
LGL87_04155	COG0300	oxidoreductase activity
LGL87_04160	COG0450	alkyl hydroperoxide reductase
LGL87_04165	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LGL87_04180	COG1862	Preprotein translocase
LGL87_04185	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LGL87_04190	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LGL87_04195	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LGL87_04200	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LGL87_04200	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LGL87_04205	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LGL87_04215	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LGL87_04220	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LGL87_04225	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LGL87_04230	COG0142	geranyltranstransferase activity
LGL87_04265	COG0693	protein deglycase activity
LGL87_04270	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LGL87_04275	COG1666	GTP binding
LGL87_04280	COG2814	Major facilitator Superfamily
LGL87_04290	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LGL87_04295	COG1845	cytochrome c oxidase, subunit III
LGL87_04300	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LGL87_04305	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LGL87_04315	COG2223	nitrite transmembrane transporter activity
LGL87_04320	COG3056	Lipoprotein
LGL87_04325	COG0271	Belongs to the BolA IbaG family
LGL87_04335	COG0740	serine-type endopeptidase activity
LGL87_04340	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LGL87_04345	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LGL87_04350	COG0776	regulation of translation
LGL87_04355	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LGL87_04360	COG1555	photosystem II stabilization
LGL87_04365	COG0824	Thioesterase
LGL87_04370	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LGL87_04375	COG4533	DNA binding
LGL87_04390	COG1522	sequence-specific DNA binding
LGL87_04395	COG1132	(ABC) transporter
LGL87_04400	COG1132	(ABC) transporter
LGL87_04405	COG0347	Belongs to the P(II) protein family
LGL87_04410	COG0004	ammonium transporteR
LGL87_04415	COG1946	Acyl-CoA thioesterase
LGL87_04420	COG3695	enzyme binding
LGL87_04445	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LGL87_04450	COG0254	rRNA binding
LGL87_04455	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL87_04460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL87_04465	COG1309	transcriptional regulator
LGL87_04470	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LGL87_04475	COG3264	Mechanosensitive ion channel
LGL87_04475	COG1196	nuclear chromosome segregation
LGL87_04490	COG2832	Protein of unknown function (DUF454)
LGL87_04495	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LGL87_04535	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LGL87_04540	COG0326	Molecular chaperone. Has ATPase activity
LGL87_04560	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LGL87_04570	COG4651	solute:proton antiporter activity
LGL87_04570	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LGL87_04575	COG0737	Belongs to the 5'-nucleotidase family
LGL87_04580	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LGL87_04585	COG3735	TraB family
LGL87_04590	COG2217	Heavy metal translocating P-type atpase
LGL87_04595	COG0789	Transcriptional regulator
LGL87_04600	COG1585	Membrane protein implicated in regulation of membrane protease activity
LGL87_04605	COG0330	HflC and HflK could
LGL87_04610	COG3118	belongs to the thioredoxin family
LGL87_04615	COG0300	oxidoreductase activity
LGL87_04620	COG2755	lipolytic protein G-D-S-L family
LGL87_04625	COG4181	ATPase activity
LGL87_04630	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LGL87_04635	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LGL87_04640	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LGL87_04645	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LGL87_04650	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LGL87_04675	COG3188	usher protein
LGL87_04680	COG3121	Chaperone
LGL87_04710	COG2501	S4 domain
LGL87_04715	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LGL87_04725	COG0582	viral genome integration into host DNA
LGL87_04745	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
LGL87_04750	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
LGL87_04765	COG0732	type I restriction modification DNA specificity domain
LGL87_04770	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LGL87_04800	COG3596	GTP binding
LGL87_04830	COG2003	Belongs to the UPF0758 family
LGL87_04860	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LGL87_04865	COG1393	Belongs to the ArsC family
LGL87_04875	COG1022	Amp-dependent synthetase and ligase
LGL87_04900	COG3038	cytochrome b561
LGL87_04930	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LGL87_04940	COG1215	transferase activity, transferring glycosyl groups
LGL87_04960	COG3250	beta-galactosidase activity
LGL87_04975	COG1309	transcriptional regulator
LGL87_05005	COG2197	response regulator
LGL87_05010	COG1278	Cold shock
LGL87_05030	COG3706	GGDEF domain
LGL87_05040	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LGL87_05050	COG2921	Belongs to the UPF0250 family
LGL87_05055	COG1686	Belongs to the peptidase S11 family
LGL87_05060	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LGL87_05065	COG0772	Belongs to the SEDS family
LGL87_05070	COG0768	penicillin binding
LGL87_05075	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LGL87_05080	COG0799	negative regulation of ribosome biogenesis
LGL87_05085	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LGL87_05090	COG1466	dna polymerase III delta subunit
LGL87_05095	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LGL87_05105	COG2888	peptidyl-tyrosine sulfation
LGL87_05110	COG1126	abc transporter atp-binding protein
LGL87_05115	COG0765	amino acid transport
LGL87_05120	COG0765	amino acid transport
LGL87_05130	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LGL87_05135	COG4535	Mg2 and Co2 transporter CorC
LGL87_05140	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LGL87_05145	COG1702	phosphate starvation-inducible protein PhoH
LGL87_05150	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LGL87_05155	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL87_05190	COG0367	asparagine synthase
LGL87_05195	COG0647	UMP catabolic process
LGL87_05200	COG1846	Transcriptional regulator
LGL87_05200	COG1940	carbohydrate kinase activity
LGL87_05205	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LGL87_05215	COG1263	PTS System
LGL87_05215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_05215	COG2190	(PTS) system
LGL87_05240	COG0735	belongs to the Fur family
LGL87_05250	COG0840	transmembrane signaling receptor activity
LGL87_05260	COG0596	Alpha beta hydrolase
LGL87_05265	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LGL87_05270	COG0033	Phosphoglucomutase
LGL87_05280	COG0745	RESPONSE REGULATOR receiver
LGL87_05285	COG2205	protein histidine kinase activity
LGL87_05290	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LGL87_05295	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LGL87_05315	COG3272	Protein of unknown function (DUF1722)
LGL87_05320	COG0415	Belongs to the DNA photolyase family
LGL87_05325	COG5212	phosphodiesterase
LGL87_05330	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LGL87_05335	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LGL87_05340	COG1984	allophanate hydrolase subunit 2
LGL87_05345	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LGL87_05380	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LGL87_05385	COG1053	succinate dehydrogenase
LGL87_05390	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LGL87_05395	COG0567	Dehydrogenase, E1 component
LGL87_05400	COG0508	dehydrogenase complex catalyzes the overall conversion of
LGL87_05405	COG0045	succinate-CoA ligase (ADP-forming) activity
LGL87_05410	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LGL87_05415	COG0737	Belongs to the 5'-nucleotidase family
LGL87_05420	COG1271	oxidase subunit
LGL87_05425	COG1294	oxidase, subunit
LGL87_05430	COG4890	Cyd operon protein YbgT
LGL87_05435	COG3790	cyd operon protein YbgE
LGL87_05440	COG0824	Thioesterase
LGL87_05445	COG0811	peptide transport
LGL87_05450	COG0848	biopolymer transport protein
LGL87_05455	COG3064	Membrane
LGL87_05455	COG3064	Membrane
LGL87_05460	COG0823	Involved in the tonB-independent uptake of proteins
LGL87_05465	COG2885	chlorophyll binding
LGL87_05470	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LGL87_05510	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LGL87_05520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_05520	COG2205	protein histidine kinase activity
LGL87_05530	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL87_05535	COG0588	phosphoglycerate mutase activity
LGL87_05545	COG2017	converts alpha-aldose to the beta-anomer
LGL87_05555	COG1085	galactose-1-phosphate uridylyltransferase
LGL87_05560	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LGL87_05575	COG2005	Transcriptional regulator
LGL87_05575	COG3585	molybdate ion transport
LGL87_05585	COG0725	ABC transporter, periplasmic molybdate-binding protein
LGL87_05590	COG4149	molybdate abc transporter
LGL87_05600	COG0561	phosphatase activity
LGL87_05605	COG2706	6-phosphogluconolactonase activity
LGL87_05620	COG0156	8-amino-7-oxononanoate synthase activity
LGL87_05625	COG2226	methyltransferase
LGL87_05640	COG0556	nucleotide-excision repair
LGL87_05645	COG4628	conserved protein (DUF2132)
LGL87_05660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL87_05665	COG1120	ATPase activity
LGL87_05670	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LGL87_05675	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LGL87_05685	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LGL87_05690	COG0314	molybdopterin synthase activity
LGL87_05695	COG0670	Belongs to the BI1 family
LGL87_05700	COG0842	Transport permease protein
LGL87_05705	COG0842	Transport permease protein
LGL87_05710	COG1131	(ABC) transporter
LGL87_05715	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL87_05720	COG1309	transcriptional regulator
LGL87_05725	COG0513	Belongs to the DEAD box helicase family
LGL87_05730	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL87_05740	COG1686	Belongs to the peptidase S11 family
LGL87_05745	COG0277	FAD linked oxidase domain protein
LGL87_05765	COG2261	transglycosylase associated protein
LGL87_05775	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LGL87_05785	COG3639	organic phosphonate transmembrane transporter activity
LGL87_05790	COG4807	Protein conserved in bacteria
LGL87_05795	COG2897	thiosulfate sulfurtransferase activity
LGL87_05800	COG1732	Glycine betaine
LGL87_05805	COG1174	glycine betaine transport
LGL87_05810	COG1125	glycine betaine transport
LGL87_05815	COG1174	glycine betaine transport
LGL87_05820	COG0531	amino acid
LGL87_05825	COG1982	Orn Lys Arg decarboxylase major
LGL87_05835	COG0697	spore germination
LGL87_05850	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LGL87_05855	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LGL87_05860	COG1126	abc transporter atp-binding protein
LGL87_05865	COG0765	amino acid transport
LGL87_05870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_05885	COG5006	permease, DMT superfamily
LGL87_05890	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LGL87_05895	COG2239	Acts as a magnesium transporter
LGL87_05900	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LGL87_05905	COG0488	(ABC) transporter
LGL87_05910	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LGL87_05915	COG0303	'Molybdopterin
LGL87_05935	COG0583	DNA-binding transcription factor activity
LGL87_05940	COG0477	Major facilitator Superfamily
LGL87_05945	COG0302	gtp cyclohydrolase
LGL87_05950	COG2311	Membrane
LGL87_05975	COG2949	membrane
LGL87_05980	COG0281	malic enzyme
LGL87_05990	COG0583	DNA-binding transcription factor activity
LGL87_06000	COG1346	cytolysis
LGL87_06005	COG1380	Effector of murein hydrolase LrgA
LGL87_06015	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LGL87_06015	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LGL87_06020	COG0489	protein tyrosine kinase activity
LGL87_06025	COG0572	uridine kinase
LGL87_06030	COG0717	Belongs to the dCTP deaminase family
LGL87_06035	COG2982	Protein involved in outer membrane biogenesis
LGL87_06040	COG3069	C4-dicarboxylate transmembrane transporter activity
LGL87_06045	COG1253	flavin adenine dinucleotide binding
LGL87_06050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LGL87_06055	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LGL87_06060	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LGL87_06070	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LGL87_06070	COG0140	phosphoribosyl-ATP diphosphatase activity
LGL87_06080	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LGL87_06090	COG0131	Imidazoleglycerol-phosphate dehydratase
LGL87_06090	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LGL87_06095	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LGL87_06100	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LGL87_06115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL87_06120	COG0625	glutathione transferase activity
LGL87_06135	COG0626	cystathionine gamma-synthase activity
LGL87_06145	COG1686	Belongs to the peptidase S11 family
LGL87_06150	COG1760	l-serine dehydratase
LGL87_06155	COG0814	amino acid
LGL87_06160	COG1349	DNA-binding transcription factor activity
LGL87_06170	COG0671	phosphoesterase, PA-phosphatase related
LGL87_06225	COG0569	domain protein
LGL87_06225	COG2985	domain, Protein
LGL87_06245	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LGL87_06250	COG3842	ATPase activity
LGL87_06255	COG1176	ABC-type spermidine putrescine transport system, permease component I
LGL87_06275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_06280	COG4160	amino acid transport
LGL87_06285	COG4215	(ABC) transporter
LGL87_06290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_06295	COG1126	abc transporter atp-binding protein
LGL87_06305	COG0393	Putative heavy-metal-binding
LGL87_06310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL87_06315	COG0702	epimerase
LGL87_06320	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LGL87_06325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL87_06330	COG1151	hydroxylamine reductase activity
LGL87_06335	COG2431	L-lysine efflux transmembrane transporter activity
LGL87_06340	COG3593	DNA synthesis involved in DNA repair
LGL87_06350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL87_06360	COG1278	Cold shock
LGL87_06365	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LGL87_06370	COG0542	response to heat
LGL87_06375	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LGL87_06385	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LGL87_06395	COG0492	ferredoxin-NADP+ reductase activity
LGL87_06400	COG1522	sequence-specific DNA binding
LGL87_06405	COG1674	ftsk spoiiie
LGL87_06405	COG3107	peptidoglycan biosynthetic process
LGL87_06410	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LGL87_06415	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LGL87_06420	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LGL87_06425	COG2814	Major facilitator Superfamily
LGL87_06430	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LGL87_06435	COG1882	Formate acetyltransferase
LGL87_06440	COG2116	formate transmembrane transporter activity
LGL87_06445	COG1944	ATP diphosphatase activity
LGL87_06450	COG0252	asparaginase activity
LGL87_06460	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LGL87_06470	COG0539	negative regulation of cytoplasmic translation
LGL87_06480	COG0658	competence protein
LGL87_06480	COG2333	competence protein COMEC
LGL87_06490	COG1663	tetraacyldisaccharide 4'-kinase activity
LGL87_06495	COG5383	Protein conserved in bacteria
LGL87_06505	COG1278	Cold shock
LGL87_06510	COG2835	tetraacyldisaccharide 4'-kinase activity
LGL87_06515	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LGL87_06520	COG3173	Aminoglycoside phosphotransferase
LGL87_06525	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LGL87_06530	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LGL87_06535	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
LGL87_06545	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LGL87_06550	COG2989	Protein conserved in bacteria
LGL87_06555	COG3108	Peptidase M15
LGL87_06560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LGL87_06565	COG1448	Aminotransferase
LGL87_06580	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LGL87_06585	COG0308	aminopeptidase N
LGL87_06590	COG0167	dihydroorotate dehydrogenase activity
LGL87_06605	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LGL87_06605	COG0116	Belongs to the methyltransferase superfamily
LGL87_06610	COG0488	(ABC) transporter
LGL87_06615	COG2995	paraquat-inducible protein a
LGL87_06620	COG3008	intermembrane lipid transfer
LGL87_06620	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LGL87_06625	COG3009	Protein conserved in bacteria
LGL87_06630	COG3130	regulation of translation
LGL87_06635	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LGL87_06640	COG1067	ATP-dependent peptidase activity
LGL87_06645	COG3120	sequence-specific DNA binding
LGL87_06655	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
LGL87_06660	COG3070	regulator of competence-specific genes
LGL87_06665	COG1289	transmembrane transporter activity
LGL87_06670	COG3304	Inner membrane component domain
LGL87_06675	COG0210	DNA helicase
LGL87_06680	COG1803	Methylglyoxal synthase
LGL87_06690	COG1832	CoA-binding protein
LGL87_06695	COG3785	DNA binding
LGL87_06700	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LGL87_06705	COG1254	Belongs to the acylphosphatase family
LGL87_06710	COG2920	part of a sulfur-relay system
LGL87_06720	COG0288	reversible hydration of carbon dioxide
LGL87_06740	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LGL87_06745	COG2943	transferase activity, transferring hexosyl groups
LGL87_06765	COG1560	Kdo2-lipid A biosynthetic process
LGL87_06775	COG0628	permease
LGL87_06800	COG0418	dihydroorotase activity
LGL87_06805	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LGL87_06815	COG1530	ribonuclease E activity
LGL87_06820	COG0564	pseudouridine synthase activity
LGL87_06825	COG0424	maF-like protein
LGL87_06830	COG1399	metal-binding, possibly nucleic acid-binding protein
LGL87_06835	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LGL87_06845	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LGL87_06850	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LGL87_06860	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LGL87_06865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LGL87_06870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LGL87_06875	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LGL87_06880	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LGL87_06885	COG0470	DNA polymerase III
LGL87_06890	COG0084	hydrolase, TatD family'
LGL87_06895	COG1263	PTS System
LGL87_06895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_06900	COG0537	adenosine 5'-monophosphoramidase activity
LGL87_06905	COG5633	Lipoprotein
LGL87_06910	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
LGL87_06925	COG3150	esterase
LGL87_06930	COG1252	NADH dehydrogenase
LGL87_06935	COG3134	Outer membrane lipoprotein
LGL87_06940	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LGL87_06945	COG4591	ABC-type transport system involved in lipoprotein release permease component
LGL87_06955	COG4591	ABC-type transport system involved in lipoprotein release permease component
LGL87_06975	COG2850	peptidyl-arginine hydroxylation
LGL87_06980	COG2205	protein histidine kinase activity
LGL87_06985	COG0745	RESPONSE REGULATOR receiver
LGL87_06995	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LGL87_07000	COG2915	High frequency lysogenization protein hflD homolog
LGL87_07005	COG0482	sulfurtransferase activity
LGL87_07015	COG1187	pseudouridine synthase activity
LGL87_07020	COG0538	isocitrate dehydrogenase activity
LGL87_07025	COG2771	luxR family
LGL87_07030	COG3916	Acyl-homoserine-lactone synthase
LGL87_07035	COG2723	6-phospho-beta-galactosidase activity
LGL87_07045	COG0339	signal peptide processing
LGL87_07050	COG0840	transmembrane signaling receptor activity
LGL87_07055	COG3493	citrate carrier protein
LGL87_07060	COG4565	transcriptional regulatory protein
LGL87_07065	COG3290	protein histidine kinase activity
LGL87_07070	COG0471	metal ion transport
LGL87_07115	COG4977	sequence-specific DNA binding
LGL87_07120	COG1702	phosphate starvation-inducible protein PhoH
LGL87_07125	COG0387	Pfam Sodium calcium exchanger
LGL87_07130	COG2375	cellular response to nickel ion
LGL87_07135	COG3850	Histidine kinase
LGL87_07145	COG1294	oxidase, subunit
LGL87_07150	COG1271	oxidase subunit
LGL87_07155	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LGL87_07160	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LGL87_07165	COG3138	arginine N-succinyltransferase
LGL87_07175	COG3724	N-succinylarginine dihydrolase activity
LGL87_07195	COG1228	amidohydrolase
LGL87_07205	COG0402	S-adenosylhomocysteine deaminase activity
LGL87_07225	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LGL87_07230	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LGL87_07235	COG3383	formate dehydrogenase (NAD+) activity
LGL87_07240	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL87_07245	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LGL87_07255	COG3260	NADH ubiquinone oxidoreductase 20
LGL87_07260	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_07265	COG3261	NADH dehydrogenase
LGL87_07265	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LGL87_07270	COG0650	Formate hydrogenlyase subunit 4
LGL87_07275	COG0651	ATP synthesis coupled electron transport
LGL87_07280	COG0651	ATP synthesis coupled electron transport
LGL87_07285	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL87_07295	COG0375	protein maturation
LGL87_07300	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LGL87_07305	COG0298	carbon dioxide binding
LGL87_07310	COG0409	Hydrogenase expression formation protein
LGL87_07315	COG0309	Hydrogenase expression formation protein (HypE)
LGL87_07355	COG2207	Transcriptional regulator
LGL87_07355	COG3708	Transcriptional regulator
LGL87_07360	COG0012	GTP binding
LGL87_07370	COG0193	aminoacyl-tRNA hydrolase activity
LGL87_07380	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LGL87_07390	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LGL87_07395	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LGL87_07400	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LGL87_07405	COG2890	protein-(glutamine-N5) methyltransferase activity
LGL87_07420	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LGL87_07425	COG0659	secondary active sulfate transmembrane transporter activity
LGL87_07430	COG3706	GGDEF domain
LGL87_07455	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LGL87_07465	COG3381	protein complex oligomerization
LGL87_07485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL87_07500	COG0728	peptidoglycan biosynthetic process
LGL87_07530	COG3102	Protein conserved in bacteria
LGL87_07535	COG3142	Participates in the control of copper homeostasis
LGL87_07550	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LGL87_07555	COG1801	Protein of unknown function DUF72
LGL87_07565	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LGL87_07570	COG0494	nUDIX hydrolase
LGL87_07580	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LGL87_07590	COG2255	four-way junction helicase activity
LGL87_07595	COG3104	oligopeptide transport
LGL87_07600	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL87_07605	COG1121	(ABC) transporter
LGL87_07610	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LGL87_07615	COG0739	heme binding
LGL87_07620	COG1560	Kdo2-lipid A biosynthetic process
LGL87_07625	COG0469	pyruvate kinase activity
LGL87_07630	COG1737	Transcriptional regulator
LGL87_07635	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LGL87_07640	COG0800	Aldolase
LGL87_07650	COG2076	Multidrug Resistance protein
LGL87_07655	COG0251	oxidation-reduction process
LGL87_07660	COG1199	ATP-dependent helicase activity
LGL87_07665	COG1214	PFAM Peptidase M22, glycoprotease
LGL87_07670	COG3065	identical protein binding
LGL87_07675	COG0318	PFAM AMP-dependent synthetase and ligase
LGL87_07680	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LGL87_07685	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LGL87_07690	COG2894	cell division
LGL87_07695	COG0850	regulation of cytokinetic process
LGL87_07700	COG3100	YcgL domain-containing protein
LGL87_07705	COG0179	Fumarylacetoacetate (FAA) hydrolase
LGL87_07710	COG2983	Belongs to the UPF0260 family
LGL87_07730	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LGL87_07740	COG2719	SpoVR family
LGL87_07745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LGL87_07750	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LGL87_07755	COG2814	Major facilitator Superfamily
LGL87_07765	COG2202	Pas domain
LGL87_07765	COG2199	diguanylate cyclase activity
LGL87_07765	COG2200	EAL domain
LGL87_07785	COG2718	Belongs to the UPF0229 family
LGL87_07790	COG2766	serine protein kinase
LGL87_07800	COG3713	MltA-interacting MipA family protein
LGL87_07805	COG2194	sulfuric ester hydrolase activity
LGL87_07820	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LGL87_07825	COG3139	Protein of unknown function (DUF1315)
LGL87_07830	COG1335	isochorismatase
LGL87_07835	COG0252	asparaginase activity
LGL87_07840	COG0616	signal peptide processing
LGL87_07845	COG0778	Nitroreductase
LGL87_07855	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LGL87_07865	COG0494	nUDIX hydrolase
LGL87_07870	COG0708	Exodeoxyribonuclease III
LGL87_07900	COG0788	formyltetrahydrofolate deformylase activity
LGL87_07905	COG3012	SEC-C Motif Domain Protein
LGL87_07915	COG1752	Esterase of the alpha-beta hydrolase superfamily
LGL87_07920	COG0745	RESPONSE REGULATOR receiver
LGL87_07940	COG1454	alcohol dehydrogenase
LGL87_07940	COG1012	belongs to the aldehyde dehydrogenase family
LGL87_07950	COG2095	MarC family integral membrane protein
LGL87_07955	COG4166	transmembrane transport
LGL87_07970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LGL87_07985	COG3099	Belongs to the UPF0263 family
LGL87_07990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LGL87_08010	COG2350	Protein conserved in bacteria
LGL87_08025	COG3710	Transcriptional regulator
LGL87_08060	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LGL87_08085	COG0727	PFAM Uncharacterised protein family (UPF0153)
LGL87_08090	COG3047	cAMP biosynthetic process
LGL87_08105	COG0133	tryptophan synthase activity
LGL87_08110	COG0134	indole-3-glycerol-phosphate synthase activity
LGL87_08110	COG0135	phosphoribosylanthranilate isomerase activity
LGL87_08120	COG0512	Glutamine amidotransferase of anthranilate synthase
LGL87_08130	COG0613	PHP domain protein
LGL87_08135	COG0009	L-threonylcarbamoyladenylate synthase
LGL87_08140	COG1187	pseudouridine synthase activity
LGL87_08155	COG0616	signal peptide processing
LGL87_08170	COG0583	DNA-binding transcription factor activity
LGL87_08185	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LGL87_08195	COG0671	phosphoesterase, PA-phosphatase related
LGL87_08200	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LGL87_08205	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LGL87_08225	COG0023	Translation Initiation Factor
LGL87_08235	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LGL87_08240	COG5001	Diguanylate cyclase
LGL87_08240	COG3447	MASE1 domain protein
LGL87_08240	COG5002	protein histidine kinase activity
LGL87_08245	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LGL87_08250	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LGL87_08260	COG4659	FMN binding
LGL87_08270	COG2207	Transcriptional regulator
LGL87_08270	COG3708	Transcriptional regulator
LGL87_08285	COG4657	Part of a membrane complex involved in electron transport
LGL87_08295	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LGL87_08305	COG0673	inositol 2-dehydrogenase activity
LGL87_08310	COG0385	Bile acid
LGL87_08315	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LGL87_08320	COG5339	Protein conserved in bacteria
LGL87_08325	COG1482	cell wall glycoprotein biosynthetic process
LGL87_08330	COG0114	fumarate hydratase activity
LGL87_08340	COG1940	carbohydrate kinase activity
LGL87_08345	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LGL87_08365	COG1742	UPF0060 membrane protein
LGL87_08370	COG4221	oxidoreductase activity
LGL87_08375	COG3023	N-Acetylmuramoyl-L-alanine amidase
LGL87_08395	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LGL87_08425	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LGL87_08445	COG1011	Hydrolase
LGL87_08455	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LGL87_08460	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LGL87_08465	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LGL87_08470	COG0589	response to stress
LGL87_08500	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LGL87_08505	COG3623	hexulose-6-phosphate isomerase
LGL87_08510	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LGL87_08515	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LGL87_08525	COG0531	amino acid
LGL87_08535	COG0745	RESPONSE REGULATOR receiver
LGL87_08540	COG2205	protein histidine kinase activity
LGL87_08555	COG2207	Transcriptional regulator
LGL87_08560	COG1881	PFAM PEBP family protein
LGL87_08570	COG3591	Belongs to the peptidase S1B family
LGL87_08575	COG1643	Atp-dependent helicase
LGL87_08580	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LGL87_08585	COG3784	Protein of unknown function (DUF1318)
LGL87_08600	COG2911	Protein conserved in bacteria
LGL87_08605	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LGL87_08610	COG3187	Heat shock protein
LGL87_08615	COG3042	response to heat
LGL87_08620	COG1285	pathogenesis
LGL87_08630	COG0674	pyruvate-flavodoxin oxidoreductase activity
LGL87_08630	COG1013	pyruvate-flavodoxin oxidoreductase activity
LGL87_08630	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LGL87_08630	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_08645	COG4166	transmembrane transport
LGL87_08650	COG2866	Carboxypeptidase
LGL87_08655	COG4948	Mandelate Racemase Muconate Lactonizing
LGL87_08660	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LGL87_08670	COG5642	Protein of unknown function (DUF2384)
LGL87_08675	COG5654	RES domain protein
LGL87_08680	COG3768	UPF0283 membrane protein
LGL87_08685	COG3106	COG3106 Predicted ATPase
LGL87_08695	COG1983	PspC domain protein
LGL87_08705	COG1842	Phage shock protein A
LGL87_08725	COG4166	transmembrane transport
LGL87_08735	COG4171	peptide transport system, permease
LGL87_08740	COG4172	Belongs to the ABC transporter superfamily
LGL87_08745	COG4172	Belongs to the ABC transporter superfamily
LGL87_08755	COG3104	oligopeptide transport
LGL87_08765	COG0484	heat shock protein binding
LGL87_08810	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LGL87_08815	COG3133	Outer membrane lipoprotein
LGL87_08830	COG4989	oxidoreductase activity
LGL87_08835	COG3313	Fe-S protein
LGL87_08840	COG2194	sulfuric ester hydrolase activity
LGL87_08845	COG1309	transcriptional regulator
LGL87_08850	COG1902	pentaerythritol trinitrate reductase activity
LGL87_08865	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LGL87_08870	COG0791	NLP P60 protein
LGL87_08875	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LGL87_08885	COG1609	Transcriptional regulator
LGL87_08890	COG0583	DNA-binding transcription factor activity
LGL87_08895	COG2814	Major facilitator Superfamily
LGL87_08900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LGL87_08905	COG0307	riboflavin synthase, alpha
LGL87_08940	COG1376	ErfK ybiS ycfS ynhG family protein
LGL87_08940	COG1388	LysM domain
LGL87_08945	COG2166	iron-sulfur cluster assembly
LGL87_08955	COG0719	Fe-S assembly protein
LGL87_08960	COG0396	ATPase activity
LGL87_08965	COG0719	Fe-S assembly protein
LGL87_08970	COG0316	Belongs to the HesB IscA family
LGL87_08975	COG2050	protein possibly involved in aromatic compounds catabolism
LGL87_08980	COG0277	FAD linked oxidase domain protein
LGL87_08980	COG0247	lactate metabolic process
LGL87_08985	COG0628	permease
LGL87_08995	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LGL87_08995	COG0574	Belongs to the PEP-utilizing enzyme family
LGL87_09000	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LGL87_09005	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL87_09015	COG4771	TonB-dependent receptor
LGL87_09020	COG3720	iron ion transport
LGL87_09025	COG4558	Periplasmic binding protein
LGL87_09030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL87_09035	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LGL87_09045	COG0095	Lipoate-protein ligase
LGL87_09050	COG0791	NLP P60 protein
LGL87_09055	COG2076	Multidrug Resistance protein
LGL87_09060	COG2076	Multidrug Resistance protein
LGL87_09065	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LGL87_09085	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LGL87_09095	COG4139	cobalamin transport
LGL87_09140	COG0776	regulation of translation
LGL87_09215	COG0803	Belongs to the bacterial solute-binding protein 9 family
LGL87_09220	COG1121	(ABC) transporter
LGL87_09225	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL87_09230	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL87_09235	COG3001	Fructosamine kinase
LGL87_09245	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LGL87_09250	COG1988	membrane-bound metal-dependent
LGL87_09255	COG1823	symporter activity
LGL87_09260	COG3023	N-Acetylmuramoyl-L-alanine amidase
LGL87_09270	COG2814	Major facilitator Superfamily
LGL87_09280	COG0501	Belongs to the peptidase M48B family
LGL87_09285	COG0793	Belongs to the peptidase S41A family
LGL87_09295	COG1956	GAF domain-containing protein
LGL87_09300	COG2995	paraquat-inducible protein a
LGL87_09305	COG3008	intermembrane lipid transfer
LGL87_09310	COG4251	negative regulation of phosphorylation
LGL87_09310	COG2203	Gaf domain
LGL87_09310	COG5001	Diguanylate cyclase
LGL87_09310	COG3706	GGDEF domain
LGL87_09390	COG1276	copper resistance
LGL87_09395	COG2372	response to copper ion
LGL87_09400	COG1528	Iron-storage protein
LGL87_09415	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LGL87_09420	COG1770	oligopeptidase
LGL87_09430	COG3097	Belongs to the UPF0267 family
LGL87_09435	COG3141	response to X-ray
LGL87_09440	COG0513	Belongs to the DEAD box helicase family
LGL87_09460	COG0494	nUDIX hydrolase
LGL87_09465	COG1760	l-serine dehydratase
LGL87_09470	COG1253	flavin adenine dinucleotide binding
LGL87_09475	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL87_09475	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_09480	COG3715	PTS system
LGL87_09485	COG3716	PTS system mannose fructose sorbose family IID component
LGL87_09490	COG4811	Protein of unknown function (DUF986)
LGL87_09495	COG1971	Probably functions as a manganese efflux pump
LGL87_09515	COG1960	acyl-CoA dehydrogenase activity
LGL87_09525	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LGL87_09555	COG2226	methyltransferase
LGL87_09560	COG0768	penicillin binding
LGL87_09565	COG1496	oxidoreductase activity
LGL87_09585	COG1113	amino acid transport
LGL87_09620	COG2207	Transcriptional regulator
LGL87_09640	COG1132	(ABC) transporter
LGL87_09650	COG5001	Diguanylate cyclase
LGL87_09650	COG4251	negative regulation of phosphorylation
LGL87_09650	COG3706	GGDEF domain
LGL87_09650	COG2203	Gaf domain
LGL87_09670	COG1181	Belongs to the D-alanine--D-alanine ligase family
LGL87_09690	COG1278	Cold shock
LGL87_09695	COG1278	Cold shock
LGL87_09710	COG2169	Transcriptional regulator
LGL87_09710	COG1917	Cupin 2, conserved barrel domain protein
LGL87_09715	COG1447	Phosphotransferase system cellobiose-specific component IIA
LGL87_09720	COG2723	6-phospho-beta-galactosidase activity
LGL87_09725	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LGL87_09730	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LGL87_09735	COG1187	pseudouridine synthase activity
LGL87_09745	COG3122	Protein conserved in bacteria
LGL87_09750	COG1757	Na H antiporter
LGL87_09765	COG2235	arginine
LGL87_09780	COG0076	glutamate decarboxylase activity
LGL87_09785	COG0531	amino acid
LGL87_09820	COG2153	protein acetylation
LGL87_09825	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LGL87_09855	COG0840	transmembrane signaling receptor activity
LGL87_09860	COG2801	Transposase and inactivated derivatives
LGL87_10005	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LGL87_10020	COG5301	cellulose 1,4-beta-cellobiosidase activity
LGL87_10035	COG3299	homolog of phage Mu protein gp47
LGL87_10085	COG4386	tail sheath protein
LGL87_10270	COG3179	chitinase
LGL87_10405	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LGL87_10410	COG0322	excinuclease ABC activity
LGL87_10415	COG2197	response regulator
LGL87_10440	COG1113	amino acid transport
LGL87_10450	COG0531	amino acid
LGL87_10455	COG3710	Transcriptional regulator
LGL87_10460	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LGL87_10465	COG0506	proline dehydrogenase activity
LGL87_10465	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LGL87_10465	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LGL87_10470	COG1126	abc transporter atp-binding protein
LGL87_10475	COG0765	amino acid transport
LGL87_10480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_10485	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LGL87_10495	COG1191	sigma factor activity
LGL87_10530	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LGL87_10535	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LGL87_10550	COG1677	Flagellar hook-basal body complex protein FliE
LGL87_10560	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LGL87_10565	COG1317	bacterial-type flagellum organization
LGL87_10570	COG1157	protein secretion by the type III secretion system
LGL87_10585	COG1580	Controls the rotational direction of flagella during chemotaxis
LGL87_10665	COG1558	bacterial-type flagellum-dependent cell motility
LGL87_10670	COG1815	bacterial-type flagellum-dependent cell motility
LGL87_10680	COG2747	anti-sigma28 factor FlgM
LGL87_10685	COG3418	PFAM FlgN family protein
LGL87_10695	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LGL87_10700	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LGL87_10705	COG4935	Belongs to the peptidase S8 family
LGL87_10705	COG1404	Belongs to the peptidase S8 family
LGL87_10710	COG2197	response regulator
LGL87_10725	COG3188	usher protein
LGL87_10735	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LGL87_10740	COG0745	RESPONSE REGULATOR receiver
LGL87_10750	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LGL87_10755	COG0840	transmembrane signaling receptor activity
LGL87_10760	COG0840	transmembrane signaling receptor activity
LGL87_10770	COG0835	chemotaxis
LGL87_10775	COG2198	Histidine kinase
LGL87_10775	COG0643	Histidine kinase
LGL87_10780	COG1360	Flagellar Motor Protein
LGL87_10800	COG0589	response to stress
LGL87_10805	COG1285	pathogenesis
LGL87_10810	COG0840	transmembrane signaling receptor activity
LGL87_10830	COG1609	Transcriptional regulator
LGL87_10840	COG0604	alcohol dehydrogenase
LGL87_10840	COG1028	Short-chain dehydrogenase reductase Sdr
LGL87_10840	COG3321	synthase
LGL87_10890	COG0471	metal ion transport
LGL87_10905	COG3051	citrate lyase alpha subunit
LGL87_10910	COG2301	Belongs to the HpcH HpaI aldolase family
LGL87_10915	COG3052	prosthetic group binding
LGL87_10920	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LGL87_10925	COG3290	protein histidine kinase activity
LGL87_10930	COG4565	transcriptional regulatory protein
LGL87_10945	COG2271	Major facilitator Superfamily
LGL87_10950	COG1840	ABC-type Fe3 transport system, periplasmic component
LGL87_10960	COG3842	ATPase activity
LGL87_10975	COG0582	viral genome integration into host DNA
LGL87_10990	COG3423	Transcriptional regulator
LGL87_11025	COG3451	type IV secretory pathway VirB4
LGL87_11045	COG3736	Type IV secretory pathway, component VirB8
LGL87_11060	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
LGL87_11075	COG4227	nucleotidyltransferase activity
LGL87_11125	COG1289	transmembrane transporter activity
LGL87_11135	COG2925	Exonuclease
LGL87_11140	COG0531	amino acid
LGL87_11145	COG4771	TonB-dependent receptor
LGL87_11155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL87_11165	COG0833	amino acid
LGL87_11170	COG0583	DNA-binding transcription factor activity
LGL87_11180	COG2855	membrane
LGL87_11185	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LGL87_11190	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LGL87_11190	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LGL87_11190	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LGL87_11195	COG1105	Belongs to the carbohydrate kinase PfkB family
LGL87_11210	COG3005	denitrification pathway
LGL87_11215	COG0243	molybdopterin cofactor binding
LGL87_11235	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LGL87_11245	COG0246	Mannitol dehydrogenase
LGL87_11255	COG0523	cobalamin synthesis protein
LGL87_11260	COG0671	phosphoesterase, PA-phosphatase related
LGL87_11265	COG0791	NLP P60 protein
LGL87_11270	COG2200	EAL domain
LGL87_11275	COG4166	transmembrane transport
LGL87_11280	COG4174	ABC transporter (Permease)
LGL87_11285	COG4239	(ABC) transporter, permease
LGL87_11290	COG4172	Belongs to the ABC transporter superfamily
LGL87_11300	COG2814	Major facilitator Superfamily
LGL87_11305	COG1187	pseudouridine synthase activity
LGL87_11310	COG1061	Type III restriction enzyme res subunit
LGL87_11325	COG3082	Protein of unknown function (DUF1414)
LGL87_11330	COG3083	sulfuric ester hydrolase activity
LGL87_11370	COG3299	homolog of phage Mu protein gp47
LGL87_11420	COG4386	tail sheath protein
LGL87_11460	COG0616	signal peptide processing
LGL87_11495	COG3646	Phage regulatory protein
LGL87_11505	COG0675	Transposase, IS605 OrfB family
LGL87_11540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LGL87_11545	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL87_11565	COG2223	nitrite transmembrane transporter activity
LGL87_11570	COG2198	Histidine kinase
LGL87_11570	COG0642	Histidine kinase
LGL87_11580	COG2205	protein histidine kinase activity
LGL87_11580	COG0784	Response regulator, receiver
LGL87_11590	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LGL87_11595	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LGL87_11605	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL87_11615	COG4574	serine-type endopeptidase inhibitor activity
LGL87_11625	COG2246	polysaccharide biosynthetic process
LGL87_11640	COG0814	amino acid
LGL87_11665	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LGL87_11670	COG0596	Alpha beta hydrolase
LGL87_11675	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LGL87_11680	COG1169	isochorismate synthase
LGL87_11685	COG4575	ribosome binding
LGL87_11700	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_11705	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LGL87_11715	COG0839	Belongs to the complex I subunit 6 family
LGL87_11720	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_11725	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LGL87_11730	COG1034	ATP synthesis coupled electron transport
LGL87_11750	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_11755	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL87_11760	COG0583	DNA-binding transcription factor activity
LGL87_11765	COG0436	Aminotransferase
LGL87_11770	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LGL87_11775	COG0490	domain, Protein
LGL87_11775	COG0471	metal ion transport
LGL87_11785	COG3013	Belongs to the UPF0304 family
LGL87_11790	COG3092	negative regulation of chromosome organization
LGL87_11800	COG0280	phosphate acetyltransferase
LGL87_11800	COG0857	belongs to the CobB CobQ family
LGL87_11805	COG1609	Transcriptional regulator
LGL87_11820	COG3037	sugar-specific permease SgaT UlaA
LGL87_11825	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LGL87_11830	COG0622	Phosphoesterase
LGL87_11840	COG0625	glutathione transferase activity
LGL87_11845	COG1090	epimerase
LGL87_11855	COG4160	amino acid transport
LGL87_11860	COG4215	(ABC) transporter
LGL87_11875	COG0163	prenyltransferase activity
LGL87_11880	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LGL87_11885	COG1286	toxin biosynthetic process
LGL87_11890	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LGL87_11895	COG0285	dihydrofolate synthase activity
LGL87_11905	COG0586	Pfam SNARE associated Golgi protein
LGL87_11915	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LGL87_11940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LGL87_11945	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LGL87_11975	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LGL87_11990	COG3101	peptidyl-lysine hydroxylation
LGL87_11995	COG0730	response to heat
LGL87_12000	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LGL87_12010	COG2890	protein-(glutamine-N5) methyltransferase activity
LGL87_12015	COG2840	Smr protein MutS2
LGL87_12020	COG2062	phosphohistidine phosphatase, SixA
LGL87_12025	COG1024	Enoyl-CoA hydratase
LGL87_12025	COG1250	3-hydroxyacyl-CoA dehydrogenase
LGL87_12030	COG0183	Belongs to the thiolase family
LGL87_12035	COG3691	Protein conserved in bacteria
LGL87_12050	COG4235	cytochrome complex assembly
LGL87_12050	COG3088	subunit of a heme lyase
LGL87_12055	COG4235	cytochrome complex assembly
LGL87_12055	COG3088	subunit of a heme lyase
LGL87_12060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LGL87_12065	COG1138	Cytochrome C-type biogenesis protein
LGL87_12070	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LGL87_12075	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL87_12080	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL87_12085	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL87_12105	COG2824	Alkylphosphonate utilization operon protein PhnA
LGL87_12110	COG2951	lytic endotransglycosylase activity
LGL87_12115	COG1598	PFAM Uncharacterised protein family UPF0150
LGL87_12125	COG3038	cytochrome b561
LGL87_12130	COG0436	Aminotransferase
LGL87_12140	COG3275	phosphorelay sensor kinase activity
LGL87_12145	COG3279	Response regulator of the LytR AlgR family
LGL87_12150	COG2223	nitrite transmembrane transporter activity
LGL87_12155	COG0837	glucose binding
LGL87_12175	COG1914	H( )-stimulated, divalent metal cation uptake system
LGL87_12180	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LGL87_12240	COG3530	Putative quorum-sensing-regulated virulence factor
LGL87_12245	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LGL87_12255	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LGL87_12265	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL87_12280	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LGL87_12290	COG4208	sulfate ABC transporter
LGL87_12295	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LGL87_12300	COG4150	thiosulfate binding
LGL87_12310	COG1737	Transcriptional regulator
LGL87_12315	COG2731	YhcH YjgK YiaL family protein
LGL87_12330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LGL87_12335	COG2837	iron assimilation
LGL87_12345	COG3111	PFAM Bacterial OB fold (BOF) protein
LGL87_12450	COG1671	Belongs to the UPF0178 family
LGL87_12455	COG0280	phosphate acetyltransferase
LGL87_12455	COG0281	malic enzyme
LGL87_12460	COG0494	nUDIX hydrolase
LGL87_12465	COG3005	denitrification pathway
LGL87_12470	COG3043	anaerobic respiration
LGL87_12475	COG0243	molybdopterin cofactor binding
LGL87_12480	COG3062	negative regulation of establishment of protein localization
LGL87_12485	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL87_12485	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL87_12490	COG2197	response regulator
LGL87_12500	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL87_12510	COG1605	Chorismate mutase
LGL87_12515	COG1393	Belongs to the ArsC family
LGL87_12520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LGL87_12525	COG1876	peptidase activity
LGL87_12535	COG0400	carboxylic ester hydrolase activity
LGL87_12555	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LGL87_12560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LGL87_12565	COG2716	regulation of RNA biosynthetic process
LGL87_12570	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LGL87_12575	COG0628	permease
LGL87_12580	COG4783	chaperone-mediated protein folding
LGL87_12585	COG1393	Belongs to the ArsC family
LGL87_12590	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LGL87_12595	COG2233	PERMEase
LGL87_12600	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LGL87_12605	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LGL87_12610	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LGL87_12615	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL87_12625	COG0581	inorganic phosphate transmembrane transporter activity
LGL87_12630	COG0573	inorganic phosphate transmembrane transporter activity
LGL87_12635	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LGL87_12650	COG2239	Acts as a magnesium transporter
LGL87_12655	COG0443	Heat shock 70 kDa protein
LGL87_12665	COG3121	Chaperone
LGL87_12680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL87_12690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL87_12695	COG0477	Major facilitator Superfamily
LGL87_12700	COG2205	protein histidine kinase activity
LGL87_12705	COG0745	RESPONSE REGULATOR receiver
LGL87_12710	COG3422	double-strand break repair
LGL87_12715	COG0826	peptidase U32
LGL87_12720	COG1597	lipid kinase activity
LGL87_12735	COG0351	phosphomethylpyrimidine kinase
LGL87_12745	COG0519	Catalyzes the synthesis of GMP from XMP
LGL87_12745	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LGL87_12750	COG0517	IMP dehydrogenase activity
LGL87_12750	COG0516	GMP reductase activity
LGL87_12755	COG1570	exodeoxyribonuclease VII activity
LGL87_12760	COG1645	bacterial-type flagellum-dependent swarming motility
LGL87_12770	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL87_12775	COG2976	Protein conserved in bacteria
LGL87_12780	COG0124	histidyl-tRNA synthetase
LGL87_12800	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LGL87_12815	COG4953	penicillin-binding protein 1C
LGL87_12820	COG2373	Large extracellular alpha-helical protein
LGL87_12835	COG2975	iron-sulfur cluster assembly
LGL87_12840	COG0633	Ferredoxin
LGL87_12845	COG0443	Heat shock 70 kDa protein
LGL87_12860	COG0822	iron-sulfur transferase activity
LGL87_12870	COG1959	2 iron, 2 sulfur cluster binding
LGL87_12875	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LGL87_12885	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LGL87_12890	COG3683	transport system, periplasmic component
LGL87_12895	COG3711	transcriptional antiterminator
LGL87_12900	COG2814	Major facilitator Superfamily
LGL87_12910	COG1017	nitric oxide dioxygenase activity
LGL87_12910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL87_12915	COG2188	Transcriptional regulator
LGL87_12925	COG3457	Alanine racemase
LGL87_12930	COG1735	metal-dependent hydrolase with the TIM-barrel fold
LGL87_12945	COG0347	Belongs to the P(II) protein family
LGL87_12950	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LGL87_12950	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL87_12955	COG2204	response regulator
LGL87_12960	COG3170	Tfp pilus assembly protein FimV
LGL87_12965	COG2205	protein histidine kinase activity
LGL87_12980	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LGL87_12990	COG0560	Phosphoserine phosphatase
LGL87_12995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_12995	COG1263	PTS System
LGL87_13005	COG1737	Transcriptional regulator
LGL87_13010	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL87_13020	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LGL87_13030	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LGL87_13045	COG0481	GTPase activity
LGL87_13050	COG3086	response to oxidative stress
LGL87_13060	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LGL87_13070	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LGL87_13080	COG0513	Belongs to the DEAD box helicase family
LGL87_13095	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LGL87_13105	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LGL87_13110	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LGL87_13115	COG0497	DNA recombination
LGL87_13120	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL87_13130	COG2867	negative regulation of translational initiation
LGL87_13135	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LGL87_13165	COG2963	transposase activity
LGL87_13175	COG1069	ribulokinase activity
LGL87_13185	COG1172	Belongs to the binding-protein-dependent transport system permease family
LGL87_13190	COG1129	ABC transporter
LGL87_13215	COG1620	l-lactate permease
LGL87_13220	COG1304	FMN binding
LGL87_13225	COG0579	oxidoreductase
LGL87_13230	COG1278	Cold shock
LGL87_13260	COG1780	Probably involved in ribonucleotide reductase function
LGL87_13265	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LGL87_13275	COG4175	Glycine betaine
LGL87_13280	COG4176	ABC-type proline glycine betaine transport system permease component
LGL87_13285	COG2113	Glycine betaine
LGL87_13300	COG1846	Transcriptional regulator
LGL87_13310	COG1566	PFAM secretion protein HlyD family protein
LGL87_13315	COG2814	Major facilitator Superfamily
LGL87_13320	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL87_13325	COG3118	belongs to the thioredoxin family
LGL87_13330	COG3148	PFAM DTW domain containing protein
LGL87_13335	COG1042	CoA-binding domain protein
LGL87_13335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL87_13335	COG0045	succinate-CoA ligase (ADP-forming) activity
LGL87_13340	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LGL87_13345	COG5544	Lipoprotein
LGL87_13370	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LGL87_13380	COG2011	ABC-type metal ion transport system permease component
LGL87_13385	COG1464	Belongs to the NlpA lipoprotein family
LGL87_13395	COG1720	tRNA m6t6A37 methyltransferase activity
LGL87_13400	COG0442	prolyl-tRNA aminoacylation
LGL87_13405	COG3015	lipoprotein NlpE involved in copper resistance
LGL87_13415	COG4681	YaeQ
LGL87_13425	COG4568	rho-dependent transcription termination
LGL87_13440	COG0346	lactoylglutathione lyase activity
LGL87_13455	COG0825	malonyl-CoA metabolic process
LGL87_13460	COG0587	DNA-directed DNA polymerase activity
LGL87_13465	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LGL87_13485	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LGL87_13490	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
LGL87_13500	COG0750	zinc metalloprotease
LGL87_13505	COG0575	Belongs to the CDS family
LGL87_13525	COG0528	UMP kinase activity
LGL87_13530	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LGL87_13550	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LGL87_13555	COG2171	N-acyltransferase activity
LGL87_13570	COG0564	pseudouridine synthase activity
LGL87_13575	COG3098	single-species biofilm formation
LGL87_13590	COG1611	Belongs to the LOG family
LGL87_13600	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LGL87_13605	COG2363	Small membrane protein
LGL87_13610	COG0583	DNA-binding transcription factor activity
LGL87_13620	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LGL87_13625	COG2166	iron-sulfur cluster assembly
LGL87_13630	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LGL87_13635	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LGL87_13655	COG0860	N-Acetylmuramoyl-L-alanine amidase
LGL87_13660	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LGL87_13660	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LGL87_13665	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LGL87_13670	COG1074	ATP-dependent DNA helicase activity
LGL87_13675	COG1025	Belongs to the peptidase M16 family
LGL87_13680	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LGL87_13685	COG4967	type IV pilus modification protein PilV
LGL87_13710	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LGL87_13715	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
LGL87_13725	COG3066	DNA modification
LGL87_13730	COG0861	Integral membrane protein TerC family
LGL87_13735	COG0667	Aldo Keto reductase
LGL87_13740	COG0477	Major facilitator Superfamily
LGL87_13745	COG0204	Acyl-transferase
LGL87_13745	COG0318	PFAM AMP-dependent synthetase and ligase
LGL87_13755	COG1609	Transcriptional regulator
LGL87_13765	COG0583	DNA-binding transcription factor activity
LGL87_13770	COG0583	DNA-binding transcription factor activity
LGL87_13815	COG4795	General secretion pathway protein
LGL87_13835	COG2165	general secretion pathway protein
LGL87_13850	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL87_13880	COG1127	ABC transporter
LGL87_13885	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LGL87_13930	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LGL87_13940	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LGL87_13945	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LGL87_13950	COG4974	Belongs to the 'phage' integrase family
LGL87_13955	COG0716	FMN binding
LGL87_13965	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LGL87_13975	COG1272	protein, Hemolysin III
LGL87_13995	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LGL87_14000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL87_14005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL87_14010	COG0006	proline dipeptidase activity
LGL87_14020	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LGL87_14030	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LGL87_14035	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LGL87_14040	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LGL87_14055	COG1279	arginine transmembrane transporter activity
LGL87_14065	COG0191	fructose-bisphosphate aldolase activity
LGL87_14070	COG0126	phosphoglycerate kinase activity
LGL87_14075	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LGL87_14080	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LGL87_14090	COG1166	arginine decarboxylase activity
LGL87_14095	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LGL87_14110	COG0640	Transcriptional regulator
LGL87_14115	COG3091	SprT-like family
LGL87_14120	COG2356	endonuclease I
LGL87_14125	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LGL87_14130	COG0189	ligase activity
LGL87_14135	COG1678	Uncharacterized ACR, COG1678
LGL87_14140	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LGL87_14145	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL87_14155	COG2805	Type II/IV secretion system protein
LGL87_14160	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LGL87_14165	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LGL87_14170	COG0762	integral membrane protein
LGL87_14175	COG1872	DUF167
LGL87_14180	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LGL87_14185	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LGL87_14200	COG3171	Protein conserved in bacteria
LGL87_14210	COG1194	a g-specific adenine glycosylase
LGL87_14215	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LGL87_14220	COG0741	lytic transglycosylase activity
LGL87_14230	COG0582	viral genome integration into host DNA
LGL87_14255	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LGL87_14310	COG3596	GTP binding
LGL87_14395	COG1105	Belongs to the carbohydrate kinase PfkB family
LGL87_14400	COG1882	Formate acetyltransferase
LGL87_14405	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LGL87_14410	COG0814	amino acid
LGL87_14425	COG1028	Short-chain dehydrogenase reductase Sdr
LGL87_14430	COG3433	isochorismatase activity
LGL87_14430	COG1535	isochorismatase
LGL87_14435	COG1021	2,3-dihydroxybenzoate-AMP ligase
LGL87_14440	COG1169	isochorismate synthase
LGL87_14445	COG4592	Periplasmic binding protein
LGL87_14455	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL87_14460	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL87_14465	COG1120	ATPase activity
LGL87_14475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LGL87_14480	COG3251	PFAM MbtH domain protein
LGL87_14490	COG4774	siderophore transport
LGL87_14495	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LGL87_14515	COG4964	Belongs to the GSP D family
LGL87_14565	COG0848	biopolymer transport protein
LGL87_14570	COG0811	peptide transport
LGL87_14575	COG0626	cystathionine gamma-synthase activity
LGL87_14580	COG0586	Pfam SNARE associated Golgi protein
LGL87_14585	COG2207	Transcriptional regulator
LGL87_14590	COG1979	alcohol dehydrogenase
LGL87_14595	COG0656	L-ascorbic acid biosynthetic process
LGL87_14605	COG2132	Multicopper oxidase
LGL87_14615	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LGL87_14620	COG2249	NAD(P)H dehydrogenase (quinone) activity
LGL87_14625	COG0583	DNA-binding transcription factor activity
LGL87_14630	COG0187	DNA topoisomerase II activity
LGL87_14635	COG3150	esterase
LGL87_14640	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LGL87_14645	COG3151	Protein conserved in bacteria
LGL87_14650	COG0494	nUDIX hydrolase
LGL87_14655	COG1538	Outer membrane efflux protein
LGL87_14660	COG5463	Belongs to the UPF0441 family
LGL87_14665	COG0754	glutathionylspermidine amidase activity
LGL87_14670	COG3384	dioxygenase
LGL87_14675	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LGL87_14685	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LGL87_14685	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LGL87_14695	COG3025	triphosphatase activity
LGL87_14700	COG4991	sh3 domain protein
LGL87_14705	COG0617	tRNA 3'-terminal CCA addition
LGL87_14710	COG1968	undecaprenyl-diphosphatase activity
LGL87_14715	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LGL87_14720	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LGL87_14725	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LGL87_14730	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LGL87_14735	COG0358	DNA primase activity
LGL87_14765	COG1028	Short-chain dehydrogenase reductase Sdr
LGL87_14800	COG0463	Glycosyl transferase, family 2
LGL87_14865	COG3210	domain, Protein
LGL87_14870	COG2831	hemolysin activation secretion protein
LGL87_14875	COG1902	pentaerythritol trinitrate reductase activity
LGL87_14875	COG0446	pyridine nucleotide-disulphide oxidoreductase
LGL87_14890	COG1451	nucleotide metabolic process
LGL87_14895	COG0673	inositol 2-dehydrogenase activity
LGL87_14900	COG0861	Integral membrane protein TerC family
LGL87_14905	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LGL87_14915	COG2721	sulfolactate sulfo-lyase activity
LGL87_14930	COG2271	Major facilitator Superfamily
LGL87_14945	COG0586	Pfam SNARE associated Golgi protein
LGL87_14960	COG4575	ribosome binding
LGL87_14965	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
LGL87_14975	COG2259	Doxx family
LGL87_14980	COG0583	DNA-binding transcription factor activity
LGL87_14985	COG1741	Belongs to the pirin family
LGL87_15000	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LGL87_15015	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LGL87_15020	COG2823	Periplasmic or secreted lipoprotein
LGL87_15025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LGL87_15030	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LGL87_15035	COG5002	protein histidine kinase activity
LGL87_15035	COG2198	Histidine kinase
LGL87_15035	COG0784	Response regulator, receiver
LGL87_15045	COG1242	4 iron, 4 sulfur cluster binding
LGL87_15050	COG0070	glutamate synthase
LGL87_15050	COG0069	glutamate synthase activity
LGL87_15050	COG0067	glutamate synthase
LGL87_15055	COG0493	'glutamate synthase
LGL87_15065	COG2969	positive regulation of protein catabolic process
LGL87_15070	COG0625	glutathione transferase activity
LGL87_15075	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LGL87_15080	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LGL87_15085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LGL87_15090	COG3105	Protein conserved in bacteria
LGL87_15095	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LGL87_15105	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LGL87_15110	COG5007	Belongs to the BolA IbaG family
LGL87_15115	COG3113	response to antibiotic
LGL87_15120	COG2854	intermembrane phospholipid transfer
LGL87_15125	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LGL87_15130	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LGL87_15135	COG1127	ABC transporter
LGL87_15140	COG0530	calcium, potassium:sodium antiporter activity
LGL87_15145	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LGL87_15145	COG0517	IMP dehydrogenase activity
LGL87_15150	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LGL87_15155	COG3117	lipopolysaccharide transmembrane transporter activity
LGL87_15160	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LGL87_15165	COG1137	ATPase activity
LGL87_15170	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LGL87_15190	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL87_15195	COG0540	Belongs to the ATCase OTCase family
LGL87_15200	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LGL87_15210	COG0366	Alpha amylase catalytic
LGL87_15215	COG1263	PTS System
LGL87_15215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL87_15225	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LGL87_15235	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LGL87_15240	COG3783	Cytochrome b(562)
LGL87_15245	COG0312	modulator of DNA gyrase
LGL87_15250	COG3028	Belongs to the UPF0307 family
LGL87_15255	COG2732	(Barnase) inhibitor
LGL87_15260	COG4290	ribonuclease
LGL87_15270	COG1289	transmembrane transporter activity
LGL87_15275	COG1566	PFAM secretion protein HlyD family protein
LGL87_15285	COG0583	DNA-binding transcription factor activity
LGL87_15290	COG0312	modulator of DNA gyrase
LGL87_15295	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL87_15300	COG3164	Protein of unknown function
LGL87_15310	COG0424	maF-like protein
LGL87_15315	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LGL87_15320	COG1792	Involved in formation and maintenance of cell shape
LGL87_15325	COG1077	Cell shape determining protein MreB Mrl
LGL87_15330	COG2200	EAL domain
LGL87_15330	COG2199	diguanylate cyclase activity
LGL87_15335	COG0604	alcohol dehydrogenase
LGL87_15340	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LGL87_15345	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LGL87_15355	COG0511	ligase activity, forming carbon-carbon bonds
LGL87_15360	COG0439	Biotin carboxylase
LGL87_15365	COG3924	membrane
LGL87_15370	COG4145	pantothenate transmembrane transporter activity
LGL87_15375	COG2264	protein methyltransferase activity
LGL87_15380	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL87_15385	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LGL87_15395	COG1560	Kdo2-lipid A biosynthetic process
LGL87_15405	COG1346	cytolysis
LGL87_15410	COG1380	Effector of murein hydrolase LrgA
LGL87_15415	COG0583	DNA-binding transcription factor activity
LGL87_15420	COG0025	NhaP-type Na H and K H
LGL87_15425	COG2252	PERMEase
LGL87_15440	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LGL87_15445	COG2315	Protein conserved in bacteria
LGL87_15450	COG1448	Aminotransferase
LGL87_15465	COG0604	alcohol dehydrogenase
LGL87_15475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL87_15480	COG0735	belongs to the Fur family
LGL87_15485	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LGL87_15490	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LGL87_15495	COG2937	Belongs to the GPAT DAPAT family
LGL87_15515	COG4580	involved in the transport of maltose and maltodextrins
LGL87_15530	COG2182	Extracellular solute-binding protein
LGL87_15535	COG1175	transmembrane transport
LGL87_15540	COG3833	ABC-type maltose transport systems, permease component
LGL87_15545	COG3223	Belongs to the PsiE family
LGL87_15555	COG0527	aspartate kinase activity
LGL87_15570	COG3328	transposase activity
LGL87_15605	COG1222	aaa ATPase
LGL87_15690	COG0583	DNA-binding transcription factor activity
LGL87_15725	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LGL87_15765	COG0138	bifunctional purine biosynthesis protein purh
LGL87_15770	COG0151	Belongs to the GarS family
LGL87_15790	COG1515	deoxyribonuclease V activity
LGL87_15795	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LGL87_15800	COG2816	NAD+ diphosphatase activity
LGL87_15805	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LGL87_15820	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LGL87_15825	COG2104	thiamine diphosphate biosynthetic process
LGL87_15830	COG2022	thiamine diphosphate biosynthetic process
LGL87_15840	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LGL87_15845	COG0085	RNA polymerase activity
LGL87_15850	COG0222	ribosome binding
LGL87_15855	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LGL87_15865	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LGL87_15870	COG0250	Participates in transcription elongation, termination and antitermination
LGL87_15915	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LGL87_15940	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LGL87_15945	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LGL87_15950	COG1739	Uncharacterized protein family UPF0029
LGL87_15960	COG1024	Enoyl-CoA hydratase
LGL87_15960	COG1250	3-hydroxyacyl-CoA dehydrogenase
LGL87_15970	COG0543	2 iron, 2 sulfur cluster binding
LGL87_15985	COG0250	Participates in transcription elongation, termination and antitermination
LGL87_16000	COG0805	protein transport
LGL87_16005	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LGL87_16010	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LGL87_16015	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LGL87_16020	COG3165	ubiquinone biosynthetic process from chorismate
LGL87_16025	COG2226	methyltransferase
LGL87_16030	COG1322	Protein conserved in bacteria
LGL87_16035	COG0586	Pfam SNARE associated Golgi protein
LGL87_16040	COG1966	Carbon starvation protein
LGL87_16055	COG0412	Dienelactone hydrolase
LGL87_16060	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LGL87_16065	COG0583	DNA-binding transcription factor activity
LGL87_16070	COG0697	spore germination
LGL87_16080	COG0584	glycerophosphoryl diester phosphodiesterase
LGL87_16090	COG0395	ABC-type sugar transport system, permease component
LGL87_16095	COG1175	transmembrane transport
LGL87_16100	COG1653	transport
LGL87_16135	COG0410	ABC transporter
LGL87_16145	COG4177	L-phenylalanine transmembrane transporter activity
LGL87_16165	COG1929	Belongs to the glycerate kinase type-1 family
LGL87_16170	COG2610	gluconate transmembrane transporter activity
LGL87_16175	COG3835	regulator
LGL87_16185	COG2177	Part of the ABC transporter FtsEX involved in
LGL87_16190	COG2884	Cell division ATP-binding protein ftsE
LGL87_16195	COG0552	protein localization to endoplasmic reticulum
LGL87_16195	COG0552	protein localization to endoplasmic reticulum
LGL87_16200	COG0742	ribosomal rna small subunit methyltransferase
LGL87_16205	COG3776	membrane
LGL87_16220	COG3714	YhhN family
LGL87_16235	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LGL87_16245	COG0247	lactate metabolic process
LGL87_16255	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LGL87_16265	COG2271	Major facilitator Superfamily
LGL87_16270	COG0584	glycerophosphoryl diester phosphodiesterase
LGL87_16275	COG0561	phosphatase activity
LGL87_16280	COG2267	carboxylic ester hydrolase activity
LGL87_16285	COG1280	lysine exporter protein (LysE YggA)
LGL87_16290	COG0514	ATP-dependent DNA helicase (RecQ)
LGL87_16295	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
LGL87_16300	COG2050	protein possibly involved in aromatic compounds catabolism
LGL87_16320	COG5564	TIM-barrel signal transduction protein
LGL87_16325	COG5441	Belongs to the UPF0261 family
LGL87_16335	COG0210	DNA helicase
LGL87_16340	COG1011	Hydrolase
LGL87_16345	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LGL87_16350	COG3159	Protein conserved in bacteria
LGL87_16355	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LGL87_16360	COG5567	small periplasmic lipoprotein
LGL87_16370	COG3072	Adenylate cyclase
LGL87_16375	COG0181	hydroxymethylbilane synthase activity
LGL87_16380	COG1587	Uroporphyrinogen-III synthase
LGL87_16385	COG2959	enzyme of heme biosynthesis
LGL87_16390	COG3071	HemY protein
LGL87_16440	COG2244	polysaccharide biosynthetic process
LGL87_16445	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LGL87_16450	COG0456	acetyltransferase
LGL87_16455	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LGL87_16460	COG1088	dTDP-glucose 4,6-dehydratase activity
LGL87_16465	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LGL87_16470	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LGL87_16475	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LGL87_16480	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LGL87_16485	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LGL87_16490	COG3118	belongs to the thioredoxin family
LGL87_16500	COG0248	Ppx GppA phosphatase
LGL87_16510	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LGL87_16525	COG3397	chitin binding
LGL87_16535	COG0129	dihydroxy-acid dehydratase activity
LGL87_16545	COG3978	acetolactate synthase activity
LGL87_16565	COG3085	chromosome segregation
LGL87_16570	COG0583	DNA-binding transcription factor activity
LGL87_16650	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL87_16660	COG0678	peroxiredoxin activity
LGL87_16660	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LGL87_16665	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL87_16700	COG1629	transport
LGL87_16705	COG0165	Argininosuccinate lyase
LGL87_16710	COG0137	argininosuccinate synthase activity
LGL87_16715	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LGL87_16765	COG0527	aspartate kinase activity
LGL87_16765	COG0460	homoserine dehydrogenase
LGL87_16770	COG0626	cystathionine gamma-synthase activity
LGL87_16775	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
LGL87_16785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LGL87_16790	COG1609	Transcriptional regulator
LGL87_16795	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LGL87_16800	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LGL87_16805	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LGL87_16810	COG1575	Belongs to the MenA family. Type 1 subfamily
LGL87_16815	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LGL87_16820	COG3074	FtsZ-dependent cytokinesis
LGL87_16825	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LGL87_16830	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LGL87_16835	COG1494	fructose-1,6-bisphosphatase
LGL87_16840	COG2814	Major facilitator Superfamily
LGL87_16850	COG3152	Membrane
LGL87_16865	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LGL87_16875	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LGL87_16880	COG3678	ATP-independent chaperone mediated protein folding
LGL87_16885	COG0745	RESPONSE REGULATOR receiver
LGL87_16890	COG2205	protein histidine kinase activity
LGL87_16895	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LGL87_16900	COG1045	serine acetyltransferase
LGL87_16905	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LGL87_16910	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LGL87_16915	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LGL87_16920	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LGL87_16925	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LGL87_16930	COG4942	peptidase
LGL87_16935	COG2861	carbohydrate metabolic process
LGL87_16950	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL87_16955	COG0859	PFAM glycosyl transferase family 9
LGL87_16960	COG0859	PFAM glycosyl transferase family 9
LGL87_16965	COG1519	Transferase
LGL87_16985	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LGL87_16990	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LGL87_16995	COG2003	Belongs to the UPF0758 family
LGL87_17000	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LGL87_17005	COG0756	dUTP diphosphatase activity
LGL87_17010	COG1309	transcriptional regulator
LGL87_17015	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LGL87_17020	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LGL87_17025	COG1561	YicC-like family, N-terminal region
LGL87_17040	COG5001	Diguanylate cyclase
LGL87_17045	COG1024	Enoyl-CoA hydratase
LGL87_17050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LGL87_17065	COG2860	membrane
LGL87_17070	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LGL87_17080	COG1758	RNA polymerase activity
LGL87_17085	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LGL87_17090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL87_17095	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LGL87_17100	COG0786	glutamate:sodium symporter activity
LGL87_17105	COG2233	PERMEase
LGL87_17110	COG2982	Protein involved in outer membrane biogenesis
LGL87_17115	COG0456	acetyltransferase
LGL87_17130	COG1011	Hydrolase
LGL87_17145	COG3852	Histidine kinase
LGL87_17155	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LGL87_17165	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LGL87_17170	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LGL87_17170	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LGL87_17175	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LGL87_17180	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LGL87_17185	COG3084	Protein conserved in bacteria
LGL87_17195	COG1763	Mo-molybdopterin cofactor biosynthetic process
LGL87_17220	COG2186	Transcriptional regulator
LGL87_17225	COG1609	Transcriptional regulator
LGL87_17230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LGL87_17240	COG1172	Belongs to the binding-protein-dependent transport system permease family
LGL87_17245	COG1129	ABC transporter
LGL87_17250	COG1869	D-ribose catabolic process
LGL87_17255	COG3158	transport of potassium into the cell
LGL87_17260	COG0714	Associated with various cellular activities
LGL87_17265	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LGL87_17275	COG2502	aspartate--ammonia ligase
LGL87_17280	COG1522	sequence-specific DNA binding
LGL87_17285	COG0716	FMN binding
LGL87_17290	COG0445	tRNA wobble uridine modification
LGL87_17295	COG0357	Ribosomal RNA small subunit methyltransferase G
LGL87_17300	COG3312	ion transport
LGL87_17305	COG0356	it plays a direct role in the translocation of protons across the membrane
LGL87_17315	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LGL87_17325	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LGL87_17330	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LGL87_17340	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LGL87_17355	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LGL87_17360	COG0573	inorganic phosphate transmembrane transporter activity
LGL87_17365	COG0581	inorganic phosphate transmembrane transporter activity
LGL87_17375	COG0704	Plays a role in the regulation of phosphate uptake
LGL87_17380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL87_17385	COG0765	amino acid transport
LGL87_17390	COG0765	amino acid transport
LGL87_17395	COG2252	PERMEase
LGL87_17400	COG0840	transmembrane signaling receptor activity
LGL87_17410	COG3121	Chaperone
LGL87_17425	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LGL87_17430	COG0706	membrane insertase activity
LGL87_17440	COG0594	ribonuclease P activity
LGL87_17445	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LGL87_17530	COG1196	nuclear chromosome segregation
LGL87_17650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL87_17665	COG0741	lytic transglycosylase activity
LGL87_17830	COG2944	sequence-specific DNA binding