locus-tag	class	description
LGL90_00010	COG0592	DNA-directed DNA polymerase activity
LGL90_00020	COG0187	DNA topoisomerase II activity
LGL90_00025	COG0561	phosphatase activity
LGL90_00030	COG0823	Involved in the tonB-independent uptake of proteins
LGL90_00035	COG5645	(Lipo)protein
LGL90_00050	COG0569	domain protein
LGL90_00050	COG2985	domain, Protein
LGL90_00055	COG3977	Valine--pyruvate aminotransferase
LGL90_00060	COG2885	chlorophyll binding
LGL90_00080	COG2818	Glycosylase
LGL90_00130	COG2213	PTS system mannitol-specific
LGL90_00130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_00140	COG3722	fumarate hydratase activity
LGL90_00150	COG2258	MOSC domain
LGL90_00155	COG0840	transmembrane signaling receptor activity
LGL90_00160	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LGL90_00175	COG0437	4 iron, 4 sulfur cluster binding
LGL90_00180	COG2864	formate dehydrogenase
LGL90_00190	COG1921	L-seryl-tRNASec selenium transferase activity
LGL90_00195	COG3276	selenocysteine insertion sequence binding
LGL90_00200	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LGL90_00210	COG3274	enterobacterial common antigen metabolic process
LGL90_00245	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LGL90_00250	COG2986	histidine ammonia-lyase
LGL90_00270	COG2194	sulfuric ester hydrolase activity
LGL90_00275	COG2197	response regulator
LGL90_00280	COG3851	Histidine kinase
LGL90_00285	COG2271	Major facilitator Superfamily
LGL90_00295	COG0747	negative chemotaxis
LGL90_00300	COG0601	transmembrane transport
LGL90_00305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LGL90_00310	COG0444	Belongs to the ABC transporter superfamily
LGL90_00315	COG4608	Belongs to the ABC transporter superfamily
LGL90_00320	COG2194	sulfuric ester hydrolase activity
LGL90_00345	COG1215	transferase activity, transferring glycosyl groups
LGL90_00350	COG1215	transferase activity, transferring glycosyl groups
LGL90_00355	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LGL90_00360	COG3118	belongs to the thioredoxin family
LGL90_00360	COG0457	Tetratricopeptide repeat
LGL90_00365	COG2200	EAL domain
LGL90_00365	COG2199	diguanylate cyclase activity
LGL90_00370	COG1301	dicarboxylic acid transport
LGL90_00375	COG0612	Peptidase, M16
LGL90_00380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LGL90_00385	COG1942	4-Oxalocrotonate Tautomerase
LGL90_00390	COG2200	EAL domain
LGL90_00395	COG2134	cdp-diacylglycerol pyrophosphatase
LGL90_00400	COG1295	ribonuclease BN
LGL90_00410	COG1301	dicarboxylic acid transport
LGL90_00415	COG0626	cystathionine gamma-synthase activity
LGL90_00435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL90_00440	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LGL90_00445	COG0339	signal peptide processing
LGL90_00450	COG0742	ribosomal rna small subunit methyltransferase
LGL90_00460	COG0589	response to stress
LGL90_00470	COG0306	phosphate transporter
LGL90_00475	COG2081	HI0933 family
LGL90_00485	COG1247	-acetyltransferase
LGL90_00490	COG1741	Belongs to the pirin family
LGL90_00495	COG1609	Transcriptional regulator
LGL90_00500	COG2610	gluconate transmembrane transporter activity
LGL90_00505	COG3265	gluconokinase activity
LGL90_00510	COG2095	MarC family integral membrane protein
LGL90_00515	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LGL90_00520	COG3275	phosphorelay sensor kinase activity
LGL90_00525	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LGL90_00530	COG1523	belongs to the glycosyl hydrolase 13 family
LGL90_00535	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LGL90_00540	COG0297	glycogen (starch) synthase activity
LGL90_00545	COG0058	SHG alpha-glucan phosphorylase activity
LGL90_00550	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LGL90_00555	COG1349	DNA-binding transcription factor activity
LGL90_00560	COG0705	Rhomboid family
LGL90_00570	COG2909	trisaccharide binding
LGL90_00575	COG0058	SHG alpha-glucan phosphorylase activity
LGL90_00580	COG1640	4-alpha-glucanotransferase
LGL90_00590	COG1040	competence protein
LGL90_00595	COG0596	Alpha beta hydrolase
LGL90_00615	COG1918	ferrous iron import across plasma membrane
LGL90_00620	COG2183	response to ionizing radiation
LGL90_00645	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LGL90_00660	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LGL90_00670	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LGL90_00675	COG1011	Hydrolase
LGL90_00685	COG0494	nUDIX hydrolase
LGL90_00690	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LGL90_00715	COG4796	Type ii and iii secretion system protein
LGL90_00720	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LGL90_00740	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LGL90_00750	COG0180	Tryptophanyl-tRNA synthetase
LGL90_00770	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LGL90_00775	COG0402	S-adenosylhomocysteine deaminase activity
LGL90_00780	COG0738	Major facilitator superfamily
LGL90_00795	COG1609	Transcriptional regulator
LGL90_00800	COG1486	melibiose metabolic process
LGL90_00805	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LGL90_00820	COG1289	transmembrane transporter activity
LGL90_00825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LGL90_00830	COG1765	OsmC-like protein
LGL90_00855	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LGL90_00860	COG3954	Phosphoribulokinase
LGL90_00870	COG0429	hydrolase of the alpha beta-hydrolase fold
LGL90_00880	COG0859	PFAM glycosyl transferase family 9
LGL90_00885	COG1216	Glycosyl transferase, family 2
LGL90_00890	COG0488	(ABC) transporter
LGL90_00895	COG2249	NAD(P)H dehydrogenase (quinone) activity
LGL90_00905	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LGL90_00910	COG1047	Peptidyl-prolyl cis-trans
LGL90_00920	COG0545	Peptidyl-prolyl cis-trans isomerase
LGL90_00925	COG2964	Protein conserved in bacteria
LGL90_00935	COG2923	Belongs to the DsrF TusC family
LGL90_00940	COG2168	tRNA wobble position uridine thiolation
LGL90_00945	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LGL90_00950	COG0049	tRNA binding
LGL90_00960	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LGL90_00975	COG0051	transcription antitermination factor activity, RNA binding
LGL90_00980	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LGL90_00990	COG0089	rRNA binding
LGL90_00995	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LGL90_01000	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LGL90_01005	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LGL90_01015	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LGL90_01020	COG0255	Belongs to the universal ribosomal protein uL29 family
LGL90_01025	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LGL90_01030	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LGL90_01040	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LGL90_01065	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LGL90_01070	COG1841	ribosomal large subunit assembly
LGL90_01075	COG0200	Binds to the 23S rRNA
LGL90_01080	COG0201	protein transport
LGL90_01085	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LGL90_01090	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LGL90_01100	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LGL90_01110	COG0203	ribosomal protein L17
LGL90_01115	COG0789	Transcriptional regulator
LGL90_01120	COG3036	rescue of stalled ribosome
LGL90_01125	COG1970	mechanosensitive ion channel activity
LGL90_01135	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LGL90_01135	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LGL90_01140	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LGL90_01145	COG0242	peptide deformylase activity
LGL90_01150	COG0758	DNA mediated transformation
LGL90_01155	COG2922	Belongs to the Smg family
LGL90_01160	COG0551	DNA topoisomerase type I activity
LGL90_01165	COG0009	L-threonylcarbamoyladenylate synthase
LGL90_01175	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LGL90_01200	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LGL90_01245	COG0250	Participates in transcription elongation, termination and antitermination
LGL90_01250	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LGL90_01260	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LGL90_01265	COG0222	ribosome binding
LGL90_01270	COG0085	RNA polymerase activity
LGL90_01275	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LGL90_01285	COG2022	thiamine diphosphate biosynthetic process
LGL90_01290	COG2104	thiamine diphosphate biosynthetic process
LGL90_01295	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LGL90_01310	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LGL90_01315	COG2816	NAD+ diphosphatase activity
LGL90_01320	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LGL90_01325	COG1515	deoxyribonuclease V activity
LGL90_01345	COG0151	Belongs to the GarS family
LGL90_01350	COG0138	bifunctional purine biosynthesis protein purh
LGL90_01395	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LGL90_01430	COG0583	DNA-binding transcription factor activity
LGL90_01510	COG1222	aaa ATPase
LGL90_01540	COG0527	aspartate kinase activity
LGL90_01550	COG3223	Belongs to the PsiE family
LGL90_01555	COG3833	ABC-type maltose transport systems, permease component
LGL90_01560	COG1175	transmembrane transport
LGL90_01565	COG2182	Extracellular solute-binding protein
LGL90_01580	COG4580	involved in the transport of maltose and maltodextrins
LGL90_01600	COG2937	Belongs to the GPAT DAPAT family
LGL90_01605	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LGL90_01610	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LGL90_01615	COG0735	belongs to the Fur family
LGL90_01620	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL90_01630	COG0604	alcohol dehydrogenase
LGL90_01645	COG1448	Aminotransferase
LGL90_01650	COG2315	Protein conserved in bacteria
LGL90_01655	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LGL90_01670	COG2252	PERMEase
LGL90_01675	COG0025	NhaP-type Na H and K H
LGL90_01680	COG0583	DNA-binding transcription factor activity
LGL90_01685	COG1380	Effector of murein hydrolase LrgA
LGL90_01690	COG1346	cytolysis
LGL90_01700	COG1560	Kdo2-lipid A biosynthetic process
LGL90_01710	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LGL90_01715	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL90_01720	COG2264	protein methyltransferase activity
LGL90_01725	COG4145	pantothenate transmembrane transporter activity
LGL90_01730	COG3924	membrane
LGL90_01735	COG0439	Biotin carboxylase
LGL90_01740	COG0511	ligase activity, forming carbon-carbon bonds
LGL90_01750	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LGL90_01755	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LGL90_01760	COG0604	alcohol dehydrogenase
LGL90_01765	COG2200	EAL domain
LGL90_01765	COG2199	diguanylate cyclase activity
LGL90_01770	COG1077	Cell shape determining protein MreB Mrl
LGL90_01775	COG1792	Involved in formation and maintenance of cell shape
LGL90_01780	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LGL90_01785	COG0424	maF-like protein
LGL90_01795	COG3164	Protein of unknown function
LGL90_01800	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL90_01805	COG0312	modulator of DNA gyrase
LGL90_01810	COG0583	DNA-binding transcription factor activity
LGL90_01820	COG1566	PFAM secretion protein HlyD family protein
LGL90_01825	COG1289	transmembrane transporter activity
LGL90_01835	COG4290	ribonuclease
LGL90_01840	COG2732	(Barnase) inhibitor
LGL90_01845	COG3028	Belongs to the UPF0307 family
LGL90_01850	COG0312	modulator of DNA gyrase
LGL90_01855	COG3783	Cytochrome b(562)
LGL90_01860	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LGL90_01870	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LGL90_01880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_01880	COG1263	PTS System
LGL90_01885	COG0366	Alpha amylase catalytic
LGL90_01895	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LGL90_01900	COG0540	Belongs to the ATCase OTCase family
LGL90_01905	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_01925	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LGL90_01930	COG1137	ATPase activity
LGL90_01935	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LGL90_01940	COG3117	lipopolysaccharide transmembrane transporter activity
LGL90_01945	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LGL90_01950	COG0517	IMP dehydrogenase activity
LGL90_01950	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LGL90_01955	COG0530	calcium, potassium:sodium antiporter activity
LGL90_01960	COG1127	ABC transporter
LGL90_01965	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LGL90_01970	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LGL90_01975	COG2854	intermembrane phospholipid transfer
LGL90_01980	COG3113	response to antibiotic
LGL90_01985	COG5007	Belongs to the BolA IbaG family
LGL90_01990	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LGL90_02000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LGL90_02005	COG3105	Protein conserved in bacteria
LGL90_02010	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LGL90_02015	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LGL90_02020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LGL90_02025	COG0625	glutathione transferase activity
LGL90_02030	COG2969	positive regulation of protein catabolic process
LGL90_02040	COG0493	'glutamate synthase
LGL90_02045	COG0070	glutamate synthase
LGL90_02045	COG0069	glutamate synthase activity
LGL90_02045	COG0067	glutamate synthase
LGL90_02050	COG1242	4 iron, 4 sulfur cluster binding
LGL90_02060	COG0784	Response regulator, receiver
LGL90_02060	COG5002	protein histidine kinase activity
LGL90_02060	COG2198	Histidine kinase
LGL90_02065	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LGL90_02070	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LGL90_02075	COG2823	Periplasmic or secreted lipoprotein
LGL90_02080	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LGL90_02095	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LGL90_02110	COG1741	Belongs to the pirin family
LGL90_02115	COG0583	DNA-binding transcription factor activity
LGL90_02120	COG2259	Doxx family
LGL90_02130	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
LGL90_02135	COG4575	ribosome binding
LGL90_02150	COG0586	Pfam SNARE associated Golgi protein
LGL90_02165	COG2271	Major facilitator Superfamily
LGL90_02180	COG2721	sulfolactate sulfo-lyase activity
LGL90_02190	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LGL90_02195	COG0861	Integral membrane protein TerC family
LGL90_02200	COG0673	inositol 2-dehydrogenase activity
LGL90_02205	COG1451	nucleotide metabolic process
LGL90_02225	COG0446	pyridine nucleotide-disulphide oxidoreductase
LGL90_02225	COG1902	pentaerythritol trinitrate reductase activity
LGL90_02230	COG2831	hemolysin activation secretion protein
LGL90_02235	COG3210	domain, Protein
LGL90_02265	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LGL90_02280	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_02310	COG0358	DNA primase activity
LGL90_02315	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LGL90_02320	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LGL90_02325	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LGL90_02330	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LGL90_02335	COG1968	undecaprenyl-diphosphatase activity
LGL90_02340	COG0617	tRNA 3'-terminal CCA addition
LGL90_02345	COG4991	sh3 domain protein
LGL90_02350	COG3025	triphosphatase activity
LGL90_02360	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LGL90_02360	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LGL90_02375	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LGL90_02380	COG3384	dioxygenase
LGL90_02385	COG0754	glutathionylspermidine amidase activity
LGL90_02390	COG5463	Belongs to the UPF0441 family
LGL90_02395	COG1538	Outer membrane efflux protein
LGL90_02400	COG0494	nUDIX hydrolase
LGL90_02405	COG3151	Protein conserved in bacteria
LGL90_02410	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LGL90_02415	COG3150	esterase
LGL90_02420	COG0187	DNA topoisomerase II activity
LGL90_02425	COG0583	DNA-binding transcription factor activity
LGL90_02430	COG2249	NAD(P)H dehydrogenase (quinone) activity
LGL90_02435	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LGL90_02445	COG2132	Multicopper oxidase
LGL90_02455	COG0656	L-ascorbic acid biosynthetic process
LGL90_02460	COG1979	alcohol dehydrogenase
LGL90_02465	COG2207	Transcriptional regulator
LGL90_02470	COG0586	Pfam SNARE associated Golgi protein
LGL90_02475	COG0626	cystathionine gamma-synthase activity
LGL90_02480	COG0811	peptide transport
LGL90_02485	COG0848	biopolymer transport protein
LGL90_02540	COG4964	Belongs to the GSP D family
LGL90_02565	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LGL90_02570	COG4774	siderophore transport
LGL90_02580	COG3251	PFAM MbtH domain protein
LGL90_02585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LGL90_02595	COG1120	ATPase activity
LGL90_02600	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL90_02605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL90_02615	COG4592	Periplasmic binding protein
LGL90_02620	COG1169	isochorismate synthase
LGL90_02625	COG1021	2,3-dihydroxybenzoate-AMP ligase
LGL90_02630	COG3433	isochorismatase activity
LGL90_02630	COG1535	isochorismatase
LGL90_02635	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_02650	COG0814	amino acid
LGL90_02655	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LGL90_02660	COG1882	Formate acetyltransferase
LGL90_02670	COG1105	Belongs to the carbohydrate kinase PfkB family
LGL90_02680	COG1349	DNA-binding transcription factor activity
LGL90_02685	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_02690	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_02695	COG3731	PTS system glucitol sorbitol-specific IIA component
LGL90_02700	COG3732	PTS system glucitol sorbitol-specific
LGL90_02705	COG3730	PTS system glucitol sorbitol-specific
LGL90_02720	COG0583	DNA-binding transcription factor activity
LGL90_02795	COG0741	lytic transglycosylase activity
LGL90_02800	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LGL90_02805	COG1194	a g-specific adenine glycosylase
LGL90_02815	COG3171	Protein conserved in bacteria
LGL90_02830	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LGL90_02835	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LGL90_02840	COG1872	DUF167
LGL90_02845	COG0762	integral membrane protein
LGL90_02850	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LGL90_02855	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LGL90_02860	COG2805	Type II/IV secretion system protein
LGL90_02870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL90_02875	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LGL90_02880	COG1678	Uncharacterized ACR, COG1678
LGL90_02885	COG0189	ligase activity
LGL90_02890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LGL90_02895	COG2356	endonuclease I
LGL90_02900	COG3091	SprT-like family
LGL90_02905	COG0640	Transcriptional regulator
LGL90_02920	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LGL90_02925	COG1166	arginine decarboxylase activity
LGL90_02935	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LGL90_02940	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LGL90_02945	COG0126	phosphoglycerate kinase activity
LGL90_02950	COG0191	fructose-bisphosphate aldolase activity
LGL90_02960	COG1279	arginine transmembrane transporter activity
LGL90_02975	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LGL90_02980	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LGL90_02985	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LGL90_02995	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LGL90_03005	COG0006	proline dipeptidase activity
LGL90_03010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL90_03015	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL90_03020	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LGL90_03040	COG1272	protein, Hemolysin III
LGL90_03050	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LGL90_03060	COG0716	FMN binding
LGL90_03065	COG4974	Belongs to the 'phage' integrase family
LGL90_03070	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LGL90_03075	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LGL90_03085	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LGL90_03095	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LGL90_03100	COG1127	ABC transporter
LGL90_03130	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL90_03140	COG2165	general secretion pathway protein
LGL90_03200	COG0583	DNA-binding transcription factor activity
LGL90_03205	COG0583	DNA-binding transcription factor activity
LGL90_03215	COG1609	Transcriptional regulator
LGL90_03220	COG0318	PFAM AMP-dependent synthetase and ligase
LGL90_03220	COG0204	Acyl-transferase
LGL90_03225	COG0477	Major facilitator Superfamily
LGL90_03230	COG0667	Aldo Keto reductase
LGL90_03235	COG0861	Integral membrane protein TerC family
LGL90_03240	COG3066	DNA modification
LGL90_03250	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
LGL90_03255	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LGL90_03280	COG4967	type IV pilus modification protein PilV
LGL90_03285	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LGL90_03290	COG1025	Belongs to the peptidase M16 family
LGL90_03295	COG1074	ATP-dependent DNA helicase activity
LGL90_03300	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LGL90_03305	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LGL90_03305	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LGL90_03310	COG0860	N-Acetylmuramoyl-L-alanine amidase
LGL90_03330	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LGL90_03335	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LGL90_03340	COG2166	iron-sulfur cluster assembly
LGL90_03345	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LGL90_03355	COG0583	DNA-binding transcription factor activity
LGL90_03360	COG2363	Small membrane protein
LGL90_03365	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LGL90_03375	COG1611	Belongs to the LOG family
LGL90_03390	COG3098	single-species biofilm formation
LGL90_03395	COG0564	pseudouridine synthase activity
LGL90_03410	COG2171	N-acyltransferase activity
LGL90_03415	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LGL90_03430	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LGL90_03435	COG0528	UMP kinase activity
LGL90_03455	COG0575	Belongs to the CDS family
LGL90_03460	COG0750	zinc metalloprotease
LGL90_03470	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
LGL90_03475	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LGL90_03495	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LGL90_03500	COG0587	DNA-directed DNA polymerase activity
LGL90_03505	COG0825	malonyl-CoA metabolic process
LGL90_03520	COG0346	lactoylglutathione lyase activity
LGL90_03535	COG4568	rho-dependent transcription termination
LGL90_03545	COG4681	YaeQ
LGL90_03555	COG3015	lipoprotein NlpE involved in copper resistance
LGL90_03560	COG0442	prolyl-tRNA aminoacylation
LGL90_03565	COG1720	tRNA m6t6A37 methyltransferase activity
LGL90_03575	COG1464	Belongs to the NlpA lipoprotein family
LGL90_03580	COG2011	ABC-type metal ion transport system permease component
LGL90_03590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LGL90_03615	COG5544	Lipoprotein
LGL90_03620	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LGL90_03625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL90_03625	COG0045	succinate-CoA ligase (ADP-forming) activity
LGL90_03625	COG1042	CoA-binding domain protein
LGL90_03630	COG3148	PFAM DTW domain containing protein
LGL90_03635	COG3118	belongs to the thioredoxin family
LGL90_03640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL90_03645	COG2814	Major facilitator Superfamily
LGL90_03650	COG1566	PFAM secretion protein HlyD family protein
LGL90_03660	COG1846	Transcriptional regulator
LGL90_03665	COG2814	Major facilitator Superfamily
LGL90_03675	COG2113	Glycine betaine
LGL90_03680	COG4176	ABC-type proline glycine betaine transport system permease component
LGL90_03685	COG4175	Glycine betaine
LGL90_03695	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LGL90_03700	COG1780	Probably involved in ribonucleotide reductase function
LGL90_03730	COG1278	Cold shock
LGL90_03735	COG0579	oxidoreductase
LGL90_03740	COG1304	FMN binding
LGL90_03745	COG1620	l-lactate permease
LGL90_03770	COG1129	ABC transporter
LGL90_03775	COG1172	Belongs to the binding-protein-dependent transport system permease family
LGL90_03785	COG1069	ribulokinase activity
LGL90_03855	COG4249	Peptidase C14 caspase catalytic subunit p20
LGL90_03875	COG0582	viral genome integration into host DNA
LGL90_03885	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LGL90_03890	COG2867	negative regulation of translational initiation
LGL90_03900	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL90_03905	COG0497	DNA recombination
LGL90_03910	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LGL90_03915	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LGL90_03925	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LGL90_03940	COG0513	Belongs to the DEAD box helicase family
LGL90_03950	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LGL90_03960	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LGL90_03970	COG3086	response to oxidative stress
LGL90_03975	COG0481	GTPase activity
LGL90_03990	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LGL90_04000	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LGL90_04010	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL90_04015	COG1737	Transcriptional regulator
LGL90_04025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_04025	COG1263	PTS System
LGL90_04030	COG0560	Phosphoserine phosphatase
LGL90_04040	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LGL90_04055	COG2205	protein histidine kinase activity
LGL90_04060	COG3170	Tfp pilus assembly protein FimV
LGL90_04065	COG2204	response regulator
LGL90_04070	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LGL90_04070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL90_04075	COG0347	Belongs to the P(II) protein family
LGL90_04090	COG1735	metal-dependent hydrolase with the TIM-barrel fold
LGL90_04095	COG3457	Alanine racemase
LGL90_04105	COG2188	Transcriptional regulator
LGL90_04110	COG1017	nitric oxide dioxygenase activity
LGL90_04110	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL90_04120	COG2814	Major facilitator Superfamily
LGL90_04125	COG3711	transcriptional antiterminator
LGL90_04130	COG3683	transport system, periplasmic component
LGL90_04135	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LGL90_04145	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LGL90_04150	COG1959	2 iron, 2 sulfur cluster binding
LGL90_04160	COG0822	iron-sulfur transferase activity
LGL90_04175	COG0443	Heat shock 70 kDa protein
LGL90_04180	COG0633	Ferredoxin
LGL90_04185	COG2975	iron-sulfur cluster assembly
LGL90_04200	COG2373	Large extracellular alpha-helical protein
LGL90_04205	COG4953	penicillin-binding protein 1C
LGL90_04220	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LGL90_04240	COG0124	histidyl-tRNA synthetase
LGL90_04245	COG2976	Protein conserved in bacteria
LGL90_04250	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL90_04260	COG1645	bacterial-type flagellum-dependent swarming motility
LGL90_04265	COG1570	exodeoxyribonuclease VII activity
LGL90_04270	COG0517	IMP dehydrogenase activity
LGL90_04270	COG0516	GMP reductase activity
LGL90_04275	COG0519	Catalyzes the synthesis of GMP from XMP
LGL90_04275	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LGL90_04285	COG0351	phosphomethylpyrimidine kinase
LGL90_04300	COG1597	lipid kinase activity
LGL90_04305	COG0826	peptidase U32
LGL90_04310	COG3422	double-strand break repair
LGL90_04315	COG0745	RESPONSE REGULATOR receiver
LGL90_04320	COG2205	protein histidine kinase activity
LGL90_04325	COG0477	Major facilitator Superfamily
LGL90_04330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL90_04340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL90_04360	COG3121	Chaperone
LGL90_04370	COG0443	Heat shock 70 kDa protein
LGL90_04375	COG2239	Acts as a magnesium transporter
LGL90_04390	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LGL90_04395	COG0573	inorganic phosphate transmembrane transporter activity
LGL90_04400	COG0581	inorganic phosphate transmembrane transporter activity
LGL90_04410	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL90_04415	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LGL90_04420	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LGL90_04425	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LGL90_04430	COG2233	PERMEase
LGL90_04435	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LGL90_04440	COG1393	Belongs to the ArsC family
LGL90_04445	COG4783	chaperone-mediated protein folding
LGL90_04450	COG0628	permease
LGL90_04455	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LGL90_04460	COG2716	regulation of RNA biosynthetic process
LGL90_04465	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LGL90_04470	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LGL90_04490	COG0400	carboxylic ester hydrolase activity
LGL90_04500	COG1876	peptidase activity
LGL90_04505	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LGL90_04510	COG1393	Belongs to the ArsC family
LGL90_04515	COG1605	Chorismate mutase
LGL90_04525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL90_04535	COG2197	response regulator
LGL90_04540	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL90_04540	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL90_04545	COG3062	negative regulation of establishment of protein localization
LGL90_04550	COG0243	molybdopterin cofactor binding
LGL90_04555	COG3043	anaerobic respiration
LGL90_04560	COG3005	denitrification pathway
LGL90_04565	COG0494	nUDIX hydrolase
LGL90_04570	COG0281	malic enzyme
LGL90_04570	COG0280	phosphate acetyltransferase
LGL90_04575	COG1671	Belongs to the UPF0178 family
LGL90_04590	COG3111	PFAM Bacterial OB fold (BOF) protein
LGL90_04600	COG2837	iron assimilation
LGL90_04605	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LGL90_04620	COG2731	YhcH YjgK YiaL family protein
LGL90_04625	COG1737	Transcriptional regulator
LGL90_04635	COG4150	thiosulfate binding
LGL90_04640	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LGL90_04645	COG4208	sulfate ABC transporter
LGL90_04655	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LGL90_04670	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_04680	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LGL90_04690	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LGL90_04695	COG3530	Putative quorum-sensing-regulated virulence factor
LGL90_04765	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LGL90_04770	COG1914	H( )-stimulated, divalent metal cation uptake system
LGL90_04790	COG0837	glucose binding
LGL90_04795	COG2223	nitrite transmembrane transporter activity
LGL90_04800	COG3279	Response regulator of the LytR AlgR family
LGL90_04805	COG3275	phosphorelay sensor kinase activity
LGL90_04815	COG0436	Aminotransferase
LGL90_04820	COG3038	cytochrome b561
LGL90_04830	COG1598	PFAM Uncharacterised protein family UPF0150
LGL90_04835	COG2951	lytic endotransglycosylase activity
LGL90_04840	COG2824	Alkylphosphonate utilization operon protein PhnA
LGL90_04860	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL90_04865	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL90_04870	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LGL90_04875	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LGL90_04880	COG1138	Cytochrome C-type biogenesis protein
LGL90_04885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LGL90_04890	COG3088	subunit of a heme lyase
LGL90_04890	COG4235	cytochrome complex assembly
LGL90_04895	COG3088	subunit of a heme lyase
LGL90_04895	COG4235	cytochrome complex assembly
LGL90_04910	COG3691	Protein conserved in bacteria
LGL90_04915	COG0183	Belongs to the thiolase family
LGL90_04925	COG2062	phosphohistidine phosphatase, SixA
LGL90_04930	COG2840	Smr protein MutS2
LGL90_04935	COG2890	protein-(glutamine-N5) methyltransferase activity
LGL90_04945	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LGL90_04950	COG0730	response to heat
LGL90_04955	COG3101	peptidyl-lysine hydroxylation
LGL90_04970	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LGL90_05000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LGL90_05005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LGL90_05030	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LGL90_05040	COG0586	Pfam SNARE associated Golgi protein
LGL90_05050	COG0285	dihydrofolate synthase activity
LGL90_05055	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LGL90_05060	COG1286	toxin biosynthetic process
LGL90_05065	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LGL90_05070	COG0163	prenyltransferase activity
LGL90_05085	COG4215	(ABC) transporter
LGL90_05090	COG4160	amino acid transport
LGL90_05100	COG1090	epimerase
LGL90_05105	COG0625	glutathione transferase activity
LGL90_05115	COG0622	Phosphoesterase
LGL90_05120	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LGL90_05125	COG3037	sugar-specific permease SgaT UlaA
LGL90_05140	COG1609	Transcriptional regulator
LGL90_05145	COG0857	belongs to the CobB CobQ family
LGL90_05145	COG0280	phosphate acetyltransferase
LGL90_05155	COG3092	negative regulation of chromosome organization
LGL90_05160	COG3013	Belongs to the UPF0304 family
LGL90_05170	COG0490	domain, Protein
LGL90_05170	COG0471	metal ion transport
LGL90_05175	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LGL90_05180	COG0436	Aminotransferase
LGL90_05185	COG0583	DNA-binding transcription factor activity
LGL90_05190	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_05195	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_05215	COG1034	ATP synthesis coupled electron transport
LGL90_05220	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LGL90_05225	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_05230	COG0839	Belongs to the complex I subunit 6 family
LGL90_05240	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LGL90_05245	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_05260	COG4575	ribosome binding
LGL90_05265	COG1169	isochorismate synthase
LGL90_05270	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LGL90_05275	COG0596	Alpha beta hydrolase
LGL90_05280	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LGL90_05305	COG0814	amino acid
LGL90_05320	COG2246	polysaccharide biosynthetic process
LGL90_05330	COG4574	serine-type endopeptidase inhibitor activity
LGL90_05340	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL90_05350	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LGL90_05355	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LGL90_05365	COG0784	Response regulator, receiver
LGL90_05365	COG2205	protein histidine kinase activity
LGL90_05375	COG2198	Histidine kinase
LGL90_05375	COG0642	Histidine kinase
LGL90_05380	COG2223	nitrite transmembrane transporter activity
LGL90_05400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL90_05405	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LGL90_05455	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LGL90_05460	COG5532	Uncharacterized conserved protein (DUF2303)
LGL90_05505	COG4626	Terminase
LGL90_05505	COG1802	Transcriptional regulator
LGL90_05510	COG4725	Belongs to the MT-A70-like family
LGL90_05525	COG1403	HNH endonuclease
LGL90_05540	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LGL90_05580	COG3646	Phage regulatory protein
LGL90_05595	COG4626	Terminase
LGL90_05595	COG1802	Transcriptional regulator
LGL90_05645	COG4386	tail sheath protein
LGL90_05690	COG3299	homolog of phage Mu protein gp47
LGL90_05695	COG3778	Protein conserved in bacteria
LGL90_05715	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LGL90_05730	COG3083	sulfuric ester hydrolase activity
LGL90_05735	COG3082	Protein of unknown function (DUF1414)
LGL90_05750	COG1061	Type III restriction enzyme res subunit
LGL90_05755	COG1187	pseudouridine synthase activity
LGL90_05760	COG2814	Major facilitator Superfamily
LGL90_05770	COG4172	Belongs to the ABC transporter superfamily
LGL90_05775	COG4239	(ABC) transporter, permease
LGL90_05780	COG4174	ABC transporter (Permease)
LGL90_05785	COG4166	transmembrane transport
LGL90_05790	COG2200	EAL domain
LGL90_05795	COG0791	NLP P60 protein
LGL90_05800	COG0671	phosphoesterase, PA-phosphatase related
LGL90_05805	COG0523	cobalamin synthesis protein
LGL90_05815	COG0246	Mannitol dehydrogenase
LGL90_05825	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LGL90_05840	COG0243	molybdopterin cofactor binding
LGL90_05845	COG3005	denitrification pathway
LGL90_05860	COG1105	Belongs to the carbohydrate kinase PfkB family
LGL90_05865	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LGL90_05865	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LGL90_05865	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LGL90_05870	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LGL90_05875	COG2855	membrane
LGL90_05885	COG0583	DNA-binding transcription factor activity
LGL90_05890	COG0833	amino acid
LGL90_05900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL90_05910	COG4771	TonB-dependent receptor
LGL90_05915	COG0531	amino acid
LGL90_05920	COG2925	Exonuclease
LGL90_05925	COG3320	Male sterility
LGL90_05925	COG1022	Amp-dependent synthetase and ligase
LGL90_05930	COG1289	transmembrane transporter activity
LGL90_05950	COG3842	ATPase activity
LGL90_05960	COG1840	ABC-type Fe3 transport system, periplasmic component
LGL90_05965	COG2271	Major facilitator Superfamily
LGL90_05980	COG4565	transcriptional regulatory protein
LGL90_05985	COG3290	protein histidine kinase activity
LGL90_05990	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LGL90_05995	COG3052	prosthetic group binding
LGL90_06000	COG2301	Belongs to the HpcH HpaI aldolase family
LGL90_06005	COG3051	citrate lyase alpha subunit
LGL90_06020	COG0471	metal ion transport
LGL90_06050	COG3423	Transcriptional regulator
LGL90_06065	COG0582	viral genome integration into host DNA
LGL90_06100	COG3321	synthase
LGL90_06100	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_06100	COG0604	alcohol dehydrogenase
LGL90_06110	COG1609	Transcriptional regulator
LGL90_06130	COG0840	transmembrane signaling receptor activity
LGL90_06135	COG1285	pathogenesis
LGL90_06145	COG0589	response to stress
LGL90_06165	COG1360	Flagellar Motor Protein
LGL90_06170	COG2198	Histidine kinase
LGL90_06170	COG0643	Histidine kinase
LGL90_06175	COG0835	chemotaxis
LGL90_06180	COG0840	transmembrane signaling receptor activity
LGL90_06185	COG0840	transmembrane signaling receptor activity
LGL90_06190	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LGL90_06200	COG0745	RESPONSE REGULATOR receiver
LGL90_06205	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LGL90_06210	COG1404	Belongs to the peptidase S8 family
LGL90_06210	COG4935	Belongs to the peptidase S8 family
LGL90_06215	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LGL90_06220	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LGL90_06230	COG3418	PFAM FlgN family protein
LGL90_06235	COG2747	anti-sigma28 factor FlgM
LGL90_06245	COG1815	bacterial-type flagellum-dependent cell motility
LGL90_06250	COG1558	bacterial-type flagellum-dependent cell motility
LGL90_06330	COG1580	Controls the rotational direction of flagella during chemotaxis
LGL90_06345	COG1157	protein secretion by the type III secretion system
LGL90_06355	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LGL90_06365	COG1677	Flagellar hook-basal body complex protein FliE
LGL90_06375	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LGL90_06380	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LGL90_06420	COG1191	sigma factor activity
LGL90_06430	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LGL90_06435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_06440	COG0765	amino acid transport
LGL90_06445	COG1126	abc transporter atp-binding protein
LGL90_06450	COG0506	proline dehydrogenase activity
LGL90_06450	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LGL90_06450	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LGL90_06455	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LGL90_06460	COG3710	Transcriptional regulator
LGL90_06465	COG0531	amino acid
LGL90_06475	COG1113	amino acid transport
LGL90_06500	COG2197	response regulator
LGL90_06505	COG0322	excinuclease ABC activity
LGL90_06510	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LGL90_06570	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LGL90_06665	COG4695	Portal protein
LGL90_06720	COG4974	Belongs to the 'phage' integrase family
LGL90_06725	COG1192	Involved in chromosome partitioning
LGL90_06840	COG2801	Transposase and inactivated derivatives
LGL90_06845	COG0840	transmembrane signaling receptor activity
LGL90_06880	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LGL90_06885	COG2153	protein acetylation
LGL90_06920	COG0531	amino acid
LGL90_06925	COG0076	glutamate decarboxylase activity
LGL90_06940	COG2235	arginine
LGL90_06955	COG1757	Na H antiporter
LGL90_06960	COG3122	Protein conserved in bacteria
LGL90_06970	COG1187	pseudouridine synthase activity
LGL90_06975	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LGL90_06980	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LGL90_06985	COG2723	6-phospho-beta-galactosidase activity
LGL90_06990	COG1447	Phosphotransferase system cellobiose-specific component IIA
LGL90_06995	COG2169	Transcriptional regulator
LGL90_06995	COG1917	Cupin 2, conserved barrel domain protein
LGL90_07010	COG1278	Cold shock
LGL90_07015	COG1278	Cold shock
LGL90_07035	COG1181	Belongs to the D-alanine--D-alanine ligase family
LGL90_07055	COG3706	GGDEF domain
LGL90_07055	COG5001	Diguanylate cyclase
LGL90_07055	COG4251	negative regulation of phosphorylation
LGL90_07055	COG2203	Gaf domain
LGL90_07065	COG1132	(ABC) transporter
LGL90_07085	COG2207	Transcriptional regulator
LGL90_07120	COG1113	amino acid transport
LGL90_07140	COG1496	oxidoreductase activity
LGL90_07150	COG2226	methyltransferase
LGL90_07180	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LGL90_07190	COG1960	acyl-CoA dehydrogenase activity
LGL90_07210	COG1971	Probably functions as a manganese efflux pump
LGL90_07215	COG4811	Protein of unknown function (DUF986)
LGL90_07220	COG3716	PTS system mannose fructose sorbose family IID component
LGL90_07225	COG3715	PTS system
LGL90_07230	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_07230	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_07235	COG1253	flavin adenine dinucleotide binding
LGL90_07240	COG1760	l-serine dehydratase
LGL90_07245	COG0494	nUDIX hydrolase
LGL90_07265	COG0513	Belongs to the DEAD box helicase family
LGL90_07270	COG3141	response to X-ray
LGL90_07275	COG3097	Belongs to the UPF0267 family
LGL90_07285	COG1770	oligopeptidase
LGL90_07290	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LGL90_07305	COG1528	Iron-storage protein
LGL90_07310	COG2372	response to copper ion
LGL90_07315	COG1276	copper resistance
LGL90_07395	COG4251	negative regulation of phosphorylation
LGL90_07395	COG3706	GGDEF domain
LGL90_07395	COG5001	Diguanylate cyclase
LGL90_07395	COG2203	Gaf domain
LGL90_07400	COG3008	intermembrane lipid transfer
LGL90_07405	COG2995	paraquat-inducible protein a
LGL90_07410	COG1956	GAF domain-containing protein
LGL90_07420	COG0793	Belongs to the peptidase S41A family
LGL90_07425	COG0501	Belongs to the peptidase M48B family
LGL90_07435	COG2814	Major facilitator Superfamily
LGL90_07445	COG3023	N-Acetylmuramoyl-L-alanine amidase
LGL90_07450	COG1823	symporter activity
LGL90_07455	COG1988	membrane-bound metal-dependent
LGL90_07460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LGL90_07470	COG3001	Fructosamine kinase
LGL90_07475	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL90_07480	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL90_07485	COG1121	(ABC) transporter
LGL90_07490	COG0803	Belongs to the bacterial solute-binding protein 9 family
LGL90_07565	COG0776	regulation of translation
LGL90_07590	COG2184	nucleotidyltransferase activity
LGL90_07605	COG4974	Belongs to the 'phage' integrase family
LGL90_07610	COG4139	cobalamin transport
LGL90_07620	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LGL90_07625	COG0463	Glycosyl transferase, family 2
LGL90_07640	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LGL90_07645	COG2076	Multidrug Resistance protein
LGL90_07650	COG2076	Multidrug Resistance protein
LGL90_07655	COG0791	NLP P60 protein
LGL90_07660	COG0095	Lipoate-protein ligase
LGL90_07670	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LGL90_07675	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL90_07680	COG4558	Periplasmic binding protein
LGL90_07685	COG3720	iron ion transport
LGL90_07690	COG4771	TonB-dependent receptor
LGL90_07700	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL90_07705	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LGL90_07710	COG0574	Belongs to the PEP-utilizing enzyme family
LGL90_07710	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LGL90_07720	COG0628	permease
LGL90_07725	COG0247	lactate metabolic process
LGL90_07725	COG0277	FAD linked oxidase domain protein
LGL90_07730	COG2050	protein possibly involved in aromatic compounds catabolism
LGL90_07735	COG0316	Belongs to the HesB IscA family
LGL90_07740	COG0719	Fe-S assembly protein
LGL90_07745	COG0396	ATPase activity
LGL90_07750	COG0719	Fe-S assembly protein
LGL90_07760	COG2166	iron-sulfur cluster assembly
LGL90_07765	COG1376	ErfK ybiS ycfS ynhG family protein
LGL90_07765	COG1388	LysM domain
LGL90_07800	COG0307	riboflavin synthase, alpha
LGL90_07805	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LGL90_07810	COG2814	Major facilitator Superfamily
LGL90_07815	COG0583	DNA-binding transcription factor activity
LGL90_07820	COG1609	Transcriptional regulator
LGL90_07830	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LGL90_07835	COG0791	NLP P60 protein
LGL90_07840	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LGL90_07855	COG1902	pentaerythritol trinitrate reductase activity
LGL90_07860	COG1309	transcriptional regulator
LGL90_07865	COG2194	sulfuric ester hydrolase activity
LGL90_07870	COG3313	Fe-S protein
LGL90_07875	COG4989	oxidoreductase activity
LGL90_07885	COG1846	Transcriptional regulator
LGL90_07890	COG3133	Outer membrane lipoprotein
LGL90_07895	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LGL90_07940	COG0484	heat shock protein binding
LGL90_07950	COG3104	oligopeptide transport
LGL90_07960	COG4172	Belongs to the ABC transporter superfamily
LGL90_07965	COG4172	Belongs to the ABC transporter superfamily
LGL90_07970	COG4171	peptide transport system, permease
LGL90_07980	COG4166	transmembrane transport
LGL90_07995	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LGL90_08000	COG1842	Phage shock protein A
LGL90_08010	COG1983	PspC domain protein
LGL90_08020	COG3106	COG3106 Predicted ATPase
LGL90_08025	COG3768	UPF0283 membrane protein
LGL90_08030	COG5654	RES domain protein
LGL90_08035	COG5642	Protein of unknown function (DUF2384)
LGL90_08045	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LGL90_08050	COG4948	Mandelate Racemase Muconate Lactonizing
LGL90_08055	COG2866	Carboxypeptidase
LGL90_08060	COG4166	transmembrane transport
LGL90_08075	COG0674	pyruvate-flavodoxin oxidoreductase activity
LGL90_08075	COG1013	pyruvate-flavodoxin oxidoreductase activity
LGL90_08075	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LGL90_08075	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_08085	COG1285	pathogenesis
LGL90_08090	COG3042	response to heat
LGL90_08095	COG3187	Heat shock protein
LGL90_08100	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LGL90_08105	COG2911	Protein conserved in bacteria
LGL90_08120	COG3784	Protein of unknown function (DUF1318)
LGL90_08125	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LGL90_08130	COG1643	Atp-dependent helicase
LGL90_08135	COG3591	Belongs to the peptidase S1B family
LGL90_08145	COG1881	PFAM PEBP family protein
LGL90_08150	COG2207	Transcriptional regulator
LGL90_08165	COG2205	protein histidine kinase activity
LGL90_08170	COG0745	RESPONSE REGULATOR receiver
LGL90_08180	COG0531	amino acid
LGL90_08190	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LGL90_08195	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LGL90_08200	COG3623	hexulose-6-phosphate isomerase
LGL90_08205	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LGL90_08235	COG0589	response to stress
LGL90_08240	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LGL90_08245	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LGL90_08250	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LGL90_08260	COG1011	Hydrolase
LGL90_08300	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LGL90_08320	COG3023	N-Acetylmuramoyl-L-alanine amidase
LGL90_08325	COG4221	oxidoreductase activity
LGL90_08330	COG1742	UPF0060 membrane protein
LGL90_08350	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LGL90_08355	COG1940	carbohydrate kinase activity
LGL90_08375	COG0114	fumarate hydratase activity
LGL90_08380	COG1482	cell wall glycoprotein biosynthetic process
LGL90_08385	COG5339	Protein conserved in bacteria
LGL90_08405	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LGL90_08410	COG0385	Bile acid
LGL90_08415	COG0673	inositol 2-dehydrogenase activity
LGL90_08425	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LGL90_08435	COG4657	Part of a membrane complex involved in electron transport
LGL90_08450	COG3708	Transcriptional regulator
LGL90_08450	COG2207	Transcriptional regulator
LGL90_08460	COG4659	FMN binding
LGL90_08470	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LGL90_08475	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LGL90_08480	COG5002	protein histidine kinase activity
LGL90_08480	COG5001	Diguanylate cyclase
LGL90_08480	COG3447	MASE1 domain protein
LGL90_08485	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LGL90_08495	COG0023	Translation Initiation Factor
LGL90_08510	COG4974	Belongs to the 'phage' integrase family
LGL90_08555	COG0463	Glycosyl transferase, family 2
LGL90_08595	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LGL90_08600	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LGL90_08605	COG0671	phosphoesterase, PA-phosphatase related
LGL90_08615	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LGL90_08635	COG0583	DNA-binding transcription factor activity
LGL90_08650	COG0616	signal peptide processing
LGL90_08655	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_08665	COG1187	pseudouridine synthase activity
LGL90_08670	COG0009	L-threonylcarbamoyladenylate synthase
LGL90_08675	COG0613	PHP domain protein
LGL90_08685	COG0512	Glutamine amidotransferase of anthranilate synthase
LGL90_08695	COG0135	phosphoribosylanthranilate isomerase activity
LGL90_08695	COG0134	indole-3-glycerol-phosphate synthase activity
LGL90_08700	COG0133	tryptophan synthase activity
LGL90_08715	COG3047	cAMP biosynthetic process
LGL90_08720	COG0727	PFAM Uncharacterised protein family (UPF0153)
LGL90_08745	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LGL90_08780	COG3710	Transcriptional regulator
LGL90_08795	COG2350	Protein conserved in bacteria
LGL90_08820	COG3099	Belongs to the UPF0263 family
LGL90_08835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LGL90_08850	COG4166	transmembrane transport
LGL90_08855	COG2095	MarC family integral membrane protein
LGL90_08865	COG1454	alcohol dehydrogenase
LGL90_08865	COG1012	belongs to the aldehyde dehydrogenase family
LGL90_08885	COG0745	RESPONSE REGULATOR receiver
LGL90_08890	COG1752	Esterase of the alpha-beta hydrolase superfamily
LGL90_08900	COG0788	formyltetrahydrofolate deformylase activity
LGL90_08930	COG0708	Exodeoxyribonuclease III
LGL90_08935	COG0494	nUDIX hydrolase
LGL90_08945	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LGL90_08955	COG0778	Nitroreductase
LGL90_08960	COG0616	signal peptide processing
LGL90_08965	COG0252	asparaginase activity
LGL90_08970	COG1335	isochorismatase
LGL90_08975	COG3139	Protein of unknown function (DUF1315)
LGL90_08980	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LGL90_08995	COG2194	sulfuric ester hydrolase activity
LGL90_09000	COG3713	MltA-interacting MipA family protein
LGL90_09010	COG2766	serine protein kinase
LGL90_09015	COG2718	Belongs to the UPF0229 family
LGL90_09035	COG2202	Pas domain
LGL90_09035	COG2200	EAL domain
LGL90_09035	COG2199	diguanylate cyclase activity
LGL90_09045	COG2814	Major facilitator Superfamily
LGL90_09050	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LGL90_09055	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LGL90_09060	COG2719	SpoVR family
LGL90_09070	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LGL90_09090	COG2983	Belongs to the UPF0260 family
LGL90_09095	COG0179	Fumarylacetoacetate (FAA) hydrolase
LGL90_09100	COG3100	YcgL domain-containing protein
LGL90_09105	COG0850	regulation of cytokinetic process
LGL90_09110	COG2894	cell division
LGL90_09115	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LGL90_09120	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LGL90_09125	COG0318	PFAM AMP-dependent synthetase and ligase
LGL90_09130	COG3065	identical protein binding
LGL90_09135	COG1214	PFAM Peptidase M22, glycoprotease
LGL90_09140	COG1199	ATP-dependent helicase activity
LGL90_09145	COG0251	oxidation-reduction process
LGL90_09150	COG2076	Multidrug Resistance protein
LGL90_09160	COG0800	Aldolase
LGL90_09165	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LGL90_09170	COG1737	Transcriptional regulator
LGL90_09175	COG0469	pyruvate kinase activity
LGL90_09180	COG1560	Kdo2-lipid A biosynthetic process
LGL90_09185	COG0739	heme binding
LGL90_09190	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LGL90_09195	COG1121	(ABC) transporter
LGL90_09200	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LGL90_09205	COG3104	oligopeptide transport
LGL90_09210	COG2255	four-way junction helicase activity
LGL90_09220	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LGL90_09230	COG0494	nUDIX hydrolase
LGL90_09235	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LGL90_09245	COG1801	Protein of unknown function DUF72
LGL90_09250	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LGL90_09265	COG3142	Participates in the control of copper homeostasis
LGL90_09270	COG3102	Protein conserved in bacteria
LGL90_09295	COG0728	peptidoglycan biosynthetic process
LGL90_09300	COG0673	inositol 2-dehydrogenase activity
LGL90_09310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LGL90_09330	COG3381	protein complex oligomerization
LGL90_09340	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LGL90_09365	COG3706	GGDEF domain
LGL90_09370	COG0659	secondary active sulfate transmembrane transporter activity
LGL90_09375	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LGL90_09390	COG2890	protein-(glutamine-N5) methyltransferase activity
LGL90_09395	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LGL90_09400	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LGL90_09405	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LGL90_09415	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LGL90_09425	COG0193	aminoacyl-tRNA hydrolase activity
LGL90_09435	COG0012	GTP binding
LGL90_09440	COG0582	viral genome integration into host DNA
LGL90_09470	COG3311	Transcriptional regulator
LGL90_09480	COG4974	Belongs to the 'phage' integrase family
LGL90_09485	COG2003	Belongs to the UPF0758 family
LGL90_09500	COG1396	sequence-specific DNA binding
LGL90_09525	COG2205	protein histidine kinase activity
LGL90_09555	COG0309	Hydrogenase expression formation protein (HypE)
LGL90_09560	COG0409	Hydrogenase expression formation protein
LGL90_09565	COG0298	carbon dioxide binding
LGL90_09570	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LGL90_09575	COG0375	protein maturation
LGL90_09585	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL90_09590	COG0651	ATP synthesis coupled electron transport
LGL90_09595	COG0650	Formate hydrogenlyase subunit 4
LGL90_09600	COG3261	NADH dehydrogenase
LGL90_09600	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LGL90_09605	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LGL90_09610	COG3260	NADH ubiquinone oxidoreductase 20
LGL90_09620	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LGL90_09625	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LGL90_09630	COG3383	formate dehydrogenase (NAD+) activity
LGL90_09635	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LGL90_09640	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LGL90_09660	COG0402	S-adenosylhomocysteine deaminase activity
LGL90_09670	COG1228	amidohydrolase
LGL90_09690	COG3724	N-succinylarginine dihydrolase activity
LGL90_09700	COG3138	arginine N-succinyltransferase
LGL90_09705	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LGL90_09710	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LGL90_09715	COG1271	oxidase subunit
LGL90_09720	COG1294	oxidase, subunit
LGL90_09730	COG3850	Histidine kinase
LGL90_09735	COG2375	cellular response to nickel ion
LGL90_09740	COG0387	Pfam Sodium calcium exchanger
LGL90_09745	COG1702	phosphate starvation-inducible protein PhoH
LGL90_09750	COG4977	sequence-specific DNA binding
LGL90_09795	COG0471	metal ion transport
LGL90_09800	COG3290	protein histidine kinase activity
LGL90_09805	COG4565	transcriptional regulatory protein
LGL90_09810	COG3493	citrate carrier protein
LGL90_09815	COG0840	transmembrane signaling receptor activity
LGL90_09820	COG0339	signal peptide processing
LGL90_09830	COG2723	6-phospho-beta-galactosidase activity
LGL90_09835	COG3916	Acyl-homoserine-lactone synthase
LGL90_09840	COG2771	luxR family
LGL90_09880	COG0538	isocitrate dehydrogenase activity
LGL90_09885	COG1187	pseudouridine synthase activity
LGL90_09895	COG0482	sulfurtransferase activity
LGL90_09900	COG2915	High frequency lysogenization protein hflD homolog
LGL90_09905	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LGL90_09915	COG0745	RESPONSE REGULATOR receiver
LGL90_09920	COG2205	protein histidine kinase activity
LGL90_09925	COG2850	peptidyl-arginine hydroxylation
LGL90_09945	COG4591	ABC-type transport system involved in lipoprotein release permease component
LGL90_09955	COG4591	ABC-type transport system involved in lipoprotein release permease component
LGL90_09960	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LGL90_09965	COG3134	Outer membrane lipoprotein
LGL90_09970	COG1252	NADH dehydrogenase
LGL90_09975	COG3150	esterase
LGL90_09990	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
LGL90_09995	COG5633	Lipoprotein
LGL90_10000	COG0537	adenosine 5'-monophosphoramidase activity
LGL90_10005	COG1263	PTS System
LGL90_10005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_10010	COG0084	hydrolase, TatD family'
LGL90_10015	COG0470	DNA polymerase III
LGL90_10020	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LGL90_10025	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LGL90_10030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LGL90_10035	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LGL90_10040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LGL90_10050	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LGL90_10055	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LGL90_10065	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LGL90_10070	COG1399	metal-binding, possibly nucleic acid-binding protein
LGL90_10075	COG0424	maF-like protein
LGL90_10080	COG0564	pseudouridine synthase activity
LGL90_10085	COG1530	ribonuclease E activity
LGL90_10095	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LGL90_10100	COG0418	dihydroorotase activity
LGL90_10125	COG0628	permease
LGL90_10135	COG1560	Kdo2-lipid A biosynthetic process
LGL90_10150	COG0346	lactoylglutathione lyase activity
LGL90_10155	COG2943	transferase activity, transferring hexosyl groups
LGL90_10160	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LGL90_10180	COG0288	reversible hydration of carbon dioxide
LGL90_10190	COG2920	part of a sulfur-relay system
LGL90_10195	COG1254	Belongs to the acylphosphatase family
LGL90_10200	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LGL90_10205	COG3785	DNA binding
LGL90_10210	COG1832	CoA-binding protein
LGL90_10220	COG1803	Methylglyoxal synthase
LGL90_10225	COG0210	DNA helicase
LGL90_10230	COG3304	Inner membrane component domain
LGL90_10235	COG1289	transmembrane transporter activity
LGL90_10240	COG3070	regulator of competence-specific genes
LGL90_10245	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
LGL90_10255	COG3120	sequence-specific DNA binding
LGL90_10260	COG1067	ATP-dependent peptidase activity
LGL90_10265	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LGL90_10270	COG3130	regulation of translation
LGL90_10275	COG3009	Protein conserved in bacteria
LGL90_10280	COG3008	intermembrane lipid transfer
LGL90_10280	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LGL90_10285	COG2995	paraquat-inducible protein a
LGL90_10290	COG0488	(ABC) transporter
LGL90_10295	COG0116	Belongs to the methyltransferase superfamily
LGL90_10295	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LGL90_10300	COG3217	Mosc domain protein beta barrel domain protein
LGL90_10300	COG0633	Ferredoxin
LGL90_10310	COG0167	dihydroorotate dehydrogenase activity
LGL90_10315	COG0308	aminopeptidase N
LGL90_10320	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LGL90_10335	COG1448	Aminotransferase
LGL90_10340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LGL90_10345	COG3108	Peptidase M15
LGL90_10350	COG2989	Protein conserved in bacteria
LGL90_10355	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LGL90_10365	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
LGL90_10370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LGL90_10375	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LGL90_10380	COG3173	Aminoglycoside phosphotransferase
LGL90_10385	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LGL90_10390	COG2835	tetraacyldisaccharide 4'-kinase activity
LGL90_10395	COG1278	Cold shock
LGL90_10405	COG5383	Protein conserved in bacteria
LGL90_10410	COG1663	tetraacyldisaccharide 4'-kinase activity
LGL90_10420	COG2333	competence protein COMEC
LGL90_10420	COG0658	competence protein
LGL90_10430	COG0539	negative regulation of cytoplasmic translation
LGL90_10440	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LGL90_10450	COG0252	asparaginase activity
LGL90_10455	COG1944	ATP diphosphatase activity
LGL90_10460	COG2116	formate transmembrane transporter activity
LGL90_10465	COG1882	Formate acetyltransferase
LGL90_10470	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LGL90_10475	COG2814	Major facilitator Superfamily
LGL90_10480	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LGL90_10485	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LGL90_10490	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LGL90_10495	COG3107	peptidoglycan biosynthetic process
LGL90_10495	COG1674	ftsk spoiiie
LGL90_10500	COG1522	sequence-specific DNA binding
LGL90_10505	COG0492	ferredoxin-NADP+ reductase activity
LGL90_10515	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LGL90_10525	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LGL90_10530	COG0542	response to heat
LGL90_10535	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LGL90_10540	COG1278	Cold shock
LGL90_10550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL90_10555	COG2990	Protein conserved in bacteria
LGL90_10560	COG3593	DNA synthesis involved in DNA repair
LGL90_10565	COG2431	L-lysine efflux transmembrane transporter activity
LGL90_10570	COG1151	hydroxylamine reductase activity
LGL90_10575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LGL90_10580	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LGL90_10585	COG0702	epimerase
LGL90_10590	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL90_10595	COG0393	Putative heavy-metal-binding
LGL90_10605	COG1126	abc transporter atp-binding protein
LGL90_10610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_10615	COG4215	(ABC) transporter
LGL90_10620	COG4160	amino acid transport
LGL90_10625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_10640	COG1177	transmembrane transport
LGL90_10645	COG1176	ABC-type spermidine putrescine transport system, permease component I
LGL90_10650	COG3842	ATPase activity
LGL90_10655	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LGL90_10675	COG0569	domain protein
LGL90_10675	COG2985	domain, Protein
LGL90_10685	COG0671	phosphoesterase, PA-phosphatase related
LGL90_10690	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LGL90_10695	COG1349	DNA-binding transcription factor activity
LGL90_10700	COG0814	amino acid
LGL90_10705	COG1760	l-serine dehydratase
LGL90_10710	COG1686	Belongs to the peptidase S11 family
LGL90_10720	COG0626	cystathionine gamma-synthase activity
LGL90_10735	COG0625	glutathione transferase activity
LGL90_10740	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL90_10755	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LGL90_10760	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LGL90_10765	COG0131	Imidazoleglycerol-phosphate dehydratase
LGL90_10765	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LGL90_10775	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LGL90_10785	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LGL90_10785	COG0140	phosphoribosyl-ATP diphosphatase activity
LGL90_10795	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LGL90_10800	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LGL90_10805	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LGL90_10810	COG1253	flavin adenine dinucleotide binding
LGL90_10815	COG3069	C4-dicarboxylate transmembrane transporter activity
LGL90_10820	COG2982	Protein involved in outer membrane biogenesis
LGL90_10825	COG0717	Belongs to the dCTP deaminase family
LGL90_10830	COG0572	uridine kinase
LGL90_10835	COG0489	protein tyrosine kinase activity
LGL90_10840	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LGL90_10840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LGL90_10850	COG1380	Effector of murein hydrolase LrgA
LGL90_10855	COG1346	cytolysis
LGL90_10865	COG0583	DNA-binding transcription factor activity
LGL90_10875	COG0281	malic enzyme
LGL90_10880	COG2949	membrane
LGL90_10905	COG2311	Membrane
LGL90_10910	COG0302	gtp cyclohydrolase
LGL90_10915	COG0477	Major facilitator Superfamily
LGL90_10920	COG0583	DNA-binding transcription factor activity
LGL90_10940	COG0303	'Molybdopterin
LGL90_10945	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LGL90_10950	COG0488	(ABC) transporter
LGL90_10955	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LGL90_10960	COG2239	Acts as a magnesium transporter
LGL90_10965	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LGL90_10985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_10990	COG0765	amino acid transport
LGL90_10995	COG1126	abc transporter atp-binding protein
LGL90_11000	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LGL90_11005	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LGL90_11020	COG0697	spore germination
LGL90_11030	COG1982	Orn Lys Arg decarboxylase major
LGL90_11035	COG0531	amino acid
LGL90_11040	COG1174	glycine betaine transport
LGL90_11045	COG1125	glycine betaine transport
LGL90_11050	COG1174	glycine betaine transport
LGL90_11055	COG1732	Glycine betaine
LGL90_11060	COG2897	thiosulfate sulfurtransferase activity
LGL90_11065	COG4807	Protein conserved in bacteria
LGL90_11070	COG3639	organic phosphonate transmembrane transporter activity
LGL90_11080	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LGL90_11090	COG2261	transglycosylase associated protein
LGL90_11110	COG0277	FAD linked oxidase domain protein
LGL90_11115	COG1686	Belongs to the peptidase S11 family
LGL90_11125	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LGL90_11130	COG0513	Belongs to the DEAD box helicase family
LGL90_11135	COG1309	transcriptional regulator
LGL90_11140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL90_11145	COG1131	(ABC) transporter
LGL90_11150	COG0842	Transport permease protein
LGL90_11155	COG0842	Transport permease protein
LGL90_11160	COG0670	Belongs to the BI1 family
LGL90_11165	COG0314	molybdopterin synthase activity
LGL90_11170	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LGL90_11180	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LGL90_11185	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LGL90_11190	COG1120	ATPase activity
LGL90_11195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LGL90_11210	COG4628	conserved protein (DUF2132)
LGL90_11215	COG0556	nucleotide-excision repair
LGL90_11230	COG2226	methyltransferase
LGL90_11235	COG0156	8-amino-7-oxononanoate synthase activity
LGL90_11250	COG2706	6-phosphogluconolactonase activity
LGL90_11255	COG0561	phosphatase activity
LGL90_11265	COG4149	molybdate abc transporter
LGL90_11270	COG0725	ABC transporter, periplasmic molybdate-binding protein
LGL90_11280	COG2005	Transcriptional regulator
LGL90_11280	COG3585	molybdate ion transport
LGL90_11295	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LGL90_11300	COG1085	galactose-1-phosphate uridylyltransferase
LGL90_11310	COG2017	converts alpha-aldose to the beta-anomer
LGL90_11320	COG0588	phosphoglycerate mutase activity
LGL90_11325	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL90_11335	COG2205	protein histidine kinase activity
LGL90_11335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_11345	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LGL90_11375	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LGL90_11380	COG2885	chlorophyll binding
LGL90_11385	COG0823	Involved in the tonB-independent uptake of proteins
LGL90_11390	COG3064	Membrane
LGL90_11390	COG3064	Membrane
LGL90_11395	COG0848	biopolymer transport protein
LGL90_11400	COG0811	peptide transport
LGL90_11405	COG0824	Thioesterase
LGL90_11410	COG3790	cyd operon protein YbgE
LGL90_11415	COG4890	Cyd operon protein YbgT
LGL90_11420	COG1294	oxidase, subunit
LGL90_11425	COG1271	oxidase subunit
LGL90_11430	COG0737	Belongs to the 5'-nucleotidase family
LGL90_11435	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LGL90_11440	COG0045	succinate-CoA ligase (ADP-forming) activity
LGL90_11445	COG0508	dehydrogenase complex catalyzes the overall conversion of
LGL90_11450	COG0567	Dehydrogenase, E1 component
LGL90_11455	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LGL90_11460	COG1053	succinate dehydrogenase
LGL90_11465	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LGL90_11500	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LGL90_11505	COG1984	allophanate hydrolase subunit 2
LGL90_11510	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LGL90_11515	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LGL90_11520	COG5212	phosphodiesterase
LGL90_11525	COG0415	Belongs to the DNA photolyase family
LGL90_11530	COG3272	Protein of unknown function (DUF1722)
LGL90_11550	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LGL90_11555	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LGL90_11560	COG2205	protein histidine kinase activity
LGL90_11565	COG0745	RESPONSE REGULATOR receiver
LGL90_11575	COG0033	Phosphoglucomutase
LGL90_11580	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LGL90_11585	COG0596	Alpha beta hydrolase
LGL90_11595	COG0840	transmembrane signaling receptor activity
LGL90_11605	COG0735	belongs to the Fur family
LGL90_11630	COG1263	PTS System
LGL90_11630	COG2190	(PTS) system
LGL90_11630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_11640	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LGL90_11645	COG1846	Transcriptional regulator
LGL90_11645	COG1940	carbohydrate kinase activity
LGL90_11650	COG0647	UMP catabolic process
LGL90_11655	COG0367	asparagine synthase
LGL90_11690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LGL90_11695	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LGL90_11700	COG1702	phosphate starvation-inducible protein PhoH
LGL90_11705	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LGL90_11710	COG4535	Mg2 and Co2 transporter CorC
LGL90_11715	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LGL90_11725	COG0765	amino acid transport
LGL90_11730	COG0765	amino acid transport
LGL90_11735	COG1126	abc transporter atp-binding protein
LGL90_11740	COG2888	peptidyl-tyrosine sulfation
LGL90_11750	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LGL90_11755	COG1466	dna polymerase III delta subunit
LGL90_11760	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LGL90_11765	COG0799	negative regulation of ribosome biogenesis
LGL90_11770	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LGL90_11775	COG0768	penicillin binding
LGL90_11780	COG0772	Belongs to the SEDS family
LGL90_11785	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LGL90_11790	COG1686	Belongs to the peptidase S11 family
LGL90_11795	COG2921	Belongs to the UPF0250 family
LGL90_11805	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LGL90_11815	COG3706	GGDEF domain
LGL90_11835	COG1278	Cold shock
LGL90_11840	COG2197	response regulator
LGL90_11870	COG1309	transcriptional regulator
LGL90_11885	COG3250	beta-galactosidase activity
LGL90_11905	COG1215	transferase activity, transferring glycosyl groups
LGL90_11915	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LGL90_11945	COG3038	cytochrome b561
LGL90_11970	COG1022	Amp-dependent synthetase and ligase
LGL90_11980	COG1393	Belongs to the ArsC family
LGL90_11985	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LGL90_12000	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LGL90_12005	COG2501	S4 domain
LGL90_12035	COG3121	Chaperone
LGL90_12040	COG3188	usher protein
LGL90_12065	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LGL90_12070	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LGL90_12075	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LGL90_12080	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LGL90_12085	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LGL90_12090	COG4181	ATPase activity
LGL90_12095	COG2755	lipolytic protein G-D-S-L family
LGL90_12100	COG0300	oxidoreductase activity
LGL90_12105	COG3118	belongs to the thioredoxin family
LGL90_12110	COG0330	HflC and HflK could
LGL90_12115	COG1585	Membrane protein implicated in regulation of membrane protease activity
LGL90_12120	COG0789	Transcriptional regulator
LGL90_12125	COG2217	Heavy metal translocating P-type atpase
LGL90_12130	COG3735	TraB family
LGL90_12135	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LGL90_12140	COG0737	Belongs to the 5'-nucleotidase family
LGL90_12145	COG4651	solute:proton antiporter activity
LGL90_12145	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LGL90_12150	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LGL90_12155	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LGL90_12170	COG0326	Molecular chaperone. Has ATPase activity
LGL90_12175	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LGL90_12215	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LGL90_12220	COG2832	Protein of unknown function (DUF454)
LGL90_12235	COG3264	Mechanosensitive ion channel
LGL90_12235	COG1196	nuclear chromosome segregation
LGL90_12240	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LGL90_12245	COG1309	transcriptional regulator
LGL90_12250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL90_12255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL90_12260	COG0254	rRNA binding
LGL90_12265	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LGL90_12310	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LGL90_12315	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LGL90_12360	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LGL90_12365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LGL90_12365	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LGL90_12385	COG3695	enzyme binding
LGL90_12390	COG1946	Acyl-CoA thioesterase
LGL90_12400	COG0347	Belongs to the P(II) protein family
LGL90_12405	COG1132	(ABC) transporter
LGL90_12410	COG1132	(ABC) transporter
LGL90_12415	COG1522	sequence-specific DNA binding
LGL90_12430	COG4533	DNA binding
LGL90_12435	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LGL90_12440	COG0824	Thioesterase
LGL90_12445	COG1555	photosystem II stabilization
LGL90_12450	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LGL90_12455	COG0776	regulation of translation
LGL90_12460	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LGL90_12465	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LGL90_12470	COG0740	serine-type endopeptidase activity
LGL90_12480	COG0271	Belongs to the BolA IbaG family
LGL90_12485	COG3056	Lipoprotein
LGL90_12490	COG2223	nitrite transmembrane transporter activity
LGL90_12500	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LGL90_12505	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LGL90_12510	COG1845	cytochrome c oxidase, subunit III
LGL90_12515	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LGL90_12525	COG2814	Major facilitator Superfamily
LGL90_12530	COG1666	GTP binding
LGL90_12535	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LGL90_12540	COG0693	protein deglycase activity
LGL90_12575	COG0142	geranyltranstransferase activity
LGL90_12580	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LGL90_12585	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LGL90_12590	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LGL90_12600	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LGL90_12605	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LGL90_12605	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LGL90_12610	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LGL90_12615	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LGL90_12620	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LGL90_12625	COG1862	Preprotein translocase
LGL90_12640	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LGL90_12645	COG0450	alkyl hydroperoxide reductase
LGL90_12650	COG0300	oxidoreductase activity
LGL90_12655	COG0366	Alpha amylase catalytic
LGL90_12660	COG1113	amino acid transport
LGL90_12675	COG5002	protein histidine kinase activity
LGL90_12680	COG0745	RESPONSE REGULATOR receiver
LGL90_12685	COG0420	3'-5' exonuclease activity
LGL90_12690	COG0419	ATPase involved in DNA repair
LGL90_12695	COG1940	carbohydrate kinase activity
LGL90_12700	COG2974	May be involved in recombination
LGL90_12710	COG4126	flavin adenine dinucleotide binding
LGL90_12730	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LGL90_12765	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LGL90_12780	COG1073	alpha beta
LGL90_12785	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LGL90_12790	COG2195	Cleaves the N-terminal amino acid of tripeptides
LGL90_12795	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LGL90_12805	COG2991	Protein conserved in bacteria
LGL90_12810	COG1477	protein flavinylation
LGL90_12820	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL90_12825	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL90_12830	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LGL90_12835	COG1805	sodium ion transport
LGL90_12845	COG3034	peptidoglycan biosynthetic process
LGL90_12850	COG0121	glutamine amidotransferase
LGL90_12855	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LGL90_12860	COG1960	acyl-CoA dehydrogenase activity
LGL90_12870	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LGL90_12880	COG2226	methyltransferase
LGL90_12890	COG1388	LysM domain
LGL90_12890	COG0741	lytic transglycosylase activity
LGL90_12895	COG3021	interspecies interaction between organisms
LGL90_12930	COG0542	response to heat
LGL90_12935	COG1496	oxidoreductase activity
LGL90_12940	COG0564	pseudouridine synthase activity
LGL90_12945	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LGL90_12950	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LGL90_12960	COG0077	Prephenate dehydratase
LGL90_12960	COG1605	Chorismate mutase
LGL90_12965	COG1605	Chorismate mutase
LGL90_12965	COG0287	Prephenate dehydrogenase
LGL90_12970	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LGL90_12975	COG3279	Response regulator of the LytR AlgR family
LGL90_12980	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LGL90_12985	COG3137	Salt-induced outer membrane protein
LGL90_12990	COG0335	large ribosomal subunit rRNA binding
LGL90_12995	COG0336	Belongs to the RNA methyltransferase TrmD family
LGL90_13000	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LGL90_13010	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LGL90_13015	COG4137	Cytochrome C assembly protein
LGL90_13020	COG4536	flavin adenine dinucleotide binding
LGL90_13025	COG1854	S-ribosylhomocysteine lyase activity
LGL90_13030	COG2918	glutathione biosynthetic process
LGL90_13035	COG1238	metal cluster binding
LGL90_13040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LGL90_13075	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LGL90_13080	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LGL90_13085	COG2137	regulation of response to DNA damage stimulus
LGL90_13090	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LGL90_13105	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LGL90_13105	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LGL90_13130	COG3031	protein transport across the cell outer membrane
LGL90_13140	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL90_13185	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LGL90_13195	COG3397	chitin binding
LGL90_13215	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LGL90_13355	COG0741	lytic transglycosylase activity
LGL90_13375	COG0784	Response regulator, receiver
LGL90_13375	COG2205	protein histidine kinase activity
LGL90_13385	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LGL90_13390	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LGL90_13395	COG1388	LysM domain
LGL90_13395	COG4942	peptidase
LGL90_13405	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LGL90_13410	COG0585	pseudouridine synthase activity
LGL90_13415	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
LGL90_13425	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LGL90_13435	COG0529	Catalyzes the synthesis of activated sulfate
LGL90_13440	COG2895	sulfate adenylyltransferase (ATP) activity
LGL90_13445	COG0175	sulfate reduction
LGL90_13450	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LGL90_13450	COG1648	precorrin-2 dehydrogenase activity
LGL90_13455	COG2234	aminopeptidase activity
LGL90_13470	COG0175	sulfate reduction
LGL90_13480	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LGL90_13485	COG0720	synthase
LGL90_13490	COG0602	queuosine metabolic process
LGL90_13500	COG0504	CTP synthase activity
LGL90_13505	COG3956	TIGRFAM MazG family protein
LGL90_13510	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LGL90_13515	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LGL90_13525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LGL90_13530	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LGL90_13535	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LGL90_13545	COG2860	membrane
LGL90_13550	COG0316	Belongs to the HesB IscA family
LGL90_13560	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LGL90_13565	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LGL90_13570	COG1643	Atp-dependent helicase
LGL90_13575	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LGL90_13580	COG1489	DNA binding
LGL90_13595	COG0617	tRNA 3'-terminal CCA addition
LGL90_13600	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LGL90_13605	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LGL90_13610	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LGL90_13615	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LGL90_13620	COG0726	polysaccharide deacetylase
LGL90_13625	COG0842	Transport permease protein
LGL90_13630	COG1131	(ABC) transporter
LGL90_13635	COG0288	reversible hydration of carbon dioxide
LGL90_13645	COG2132	Multicopper oxidase
LGL90_13655	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LGL90_13670	COG3112	Uncharacterised protein family (UPF0231)
LGL90_13675	COG1049	propionate catabolic process, 2-methylcitrate cycle
LGL90_13685	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL90_13690	COG0508	dehydrogenase complex catalyzes the overall conversion of
LGL90_13695	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LGL90_13700	COG2186	Transcriptional regulator
LGL90_13705	COG1113	amino acid transport
LGL90_13715	COG3725	Membrane protein required for beta-lactamase induction
LGL90_13730	COG4969	Belongs to the N-Me-Phe pilin family
LGL90_13735	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LGL90_13740	COG1459	type II secretion system
LGL90_13745	COG0516	GMP reductase activity
LGL90_13765	COG0494	nUDIX hydrolase
LGL90_13790	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LGL90_13795	COG0849	cell division
LGL90_13810	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LGL90_13815	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LGL90_13820	COG0772	Belongs to the SEDS family
LGL90_13835	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LGL90_13840	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LGL90_13845	COG0768	penicillin binding
LGL90_13850	COG3116	cell division
LGL90_13855	COG0275	rRNA processing
LGL90_13870	COG0675	Transposase, IS605 OrfB family
LGL90_13890	COG0028	Belongs to the TPP enzyme family
LGL90_13895	COG1022	Amp-dependent synthetase and ligase
LGL90_13910	COG0473	3-isopropylmalate dehydrogenase activity
LGL90_13915	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LGL90_13925	COG2814	Major facilitator Superfamily
LGL90_13940	COG4143	(ABC) transporter
LGL90_13945	COG1178	ABC-type Fe3 transport system permease component
LGL90_13955	COG0586	Pfam SNARE associated Golgi protein
LGL90_13960	COG0417	DNA replication proofreading
LGL90_13965	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LGL90_13970	COG0564	pseudouridine synthase activity
LGL90_13980	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LGL90_13990	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LGL90_13995	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LGL90_14000	COG2967	ApaG domain
LGL90_14025	COG2966	Psort location CytoplasmicMembrane, score
LGL90_14035	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LGL90_14050	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LGL90_14055	COG1047	Peptidyl-prolyl cis-trans
LGL90_14060	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LGL90_14070	COG0196	riboflavin kinase activity
LGL90_14080	COG0583	DNA-binding transcription factor activity
LGL90_14085	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LGL90_14095	COG0443	Heat shock 70 kDa protein
LGL90_14100	COG1584	GPR1 FUN34 yaaH family protein
LGL90_14115	COG0521	Mo-molybdopterin cofactor biosynthetic process
LGL90_14120	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LGL90_14155	COG0745	RESPONSE REGULATOR receiver
LGL90_14160	COG3045	CreA protein
LGL90_14165	COG2207	Transcriptional regulator
LGL90_14165	COG3708	Transcriptional regulator
LGL90_14170	COG0406	alpha-ribazole phosphatase activity
LGL90_14175	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LGL90_14180	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LGL90_14185	COG0741	lytic transglycosylase activity
LGL90_14205	COG0488	(ABC) transporter
LGL90_14220	COG0560	Phosphoserine phosphatase
LGL90_14225	COG3726	membrane protein affecting hemolysin expression
LGL90_14235	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LGL90_14250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LGL90_14255	COG0084	hydrolase, TatD family'
LGL90_14260	COG4667	esterase of the alpha-beta hydrolase superfamily
LGL90_14270	COG2823	Periplasmic or secreted lipoprotein
LGL90_14285	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
LGL90_14325	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
LGL90_14325	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LGL90_14325	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LGL90_14330	COG1461	Dihydroxyacetone kinase
LGL90_14335	COG2376	Dihydroxyacetone kinase
LGL90_14345	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LGL90_14350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LGL90_14365	COG0859	PFAM glycosyl transferase family 9
LGL90_14390	COG3119	arylsulfatase activity
LGL90_14395	COG0641	radical SAM
LGL90_14405	COG1028	Short-chain dehydrogenase reductase Sdr
LGL90_14415	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LGL90_14425	COG3716	PTS system mannose fructose sorbose family IID component
LGL90_14430	COG3715	PTS system
LGL90_14435	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LGL90_14440	COG2222	sugar isomerase
LGL90_14450	COG1349	DNA-binding transcription factor activity
LGL90_14455	COG3119	arylsulfatase activity
LGL90_14475	COG5492	domain, Protein
LGL90_14565	COG3077	Addiction module antitoxin, RelB DinJ family
LGL90_14575	COG0582	viral genome integration into host DNA
LGL90_14585	COG0795	lipopolysaccharide-transporting ATPase activity
LGL90_14590	COG0795	lipopolysaccharide-transporting ATPase activity
LGL90_14595	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LGL90_14600	COG2927	DNA polymerase III (CHI subunit)
LGL90_14615	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LGL90_14635	COG3624	Phosphonate C-P lyase system protein PhnG
LGL90_14640	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LGL90_14645	COG3626	phosphonate metabolism
LGL90_14650	COG3627	carbon phosphorus lyase activity
LGL90_14655	COG4107	phosphonate C-P lyase system protein PhnK
LGL90_14660	COG4778	phosphonate C-P lyase system protein PhnL
LGL90_14665	COG3454	Phosphonate metabolism
LGL90_14670	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
LGL90_14675	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LGL90_14680	COG0702	epimerase
LGL90_14685	COG3787	Belongs to the UPF0306 family
LGL90_14695	COG1982	Orn Lys Arg decarboxylase major
LGL90_14700	COG0531	amino acid
LGL90_14705	COG2827	Endonuclease containing a URI domain
LGL90_14710	COG3153	acetyltransferase
LGL90_14715	COG3154	lipid carrier protein
LGL90_14720	COG0826	peptidase U32
LGL90_14725	COG0826	peptidase U32
LGL90_14735	COG0814	amino acid
LGL90_14740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LGL90_14745	COG0513	Belongs to the DEAD box helicase family
LGL90_14760	COG1185	polyribonucleotide nucleotidyltransferase activity
LGL90_14775	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LGL90_14785	COG0195	Participates in both transcription termination and antitermination
LGL90_14805	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LGL90_14810	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LGL90_14815	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LGL90_14825	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LGL90_14830	COG1534	Rna-binding protein
LGL90_14840	COG2027	D-alanyl-D-alanine carboxypeptidase
LGL90_14845	COG0745	RESPONSE REGULATOR receiver
LGL90_14850	COG0642	Histidine kinase
LGL90_14855	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LGL90_14860	COG0697	spore germination
LGL90_14875	COG0142	geranyltranstransferase activity
LGL90_14890	COG3423	Transcriptional regulator
LGL90_14905	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LGL90_14915	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LGL90_14920	COG2105	PFAM AIG2 family protein
LGL90_14925	COG2911	Protein conserved in bacteria
LGL90_14930	COG0729	surface antigen
LGL90_14935	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LGL90_14940	COG1253	flavin adenine dinucleotide binding
LGL90_14950	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LGL90_14955	COG1218	3'(2'),5'-bisphosphate nucleotidase
LGL90_14960	COG0737	Belongs to the 5'-nucleotidase family
LGL90_14970	COG0545	Peptidyl-prolyl cis-trans isomerase
LGL90_14975	COG3061	Opacity-associated protein A
LGL90_14980	COG0359	binds to the 23S rRNA
LGL90_14985	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LGL90_14990	COG2965	DNA replication, synthesis of RNA primer
LGL90_14995	COG0360	Binds together with S18 to 16S ribosomal RNA
LGL90_15005	COG1073	alpha beta
LGL90_15025	COG3188	usher protein
LGL90_15030	COG3121	Chaperone
LGL90_15050	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL90_15055	COG0557	exoribonuclease II activity
LGL90_15060	COG1959	2 iron, 2 sulfur cluster binding
LGL90_15065	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LGL90_15070	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LGL90_15075	COG0330	HflC and HflK could
LGL90_15080	COG0330	HflC and HflK could
LGL90_15085	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LGL90_15095	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LGL90_15105	COG0860	N-Acetylmuramoyl-L-alanine amidase
LGL90_15110	COG0802	atpase or kinase
LGL90_15115	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LGL90_15115	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LGL90_15120	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LGL90_15140	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LGL90_15145	COG1162	GTPase activity
LGL90_15150	COG0688	phosphatidylethanolamine metabolic process
LGL90_15155	COG3264	Mechanosensitive ion channel
LGL90_15155	COG1511	domain protein
LGL90_15160	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LGL90_15165	COG1053	succinate dehydrogenase
LGL90_15170	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LGL90_15175	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LGL90_15180	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LGL90_15200	COG3188	usher protein
LGL90_15220	COG3397	chitin binding
LGL90_15230	COG1509	lysine 2,3-aminomutase activity
LGL90_15260	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LGL90_15270	COG4232	protein-disulfide reductase activity
LGL90_15275	COG1309	transcriptional regulator
LGL90_15285	COG1301	dicarboxylic acid transport
LGL90_15290	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LGL90_15295	COG3162	membrane
LGL90_15300	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LGL90_15325	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LGL90_15330	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LGL90_15335	COG1739	Uncharacterized protein family UPF0029
LGL90_15345	COG1024	Enoyl-CoA hydratase
LGL90_15345	COG1250	3-hydroxyacyl-CoA dehydrogenase
LGL90_15355	COG0543	2 iron, 2 sulfur cluster binding
LGL90_15370	COG0250	Participates in transcription elongation, termination and antitermination
LGL90_15385	COG0805	protein transport
LGL90_15390	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LGL90_15395	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LGL90_15400	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LGL90_15405	COG3165	ubiquinone biosynthetic process from chorismate
LGL90_15410	COG2226	methyltransferase
LGL90_15415	COG1322	Protein conserved in bacteria
LGL90_15420	COG0586	Pfam SNARE associated Golgi protein
LGL90_15425	COG1966	Carbon starvation protein
LGL90_15440	COG0412	Dienelactone hydrolase
LGL90_15445	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LGL90_15450	COG0583	DNA-binding transcription factor activity
LGL90_15455	COG0697	spore germination
LGL90_15465	COG0584	glycerophosphoryl diester phosphodiesterase
LGL90_15475	COG0395	ABC-type sugar transport system, permease component
LGL90_15480	COG1175	transmembrane transport
LGL90_15485	COG1653	transport
LGL90_15520	COG0410	ABC transporter
LGL90_15530	COG4177	L-phenylalanine transmembrane transporter activity
LGL90_15550	COG1929	Belongs to the glycerate kinase type-1 family
LGL90_15555	COG2610	gluconate transmembrane transporter activity
LGL90_15560	COG3835	regulator
LGL90_15570	COG2177	Part of the ABC transporter FtsEX involved in
LGL90_15575	COG2884	Cell division ATP-binding protein ftsE
LGL90_15580	COG0552	protein localization to endoplasmic reticulum
LGL90_15580	COG0552	protein localization to endoplasmic reticulum
LGL90_15585	COG0742	ribosomal rna small subunit methyltransferase
LGL90_15590	COG3776	membrane
LGL90_15605	COG3714	YhhN family
LGL90_15620	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LGL90_15630	COG0247	lactate metabolic process
LGL90_15640	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LGL90_15650	COG2271	Major facilitator Superfamily
LGL90_15655	COG0584	glycerophosphoryl diester phosphodiesterase
LGL90_15660	COG0561	phosphatase activity
LGL90_15665	COG2267	carboxylic ester hydrolase activity
LGL90_15670	COG1280	lysine exporter protein (LysE YggA)
LGL90_15675	COG0514	ATP-dependent DNA helicase (RecQ)
LGL90_15680	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
LGL90_15685	COG2050	protein possibly involved in aromatic compounds catabolism
LGL90_15705	COG5564	TIM-barrel signal transduction protein
LGL90_15710	COG5441	Belongs to the UPF0261 family
LGL90_15720	COG0210	DNA helicase
LGL90_15725	COG1011	Hydrolase
LGL90_15730	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LGL90_15735	COG3159	Protein conserved in bacteria
LGL90_15740	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LGL90_15745	COG5567	small periplasmic lipoprotein
LGL90_15755	COG3072	Adenylate cyclase
LGL90_15760	COG0181	hydroxymethylbilane synthase activity
LGL90_15765	COG1587	Uroporphyrinogen-III synthase
LGL90_15770	COG2959	enzyme of heme biosynthesis
LGL90_15775	COG3071	HemY protein
LGL90_15825	COG2244	polysaccharide biosynthetic process
LGL90_15830	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LGL90_15835	COG0456	acetyltransferase
LGL90_15840	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LGL90_15845	COG1088	dTDP-glucose 4,6-dehydratase activity
LGL90_15850	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LGL90_15855	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LGL90_15860	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LGL90_15865	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LGL90_15870	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LGL90_15875	COG3118	belongs to the thioredoxin family
LGL90_15885	COG0248	Ppx GppA phosphatase
LGL90_15895	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LGL90_15910	COG3397	chitin binding
LGL90_15920	COG0129	dihydroxy-acid dehydratase activity
LGL90_15930	COG3978	acetolactate synthase activity
LGL90_15950	COG3085	chromosome segregation
LGL90_15955	COG0583	DNA-binding transcription factor activity
LGL90_16035	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL90_16045	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LGL90_16045	COG0678	peroxiredoxin activity
LGL90_16050	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LGL90_16085	COG1629	transport
LGL90_16090	COG0165	Argininosuccinate lyase
LGL90_16095	COG0137	argininosuccinate synthase activity
LGL90_16100	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LGL90_16150	COG0460	homoserine dehydrogenase
LGL90_16150	COG0527	aspartate kinase activity
LGL90_16155	COG0626	cystathionine gamma-synthase activity
LGL90_16160	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
LGL90_16170	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LGL90_16175	COG1609	Transcriptional regulator
LGL90_16180	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LGL90_16185	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LGL90_16190	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LGL90_16195	COG1575	Belongs to the MenA family. Type 1 subfamily
LGL90_16200	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LGL90_16205	COG3074	FtsZ-dependent cytokinesis
LGL90_16210	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LGL90_16215	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LGL90_16220	COG1494	fructose-1,6-bisphosphatase
LGL90_16225	COG2814	Major facilitator Superfamily
LGL90_16235	COG3152	Membrane
LGL90_16250	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LGL90_16260	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LGL90_16265	COG3678	ATP-independent chaperone mediated protein folding
LGL90_16270	COG0745	RESPONSE REGULATOR receiver
LGL90_16275	COG2205	protein histidine kinase activity
LGL90_16280	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LGL90_16285	COG1045	serine acetyltransferase
LGL90_16290	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LGL90_16295	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LGL90_16300	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LGL90_16305	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LGL90_16310	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LGL90_16315	COG4942	peptidase
LGL90_16320	COG2861	carbohydrate metabolic process
LGL90_16335	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LGL90_16340	COG0859	PFAM glycosyl transferase family 9
LGL90_16345	COG0859	PFAM glycosyl transferase family 9
LGL90_16350	COG1519	Transferase
LGL90_16370	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LGL90_16375	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LGL90_16380	COG2003	Belongs to the UPF0758 family
LGL90_16385	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LGL90_16390	COG0756	dUTP diphosphatase activity
LGL90_16395	COG1309	transcriptional regulator
LGL90_16400	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LGL90_16405	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LGL90_16410	COG1561	YicC-like family, N-terminal region
LGL90_16460	COG5001	Diguanylate cyclase
LGL90_16465	COG1024	Enoyl-CoA hydratase
LGL90_16485	COG2860	membrane
LGL90_16490	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LGL90_16500	COG1758	RNA polymerase activity
LGL90_16505	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LGL90_16510	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LGL90_16515	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LGL90_16520	COG0786	glutamate:sodium symporter activity
LGL90_16525	COG2233	PERMEase
LGL90_16530	COG2982	Protein involved in outer membrane biogenesis
LGL90_16535	COG0456	acetyltransferase
LGL90_16550	COG1011	Hydrolase
LGL90_16565	COG3852	Histidine kinase
LGL90_16575	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LGL90_16585	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LGL90_16590	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LGL90_16590	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LGL90_16595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LGL90_16600	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LGL90_16605	COG3084	Protein conserved in bacteria
LGL90_16615	COG1763	Mo-molybdopterin cofactor biosynthetic process
LGL90_16640	COG2186	Transcriptional regulator
LGL90_16645	COG1609	Transcriptional regulator
LGL90_16650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LGL90_16660	COG1172	Belongs to the binding-protein-dependent transport system permease family
LGL90_16665	COG1129	ABC transporter
LGL90_16670	COG1869	D-ribose catabolic process
LGL90_16675	COG3158	transport of potassium into the cell
LGL90_16680	COG0714	Associated with various cellular activities
LGL90_16685	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LGL90_16695	COG2502	aspartate--ammonia ligase
LGL90_16700	COG1522	sequence-specific DNA binding
LGL90_16705	COG0716	FMN binding
LGL90_16710	COG0445	tRNA wobble uridine modification
LGL90_16715	COG0357	Ribosomal RNA small subunit methyltransferase G
LGL90_16720	COG3312	ion transport
LGL90_16725	COG0356	it plays a direct role in the translocation of protons across the membrane
LGL90_16735	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LGL90_16745	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LGL90_16750	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LGL90_16760	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LGL90_16775	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LGL90_16780	COG0573	inorganic phosphate transmembrane transporter activity
LGL90_16785	COG0581	inorganic phosphate transmembrane transporter activity
LGL90_16795	COG0704	Plays a role in the regulation of phosphate uptake
LGL90_16800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LGL90_16805	COG0765	amino acid transport
LGL90_16810	COG0765	amino acid transport
LGL90_16815	COG2252	PERMEase
LGL90_16820	COG0840	transmembrane signaling receptor activity
LGL90_16830	COG3121	Chaperone
LGL90_16845	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LGL90_16850	COG0706	membrane insertase activity
LGL90_16860	COG0594	ribonuclease P activity
LGL90_16865	COG0230	Belongs to the bacterial ribosomal protein bL34 family