locus-tag class description LOR96_000005 PF00308 Bacterial dnaA protein LOR96_000005 PF08299 Bacterial dnaA protein helix-turn-helix LOR96_000005 PF11638 DnaA N-terminal domain LOR96_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain LOR96_000010 PF02767 DNA polymerase III beta subunit, central domain LOR96_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain LOR96_000015 PF02463 RecF/RecN/SMC N terminal domain LOR96_000020 PF01751 Toprim domain LOR96_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_000020 PF00986 DNA gyrase B subunit, carboxyl terminus LOR96_000020 PF00204 DNA gyrase B LOR96_000020 PF18053 DNA gyrase B subunit insert domain LOR96_000030 PF12566 Protein of unknown function (DUF3748) LOR96_000030 PF07676 WD40-like Beta Propeller Repeat LOR96_000035 PF07119 Protein of unknown function (DUF1375) LOR96_000040 PF00011 Hsp20/alpha crystallin family LOR96_000045 PF00011 Hsp20/alpha crystallin family LOR96_000050 PF02080 TrkA-C domain LOR96_000050 PF06826 Predicted Permease Membrane Region LOR96_000055 PF00155 Aminotransferase class I and II LOR96_000060 PF13488 Glycine zipper LOR96_000060 PF00691 OmpA family LOR96_000080 PF03352 Methyladenine glycosylase LOR96_000090 PF02091 Glycyl-tRNA synthetase alpha subunit LOR96_000095 PF05746 DALR anticodon binding domain LOR96_000095 PF02092 Glycyl-tRNA synthetase beta subunit LOR96_000100 PF11254 Protein of unknown function (DUF3053) LOR96_000130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOR96_000130 PF02378 Phosphotransferase system, EIIC LOR96_000130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LOR96_000135 PF01232 Mannitol dehydrogenase Rossmann domain LOR96_000135 PF08125 Mannitol dehydrogenase C-terminal domain LOR96_000140 PF05068 Mannitol repressor LOR96_000145 PF10928 Protein of unknown function (DUF2810) LOR96_000150 PF03473 MOSC domain LOR96_000150 PF03475 3-alpha domain LOR96_000155 PF02203 Tar ligand binding domain homologue LOR96_000155 PF00672 HAMP domain LOR96_000155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_000160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LOR96_000160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LOR96_000165 PF02634 FdhD/NarQ family LOR96_000175 PF09163 Formate dehydrogenase N, transmembrane LOR96_000175 PF13247 4Fe-4S dicluster domain LOR96_000180 PF01292 Prokaryotic cytochrome b561 LOR96_000185 PF04216 Protein involved in formate dehydrogenase formation LOR96_000190 PF03841 L-seryl-tRNA selenium transferase LOR96_000190 PF12390 Selenocysteine synthase N terminal LOR96_000195 PF09106 Elongation factor SelB, winged helix LOR96_000195 PF00009 Elongation factor Tu GTP binding domain LOR96_000195 PF09107 Elongation factor SelB, winged helix LOR96_000195 PF03144 Elongation factor Tu domain 2 LOR96_000200 PF01427 D-ala-D-ala dipeptidase LOR96_000205 PF07690 Major Facilitator Superfamily LOR96_000210 PF01757 Acyltransferase family LOR96_000220 PF13356 Arm DNA-binding domain LOR96_000220 PF14659 Phage integrase, N-terminal SAM-like domain LOR96_000220 PF00589 Phage integrase family LOR96_000230 PF04606 Ogr/Delta-like zinc finger LOR96_000255 PF17392 Urocanase C-terminal domain LOR96_000255 PF17391 Urocanase N-terminal domain LOR96_000255 PF01175 Urocanase Rossmann-like domain LOR96_000260 PF00221 Aromatic amino acid lyase LOR96_000265 PF00324 Amino acid permease LOR96_000275 PF12146 Serine aminopeptidase, S33 LOR96_000280 PF08019 Phosphoethanolamine transferase EptA/EptB LOR96_000280 PF00884 Sulfatase LOR96_000285 PF00196 Bacterial regulatory proteins, luxR family LOR96_000285 PF00072 Response regulator receiver domain LOR96_000290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_000290 PF07730 Histidine kinase LOR96_000290 PF05231 MASE1 LOR96_000295 PF07690 Major Facilitator Superfamily LOR96_000305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_000310 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_000315 PF12911 N-terminal TM domain of oligopeptide transport permease C LOR96_000315 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_000320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_000320 PF00005 ABC transporter LOR96_000325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_000325 PF00005 ABC transporter LOR96_000330 PF11658 Cellulose biosynthesis protein BcsG LOR96_000335 PF11120 Cellulose biosynthesis protein BcsF LOR96_000340 PF10995 Cellulose biosynthesis GIL LOR96_000350 PF06564 Cellulose biosynthesis protein BcsQ LOR96_000355 PF03552 Cellulose synthase LOR96_000355 PF07238 PilZ domain LOR96_000355 PF00535 Glycosyl transferase family 2 LOR96_000360 PF03170 Bacterial cellulose synthase subunit LOR96_000365 PF01270 Glycosyl hydrolases family 8 LOR96_000370 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LOR96_000375 PF00563 EAL domain LOR96_000375 PF17154 Gammaproteobacterial periplasmic sensor domain LOR96_000375 PF00990 Diguanylate cyclase, GGDEF domain LOR96_000375 PF00672 HAMP domain LOR96_000380 PF00375 Sodium:dicarboxylate symporter family LOR96_000385 PF00675 Insulinase (Peptidase family M16) LOR96_000385 PF05193 Peptidase M16 inactive domain LOR96_000390 PF00294 pfkB family carbohydrate kinase LOR96_000395 PF01361 Tautomerase enzyme LOR96_000400 PF00563 EAL domain LOR96_000405 PF02611 CDP-diacylglycerol pyrophosphatase LOR96_000410 PF03631 Virulence factor BrkB LOR96_000415 PF03466 LysR substrate binding domain LOR96_000415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_000420 PF00375 Sodium:dicarboxylate symporter family LOR96_000425 PF01053 Cys/Met metabolism PLP-dependent enzyme LOR96_000430 PF11924 Inverse autotransporter, beta-domain LOR96_000430 PF07979 Intimin C-type lectin domain LOR96_000430 PF02369 Bacterial Ig-like domain (group 1) LOR96_000430 PF09134 Invasin, domain 3 LOR96_000435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOR96_000435 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_000440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LOR96_000445 PF01432 Peptidase family M3 LOR96_000450 PF04445 Putative SAM-dependent methyltransferase LOR96_000455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LOR96_000455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LOR96_000460 PF00582 Universal stress protein family LOR96_000465 PF10625 Universal stress protein B (UspB) LOR96_000470 PF01384 Phosphate transporter family LOR96_000480 PF01810 LysE type translocator LOR96_000485 PF00583 Acetyltransferase (GNAT) family LOR96_000495 PF17954 Quercetinase C-terminal cupin domain LOR96_000495 PF02678 Pirin LOR96_000500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LOR96_000500 PF00356 Bacterial regulatory proteins, lacI family LOR96_000505 PF02447 GntP family permease LOR96_000510 PF01202 Shikimate kinase LOR96_000515 PF01914 MarC family integral membrane protein LOR96_000520 PF02774 Semialdehyde dehydrogenase, dimerisation domain LOR96_000520 PF01118 Semialdehyde dehydrogenase, NAD binding domain LOR96_000525 PF06580 Histidine kinase LOR96_000525 PF07694 5TMR of 5TMR-LYT LOR96_000530 PF02806 Alpha amylase, C-terminal all-beta domain LOR96_000530 PF00128 Alpha amylase, catalytic domain LOR96_000530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LOR96_000535 PF00128 Alpha amylase, catalytic domain LOR96_000535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LOR96_000535 PF18390 Glycogen debranching enzyme C-terminal domain LOR96_000540 PF00483 Nucleotidyl transferase LOR96_000545 PF00534 Glycosyl transferases group 1 LOR96_000545 PF08323 Starch synthase catalytic domain LOR96_000550 PF00343 Carbohydrate phosphorylase LOR96_000555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LOR96_000555 PF01266 FAD dependent oxidoreductase LOR96_000560 PF08220 DeoR-like helix-turn-helix domain LOR96_000560 PF00455 DeoR C terminal sensor domain LOR96_000565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LOR96_000565 PF01694 Rhomboid family LOR96_000570 PF00581 Rhodanese-like domain LOR96_000575 PF00196 Bacterial regulatory proteins, luxR family LOR96_000575 PF17874 MalT-like TPR region LOR96_000580 PF00343 Carbohydrate phosphorylase LOR96_000585 PF02446 4-alpha-glucanotransferase LOR96_000590 PF01106 NifU-like domain LOR96_000590 PF01521 Iron-sulphur cluster biosynthesis LOR96_000595 PF00156 Phosphoribosyl transferase domain LOR96_000600 PF00561 alpha/beta hydrolase fold LOR96_000610 PF09012 FeoC like transcriptional regulator LOR96_000615 PF07664 Ferrous iron transport protein B C terminus LOR96_000615 PF17910 FeoB cytosolic helical domain LOR96_000615 PF02421 Ferrous iron transport protein B LOR96_000615 PF07670 Nucleoside recognition LOR96_000620 PF04023 FeoA domain LOR96_000625 PF09371 Tex-like protein N-terminal domain LOR96_000625 PF16921 Tex protein YqgF-like domain LOR96_000625 PF17674 HHH domain LOR96_000625 PF00575 S1 RNA binding domain LOR96_000650 PF03449 Transcription elongation factor, N-terminal LOR96_000650 PF01272 Transcription elongation factor, GreA/GreB, C-term LOR96_000655 PF00486 Transcriptional regulatory protein, C terminal LOR96_000655 PF00072 Response regulator receiver domain LOR96_000660 PF00512 His Kinase A (phospho-acceptor) domain LOR96_000660 PF00672 HAMP domain LOR96_000660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_000665 PF01293 Phosphoenolpyruvate carboxykinase LOR96_000670 PF01430 Hsp33 protein LOR96_000675 PF01479 S4 domain LOR96_000680 PF13419 Haloacid dehalogenase-like hydrolase LOR96_000685 PF07095 Intracellular growth attenuator protein IgaA LOR96_000690 PF00293 NUDIX domain LOR96_000695 PF17092 Penicillin-binding protein OB-like domain LOR96_000695 PF00912 Transglycosylase LOR96_000695 PF00905 Penicillin binding protein transpeptidase domain LOR96_000720 PF00263 Bacterial type II and III secretion system protein LOR96_000720 PF03958 Bacterial type II/III secretion system short domain LOR96_000725 PF01202 Shikimate kinase LOR96_000730 PF01761 3-dehydroquinate synthase LOR96_000735 PF05036 Sporulation related domain LOR96_000740 PF02086 D12 class N6 adenine-specific DNA methyltransferase LOR96_000745 PF00834 Ribulose-phosphate 3 epimerase family LOR96_000750 PF13419 Haloacid dehalogenase-like hydrolase LOR96_000755 PF00579 tRNA synthetases class I (W and Y) LOR96_000760 PF14824 Sirohaem biosynthesis protein central LOR96_000760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOR96_000760 PF10414 Sirohaem synthase dimerisation region LOR96_000765 PF01226 Formate/nitrite transporter LOR96_000770 PF13806 Rieske-like [2Fe-2S] domain LOR96_000775 PF04324 BFD-like [2Fe-2S] binding domain LOR96_000775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LOR96_000775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LOR96_000775 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_000775 PF18267 Rubredoxin NAD+ reductase C-terminal domain LOR96_000780 PF07969 Amidohydrolase family LOR96_000785 PF07690 Major Facilitator Superfamily LOR96_000800 PF00356 Bacterial regulatory proteins, lacI family LOR96_000805 PF02056 Family 4 glycosyl hydrolase LOR96_000805 PF11975 Family 4 glycosyl hydrolase C-terminal domain LOR96_000810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LOR96_000815 PF00117 Glutamine amidotransferase class-I LOR96_000820 PF00202 Aminotransferase class-III LOR96_000825 PF12805 FUSC-like inner membrane protein yccS LOR96_000830 PF13545 Crp-like helix-turn-helix domain LOR96_000830 PF00027 Cyclic nucleotide-binding domain LOR96_000835 PF02566 OsmC-like protein LOR96_000855 PF00156 Phosphoribosyl transferase domain LOR96_000860 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_000865 PF00485 Phosphoribulokinase / Uridine kinase family LOR96_000870 PF06794 Uncharacterised protein family (UPF0270) LOR96_000875 PF00561 alpha/beta hydrolase fold LOR96_000880 PF01810 LysE type translocator LOR96_000885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOR96_000890 PF00535 Glycosyl transferase family 2 LOR96_000895 PF12848 ABC transporter LOR96_000895 PF00005 ABC transporter LOR96_000900 PF02525 Flavodoxin-like fold LOR96_000905 PF00999 Sodium/hydrogen exchanger family LOR96_000905 PF02254 TrkA-N domain LOR96_000910 PF09526 Probable metal-binding protein (DUF2387) LOR96_000915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOR96_000920 PF04102 SlyX LOR96_000925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOR96_000925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LOR96_000930 PF13309 HTH domain LOR96_000930 PF08348 YheO-like PAS domain LOR96_000935 PF02635 DsrE/DsrF-like family LOR96_000940 PF02635 DsrE/DsrF-like family LOR96_000945 PF04077 DsrH like protein LOR96_000950 PF00164 Ribosomal protein S12/S23 LOR96_000955 PF00177 Ribosomal protein S7p/S5e LOR96_000960 PF00679 Elongation factor G C-terminus LOR96_000960 PF14492 Elongation Factor G, domain II LOR96_000960 PF03764 Elongation factor G, domain IV LOR96_000960 PF00009 Elongation factor Tu GTP binding domain LOR96_000960 PF03144 Elongation factor Tu domain 2 LOR96_000965 PF00009 Elongation factor Tu GTP binding domain LOR96_000965 PF03144 Elongation factor Tu domain 2 LOR96_000965 PF03143 Elongation factor Tu C-terminal domain LOR96_000970 PF04324 BFD-like [2Fe-2S] binding domain LOR96_000975 PF00210 Ferritin-like domain LOR96_000980 PF00338 Ribosomal protein S10p/S20e LOR96_000985 PF00297 Ribosomal protein L3 LOR96_000990 PF00573 Ribosomal protein L4/L1 family LOR96_000995 PF00276 Ribosomal protein L23 LOR96_001000 PF00181 Ribosomal Proteins L2, RNA binding domain LOR96_001000 PF03947 Ribosomal Proteins L2, C-terminal domain LOR96_001005 PF00203 Ribosomal protein S19 LOR96_001010 PF00237 Ribosomal protein L22p/L17e LOR96_001015 PF07650 KH domain LOR96_001015 PF00189 Ribosomal protein S3, C-terminal domain LOR96_001020 PF00252 Ribosomal protein L16p/L10e LOR96_001025 PF00831 Ribosomal L29 protein LOR96_001030 PF00366 Ribosomal protein S17 LOR96_001035 PF00238 Ribosomal protein L14p/L23e LOR96_001040 PF00467 KOW motif LOR96_001040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LOR96_001045 PF00281 Ribosomal protein L5 LOR96_001045 PF00673 ribosomal L5P family C-terminus LOR96_001050 PF00253 Ribosomal protein S14p/S29e LOR96_001055 PF00410 Ribosomal protein S8 LOR96_001060 PF00347 Ribosomal protein L6 LOR96_001065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LOR96_001070 PF00333 Ribosomal protein S5, N-terminal domain LOR96_001070 PF03719 Ribosomal protein S5, C-terminal domain LOR96_001075 PF00327 Ribosomal protein L30p/L7e LOR96_001080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LOR96_001085 PF00344 SecY translocase LOR96_001090 PF00444 Ribosomal protein L36 LOR96_001095 PF00416 Ribosomal protein S13/S18 LOR96_001100 PF00411 Ribosomal protein S11 LOR96_001105 PF00163 Ribosomal protein S4/S9 N-terminal domain LOR96_001105 PF01479 S4 domain LOR96_001110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LOR96_001110 PF01000 RNA polymerase Rpb3/RpoA insert domain LOR96_001110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LOR96_001115 PF01196 Ribosomal protein L17 LOR96_001120 PF13411 MerR HTH family regulatory protein LOR96_001125 PF03889 Alternative ribosome-rescue factor A LOR96_001130 PF01741 Large-conductance mechanosensitive channel, MscL LOR96_001135 PF02080 TrkA-C domain LOR96_001135 PF02254 TrkA-N domain LOR96_001140 PF01189 16S rRNA methyltransferase RsmB/F LOR96_001140 PF01029 NusB family LOR96_001145 PF02911 Formyl transferase, C-terminal domain LOR96_001145 PF00551 Formyl transferase LOR96_001150 PF01327 Polypeptide deformylase LOR96_001155 PF02481 DNA recombination-mediator protein A LOR96_001155 PF17782 DprA winged helix domain LOR96_001160 PF04361 Protein of unknown function (DUF494) LOR96_001165 PF01396 Topoisomerase DNA binding C4 zinc finger LOR96_001170 PF01300 Telomere recombination LOR96_001175 PF01488 Shikimate / quinate 5-dehydrogenase LOR96_001175 PF08501 Shikimate dehydrogenase substrate binding domain LOR96_001175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LOR96_001180 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_001210 PF00474 Sodium:solute symporter family LOR96_001215 PF04341 Protein of unknown function, DUF485 LOR96_001220 PF16177 Acetyl-coenzyme A synthetase N-terminus LOR96_001220 PF00501 AMP-binding enzyme LOR96_001220 PF13193 AMP-binding enzyme C-terminal domain LOR96_001225 PF00375 Sodium:dicarboxylate symporter family LOR96_001235 PF04143 Sulphur transport LOR96_001240 PF01206 Sulfurtransferase TusA LOR96_001245 PF02719 Polysaccharide biosynthesis protein LOR96_001250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LOR96_001255 PF02350 UDP-N-acetylglucosamine 2-epimerase LOR96_001260 PF03102 NeuB family LOR96_001260 PF08666 SAF domain LOR96_001270 PF00483 Nucleotidyl transferase LOR96_001280 PF02348 Cytidylyltransferase LOR96_001280 PF13472 GDSL-like Lipase/Acylhydrolase family LOR96_001305 PF02540 NAD synthase LOR96_001305 PF00795 Carbon-nitrogen hydrolase LOR96_001310 PF00117 Glutamine amidotransferase class-I LOR96_001315 PF00977 Histidine biosynthesis protein LOR96_001320 PF08485 Polysaccharide biosynthesis protein C-terminal LOR96_001320 PF02719 Polysaccharide biosynthesis protein LOR96_001325 PF01370 NAD dependent epimerase/dehydratase family LOR96_001330 PF02350 UDP-N-acetylglucosamine 2-epimerase LOR96_001355 PF11412 Disulphide bond corrector protein DsbC LOR96_001355 PF02683 Cytochrome C biogenesis protein transmembrane region LOR96_001360 PF03091 CutA1 divalent ion tolerance protein LOR96_001365 PF03605 Anaerobic c4-dicarboxylate membrane transporter LOR96_001370 PF00206 Lyase LOR96_001370 PF10415 Fumarase C C-terminus LOR96_001375 PF04186 FxsA cytoplasmic membrane protein LOR96_001380 PF00166 Chaperonin 10 Kd subunit LOR96_001385 PF00118 TCP-1/cpn60 chaperonin family LOR96_001390 PF13698 Domain of unknown function (DUF4156) LOR96_001395 PF04055 Radical SAM superfamily LOR96_001400 PF09285 Elongation factor P, C-terminal LOR96_001400 PF08207 Elongation factor P (EF-P) KOW-like domain LOR96_001400 PF01132 Elongation factor P (EF-P) OB domain LOR96_001405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LOR96_001405 PF18416 N-acetylglucosamine binding protein domain 2 LOR96_001410 PF00196 Bacterial regulatory proteins, luxR family LOR96_001420 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_001420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_001425 PF00577 Outer membrane usher protein LOR96_001425 PF13953 PapC C-terminal domain LOR96_001425 PF13954 PapC N-terminal domain LOR96_001430 PF00419 Fimbrial protein LOR96_001435 PF00893 Small Multidrug Resistance protein LOR96_001440 PF08212 Lipocalin-like domain LOR96_001445 PF02313 Fumarate reductase subunit D LOR96_001450 PF02300 Fumarate reductase subunit C LOR96_001455 PF13085 2Fe-2S iron-sulfur cluster binding domain LOR96_001455 PF13183 4Fe-4S dicluster domain LOR96_001460 PF02910 Fumarate reductase flavoprotein C-term LOR96_001460 PF00890 FAD binding domain LOR96_001465 PF00152 tRNA synthetases class II (D, K and N) LOR96_001470 PF00924 Mechanosensitive ion channel LOR96_001470 PF12795 Mechanosensitive ion channel porin domain LOR96_001470 PF12794 Mechanosensitive ion channel inner membrane domain 1 LOR96_001475 PF02666 Phosphatidylserine decarboxylase LOR96_001480 PF03193 RsgA GTPase LOR96_001485 PF00929 Exonuclease LOR96_001505 PF08331 Domain of unknown function (DUF1730) LOR96_001510 PF03853 YjeF-related protein N-terminus LOR96_001510 PF01256 Carbohydrate kinase LOR96_001515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LOR96_001520 PF01520 N-acetylmuramoyl-L-alanine amidase LOR96_001525 PF01119 DNA mismatch repair protein, C-terminal domain LOR96_001525 PF08676 MutL C terminal dimerisation domain LOR96_001535 PF17209 Hfq protein LOR96_001540 PF16360 GTP-binding GTPase Middle Region LOR96_001540 PF13167 GTP-binding GTPase N-terminal LOR96_001540 PF01926 50S ribosome-binding GTPase LOR96_001545 PF01145 SPFH domain / Band 7 family LOR96_001545 PF12221 Bacterial membrane protein N terminal LOR96_001550 PF01145 SPFH domain / Band 7 family LOR96_001555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LOR96_001560 PF00709 Adenylosuccinate synthetase LOR96_001565 PF02082 Transcriptional regulator LOR96_001570 PF17876 Cold shock domain LOR96_001570 PF08461 Ribonuclease R winged-helix domain LOR96_001570 PF00773 RNB domain LOR96_001570 PF08206 Ribonuclease B OB domain LOR96_001570 PF00575 S1 RNA binding domain LOR96_001575 PF00588 SpoU rRNA Methylase family LOR96_001575 PF08032 RNA 2'-O ribose methyltransferase substrate binding LOR96_001595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_001600 PF13953 PapC C-terminal domain LOR96_001600 PF13954 PapC N-terminal domain LOR96_001600 PF00577 Outer membrane usher protein LOR96_001620 PF00326 Prolyl oligopeptidase family LOR96_001630 PF01250 Ribosomal protein S6 LOR96_001635 PF00436 Single-strand binding protein family LOR96_001640 PF01084 Ribosomal protein S18 LOR96_001645 PF03948 Ribosomal protein L9, C-terminal domain LOR96_001645 PF01281 Ribosomal protein L9, N-terminal domain LOR96_001650 PF04225 Opacity-associated protein A LysM-like domain LOR96_001650 PF08525 Opacity-associated protein A N-terminal motif LOR96_001655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LOR96_001655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOR96_001660 PF04405 Domain of Unknown function (DUF542) LOR96_001660 PF01814 Hemerythrin HHE cation binding domain LOR96_001665 PF02872 5'-nucleotidase, C-terminal domain LOR96_001665 PF00149 Calcineurin-like phosphoesterase LOR96_001670 PF00459 Inositol monophosphatase family LOR96_001675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LOR96_001680 PF06526 Protein of unknown function (DUF1107) LOR96_001685 PF00571 CBS domain LOR96_001685 PF03471 Transporter associated domain LOR96_001685 PF01595 Cyclin M transmembrane N-terminal domain LOR96_001690 PF01625 Peptide methionine sulfoxide reductase LOR96_001695 PF01103 Surface antigen LOR96_001695 PF17243 POTRA domain TamA domain 1 LOR96_001695 PF07244 Surface antigen variable number repeat LOR96_001700 PF04357 TamB, inner membrane protein subunit of TAM complex LOR96_001705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LOR96_001710 PF00719 Inorganic pyrophosphatase LOR96_001715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LOR96_001720 PF02875 Mur ligase family, glutamate ligase domain LOR96_001720 PF08245 Mur ligase middle domain LOR96_001720 PF01225 Mur ligase family, catalytic domain LOR96_001725 PF01316 Arginine repressor, DNA binding domain LOR96_001725 PF02863 Arginine repressor, C-terminal domain LOR96_001730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LOR96_001730 PF00056 lactate/malate dehydrogenase, NAD binding domain LOR96_001735 PF13693 Winged helix-turn-helix DNA-binding LOR96_001750 PF00348 Polyprenyl synthetase LOR96_001755 PF00829 Ribosomal prokaryotic L21 protein LOR96_001760 PF01016 Ribosomal L27 protein LOR96_001765 PF00892 EamA-like transporter family LOR96_001770 PF01926 50S ribosome-binding GTPase LOR96_001770 PF01018 GTP1/OBG LOR96_001775 PF00672 HAMP domain LOR96_001775 PF00512 His Kinase A (phospho-acceptor) domain LOR96_001775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_001780 PF00072 Response regulator receiver domain LOR96_001780 PF00486 Transcriptional regulatory protein, C terminal LOR96_001785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LOR96_001790 PF01272 Transcription elongation factor, GreA/GreB, C-term LOR96_001790 PF03449 Transcription elongation factor, N-terminal LOR96_001795 PF01985 CRS1 / YhbY (CRM) domain LOR96_001800 PF01728 FtsJ-like methyltransferase LOR96_001805 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_001805 PF17862 AAA+ lid domain LOR96_001805 PF06480 FtsH Extracellular LOR96_001805 PF01434 Peptidase family M41 LOR96_001810 PF00809 Pterin binding enzyme LOR96_001815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LOR96_001815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LOR96_001815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LOR96_001815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LOR96_001820 PF03840 Preprotein translocase SecG subunit LOR96_001835 PF02576 RimP N-terminal domain LOR96_001835 PF17384 RimP C-terminal SH3 domain LOR96_001840 PF13184 NusA-like KH domain LOR96_001840 PF08529 NusA N-terminal domain LOR96_001840 PF00575 S1 RNA binding domain LOR96_001845 PF00009 Elongation factor Tu GTP binding domain LOR96_001845 PF03144 Elongation factor Tu domain 2 LOR96_001845 PF11987 Translation-initiation factor 2 LOR96_001845 PF08364 Bacterial translation initiation factor IF-2 associated region LOR96_001845 PF04760 Translation initiation factor IF-2, N-terminal region LOR96_001850 PF02033 Ribosome-binding factor A LOR96_001855 PF09157 Pseudouridine synthase II TruB, C-terminal LOR96_001855 PF16198 tRNA pseudouridylate synthase B C-terminal domain LOR96_001855 PF01509 TruB family pseudouridylate synthase (N terminal domain) LOR96_001860 PF00312 Ribosomal protein S15 LOR96_001865 PF01138 3' exoribonuclease family, domain 1 LOR96_001865 PF00013 KH domain LOR96_001865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LOR96_001865 PF03725 3' exoribonuclease family, domain 2 LOR96_001865 PF00575 S1 RNA binding domain LOR96_001870 PF07719 Tetratricopeptide repeat LOR96_001870 PF13181 Tetratricopeptide repeat LOR96_001875 PF03880 DbpA RNA binding domain LOR96_001875 PF00270 DEAD/DEAH box helicase LOR96_001875 PF12343 Cold shock protein DEAD box A LOR96_001875 PF00271 Helicase conserved C-terminal domain LOR96_001880 PF00296 Luciferase-like monooxygenase LOR96_001890 PF03313 Serine dehydratase alpha chain LOR96_001895 PF01136 Peptidase family U32 LOR96_001900 PF01136 Peptidase family U32 LOR96_001905 PF02036 SCP-2 sterol transfer family LOR96_001910 PF13508 Acetyltransferase (GNAT) domain LOR96_001915 PF01541 GIY-YIG catalytic domain LOR96_001920 PF13520 Amino acid permease LOR96_001925 PF01276 Orn/Lys/Arg decarboxylase, major domain LOR96_001925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LOR96_001925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LOR96_001930 PF10940 Protein of unknown function (DUF2618) LOR96_001940 PF13460 NAD(P)H-binding LOR96_001945 PF12706 Beta-lactamase superfamily domain LOR96_001955 PF07969 Amidohydrolase family LOR96_001960 PF00005 ABC transporter LOR96_001965 PF00005 ABC transporter LOR96_001970 PF06007 Phosphonate metabolism protein PhnJ LOR96_001975 PF05861 Bacterial phosphonate metabolism protein (PhnI) LOR96_001980 PF05845 Bacterial phosphonate metabolism protein (PhnH) LOR96_001985 PF06754 Phosphonate metabolism protein PhnG LOR96_001995 PF13597 Anaerobic ribonucleoside-triphosphate reductase LOR96_001995 PF03477 ATP cone domain LOR96_002000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LOR96_002000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LOR96_002005 PF06877 Regulator of ribonuclease activity B LOR96_002010 PF00583 Acetyltransferase (GNAT) family LOR96_002015 PF08264 Anticodon-binding domain of tRNA LOR96_002015 PF00133 tRNA synthetases class I (I, L, M and V) LOR96_002015 PF10458 Valyl tRNA synthetase tRNA binding arm LOR96_002020 PF04364 DNA polymerase III chi subunit, HolC LOR96_002025 PF00883 Cytosol aminopeptidase family, catalytic domain LOR96_002025 PF02789 Cytosol aminopeptidase family, N-terminal domain LOR96_002030 PF03739 Lipopolysaccharide export system permease LptF/LptG LOR96_002035 PF03739 Lipopolysaccharide export system permease LptF/LptG LOR96_002075 PF04221 RelB antitoxin LOR96_002080 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LOR96_002125 PF00892 EamA-like transporter family LOR96_002170 PF01344 Kelch motif LOR96_002175 PF06178 Oligogalacturonate-specific porin protein (KdgM) LOR96_002180 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LOR96_002180 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain LOR96_002180 PF02278 Polysaccharide lyase family 8, super-sandwich domain LOR96_002195 PF09092 Lyase, N terminal LOR96_002195 PF09093 Lyase, catalytic LOR96_002195 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LOR96_002195 PF02278 Polysaccharide lyase family 8, super-sandwich domain LOR96_002200 PF00884 Sulfatase LOR96_002205 PF08220 DeoR-like helix-turn-helix domain LOR96_002205 PF00455 DeoR C terminal sensor domain LOR96_002210 PF08013 Tagatose 6 phosphate kinase LOR96_002215 PF01380 SIS domain LOR96_002220 PF03830 PTS system sorbose subfamily IIB component LOR96_002225 PF03609 PTS system sorbose-specific iic component LOR96_002230 PF03613 PTS system mannose/fructose/sorbose family IID component LOR96_002240 PF01979 Amidohydrolase family LOR96_002245 PF04962 KduI/IolB family LOR96_002255 PF07470 Glycosyl Hydrolase Family 88 LOR96_002260 PF04055 Radical SAM superfamily LOR96_002260 PF13186 Iron-sulfur cluster-binding domain LOR96_002265 PF00884 Sulfatase LOR96_002275 PF01116 Fructose-bisphosphate aldolase class-II LOR96_002285 PF10696 Protein of unknown function (DUF2501) LOR96_002290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOR96_002305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOR96_002310 PF00873 AcrB/AcrD/AcrF family LOR96_002315 PF00465 Iron-containing alcohol dehydrogenase LOR96_002320 PF02733 Dak1 domain LOR96_002325 PF02734 DAK2 domain LOR96_002330 PF00381 PTS HPr component phosphorylation site LOR96_002330 PF03610 PTS system fructose IIA component LOR96_002330 PF00391 PEP-utilising enzyme, mobile domain LOR96_002330 PF05524 PEP-utilising enzyme, N-terminal LOR96_002335 PF02954 Bacterial regulatory protein, Fis family LOR96_002335 PF00989 PAS fold LOR96_002335 PF00158 Sigma-54 interaction domain LOR96_002340 PF00990 Diguanylate cyclase, GGDEF domain LOR96_002345 PF07256 Protein of unknown function (DUF1435) LOR96_002365 PF05175 Methyltransferase small domain LOR96_002365 PF08468 Methyltransferase small domain N-terminal LOR96_002370 PF03603 DNA polymerase III psi subunit LOR96_002375 PF00583 Acetyltransferase (GNAT) family LOR96_002380 PF00009 Elongation factor Tu GTP binding domain LOR96_002380 PF03144 Elongation factor Tu domain 2 LOR96_002380 PF16658 Class II release factor RF3, C-terminal domain LOR96_002385 PF04972 BON domain LOR96_002390 PF07043 Protein of unknown function (DUF1328) LOR96_002395 PF01734 Patatin-like phospholipase LOR96_002400 PF01026 TatD related DNase LOR96_002405 PF07670 Nucleoside recognition LOR96_002405 PF07662 Na+ dependent nucleoside transporter C-terminus LOR96_002405 PF01773 Na+ dependent nucleoside transporter N-terminus LOR96_002410 PF01791 DeoC/LacD family aldolase LOR96_002415 PF02885 Glycosyl transferase family, helical bundle domain LOR96_002415 PF00591 Glycosyl transferase family, a/b domain LOR96_002415 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LOR96_002420 PF01676 Metalloenzyme superfamily LOR96_002425 PF01048 Phosphorylase superfamily LOR96_002430 PF10144 Bacterial virulence factor haemolysin LOR96_002435 PF18429 Domain of unknown function (DUF5609) LOR96_002440 PF18073 Rubredoxin metal binding domain LOR96_002445 PF13521 AAA domain LOR96_002445 PF01381 Helix-turn-helix LOR96_002450 PF12848 ABC transporter LOR96_002450 PF00005 ABC transporter LOR96_002465 PF00689 Cation transporting ATPase, C-terminus LOR96_002465 PF00690 Cation transporter/ATPase, N-terminus LOR96_002475 PF14718 Soluble lytic murein transglycosylase L domain LOR96_002475 PF01464 Transglycosylase SLT domain LOR96_002480 PF01371 Trp repressor protein LOR96_002485 PF01931 Protein of unknown function DUF84 LOR96_002490 PF00300 Histidine phosphatase superfamily (branch 1) LOR96_002495 PF06445 GyrI-like small molecule binding domain LOR96_002495 PF12833 Helix-turn-helix domain LOR96_002500 PF05981 CreA protein LOR96_002505 PF00072 Response regulator receiver domain LOR96_002505 PF00486 Transcriptional regulatory protein, C terminal LOR96_002515 PF08254 Threonine leader peptide LOR96_002520 PF03447 Homoserine dehydrogenase, NAD binding domain LOR96_002520 PF01842 ACT domain LOR96_002520 PF13840 ACT domain LOR96_002520 PF00696 Amino acid kinase family LOR96_002520 PF00742 Homoserine dehydrogenase LOR96_002525 PF08544 GHMP kinases C terminal LOR96_002525 PF00288 GHMP kinases N terminal domain LOR96_002530 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_002530 PF14821 Threonine synthase N terminus LOR96_002535 PF03883 Peroxide stress protein YaaA LOR96_002540 PF00923 Transaldolase/Fructose-6-phosphate aldolase LOR96_002545 PF00994 Probable molybdopterin binding domain LOR96_002550 PF07690 Major Facilitator Superfamily LOR96_002560 PF01184 GPR1/FUN34/yaaH family LOR96_002565 PF00012 Hsp70 protein LOR96_002570 PF01556 DnaJ C terminal domain LOR96_002570 PF00684 DnaJ central domain LOR96_002570 PF00226 DnaJ domain LOR96_002575 PF06965 Na+/H+ antiporter 1 LOR96_002580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_002580 PF03466 LysR substrate binding domain LOR96_002585 PF01649 Ribosomal protein S20 LOR96_002590 PF06574 FAD synthetase LOR96_002590 PF01687 Riboflavin kinase LOR96_002595 PF08264 Anticodon-binding domain of tRNA LOR96_002595 PF06827 Zinc finger found in FPG and IleRS LOR96_002595 PF00133 tRNA synthetases class I (I, L, M and V) LOR96_002600 PF01252 Signal peptidase (SPase) II LOR96_002605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOR96_002610 PF02401 LytB protein LOR96_002615 PF05173 Dihydrodipicolinate reductase, C-terminus LOR96_002615 PF01113 Dihydrodipicolinate reductase, N-terminus LOR96_002620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LOR96_002620 PF00117 Glutamine amidotransferase class-I LOR96_002625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOR96_002625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LOR96_002625 PF02142 MGS-like domain LOR96_002630 PF01810 LysE type translocator LOR96_002635 PF06738 Putative threonine/serine exporter LOR96_002640 PF12821 Threonine/Serine exporter, ThrE LOR96_002645 PF00186 Dihydrofolate reductase LOR96_002655 PF00149 Calcineurin-like phosphoesterase LOR96_002660 PF04379 ApaG domain LOR96_002665 PF00398 Ribosomal RNA adenine dimethylase LOR96_002670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LOR96_002675 PF00639 PPIC-type PPIASE domain LOR96_002675 PF09312 SurA N-terminal domain LOR96_002680 PF04453 LPS transport system D LOR96_002680 PF03968 OstA-like protein LOR96_002685 PF00226 DnaJ domain LOR96_002685 PF05099 Tellurite resistance protein TerB LOR96_002690 PF00849 RNA pseudouridylate synthase LOR96_002695 PF18337 RapA N-terminal Tudor like domain LOR96_002695 PF18339 RapA N-terminal Tudor like domain 1 LOR96_002695 PF12137 RNA polymerase recycling family C-terminal LOR96_002695 PF00271 Helicase conserved C-terminal domain LOR96_002695 PF00176 SNF2 family N-terminal domain LOR96_002700 PF00136 DNA polymerase family B LOR96_002700 PF03104 DNA polymerase family B, exonuclease domain LOR96_002705 PF09335 SNARE associated Golgi protein LOR96_002710 PF00005 ABC transporter LOR96_002715 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_002725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_002725 PF12793 Sugar transport-related sRNA regulator N-term LOR96_002735 PF07690 Major Facilitator Superfamily LOR96_002740 PF00694 Aconitase C-terminal domain LOR96_002745 PF00330 Aconitase family (aconitate hydratase) LOR96_002750 PF00180 Isocitrate/isopropylmalate dehydrogenase LOR96_002755 PF00682 HMGL-like LOR96_002755 PF08502 LeuA allosteric (dimerisation) domain LOR96_002760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_002760 PF03466 LysR substrate binding domain LOR96_002765 PF00501 AMP-binding enzyme LOR96_002770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOR96_002770 PF00205 Thiamine pyrophosphate enzyme, central domain LOR96_002770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOR96_002775 PF10369 Small subunit of acetolactate synthase LOR96_002780 PF00356 Bacterial regulatory proteins, lacI family LOR96_002780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LOR96_002785 PF06610 L-alanine exporter LOR96_002790 PF02381 MraZ protein, putative antitoxin-like LOR96_002795 PF01795 MraW methylase family LOR96_002800 PF04999 Cell division protein FtsL LOR96_002805 PF03717 Penicillin-binding Protein dimerisation domain LOR96_002805 PF00905 Penicillin binding protein transpeptidase domain LOR96_002810 PF01225 Mur ligase family, catalytic domain LOR96_002810 PF08245 Mur ligase middle domain LOR96_002810 PF02875 Mur ligase family, glutamate ligase domain LOR96_002815 PF02875 Mur ligase family, glutamate ligase domain LOR96_002815 PF08245 Mur ligase middle domain LOR96_002815 PF01225 Mur ligase family, catalytic domain LOR96_002820 PF00953 Glycosyl transferase family 4 LOR96_002820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LOR96_002825 PF08245 Mur ligase middle domain LOR96_002825 PF02875 Mur ligase family, glutamate ligase domain LOR96_002830 PF01098 Cell cycle protein LOR96_002835 PF04101 Glycosyltransferase family 28 C-terminal domain LOR96_002835 PF03033 Glycosyltransferase family 28 N-terminal domain LOR96_002840 PF01225 Mur ligase family, catalytic domain LOR96_002840 PF02875 Mur ligase family, glutamate ligase domain LOR96_002840 PF08245 Mur ligase middle domain LOR96_002845 PF01820 D-ala D-ala ligase N-terminus LOR96_002845 PF07478 D-ala D-ala ligase C-terminus LOR96_002850 PF08478 POTRA domain, FtsQ-type LOR96_002850 PF03799 Cell division protein FtsQ LOR96_002855 PF02491 SHS2 domain inserted in FTSA LOR96_002860 PF12327 FtsZ family, C-terminal domain LOR96_002860 PF00091 Tubulin/FtsZ family, GTPase domain LOR96_002865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LOR96_002875 PF06558 Secretion monitor precursor protein (SecM) LOR96_002880 PF07516 SecA Wing and Scaffold domain LOR96_002880 PF02810 SEC-C motif LOR96_002880 PF07517 SecA DEAD-like domain LOR96_002880 PF01043 SecA preprotein cross-linking domain LOR96_002885 PF00293 NUDIX domain LOR96_002890 PF03884 DNA gyrase inhibitor YacG LOR96_002895 PF07072 Cell division protein LOR96_002900 PF01121 Dephospho-CoA kinase LOR96_002905 PF00478 IMP dehydrogenase / GMP reductase domain LOR96_002910 PF00482 Type II secretion system (T2SS), protein F LOR96_002915 PF00437 Type II/IV secretion system protein LOR96_002915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LOR96_002920 PF07963 Prokaryotic N-terminal methylation motif LOR96_002925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LOR96_002925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LOR96_002930 PF01510 N-acetylmuramoyl-L-alanine amidase LOR96_002935 PF17113 Regulatory signalling modulator protein AmpE LOR96_002940 PF00324 Amino acid permease LOR96_002945 PF00392 Bacterial regulatory proteins, gntR family LOR96_002945 PF07729 FCD domain LOR96_002950 PF00456 Transketolase, thiamine diphosphate binding domain LOR96_002950 PF17831 Pyruvate dehydrogenase E1 component middle domain LOR96_002955 PF02817 e3 binding domain LOR96_002955 PF00364 Biotin-requiring enzyme LOR96_002955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOR96_002960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOR96_002960 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_002970 PF11791 Aconitate B N-terminal domain LOR96_002970 PF06434 Aconitate hydratase 2 N-terminus LOR96_002970 PF00330 Aconitase family (aconitate hydratase) LOR96_002975 PF06062 Uncharacterised protein family (UPF0231) LOR96_002980 PF00892 EamA-like transporter family LOR96_002985 PF02675 S-adenosylmethionine decarboxylase LOR96_002990 PF17284 Spermidine synthase tetramerisation domain LOR96_002995 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LOR96_003000 PF07732 Multicopper oxidase LOR96_003000 PF07731 Multicopper oxidase LOR96_003000 PF00394 Multicopper oxidase LOR96_003000 PF10518 TAT (twin-arginine translocation) pathway signal sequence LOR96_003005 PF00156 Phosphoribosyl transferase domain LOR96_003010 PF00484 Carbonic anhydrase LOR96_003015 PF00005 ABC transporter LOR96_003020 PF01061 ABC-2 type transporter LOR96_003025 PF01522 Polysaccharide deacetylase LOR96_003030 PF02261 Aspartate decarboxylase LOR96_003035 PF02569 Pantoate-beta-alanine ligase LOR96_003040 PF02548 Ketopantoate hydroxymethyltransferase LOR96_003045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LOR96_003050 PF01743 Poly A polymerase head domain LOR96_003050 PF12627 Probable RNA and SrmB- binding site of polymerase A LOR96_003050 PF12626 Polymerase A arginine-rich C-terminus LOR96_003055 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOR96_003060 PF01258 Prokaryotic dksA/traR C4-type zinc finger LOR96_003065 PF03749 Sugar fermentation stimulation protein RE domain LOR96_003065 PF17746 SfsA N-terminal OB domain LOR96_003070 PF02834 LigT like Phosphoesterase LOR96_003075 PF00270 DEAD/DEAH box helicase LOR96_003075 PF00271 Helicase conserved C-terminal domain LOR96_003075 PF08482 ATP-dependent helicase C-terminal LOR96_003075 PF04408 Helicase associated domain (HA2) LOR96_003080 PF14814 Bifunctional transglycosylase second domain LOR96_003080 PF00905 Penicillin binding protein transpeptidase domain LOR96_003080 PF00912 Transglycosylase LOR96_003080 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LOR96_003085 PF00202 Aminotransferase class-III LOR96_003090 PF00654 Voltage gated chloride channel LOR96_003095 PF01521 Iron-sulphur cluster biosynthesis LOR96_003100 PF03458 UPF0126 domain LOR96_003105 PF01497 Periplasmic binding protein LOR96_003110 PF01048 Phosphorylase superfamily LOR96_003115 PF01966 HD domain LOR96_003115 PF13286 Phosphohydrolase-associated domain LOR96_003120 PF00595 PDZ domain LOR96_003125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LOR96_003125 PF00672 HAMP domain LOR96_003125 PF01627 Hpt domain LOR96_003125 PF00512 His Kinase A (phospho-acceptor) domain LOR96_003125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_003125 PF00072 Response regulator receiver domain LOR96_003130 PF05958 tRNA (Uracil-5-)-methyltransferase LOR96_003130 PF01938 TRAM domain LOR96_003135 PF13291 ACT domain LOR96_003135 PF02824 TGS domain LOR96_003135 PF04607 Region found in RelA / SpoT proteins LOR96_003140 PF03819 MazG nucleotide pyrophosphohydrolase domain LOR96_003145 PF06418 CTP synthase N-terminus LOR96_003145 PF00117 Glutamine amidotransferase class-I LOR96_003150 PF00113 Enolase, C-terminal TIM barrel domain LOR96_003150 PF03952 Enolase, N-terminal domain LOR96_003155 PF04055 Radical SAM superfamily LOR96_003160 PF01242 6-pyruvoyl tetrahydropterin synthase LOR96_003165 PF00175 Oxidoreductase NAD-binding domain LOR96_003165 PF00667 FAD binding domain LOR96_003165 PF00258 Flavodoxin LOR96_003170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LOR96_003170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LOR96_003175 PF01507 Phosphoadenosine phosphosulfate reductase family LOR96_003190 PF04389 Peptidase family M28 LOR96_003195 PF10414 Sirohaem synthase dimerisation region LOR96_003195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOR96_003195 PF14824 Sirohaem biosynthesis protein central LOR96_003200 PF01507 Phosphoadenosine phosphosulfate reductase family LOR96_003205 PF00009 Elongation factor Tu GTP binding domain LOR96_003215 PF12084 Protein of unknown function (DUF3561) LOR96_003220 PF04977 Septum formation initiator LOR96_003225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LOR96_003230 PF02542 YgbB family LOR96_003235 PF01142 tRNA pseudouridine synthase D (TruD) LOR96_003240 PF01975 Survival protein SurE LOR96_003250 PF01476 LysM domain LOR96_003250 PF01551 Peptidase family M23 LOR96_003255 PF04545 Sigma-70, region 4 LOR96_003255 PF04542 Sigma-70 region 2 LOR96_003255 PF00140 Sigma-70 factor, region 1.2 LOR96_003255 PF04539 Sigma-70 region 3 LOR96_003260 PF01624 MutS domain I LOR96_003260 PF05188 MutS domain II LOR96_003260 PF05192 MutS domain III LOR96_003260 PF05190 MutS family domain IV LOR96_003260 PF00488 MutS domain V LOR96_003295 PF13193 AMP-binding enzyme C-terminal domain LOR96_003295 PF00668 Condensation domain LOR96_003295 PF00501 AMP-binding enzyme LOR96_003295 PF00550 Phosphopantetheine attachment site LOR96_003330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_003330 PF09308 LuxQ, periplasmic LOR96_003330 PF00512 His Kinase A (phospho-acceptor) domain LOR96_003330 PF00072 Response regulator receiver domain LOR96_003335 PF00072 Response regulator receiver domain LOR96_003335 PF00196 Bacterial regulatory proteins, luxR family LOR96_003350 PF01464 Transglycosylase SLT domain LOR96_003370 PF01514 Secretory protein of YscJ/FliF family LOR96_003390 PF12833 Helix-turn-helix domain LOR96_003395 PF03958 Bacterial type II/III secretion system short domain LOR96_003395 PF00263 Bacterial type II and III secretion system protein LOR96_003400 PF07201 HrpJ-like domain LOR96_003405 PF00771 FHIPEP family LOR96_003415 PF18269 T3SS EscN ATPase C-terminal domain LOR96_003415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOR96_003415 PF02874 ATP synthase alpha/beta family, beta-barrel domain LOR96_003430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LOR96_003435 PF00813 FliP family LOR96_003440 PF01313 Bacterial export proteins, family 3 LOR96_003445 PF01311 Bacterial export proteins, family 1 LOR96_003450 PF01312 FlhB HrpN YscU SpaS Family LOR96_003455 PF07720 Tetratricopeptide repeat LOR96_003480 PF00550 Phosphopantetheine attachment site LOR96_003500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LOR96_003500 PF18416 N-acetylglucosamine binding protein domain 2 LOR96_003505 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LOR96_003510 PF01478 Type IV leader peptidase family LOR96_003510 PF06750 Bacterial Peptidase A24 N-terminal domain LOR96_003520 PF05134 Type II secretion system (T2SS), protein L LOR96_003520 PF12693 GspL periplasmic domain LOR96_003525 PF03934 Type II secretion system (T2SS), protein K LOR96_003530 PF07963 Prokaryotic N-terminal methylation motif LOR96_003530 PF11612 Type II secretion system (T2SS), protein J LOR96_003535 PF07963 Prokaryotic N-terminal methylation motif LOR96_003535 PF02501 Type II secretion system (T2SS), protein I LOR96_003545 PF07963 Prokaryotic N-terminal methylation motif LOR96_003545 PF08334 Type II secretion system (T2SS), protein G LOR96_003550 PF00482 Type II secretion system (T2SS), protein F LOR96_003555 PF00437 Type II/IV secretion system protein LOR96_003560 PF00263 Bacterial type II and III secretion system protein LOR96_003560 PF03958 Bacterial type II/III secretion system short domain LOR96_003565 PF11356 Type II secretion system protein C LOR96_003590 PF05681 Fumarate hydratase (Fumerase) LOR96_003590 PF05683 Fumarase C-terminus LOR96_003595 PF07690 Major Facilitator Superfamily LOR96_003600 PF02464 Competence-damaged protein LOR96_003605 PF00154 recA bacterial DNA recombination protein LOR96_003610 PF02631 RecX family LOR96_003615 PF01411 tRNA synthetases class II (A) LOR96_003615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOR96_003615 PF02272 DHHA1 domain LOR96_003620 PF02599 Global regulator protein family LOR96_003650 PF01411 tRNA synthetases class II (A) LOR96_003650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOR96_003655 PF01411 tRNA synthetases class II (A) LOR96_003655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOR96_003660 PF13419 Haloacid dehalogenase-like hydrolase LOR96_003665 PF09335 SNARE associated Golgi protein LOR96_003670 PF04262 Glutamate-cysteine ligase LOR96_003675 PF02664 S-Ribosylhomocysteinase (LuxS) LOR96_003680 PF00571 CBS domain LOR96_003680 PF03471 Transporter associated domain LOR96_003680 PF01595 Cyclin M transmembrane N-terminal domain LOR96_003685 PF01578 Cytochrome C assembly protein LOR96_003690 PF00448 SRP54-type protein, GTPase domain LOR96_003690 PF02881 SRP54-type protein, helical bundle domain LOR96_003690 PF02978 Signal peptide binding domain LOR96_003695 PF00886 Ribosomal protein S16 LOR96_003700 PF01782 RimM N-terminal domain LOR96_003700 PF05239 PRC-barrel domain LOR96_003705 PF01746 tRNA (Guanine-1)-methyltransferase LOR96_003710 PF01245 Ribosomal protein L19 LOR96_003715 PF04338 Protein of unknown function, DUF481 LOR96_003720 PF03605 Anaerobic c4-dicarboxylate membrane transporter LOR96_003725 PF00072 Response regulator receiver domain LOR96_003725 PF04397 LytTr DNA-binding domain LOR96_003730 PF00793 DAHP synthetase I family LOR96_003735 PF01817 Chorismate mutase type II LOR96_003735 PF02153 Prephenate dehydrogenase LOR96_003740 PF00800 Prephenate dehydratase LOR96_003740 PF01817 Chorismate mutase type II LOR96_003750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LOR96_003755 PF13525 Outer membrane lipoprotein LOR96_003760 PF00849 RNA pseudouridylate synthase LOR96_003760 PF01479 S4 domain LOR96_003765 PF02578 Multi-copper polyphenol oxidoreductase laccase LOR96_003770 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_003770 PF07724 AAA domain (Cdc48 subfamily) LOR96_003770 PF17871 AAA lid domain LOR96_003770 PF02861 Clp amino terminal domain, pathogenicity island component LOR96_003770 PF10431 C-terminal, D2-small domain, of ClpB protein LOR96_003805 PF03372 Endonuclease/Exonuclease/phosphatase family LOR96_003810 PF01476 LysM domain LOR96_003810 PF01464 Transglycosylase SLT domain LOR96_003815 PF16123 Hydroxyacylglutathione hydrolase C-terminus LOR96_003815 PF00753 Metallo-beta-lactamase superfamily LOR96_003820 PF08241 Methyltransferase domain LOR96_003825 PF00075 RNase H LOR96_003830 PF00929 Exonuclease LOR96_003840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOR96_003840 PF09317 Domain of unknown function (DUF1974) LOR96_003840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOR96_003845 PF13580 SIS domain LOR96_003850 PF13230 Glutamine amidotransferases class-II LOR96_003855 PF03734 L,D-transpeptidase catalytic domain LOR96_003860 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LOR96_003860 PF11973 NQRA C-terminal domain LOR96_003865 PF03116 NQR2, RnfD, RnfE family LOR96_003870 PF04205 FMN-binding domain LOR96_003875 PF02508 Rnf-Nqr subunit, membrane protein LOR96_003880 PF02508 Rnf-Nqr subunit, membrane protein LOR96_003885 PF00970 Oxidoreductase FAD-binding domain LOR96_003885 PF00111 2Fe-2S iron-sulfur cluster binding domain LOR96_003885 PF00175 Oxidoreductase NAD-binding domain LOR96_003890 PF02424 ApbE family LOR96_003895 PF04400 (Na+)-NQR maturation NqrM LOR96_003900 PF03009 Glycerophosphoryl diester phosphodiesterase family LOR96_003905 PF11798 IMS family HHH motif LOR96_003905 PF00817 impB/mucB/samB family LOR96_003905 PF11799 impB/mucB/samB family C-terminal domain LOR96_003910 PF07687 Peptidase dimerisation domain LOR96_003910 PF01546 Peptidase family M20/M25/M40 LOR96_003915 PF00156 Phosphoribosyl transferase domain LOR96_003920 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LOR96_003925 PF07417 Sigma factor-binding transcriptional regulator Crl LOR96_003930 PF00696 Amino acid kinase family LOR96_003930 PF01472 PUA domain LOR96_003935 PF00171 Aldehyde dehydrogenase family LOR96_003940 PF07238 PilZ domain LOR96_003940 PF07317 Flagellar regulator YcgR LOR96_003965 PF00593 TonB dependent receptor LOR96_003965 PF07715 TonB-dependent Receptor Plug Domain LOR96_003970 PF01202 Shikimate kinase LOR96_003990 PF07302 AroM protein LOR96_003995 PF06865 Pyrimidine/purine nucleoside phosphorylase LOR96_004000 PF04381 Putative exonuclease, RdgC LOR96_004005 PF00480 ROK family LOR96_004010 PF13476 AAA domain LOR96_004015 PF12320 Type 5 capsule protein repressor C-terminal domain LOR96_004015 PF00149 Calcineurin-like phosphoesterase LOR96_004020 PF00072 Response regulator receiver domain LOR96_004020 PF00486 Transcriptional regulatory protein, C terminal LOR96_004025 PF11808 Phosphate regulon sensor protein PhoR LOR96_004025 PF00512 His Kinase A (phospho-acceptor) domain LOR96_004025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_004025 PF00989 PAS fold LOR96_004030 PF12849 PBP superfamily domain LOR96_004035 PF05525 Branched-chain amino acid transport protein LOR96_004040 PF00324 Amino acid permease LOR96_004045 PF00128 Alpha amylase, catalytic domain LOR96_004045 PF02903 Alpha amylase, N-terminal ig-like domain LOR96_004055 PF10417 C-terminal domain of 1-Cys peroxiredoxin LOR96_004055 PF00578 AhpC/TSA family LOR96_004060 PF04336 Acyl carrier protein phosphodiesterase LOR96_004065 PF02547 Queuosine biosynthesis protein LOR96_004070 PF01702 Queuine tRNA-ribosyltransferase LOR96_004075 PF02699 Preprotein translocase subunit LOR96_004080 PF07549 SecD/SecF GG Motif LOR96_004080 PF13721 SecD export protein N-terminal TM region LOR96_004080 PF02355 Protein export membrane protein LOR96_004085 PF07549 SecD/SecF GG Motif LOR96_004085 PF02355 Protein export membrane protein LOR96_004090 PF03477 ATP cone domain LOR96_004095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LOR96_004095 PF01872 RibD C-terminal domain LOR96_004100 PF00885 6,7-dimethyl-8-ribityllumazine synthase LOR96_004105 PF01029 NusB family LOR96_004110 PF00586 AIR synthase related protein, N-terminal domain LOR96_004110 PF02769 AIR synthase related protein, C-terminal domain LOR96_004115 PF04608 Phosphatidylglycerophosphatase A LOR96_004120 PF02779 Transketolase, pyrimidine binding domain LOR96_004120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LOR96_004120 PF02780 Transketolase, C-terminal domain LOR96_004125 PF00348 Polyprenyl synthetase LOR96_004130 PF02609 Exonuclease VII small subunit LOR96_004135 PF02568 Thiamine biosynthesis protein (ThiI) LOR96_004135 PF02926 THUMP domain LOR96_004140 PF14532 Sigma-54 interaction domain LOR96_004140 PF02954 Bacterial regulatory protein, Fis family LOR96_004140 PF00072 Response regulator receiver domain LOR96_004145 PF00672 HAMP domain LOR96_004145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_004145 PF00512 His Kinase A (phospho-acceptor) domain LOR96_004155 PF07690 Major Facilitator Superfamily LOR96_004160 PF01965 DJ-1/PfpI family LOR96_004165 PF02558 Ketopantoate reductase PanE/ApbA LOR96_004165 PF08546 Ketopantoate reductase PanE/ApbA C terminal LOR96_004170 PF04461 Protein of unknown function (DUF520) LOR96_004175 PF07690 Major Facilitator Superfamily LOR96_004180 PF01040 UbiA prenyltransferase family LOR96_004185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LOR96_004190 PF00510 Cytochrome c oxidase subunit III LOR96_004195 PF00115 Cytochrome C and Quinol oxidase polypeptide I LOR96_004200 PF06481 COX Aromatic Rich Motif LOR96_004200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LOR96_004205 PF03502 Nucleoside-specific channel-forming protein, Tsx LOR96_004210 PF07690 Major Facilitator Superfamily LOR96_004215 PF03923 Uncharacterized lipoprotein LOR96_004215 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LOR96_004220 PF01722 BolA-like protein LOR96_004225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOR96_004225 PF05698 Bacterial trigger factor protein (TF) C-terminus LOR96_004225 PF05697 Bacterial trigger factor protein (TF) LOR96_004230 PF00574 Clp protease LOR96_004235 PF10431 C-terminal, D2-small domain, of ClpB protein LOR96_004235 PF06689 ClpX C4-type zinc finger LOR96_004235 PF07724 AAA domain (Cdc48 subfamily) LOR96_004240 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_004240 PF05362 Lon protease (S16) C-terminal proteolytic domain LOR96_004240 PF02190 ATP-dependent protease La (LON) substrate-binding domain LOR96_004245 PF00216 Bacterial DNA-binding protein LOR96_004250 PF13145 PPIC-type PPIASE domain LOR96_004265 PF06508 Queuosine biosynthesis protein QueC LOR96_004270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_004270 PF12793 Sugar transport-related sRNA regulator N-term LOR96_004285 PF01037 Lrp/AsnC ligand binding domain LOR96_004285 PF13404 AsnC-type helix-turn-helix domain LOR96_004290 PF00005 ABC transporter LOR96_004290 PF00664 ABC transporter transmembrane region LOR96_004295 PF00664 ABC transporter transmembrane region LOR96_004295 PF00005 ABC transporter LOR96_004300 PF00543 Nitrogen regulatory protein P-II LOR96_004305 PF00909 Ammonium Transporter Family LOR96_004315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LOR96_004325 PF05321 Haemolysin expression modulating protein LOR96_004330 PF10757 Biofilm formation regulator YbaJ LOR96_004340 PF00444 Ribosomal protein L36 LOR96_004345 PF01197 Ribosomal protein L31 LOR96_004350 PF00873 AcrB/AcrD/AcrF family LOR96_004355 PF00529 HlyD membrane-fusion protein of T1SS LOR96_004355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOR96_004360 PF08361 MAATS-type transcriptional repressor, C-terminal region LOR96_004360 PF00440 Bacterial regulatory proteins, tetR family LOR96_004365 PF02635 DsrE/DsrF-like family LOR96_004370 PF00924 Mechanosensitive ion channel LOR96_004370 PF12795 Mechanosensitive ion channel porin domain LOR96_004370 PF12794 Mechanosensitive ion channel inner membrane domain 1 LOR96_004375 PF10689 Protein of unknown function (DUF2496) LOR96_004385 PF04304 Protein of unknown function (DUF454) LOR96_004390 PF00156 Phosphoribosyl transferase domain LOR96_004395 PF01970 Tripartite tricarboxylate transporter TctA family LOR96_004410 PF00072 Response regulator receiver domain LOR96_004410 PF00486 Transcriptional regulatory protein, C terminal LOR96_004415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_004415 PF00512 His Kinase A (phospho-acceptor) domain LOR96_004420 PF12169 DNA polymerase III subunits gamma and tau domain III LOR96_004420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LOR96_004420 PF12170 DNA polymerase III tau subunit V interacting with alpha LOR96_004425 PF02575 YbaB/EbfC DNA-binding family LOR96_004430 PF02132 RecR protein LOR96_004430 PF13662 Toprim domain LOR96_004435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_004435 PF00183 Hsp90 protein LOR96_004440 PF05191 Adenylate kinase, active site lid LOR96_004445 PF00762 Ferrochelatase LOR96_004450 PF02706 Chain length determinant protein LOR96_004455 PF00294 pfkB family carbohydrate kinase LOR96_004460 PF02254 TrkA-N domain LOR96_004460 PF00999 Sodium/hydrogen exchanger family LOR96_004465 PF00149 Calcineurin-like phosphoesterase LOR96_004465 PF02872 5'-nucleotidase, C-terminal domain LOR96_004470 PF04073 Aminoacyl-tRNA editing domain LOR96_004475 PF01963 TraB family LOR96_004480 PF00403 Heavy-metal-associated domain LOR96_004485 PF13411 MerR HTH family regulatory protein LOR96_004490 PF01957 NfeD-like C-terminal, partner-binding LOR96_004495 PF01145 SPFH domain / Band 7 family LOR96_004495 PF16200 C-terminal region of band_7 LOR96_004500 PF00085 Thioredoxin LOR96_004505 PF00106 short chain dehydrogenase LOR96_004510 PF13472 GDSL-like Lipase/Acylhydrolase family LOR96_004515 PF00005 ABC transporter LOR96_004525 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LOR96_004525 PF02222 ATP-grasp domain LOR96_004530 PF00731 AIR carboxylase LOR96_004535 PF00149 Calcineurin-like phosphoesterase LOR96_004540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LOR96_004545 PF09190 DALR domain LOR96_004545 PF01406 tRNA synthetases class I (C) catalytic domain LOR96_004560 PF00419 Fimbrial protein LOR96_004565 PF13953 PapC C-terminal domain LOR96_004565 PF13954 PapC N-terminal domain LOR96_004565 PF00577 Outer membrane usher protein LOR96_004570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_004570 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_004605 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LOR96_004605 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LOR96_004615 PF01022 Bacterial regulatory protein, arsR family LOR96_004620 PF02040 Arsenical pump membrane protein LOR96_004625 PF03960 ArsC family LOR96_004635 PF00501 AMP-binding enzyme LOR96_004660 PF01292 Prokaryotic cytochrome b561 LOR96_004670 PF00343 Carbohydrate phosphorylase LOR96_004680 PF00072 Response regulator receiver domain LOR96_004680 PF00486 Transcriptional regulatory protein, C terminal LOR96_004690 PF00483 Nucleotidyl transferase LOR96_004700 PF07238 PilZ domain LOR96_004700 PF03552 Cellulose synthase LOR96_004700 PF00535 Glycosyl transferase family 2 LOR96_004720 PF02837 Glycosyl hydrolases family 2, sugar binding domain LOR96_004720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LOR96_004720 PF00703 Glycosyl hydrolases family 2 LOR96_004720 PF16355 Domain of unknown function (DUF4982) LOR96_004725 PF00072 Response regulator receiver domain LOR96_004725 PF01627 Hpt domain LOR96_004725 PF00512 His Kinase A (phospho-acceptor) domain LOR96_004725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_004725 PF00672 HAMP domain LOR96_004725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LOR96_004730 PF00072 Response regulator receiver domain LOR96_004730 PF00990 Diguanylate cyclase, GGDEF domain LOR96_004735 PF00440 Bacterial regulatory proteins, tetR family LOR96_004765 PF00196 Bacterial regulatory proteins, luxR family LOR96_004770 PF00313 'Cold-shock' DNA-binding domain LOR96_004775 PF00313 'Cold-shock' DNA-binding domain LOR96_004780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LOR96_004790 PF00990 Diguanylate cyclase, GGDEF domain LOR96_004790 PF05230 MASE2 domain LOR96_004795 PF02416 mttA/Hcf106 family LOR96_004800 PF04055 Radical SAM superfamily LOR96_004800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LOR96_004805 PF03099 Biotin/lipoate A/B protein ligase family LOR96_004810 PF04359 Protein of unknown function (DUF493) LOR96_004815 PF07943 Penicillin-binding protein 5, C-terminal domain LOR96_004815 PF00768 D-alanyl-D-alanine carboxypeptidase LOR96_004820 PF03330 Lytic transglycolase LOR96_004820 PF05036 Sporulation related domain LOR96_004825 PF01098 Cell cycle protein LOR96_004830 PF03717 Penicillin-binding Protein dimerisation domain LOR96_004830 PF00905 Penicillin binding protein transpeptidase domain LOR96_004835 PF02590 Predicted SPOUT methyltransferase LOR96_004845 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain LOR96_004845 PF00589 Phage integrase family LOR96_004905 PF00929 Exonuclease LOR96_004970 PF00772 DnaB-like helicase N terminal domain LOR96_004970 PF03796 DnaB-like helicase C terminal domain LOR96_004995 PF00149 Calcineurin-like phosphoesterase LOR96_005030 PF03245 Bacteriophage Rz lysis protein LOR96_005070 PF01343 Peptidase family S49 LOR96_005110 PF04984 Phage tail sheath protein subtilisin-like domain LOR96_005110 PF17482 Phage tail sheath C-terminal domain LOR96_005150 PF04865 Baseplate J-like protein LOR96_005165 PF07484 Phage Tail Collar Domain LOR96_005165 PF08400 Prophage tail fibre N-terminal LOR96_005165 PF03335 Phage tail fibre repeat LOR96_005170 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LOR96_005175 PF01467 Cytidylyltransferase-like LOR96_005180 PF06144 DNA polymerase III, delta subunit LOR96_005180 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LOR96_005185 PF04390 Lipopolysaccharide-assembly LOR96_005190 PF08264 Anticodon-binding domain of tRNA LOR96_005190 PF00133 tRNA synthetases class I (I, L, M and V) LOR96_005190 PF13603 Leucyl-tRNA synthetase, Domain 2 LOR96_005195 PF07295 Zinc-ribbon containing domain LOR96_005200 PF00005 ABC transporter LOR96_005205 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005210 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005215 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_005220 PF00795 Carbon-nitrogen hydrolase LOR96_005225 PF00571 CBS domain LOR96_005225 PF03471 Transporter associated domain LOR96_005230 PF02130 Uncharacterized protein family UPF0054 LOR96_005235 PF02562 PhoH-like protein LOR96_005240 PF01938 TRAM domain LOR96_005240 PF04055 Radical SAM superfamily LOR96_005240 PF00919 Uncharacterized protein family UPF0004 LOR96_005245 PF01494 FAD binding domain LOR96_005280 PF00733 Asparagine synthase LOR96_005280 PF13537 Glutamine amidotransferase domain LOR96_005285 PF13344 Haloacid dehalogenase-like hydrolase LOR96_005290 PF00480 ROK family LOR96_005290 PF01047 MarR family LOR96_005295 PF01979 Amidohydrolase family LOR96_005300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LOR96_005305 PF02378 Phosphotransferase system, EIIC LOR96_005305 PF00367 phosphotransferase system, EIIB LOR96_005305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LOR96_005310 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOR96_005310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LOR96_005315 PF03573 outer membrane porin, OprD family LOR96_005320 PF13982 YbfN-like lipoprotein LOR96_005325 PF02838 Glycosyl hydrolase family 20, domain 2 LOR96_005325 PF00728 Glycosyl hydrolase family 20, catalytic domain LOR96_005325 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LOR96_005325 PF03173 Putative carbohydrate binding domain LOR96_005330 PF01475 Ferric uptake regulator family LOR96_005335 PF00258 Flavodoxin LOR96_005340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_005340 PF00672 HAMP domain LOR96_005340 PF02203 Tar ligand binding domain homologue LOR96_005345 PF01402 Ribbon-helix-helix protein, copG family LOR96_005350 PF12697 Alpha/beta hydrolase family LOR96_005355 PF03925 SeqA protein C-terminal domain LOR96_005355 PF17206 SeqA protein N-terminal domain LOR96_005360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LOR96_005360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LOR96_005360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LOR96_005360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LOR96_005370 PF00072 Response regulator receiver domain LOR96_005370 PF00486 Transcriptional regulatory protein, C terminal LOR96_005375 PF00512 His Kinase A (phospho-acceptor) domain LOR96_005375 PF02702 Osmosensitive K+ channel His kinase sensor domain LOR96_005375 PF13492 GAF domain LOR96_005375 PF13493 Domain of unknown function (DUF4118) LOR96_005375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_005380 PF02669 K+-transporting ATPase, c chain LOR96_005390 PF03814 Potassium-transporting ATPase A subunit LOR96_005395 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) LOR96_005400 PF10725 Protein of unknown function (DUF2517) LOR96_005405 PF08349 Protein of unknown function (DUF1722) LOR96_005410 PF00875 DNA photolyase LOR96_005410 PF03441 FAD binding domain of DNA photolyase LOR96_005415 PF02112 cAMP phosphodiesterases class-II LOR96_005420 PF01784 NIF3 (NGG1p interacting factor 3) LOR96_005425 PF02682 Carboxyltransferase domain, subdomain C and D LOR96_005430 PF02626 Carboxyltransferase domain, subdomain A and B LOR96_005435 PF03746 LamB/YcsF family LOR96_005450 PF01470 Pyroglutamyl peptidase LOR96_005460 PF00285 Citrate synthase, C-terminal domain LOR96_005465 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LOR96_005470 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LOR96_005475 PF00890 FAD binding domain LOR96_005475 PF02910 Fumarate reductase flavoprotein C-term LOR96_005480 PF13085 2Fe-2S iron-sulfur cluster binding domain LOR96_005485 PF02779 Transketolase, pyrimidine binding domain LOR96_005485 PF16870 2-oxoglutarate dehydrogenase C-terminal LOR96_005485 PF00676 Dehydrogenase E1 component LOR96_005485 PF16078 2-oxoglutarate dehydrogenase N-terminus LOR96_005490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOR96_005490 PF00364 Biotin-requiring enzyme LOR96_005490 PF02817 e3 binding domain LOR96_005495 PF08442 ATP-grasp domain LOR96_005495 PF00549 CoA-ligase LOR96_005500 PF02629 CoA binding domain LOR96_005500 PF00549 CoA-ligase LOR96_005505 PF00149 Calcineurin-like phosphoesterase LOR96_005505 PF02872 5'-nucleotidase, C-terminal domain LOR96_005510 PF01654 Cytochrome bd terminal oxidase subunit I LOR96_005515 PF02322 Cytochrome bd terminal oxidase subunit II LOR96_005520 PF08173 Membrane bound YbgT-like protein LOR96_005525 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LOR96_005530 PF03061 Thioesterase superfamily LOR96_005535 PF01618 MotA/TolQ/ExbB proton channel family LOR96_005540 PF02472 Biopolymer transport protein ExbD/TolR LOR96_005545 PF06519 TolA C-terminal LOR96_005545 PF06519 TolA C-terminal LOR96_005550 PF07676 WD40-like Beta Propeller Repeat LOR96_005550 PF04052 TolB amino-terminal domain LOR96_005555 PF00691 OmpA family LOR96_005560 PF16331 TolA binding protein trimerisation LOR96_005560 PF13174 Tetratricopeptide repeat LOR96_005600 PF02445 Quinolinate synthetase A protein LOR96_005605 PF04973 Nicotinamide mononucleotide transporter LOR96_005610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_005610 PF00512 His Kinase A (phospho-acceptor) domain LOR96_005610 PF01627 Hpt domain LOR96_005610 PF00989 PAS fold LOR96_005610 PF00072 Response regulator receiver domain LOR96_005610 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_005615 PF00196 Bacterial regulatory proteins, luxR family LOR96_005615 PF00072 Response regulator receiver domain LOR96_005620 PF00793 DAHP synthetase I family LOR96_005625 PF00300 Histidine phosphatase superfamily (branch 1) LOR96_005635 PF01263 Aldose 1-epimerase LOR96_005640 PF08544 GHMP kinases C terminal LOR96_005640 PF00288 GHMP kinases N terminal domain LOR96_005640 PF10509 Galactokinase galactose-binding signature LOR96_005645 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LOR96_005645 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LOR96_005650 PF16363 GDP-mannose 4,6 dehydratase LOR96_005665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_005665 PF03459 TOBE domain LOR96_005670 PF10766 Multidrug efflux pump-associated protein AcrZ LOR96_005680 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005685 PF00005 ABC transporter LOR96_005685 PF03459 TOBE domain LOR96_005695 PF10282 Lactonase, 7-bladed beta-propeller LOR96_005700 PF00202 Aminotransferase class-III LOR96_005705 PF04055 Radical SAM superfamily LOR96_005705 PF06968 Biotin and Thiamin Synthesis associated domain LOR96_005710 PF00155 Aminotransferase class I and II LOR96_005715 PF08241 Methyltransferase domain LOR96_005725 PF00005 ABC transporter LOR96_005730 PF17757 UvrB interaction domain LOR96_005730 PF00271 Helicase conserved C-terminal domain LOR96_005730 PF04851 Type III restriction enzyme, res subunit LOR96_005730 PF02151 UvrB/uvrC motif LOR96_005730 PF12344 Ultra-violet resistance protein B LOR96_005735 PF09905 DNA-binding protein VF530 LOR96_005750 PF01032 FecCD transport family LOR96_005755 PF00005 ABC transporter LOR96_005760 PF01933 Uncharacterised protein family UPF0052 LOR96_005765 PF06463 Molybdenum Cofactor Synthesis C LOR96_005765 PF04055 Radical SAM superfamily LOR96_005770 PF01967 MoaC family LOR96_005775 PF02597 ThiS family LOR96_005780 PF02391 MoaE protein LOR96_005785 PF01027 Inhibitor of apoptosis-promoting Bax1 LOR96_005800 PF00005 ABC transporter LOR96_005805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOR96_005810 PF09209 Tetracyclin repressor-like, C-terminal domain LOR96_005810 PF00440 Bacterial regulatory proteins, tetR family LOR96_005815 PF00270 DEAD/DEAH box helicase LOR96_005815 PF00271 Helicase conserved C-terminal domain LOR96_005820 PF01207 Dihydrouridine synthase (Dus) LOR96_005830 PF00768 D-alanyl-D-alanine carboxypeptidase LOR96_005835 PF09330 D-lactate dehydrogenase, membrane binding LOR96_005835 PF01565 FAD binding domain LOR96_005840 PF01928 CYTH domain LOR96_005845 PF01844 HNH endonuclease LOR96_005855 PF04226 Transglycosylase associated protein LOR96_005860 PF00005 ABC transporter LOR96_005870 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005875 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005880 PF07308 Protein of unknown function (DUF1456) LOR96_005885 PF00581 Rhodanese-like domain LOR96_005890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LOR96_005895 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005900 PF00005 ABC transporter LOR96_005905 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005910 PF13520 Amino acid permease LOR96_005915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LOR96_005915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LOR96_005915 PF01276 Orn/Lys/Arg decarboxylase, major domain LOR96_005925 PF00892 EamA-like transporter family LOR96_005930 PF00267 Gram-negative porin LOR96_005935 PF13307 Helicase C-terminal domain LOR96_005935 PF06733 DEAD_2 LOR96_005940 PF02885 Glycosyl transferase family, helical bundle domain LOR96_005945 PF05971 RNA methyltransferase LOR96_005950 PF00005 ABC transporter LOR96_005955 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_005960 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_005965 PF00210 Ferritin-like domain LOR96_005970 PF13649 Methyltransferase domain LOR96_005975 PF00892 EamA-like transporter family LOR96_005980 PF13505 Outer membrane protein beta-barrel domain LOR96_005985 PF00571 CBS domain LOR96_005985 PF01769 Divalent cation transporter LOR96_005985 PF03448 MgtE intracellular N domain LOR96_005990 PF01545 Cation efflux family LOR96_005990 PF16916 Dimerisation domain of Zinc Transporter LOR96_005995 PF00005 ABC transporter LOR96_005995 PF12848 ABC transporter LOR96_006000 PF00899 ThiF family LOR96_006005 PF00994 Probable molybdopterin binding domain LOR96_006005 PF03454 MoeA C-terminal region (domain IV) LOR96_006005 PF03453 MoeA N-terminal region (domain I and II) LOR96_006015 PF00756 Putative esterase LOR96_006020 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_006020 PF00107 Zinc-binding dehydrogenase LOR96_006025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_006025 PF03466 LysR substrate binding domain LOR96_006030 PF06779 Uncharacterised MFS-type transporter YbfB LOR96_006035 PF01227 GTP cyclohydrolase I LOR96_006040 PF04235 Protein of unknown function (DUF418) LOR96_006045 PF00356 Bacterial regulatory proteins, lacI family LOR96_006050 PF13407 Periplasmic binding protein domain LOR96_006055 PF00005 ABC transporter LOR96_006060 PF02653 Branched-chain amino acid transport system / permease component LOR96_006065 PF02698 DUF218 domain LOR96_006070 PF03949 Malic enzyme, NAD binding domain LOR96_006070 PF00390 Malic enzyme, N-terminal domain LOR96_006080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_006080 PF03466 LysR substrate binding domain LOR96_006085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LOR96_006085 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LOR96_006090 PF04172 LrgB-like family LOR96_006095 PF03788 LrgA family LOR96_006105 PF09334 tRNA synthetases class I (M) LOR96_006105 PF01588 Putative tRNA binding domain LOR96_006110 PF10609 NUBPL iron-transfer P-loop NTPase LOR96_006115 PF00485 Phosphoribulokinase / Uridine kinase family LOR96_006120 PF00692 dUTPase LOR96_006125 PF05170 AsmA family LOR96_006130 PF03606 C4-dicarboxylate anaerobic carrier LOR96_006135 PF00571 CBS domain LOR96_006135 PF03471 Transporter associated domain LOR96_006135 PF03741 Integral membrane protein TerC family LOR96_006140 PF00483 Nucleotidyl transferase LOR96_006145 PF00483 Nucleotidyl transferase LOR96_006150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOR96_006150 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LOR96_006160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LOR96_006160 PF01502 Phosphoribosyl-AMP cyclohydrolase LOR96_006165 PF00977 Histidine biosynthesis protein LOR96_006170 PF00977 Histidine biosynthesis protein LOR96_006175 PF00117 Glutamine amidotransferase class-I LOR96_006180 PF00475 Imidazoleglycerol-phosphate dehydratase LOR96_006185 PF00155 Aminotransferase class I and II LOR96_006190 PF00815 Histidinol dehydrogenase LOR96_006195 PF01634 ATP phosphoribosyltransferase LOR96_006195 PF08029 HisG, C-terminal domain LOR96_006205 PF01370 NAD dependent epimerase/dehydratase family LOR96_006210 PF00043 Glutathione S-transferase, C-terminal domain LOR96_006210 PF13417 Glutathione S-transferase, N-terminal domain LOR96_006225 PF01053 Cys/Met metabolism PLP-dependent enzyme LOR96_006230 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_006230 PF00571 CBS domain LOR96_006235 PF00768 D-alanyl-D-alanine carboxypeptidase LOR96_006235 PF07943 Penicillin-binding protein 5, C-terminal domain LOR96_006240 PF03313 Serine dehydratase alpha chain LOR96_006240 PF03315 Serine dehydratase beta chain LOR96_006250 PF00455 DeoR C terminal sensor domain LOR96_006250 PF08220 DeoR-like helix-turn-helix domain LOR96_006255 PF01791 DeoC/LacD family aldolase LOR96_006260 PF01569 PAP2 superfamily LOR96_006270 PF06826 Predicted Permease Membrane Region LOR96_006270 PF02080 TrkA-C domain LOR96_006275 PF00462 Glutaredoxin LOR96_006280 PF07214 Protein of unknown function (DUF1418) LOR96_006285 PF10722 Putative bacterial sensory transduction regulator LOR96_006290 PF13416 Bacterial extracellular solute-binding protein LOR96_006295 PF00005 ABC transporter LOR96_006295 PF08402 TOBE domain LOR96_006300 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_006305 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_006310 PF10767 Protein of unknown function (DUF2593) LOR96_006315 PF05958 tRNA (Uracil-5-)-methyltransferase LOR96_006320 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_006325 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_006330 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_006335 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_006340 PF00005 ABC transporter LOR96_006345 PF12883 Protein of unknown function (DUF3828) LOR96_006350 PF01906 Putative heavy-metal-binding LOR96_006355 PF01370 NAD dependent epimerase/dehydratase family LOR96_006360 PF11066 Protein of unknown function (DUF2867) LOR96_006360 PF13460 NAD(P)H-binding LOR96_006365 PF01212 Beta-eliminating lyase LOR96_006370 PF00970 Oxidoreductase FAD-binding domain LOR96_006370 PF00111 2Fe-2S iron-sulfur cluster binding domain LOR96_006370 PF00175 Oxidoreductase NAD-binding domain LOR96_006375 PF03063 Prismane/CO dehydrogenase family LOR96_006380 PF03956 Lysine exporter LysO LOR96_006385 PF11398 Protein of unknown function (DUF2813) LOR96_006390 PF04393 Protein of unknown function (DUF535) LOR96_006395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOR96_006400 PF02687 FtsX-like permease family LOR96_006400 PF00005 ABC transporter LOR96_006400 PF12704 MacB-like periplasmic core domain LOR96_006405 PF00313 'Cold-shock' DNA-binding domain LOR96_006410 PF02617 ATP-dependent Clp protease adaptor protein ClpS LOR96_006415 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_006415 PF07724 AAA domain (Cdc48 subfamily) LOR96_006415 PF17871 AAA lid domain LOR96_006415 PF02861 Clp amino terminal domain, pathogenicity island component LOR96_006415 PF10431 C-terminal, D2-small domain, of ClpB protein LOR96_006420 PF01176 Translation initiation factor 1A / IF-1 LOR96_006425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LOR96_006430 PF00664 ABC transporter transmembrane region LOR96_006430 PF00005 ABC transporter LOR96_006435 PF00664 ABC transporter transmembrane region LOR96_006435 PF00005 ABC transporter LOR96_006440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_006445 PF01037 Lrp/AsnC ligand binding domain LOR96_006450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LOR96_006450 PF17854 FtsK alpha domain LOR96_006450 PF09397 Ftsk gamma domain LOR96_006450 PF01580 FtsK/SpoIIIE family LOR96_006455 PF03548 Outer membrane lipoprotein carrier protein LolA LOR96_006460 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_006460 PF16193 AAA C-terminal domain LOR96_006460 PF12002 MgsA AAA+ ATPase C terminal LOR96_006465 PF02403 Seryl-tRNA synthetase N-terminal domain LOR96_006465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOR96_006470 PF07690 Major Facilitator Superfamily LOR96_006475 PF04055 Radical SAM superfamily LOR96_006480 PF01228 Glycine radical LOR96_006480 PF02901 Pyruvate formate lyase-like LOR96_006485 PF01226 Formate/nitrite transporter LOR96_006490 PF18381 YcaO cyclodehydratase C-terminal domain LOR96_006490 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LOR96_006495 PF00710 Asparaginase, N-terminal LOR96_006495 PF17763 Glutaminase/Asparaginase C-terminal domain LOR96_006500 PF00266 Aminotransferase class-V LOR96_006505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LOR96_006510 PF02224 Cytidylate kinase LOR96_006515 PF00575 S1 RNA binding domain LOR96_006520 PF00216 Bacterial DNA-binding protein LOR96_006525 PF03772 Competence protein LOR96_006525 PF00753 Metallo-beta-lactamase superfamily LOR96_006530 PF00664 ABC transporter transmembrane region LOR96_006530 PF00005 ABC transporter LOR96_006535 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LOR96_006540 PF07063 Domain of unknown function (DUF1338) LOR96_006545 PF00313 'Cold-shock' DNA-binding domain LOR96_006550 PF00313 'Cold-shock' DNA-binding domain LOR96_006555 PF03966 Trm112p-like protein LOR96_006560 PF02348 Cytidylyltransferase LOR96_006565 PF01636 Phosphotransferase enzyme family LOR96_006570 PF02698 DUF218 domain LOR96_006575 PF13847 Methyltransferase domain LOR96_006580 PF03882 MukF winged-helix domain LOR96_006580 PF17193 MukF C-terminal domain LOR96_006580 PF17192 MukF middle domain LOR96_006585 PF04288 MukE-like family LOR96_006590 PF04310 MukB N-terminal LOR96_006590 PF16330 MukB hinge domain LOR96_006595 PF01471 Putative peptidoglycan binding domain LOR96_006595 PF03734 L,D-transpeptidase catalytic domain LOR96_006600 PF05951 Bacterial protein of unknown function (DUF882) LOR96_006605 PF00753 Metallo-beta-lactamase superfamily LOR96_006610 PF00155 Aminotransferase class I and II LOR96_006615 PF00267 Gram-negative porin LOR96_006620 PF01336 OB-fold nucleic acid binding domain LOR96_006620 PF00152 tRNA synthetases class II (D, K and N) LOR96_006625 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LOR96_006625 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LOR96_006630 PF11940 Domain of unknown function (DUF3458) Ig-like fold LOR96_006630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LOR96_006630 PF01433 Peptidase family M1 domain LOR96_006635 PF01180 Dihydroorotate dehydrogenase LOR96_006640 PF07126 Cell-division protein ZapC LOR96_006645 PF03473 MOSC domain LOR96_006645 PF00111 2Fe-2S iron-sulfur cluster binding domain LOR96_006645 PF03476 MOSC N-terminal beta barrel domain LOR96_006650 PF01170 Putative RNA methylase family UPF0020 LOR96_006650 PF02926 THUMP domain LOR96_006650 PF10672 S-adenosylmethionine-dependent methyltransferase LOR96_006655 PF00005 ABC transporter LOR96_006655 PF16326 ABC transporter C-terminal domain LOR96_006655 PF12848 ABC transporter LOR96_006660 PF04403 Paraquat-inducible protein A LOR96_006665 PF02470 MlaD protein LOR96_006670 PF03886 ABC-type transport auxiliary lipoprotein component LOR96_006675 PF04957 Ribosome modulation factor LOR96_006680 PF07977 FabA-like domain LOR96_006685 PF05362 Lon protease (S16) C-terminal proteolytic domain LOR96_006685 PF13654 AAA domain LOR96_006690 PF17414 MatP C-terminal ribbon-helix-helix domain LOR96_006690 PF06303 MatP N-terminal domain LOR96_006695 PF00691 OmpA family LOR96_006695 PF01389 OmpA-like transmembrane domain LOR96_006700 PF03846 Cell division inhibitor SulA LOR96_006705 PF04994 TfoX C-terminal domain LOR96_006705 PF04993 TfoX N-terminal domain LOR96_006710 PF12805 FUSC-like inner membrane protein yccS LOR96_006715 PF03733 Inner membrane component domain LOR96_006720 PF00580 UvrD/REP helicase N-terminal domain LOR96_006720 PF13361 UvrD-like helicase C-terminal domain LOR96_006720 PF12462 DNA helicase IV / RNA helicase N terminal LOR96_006725 PF02142 MGS-like domain LOR96_006730 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LOR96_006735 PF13380 CoA binding domain LOR96_006740 PF08755 Hemimethylated DNA-binding protein YccV like LOR96_006745 PF10672 S-adenosylmethionine-dependent methyltransferase LOR96_006745 PF17785 PUA-like domain LOR96_006750 PF00708 Acylphosphatase LOR96_006755 PF04358 DsrC like protein LOR96_006765 PF00484 Carbonic anhydrase LOR96_006770 PF02080 TrkA-C domain LOR96_006770 PF03471 Transporter associated domain LOR96_006770 PF00999 Sodium/hydrogen exchanger family LOR96_006780 PF01757 Acyltransferase family LOR96_006785 PF04349 Periplasmic glucan biosynthesis protein, MdoG LOR96_006790 PF00535 Glycosyl transferase family 2 LOR96_006800 PF01797 Transposase IS200 like LOR96_006805 PF12323 Helix-turn-helix domain LOR96_006805 PF01385 Probable transposase LOR96_006805 PF07282 Putative transposase DNA-binding domain LOR96_006810 PF00854 POT family LOR96_006820 PF03279 Bacterial lipid A biosynthesis acyltransferase LOR96_006825 PF12368 Rhodanase C-terminal LOR96_006825 PF17773 UPF0176 acylphosphatase like domain LOR96_006825 PF00581 Rhodanese-like domain LOR96_006830 PF01594 AI-2E family transporter LOR96_006835 PF00196 Bacterial regulatory proteins, luxR family LOR96_006840 PF01266 FAD dependent oxidoreductase LOR96_006845 PF13991 BssS protein family LOR96_006850 PF06183 DinI-like family LOR96_006855 PF01979 Amidohydrolase family LOR96_006860 PF03992 Antibiotic biosynthesis monooxygenase LOR96_006870 PF00575 S1 RNA binding domain LOR96_006870 PF12111 Polyribonucleotide phosphorylase C terminal LOR96_006870 PF10150 Ribonuclease E/G family LOR96_006875 PF00849 RNA pseudouridylate synthase LOR96_006875 PF01479 S4 domain LOR96_006880 PF02545 Maf-like protein LOR96_006885 PF02620 Large ribosomal RNA subunit accumulation protein YceD LOR96_006890 PF01783 Ribosomal L32p protein family LOR96_006895 PF02504 Fatty acid synthesis protein LOR96_006900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOR96_006900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LOR96_006905 PF00698 Acyl transferase domain LOR96_006915 PF00550 Phosphopantetheine attachment site LOR96_006920 PF00109 Beta-ketoacyl synthase, N-terminal domain LOR96_006920 PF02801 Beta-ketoacyl synthase, C-terminal domain LOR96_006925 PF01063 Amino-transferase class IV LOR96_006930 PF02618 YceG-like family LOR96_006935 PF02223 Thymidylate kinase LOR96_006940 PF09115 DNA polymerase III, delta subunit, C terminal LOR96_006945 PF01026 TatD related DNase LOR96_006950 PF00367 phosphotransferase system, EIIB LOR96_006950 PF02378 Phosphotransferase system, EIIC LOR96_006955 PF01230 HIT domain LOR96_006960 PF07233 Protein of unknown function (DUF1425) LOR96_006965 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LOR96_006965 PF13036 Peptidoglycan-synthase activator LpoB LOR96_006970 PF01636 Phosphotransferase enzyme family LOR96_006975 PF00933 Glycosyl hydrolase family 3 N terminal domain LOR96_006980 PF05728 Uncharacterised protein family (UPF0227) LOR96_006985 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_006990 PF05433 Glycine zipper 2TM domain LOR96_006995 PF03461 TRCF domain LOR96_006995 PF17757 UvrB interaction domain LOR96_006995 PF00270 DEAD/DEAH box helicase LOR96_006995 PF00271 Helicase conserved C-terminal domain LOR96_006995 PF02559 CarD-like/TRCF domain LOR96_007000 PF02687 FtsX-like permease family LOR96_007000 PF12704 MacB-like periplasmic core domain LOR96_007005 PF00005 ABC transporter LOR96_007010 PF02687 FtsX-like permease family LOR96_007010 PF12704 MacB-like periplasmic core domain LOR96_007015 PF00480 ROK family LOR96_007020 PF02146 Sir2 family LOR96_007025 PF01546 Peptidase family M20/M25/M40 LOR96_007025 PF07687 Peptidase dimerisation domain LOR96_007030 PF08007 Cupin superfamily protein LOR96_007035 PF08918 PhoQ Sensor LOR96_007035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_007040 PF00072 Response regulator receiver domain LOR96_007040 PF00486 Transcriptional regulatory protein, C terminal LOR96_007050 PF08328 Adenylosuccinate lyase C-terminal LOR96_007050 PF00206 Lyase LOR96_007055 PF04356 Protein of unknown function (DUF489) LOR96_007065 PF00293 NUDIX domain LOR96_007070 PF00849 RNA pseudouridylate synthase LOR96_007075 PF00180 Isocitrate/isopropylmalate dehydrogenase LOR96_007080 PF03472 Autoinducer binding domain LOR96_007080 PF00196 Bacterial regulatory proteins, luxR family LOR96_007085 PF00765 Autoinducer synthase LOR96_007090 PF00232 Glycosyl hydrolase family 1 LOR96_007100 PF01432 Peptidase family M3 LOR96_007105 PF02203 Tar ligand binding domain homologue LOR96_007105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_007105 PF00672 HAMP domain LOR96_007125 PF01797 Transposase IS200 like LOR96_007130 PF07282 Putative transposase DNA-binding domain LOR96_007130 PF01385 Probable transposase LOR96_007130 PF12323 Helix-turn-helix domain LOR96_007140 PF00072 Response regulator receiver domain LOR96_007145 PF00989 PAS fold LOR96_007145 PF17203 Single cache domain 3 LOR96_007145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LOR96_007145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_007150 PF00939 Sodium:sulfate symporter transmembrane region LOR96_007155 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LOR96_007155 PF00413 Matrixin LOR96_007155 PF08548 Peptidase M10 serralysin C terminal LOR96_007160 PF02974 Protease inhibitor Inh LOR96_007165 PF00664 ABC transporter transmembrane region LOR96_007165 PF00005 ABC transporter LOR96_007170 PF00529 HlyD membrane-fusion protein of T1SS LOR96_007175 PF02321 Outer membrane efflux protein LOR96_007190 PF12833 Helix-turn-helix domain LOR96_007190 PF02311 AraC-like ligand binding domain LOR96_007195 PF02562 PhoH-like protein LOR96_007200 PF01699 Sodium/calcium exchanger protein LOR96_007205 PF08021 Siderophore-interacting FAD-binding domain LOR96_007205 PF04954 Siderophore-interacting protein LOR96_007210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LOR96_007210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_007210 PF00672 HAMP domain LOR96_007210 PF07730 Histidine kinase LOR96_007220 PF02322 Cytochrome bd terminal oxidase subunit II LOR96_007225 PF01654 Cytochrome bd terminal oxidase subunit I LOR96_007230 PF00155 Aminotransferase class I and II LOR96_007230 PF00392 Bacterial regulatory proteins, gntR family LOR96_007235 PF00202 Aminotransferase class-III LOR96_007240 PF04958 Arginine N-succinyltransferase beta subunit LOR96_007245 PF00171 Aldehyde dehydrogenase family LOR96_007250 PF04996 Succinylarginine dihydrolase LOR96_007260 PF00267 Gram-negative porin LOR96_007270 PF01979 Amidohydrolase family LOR96_007275 PF07702 UTRA domain LOR96_007275 PF00392 Bacterial regulatory proteins, gntR family LOR96_007280 PF01979 Amidohydrolase family LOR96_007285 PF05962 HutD LOR96_007290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_007290 PF03466 LysR substrate binding domain LOR96_007300 PF03824 High-affinity nickel-transport protein LOR96_007305 PF00708 Acylphosphatase LOR96_007305 PF17788 HypF Kae1-like domain LOR96_007305 PF01300 Telomere recombination LOR96_007305 PF07503 HypF finger LOR96_007310 PF01568 Molydopterin dinucleotide binding domain LOR96_007310 PF00384 Molybdopterin oxidoreductase LOR96_007310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOR96_007315 PF12800 4Fe-4S binding domain LOR96_007315 PF13247 4Fe-4S dicluster domain LOR96_007320 PF01750 Hydrogenase maturation protease LOR96_007325 PF07450 Formate hydrogenlyase maturation protein HycH LOR96_007330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LOR96_007335 PF12838 4Fe-4S dicluster domain LOR96_007340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LOR96_007340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LOR96_007340 PF00374 Nickel-dependent hydrogenase LOR96_007345 PF00146 NADH dehydrogenase LOR96_007350 PF00361 Proton-conducting membrane transporter LOR96_007355 PF13247 4Fe-4S dicluster domain LOR96_007360 PF11046 Transcriptional repressor of hyc and hyp operons LOR96_007365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LOR96_007370 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOR96_007375 PF01455 HupF/HypC family LOR96_007380 PF01924 Hydrogenase formation hypA family LOR96_007385 PF00586 AIR synthase related protein, N-terminal domain LOR96_007385 PF02769 AIR synthase related protein, C-terminal domain LOR96_007390 PF01590 GAF domain LOR96_007390 PF00158 Sigma-54 interaction domain LOR96_007390 PF02954 Bacterial regulatory protein, Fis family LOR96_007400 PF13954 PapC N-terminal domain LOR96_007400 PF00577 Outer membrane usher protein LOR96_007405 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_007405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_007420 PF12833 Helix-turn-helix domain LOR96_007425 PF01926 50S ribosome-binding GTPase LOR96_007425 PF06071 Protein of unknown function (DUF933) LOR96_007435 PF01195 Peptidyl-tRNA hydrolase LOR96_007440 PF10762 Protein of unknown function (DUF2583) LOR96_007445 PF14572 Phosphoribosyl synthetase-associated domain LOR96_007445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LOR96_007450 PF00288 GHMP kinases N terminal domain LOR96_007450 PF08544 GHMP kinases C terminal LOR96_007455 PF03550 Outer membrane lipoprotein LolB LOR96_007460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LOR96_007460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LOR96_007460 PF01488 Shikimate / quinate 5-dehydrogenase LOR96_007465 PF03462 PCRF domain LOR96_007465 PF00472 RF-1 domain LOR96_007470 PF13847 Methyltransferase domain LOR96_007470 PF17827 PrmC N-terminal domain LOR96_007475 PF04247 Invasion gene expression up-regulator, SirB LOR96_007480 PF13369 Transglutaminase-like superfamily LOR96_007485 PF00793 DAHP synthetase I family LOR96_007490 PF01740 STAS domain LOR96_007490 PF00916 Sulfate permease family LOR96_007495 PF00990 Diguanylate cyclase, GGDEF domain LOR96_007505 PF03009 Glycerophosphoryl diester phosphodiesterase family LOR96_007515 PF00854 POT family LOR96_007520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOR96_007525 PF02811 PHP domain LOR96_007530 PF02613 Nitrate reductase delta subunit LOR96_007535 PF07273 Protein of unknown function (DUF1439) LOR96_007545 PF07690 Major Facilitator Superfamily LOR96_007550 PF13302 Acetyltransferase (GNAT) domain LOR96_007555 PF04337 Protein of unknown function, DUF480 LOR96_007560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOR96_007565 PF03023 Lipid II flippase MurJ LOR96_007570 PF08479 POTRA domain, ShlB-type LOR96_007570 PF17287 POTRA domain LOR96_007570 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LOR96_007575 PF13332 Hemagglutinin repeat LOR96_007575 PF05860 haemagglutination activity domain LOR96_007585 PF03485 Arginyl tRNA synthetase N terminal domain LOR96_007585 PF05746 DALR anticodon binding domain LOR96_007585 PF00750 tRNA synthetases class I (R) LOR96_007590 PF06185 YecM protein LOR96_007595 PF03932 CutC family LOR96_007600 PF08003 Protein of unknown function (DUF1698) LOR96_007605 PF13649 Methyltransferase domain LOR96_007610 PF01124 MAPEG family LOR96_007615 PF01904 Protein of unknown function DUF72 LOR96_007625 PF02938 GAD domain LOR96_007625 PF00152 tRNA synthetases class II (D, K and N) LOR96_007625 PF01336 OB-fold nucleic acid binding domain LOR96_007630 PF00293 NUDIX domain LOR96_007635 PF01709 Transcriptional regulator LOR96_007640 PF02075 Crossover junction endodeoxyribonuclease RuvC LOR96_007645 PF07499 RuvA, C-terminal domain LOR96_007645 PF01330 RuvA N terminal domain LOR96_007650 PF17864 RuvB AAA lid domain LOR96_007650 PF05491 RuvB C-terminal winged helix domain LOR96_007650 PF05496 Holliday junction DNA helicase RuvB P-loop domain LOR96_007655 PF00854 POT family LOR96_007660 PF00950 ABC 3 transport family LOR96_007665 PF00005 ABC transporter LOR96_007670 PF01297 Zinc-uptake complex component A periplasmic LOR96_007675 PF08525 Opacity-associated protein A N-terminal motif LOR96_007675 PF01551 Peptidase family M23 LOR96_007675 PF01476 LysM domain LOR96_007680 PF03279 Bacterial lipid A biosynthesis acyltransferase LOR96_007685 PF02887 Pyruvate kinase, alpha/beta domain LOR96_007685 PF00224 Pyruvate kinase, barrel domain LOR96_007690 PF01380 SIS domain LOR96_007690 PF01418 Helix-turn-helix domain, rpiR family LOR96_007695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LOR96_007695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LOR96_007700 PF01081 KDPG and KHG aldolase LOR96_007705 PF00893 Small Multidrug Resistance protein LOR96_007710 PF00893 Small Multidrug Resistance protein LOR96_007715 PF01042 Endoribonuclease L-PSP LOR96_007720 PF04851 Type III restriction enzyme, res subunit LOR96_007720 PF13307 Helicase C-terminal domain LOR96_007725 PF00814 Glycoprotease family LOR96_007730 PF03843 Outer membrane lipoprotein Slp family LOR96_007735 PF00501 AMP-binding enzyme LOR96_007735 PF13193 AMP-binding enzyme C-terminal domain LOR96_007740 PF01612 3'-5' exonuclease LOR96_007740 PF00570 HRDC domain LOR96_007745 PF03776 Septum formation topological specificity factor MinE LOR96_007750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LOR96_007755 PF05209 Septum formation inhibitor MinC, N-terminal domain LOR96_007755 PF03775 Septum formation inhibitor MinC, C-terminal domain LOR96_007760 PF05166 YcgL domain LOR96_007765 PF01557 Fumarylacetoacetate (FAA) hydrolase family LOR96_007770 PF03692 Putative zinc- or iron-chelating domain LOR96_007785 PF02600 Disulfide bond formation protein DsbB LOR96_007790 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LOR96_007795 PF00392 Bacterial regulatory proteins, gntR family LOR96_007795 PF07840 FadR C-terminal domain LOR96_007800 PF04293 SpoVR like protein LOR96_007805 PF01266 FAD dependent oxidoreductase LOR96_007810 PF01168 Alanine racemase, N-terminal domain LOR96_007810 PF00842 Alanine racemase, C-terminal domain LOR96_007815 PF07690 Major Facilitator Superfamily LOR96_007825 PF13426 PAS domain LOR96_007825 PF00990 Diguanylate cyclase, GGDEF domain LOR96_007825 PF00563 EAL domain LOR96_007830 PF03466 LysR substrate binding domain LOR96_007830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_007835 PF03306 Alpha-acetolactate decarboxylase LOR96_007840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOR96_007840 PF00205 Thiamine pyrophosphate enzyme, central domain LOR96_007840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOR96_007845 PF04285 Protein of unknown function (DUF444) LOR96_007850 PF08298 PrkA AAA domain LOR96_007850 PF06798 PrkA serine protein kinase C-terminal domain LOR96_007860 PF06629 MltA-interacting protein MipA LOR96_007865 PF00884 Sulfatase LOR96_007870 PF01263 Aldose 1-epimerase LOR96_007875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOR96_007875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOR96_007880 PF01641 SelR domain LOR96_007885 PF07023 Protein of unknown function (DUF1315) LOR96_007890 PF00857 Isochorismatase family LOR96_007895 PF17763 Glutaminase/Asparaginase C-terminal domain LOR96_007895 PF00710 Asparaginase, N-terminal LOR96_007900 PF01343 Peptidase family S49 LOR96_007905 PF00881 Nitroreductase family LOR96_007910 PF00586 AIR synthase related protein, N-terminal domain LOR96_007910 PF02769 AIR synthase related protein, C-terminal domain LOR96_007915 PF01131 DNA topoisomerase LOR96_007915 PF01751 Toprim domain LOR96_007920 PF07383 Protein of unknown function (DUF1496) LOR96_007925 PF00293 NUDIX domain LOR96_007930 PF03372 Endonuclease/Exonuclease/phosphatase family LOR96_007940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_007940 PF03466 LysR substrate binding domain LOR96_007960 PF00551 Formyl transferase LOR96_007960 PF01842 ACT domain LOR96_007965 PF02810 SEC-C motif LOR96_007970 PF01734 Patatin-like phospholipase LOR96_007975 PF00072 Response regulator receiver domain LOR96_007980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LOR96_007980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LOR96_007980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LOR96_007985 PF00816 H-NS histone family LOR96_007990 PF00265 Thymidine kinase LOR96_007995 PF00171 Aldehyde dehydrogenase family LOR96_007995 PF00465 Iron-containing alcohol dehydrogenase LOR96_008005 PF01914 MarC family integral membrane protein LOR96_008010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_008015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_008020 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_008025 PF12911 N-terminal TM domain of oligopeptide transport permease C LOR96_008025 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_008030 PF00005 ABC transporter LOR96_008030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_008035 PF00005 ABC transporter LOR96_008035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_008040 PF04269 Protein of unknown function, DUF440 LOR96_008045 PF13091 PLD-like domain LOR96_008045 PF13396 Phospholipase_D-nuclease N-terminal LOR96_008065 PF03795 YCII-related domain LOR96_008080 PF00486 Transcriptional regulatory protein, C terminal LOR96_008090 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_008090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_008095 PF00577 Outer membrane usher protein LOR96_008095 PF13953 PapC C-terminal domain LOR96_008095 PF13954 PapC N-terminal domain LOR96_008115 PF03544 Gram-negative bacterial TonB protein C-terminal LOR96_008120 PF03061 Thioesterase superfamily LOR96_008125 PF04279 Intracellular septation protein A LOR96_008130 PF01740 STAS domain LOR96_008130 PF00916 Sulfate permease family LOR96_008140 PF03692 Putative zinc- or iron-chelating domain LOR96_008145 PF03922 OmpW family LOR96_008155 PF00290 Tryptophan synthase alpha chain LOR96_008160 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_008165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LOR96_008165 PF00218 Indole-3-glycerol phosphate synthase LOR96_008170 PF00591 Glycosyl transferase family, a/b domain LOR96_008170 PF02885 Glycosyl transferase family, helical bundle domain LOR96_008175 PF00117 Glutamine amidotransferase class-I LOR96_008180 PF04715 Anthranilate synthase component I, N terminal region LOR96_008180 PF00425 chorismate binding enzyme LOR96_008185 PF02811 PHP domain LOR96_008190 PF01300 Telomere recombination LOR96_008210 PF00849 RNA pseudouridylate synthase LOR96_008210 PF01479 S4 domain LOR96_008215 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LOR96_008220 PF00106 short chain dehydrogenase LOR96_008225 PF01343 Peptidase family S49 LOR96_008225 PF08496 Peptidase family S49 N-terminal LOR96_008230 PF10692 Protein of unknown function (DUF2498) LOR96_008235 PF01751 Toprim domain LOR96_008235 PF08272 Topoisomerase I zinc-ribbon-like LOR96_008235 PF01131 DNA topoisomerase LOR96_008235 PF01396 Topoisomerase DNA binding C4 zinc finger LOR96_008240 PF03466 LysR substrate binding domain LOR96_008240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_008255 PF00330 Aconitase family (aconitate hydratase) LOR96_008255 PF00694 Aconitase C-terminal domain LOR96_008260 PF00925 GTP cyclohydrolase II LOR96_008265 PF01569 PAP2 superfamily LOR96_008270 PF06305 Lipopolysaccharide assembly protein A domain LOR96_008275 PF18073 Rubredoxin metal binding domain LOR96_008285 PF07338 Protein of unknown function (DUF1471) LOR96_008290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LOR96_008295 PF01253 Translation initiation factor SUI1 LOR96_008300 PF05433 Glycine zipper 2TM domain LOR96_008305 PF00923 Transaldolase/Fructose-6-phosphate aldolase LOR96_008310 PF00563 EAL domain LOR96_008310 PF00990 Diguanylate cyclase, GGDEF domain LOR96_008310 PF05231 MASE1 LOR96_008310 PF08447 PAS fold LOR96_008310 PF08448 PAS fold LOR96_008310 PF13426 PAS domain LOR96_008315 PF00575 S1 RNA binding domain LOR96_008315 PF08206 Ribonuclease B OB domain LOR96_008315 PF00773 RNB domain LOR96_008320 PF10576 Iron-sulfur binding domain of endonuclease III LOR96_008320 PF00633 Helix-hairpin-helix motif LOR96_008320 PF00730 HhH-GPD superfamily base excision DNA repair protein LOR96_008325 PF02508 Rnf-Nqr subunit, membrane protein LOR96_008330 PF04205 FMN-binding domain LOR96_008335 PF03116 NQR2, RnfD, RnfE family LOR96_008340 PF12833 Helix-turn-helix domain LOR96_008340 PF06445 GyrI-like small molecule binding domain LOR96_008345 PF10531 SLBB domain LOR96_008345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LOR96_008345 PF13237 4Fe-4S dicluster domain LOR96_008345 PF13375 RnfC Barrel sandwich hybrid domain LOR96_008350 PF04060 Putative Fe-S cluster LOR96_008355 PF02508 Rnf-Nqr subunit, membrane protein LOR96_008360 PF10754 Protein of unknown function (DUF2569) LOR96_008365 PF01268 Formate--tetrahydrofolate ligase LOR96_008370 PF09313 Domain of unknown function (DUF1971) LOR96_008370 PF03848 Tellurite resistance protein TehB LOR96_008375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOR96_008375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LOR96_008380 PF13593 SBF-like CPA transporter family (DUF4137) LOR96_008385 PF00962 Adenosine/AMP deaminase LOR96_008390 PF06097 Bacterial protein of unknown function (DUF945) LOR96_008395 PF01238 Phosphomannose isomerase type I LOR96_008400 PF10415 Fumarase C C-terminus LOR96_008400 PF00206 Lyase LOR96_008405 PF05472 DNA replication terminus site-binding protein (Ter protein) LOR96_008410 PF00480 ROK family LOR96_008420 PF00654 Voltage gated chloride channel LOR96_008425 PF06649 Protein of unknown function (DUF1161) LOR96_008430 PF06932 Protein of unknown function (DUF1283) LOR96_008435 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LOR96_008440 PF00106 short chain dehydrogenase LOR96_008445 PF01510 N-acetylmuramoyl-L-alanine amidase LOR96_008465 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LOR96_008465 PF01048 Phosphorylase superfamily LOR96_008505 PF13419 Haloacid dehalogenase-like hydrolase LOR96_008515 PF06445 GyrI-like small molecule binding domain LOR96_008520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LOR96_008520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LOR96_008525 PF00027 Cyclic nucleotide-binding domain LOR96_008525 PF13545 Crp-like helix-turn-helix domain LOR96_008530 PF00582 Universal stress protein family LOR96_008540 PF00455 DeoR C terminal sensor domain LOR96_008540 PF08220 DeoR-like helix-turn-helix domain LOR96_008545 PF03611 PTS system sugar-specific permease component LOR96_008550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOR96_008555 PF00596 Class II Aldolase and Adducin N-terminal domain LOR96_008560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LOR96_008565 PF01261 Xylose isomerase-like TIM barrel LOR96_008570 PF02233 NAD(P) transhydrogenase beta subunit LOR96_008575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LOR96_008575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LOR96_008575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LOR96_008580 PF07338 Protein of unknown function (DUF1471) LOR96_008585 PF13520 Amino acid permease LOR96_008595 PF00486 Transcriptional regulatory protein, C terminal LOR96_008595 PF00072 Response regulator receiver domain LOR96_008600 PF00672 HAMP domain LOR96_008600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_008600 PF00512 His Kinase A (phospho-acceptor) domain LOR96_008605 PF00080 Copper/zinc superoxide dismutase (SODC) LOR96_008610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOR96_008615 PF12833 Helix-turn-helix domain LOR96_008620 PF01161 Phosphatidylethanolamine-binding protein LOR96_008625 PF06392 Acid shock protein repeat LOR96_008630 PF00089 Trypsin LOR96_008635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LOR96_008635 PF11898 Domain of unknown function (DUF3418) LOR96_008635 PF04408 Helicase associated domain (HA2) LOR96_008635 PF00271 Helicase conserved C-terminal domain LOR96_008635 PF00270 DEAD/DEAH box helicase LOR96_008640 PF02525 Flavodoxin-like fold LOR96_008645 PF07027 Protein of unknown function (DUF1318) LOR96_008650 PF13617 YnbE-like lipoprotein LOR96_008660 PF11739 Dicarboxylate transport LOR96_008665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOR96_008665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOR96_008670 PF03724 META domain LOR96_008675 PF03891 Domain of unknown function (DUF333) LOR96_008680 PF02308 MgtC family LOR96_008685 PF00893 Small Multidrug Resistance protein LOR96_008690 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LOR96_008690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOR96_008690 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LOR96_008690 PF10371 Domain of unknown function LOR96_008690 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LOR96_008695 PF01171 PP-loop family LOR96_008700 PF01544 CorA-like Mg2+ transporter protein LOR96_008705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_008710 PF00246 Zinc carboxypeptidase LOR96_008715 PF13378 Enolase C-terminal domain-like LOR96_008715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LOR96_008720 PF08534 Redoxin LOR96_008725 PF00158 Sigma-54 interaction domain LOR96_008725 PF18024 Helix-turn-helix domain LOR96_008730 PF09722 Protein of unknown function (DUF2384) LOR96_008735 PF08808 RES domain LOR96_008740 PF05128 Domain of unknown function (DUF697) LOR96_008745 PF04317 YcjX-like family, DUF463 LOR96_008750 PF09584 Phage shock protein PspD (Phageshock_PspD) LOR96_008755 PF04024 PspC domain LOR96_008760 PF06667 Phage shock protein B LOR96_008765 PF04012 PspA/IM30 family LOR96_008770 PF02954 Bacterial regulatory protein, Fis family LOR96_008770 PF00158 Sigma-54 interaction domain LOR96_008780 PF02917 Pertussis toxin, subunit 1 LOR96_008785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_008790 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_008795 PF12911 N-terminal TM domain of oligopeptide transport permease C LOR96_008795 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_008800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_008800 PF00005 ABC transporter LOR96_008805 PF00005 ABC transporter LOR96_008815 PF00854 POT family LOR96_008825 PF00226 DnaJ domain LOR96_008825 PF01556 DnaJ C terminal domain LOR96_008835 PF04893 Yip1 domain LOR96_008845 PF11656 YjbD family (DUF3811) LOR96_008850 PF02798 Glutathione S-transferase, N-terminal domain LOR96_008850 PF00043 Glutathione S-transferase, C-terminal domain LOR96_008855 PF08543 Phosphomethylpyrimidine kinase LOR96_008860 PF01479 S4 domain LOR96_008860 PF00579 tRNA synthetases class I (W and Y) LOR96_008865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LOR96_008865 PF01243 Pyridoxamine 5'-phosphate oxidase LOR96_008870 PF03702 Anhydro-N-acetylmuramic acid kinase LOR96_008875 PF05433 Glycine zipper 2TM domain LOR96_008880 PF01047 MarR family LOR96_008890 PF00248 Aldo/keto reductase family LOR96_008895 PF06945 Protein of unknown function (DUF1289) LOR96_008900 PF00884 Sulfatase LOR96_008900 PF08019 Phosphoethanolamine transferase EptA/EptB LOR96_008905 PF16925 Tetracyclin repressor-like, C-terminal domain LOR96_008905 PF00440 Bacterial regulatory proteins, tetR family LOR96_008910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LOR96_008915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOR96_008920 PF00929 Exonuclease LOR96_008925 PF00462 Glutaredoxin LOR96_008930 PF00877 NlpC/P60 family LOR96_008935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LOR96_008935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LOR96_008945 PF00356 Bacterial regulatory proteins, lacI family LOR96_008950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_008950 PF03466 LysR substrate binding domain LOR96_008955 PF07690 Major Facilitator Superfamily LOR96_008965 PF00677 Lumazine binding domain LOR96_008970 PF01554 MatE LOR96_008990 PF00224 Pyruvate kinase, barrel domain LOR96_008990 PF02887 Pyruvate kinase, alpha/beta domain LOR96_008995 PF04728 Lipoprotein leucine-zipper LOR96_009000 PF17969 L,D-transpeptidase C-terminal domain LOR96_009000 PF01476 LysM domain LOR96_009000 PF03734 L,D-transpeptidase catalytic domain LOR96_009005 PF02657 Fe-S metabolism associated domain LOR96_009010 PF00266 Aminotransferase class-V LOR96_009015 PF01458 Uncharacterized protein family (UPF0051) LOR96_009020 PF00005 ABC transporter LOR96_009025 PF01458 Uncharacterized protein family (UPF0051) LOR96_009030 PF01521 Iron-sulphur cluster biosynthesis LOR96_009035 PF03061 Thioesterase superfamily LOR96_009040 PF02913 FAD linked oxidases, C-terminal domain LOR96_009040 PF01565 FAD binding domain LOR96_009040 PF13183 4Fe-4S dicluster domain LOR96_009045 PF01594 AI-2E family transporter LOR96_009055 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LOR96_009055 PF02896 PEP-utilising enzyme, TIM barrel domain LOR96_009055 PF00391 PEP-utilising enzyme, mobile domain LOR96_009060 PF03618 Kinase/pyrophosphorylase LOR96_009065 PF00793 DAHP synthetase I family LOR96_009070 PF10636 Hemin uptake protein hemP LOR96_009075 PF07715 TonB-dependent Receptor Plug Domain LOR96_009075 PF00593 TonB dependent receptor LOR96_009080 PF05171 Haemin-degrading HemS.ChuX domain LOR96_009085 PF01497 Periplasmic binding protein LOR96_009090 PF01032 FecCD transport family LOR96_009095 PF00005 ABC transporter LOR96_009100 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LOR96_009105 PF03099 Biotin/lipoate A/B protein ligase family LOR96_009105 PF10437 Bacterial lipoate protein ligase C-terminus LOR96_009110 PF00877 NlpC/P60 family LOR96_009120 PF00892 EamA-like transporter family LOR96_009125 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LOR96_009130 PF01522 Polysaccharide deacetylase LOR96_009135 PF01370 NAD dependent epimerase/dehydratase family LOR96_009135 PF02911 Formyl transferase, C-terminal domain LOR96_009135 PF00551 Formyl transferase LOR96_009140 PF00535 Glycosyl transferase family 2 LOR96_009145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LOR96_009150 PF00005 ABC transporter LOR96_009155 PF01032 FecCD transport family LOR96_009160 PF00145 C-5 cytosine-specific DNA methylase LOR96_009160 PF13411 MerR HTH family regulatory protein LOR96_009165 PF09553 Eco47II restriction endonuclease LOR96_009200 PF02661 Fic/DOC family LOR96_009215 PF05154 TM2 domain LOR96_009220 PF00216 Bacterial DNA-binding protein LOR96_009225 PF03483 B3/4 domain LOR96_009225 PF03484 tRNA synthetase B5 domain LOR96_009225 PF03147 Ferredoxin-fold anticodon binding domain LOR96_009225 PF01588 Putative tRNA binding domain LOR96_009225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LOR96_009230 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LOR96_009230 PF01409 tRNA synthetases class II core domain (F) LOR96_009235 PF00453 Ribosomal protein L20 LOR96_009240 PF01632 Ribosomal protein L35 LOR96_009245 PF00707 Translation initiation factor IF-3, C-terminal domain LOR96_009245 PF05198 Translation initiation factor IF-3, N-terminal domain LOR96_009250 PF03129 Anticodon binding domain LOR96_009250 PF02824 TGS domain LOR96_009250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOR96_009250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOR96_009280 PF01914 MarC family integral membrane protein LOR96_009285 PF01464 Transglycosylase SLT domain LOR96_009290 PF01297 Zinc-uptake complex component A periplasmic LOR96_009295 PF00005 ABC transporter LOR96_009300 PF00950 ABC 3 transport family LOR96_009305 PF00950 ABC 3 transport family LOR96_009310 PF03881 Fructosamine kinase LOR96_009315 PF14002 YniB-like protein LOR96_009320 PF13419 Haloacid dehalogenase-like hydrolase LOR96_009325 PF04307 LexA-binding, inner membrane-associated putative hydrolase LOR96_009330 PF00375 Sodium:dicarboxylate symporter family LOR96_009335 PF01510 N-acetylmuramoyl-L-alanine amidase LOR96_009340 PF09339 IclR helix-turn-helix domain LOR96_009340 PF01614 Bacterial transcriptional regulator LOR96_009345 PF07690 Major Facilitator Superfamily LOR96_009355 PF01435 Peptidase family M48 LOR96_009360 PF11818 C-terminal domain of tail specific protease (DUF3340) LOR96_009360 PF00595 PDZ domain LOR96_009360 PF03572 Peptidase family S41 LOR96_009360 PF17804 Tail specific protease N-terminal domain LOR96_009365 PF04352 ProQ/FINO family LOR96_009365 PF17516 ProQ C-terminal domain LOR96_009370 PF13185 GAF domain LOR96_009375 PF04403 Paraquat-inducible protein A LOR96_009380 PF02470 MlaD protein LOR96_009385 PF00990 Diguanylate cyclase, GGDEF domain LOR96_009385 PF00360 Phytochrome region LOR96_009385 PF00563 EAL domain LOR96_009385 PF01590 GAF domain LOR96_009390 PF07351 Protein of unknown function (DUF1480) LOR96_009415 PF05643 Putative bacterial lipoprotein (DUF799) LOR96_009425 PF03783 Curli production assembly/transport component CsgG LOR96_009430 PF10753 Toxin GhoT_OrtT LOR96_009450 PF00144 Beta-lactamase LOR96_009595 PF00959 Phage lysozyme LOR96_009600 PF04971 Bacteriophage P21 holin S LOR96_009620 PF07102 Protein of unknown function (DUF1364) LOR96_009630 PF05063 MT-A70 LOR96_009635 PF01555 DNA methylase LOR96_009645 PF17854 FtsK alpha domain LOR96_009645 PF01580 FtsK/SpoIIIE family LOR96_009645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LOR96_009645 PF09397 Ftsk gamma domain LOR96_009685 PF00717 Peptidase S24-like LOR96_009685 PF01381 Helix-turn-helix LOR96_009750 PF07825 Excisionase-like protein LOR96_009760 PF10709 Protein of unknown function (DUF2511) LOR96_009765 PF05425 Copper resistance protein D LOR96_009770 PF04234 CopC domain LOR96_009775 PF00210 Ferritin-like domain LOR96_009780 PF06440 DNA polymerase III, theta subunit LOR96_009785 PF00561 alpha/beta hydrolase fold LOR96_009795 PF00326 Prolyl oligopeptidase family LOR96_009795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LOR96_009800 PF13995 YebF-like protein LOR96_009805 PF04266 ASCH domain LOR96_009810 PF07130 YebG protein LOR96_009815 PF00271 Helicase conserved C-terminal domain LOR96_009815 PF03880 DbpA RNA binding domain LOR96_009815 PF00270 DEAD/DEAH box helicase LOR96_009820 PF02222 ATP-grasp domain LOR96_009825 PF03701 Uncharacterised protein family (UPF0181) LOR96_009830 PF04715 Anthranilate synthase component I, N terminal region LOR96_009830 PF00425 chorismate binding enzyme LOR96_009835 PF00293 NUDIX domain LOR96_009840 PF03313 Serine dehydratase alpha chain LOR96_009840 PF03315 Serine dehydratase beta chain LOR96_009845 PF03471 Transporter associated domain LOR96_009845 PF03741 Integral membrane protein TerC family LOR96_009850 PF03610 PTS system fructose IIA component LOR96_009850 PF03830 PTS system sorbose subfamily IIB component LOR96_009855 PF03609 PTS system sorbose-specific iic component LOR96_009860 PF03613 PTS system mannose/fructose/sorbose family IID component LOR96_009865 PF06173 Protein of unknown function (DUF986) LOR96_009870 PF02659 Putative manganese efflux pump LOR96_009875 PF02441 Flavoprotein LOR96_009890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOR96_009890 PF02770 Acyl-CoA dehydrogenase, middle domain LOR96_009890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOR96_009900 PF00732 GMC oxidoreductase LOR96_009900 PF05199 GMC oxidoreductase LOR96_009905 PF00501 AMP-binding enzyme LOR96_009905 PF13193 AMP-binding enzyme C-terminal domain LOR96_009905 PF00668 Condensation domain LOR96_009905 PF00550 Phosphopantetheine attachment site LOR96_009910 PF07690 Major Facilitator Superfamily LOR96_009930 PF13847 Methyltransferase domain LOR96_009935 PF00905 Penicillin binding protein transpeptidase domain LOR96_009935 PF03717 Penicillin-binding Protein dimerisation domain LOR96_009940 PF02578 Multi-copper polyphenol oxidoreductase laccase LOR96_009945 PF00313 'Cold-shock' DNA-binding domain LOR96_009950 PF10736 Protein of unknown function (DUF2627) LOR96_009955 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LOR96_009960 PF00324 Amino acid permease LOR96_009975 PF13974 YebO-like protein LOR96_009980 PF13998 MgrB protein LOR96_009985 PF13996 YobH-like protein LOR96_009990 PF10964 Protein of unknown function (DUF2766) LOR96_009995 PF12833 Helix-turn-helix domain LOR96_010010 PF13520 Amino acid permease LOR96_010015 PF00664 ABC transporter transmembrane region LOR96_010015 PF00005 ABC transporter LOR96_010025 PF00563 EAL domain LOR96_010025 PF01590 GAF domain LOR96_010025 PF00990 Diguanylate cyclase, GGDEF domain LOR96_010025 PF00360 Phytochrome region LOR96_010030 PF03372 Endonuclease/Exonuclease/phosphatase family LOR96_010040 PF06411 HdeA/HdeB family LOR96_010045 PF01820 D-ala D-ala ligase N-terminus LOR96_010045 PF07478 D-ala D-ala ligase C-terminus LOR96_010060 PF08241 Methyltransferase domain LOR96_010065 PF00313 'Cold-shock' DNA-binding domain LOR96_010070 PF00313 'Cold-shock' DNA-binding domain LOR96_010075 PF00313 'Cold-shock' DNA-binding domain LOR96_010085 PF04794 YdjC-like protein LOR96_010090 PF07883 Cupin domain LOR96_010090 PF12833 Helix-turn-helix domain LOR96_010095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LOR96_010100 PF00232 Glycosyl hydrolase family 1 LOR96_010105 PF02378 Phosphotransferase system, EIIC LOR96_010110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LOR96_010115 PF00849 RNA pseudouridylate synthase LOR96_010115 PF01479 S4 domain LOR96_010125 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LOR96_010130 PF03553 Na+/H+ antiporter family LOR96_010140 PF13520 Amino acid permease LOR96_010155 PF00849 RNA pseudouridylate synthase LOR96_010160 PF00282 Pyridoxal-dependent decarboxylase conserved domain LOR96_010165 PF13520 Amino acid permease LOR96_010170 PF04960 Glutaminase LOR96_010200 PF13673 Acetyltransferase (GNAT) domain LOR96_010210 PF00034 Cytochrome c LOR96_010210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOR96_010220 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_010225 PF00005 ABC transporter LOR96_010235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_010235 PF00672 HAMP domain LOR96_010235 PF02203 Tar ligand binding domain homologue LOR96_010240 PF13276 HTH-like domain LOR96_010240 PF00665 Integrase core domain LOR96_010240 PF13333 Integrase core domain LOR96_010260 PF01066 CDP-alcohol phosphatidyltransferase LOR96_010265 PF02151 UvrB/uvrC motif LOR96_010265 PF08459 UvrC Helix-hairpin-helix N-terminal LOR96_010265 PF01541 GIY-YIG catalytic domain LOR96_010270 PF00196 Bacterial regulatory proteins, luxR family LOR96_010270 PF00072 Response regulator receiver domain LOR96_010275 PF10769 Protein of unknown function (DUF2594) LOR96_010295 PF00324 Amino acid permease LOR96_010300 PF01276 Orn/Lys/Arg decarboxylase, major domain LOR96_010300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LOR96_010300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LOR96_010305 PF13520 Amino acid permease LOR96_010310 PF18500 CadC C-terminal domain 1 LOR96_010310 PF00486 Transcriptional regulatory protein, C terminal LOR96_010315 PF00474 Sodium:solute symporter family LOR96_010320 PF00171 Aldehyde dehydrogenase family LOR96_010320 PF01619 Proline dehydrogenase LOR96_010320 PF14850 DNA-binding domain of Proline dehydrogenase LOR96_010320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LOR96_010325 PF00005 ABC transporter LOR96_010330 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_010335 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_010340 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_010345 PF02899 Phage integrase, N-terminal SAM-like domain LOR96_010350 PF04542 Sigma-70 region 2 LOR96_010350 PF04545 Sigma-70, region 4 LOR96_010350 PF04539 Sigma-70 region 3 LOR96_010355 PF00669 Bacterial flagellin N-terminal helical region LOR96_010355 PF08884 Flagellin D3 domain LOR96_010355 PF00700 Bacterial flagellin C-terminal helical region LOR96_010360 PF08884 Flagellin D3 domain LOR96_010360 PF00669 Bacterial flagellin N-terminal helical region LOR96_010360 PF00700 Bacterial flagellin C-terminal helical region LOR96_010365 PF08884 Flagellin D3 domain LOR96_010365 PF00700 Bacterial flagellin C-terminal helical region LOR96_010365 PF00669 Bacterial flagellin N-terminal helical region LOR96_010370 PF07196 Flagellin hook IN motif LOR96_010370 PF07195 Flagellar hook-associated protein 2 C-terminus LOR96_010370 PF02465 Flagellar hook-associated protein 2 N-terminus LOR96_010375 PF02561 Flagellar protein FliS LOR96_010380 PF05400 Flagellar protein FliT LOR96_010385 PF12833 Helix-turn-helix domain LOR96_010390 PF01966 HD domain LOR96_010395 PF07885 Ion channel LOR96_010395 PF02254 TrkA-N domain LOR96_010400 PF01223 DNA/RNA non-specific endonuclease LOR96_010410 PF02049 Flagellar hook-basal body complex protein FliE LOR96_010415 PF01514 Secretory protein of YscJ/FliF family LOR96_010415 PF08345 Flagellar M-ring protein C-terminal LOR96_010420 PF01706 FliG C-terminal domain LOR96_010420 PF14842 FliG N-terminal domain LOR96_010420 PF14841 FliG middle domain LOR96_010425 PF02108 Flagellar assembly protein FliH LOR96_010430 PF18269 T3SS EscN ATPase C-terminal domain LOR96_010430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOR96_010435 PF02050 Flagellar FliJ protein LOR96_010440 PF02120 Flagellar hook-length control protein FliK LOR96_010445 PF03748 Flagellar basal body-associated protein FliL LOR96_010450 PF02154 Flagellar motor switch protein FliM LOR96_010450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LOR96_010455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LOR96_010455 PF16973 Flagellar motor switch protein FliN N-terminal LOR96_010460 PF04347 Flagellar biosynthesis protein, FliO LOR96_010465 PF00813 FliP family LOR96_010470 PF01313 Bacterial export proteins, family 3 LOR96_010475 PF01311 Bacterial export proteins, family 1 LOR96_010480 PF00669 Bacterial flagellin N-terminal helical region LOR96_010485 PF00460 Flagella basal body rod protein LOR96_010485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOR96_010490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LOR96_010490 PF10135 Rod binding protein LOR96_010495 PF02119 Flagellar P-ring protein LOR96_010500 PF02107 Flagellar L-ring protein LOR96_010505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOR96_010505 PF00460 Flagella basal body rod protein LOR96_010510 PF00460 Flagella basal body rod protein LOR96_010510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOR96_010515 PF07559 Flagellar basal body protein FlaE LOR96_010515 PF00460 Flagella basal body rod protein LOR96_010515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOR96_010520 PF03963 Flagellar hook capping protein - N-terminal region LOR96_010520 PF13860 FlgD Ig-like domain LOR96_010520 PF13861 FlgD Tudor-like domain LOR96_010525 PF00460 Flagella basal body rod protein LOR96_010525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOR96_010530 PF00460 Flagella basal body rod protein LOR96_010535 PF17656 FlgA N-terminal domain LOR96_010535 PF13144 Chaperone for flagella basal body P-ring formation LOR96_010540 PF04316 Anti-sigma-28 factor, FlgM LOR96_010545 PF05130 FlgN protein LOR96_010550 PF06366 Flagellar protein FlhE LOR96_010555 PF00771 FHIPEP family LOR96_010560 PF01312 FlhB HrpN YscU SpaS Family LOR96_010565 PF01483 Proprotein convertase P-domain LOR96_010565 PF00082 Subtilase family LOR96_010570 PF00196 Bacterial regulatory proteins, luxR family LOR96_010580 PF00419 Fimbrial protein LOR96_010585 PF00577 Outer membrane usher protein LOR96_010585 PF13954 PapC N-terminal domain LOR96_010585 PF13953 PapC C-terminal domain LOR96_010590 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_010590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_010600 PF00419 Fimbrial protein LOR96_010630 PF04344 Chemotaxis phosphatase, CheZ LOR96_010635 PF00072 Response regulator receiver domain LOR96_010640 PF01339 CheB methylesterase LOR96_010640 PF00072 Response regulator receiver domain LOR96_010645 PF01739 CheR methyltransferase, SAM binding domain LOR96_010645 PF03705 CheR methyltransferase, all-alpha domain LOR96_010650 PF02203 Tar ligand binding domain homologue LOR96_010650 PF00672 HAMP domain LOR96_010650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_010655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_010655 PF00672 HAMP domain LOR96_010655 PF02203 Tar ligand binding domain homologue LOR96_010660 PF01584 CheW-like domain LOR96_010665 PF02895 Signal transducing histidine kinase, homodimeric domain LOR96_010665 PF09078 CheY binding LOR96_010665 PF01584 CheW-like domain LOR96_010665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_010665 PF01627 Hpt domain LOR96_010670 PF00691 OmpA family LOR96_010670 PF13677 Membrane MotB of proton-channel complex MotA/MotB LOR96_010675 PF01618 MotA/TolQ/ExbB proton channel family LOR96_010680 PF05280 Flagellar transcriptional activator (FlhC) LOR96_010685 PF05247 Flagellar transcriptional activator (FlhD) LOR96_010690 PF00582 Universal stress protein family LOR96_010695 PF02308 MgtC family LOR96_010700 PF02203 Tar ligand binding domain homologue LOR96_010700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_010700 PF00672 HAMP domain LOR96_010705 PF10781 Dextransucrase DSRB LOR96_010710 PF00313 'Cold-shock' DNA-binding domain LOR96_010720 PF00356 Bacterial regulatory proteins, lacI family LOR96_010725 PF16353 Domain of unknown function(DUF4981) LOR96_010725 PF00703 Glycosyl hydrolases family 2 LOR96_010725 PF02837 Glycosyl hydrolases family 2, sugar binding domain LOR96_010725 PF02929 Beta galactosidase small chain LOR96_010725 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LOR96_010730 PF08659 KR domain LOR96_010730 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_010730 PF00107 Zinc-binding dehydrogenase LOR96_010730 PF16197 Ketoacyl-synthetase C-terminal extension LOR96_010730 PF00109 Beta-ketoacyl synthase, N-terminal domain LOR96_010730 PF02801 Beta-ketoacyl synthase, C-terminal domain LOR96_010730 PF00550 Phosphopantetheine attachment site LOR96_010730 PF14765 Polyketide synthase dehydratase LOR96_010730 PF00698 Acyl transferase domain LOR96_010735 PF10777 Inner membrane protein YlaC LOR96_010745 PF14001 YdfZ protein LOR96_010755 PF06167 Glucose-regulated metallo-peptidase M90 LOR96_010765 PF13356 Arm DNA-binding domain LOR96_010765 PF00589 Phage integrase family LOR96_010780 PF13693 Winged helix-turn-helix DNA-binding LOR96_010815 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LOR96_010835 PF04335 VirB8 protein LOR96_010840 PF03524 Conjugal transfer protein LOR96_010845 PF03743 Bacterial conjugation TrbI-like protein LOR96_010850 PF00437 Type II/IV secretion system protein LOR96_010865 PF08401 Domain of unknown function (DUF1738) LOR96_010865 PF18818 Metallopeptidase superfamily domain LOR96_010920 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LOR96_010920 PF01648 4'-phosphopantetheinyl transferase superfamily LOR96_010925 PF00939 Sodium:sulfate symporter transmembrane region LOR96_010930 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LOR96_010935 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LOR96_010940 PF04223 Citrate lyase, alpha subunit (CitF) LOR96_010945 PF03328 HpcH/HpaI aldolase/citrate lyase family LOR96_010950 PF06857 Malonate decarboxylase delta subunit (MdcD) LOR96_010955 PF08218 Citrate lyase ligase C-terminal domain LOR96_010960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LOR96_010960 PF17203 Single cache domain 3 LOR96_010960 PF00989 PAS fold LOR96_010960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_010965 PF12431 Transcriptional regulator LOR96_010965 PF00072 Response regulator receiver domain LOR96_010970 PF00196 Bacterial regulatory proteins, luxR family LOR96_010970 PF00072 Response regulator receiver domain LOR96_010975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_010975 PF07730 Histidine kinase LOR96_010975 PF05231 MASE1 LOR96_010980 PF07690 Major Facilitator Superfamily LOR96_010990 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_010995 PF00005 ABC transporter LOR96_010995 PF08402 TOBE domain LOR96_011010 PF04363 Protein of unknown function (DUF496) LOR96_011015 PF04632 Fusaric acid resistance protein family LOR96_011025 PF08411 Exonuclease C-terminal LOR96_011025 PF00929 Exonuclease LOR96_011030 PF13520 Amino acid permease LOR96_011035 PF07715 TonB-dependent Receptor Plug Domain LOR96_011035 PF00593 TonB dependent receptor LOR96_011040 PF00005 ABC transporter LOR96_011045 PF01032 FecCD transport family LOR96_011055 PF00324 Amino acid permease LOR96_011060 PF03466 LysR substrate binding domain LOR96_011060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_011070 PF03601 Conserved hypothetical protein 698 LOR96_011075 PF01261 Xylose isomerase-like TIM barrel LOR96_011080 PF02378 Phosphotransferase system, EIIC LOR96_011080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LOR96_011085 PF00294 pfkB family carbohydrate kinase LOR96_011090 PF00381 PTS HPr component phosphorylation site LOR96_011090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOR96_011095 PF00293 NUDIX domain LOR96_011100 PF03264 NapC/NirT cytochrome c family, N-terminal region LOR96_011105 PF18364 Molybdopterin oxidoreductase N-terminal domain LOR96_011105 PF00384 Molybdopterin oxidoreductase LOR96_011105 PF01568 Molydopterin dinucleotide binding domain LOR96_011110 PF03692 Putative zinc- or iron-chelating domain LOR96_011115 PF03222 Tryptophan/tyrosine permease family LOR96_011125 PF09285 Elongation factor P, C-terminal LOR96_011125 PF01132 Elongation factor P (EF-P) OB domain LOR96_011125 PF08207 Elongation factor P (EF-P) KOW-like domain LOR96_011130 PF03786 D-mannonate dehydratase (UxuA) LOR96_011135 PF08125 Mannitol dehydrogenase C-terminal domain LOR96_011135 PF01232 Mannitol dehydrogenase Rossmann domain LOR96_011145 PF07683 Cobalamin synthesis protein cobW C-terminal domain LOR96_011145 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOR96_011150 PF01569 PAP2 superfamily LOR96_011155 PF00877 NlpC/P60 family LOR96_011160 PF00563 EAL domain LOR96_011160 PF12792 CSS motif domain associated with EAL LOR96_011165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOR96_011170 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_011175 PF12911 N-terminal TM domain of oligopeptide transport permease C LOR96_011175 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_011180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOR96_011180 PF00005 ABC transporter LOR96_011185 PF13989 YejG-like protein LOR96_011190 PF07690 Major Facilitator Superfamily LOR96_011195 PF00849 RNA pseudouridylate synthase LOR96_011195 PF01479 S4 domain LOR96_011200 PF00271 Helicase conserved C-terminal domain LOR96_011200 PF04851 Type III restriction enzyme, res subunit LOR96_011205 PF01386 Ribosomal L25p family LOR96_011210 PF04245 37-kD nucleoid-associated bacterial protein LOR96_011215 PF07208 Protein of unknown function (DUF1414) LOR96_011220 PF11893 Domain of unknown function (DUF3413) LOR96_011220 PF00884 Sulfatase LOR96_011235 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LOR96_011245 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LOR96_011250 PF04865 Baseplate J-like protein LOR96_011295 PF17482 Phage tail sheath C-terminal domain LOR96_011295 PF04984 Phage tail sheath protein subtilisin-like domain LOR96_011345 PF03354 Phage Terminase LOR96_011365 PF03245 Bacteriophage Rz lysis protein LOR96_011370 PF13539 D-alanyl-D-alanine carboxypeptidase LOR96_011400 PF03793 PASTA domain LOR96_011400 PF00069 Protein kinase domain LOR96_011405 PF01555 DNA methylase LOR96_011415 PF06147 Protein of unknown function (DUF968) LOR96_011430 PF05869 DNA N-6-adenine-methyltransferase (Dam) LOR96_011435 PF03354 Phage Terminase LOR96_011470 PF10065 Uncharacterized conserved protein (DUF2303) LOR96_011515 PF06183 DinI-like family LOR96_011520 PF12706 Beta-lactamase superfamily domain LOR96_011525 PF00144 Beta-lactamase LOR96_011530 PF13302 Acetyltransferase (GNAT) domain LOR96_011545 PF00267 Gram-negative porin LOR96_011550 PF07690 Major Facilitator Superfamily LOR96_011555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_011555 PF01627 Hpt domain LOR96_011555 PF16359 RcsD-ABL domain LOR96_011560 PF00196 Bacterial regulatory proteins, luxR family LOR96_011560 PF00072 Response regulator receiver domain LOR96_011565 PF00072 Response regulator receiver domain LOR96_011565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_011565 PF00512 His Kinase A (phospho-acceptor) domain LOR96_011565 PF09456 RcsC Alpha-Beta-Loop (ABL) LOR96_011570 PF03989 DNA gyrase C-terminal domain, beta-propeller LOR96_011570 PF00521 DNA gyrase/topoisomerase IV, subunit A LOR96_011580 PF03477 ATP cone domain LOR96_011580 PF02867 Ribonucleotide reductase, barrel domain LOR96_011580 PF00317 Ribonucleotide reductase, all-alpha domain LOR96_011585 PF00268 Ribonucleotide reductase, small chain LOR96_011590 PF00111 2Fe-2S iron-sulfur cluster binding domain LOR96_011600 PF03974 Ecotin LOR96_011605 PF00994 Probable molybdopterin binding domain LOR96_011610 PF04138 GtrA-like protein LOR96_011615 PF00535 Glycosyl transferase family 2 LOR96_011625 PF03222 Tryptophan/tyrosine permease family LOR96_011630 PF07437 YfaZ precursor LOR96_011635 PF00199 Catalase LOR96_011635 PF06628 Catalase-related immune-responsive LOR96_011640 PF00501 AMP-binding enzyme LOR96_011640 PF13193 AMP-binding enzyme C-terminal domain LOR96_011645 PF13378 Enolase C-terminal domain-like LOR96_011650 PF00378 Enoyl-CoA hydratase/isomerase LOR96_011655 PF12697 Alpha/beta hydrolase family LOR96_011660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOR96_011660 PF16582 Middle domain of thiamine pyrophosphate LOR96_011660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOR96_011665 PF00425 chorismate binding enzyme LOR96_011670 PF05957 Bacterial protein of unknown function (DUF883) LOR96_011675 PF06496 Protein of unknown function (DUF1097) LOR96_011680 PF00361 Proton-conducting membrane transporter LOR96_011685 PF00361 Proton-conducting membrane transporter LOR96_011690 PF00361 Proton-conducting membrane transporter LOR96_011690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LOR96_011695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LOR96_011700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LOR96_011705 PF12838 4Fe-4S dicluster domain LOR96_011710 PF00146 NADH dehydrogenase LOR96_011715 PF00384 Molybdopterin oxidoreductase LOR96_011715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOR96_011715 PF01568 Molydopterin dinucleotide binding domain LOR96_011715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LOR96_011720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LOR96_011720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LOR96_011720 PF10531 SLBB domain LOR96_011730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LOR96_011730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LOR96_011735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LOR96_011740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LOR96_011745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_011745 PF03466 LysR substrate binding domain LOR96_011750 PF00155 Aminotransferase class I and II LOR96_011760 PF03600 Citrate transporter LOR96_011760 PF02080 TrkA-C domain LOR96_011770 PF03887 YfbU domain LOR96_011775 PF04217 Protein of unknown function, DUF412 LOR96_011780 PF00871 Acetokinase family LOR96_011785 PF07085 DRTGG domain LOR96_011785 PF01515 Phosphate acetyl/butaryl transferase LOR96_011790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LOR96_011790 PF00356 Bacterial regulatory proteins, lacI family LOR96_011795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOR96_011805 PF03611 PTS system sugar-specific permease component LOR96_011810 PF00293 NUDIX domain LOR96_011815 PF12850 Calcineurin-like phosphoesterase superfamily domain LOR96_011830 PF00043 Glutathione S-transferase, C-terminal domain LOR96_011830 PF02798 Glutathione S-transferase, N-terminal domain LOR96_011835 PF01370 NAD dependent epimerase/dehydratase family LOR96_011835 PF08338 Domain of unknown function (DUF1731) LOR96_011840 PF00005 ABC transporter LOR96_011845 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_011850 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_011855 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_011865 PF02441 Flavoprotein LOR96_011870 PF00156 Phosphoribosyl transferase domain LOR96_011875 PF02674 Colicin V production protein LOR96_011880 PF05036 Sporulation related domain LOR96_011885 PF02875 Mur ligase family, glutamate ligase domain LOR96_011885 PF08245 Mur ligase middle domain LOR96_011890 PF17848 Acetyl-coA carboxylase zinc finger domain LOR96_011890 PF01039 Carboxyl transferase domain LOR96_011895 PF09335 SNARE associated Golgi protein LOR96_011900 PF01416 tRNA pseudouridine synthase LOR96_011905 PF01118 Semialdehyde dehydrogenase, NAD binding domain LOR96_011905 PF02774 Semialdehyde dehydrogenase, dimerisation domain LOR96_011910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOR96_011910 PF11890 Domain of unknown function (DUF3410) LOR96_011910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOR96_011930 PF00155 Aminotransferase class I and II LOR96_011935 PF00578 AhpC/TSA family LOR96_011965 PF00109 Beta-ketoacyl synthase, N-terminal domain LOR96_011965 PF02801 Beta-ketoacyl synthase, C-terminal domain LOR96_011970 PF01266 FAD dependent oxidoreductase LOR96_011970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LOR96_011975 PF08891 YfcL protein LOR96_011980 PF04315 Elongation factor P hydroxylase LOR96_011985 PF01925 Sulfite exporter TauE/SafE LOR96_011990 PF03411 Penicillin-insensitive murein endopeptidase LOR96_011995 PF01264 Chorismate synthase LOR96_012000 PF05175 Methyltransferase small domain LOR96_012005 PF01713 Smr domain LOR96_012010 PF00300 Histidine phosphatase superfamily (branch 1) LOR96_012015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOR96_012015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOR96_012015 PF00378 Enoyl-CoA hydratase/isomerase LOR96_012020 PF00108 Thiolase, N-terminal domain LOR96_012020 PF02803 Thiolase, C-terminal domain LOR96_012025 PF04175 Protein of unknown function (DUF406) LOR96_012030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LOR96_012035 PF04333 MlaA lipoprotein LOR96_012040 PF03918 Cytochrome C biogenesis protein LOR96_012045 PF03918 Cytochrome C biogenesis protein LOR96_012050 PF08534 Redoxin LOR96_012055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LOR96_012055 PF01578 Cytochrome C assembly protein LOR96_012060 PF03100 CcmE LOR96_012065 PF04995 Heme exporter protein D (CcmD) LOR96_012070 PF01578 Cytochrome C assembly protein LOR96_012075 PF03379 CcmB protein LOR96_012080 PF00005 ABC transporter LOR96_012090 PF00589 Phage integrase family LOR96_012090 PF14659 Phage integrase, N-terminal SAM-like domain LOR96_012090 PF13356 Arm DNA-binding domain LOR96_012095 PF01119 DNA mismatch repair protein, C-terminal domain LOR96_012095 PF08676 MutL C terminal dimerisation domain LOR96_012150 PF03831 PhnA domain LOR96_012150 PF08274 PhnA Zinc-Ribbon LOR96_012155 PF13406 Transglycosylase SLT domain LOR96_012170 PF01292 Prokaryotic cytochrome b561 LOR96_012175 PF00155 Aminotransferase class I and II LOR96_012180 PF07350 Protein of unknown function (DUF1479) LOR96_012185 PF07694 5TMR of 5TMR-LYT LOR96_012185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_012185 PF06580 Histidine kinase LOR96_012190 PF04397 LytTr DNA-binding domain LOR96_012190 PF00072 Response regulator receiver domain LOR96_012195 PF07690 Major Facilitator Superfamily LOR96_012200 PF02685 Glucokinase LOR96_012210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_012210 PF03466 LysR substrate binding domain LOR96_012220 PF01566 Natural resistance-associated macrophage protein LOR96_012225 PF07670 Nucleoside recognition LOR96_012225 PF07662 Na+ dependent nucleoside transporter C-terminus LOR96_012225 PF01773 Na+ dependent nucleoside transporter N-terminus LOR96_012270 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOR96_012300 PF12843 Putative quorum-sensing-regulated virulence factor LOR96_012305 PF00533 BRCA1 C Terminus (BRCT) domain LOR96_012305 PF01653 NAD-dependent DNA ligase adenylation domain LOR96_012305 PF03120 NAD-dependent DNA ligase OB-fold domain LOR96_012305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LOR96_012305 PF12826 Helix-hairpin-helix motif LOR96_012310 PF04354 ZipA, C-terminal FtsZ-binding domain LOR96_012320 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_012325 PF00381 PTS HPr component phosphorylation site LOR96_012330 PF05524 PEP-utilising enzyme, N-terminal LOR96_012330 PF00391 PEP-utilising enzyme, mobile domain LOR96_012330 PF02896 PEP-utilising enzyme, TIM barrel domain LOR96_012335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LOR96_012340 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_012345 PF00005 ABC transporter LOR96_012350 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_012355 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_012365 PF07690 Major Facilitator Superfamily LOR96_012370 PF01418 Helix-turn-helix domain, rpiR family LOR96_012370 PF01380 SIS domain LOR96_012375 PF04074 YhcH/YjgK/YiaL LOR96_012380 PF00480 ROK family LOR96_012385 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LOR96_012390 PF00701 Dihydrodipicolinate synthetase family LOR96_012395 PF04261 Dyp-type peroxidase family LOR96_012400 PF06572 Protein of unknown function (DUF1131) LOR96_012405 PF04076 Bacterial OB fold (BOF) protein LOR96_012455 PF00583 Acetyltransferase (GNAT) family LOR96_012460 PF01218 Coproporphyrinogen III oxidase LOR96_012465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LOR96_012470 PF00390 Malic enzyme, N-terminal domain LOR96_012470 PF01515 Phosphate acetyl/butaryl transferase LOR96_012470 PF03949 Malic enzyme, NAD binding domain LOR96_012475 PF00293 NUDIX domain LOR96_012480 PF03264 NapC/NirT cytochrome c family, N-terminal region LOR96_012485 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LOR96_012490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOR96_012490 PF00384 Molybdopterin oxidoreductase LOR96_012490 PF01568 Molydopterin dinucleotide binding domain LOR96_012490 PF10518 TAT (twin-arginine translocation) pathway signal sequence LOR96_012495 PF03927 NapD protein LOR96_012500 PF13187 4Fe-4S dicluster domain LOR96_012500 PF00037 4Fe-4S binding domain LOR96_012500 PF12800 4Fe-4S binding domain LOR96_012505 PF00196 Bacterial regulatory proteins, luxR family LOR96_012505 PF00072 Response regulator receiver domain LOR96_012515 PF00873 AcrB/AcrD/AcrF family LOR96_012525 PF01817 Chorismate mutase type II LOR96_012530 PF03960 ArsC family LOR96_012535 PF07687 Peptidase dimerisation domain LOR96_012535 PF01546 Peptidase family M20/M25/M40 LOR96_012540 PF02557 D-alanyl-D-alanine carboxypeptidase LOR96_012545 PF13980 Uncharacterised protein family (UPF0370) LOR96_012550 PF02230 Phospholipase/Carboxylesterase LOR96_012555 PF17176 tRNA-binding domain LOR96_012555 PF05127 Helicase LOR96_012555 PF13718 GNAT acetyltransferase 2 LOR96_012555 PF08351 Domain of unknown function (DUF1726) LOR96_012560 PF04284 Protein of unknown function (DUF441) LOR96_012565 PF01259 SAICAR synthetase LOR96_012570 PF06804 NlpB/DapX lipoprotein LOR96_012575 PF00701 Dihydrodipicolinate synthetase family LOR96_012580 PF01842 ACT domain LOR96_012585 PF00578 AhpC/TSA family LOR96_012590 PF01594 AI-2E family transporter LOR96_012595 PF07720 Tetratricopeptide repeat LOR96_012595 PF01435 Peptidase family M48 LOR96_012600 PF03960 ArsC family LOR96_012605 PF00308 Bacterial dnaA protein LOR96_012610 PF00860 Permease family LOR96_012620 PF02769 AIR synthase related protein, C-terminal domain LOR96_012620 PF00586 AIR synthase related protein, N-terminal domain LOR96_012625 PF00551 Formyl transferase LOR96_012630 PF13302 Acetyltransferase (GNAT) domain LOR96_012635 PF00005 ABC transporter LOR96_012640 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_012645 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_012650 PF13090 Polyphosphate kinase C-terminal domain 2 LOR96_012650 PF02503 Polyphosphate kinase middle domain LOR96_012650 PF17941 Polyphosphate kinase C-terminal domain 1 LOR96_012650 PF13089 Polyphosphate kinase N-terminal domain LOR96_012655 PF02541 Ppx/GppA phosphatase family LOR96_012665 PF00571 CBS domain LOR96_012665 PF01769 Divalent cation transporter LOR96_012665 PF03448 MgtE intracellular N domain LOR96_012670 PF00012 Hsp70 protein LOR96_012680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_012680 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_012685 PF13954 PapC N-terminal domain LOR96_012685 PF13953 PapC C-terminal domain LOR96_012685 PF00577 Outer membrane usher protein LOR96_012700 PF13533 Biotin-lipoyl like LOR96_012705 PF00873 AcrB/AcrD/AcrF family LOR96_012710 PF00873 AcrB/AcrD/AcrF family LOR96_012715 PF07690 Major Facilitator Superfamily LOR96_012720 PF00512 His Kinase A (phospho-acceptor) domain LOR96_012720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_012720 PF00672 HAMP domain LOR96_012725 PF00072 Response regulator receiver domain LOR96_012725 PF00486 Transcriptional regulatory protein, C terminal LOR96_012730 PF07411 Domain of unknown function (DUF1508) LOR96_012735 PF16325 Peptidase family U32 C-terminal domain LOR96_012735 PF01136 Peptidase family U32 LOR96_012740 PF00781 Diacylglycerol kinase catalytic domain LOR96_012755 PF08543 Phosphomethylpyrimidine kinase LOR96_012770 PF00117 Glutamine amidotransferase class-I LOR96_012770 PF00958 GMP synthase C terminal domain LOR96_012770 PF02540 NAD synthase LOR96_012775 PF00571 CBS domain LOR96_012775 PF00478 IMP dehydrogenase / GMP reductase domain LOR96_012780 PF02601 Exonuclease VII, large subunit LOR96_012780 PF13742 OB-fold nucleic acid binding domain LOR96_012785 PF07191 zinc-ribbons LOR96_012790 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LOR96_012790 PF01926 50S ribosome-binding GTPase LOR96_012795 PF13360 PQQ-like domain LOR96_012800 PF09976 Tetratricopeptide repeat-like domain LOR96_012805 PF03129 Anticodon binding domain LOR96_012805 PF13393 Histidyl-tRNA synthetase LOR96_012810 PF04551 GcpE protein LOR96_012815 PF13464 Domain of unknown function (DUF4115) LOR96_012825 PF04055 Radical SAM superfamily LOR96_012830 PF00334 Nucleoside diphosphate kinase LOR96_012840 PF06832 Penicillin-Binding Protein C-terminus Family LOR96_012840 PF00912 Transglycosylase LOR96_012840 PF00905 Penicillin binding protein transpeptidase domain LOR96_012845 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LOR96_012845 PF07703 Alpha-2-macroglobulin bait region domain LOR96_012845 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LOR96_012845 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LOR96_012845 PF00207 Alpha-2-macroglobulin family LOR96_012845 PF01835 MG2 domain LOR96_012845 PF17962 Bacterial macroglobulin domain 6 LOR96_012845 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LOR96_012845 PF07678 A-macroglobulin TED domain LOR96_012850 PF07179 SseB protein N-terminal domain LOR96_012850 PF14581 SseB protein C-terminal domain LOR96_012855 PF12404 Peptidase LOR96_012855 PF00883 Cytosol aminopeptidase family, catalytic domain LOR96_012860 PF04384 Iron-sulphur cluster assembly LOR96_012865 PF00111 2Fe-2S iron-sulfur cluster binding domain LOR96_012870 PF00012 Hsp70 protein LOR96_012875 PF00226 DnaJ domain LOR96_012875 PF07743 HSCB C-terminal oligomerisation domain LOR96_012880 PF01521 Iron-sulphur cluster biosynthesis LOR96_012885 PF01592 NifU-like N terminal domain LOR96_012890 PF00266 Aminotransferase class-V LOR96_012895 PF02082 Transcriptional regulator LOR96_012900 PF00588 SpoU rRNA Methylase family LOR96_012905 PF00459 Inositol monophosphatase family LOR96_012910 PF03824 High-affinity nickel-transport protein LOR96_012915 PF06226 Protein of unknown function (DUF1007) LOR96_012920 PF00874 PRD domain LOR96_012925 PF12832 MFS_1 like family LOR96_012930 PF00464 Serine hydroxymethyltransferase LOR96_012935 PF00175 Oxidoreductase NAD-binding domain LOR96_012935 PF00042 Globin LOR96_012935 PF00970 Oxidoreductase FAD-binding domain LOR96_012940 PF14503 YhfZ C-terminal domain LOR96_012940 PF14502 Helix-turn-helix domain LOR96_012950 PF01168 Alanine racemase, N-terminal domain LOR96_012955 PF02126 Phosphotriesterase family LOR96_012960 PF10941 Protein of unknown function DUF2620 LOR96_012965 PF10797 Protein of unknown function LOR96_012970 PF00543 Nitrogen regulatory protein P-II LOR96_012975 PF00795 Carbon-nitrogen hydrolase LOR96_012975 PF02540 NAD synthase LOR96_012980 PF00072 Response regulator receiver domain LOR96_012980 PF00158 Sigma-54 interaction domain LOR96_012985 PF13942 YfhG lipoprotein LOR96_012990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_012990 PF00512 His Kinase A (phospho-acceptor) domain LOR96_013000 PF02769 AIR synthase related protein, C-terminal domain LOR96_013000 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LOR96_013000 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LOR96_013005 PF01464 Transglycosylase SLT domain LOR96_013005 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_013010 PF14437 MafB19-like deaminase LOR96_013020 PF00367 phosphotransferase system, EIIB LOR96_013020 PF02378 Phosphotransferase system, EIIC LOR96_013025 PF01380 SIS domain LOR96_013030 PF01418 Helix-turn-helix domain, rpiR family LOR96_013030 PF01380 SIS domain LOR96_013035 PF12838 4Fe-4S dicluster domain LOR96_013040 PF01648 4'-phosphopantetheinyl transferase superfamily LOR96_013045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LOR96_013050 PF02565 Recombination protein O C terminal LOR96_013050 PF11967 Recombination protein O N terminal LOR96_013055 PF01926 50S ribosome-binding GTPase LOR96_013055 PF07650 KH domain LOR96_013060 PF00035 Double-stranded RNA binding motif LOR96_013060 PF14622 Ribonuclease-III-like LOR96_013065 PF10502 Signal peptidase, peptidase S26 LOR96_013070 PF00679 Elongation factor G C-terminus LOR96_013070 PF00009 Elongation factor Tu GTP binding domain LOR96_013070 PF03144 Elongation factor Tu domain 2 LOR96_013070 PF06421 GTP-binding protein LepA C-terminus LOR96_013080 PF03888 MucB/RseB N-terminal domain LOR96_013080 PF17188 MucB/RseB C-terminal domain LOR96_013085 PF03873 Anti sigma-E protein RseA, C-terminal domain LOR96_013085 PF03872 Anti sigma-E protein RseA, N-terminal domain LOR96_013090 PF04542 Sigma-70 region 2 LOR96_013090 PF08281 Sigma-70, region 4 LOR96_013095 PF00890 FAD binding domain LOR96_013095 PF02910 Fumarate reductase flavoprotein C-term LOR96_013100 PF05175 Methyltransferase small domain LOR96_013105 PF00270 DEAD/DEAH box helicase LOR96_013105 PF00271 Helicase conserved C-terminal domain LOR96_013110 PF12796 Ankyrin repeats (3 copies) LOR96_013120 PF01228 Glycine radical LOR96_013125 PF03167 Uracil DNA glycosylase superfamily LOR96_013130 PF01025 GrpE LOR96_013135 PF01513 ATP-NAD kinase LOR96_013140 PF02463 RecF/RecN/SMC N terminal domain LOR96_013145 PF04355 SmpA / OmlA family LOR96_013150 PF03658 RnfH family Ubiquitin LOR96_013155 PF03364 Polyketide cyclase / dehydrase and lipid transport LOR96_013160 PF01668 SmpB protein LOR96_013170 PF13356 Arm DNA-binding domain LOR96_013170 PF00589 Phage integrase family LOR96_013200 PF01926 50S ribosome-binding GTPase LOR96_013205 PF08220 DeoR-like helix-turn-helix domain LOR96_013205 PF13280 WYL domain LOR96_013230 PF06067 Domain of unknown function (DUF932) LOR96_013235 PF03230 Antirestriction protein LOR96_013240 PF04002 RadC-like JAB domain LOR96_013245 PF06174 Protein of unknown function (DUF987) LOR96_013250 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LOR96_013255 PF06755 CbtA_toxin of type IV toxin-antitoxin system LOR96_013295 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_013295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_013300 PF13953 PapC C-terminal domain LOR96_013300 PF13954 PapC N-terminal domain LOR96_013300 PF00577 Outer membrane usher protein LOR96_013325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_013325 PF03466 LysR substrate binding domain LOR96_013340 PF01527 Transposase LOR96_013350 PF18413 Neuraminidase-like domain LOR96_013350 PF18413 Neuraminidase-like domain LOR96_013350 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LOR96_013350 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LOR96_013360 PF12255 Insecticide toxin TcdB middle/C-terminal region LOR96_013360 PF12256 Insecticide toxin TcdB middle/N-terminal region LOR96_013360 PF03534 Salmonella virulence plasmid 65kDa B protein LOR96_013365 PF18807 Tripartite Tc toxins repeat LOR96_013365 PF14431 YwqJ-like deaminase LOR96_013395 PF00571 CBS domain LOR96_013395 PF01380 SIS domain LOR96_013400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LOR96_013400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LOR96_013410 PF02653 Branched-chain amino acid transport system / permease component LOR96_013415 PF00005 ABC transporter LOR96_013425 PF00561 alpha/beta hydrolase fold LOR96_013430 PF03466 LysR substrate binding domain LOR96_013430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_013435 PF02652 L-lactate permease LOR96_013440 PF01070 FMN-dependent dehydrogenase LOR96_013445 PF06039 Malate:quinone oxidoreductase (Mqo) LOR96_013450 PF00313 'Cold-shock' DNA-binding domain LOR96_013460 PF06711 Protein of unknown function (DUF1198) LOR96_013465 PF09400 Protein of unknown function (DUF2002) LOR96_013480 PF07972 NrdI Flavodoxin like LOR96_013485 PF02867 Ribonucleotide reductase, barrel domain LOR96_013485 PF00317 Ribonucleotide reductase, all-alpha domain LOR96_013485 PF08343 Ribonucleotide reductase N-terminal LOR96_013490 PF00268 Ribonucleotide reductase, small chain LOR96_013495 PF00005 ABC transporter LOR96_013495 PF00571 CBS domain LOR96_013500 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_013505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LOR96_013515 PF07690 Major Facilitator Superfamily LOR96_013520 PF01047 MarR family LOR96_013530 PF00529 HlyD membrane-fusion protein of T1SS LOR96_013530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOR96_013535 PF07690 Major Facilitator Superfamily LOR96_013540 PF00588 SpoU rRNA Methylase family LOR96_013540 PF08032 RNA 2'-O ribose methyltransferase substrate binding LOR96_013545 PF00085 Thioredoxin LOR96_013550 PF03942 DTW domain LOR96_013555 PF00583 Acetyltransferase (GNAT) family LOR96_013555 PF13380 CoA binding domain LOR96_013555 PF13607 Succinyl-CoA ligase like flavodoxin domain LOR96_013560 PF13091 PLD-like domain LOR96_013565 PF10043 Predicted periplasmic lipoprotein (DUF2279) LOR96_013595 PF00005 ABC transporter LOR96_013595 PF09383 NIL domain LOR96_013600 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_013605 PF03180 NLPA lipoprotein LOR96_013610 PF16358 RcsF lipoprotein LOR96_013615 PF18389 TrmO C-terminal domain LOR96_013615 PF01980 tRNA-methyltransferase O LOR96_013620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOR96_013620 PF04073 Aminoacyl-tRNA editing domain LOR96_013620 PF03129 Anticodon binding domain LOR96_013625 PF04170 NlpE N-terminal domain LOR96_013625 PF17185 NlpE C-terminal OB domain LOR96_013630 PF00472 RF-1 domain LOR96_013635 PF07152 YaeQ protein LOR96_013640 PF06786 Uncharacterised protein family (UPF0253) LOR96_013645 PF07073 Modulator of Rho-dependent transcription termination (ROF) LOR96_013650 PF00034 Cytochrome c LOR96_013655 PF01171 PP-loop family LOR96_013655 PF09179 TilS substrate binding domain LOR96_013655 PF11734 TilS substrate C-terminal domain LOR96_013660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOR96_013675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LOR96_013680 PF02811 PHP domain LOR96_013680 PF01336 OB-fold nucleic acid binding domain LOR96_013680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LOR96_013680 PF14579 Helix-hairpin-helix motif LOR96_013680 PF07733 Bacterial DNA polymerase III alpha NTPase domain LOR96_013685 PF01351 Ribonuclease HII LOR96_013690 PF02684 Lipid-A-disaccharide synthetase LOR96_013695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LOR96_013695 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_013700 PF07977 FabA-like domain LOR96_013705 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_013705 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LOR96_013710 PF03938 Outer membrane protein (OmpH-like) LOR96_013715 PF01103 Surface antigen LOR96_013715 PF07244 Surface antigen variable number repeat LOR96_013720 PF17820 PDZ domain LOR96_013720 PF02163 Peptidase family M50 LOR96_013730 PF01255 Putative undecaprenyl diphosphate synthase LOR96_013735 PF13288 DXP reductoisomerase C-terminal domain LOR96_013735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LOR96_013735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LOR96_013740 PF01765 Ribosome recycling factor LOR96_013745 PF00696 Amino acid kinase family LOR96_013750 PF00889 Elongation factor TS LOR96_013755 PF00318 Ribosomal protein S2 LOR96_013760 PF00557 Metallopeptidase family M24 LOR96_013765 PF01842 ACT domain LOR96_013765 PF08335 GlnD PII-uridylyltransferase LOR96_013765 PF01909 Nucleotidyltransferase domain LOR96_013765 PF01966 HD domain LOR96_013770 PF14602 Hexapeptide repeat of succinyl-transferase LOR96_013770 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LOR96_013770 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_013775 PF11944 Protein of unknown function (DUF3461) LOR96_013780 PF00258 Flavodoxin LOR96_013785 PF00849 RNA pseudouridylate synthase LOR96_013790 PF04287 tRNA pseudouridine synthase C LOR96_013795 PF07348 Syd protein (SUKH-2) LOR96_013800 PF14489 QueF-like protein LOR96_013800 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LOR96_013805 PF03641 Possible lysine decarboxylase LOR96_013805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LOR96_013805 PF11892 Domain of unknown function (DUF3412) LOR96_013810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LOR96_013810 PF01367 5'-3' exonuclease, C-terminal SAM fold LOR96_013815 PF18125 RlmM ferredoxin-like domain LOR96_013815 PF01728 FtsJ-like methyltransferase LOR96_013820 PF04241 Protein of unknown function (DUF423) LOR96_013825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_013825 PF03466 LysR substrate binding domain LOR96_013830 PF06004 Bacterial protein of unknown function (DUF903) LOR96_013835 PF00266 Aminotransferase class-V LOR96_013840 PF02657 Fe-S metabolism associated domain LOR96_013845 PF00899 ThiF family LOR96_013850 PF06725 3D domain LOR96_013850 PF03562 MltA specific insert domain LOR96_013870 PF11741 AMIN domain LOR96_013870 PF01520 N-acetylmuramoyl-L-alanine amidase LOR96_013875 PF00696 Amino acid kinase family LOR96_013875 PF00583 Acetyltransferase (GNAT) family LOR96_013880 PF13538 UvrD-like helicase C-terminal domain LOR96_013885 PF13361 UvrD-like helicase C-terminal domain LOR96_013885 PF12705 PD-(D/E)XK nuclease superfamily LOR96_013885 PF00580 UvrD/REP helicase N-terminal domain LOR96_013890 PF16187 Middle or third domain of peptidase_M16 LOR96_013890 PF00675 Insulinase (Peptidase family M16) LOR96_013890 PF05193 Peptidase M16 inactive domain LOR96_013895 PF17946 RecC C-terminal domain LOR96_013900 PF07963 Prokaryotic N-terminal methylation motif LOR96_013900 PF12528 Type II secretion prepilin peptidase dependent protein C LOR96_013915 PF07963 Prokaryotic N-terminal methylation motif LOR96_013915 PF00114 Pilin (bacterial filament) LOR96_013920 PF00303 Thymidylate synthase LOR96_013925 PF01790 Prolipoprotein diacylglyceryl transferase LOR96_013930 PF05524 PEP-utilising enzyme, N-terminal LOR96_013930 PF01590 GAF domain LOR96_013930 PF00391 PEP-utilising enzyme, mobile domain LOR96_013930 PF02896 PEP-utilising enzyme, TIM barrel domain LOR96_013935 PF00293 NUDIX domain LOR96_013940 PF02976 DNA mismatch repair enzyme MutH LOR96_013945 PF03741 Integral membrane protein TerC family LOR96_013950 PF00248 Aldo/keto reductase family LOR96_013955 PF07690 Major Facilitator Superfamily LOR96_013960 PF00501 AMP-binding enzyme LOR96_013960 PF13193 AMP-binding enzyme C-terminal domain LOR96_013960 PF01553 Acyltransferase LOR96_013965 PF00356 Bacterial regulatory proteins, lacI family LOR96_013970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LOR96_013970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LOR96_013975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_013975 PF03466 LysR substrate binding domain LOR96_013980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_013980 PF03466 LysR substrate binding domain LOR96_014020 PF07963 Prokaryotic N-terminal methylation motif LOR96_014020 PF11612 Type II secretion system (T2SS), protein J LOR96_014025 PF07963 Prokaryotic N-terminal methylation motif LOR96_014025 PF02501 Type II secretion system (T2SS), protein I LOR96_014035 PF08334 Type II secretion system (T2SS), protein G LOR96_014035 PF07963 Prokaryotic N-terminal methylation motif LOR96_014040 PF00482 Type II secretion system (T2SS), protein F LOR96_014045 PF00437 Type II/IV secretion system protein LOR96_014050 PF03958 Bacterial type II/III secretion system short domain LOR96_014050 PF00263 Bacterial type II and III secretion system protein LOR96_014075 PF00005 ABC transporter LOR96_014080 PF02405 Permease MlaE LOR96_014090 PF00152 tRNA synthetases class II (D, K and N) LOR96_014090 PF01336 OB-fold nucleic acid binding domain LOR96_014100 PF17768 RecJ OB domain LOR96_014100 PF01368 DHH family LOR96_014100 PF02272 DHHA1 domain LOR96_014105 PF10411 Disulfide bond isomerase protein N-terminus LOR96_014105 PF13098 Thioredoxin-like domain LOR96_014110 PF00589 Phage integrase family LOR96_014110 PF02899 Phage integrase, N-terminal SAM-like domain LOR96_014115 PF00258 Flavodoxin LOR96_014120 PF07254 Membrane-bound toxin component of toxin-antitoxin system LOR96_014125 PF03937 Flavinator of succinate dehydrogenase LOR96_014130 PF01571 Aminomethyltransferase folate-binding domain LOR96_014135 PF03006 Haemolysin-III related LOR96_014145 PF02347 Glycine cleavage system P-protein LOR96_014150 PF01597 Glycine cleavage H-protein LOR96_014155 PF08669 Glycine cleavage T-protein C-terminal barrel domain LOR96_014155 PF01571 Aminomethyltransferase folate-binding domain LOR96_014160 PF01494 FAD binding domain LOR96_014165 PF01494 FAD binding domain LOR96_014170 PF05195 Aminopeptidase P, N-terminal domain LOR96_014170 PF00557 Metallopeptidase family M24 LOR96_014175 PF03695 Uncharacterised protein family (UPF0149) LOR96_014180 PF05164 Cell division protein ZapA LOR96_014190 PF01812 5-formyltetrahydrofolate cyclo-ligase family LOR96_014195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOR96_014195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOR96_014195 PF01842 ACT domain LOR96_014200 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LOR96_014205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_014205 PF03466 LysR substrate binding domain LOR96_014210 PF04402 Protein of unknown function (DUF541) LOR96_014215 PF01810 LysE type translocator LOR96_014220 PF05552 Conserved TM helix LOR96_014220 PF00924 Mechanosensitive ion channel LOR96_014225 PF01116 Fructose-bisphosphate aldolase class-II LOR96_014230 PF00162 Phosphoglycerate kinase LOR96_014235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOR96_014235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOR96_014240 PF02779 Transketolase, pyrimidine binding domain LOR96_014240 PF02780 Transketolase, C-terminal domain LOR96_014240 PF00456 Transketolase, thiamine diphosphate binding domain LOR96_014250 PF17944 Arginine decarboxylase C-terminal helical extension LOR96_014250 PF17810 Arginine decarboxylase helical bundle domain LOR96_014250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LOR96_014255 PF02773 S-adenosylmethionine synthetase, C-terminal domain LOR96_014255 PF02772 S-adenosylmethionine synthetase, central domain LOR96_014255 PF00438 S-adenosylmethionine synthetase, N-terminal domain LOR96_014265 PF04143 Sulphur transport LOR96_014275 PF10263 SprT-like family LOR96_014275 PF17283 SprT-like zinc ribbon domain LOR96_014280 PF04231 Endonuclease I LOR96_014285 PF04452 RNA methyltransferase LOR96_014290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LOR96_014290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LOR96_014295 PF02622 Uncharacterized ACR, COG1678 LOR96_014300 PF03652 Holliday junction resolvase LOR96_014305 PF00795 Carbon-nitrogen hydrolase LOR96_014310 PF04371 Porphyromonas-type peptidyl-arginine deiminase LOR96_014315 PF00437 Type II/IV secretion system protein LOR96_014320 PF01168 Alanine racemase, N-terminal domain LOR96_014325 PF14748 Pyrroline-5-carboxylate reductase dimerisation LOR96_014325 PF03807 NADP oxidoreductase coenzyme F420-dependent LOR96_014330 PF02325 YGGT family LOR96_014335 PF02594 Uncharacterised ACR, YggU family COG1872 LOR96_014340 PF01725 Ham1 family LOR96_014345 PF04055 Radical SAM superfamily LOR96_014345 PF06969 HemN C-terminal domain LOR96_014350 PF11101 Protein of unknown function (DUF2884) LOR96_014355 PF04960 Glutaminase LOR96_014360 PF04320 Protein with unknown function (DUF469) LOR96_014365 PF02390 Putative methyltransferase LOR96_014370 PF10576 Iron-sulfur binding domain of endonuclease III LOR96_014370 PF00633 Helix-hairpin-helix motif LOR96_014370 PF00730 HhH-GPD superfamily base excision DNA repair protein LOR96_014370 PF14815 NUDIX domain LOR96_014375 PF04362 Bacterial Fe(2+) trafficking LOR96_014380 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LOR96_014380 PF01464 Transglycosylase SLT domain LOR96_014425 PF00294 pfkB family carbohydrate kinase LOR96_014430 PF01228 Glycine radical LOR96_014430 PF02901 Pyruvate formate lyase-like LOR96_014435 PF00871 Acetokinase family LOR96_014440 PF01490 Transmembrane amino acid transporter protein LOR96_014445 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_014450 PF00501 AMP-binding enzyme LOR96_014450 PF13193 AMP-binding enzyme C-terminal domain LOR96_014450 PF00668 Condensation domain LOR96_014450 PF00550 Phosphopantetheine attachment site LOR96_014450 PF00975 Thioesterase domain LOR96_014460 PF00857 Isochorismatase family LOR96_014460 PF00550 Phosphopantetheine attachment site LOR96_014465 PF00501 AMP-binding enzyme LOR96_014465 PF13193 AMP-binding enzyme C-terminal domain LOR96_014470 PF00425 chorismate binding enzyme LOR96_014475 PF01497 Periplasmic binding protein LOR96_014480 PF05977 Transmembrane secretion effector LOR96_014485 PF01032 FecCD transport family LOR96_014490 PF01032 FecCD transport family LOR96_014495 PF00005 ABC transporter LOR96_014505 PF13193 AMP-binding enzyme C-terminal domain LOR96_014505 PF00668 Condensation domain LOR96_014505 PF00550 Phosphopantetheine attachment site LOR96_014505 PF00975 Thioesterase domain LOR96_014505 PF00501 AMP-binding enzyme LOR96_014510 PF03621 MbtH-like protein LOR96_014515 PF11806 Domain of unknown function (DUF3327) LOR96_014515 PF00756 Putative esterase LOR96_014520 PF07715 TonB-dependent Receptor Plug Domain LOR96_014520 PF00593 TonB dependent receptor LOR96_014525 PF08501 Shikimate dehydrogenase substrate binding domain LOR96_014550 PF04972 BON domain LOR96_014550 PF00263 Bacterial type II and III secretion system protein LOR96_014550 PF13629 Pilus formation protein N terminal region LOR96_014570 PF00437 Type II/IV secretion system protein LOR96_014610 PF02472 Biopolymer transport protein ExbD/TolR LOR96_014615 PF01618 MotA/TolQ/ExbB proton channel family LOR96_014620 PF01053 Cys/Met metabolism PLP-dependent enzyme LOR96_014625 PF09335 SNARE associated Golgi protein LOR96_014630 PF06719 AraC-type transcriptional regulator N-terminus LOR96_014630 PF12833 Helix-turn-helix domain LOR96_014635 PF00465 Iron-containing alcohol dehydrogenase LOR96_014640 PF00248 Aldo/keto reductase family LOR96_014645 PF11842 Domain of unknown function (DUF3362) LOR96_014645 PF04055 Radical SAM superfamily LOR96_014645 PF08497 Radical SAM N-terminal LOR96_014650 PF07731 Multicopper oxidase LOR96_014650 PF07732 Multicopper oxidase LOR96_014655 PF01553 Acyltransferase LOR96_014660 PF03989 DNA gyrase C-terminal domain, beta-propeller LOR96_014660 PF00521 DNA gyrase/topoisomerase IV, subunit A LOR96_014665 PF02525 Flavodoxin-like fold LOR96_014670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_014670 PF03466 LysR substrate binding domain LOR96_014675 PF00204 DNA gyrase B LOR96_014675 PF00986 DNA gyrase B subunit, carboxyl terminus LOR96_014675 PF01751 Toprim domain LOR96_014675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_014680 PF05728 Uncharacterised protein family (UPF0227) LOR96_014685 PF00149 Calcineurin-like phosphoesterase LOR96_014690 PF06853 Protein of unknown function (DUF1249) LOR96_014695 PF00293 NUDIX domain LOR96_014700 PF02321 Outer membrane efflux protein LOR96_014705 PF06693 Protein of unknown function (DUF1190) LOR96_014710 PF03738 Glutathionylspermidine synthase preATP-grasp LOR96_014715 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LOR96_014720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LOR96_014725 PF04380 Membrane fusogenic activity LOR96_014735 PF01467 Cytidylyltransferase-like LOR96_014735 PF00294 pfkB family carbohydrate kinase LOR96_014740 PF08335 GlnD PII-uridylyltransferase LOR96_014740 PF03710 Glutamate-ammonia ligase adenylyltransferase LOR96_014745 PF01928 CYTH domain LOR96_014750 PF08239 Bacterial SH3 domain LOR96_014755 PF12627 Probable RNA and SrmB- binding site of polymerase A LOR96_014755 PF01966 HD domain LOR96_014755 PF01743 Poly A polymerase head domain LOR96_014760 PF02673 Bacitracin resistance protein BacA LOR96_014765 PF02152 Dihydroneopterin aldolase LOR96_014770 PF02660 Glycerol-3-phosphate acyltransferase LOR96_014775 PF00814 Glycoprotease family LOR96_014780 PF01165 Ribosomal protein S21 LOR96_014785 PF10410 DnaB-helicase binding domain of primase LOR96_014785 PF08278 DNA primase DnaG DnaB-binding LOR96_014785 PF08275 DNA primase catalytic core, N-terminal domain LOR96_014785 PF01807 CHC2 zinc finger LOR96_014790 PF04546 Sigma-70, non-essential region LOR96_014790 PF00140 Sigma-70 factor, region 1.2 LOR96_014790 PF04542 Sigma-70 region 2 LOR96_014790 PF04539 Sigma-70 region 3 LOR96_014790 PF04545 Sigma-70, region 4 LOR96_014790 PF03979 Sigma-70 factor, region 1.1 LOR96_014815 PF00106 short chain dehydrogenase LOR96_014840 PF08241 Methyltransferase domain LOR96_014845 PF00535 Glycosyl transferase family 2 LOR96_014880 PF13018 Extended Signal Peptide of Type V secretion system LOR96_014880 PF04829 Pre-toxin domain with VENN motif LOR96_014880 PF13332 Hemagglutinin repeat LOR96_014880 PF05860 haemagglutination activity domain LOR96_014885 PF13018 Extended Signal Peptide of Type V secretion system LOR96_014885 PF13332 Hemagglutinin repeat LOR96_014885 PF05860 haemagglutination activity domain LOR96_014885 PF04829 Pre-toxin domain with VENN motif LOR96_014895 PF08479 POTRA domain, ShlB-type LOR96_014895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LOR96_014895 PF17287 POTRA domain LOR96_014900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LOR96_014900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_014905 PF05175 Methyltransferase small domain LOR96_014915 PF01863 Protein of unknown function DUF45 LOR96_014920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOR96_014925 PF03741 Integral membrane protein TerC family LOR96_014930 PF00375 Sodium:dicarboxylate symporter family LOR96_014935 PF10688 Bacterial inner membrane protein LOR96_014940 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LOR96_014940 PF08666 SAF domain LOR96_014945 PF01232 Mannitol dehydrogenase Rossmann domain LOR96_014945 PF08125 Mannitol dehydrogenase C-terminal domain LOR96_014950 PF02614 Glucuronate isomerase LOR96_014955 PF07690 Major Facilitator Superfamily LOR96_014960 PF00392 Bacterial regulatory proteins, gntR family LOR96_014960 PF07729 FCD domain LOR96_014970 PF09335 SNARE associated Golgi protein LOR96_014975 PF13721 SecD export protein N-terminal TM region LOR96_014985 PF05957 Bacterial protein of unknown function (DUF883) LOR96_014990 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LOR96_014995 PF13997 YqjK-like protein LOR96_015000 PF07681 DoxX LOR96_015005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_015005 PF03466 LysR substrate binding domain LOR96_015010 PF02678 Pirin LOR96_015010 PF17954 Quercetinase C-terminal cupin domain LOR96_015025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOR96_015030 PF04348 LppC putative lipoprotein LOR96_015035 PF02021 Uncharacterised protein family UPF0102 LOR96_015040 PF13580 SIS domain LOR96_015045 PF04972 BON domain LOR96_015050 PF00912 Transglycosylase LOR96_015060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_015060 PF00512 His Kinase A (phospho-acceptor) domain LOR96_015060 PF01627 Hpt domain LOR96_015060 PF00989 PAS fold LOR96_015060 PF00072 Response regulator receiver domain LOR96_015060 PF18415 Histidine kinase receptor ArcB trans-membrane domain LOR96_015065 PF04055 Radical SAM superfamily LOR96_015065 PF16199 Radical_SAM C-terminal domain LOR96_015070 PF04898 Glutamate synthase central domain LOR96_015070 PF00310 Glutamine amidotransferases class-II LOR96_015070 PF01645 Conserved region in glutamate synthase LOR96_015070 PF01493 GXGXG motif LOR96_015075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LOR96_015075 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_015085 PF04386 Stringent starvation protein B LOR96_015090 PF00043 Glutathione S-transferase, C-terminal domain LOR96_015090 PF02798 Glutathione S-transferase, N-terminal domain LOR96_015095 PF00380 Ribosomal protein S9/S16 LOR96_015100 PF00572 Ribosomal protein L13 LOR96_015105 PF03969 AFG1-like ATPase LOR96_015110 PF06295 Protein of unknown function (DUF1043) LOR96_015115 PF00595 PDZ domain LOR96_015115 PF13180 PDZ domain LOR96_015120 PF13180 PDZ domain LOR96_015125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LOR96_015130 PF01722 BolA-like protein LOR96_015135 PF13466 STAS domain LOR96_015140 PF05494 MlaC protein LOR96_015145 PF02470 MlaD protein LOR96_015150 PF02405 Permease MlaE LOR96_015155 PF00005 ABC transporter LOR96_015160 PF01699 Sodium/calcium exchanger protein LOR96_015165 PF01380 SIS domain LOR96_015165 PF00571 CBS domain LOR96_015175 PF06835 Lipopolysaccharide-assembly, LptC-related LOR96_015180 PF03968 OstA-like protein LOR96_015185 PF00005 ABC transporter LOR96_015185 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOR96_015190 PF00309 Sigma-54 factor, Activator interacting domain (AID) LOR96_015190 PF04963 Sigma-54 factor, core binding domain LOR96_015190 PF04552 Sigma-54, DNA binding domain LOR96_015195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LOR96_015200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOR96_015205 PF03668 P-loop ATPase protein family LOR96_015210 PF00381 PTS HPr component phosphorylation site LOR96_015215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LOR96_015215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LOR96_015220 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LOR96_015220 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LOR96_015225 PF01042 Endoribonuclease L-PSP LOR96_015230 PF00128 Alpha amylase, catalytic domain LOR96_015230 PF11941 Domain of unknown function (DUF3459) LOR96_015235 PF00367 phosphotransferase system, EIIB LOR96_015235 PF02378 Phosphotransferase system, EIIC LOR96_015240 PF00356 Bacterial regulatory proteins, lacI family LOR96_015245 PF00689 Cation transporting ATPase, C-terminus LOR96_015245 PF00690 Cation transporter/ATPase, N-terminus LOR96_015255 PF01272 Transcription elongation factor, GreA/GreB, C-term LOR96_015255 PF14760 Rnk N-terminus LOR96_015260 PF07361 Cytochrome b562 LOR96_015265 PF01523 Putative modulator of DNA gyrase LOR96_015270 PF04751 Protein of unknown function (DUF615) LOR96_015275 PF01337 Barstar (barnase inhibitor) LOR96_015280 PF00545 ribonuclease LOR96_015285 PF00171 Aldehyde dehydrogenase family LOR96_015290 PF04632 Fusaric acid resistance protein family LOR96_015295 PF13533 Biotin-lipoyl like LOR96_015300 PF07869 Protein of unknown function (DUF1656) LOR96_015305 PF03466 LysR substrate binding domain LOR96_015305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_015310 PF01523 Putative modulator of DNA gyrase LOR96_015315 PF00795 Carbon-nitrogen hydrolase LOR96_015320 PF13502 AsmA-like C-terminal region LOR96_015320 PF13116 Protein of unknown function LOR96_015325 PF10150 Ribonuclease E/G family LOR96_015325 PF00575 S1 RNA binding domain LOR96_015330 PF02545 Maf-like protein LOR96_015335 PF04093 rod shape-determining protein MreD LOR96_015340 PF04085 rod shape-determining protein MreC LOR96_015350 PF00563 EAL domain LOR96_015350 PF17157 Gammaproteobacterial periplasmic sensor domain LOR96_015350 PF00990 Diguanylate cyclase, GGDEF domain LOR96_015355 PF00107 Zinc-binding dehydrogenase LOR96_015355 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_015360 PF00174 Oxidoreductase molybdopterin binding domain LOR96_015365 PF01794 Ferric reductase like transmembrane component LOR96_015370 PF01220 Dehydroquinase class II LOR96_015375 PF00364 Biotin-requiring enzyme LOR96_015380 PF02785 Biotin carboxylase C-terminal domain LOR96_015380 PF00289 Biotin carboxylase, N-terminal domain LOR96_015380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOR96_015385 PF06196 Protein of unknown function (DUF997) LOR96_015390 PF00474 Sodium:solute symporter family LOR96_015400 PF01207 Dihydrouridine synthase (Dus) LOR96_015405 PF02954 Bacterial regulatory protein, Fis family LOR96_015415 PF03279 Bacterial lipid A biosynthesis acyltransferase LOR96_015420 PF00484 Carbonic anhydrase LOR96_015425 PF04172 LrgB-like family LOR96_015430 PF03788 LrgA family LOR96_015435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_015435 PF03466 LysR substrate binding domain LOR96_015440 PF00999 Sodium/hydrogen exchanger family LOR96_015445 PF00860 Permease family LOR96_015455 PF00436 Single-strand binding protein family LOR96_015460 PF17755 UvrA DNA-binding domain LOR96_015460 PF17760 UvrA interaction domain LOR96_015460 PF00005 ABC transporter LOR96_015465 PF04237 YjbR LOR96_015470 PF00155 Aminotransferase class I and II LOR96_015475 PF00842 Alanine racemase, C-terminal domain LOR96_015475 PF01168 Alanine racemase, N-terminal domain LOR96_015480 PF00772 DnaB-like helicase N terminal domain LOR96_015480 PF03796 DnaB-like helicase C terminal domain LOR96_015485 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_015485 PF00107 Zinc-binding dehydrogenase LOR96_015490 PF09583 Phage shock protein G (Phageshock_PspG) LOR96_015495 PF01207 Dihydrouridine synthase (Dus) LOR96_015500 PF01475 Ferric uptake regulator family LOR96_015505 PF01726 LexA DNA binding domain LOR96_015505 PF00717 Peptidase S24-like LOR96_015510 PF01219 Prokaryotic diacylglycerol kinase LOR96_015515 PF01553 Acyltransferase LOR96_015520 PF01040 UbiA prenyltransferase family LOR96_015525 PF04345 Chorismate lyase LOR96_015530 PF07148 Maltose operon periplasmic protein precursor (MalM) LOR96_015535 PF02264 LamB porin LOR96_015540 PF00005 ABC transporter LOR96_015540 PF17912 MalK OB fold domain LOR96_015550 PF01547 Bacterial extracellular solute-binding protein LOR96_015555 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_015555 PF14785 Maltose transport system permease protein MalF P2 domain LOR96_015560 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_015565 PF06146 Phosphate-starvation-inducible E LOR96_015570 PF00342 Phosphoglucose isomerase LOR96_015575 PF00696 Amino acid kinase family LOR96_015575 PF01842 ACT domain LOR96_015580 PF08479 POTRA domain, ShlB-type LOR96_015580 PF17287 POTRA domain LOR96_015580 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LOR96_015585 PF13332 Hemagglutinin repeat LOR96_015585 PF05860 haemagglutination activity domain LOR96_015590 PF00872 Transposase, Mutator family LOR96_015595 PF07979 Intimin C-type lectin domain LOR96_015595 PF02369 Bacterial Ig-like domain (group 1) LOR96_015595 PF11924 Inverse autotransporter, beta-domain LOR96_015595 PF09134 Invasin, domain 3 LOR96_015600 PF00872 Transposase, Mutator family LOR96_015605 PF09134 Invasin, domain 3 LOR96_015605 PF07979 Intimin C-type lectin domain LOR96_015605 PF11924 Inverse autotransporter, beta-domain LOR96_015605 PF02369 Bacterial Ig-like domain (group 1) LOR96_015615 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LOR96_015625 PF17862 AAA+ lid domain LOR96_015625 PF01434 Peptidase family M41 LOR96_015625 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_015705 PF03466 LysR substrate binding domain LOR96_015705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_015725 PF02310 B12 binding domain LOR96_015725 PF02607 B12 binding domain LOR96_015725 PF02965 Vitamin B12 dependent methionine synthase, activation domain LOR96_015725 PF02574 Homocysteine S-methyltransferase LOR96_015725 PF00809 Pterin binding enzyme LOR96_015730 PF01614 Bacterial transcriptional regulator LOR96_015730 PF09339 IclR helix-turn-helix domain LOR96_015735 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LOR96_015740 PF00463 Isocitrate lyase family LOR96_015745 PF01274 Malate synthase LOR96_015750 PF04204 Homoserine O-succinyltransferase LOR96_015785 PF01808 AICARFT/IMPCHase bienzyme LOR96_015785 PF02142 MGS-like domain LOR96_015790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LOR96_015790 PF02843 Phosphoribosylglycinamide synthetase, C domain LOR96_015790 PF02844 Phosphoribosylglycinamide synthetase, N domain LOR96_015795 PF07356 Protein of unknown function (DUF1481) LOR96_015800 PF00216 Bacterial DNA-binding protein LOR96_015805 PF04222 Protein of unknown function (DUF416) LOR96_015810 PF04493 Endonuclease V LOR96_015815 PF01208 Uroporphyrinogen decarboxylase (URO-D) LOR96_015820 PF09297 NADH pyrophosphatase zinc ribbon domain LOR96_015820 PF00293 NUDIX domain LOR96_015825 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LOR96_015830 PF13667 ThiC-associated domain LOR96_015830 PF01964 Radical SAM ThiC family LOR96_015835 PF02581 Thiamine monophosphate synthase LOR96_015840 PF00899 ThiF family LOR96_015845 PF02597 ThiS family LOR96_015850 PF05690 Thiazole biosynthesis protein ThiG LOR96_015855 PF06968 Biotin and Thiamin Synthesis associated domain LOR96_015855 PF04055 Radical SAM superfamily LOR96_015860 PF05000 RNA polymerase Rpb1, domain 4 LOR96_015860 PF04998 RNA polymerase Rpb1, domain 5 LOR96_015860 PF04997 RNA polymerase Rpb1, domain 1 LOR96_015860 PF00623 RNA polymerase Rpb1, domain 2 LOR96_015860 PF04983 RNA polymerase Rpb1, domain 3 LOR96_015865 PF04563 RNA polymerase beta subunit LOR96_015865 PF04561 RNA polymerase Rpb2, domain 2 LOR96_015865 PF04565 RNA polymerase Rpb2, domain 3 LOR96_015865 PF10385 RNA polymerase beta subunit external 1 domain LOR96_015865 PF00562 RNA polymerase Rpb2, domain 6 LOR96_015865 PF04560 RNA polymerase Rpb2, domain 7 LOR96_015870 PF00542 Ribosomal protein L7/L12 C-terminal domain LOR96_015870 PF16320 Ribosomal protein L7/L12 dimerisation domain LOR96_015875 PF00466 Ribosomal protein L10 LOR96_015880 PF00687 Ribosomal protein L1p/L10e family LOR96_015885 PF03946 Ribosomal protein L11, N-terminal domain LOR96_015885 PF00298 Ribosomal protein L11, RNA binding domain LOR96_015890 PF00467 KOW motif LOR96_015890 PF02357 Transcription termination factor nusG LOR96_015895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LOR96_015900 PF00009 Elongation factor Tu GTP binding domain LOR96_015900 PF03144 Elongation factor Tu domain 2 LOR96_015900 PF03143 Elongation factor Tu C-terminal domain LOR96_015925 PF00485 Phosphoribulokinase / Uridine kinase family LOR96_015930 PF02237 Biotin protein ligase C terminal domain LOR96_015930 PF03099 Biotin/lipoate A/B protein ligase family LOR96_015930 PF08279 HTH domain LOR96_015935 PF01565 FAD binding domain LOR96_015935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LOR96_015960 PF12724 Flavodoxin domain LOR96_015965 PF02386 Cation transport protein LOR96_015970 PF09186 Domain of unknown function (DUF1949) LOR96_015970 PF01205 Uncharacterized protein family UPF0029 LOR96_015975 PF00557 Metallopeptidase family M24 LOR96_015980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOR96_015980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOR96_015980 PF00378 Enoyl-CoA hydratase/isomerase LOR96_015985 PF00108 Thiolase, N-terminal domain LOR96_015985 PF02803 Thiolase, C-terminal domain LOR96_015990 PF00175 Oxidoreductase NAD-binding domain LOR96_015990 PF00970 Oxidoreductase FAD-binding domain LOR96_015995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LOR96_016005 PF02357 Transcription termination factor nusG LOR96_016010 PF00490 Delta-aminolevulinic acid dehydratase LOR96_016015 PF01026 TatD related DNase LOR96_016020 PF00902 Sec-independent protein translocase protein (TatC) LOR96_016030 PF02416 mttA/Hcf106 family LOR96_016035 PF03109 ABC1 family LOR96_016040 PF02036 SCP-2 sterol transfer family LOR96_016045 PF01209 ubiE/COQ5 methyltransferase family LOR96_016050 PF02646 RmuC family LOR96_016055 PF09335 SNARE associated Golgi protein LOR96_016060 PF02554 Carbon starvation protein CstA LOR96_016060 PF13722 5TM C-terminal transporter carbon starvation CstA LOR96_016070 PF01048 Phosphorylase superfamily LOR96_016075 PF01738 Dienelactone hydrolase family LOR96_016080 PF01717 Cobalamin-independent synthase, Catalytic domain LOR96_016080 PF08267 Cobalamin-independent synthase, N-terminal domain LOR96_016085 PF03466 LysR substrate binding domain LOR96_016085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_016090 PF00892 EamA-like transporter family LOR96_016100 PF03009 Glycerophosphoryl diester phosphodiesterase family LOR96_016105 PF00005 ABC transporter LOR96_016105 PF17912 MalK OB fold domain LOR96_016110 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_016115 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_016120 PF13416 Bacterial extracellular solute-binding protein LOR96_016155 PF00005 ABC transporter LOR96_016160 PF00005 ABC transporter LOR96_016160 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOR96_016165 PF11862 Domain of unknown function (DUF3382) LOR96_016165 PF02653 Branched-chain amino acid transport system / permease component LOR96_016170 PF02653 Branched-chain amino acid transport system / permease component LOR96_016175 PF13458 Periplasmic binding protein LOR96_016180 PF12568 Acetyltransferase (GNAT) domain, PanZ LOR96_016185 PF02595 Glycerate kinase family LOR96_016190 PF02447 GntP family permease LOR96_016195 PF05651 Putative sugar diacid recognition LOR96_016195 PF17853 GGDEF-like domain LOR96_016195 PF13556 PucR C-terminal helix-turn-helix domain LOR96_016200 PF04545 Sigma-70, region 4 LOR96_016200 PF00140 Sigma-70 factor, region 1.2 LOR96_016200 PF04542 Sigma-70 region 2 LOR96_016205 PF02687 FtsX-like permease family LOR96_016205 PF18075 FtsX extracellular domain LOR96_016210 PF00005 ABC transporter LOR96_016215 PF00448 SRP54-type protein, GTPase domain LOR96_016215 PF02881 SRP54-type protein, helical bundle domain LOR96_016215 PF00448 SRP54-type protein, GTPase domain LOR96_016215 PF02881 SRP54-type protein, helical bundle domain LOR96_016225 PF06611 Protein of unknown function (DUF1145) LOR96_016240 PF07947 YhhN family LOR96_016245 PF00403 Heavy-metal-associated domain LOR96_016250 PF01206 Sulfurtransferase TusA LOR96_016255 PF02592 Putative vitamin uptake transporter LOR96_016260 PF08786 DcrB LOR96_016265 PF02754 Cysteine-rich domain LOR96_016265 PF13183 4Fe-4S dicluster domain LOR96_016270 PF00890 FAD binding domain LOR96_016275 PF01266 FAD dependent oxidoreductase LOR96_016275 PF04324 BFD-like [2Fe-2S] binding domain LOR96_016285 PF07690 Major Facilitator Superfamily LOR96_016290 PF03009 Glycerophosphoryl diester phosphodiesterase family LOR96_016300 PF12146 Serine aminopeptidase, S33 LOR96_016305 PF01810 LysE type translocator LOR96_016310 PF00270 DEAD/DEAH box helicase LOR96_016310 PF00271 Helicase conserved C-terminal domain LOR96_016310 PF00570 HRDC domain LOR96_016310 PF16124 RecQ zinc-binding LOR96_016310 PF09382 RQC domain LOR96_016315 PF02253 Phospholipase A1 LOR96_016320 PF03061 Thioesterase superfamily LOR96_016325 PF00892 EamA-like transporter family LOR96_016330 PF01544 CorA-like Mg2+ transporter protein LOR96_016340 PF09370 Phosphoenolpyruvate hydrolase-like LOR96_016355 PF00580 UvrD/REP helicase N-terminal domain LOR96_016355 PF13361 UvrD-like helicase C-terminal domain LOR96_016360 PF13419 Haloacid dehalogenase-like hydrolase LOR96_016365 PF00589 Phage integrase family LOR96_016365 PF02899 Phage integrase, N-terminal SAM-like domain LOR96_016370 PF04340 Protein of unknown function, DUF484 LOR96_016375 PF01678 Diaminopimelate epimerase LOR96_016380 PF13627 Prokaryotic lipoprotein-attachment site LOR96_016385 PF01491 Frataxin-like domain LOR96_016390 PF01295 Adenylate cyclase, class-I LOR96_016390 PF12633 Adenylate cyclase NT domain LOR96_016395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LOR96_016395 PF03900 Porphobilinogen deaminase, C-terminal domain LOR96_016400 PF02602 Uroporphyrinogen-III synthase HemD LOR96_016405 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LOR96_016410 PF07219 HemY protein N-terminus LOR96_016410 PF07719 Tetratricopeptide repeat LOR96_016440 PF00324 Amino acid permease LOR96_016445 PF03808 Glycosyl transferase WecB/TagA/CpsF family LOR96_016450 PF06899 WzyE protein, O-antigen assembly polymerase LOR96_016455 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LOR96_016460 PF01943 Polysaccharide biosynthesis protein LOR96_016465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LOR96_016475 PF00483 Nucleotidyl transferase LOR96_016480 PF16363 GDP-mannose 4,6 dehydratase LOR96_016485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LOR96_016485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LOR96_016485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LOR96_016490 PF02350 UDP-N-acetylglucosamine 2-epimerase LOR96_016495 PF02706 Chain length determinant protein LOR96_016500 PF00953 Glycosyl transferase family 4 LOR96_016505 PF07497 Rho termination factor, RNA-binding domain LOR96_016505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOR96_016505 PF07498 Rho termination factor, N-terminal domain LOR96_016510 PF00085 Thioredoxin LOR96_016515 PF00270 DEAD/DEAH box helicase LOR96_016515 PF00271 Helicase conserved C-terminal domain LOR96_016520 PF02541 Ppx/GppA phosphatase family LOR96_016525 PF00580 UvrD/REP helicase N-terminal domain LOR96_016525 PF13361 UvrD-like helicase C-terminal domain LOR96_016535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LOR96_016535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LOR96_016540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_016540 PF03466 LysR substrate binding domain LOR96_016545 PF18416 N-acetylglucosamine binding protein domain 2 LOR96_016545 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LOR96_016550 PF00585 C-terminal regulatory domain of Threonine dehydratase LOR96_016550 PF00291 Pyridoxal-phosphate dependent enzyme LOR96_016555 PF00920 Dehydratase family LOR96_016560 PF01063 Amino-transferase class IV LOR96_016570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOR96_016570 PF00205 Thiamine pyrophosphate enzyme, central domain LOR96_016570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOR96_016575 PF08046 IlvGEDA operon leader peptide LOR96_016580 PF01078 Magnesium chelatase, subunit ChlI LOR96_016580 PF13335 Magnesium chelatase, subunit ChlI C-terminal LOR96_016585 PF04219 Protein of unknown function, DUF LOR96_016590 PF03466 LysR substrate binding domain LOR96_016590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_016640 PF01177 Asp/Glu/Hydantoin racemase LOR96_016645 PF00593 TonB dependent receptor LOR96_016645 PF07715 TonB-dependent Receptor Plug Domain LOR96_016650 PF05958 tRNA (Uracil-5-)-methyltransferase LOR96_016655 PF07226 Protein of unknown function (DUF1422) LOR96_016660 PF00440 Bacterial regulatory proteins, tetR family LOR96_016665 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_016665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOR96_016670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_016670 PF03466 LysR substrate binding domain LOR96_016675 PF00462 Glutaredoxin LOR96_016675 PF08534 Redoxin LOR96_016680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOR96_016680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOR96_016700 PF00529 HlyD membrane-fusion protein of T1SS LOR96_016705 PF00664 ABC transporter transmembrane region LOR96_016705 PF00005 ABC transporter LOR96_016715 PF07715 TonB-dependent Receptor Plug Domain LOR96_016715 PF00593 TonB dependent receptor LOR96_016720 PF14698 Argininosuccinate lyase C-terminal LOR96_016720 PF00206 Lyase LOR96_016725 PF00764 Arginosuccinate synthase LOR96_016730 PF00696 Amino acid kinase family LOR96_016735 PF01118 Semialdehyde dehydrogenase, NAD binding domain LOR96_016735 PF02774 Semialdehyde dehydrogenase, dimerisation domain LOR96_016740 PF01546 Peptidase family M20/M25/M40 LOR96_016740 PF07687 Peptidase dimerisation domain LOR96_016745 PF00311 Phosphoenolpyruvate carboxylase LOR96_016755 PF02219 Methylenetetrahydrofolate reductase LOR96_016775 PF00742 Homoserine dehydrogenase LOR96_016775 PF03447 Homoserine dehydrogenase, NAD binding domain LOR96_016775 PF00696 Amino acid kinase family LOR96_016780 PF01053 Cys/Met metabolism PLP-dependent enzyme LOR96_016785 PF01340 Met Apo-repressor, MetJ LOR96_016790 PF01197 Ribosomal protein L31 LOR96_016795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LOR96_016795 PF17764 3′ DNA-binding domain (3′BD) LOR96_016795 PF00271 Helicase conserved C-terminal domain LOR96_016795 PF00270 DEAD/DEAH box helicase LOR96_016795 PF18074 Primosomal protein N C-terminal domain LOR96_016800 PF00356 Bacterial regulatory proteins, lacI family LOR96_016805 PF05036 Sporulation related domain LOR96_016810 PF00227 Proteasome subunit LOR96_016815 PF10431 C-terminal, D2-small domain, of ClpB protein LOR96_016815 PF07724 AAA domain (Cdc48 subfamily) LOR96_016815 PF00004 ATPase family associated with various cellular activities (AAA) LOR96_016820 PF01040 UbiA prenyltransferase family LOR96_016825 PF03737 Aldolase/RraA LOR96_016830 PF06005 Cell division protein ZapB LOR96_016835 PF00230 Major intrinsic protein LOR96_016840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LOR96_016840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LOR96_016845 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LOR96_016850 PF07690 Major Facilitator Superfamily LOR96_016855 PF00175 Oxidoreductase NAD-binding domain LOR96_016855 PF00970 Oxidoreductase FAD-binding domain LOR96_016860 PF05656 Protein of unknown function (DUF805) LOR96_016865 PF07305 Protein of unknown function (DUF1454) LOR96_016870 PF00121 Triosephosphate isomerase LOR96_016880 PF00365 Phosphofructokinase LOR96_016885 PF01545 Cation efflux family LOR96_016885 PF16916 Dimerisation domain of Zinc Transporter LOR96_016890 PF07813 LTXXQ motif family protein LOR96_016895 PF00486 Transcriptional regulatory protein, C terminal LOR96_016895 PF00072 Response regulator receiver domain LOR96_016900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_016900 PF00672 HAMP domain LOR96_016900 PF16527 Two-component sensor protein CpxA, periplasmic domain LOR96_016900 PF00512 His Kinase A (phospho-acceptor) domain LOR96_016905 PF00588 SpoU rRNA Methylase family LOR96_016910 PF06426 Serine acetyltransferase, N-terminal LOR96_016910 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_016915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LOR96_016915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LOR96_016920 PF02556 Preprotein translocase subunit SecB LOR96_016925 PF00462 Glutaredoxin LOR96_016930 PF00581 Rhodanese-like domain LOR96_016935 PF01676 Metalloenzyme superfamily LOR96_016935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LOR96_016940 PF01551 Peptidase family M23 LOR96_016945 PF04748 Divergent polysaccharide deacetylase LOR96_016950 PF00107 Zinc-binding dehydrogenase LOR96_016950 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_016955 PF00155 Aminotransferase class I and II LOR96_016960 PF01370 NAD dependent epimerase/dehydratase family LOR96_016965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOR96_016970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOR96_016975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LOR96_016980 PF00535 Glycosyl transferase family 2 LOR96_016985 PF01467 Cytidylyltransferase-like LOR96_016990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LOR96_016990 PF06827 Zinc finger found in FPG and IleRS LOR96_016990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LOR96_016995 PF00471 Ribosomal protein L33 LOR96_017000 PF00830 Ribosomal L28 family LOR96_017005 PF04002 RadC-like JAB domain LOR96_017010 PF04127 DNA / pantothenate metabolism flavoprotein LOR96_017010 PF02441 Flavoprotein LOR96_017015 PF00692 dUTPase LOR96_017020 PF00440 Bacterial regulatory proteins, tetR family LOR96_017025 PF00156 Phosphoribosyl transferase domain LOR96_017030 PF03725 3' exoribonuclease family, domain 2 LOR96_017030 PF01138 3' exoribonuclease family, domain 1 LOR96_017035 PF03755 YicC-like family, N-terminal region LOR96_017035 PF08340 Domain of unknown function (DUF1732) LOR96_017045 PF03466 LysR substrate binding domain LOR96_017045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOR96_017050 PF00990 Diguanylate cyclase, GGDEF domain LOR96_017050 PF13426 PAS domain LOR96_017050 PF00563 EAL domain LOR96_017055 PF00378 Enoyl-CoA hydratase/isomerase LOR96_017060 PF01773 Na+ dependent nucleoside transporter N-terminus LOR96_017060 PF07662 Na+ dependent nucleoside transporter C-terminus LOR96_017060 PF07670 Nucleoside recognition LOR96_017070 PF03458 UPF0126 domain LOR96_017075 PF01653 NAD-dependent DNA ligase adenylation domain LOR96_017075 PF03120 NAD-dependent DNA ligase OB-fold domain LOR96_017080 PF00625 Guanylate kinase LOR96_017085 PF01192 RNA polymerase Rpb6 LOR96_017090 PF02824 TGS domain LOR96_017090 PF04607 Region found in RelA / SpoT proteins LOR96_017090 PF13291 ACT domain LOR96_017095 PF00588 SpoU rRNA Methylase family LOR96_017095 PF12105 SpoU, rRNA methylase, C-terminal LOR96_017100 PF00270 DEAD/DEAH box helicase LOR96_017100 PF17191 RecG wedge domain LOR96_017100 PF00271 Helicase conserved C-terminal domain LOR96_017105 PF03616 Sodium/glutamate symporter LOR96_017110 PF00860 Permease family LOR96_017115 PF05170 AsmA family LOR96_017120 PF00583 Acetyltransferase (GNAT) family LOR96_017120 PF09500 Putative thioesterase (yiiD_Cterm) LOR96_017125 PF02580 D-Tyr-tRNA(Tyr) deacylase LOR96_017130 PF03631 Virulence factor BrkB LOR96_017135 PF13419 Haloacid dehalogenase-like hydrolase LOR96_017140 PF00009 Elongation factor Tu GTP binding domain LOR96_017140 PF03144 Elongation factor Tu domain 2 LOR96_017140 PF00679 Elongation factor G C-terminus LOR96_017145 PF00120 Glutamine synthetase, catalytic domain LOR96_017145 PF03951 Glutamine synthetase, beta-Grasp domain LOR96_017150 PF00989 PAS fold LOR96_017150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOR96_017150 PF00512 His Kinase A (phospho-acceptor) domain LOR96_017155 PF00158 Sigma-54 interaction domain LOR96_017155 PF00072 Response regulator receiver domain LOR96_017155 PF02954 Bacterial regulatory protein, Fis family LOR96_017160 PF04055 Radical SAM superfamily LOR96_017160 PF06969 HemN C-terminal domain LOR96_017165 PF04220 Der GTPase activator (YihI) LOR96_017170 PF01926 50S ribosome-binding GTPase LOR96_017175 PF01612 3'-5' exonuclease LOR96_017175 PF00476 DNA polymerase family A LOR96_017175 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LOR96_017175 PF01367 5'-3' exonuclease, C-terminal SAM fold LOR96_017180 PF01323 DSBA-like thioredoxin domain LOR96_017185 PF01636 Phosphotransferase enzyme family LOR96_017190 PF06288 Protein of unknown function (DUF1040) LOR96_017195 PF12804 MobA-like NTP transferase domain LOR96_017200 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LOR96_017225 PF00392 Bacterial regulatory proteins, gntR family LOR96_017225 PF07729 FCD domain LOR96_017230 PF00356 Bacterial regulatory proteins, lacI family LOR96_017235 PF00294 pfkB family carbohydrate kinase LOR96_017240 PF13407 Periplasmic binding protein domain LOR96_017245 PF02653 Branched-chain amino acid transport system / permease component LOR96_017250 PF00005 ABC transporter LOR96_017255 PF05025 RbsD / FucU transport protein family LOR96_017260 PF02705 K+ potassium transporter LOR96_017265 PF17868 AAA lid domain LOR96_017265 PF12592 Protein of unknown function (DUF3763) LOR96_017265 PF07728 AAA domain (dynein-related subfamily) LOR96_017270 PF05762 VWA domain containing CoxE-like protein LOR96_017280 PF03590 Aspartate-ammonia ligase LOR96_017285 PF01037 Lrp/AsnC ligand binding domain LOR96_017290 PF00258 Flavodoxin LOR96_017295 PF13932 GidA associated domain LOR96_017295 PF01134 Glucose inhibited division protein A LOR96_017300 PF02527 rRNA small subunit methyltransferase G LOR96_017305 PF03899 ATP synthase I chain LOR96_017310 PF00119 ATP synthase A chain LOR96_017315 PF00137 ATP synthase subunit C LOR96_017320 PF00430 ATP synthase B/B' CF(0) LOR96_017325 PF00213 ATP synthase delta (OSCP) subunit LOR96_017330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOR96_017330 PF02874 ATP synthase alpha/beta family, beta-barrel domain LOR96_017330 PF00306 ATP synthase alpha/beta chain, C terminal domain LOR96_017335 PF00231 ATP synthase LOR96_017340 PF02874 ATP synthase alpha/beta family, beta-barrel domain LOR96_017340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOR96_017345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LOR96_017345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LOR96_017350 PF12804 MobA-like NTP transferase domain LOR96_017350 PF00132 Bacterial transferase hexapeptide (six repeats) LOR96_017355 PF01380 SIS domain LOR96_017360 PF12849 PBP superfamily domain LOR96_017365 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_017370 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_017375 PF00005 ABC transporter LOR96_017380 PF01895 PhoU domain LOR96_017385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOR96_017390 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_017395 PF00528 Binding-protein-dependent transport system inner membrane component LOR96_017400 PF00860 Permease family LOR96_017405 PF00672 HAMP domain LOR96_017405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOR96_017405 PF02203 Tar ligand binding domain homologue LOR96_017415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LOR96_017415 PF02753 Pili assembly chaperone PapD, C-terminal domain LOR96_017420 PF00577 Outer membrane usher protein LOR96_017420 PF13954 PapC N-terminal domain LOR96_017420 PF13953 PapC C-terminal domain LOR96_017430 PF10396 GTP-binding protein TrmE N-terminus LOR96_017430 PF12631 MnmE helical domain LOR96_017430 PF01926 50S ribosome-binding GTPase LOR96_017435 PF14849 YidC periplasmic domain LOR96_017435 PF02096 60Kd inner membrane protein LOR96_017440 PF01809 Putative membrane protein insertion efficiency factor LOR96_017445 PF00825 Ribonuclease P LOR96_017450 PF00468 Ribosomal protein L34 LOR96_017460 PF13610 DDE domain LOR96_017465 PF02796 Helix-turn-helix domain of resolvase LOR96_017465 PF00239 Resolvase, N terminal domain LOR96_017470 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LOR96_017475 PF13610 DDE domain LOR96_017490 PF00756 Putative esterase LOR96_017500 PF00107 Zinc-binding dehydrogenase LOR96_017500 PF08240 Alcohol dehydrogenase GroES-like domain LOR96_017505 PF02583 Metal-sensitive transcriptional repressor LOR96_017510 PF00465 Iron-containing alcohol dehydrogenase LOR96_017530 PF02796 Helix-turn-helix domain of resolvase LOR96_017530 PF00239 Resolvase, N terminal domain LOR96_017615 PF00437 Type II/IV secretion system protein LOR96_017630 PF01464 Transglycosylase SLT domain LOR96_017640 PF04917 Bacterial shufflon protein, N-terminal constant region LOR96_017645 PF00239 Resolvase, N terminal domain LOR96_017645 PF02796 Helix-turn-helix domain of resolvase LOR96_017655 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LOR96_017660 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LOR96_017675 PF02796 Helix-turn-helix domain of resolvase LOR96_017675 PF00239 Resolvase, N terminal domain LOR96_017685 PF13614 AAA domain LOR96_017690 PF06406 StbA protein LOR96_017755 PF01381 Helix-turn-helix LOR96_017780 PF18821 Large polyvalent protein-associated domain 7 LOR96_017780 PF03432 Relaxase/Mobilisation nuclease domain LOR96_017885 PF13362 Toprim domain LOR96_017885 PF18818 Metallopeptidase superfamily domain LOR96_017885 PF08401 Domain of unknown function (DUF1738) LOR96_017895 PF00437 Type II/IV secretion system protein LOR96_017920 PF13693 Winged helix-turn-helix DNA-binding LOR96_017985 PF06252 Protein of unknown function (DUF1018) LOR96_018040 PF06074 Protein of unknown function (DUF935) LOR96_018065 PF10124 Mu-like prophage major head subunit gpT LOR96_018090 PF17482 Phage tail sheath C-terminal domain LOR96_018090 PF04984 Phage tail sheath protein subtilisin-like domain