locus-tag class description ND445_00010 PF00696 Amino acid kinase family ND445_00010 PF00742 Homoserine dehydrogenase ND445_00010 PF03447 Homoserine dehydrogenase, NAD binding domain ND445_00015 PF01053 Cys/Met metabolism PLP-dependent enzyme ND445_00020 PF01340 Met Apo-repressor, MetJ ND445_00025 PF01197 Ribosomal protein L31 ND445_00030 PF18074 Primosomal protein N C-terminal domain ND445_00030 PF17764 3′ DNA-binding domain (3′BD) ND445_00030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND445_00030 PF00270 DEAD/DEAH box helicase ND445_00030 PF00271 Helicase conserved C-terminal domain ND445_00035 PF00356 Bacterial regulatory proteins, lacI family ND445_00040 PF05036 Sporulation related domain ND445_00045 PF00227 Proteasome subunit ND445_00050 PF00004 ATPase family associated with various cellular activities (AAA) ND445_00050 PF07724 AAA domain (Cdc48 subfamily) ND445_00050 PF10431 C-terminal, D2-small domain, of ClpB protein ND445_00055 PF01040 UbiA prenyltransferase family ND445_00060 PF03737 Aldolase/RraA ND445_00065 PF06005 Cell division protein ZapB ND445_00070 PF00230 Major intrinsic protein ND445_00075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND445_00075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND445_00080 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND445_00085 PF07690 Major Facilitator Superfamily ND445_00090 PF00970 Oxidoreductase FAD-binding domain ND445_00090 PF00175 Oxidoreductase NAD-binding domain ND445_00095 PF05656 Protein of unknown function (DUF805) ND445_00100 PF07305 Protein of unknown function (DUF1454) ND445_00105 PF00121 Triosephosphate isomerase ND445_00115 PF00365 Phosphofructokinase ND445_00120 PF16916 Dimerisation domain of Zinc Transporter ND445_00120 PF01545 Cation efflux family ND445_00125 PF07813 LTXXQ motif family protein ND445_00130 PF00072 Response regulator receiver domain ND445_00130 PF00486 Transcriptional regulatory protein, C terminal ND445_00135 PF00512 His Kinase A (phospho-acceptor) domain ND445_00135 PF16527 Two-component sensor protein CpxA, periplasmic domain ND445_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_00135 PF00672 HAMP domain ND445_00140 PF00588 SpoU rRNA Methylase family ND445_00145 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_00145 PF06426 Serine acetyltransferase, N-terminal ND445_00150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND445_00150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND445_00155 PF02556 Preprotein translocase subunit SecB ND445_00160 PF00462 Glutaredoxin ND445_00165 PF00581 Rhodanese-like domain ND445_00170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND445_00170 PF01676 Metalloenzyme superfamily ND445_00175 PF01551 Peptidase family M23 ND445_00180 PF04748 Divergent polysaccharide deacetylase ND445_00185 PF00107 Zinc-binding dehydrogenase ND445_00185 PF08240 Alcohol dehydrogenase GroES-like domain ND445_00190 PF00155 Aminotransferase class I and II ND445_00195 PF01370 NAD dependent epimerase/dehydratase family ND445_00200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND445_00205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND445_00210 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND445_00215 PF00535 Glycosyl transferase family 2 ND445_00220 PF01467 Cytidylyltransferase-like ND445_00225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND445_00225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND445_00225 PF06827 Zinc finger found in FPG and IleRS ND445_00230 PF00471 Ribosomal protein L33 ND445_00235 PF00830 Ribosomal L28 family ND445_00240 PF04002 RadC-like JAB domain ND445_00245 PF02441 Flavoprotein ND445_00245 PF04127 DNA / pantothenate metabolism flavoprotein ND445_00250 PF00692 dUTPase ND445_00255 PF00440 Bacterial regulatory proteins, tetR family ND445_00260 PF00156 Phosphoribosyl transferase domain ND445_00265 PF01138 3' exoribonuclease family, domain 1 ND445_00265 PF03725 3' exoribonuclease family, domain 2 ND445_00270 PF08340 Domain of unknown function (DUF1732) ND445_00270 PF03755 YicC-like family, N-terminal region ND445_00280 PF03466 LysR substrate binding domain ND445_00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_00285 PF00563 EAL domain ND445_00285 PF00990 Diguanylate cyclase, GGDEF domain ND445_00285 PF13426 PAS domain ND445_00290 PF00378 Enoyl-CoA hydratase/isomerase ND445_00295 PF01773 Na+ dependent nucleoside transporter N-terminus ND445_00295 PF07662 Na+ dependent nucleoside transporter C-terminus ND445_00295 PF07670 Nucleoside recognition ND445_00305 PF03458 UPF0126 domain ND445_00310 PF03120 NAD-dependent DNA ligase OB-fold domain ND445_00310 PF01653 NAD-dependent DNA ligase adenylation domain ND445_00315 PF00625 Guanylate kinase ND445_00320 PF01192 RNA polymerase Rpb6 ND445_00325 PF04607 Region found in RelA / SpoT proteins ND445_00325 PF13291 ACT domain ND445_00325 PF02824 TGS domain ND445_00330 PF12105 SpoU, rRNA methylase, C-terminal ND445_00330 PF00588 SpoU rRNA Methylase family ND445_00335 PF00271 Helicase conserved C-terminal domain ND445_00335 PF17191 RecG wedge domain ND445_00335 PF00270 DEAD/DEAH box helicase ND445_00340 PF03616 Sodium/glutamate symporter ND445_00345 PF00860 Permease family ND445_00350 PF05170 AsmA family ND445_00355 PF00583 Acetyltransferase (GNAT) family ND445_00355 PF09500 Putative thioesterase (yiiD_Cterm) ND445_00360 PF02580 D-Tyr-tRNA(Tyr) deacylase ND445_00365 PF03631 Virulence factor BrkB ND445_00370 PF13419 Haloacid dehalogenase-like hydrolase ND445_00375 PF03144 Elongation factor Tu domain 2 ND445_00375 PF00009 Elongation factor Tu GTP binding domain ND445_00375 PF00679 Elongation factor G C-terminus ND445_00380 PF03951 Glutamine synthetase, beta-Grasp domain ND445_00380 PF00120 Glutamine synthetase, catalytic domain ND445_00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_00385 PF00989 PAS fold ND445_00385 PF00512 His Kinase A (phospho-acceptor) domain ND445_00390 PF02954 Bacterial regulatory protein, Fis family ND445_00390 PF00158 Sigma-54 interaction domain ND445_00390 PF00072 Response regulator receiver domain ND445_00395 PF06969 HemN C-terminal domain ND445_00395 PF04055 Radical SAM superfamily ND445_00400 PF04220 Der GTPase activator (YihI) ND445_00405 PF01926 50S ribosome-binding GTPase ND445_00410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND445_00410 PF01367 5'-3' exonuclease, C-terminal SAM fold ND445_00410 PF00476 DNA polymerase family A ND445_00410 PF01612 3'-5' exonuclease ND445_00415 PF01323 DSBA-like thioredoxin domain ND445_00420 PF01636 Phosphotransferase enzyme family ND445_00425 PF06288 Protein of unknown function (DUF1040) ND445_00430 PF12804 MobA-like NTP transferase domain ND445_00435 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND445_00460 PF07729 FCD domain ND445_00460 PF00392 Bacterial regulatory proteins, gntR family ND445_00465 PF00356 Bacterial regulatory proteins, lacI family ND445_00470 PF00294 pfkB family carbohydrate kinase ND445_00475 PF13407 Periplasmic binding protein domain ND445_00480 PF02653 Branched-chain amino acid transport system / permease component ND445_00485 PF00005 ABC transporter ND445_00490 PF05025 RbsD / FucU transport protein family ND445_00495 PF02705 K+ potassium transporter ND445_00500 PF12592 Protein of unknown function (DUF3763) ND445_00500 PF17868 AAA lid domain ND445_00500 PF07728 AAA domain (dynein-related subfamily) ND445_00505 PF05762 VWA domain containing CoxE-like protein ND445_00515 PF03590 Aspartate-ammonia ligase ND445_00520 PF01037 Lrp/AsnC ligand binding domain ND445_00525 PF00258 Flavodoxin ND445_00530 PF01134 Glucose inhibited division protein A ND445_00530 PF13932 GidA associated domain ND445_00535 PF02527 rRNA small subunit methyltransferase G ND445_00540 PF03899 ATP synthase I chain ND445_00545 PF00119 ATP synthase A chain ND445_00550 PF00137 ATP synthase subunit C ND445_00555 PF00430 ATP synthase B/B' CF(0) ND445_00560 PF00213 ATP synthase delta (OSCP) subunit ND445_00565 PF00306 ATP synthase alpha/beta chain, C terminal domain ND445_00565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND445_00565 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND445_00570 PF00231 ATP synthase ND445_00575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND445_00575 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND445_00580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND445_00580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND445_00585 PF12804 MobA-like NTP transferase domain ND445_00585 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_00590 PF01380 SIS domain ND445_00595 PF12849 PBP superfamily domain ND445_00600 PF00528 Binding-protein-dependent transport system inner membrane component ND445_00605 PF00528 Binding-protein-dependent transport system inner membrane component ND445_00610 PF00005 ABC transporter ND445_00615 PF01895 PhoU domain ND445_00620 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_00625 PF00528 Binding-protein-dependent transport system inner membrane component ND445_00630 PF00528 Binding-protein-dependent transport system inner membrane component ND445_00635 PF00860 Permease family ND445_00640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_00640 PF00672 HAMP domain ND445_00640 PF02203 Tar ligand binding domain homologue ND445_00650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_00650 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_00655 PF00577 Outer membrane usher protein ND445_00655 PF13954 PapC N-terminal domain ND445_00655 PF13953 PapC C-terminal domain ND445_00665 PF12631 MnmE helical domain ND445_00665 PF10396 GTP-binding protein TrmE N-terminus ND445_00665 PF01926 50S ribosome-binding GTPase ND445_00670 PF14849 YidC periplasmic domain ND445_00670 PF02096 60Kd inner membrane protein ND445_00675 PF01809 Putative membrane protein insertion efficiency factor ND445_00680 PF00825 Ribonuclease P ND445_00685 PF00468 Ribosomal protein L34 ND445_00690 PF08299 Bacterial dnaA protein helix-turn-helix ND445_00690 PF00308 Bacterial dnaA protein ND445_00690 PF11638 DnaA N-terminal domain ND445_00695 PF00712 DNA polymerase III beta subunit, N-terminal domain ND445_00695 PF02767 DNA polymerase III beta subunit, central domain ND445_00695 PF02768 DNA polymerase III beta subunit, C-terminal domain ND445_00700 PF02463 RecF/RecN/SMC N terminal domain ND445_00705 PF01751 Toprim domain ND445_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_00705 PF18053 DNA gyrase B subunit insert domain ND445_00705 PF00986 DNA gyrase B subunit, carboxyl terminus ND445_00705 PF00204 DNA gyrase B ND445_00715 PF07676 WD40-like Beta Propeller Repeat ND445_00715 PF12566 Protein of unknown function (DUF3748) ND445_00720 PF07119 Protein of unknown function (DUF1375) ND445_00725 PF00011 Hsp20/alpha crystallin family ND445_00730 PF00011 Hsp20/alpha crystallin family ND445_00735 PF02080 TrkA-C domain ND445_00735 PF06826 Predicted Permease Membrane Region ND445_00740 PF00155 Aminotransferase class I and II ND445_00745 PF13488 Glycine zipper ND445_00745 PF00691 OmpA family ND445_00765 PF03352 Methyladenine glycosylase ND445_00775 PF02091 Glycyl-tRNA synthetase alpha subunit ND445_00780 PF05746 DALR anticodon binding domain ND445_00780 PF02092 Glycyl-tRNA synthetase beta subunit ND445_00785 PF11254 Protein of unknown function (DUF3053) ND445_00815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND445_00815 PF02378 Phosphotransferase system, EIIC ND445_00815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND445_00820 PF01232 Mannitol dehydrogenase Rossmann domain ND445_00820 PF08125 Mannitol dehydrogenase C-terminal domain ND445_00825 PF05068 Mannitol repressor ND445_00830 PF10928 Protein of unknown function (DUF2810) ND445_00835 PF03475 3-alpha domain ND445_00835 PF03473 MOSC domain ND445_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_00840 PF02203 Tar ligand binding domain homologue ND445_00840 PF00672 HAMP domain ND445_00845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND445_00845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND445_00850 PF02634 FdhD/NarQ family ND445_00860 PF13247 4Fe-4S dicluster domain ND445_00860 PF09163 Formate dehydrogenase N, transmembrane ND445_00865 PF01292 Prokaryotic cytochrome b561 ND445_00870 PF04216 Protein involved in formate dehydrogenase formation ND445_00875 PF03841 L-seryl-tRNA selenium transferase ND445_00875 PF12390 Selenocysteine synthase N terminal ND445_00880 PF09106 Elongation factor SelB, winged helix ND445_00880 PF09107 Elongation factor SelB, winged helix ND445_00880 PF03144 Elongation factor Tu domain 2 ND445_00880 PF00009 Elongation factor Tu GTP binding domain ND445_00885 PF01427 D-ala-D-ala dipeptidase ND445_00890 PF07690 Major Facilitator Superfamily ND445_00895 PF01757 Acyltransferase family ND445_00905 PF00589 Phage integrase family ND445_00905 PF14659 Phage integrase, N-terminal SAM-like domain ND445_00905 PF13356 Arm DNA-binding domain ND445_00915 PF04606 Ogr/Delta-like zinc finger ND445_00940 PF01175 Urocanase Rossmann-like domain ND445_00940 PF17392 Urocanase C-terminal domain ND445_00940 PF17391 Urocanase N-terminal domain ND445_00945 PF00221 Aromatic amino acid lyase ND445_00950 PF00324 Amino acid permease ND445_00960 PF12146 Serine aminopeptidase, S33 ND445_00965 PF00884 Sulfatase ND445_00965 PF08019 Phosphoethanolamine transferase EptA/EptB ND445_00970 PF00072 Response regulator receiver domain ND445_00970 PF00196 Bacterial regulatory proteins, luxR family ND445_00975 PF07730 Histidine kinase ND445_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_00975 PF05231 MASE1 ND445_00980 PF07690 Major Facilitator Superfamily ND445_00990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_00995 PF00528 Binding-protein-dependent transport system inner membrane component ND445_01000 PF00528 Binding-protein-dependent transport system inner membrane component ND445_01000 PF12911 N-terminal TM domain of oligopeptide transport permease C ND445_01005 PF00005 ABC transporter ND445_01005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_01010 PF00005 ABC transporter ND445_01010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_01015 PF11658 Cellulose biosynthesis protein BcsG ND445_01020 PF11120 Cellulose biosynthesis protein BcsF ND445_01025 PF10995 Cellulose biosynthesis GIL ND445_01035 PF06564 Cellulose biosynthesis protein BcsQ ND445_01040 PF03552 Cellulose synthase ND445_01040 PF00535 Glycosyl transferase family 2 ND445_01040 PF07238 PilZ domain ND445_01045 PF03170 Bacterial cellulose synthase subunit ND445_01050 PF01270 Glycosyl hydrolases family 8 ND445_01055 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND445_01060 PF00990 Diguanylate cyclase, GGDEF domain ND445_01060 PF00672 HAMP domain ND445_01060 PF00563 EAL domain ND445_01060 PF17154 Gammaproteobacterial periplasmic sensor domain ND445_01065 PF00375 Sodium:dicarboxylate symporter family ND445_01070 PF00675 Insulinase (Peptidase family M16) ND445_01070 PF05193 Peptidase M16 inactive domain ND445_01075 PF00294 pfkB family carbohydrate kinase ND445_01080 PF01361 Tautomerase enzyme ND445_01085 PF00563 EAL domain ND445_01090 PF02611 CDP-diacylglycerol pyrophosphatase ND445_01095 PF03631 Virulence factor BrkB ND445_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_01100 PF03466 LysR substrate binding domain ND445_01105 PF00375 Sodium:dicarboxylate symporter family ND445_01110 PF01053 Cys/Met metabolism PLP-dependent enzyme ND445_01115 PF07979 Intimin C-type lectin domain ND445_01115 PF02369 Bacterial Ig-like domain (group 1) ND445_01115 PF09134 Invasin, domain 3 ND445_01115 PF11924 Inverse autotransporter, beta-domain ND445_01120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_01120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND445_01125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND445_01130 PF01432 Peptidase family M3 ND445_01135 PF04445 Putative SAM-dependent methyltransferase ND445_01140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND445_01140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND445_01145 PF00582 Universal stress protein family ND445_01150 PF10625 Universal stress protein B (UspB) ND445_01155 PF01384 Phosphate transporter family ND445_01165 PF01810 LysE type translocator ND445_01170 PF00583 Acetyltransferase (GNAT) family ND445_01180 PF02678 Pirin ND445_01180 PF17954 Quercetinase C-terminal cupin domain ND445_01185 PF00356 Bacterial regulatory proteins, lacI family ND445_01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND445_01190 PF02447 GntP family permease ND445_01195 PF01202 Shikimate kinase ND445_01200 PF01914 MarC family integral membrane protein ND445_01205 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND445_01205 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND445_01210 PF06580 Histidine kinase ND445_01210 PF07694 5TMR of 5TMR-LYT ND445_01215 PF00128 Alpha amylase, catalytic domain ND445_01215 PF02806 Alpha amylase, C-terminal all-beta domain ND445_01215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND445_01220 PF00128 Alpha amylase, catalytic domain ND445_01220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND445_01220 PF18390 Glycogen debranching enzyme C-terminal domain ND445_01225 PF00483 Nucleotidyl transferase ND445_01230 PF00534 Glycosyl transferases group 1 ND445_01230 PF08323 Starch synthase catalytic domain ND445_01235 PF00343 Carbohydrate phosphorylase ND445_01240 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND445_01240 PF01266 FAD dependent oxidoreductase ND445_01245 PF08220 DeoR-like helix-turn-helix domain ND445_01245 PF00455 DeoR C terminal sensor domain ND445_01250 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND445_01250 PF01694 Rhomboid family ND445_01255 PF00581 Rhodanese-like domain ND445_01260 PF17874 MalT-like TPR region ND445_01260 PF00196 Bacterial regulatory proteins, luxR family ND445_01265 PF00343 Carbohydrate phosphorylase ND445_01270 PF02446 4-alpha-glucanotransferase ND445_01275 PF01521 Iron-sulphur cluster biosynthesis ND445_01275 PF01106 NifU-like domain ND445_01280 PF00156 Phosphoribosyl transferase domain ND445_01285 PF00561 alpha/beta hydrolase fold ND445_01295 PF09012 FeoC like transcriptional regulator ND445_01300 PF17910 FeoB cytosolic helical domain ND445_01300 PF02421 Ferrous iron transport protein B ND445_01300 PF07670 Nucleoside recognition ND445_01300 PF07664 Ferrous iron transport protein B C terminus ND445_01305 PF04023 FeoA domain ND445_01310 PF09371 Tex-like protein N-terminal domain ND445_01310 PF17674 HHH domain ND445_01310 PF00575 S1 RNA binding domain ND445_01310 PF16921 Tex protein YqgF-like domain ND445_01335 PF01272 Transcription elongation factor, GreA/GreB, C-term ND445_01335 PF03449 Transcription elongation factor, N-terminal ND445_01340 PF00486 Transcriptional regulatory protein, C terminal ND445_01340 PF00072 Response regulator receiver domain ND445_01345 PF00672 HAMP domain ND445_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_01345 PF00512 His Kinase A (phospho-acceptor) domain ND445_01350 PF01293 Phosphoenolpyruvate carboxykinase ND445_01355 PF01430 Hsp33 protein ND445_01360 PF01479 S4 domain ND445_01365 PF13419 Haloacid dehalogenase-like hydrolase ND445_01370 PF07095 Intracellular growth attenuator protein IgaA ND445_01375 PF00293 NUDIX domain ND445_01380 PF17092 Penicillin-binding protein OB-like domain ND445_01380 PF00905 Penicillin binding protein transpeptidase domain ND445_01380 PF00912 Transglycosylase ND445_01405 PF03958 Bacterial type II/III secretion system short domain ND445_01405 PF00263 Bacterial type II and III secretion system protein ND445_01410 PF01202 Shikimate kinase ND445_01415 PF01761 3-dehydroquinate synthase ND445_01420 PF05036 Sporulation related domain ND445_01425 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND445_01430 PF00834 Ribulose-phosphate 3 epimerase family ND445_01435 PF13419 Haloacid dehalogenase-like hydrolase ND445_01440 PF00579 tRNA synthetases class I (W and Y) ND445_01445 PF10414 Sirohaem synthase dimerisation region ND445_01445 PF14824 Sirohaem biosynthesis protein central ND445_01445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND445_01450 PF01226 Formate/nitrite transporter ND445_01455 PF13806 Rieske-like [2Fe-2S] domain ND445_01460 PF04324 BFD-like [2Fe-2S] binding domain ND445_01460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND445_01460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND445_01460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_01460 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND445_01465 PF07969 Amidohydrolase family ND445_01470 PF07690 Major Facilitator Superfamily ND445_01485 PF00356 Bacterial regulatory proteins, lacI family ND445_01490 PF02056 Family 4 glycosyl hydrolase ND445_01490 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND445_01495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND445_01500 PF00117 Glutamine amidotransferase class-I ND445_01505 PF00202 Aminotransferase class-III ND445_01510 PF12805 FUSC-like inner membrane protein yccS ND445_01515 PF00027 Cyclic nucleotide-binding domain ND445_01515 PF13545 Crp-like helix-turn-helix domain ND445_01520 PF02566 OsmC-like protein ND445_01540 PF00156 Phosphoribosyl transferase domain ND445_01545 PF00291 Pyridoxal-phosphate dependent enzyme ND445_01550 PF00485 Phosphoribulokinase / Uridine kinase family ND445_01555 PF06794 Uncharacterised protein family (UPF0270) ND445_01560 PF00561 alpha/beta hydrolase fold ND445_01565 PF01810 LysE type translocator ND445_01570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND445_01575 PF00535 Glycosyl transferase family 2 ND445_01580 PF12848 ABC transporter ND445_01580 PF00005 ABC transporter ND445_01585 PF02525 Flavodoxin-like fold ND445_01590 PF00999 Sodium/hydrogen exchanger family ND445_01590 PF02254 TrkA-N domain ND445_01595 PF09526 Probable metal-binding protein (DUF2387) ND445_01600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND445_01605 PF04102 SlyX ND445_01610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND445_01610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND445_01615 PF08348 YheO-like PAS domain ND445_01615 PF13309 HTH domain ND445_01620 PF02635 DsrE/DsrF-like family ND445_01625 PF02635 DsrE/DsrF-like family ND445_01630 PF04077 DsrH like protein ND445_01635 PF00164 Ribosomal protein S12/S23 ND445_01640 PF00177 Ribosomal protein S7p/S5e ND445_01645 PF03144 Elongation factor Tu domain 2 ND445_01645 PF00679 Elongation factor G C-terminus ND445_01645 PF14492 Elongation Factor G, domain II ND445_01645 PF03764 Elongation factor G, domain IV ND445_01645 PF00009 Elongation factor Tu GTP binding domain ND445_01650 PF03144 Elongation factor Tu domain 2 ND445_01650 PF03143 Elongation factor Tu C-terminal domain ND445_01650 PF00009 Elongation factor Tu GTP binding domain ND445_01655 PF04324 BFD-like [2Fe-2S] binding domain ND445_01660 PF00210 Ferritin-like domain ND445_01665 PF00338 Ribosomal protein S10p/S20e ND445_01670 PF00297 Ribosomal protein L3 ND445_01675 PF00573 Ribosomal protein L4/L1 family ND445_01680 PF00276 Ribosomal protein L23 ND445_01685 PF00181 Ribosomal Proteins L2, RNA binding domain ND445_01685 PF03947 Ribosomal Proteins L2, C-terminal domain ND445_01690 PF00203 Ribosomal protein S19 ND445_01695 PF00237 Ribosomal protein L22p/L17e ND445_01700 PF07650 KH domain ND445_01700 PF00189 Ribosomal protein S3, C-terminal domain ND445_01705 PF00252 Ribosomal protein L16p/L10e ND445_01710 PF00831 Ribosomal L29 protein ND445_01715 PF00366 Ribosomal protein S17 ND445_01720 PF00238 Ribosomal protein L14p/L23e ND445_01725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND445_01725 PF00467 KOW motif ND445_01730 PF00673 ribosomal L5P family C-terminus ND445_01730 PF00281 Ribosomal protein L5 ND445_01735 PF00253 Ribosomal protein S14p/S29e ND445_01740 PF00410 Ribosomal protein S8 ND445_01745 PF00347 Ribosomal protein L6 ND445_01750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND445_01755 PF00333 Ribosomal protein S5, N-terminal domain ND445_01755 PF03719 Ribosomal protein S5, C-terminal domain ND445_01760 PF00327 Ribosomal protein L30p/L7e ND445_01765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND445_01770 PF00344 SecY translocase ND445_01775 PF00444 Ribosomal protein L36 ND445_01780 PF00416 Ribosomal protein S13/S18 ND445_01785 PF00411 Ribosomal protein S11 ND445_01790 PF00163 Ribosomal protein S4/S9 N-terminal domain ND445_01790 PF01479 S4 domain ND445_01795 PF01000 RNA polymerase Rpb3/RpoA insert domain ND445_01795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND445_01795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND445_01800 PF01196 Ribosomal protein L17 ND445_01805 PF13411 MerR HTH family regulatory protein ND445_01810 PF03889 Alternative ribosome-rescue factor A ND445_01815 PF01741 Large-conductance mechanosensitive channel, MscL ND445_01820 PF02254 TrkA-N domain ND445_01820 PF02080 TrkA-C domain ND445_01825 PF01029 NusB family ND445_01825 PF01189 16S rRNA methyltransferase RsmB/F ND445_01830 PF00551 Formyl transferase ND445_01830 PF02911 Formyl transferase, C-terminal domain ND445_01835 PF01327 Polypeptide deformylase ND445_01840 PF02481 DNA recombination-mediator protein A ND445_01840 PF17782 DprA winged helix domain ND445_01845 PF04361 Protein of unknown function (DUF494) ND445_01850 PF01396 Topoisomerase DNA binding C4 zinc finger ND445_01855 PF01300 Telomere recombination ND445_01860 PF08501 Shikimate dehydrogenase substrate binding domain ND445_01860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND445_01860 PF01488 Shikimate / quinate 5-dehydrogenase ND445_01865 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_01895 PF00474 Sodium:solute symporter family ND445_01900 PF04341 Protein of unknown function, DUF485 ND445_01905 PF16177 Acetyl-coenzyme A synthetase N-terminus ND445_01905 PF00501 AMP-binding enzyme ND445_01905 PF13193 AMP-binding enzyme C-terminal domain ND445_01910 PF00375 Sodium:dicarboxylate symporter family ND445_01920 PF04143 Sulphur transport ND445_01925 PF01206 Sulfurtransferase TusA ND445_01930 PF02719 Polysaccharide biosynthesis protein ND445_01935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND445_01940 PF02350 UDP-N-acetylglucosamine 2-epimerase ND445_01945 PF03102 NeuB family ND445_01945 PF08666 SAF domain ND445_01955 PF00483 Nucleotidyl transferase ND445_01965 PF02348 Cytidylyltransferase ND445_01965 PF13472 GDSL-like Lipase/Acylhydrolase family ND445_01990 PF00795 Carbon-nitrogen hydrolase ND445_01990 PF02540 NAD synthase ND445_01995 PF00117 Glutamine amidotransferase class-I ND445_02000 PF00977 Histidine biosynthesis protein ND445_02005 PF08485 Polysaccharide biosynthesis protein C-terminal ND445_02005 PF02719 Polysaccharide biosynthesis protein ND445_02010 PF01370 NAD dependent epimerase/dehydratase family ND445_02015 PF02350 UDP-N-acetylglucosamine 2-epimerase ND445_02040 PF11412 Disulphide bond corrector protein DsbC ND445_02040 PF02683 Cytochrome C biogenesis protein transmembrane region ND445_02045 PF03091 CutA1 divalent ion tolerance protein ND445_02050 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND445_02055 PF10415 Fumarase C C-terminus ND445_02055 PF00206 Lyase ND445_02060 PF04186 FxsA cytoplasmic membrane protein ND445_02065 PF00166 Chaperonin 10 Kd subunit ND445_02070 PF00118 TCP-1/cpn60 chaperonin family ND445_02075 PF13698 Domain of unknown function (DUF4156) ND445_02080 PF04055 Radical SAM superfamily ND445_02085 PF01132 Elongation factor P (EF-P) OB domain ND445_02085 PF08207 Elongation factor P (EF-P) KOW-like domain ND445_02085 PF09285 Elongation factor P, C-terminal ND445_02090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND445_02090 PF18416 N-acetylglucosamine binding protein domain 2 ND445_02095 PF00196 Bacterial regulatory proteins, luxR family ND445_02105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_02105 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_02110 PF13953 PapC C-terminal domain ND445_02110 PF13954 PapC N-terminal domain ND445_02110 PF00577 Outer membrane usher protein ND445_02115 PF00419 Fimbrial protein ND445_02120 PF00893 Small Multidrug Resistance protein ND445_02125 PF08212 Lipocalin-like domain ND445_02130 PF02313 Fumarate reductase subunit D ND445_02135 PF02300 Fumarate reductase subunit C ND445_02140 PF13183 4Fe-4S dicluster domain ND445_02140 PF13085 2Fe-2S iron-sulfur cluster binding domain ND445_02145 PF00890 FAD binding domain ND445_02145 PF02910 Fumarate reductase flavoprotein C-term ND445_02150 PF00152 tRNA synthetases class II (D, K and N) ND445_02155 PF00924 Mechanosensitive ion channel ND445_02155 PF12795 Mechanosensitive ion channel porin domain ND445_02155 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND445_02160 PF02666 Phosphatidylserine decarboxylase ND445_02165 PF03193 RsgA GTPase ND445_02170 PF00929 Exonuclease ND445_02190 PF08331 Domain of unknown function (DUF1730) ND445_02195 PF01256 Carbohydrate kinase ND445_02195 PF03853 YjeF-related protein N-terminus ND445_02200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND445_02205 PF01520 N-acetylmuramoyl-L-alanine amidase ND445_02210 PF01119 DNA mismatch repair protein, C-terminal domain ND445_02210 PF08676 MutL C terminal dimerisation domain ND445_02220 PF17209 Hfq protein ND445_02225 PF01926 50S ribosome-binding GTPase ND445_02225 PF13167 GTP-binding GTPase N-terminal ND445_02225 PF16360 GTP-binding GTPase Middle Region ND445_02230 PF01145 SPFH domain / Band 7 family ND445_02230 PF12221 Bacterial membrane protein N terminal ND445_02235 PF01145 SPFH domain / Band 7 family ND445_02240 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND445_02245 PF00709 Adenylosuccinate synthetase ND445_02250 PF02082 Transcriptional regulator ND445_02255 PF17876 Cold shock domain ND445_02255 PF00773 RNB domain ND445_02255 PF08206 Ribonuclease B OB domain ND445_02255 PF08461 Ribonuclease R winged-helix domain ND445_02255 PF00575 S1 RNA binding domain ND445_02260 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND445_02260 PF00588 SpoU rRNA Methylase family ND445_02280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_02285 PF13953 PapC C-terminal domain ND445_02285 PF13954 PapC N-terminal domain ND445_02285 PF00577 Outer membrane usher protein ND445_02305 PF00326 Prolyl oligopeptidase family ND445_02315 PF01250 Ribosomal protein S6 ND445_02320 PF00436 Single-strand binding protein family ND445_02325 PF01084 Ribosomal protein S18 ND445_02330 PF03948 Ribosomal protein L9, C-terminal domain ND445_02330 PF01281 Ribosomal protein L9, N-terminal domain ND445_02335 PF04225 Opacity-associated protein A LysM-like domain ND445_02335 PF08525 Opacity-associated protein A N-terminal motif ND445_02340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND445_02340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND445_02345 PF01814 Hemerythrin HHE cation binding domain ND445_02345 PF04405 Domain of Unknown function (DUF542) ND445_02350 PF00149 Calcineurin-like phosphoesterase ND445_02350 PF02872 5'-nucleotidase, C-terminal domain ND445_02355 PF00459 Inositol monophosphatase family ND445_02360 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND445_02365 PF06526 Protein of unknown function (DUF1107) ND445_02370 PF00571 CBS domain ND445_02370 PF03471 Transporter associated domain ND445_02370 PF01595 Cyclin M transmembrane N-terminal domain ND445_02375 PF01625 Peptide methionine sulfoxide reductase ND445_02380 PF01103 Surface antigen ND445_02380 PF07244 Surface antigen variable number repeat ND445_02380 PF17243 POTRA domain TamA domain 1 ND445_02385 PF04357 TamB, inner membrane protein subunit of TAM complex ND445_02390 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND445_02395 PF00719 Inorganic pyrophosphatase ND445_02400 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND445_02405 PF01225 Mur ligase family, catalytic domain ND445_02405 PF02875 Mur ligase family, glutamate ligase domain ND445_02405 PF08245 Mur ligase middle domain ND445_02410 PF01316 Arginine repressor, DNA binding domain ND445_02410 PF02863 Arginine repressor, C-terminal domain ND445_02415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND445_02415 PF00056 lactate/malate dehydrogenase, NAD binding domain ND445_02420 PF13693 Winged helix-turn-helix DNA-binding ND445_02435 PF00348 Polyprenyl synthetase ND445_02440 PF00829 Ribosomal prokaryotic L21 protein ND445_02445 PF01016 Ribosomal L27 protein ND445_02450 PF00892 EamA-like transporter family ND445_02455 PF01018 GTP1/OBG ND445_02455 PF01926 50S ribosome-binding GTPase ND445_02460 PF00672 HAMP domain ND445_02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_02460 PF00512 His Kinase A (phospho-acceptor) domain ND445_02465 PF00072 Response regulator receiver domain ND445_02465 PF00486 Transcriptional regulatory protein, C terminal ND445_02470 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND445_02475 PF03449 Transcription elongation factor, N-terminal ND445_02475 PF01272 Transcription elongation factor, GreA/GreB, C-term ND445_02480 PF01985 CRS1 / YhbY (CRM) domain ND445_02485 PF01728 FtsJ-like methyltransferase ND445_02490 PF17862 AAA+ lid domain ND445_02490 PF00004 ATPase family associated with various cellular activities (AAA) ND445_02490 PF06480 FtsH Extracellular ND445_02490 PF01434 Peptidase family M41 ND445_02495 PF00809 Pterin binding enzyme ND445_02500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND445_02500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND445_02500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND445_02500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND445_02505 PF03840 Preprotein translocase SecG subunit ND445_02520 PF02576 RimP N-terminal domain ND445_02520 PF17384 RimP C-terminal SH3 domain ND445_02525 PF08529 NusA N-terminal domain ND445_02525 PF00575 S1 RNA binding domain ND445_02525 PF13184 NusA-like KH domain ND445_02530 PF00009 Elongation factor Tu GTP binding domain ND445_02530 PF04760 Translation initiation factor IF-2, N-terminal region ND445_02530 PF03144 Elongation factor Tu domain 2 ND445_02530 PF11987 Translation-initiation factor 2 ND445_02530 PF08364 Bacterial translation initiation factor IF-2 associated region ND445_02535 PF02033 Ribosome-binding factor A ND445_02540 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND445_02540 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND445_02540 PF09157 Pseudouridine synthase II TruB, C-terminal ND445_02545 PF00312 Ribosomal protein S15 ND445_02550 PF00013 KH domain ND445_02550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND445_02550 PF01138 3' exoribonuclease family, domain 1 ND445_02550 PF03725 3' exoribonuclease family, domain 2 ND445_02550 PF00575 S1 RNA binding domain ND445_02555 PF07719 Tetratricopeptide repeat ND445_02555 PF13181 Tetratricopeptide repeat ND445_02560 PF00271 Helicase conserved C-terminal domain ND445_02560 PF12343 Cold shock protein DEAD box A ND445_02560 PF03880 DbpA RNA binding domain ND445_02560 PF00270 DEAD/DEAH box helicase ND445_02565 PF00296 Luciferase-like monooxygenase ND445_02575 PF03313 Serine dehydratase alpha chain ND445_02580 PF01136 Peptidase family U32 ND445_02585 PF01136 Peptidase family U32 ND445_02590 PF02036 SCP-2 sterol transfer family ND445_02595 PF13508 Acetyltransferase (GNAT) domain ND445_02600 PF01541 GIY-YIG catalytic domain ND445_02605 PF13520 Amino acid permease ND445_02610 PF01276 Orn/Lys/Arg decarboxylase, major domain ND445_02610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND445_02610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND445_02615 PF10940 Protein of unknown function (DUF2618) ND445_02625 PF13460 NAD(P)H-binding ND445_02630 PF12706 Beta-lactamase superfamily domain ND445_02640 PF07969 Amidohydrolase family ND445_02645 PF00005 ABC transporter ND445_02650 PF00005 ABC transporter ND445_02655 PF06007 Phosphonate metabolism protein PhnJ ND445_02660 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND445_02665 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND445_02670 PF06754 Phosphonate metabolism protein PhnG ND445_02680 PF03477 ATP cone domain ND445_02680 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND445_02685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND445_02685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND445_02690 PF06877 Regulator of ribonuclease activity B ND445_02695 PF00583 Acetyltransferase (GNAT) family ND445_02700 PF08264 Anticodon-binding domain of tRNA ND445_02700 PF00133 tRNA synthetases class I (I, L, M and V) ND445_02700 PF10458 Valyl tRNA synthetase tRNA binding arm ND445_02705 PF04364 DNA polymerase III chi subunit, HolC ND445_02710 PF00883 Cytosol aminopeptidase family, catalytic domain ND445_02710 PF02789 Cytosol aminopeptidase family, N-terminal domain ND445_02715 PF03739 Lipopolysaccharide export system permease LptF/LptG ND445_02720 PF03739 Lipopolysaccharide export system permease LptF/LptG ND445_02760 PF04221 RelB antitoxin ND445_02765 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ND445_02810 PF00892 EamA-like transporter family ND445_02855 PF01344 Kelch motif ND445_02860 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND445_02865 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND445_02865 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND445_02865 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ND445_02880 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND445_02880 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND445_02880 PF09093 Lyase, catalytic ND445_02880 PF09092 Lyase, N terminal ND445_02885 PF00884 Sulfatase ND445_02890 PF00455 DeoR C terminal sensor domain ND445_02890 PF08220 DeoR-like helix-turn-helix domain ND445_02895 PF08013 Tagatose 6 phosphate kinase ND445_02900 PF01380 SIS domain ND445_02905 PF03830 PTS system sorbose subfamily IIB component ND445_02910 PF03609 PTS system sorbose-specific iic component ND445_02915 PF03613 PTS system mannose/fructose/sorbose family IID component ND445_02925 PF01979 Amidohydrolase family ND445_02930 PF04962 KduI/IolB family ND445_02940 PF07470 Glycosyl Hydrolase Family 88 ND445_02945 PF04055 Radical SAM superfamily ND445_02945 PF13186 Iron-sulfur cluster-binding domain ND445_02950 PF00884 Sulfatase ND445_02960 PF01116 Fructose-bisphosphate aldolase class-II ND445_02970 PF10696 Protein of unknown function (DUF2501) ND445_02975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND445_02990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND445_02995 PF00873 AcrB/AcrD/AcrF family ND445_03000 PF00465 Iron-containing alcohol dehydrogenase ND445_03005 PF02733 Dak1 domain ND445_03010 PF02734 DAK2 domain ND445_03015 PF00381 PTS HPr component phosphorylation site ND445_03015 PF03610 PTS system fructose IIA component ND445_03015 PF05524 PEP-utilising enzyme, N-terminal ND445_03015 PF00391 PEP-utilising enzyme, mobile domain ND445_03020 PF00158 Sigma-54 interaction domain ND445_03020 PF02954 Bacterial regulatory protein, Fis family ND445_03020 PF00989 PAS fold ND445_03025 PF00990 Diguanylate cyclase, GGDEF domain ND445_03030 PF07256 Protein of unknown function (DUF1435) ND445_03050 PF05175 Methyltransferase small domain ND445_03050 PF08468 Methyltransferase small domain N-terminal ND445_03055 PF03603 DNA polymerase III psi subunit ND445_03060 PF00583 Acetyltransferase (GNAT) family ND445_03065 PF03144 Elongation factor Tu domain 2 ND445_03065 PF16658 Class II release factor RF3, C-terminal domain ND445_03065 PF00009 Elongation factor Tu GTP binding domain ND445_03070 PF04972 BON domain ND445_03075 PF07043 Protein of unknown function (DUF1328) ND445_03080 PF01734 Patatin-like phospholipase ND445_03085 PF01026 TatD related DNase ND445_03090 PF07670 Nucleoside recognition ND445_03090 PF07662 Na+ dependent nucleoside transporter C-terminus ND445_03090 PF01773 Na+ dependent nucleoside transporter N-terminus ND445_03095 PF01791 DeoC/LacD family aldolase ND445_03100 PF00591 Glycosyl transferase family, a/b domain ND445_03100 PF02885 Glycosyl transferase family, helical bundle domain ND445_03100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND445_03105 PF01676 Metalloenzyme superfamily ND445_03110 PF01048 Phosphorylase superfamily ND445_03115 PF10144 Bacterial virulence factor haemolysin ND445_03120 PF18429 Domain of unknown function (DUF5609) ND445_03125 PF18073 Rubredoxin metal binding domain ND445_03130 PF13521 AAA domain ND445_03130 PF01381 Helix-turn-helix ND445_03135 PF00005 ABC transporter ND445_03135 PF12848 ABC transporter ND445_03150 PF00690 Cation transporter/ATPase, N-terminus ND445_03150 PF00689 Cation transporting ATPase, C-terminus ND445_03160 PF01464 Transglycosylase SLT domain ND445_03160 PF14718 Soluble lytic murein transglycosylase L domain ND445_03165 PF01371 Trp repressor protein ND445_03170 PF01931 Protein of unknown function DUF84 ND445_03175 PF00300 Histidine phosphatase superfamily (branch 1) ND445_03180 PF06445 GyrI-like small molecule binding domain ND445_03180 PF12833 Helix-turn-helix domain ND445_03185 PF05981 CreA protein ND445_03190 PF00486 Transcriptional regulatory protein, C terminal ND445_03190 PF00072 Response regulator receiver domain ND445_03200 PF08254 Threonine leader peptide ND445_03205 PF00696 Amino acid kinase family ND445_03205 PF01842 ACT domain ND445_03205 PF13840 ACT domain ND445_03205 PF00742 Homoserine dehydrogenase ND445_03205 PF03447 Homoserine dehydrogenase, NAD binding domain ND445_03210 PF08544 GHMP kinases C terminal ND445_03210 PF00288 GHMP kinases N terminal domain ND445_03215 PF14821 Threonine synthase N terminus ND445_03215 PF00291 Pyridoxal-phosphate dependent enzyme ND445_03220 PF03883 Peroxide stress protein YaaA ND445_03225 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND445_03230 PF00994 Probable molybdopterin binding domain ND445_03235 PF07690 Major Facilitator Superfamily ND445_03245 PF01184 GPR1/FUN34/yaaH family ND445_03250 PF00012 Hsp70 protein ND445_03255 PF01556 DnaJ C terminal domain ND445_03255 PF00226 DnaJ domain ND445_03255 PF00684 DnaJ central domain ND445_03260 PF06965 Na+/H+ antiporter 1 ND445_03265 PF03466 LysR substrate binding domain ND445_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_03270 PF01649 Ribosomal protein S20 ND445_03275 PF06574 FAD synthetase ND445_03275 PF01687 Riboflavin kinase ND445_03280 PF00133 tRNA synthetases class I (I, L, M and V) ND445_03280 PF06827 Zinc finger found in FPG and IleRS ND445_03280 PF08264 Anticodon-binding domain of tRNA ND445_03285 PF01252 Signal peptidase (SPase) II ND445_03290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND445_03295 PF02401 LytB protein ND445_03300 PF05173 Dihydrodipicolinate reductase, C-terminus ND445_03300 PF01113 Dihydrodipicolinate reductase, N-terminus ND445_03305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND445_03305 PF00117 Glutamine amidotransferase class-I ND445_03310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND445_03310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND445_03310 PF02142 MGS-like domain ND445_03315 PF01810 LysE type translocator ND445_03320 PF06738 Putative threonine/serine exporter ND445_03325 PF12821 Threonine/Serine exporter, ThrE ND445_03330 PF00186 Dihydrofolate reductase ND445_03340 PF00149 Calcineurin-like phosphoesterase ND445_03345 PF04379 ApaG domain ND445_03350 PF00398 Ribosomal RNA adenine dimethylase ND445_03355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND445_03360 PF00639 PPIC-type PPIASE domain ND445_03360 PF09312 SurA N-terminal domain ND445_03365 PF03968 OstA-like protein ND445_03365 PF04453 LPS transport system D ND445_03370 PF05099 Tellurite resistance protein TerB ND445_03370 PF00226 DnaJ domain ND445_03375 PF00849 RNA pseudouridylate synthase ND445_03380 PF18339 RapA N-terminal Tudor like domain 1 ND445_03380 PF00176 SNF2 family N-terminal domain ND445_03380 PF12137 RNA polymerase recycling family C-terminal ND445_03380 PF18337 RapA N-terminal Tudor like domain ND445_03380 PF00271 Helicase conserved C-terminal domain ND445_03385 PF00136 DNA polymerase family B ND445_03385 PF03104 DNA polymerase family B, exonuclease domain ND445_03390 PF09335 SNARE associated Golgi protein ND445_03395 PF00005 ABC transporter ND445_03400 PF00528 Binding-protein-dependent transport system inner membrane component ND445_03410 PF12793 Sugar transport-related sRNA regulator N-term ND445_03410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_03420 PF07690 Major Facilitator Superfamily ND445_03425 PF00694 Aconitase C-terminal domain ND445_03430 PF00330 Aconitase family (aconitate hydratase) ND445_03435 PF00180 Isocitrate/isopropylmalate dehydrogenase ND445_03440 PF08502 LeuA allosteric (dimerisation) domain ND445_03440 PF00682 HMGL-like ND445_03445 PF03466 LysR substrate binding domain ND445_03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_03450 PF00501 AMP-binding enzyme ND445_03455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND445_03455 PF00205 Thiamine pyrophosphate enzyme, central domain ND445_03455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND445_03460 PF10369 Small subunit of acetolactate synthase ND445_03465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND445_03465 PF00356 Bacterial regulatory proteins, lacI family ND445_03470 PF06610 L-alanine exporter ND445_03475 PF02381 MraZ protein, putative antitoxin-like ND445_03480 PF01795 MraW methylase family ND445_03485 PF04999 Cell division protein FtsL ND445_03490 PF03717 Penicillin-binding Protein dimerisation domain ND445_03490 PF00905 Penicillin binding protein transpeptidase domain ND445_03495 PF08245 Mur ligase middle domain ND445_03495 PF02875 Mur ligase family, glutamate ligase domain ND445_03495 PF01225 Mur ligase family, catalytic domain ND445_03500 PF01225 Mur ligase family, catalytic domain ND445_03500 PF02875 Mur ligase family, glutamate ligase domain ND445_03500 PF08245 Mur ligase middle domain ND445_03505 PF00953 Glycosyl transferase family 4 ND445_03505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND445_03510 PF08245 Mur ligase middle domain ND445_03510 PF02875 Mur ligase family, glutamate ligase domain ND445_03515 PF01098 Cell cycle protein ND445_03520 PF03033 Glycosyltransferase family 28 N-terminal domain ND445_03520 PF04101 Glycosyltransferase family 28 C-terminal domain ND445_03525 PF08245 Mur ligase middle domain ND445_03525 PF01225 Mur ligase family, catalytic domain ND445_03525 PF02875 Mur ligase family, glutamate ligase domain ND445_03530 PF07478 D-ala D-ala ligase C-terminus ND445_03530 PF01820 D-ala D-ala ligase N-terminus ND445_03535 PF03799 Cell division protein FtsQ ND445_03535 PF08478 POTRA domain, FtsQ-type ND445_03540 PF02491 SHS2 domain inserted in FTSA ND445_03545 PF00091 Tubulin/FtsZ family, GTPase domain ND445_03545 PF12327 FtsZ family, C-terminal domain ND445_03550 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND445_03560 PF06558 Secretion monitor precursor protein (SecM) ND445_03565 PF02810 SEC-C motif ND445_03565 PF07517 SecA DEAD-like domain ND445_03565 PF01043 SecA preprotein cross-linking domain ND445_03565 PF07516 SecA Wing and Scaffold domain ND445_03570 PF00293 NUDIX domain ND445_03575 PF03884 DNA gyrase inhibitor YacG ND445_03580 PF07072 Cell division protein ND445_03585 PF01121 Dephospho-CoA kinase ND445_03590 PF00478 IMP dehydrogenase / GMP reductase domain ND445_03595 PF00482 Type II secretion system (T2SS), protein F ND445_03600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND445_03600 PF00437 Type II/IV secretion system protein ND445_03605 PF07963 Prokaryotic N-terminal methylation motif ND445_03610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND445_03610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND445_03615 PF01510 N-acetylmuramoyl-L-alanine amidase ND445_03620 PF17113 Regulatory signalling modulator protein AmpE ND445_03625 PF00324 Amino acid permease ND445_03630 PF07729 FCD domain ND445_03630 PF00392 Bacterial regulatory proteins, gntR family ND445_03635 PF17831 Pyruvate dehydrogenase E1 component middle domain ND445_03635 PF00456 Transketolase, thiamine diphosphate binding domain ND445_03640 PF00364 Biotin-requiring enzyme ND445_03640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND445_03640 PF02817 e3 binding domain ND445_03645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_03645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND445_03655 PF00330 Aconitase family (aconitate hydratase) ND445_03655 PF06434 Aconitate hydratase 2 N-terminus ND445_03655 PF11791 Aconitate B N-terminal domain ND445_03660 PF06062 Uncharacterised protein family (UPF0231) ND445_03665 PF00892 EamA-like transporter family ND445_03670 PF02675 S-adenosylmethionine decarboxylase ND445_03675 PF17284 Spermidine synthase tetramerisation domain ND445_03680 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND445_03685 PF00394 Multicopper oxidase ND445_03685 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND445_03685 PF07731 Multicopper oxidase ND445_03685 PF07732 Multicopper oxidase ND445_03690 PF00156 Phosphoribosyl transferase domain ND445_03695 PF00484 Carbonic anhydrase ND445_03700 PF00005 ABC transporter ND445_03705 PF01061 ABC-2 type transporter ND445_03710 PF01522 Polysaccharide deacetylase ND445_03715 PF02261 Aspartate decarboxylase ND445_03720 PF02569 Pantoate-beta-alanine ligase ND445_03725 PF02548 Ketopantoate hydroxymethyltransferase ND445_03730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND445_03735 PF12627 Probable RNA and SrmB- binding site of polymerase A ND445_03735 PF01743 Poly A polymerase head domain ND445_03735 PF12626 Polymerase A arginine-rich C-terminus ND445_03740 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND445_03745 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND445_03750 PF17746 SfsA N-terminal OB domain ND445_03750 PF03749 Sugar fermentation stimulation protein RE domain ND445_03755 PF02834 LigT like Phosphoesterase ND445_03760 PF00271 Helicase conserved C-terminal domain ND445_03760 PF04408 Helicase associated domain (HA2) ND445_03760 PF08482 ATP-dependent helicase C-terminal ND445_03760 PF00270 DEAD/DEAH box helicase ND445_03765 PF00912 Transglycosylase ND445_03765 PF14814 Bifunctional transglycosylase second domain ND445_03765 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND445_03765 PF00905 Penicillin binding protein transpeptidase domain ND445_03770 PF00202 Aminotransferase class-III ND445_03775 PF00654 Voltage gated chloride channel ND445_03780 PF01521 Iron-sulphur cluster biosynthesis ND445_03785 PF03458 UPF0126 domain ND445_03790 PF01497 Periplasmic binding protein ND445_03795 PF01048 Phosphorylase superfamily ND445_03800 PF01966 HD domain ND445_03800 PF13286 Phosphohydrolase-associated domain ND445_03805 PF00595 PDZ domain ND445_03810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND445_03810 PF00072 Response regulator receiver domain ND445_03810 PF01627 Hpt domain ND445_03810 PF00512 His Kinase A (phospho-acceptor) domain ND445_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_03810 PF00672 HAMP domain ND445_03815 PF05958 tRNA (Uracil-5-)-methyltransferase ND445_03815 PF01938 TRAM domain ND445_03820 PF02824 TGS domain ND445_03820 PF13291 ACT domain ND445_03820 PF04607 Region found in RelA / SpoT proteins ND445_03825 PF03819 MazG nucleotide pyrophosphohydrolase domain ND445_03830 PF06418 CTP synthase N-terminus ND445_03830 PF00117 Glutamine amidotransferase class-I ND445_03835 PF00113 Enolase, C-terminal TIM barrel domain ND445_03835 PF03952 Enolase, N-terminal domain ND445_03840 PF04055 Radical SAM superfamily ND445_03845 PF01242 6-pyruvoyl tetrahydropterin synthase ND445_03850 PF00258 Flavodoxin ND445_03850 PF00667 FAD binding domain ND445_03850 PF00175 Oxidoreductase NAD-binding domain ND445_03855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND445_03855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND445_03860 PF01507 Phosphoadenosine phosphosulfate reductase family ND445_03875 PF04389 Peptidase family M28 ND445_03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND445_03880 PF14824 Sirohaem biosynthesis protein central ND445_03880 PF10414 Sirohaem synthase dimerisation region ND445_03885 PF01507 Phosphoadenosine phosphosulfate reductase family ND445_03890 PF00009 Elongation factor Tu GTP binding domain ND445_03900 PF12084 Protein of unknown function (DUF3561) ND445_03905 PF04977 Septum formation initiator ND445_03910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND445_03915 PF02542 YgbB family ND445_03920 PF01142 tRNA pseudouridine synthase D (TruD) ND445_03925 PF01975 Survival protein SurE ND445_03935 PF01551 Peptidase family M23 ND445_03935 PF01476 LysM domain ND445_03940 PF04539 Sigma-70 region 3 ND445_03940 PF04542 Sigma-70 region 2 ND445_03940 PF00140 Sigma-70 factor, region 1.2 ND445_03940 PF04545 Sigma-70, region 4 ND445_03945 PF01624 MutS domain I ND445_03945 PF05188 MutS domain II ND445_03945 PF05192 MutS domain III ND445_03945 PF00488 MutS domain V ND445_03945 PF05190 MutS family domain IV ND445_03980 PF00550 Phosphopantetheine attachment site ND445_03980 PF00668 Condensation domain ND445_03980 PF13193 AMP-binding enzyme C-terminal domain ND445_03980 PF00501 AMP-binding enzyme ND445_04015 PF00512 His Kinase A (phospho-acceptor) domain ND445_04015 PF09308 LuxQ, periplasmic ND445_04015 PF00072 Response regulator receiver domain ND445_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_04020 PF00072 Response regulator receiver domain ND445_04020 PF00196 Bacterial regulatory proteins, luxR family ND445_04035 PF01464 Transglycosylase SLT domain ND445_04055 PF01514 Secretory protein of YscJ/FliF family ND445_04075 PF12833 Helix-turn-helix domain ND445_04080 PF00263 Bacterial type II and III secretion system protein ND445_04080 PF03958 Bacterial type II/III secretion system short domain ND445_04085 PF07201 HrpJ-like domain ND445_04090 PF00771 FHIPEP family ND445_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND445_04100 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND445_04100 PF18269 T3SS EscN ATPase C-terminal domain ND445_04115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND445_04120 PF00813 FliP family ND445_04125 PF01313 Bacterial export proteins, family 3 ND445_04130 PF01311 Bacterial export proteins, family 1 ND445_04135 PF01312 FlhB HrpN YscU SpaS Family ND445_04140 PF07720 Tetratricopeptide repeat ND445_04165 PF00550 Phosphopantetheine attachment site ND445_04185 PF18416 N-acetylglucosamine binding protein domain 2 ND445_04185 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND445_04190 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND445_04195 PF06750 Bacterial Peptidase A24 N-terminal domain ND445_04195 PF01478 Type IV leader peptidase family ND445_04205 PF12693 GspL periplasmic domain ND445_04205 PF05134 Type II secretion system (T2SS), protein L ND445_04210 PF03934 Type II secretion system (T2SS), protein K ND445_04215 PF11612 Type II secretion system (T2SS), protein J ND445_04215 PF07963 Prokaryotic N-terminal methylation motif ND445_04220 PF07963 Prokaryotic N-terminal methylation motif ND445_04220 PF02501 Type II secretion system (T2SS), protein I ND445_04230 PF07963 Prokaryotic N-terminal methylation motif ND445_04230 PF08334 Type II secretion system (T2SS), protein G ND445_04235 PF00482 Type II secretion system (T2SS), protein F ND445_04240 PF00437 Type II/IV secretion system protein ND445_04245 PF00263 Bacterial type II and III secretion system protein ND445_04245 PF03958 Bacterial type II/III secretion system short domain ND445_04250 PF11356 Type II secretion system protein C ND445_04275 PF05683 Fumarase C-terminus ND445_04275 PF05681 Fumarate hydratase (Fumerase) ND445_04280 PF07690 Major Facilitator Superfamily ND445_04285 PF02464 Competence-damaged protein ND445_04290 PF00154 recA bacterial DNA recombination protein ND445_04295 PF02631 RecX family ND445_04300 PF02272 DHHA1 domain ND445_04300 PF01411 tRNA synthetases class II (A) ND445_04300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND445_04305 PF02599 Global regulator protein family ND445_04335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND445_04335 PF01411 tRNA synthetases class II (A) ND445_04340 PF01411 tRNA synthetases class II (A) ND445_04340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND445_04345 PF13419 Haloacid dehalogenase-like hydrolase ND445_04350 PF09335 SNARE associated Golgi protein ND445_04355 PF04262 Glutamate-cysteine ligase ND445_04360 PF02664 S-Ribosylhomocysteinase (LuxS) ND445_04365 PF00571 CBS domain ND445_04365 PF03471 Transporter associated domain ND445_04365 PF01595 Cyclin M transmembrane N-terminal domain ND445_04370 PF01578 Cytochrome C assembly protein ND445_04375 PF02881 SRP54-type protein, helical bundle domain ND445_04375 PF02978 Signal peptide binding domain ND445_04375 PF00448 SRP54-type protein, GTPase domain ND445_04380 PF00886 Ribosomal protein S16 ND445_04385 PF05239 PRC-barrel domain ND445_04385 PF01782 RimM N-terminal domain ND445_04390 PF01746 tRNA (Guanine-1)-methyltransferase ND445_04395 PF01245 Ribosomal protein L19 ND445_04400 PF04338 Protein of unknown function, DUF481 ND445_04405 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND445_04410 PF04397 LytTr DNA-binding domain ND445_04410 PF00072 Response regulator receiver domain ND445_04415 PF00793 DAHP synthetase I family ND445_04420 PF01817 Chorismate mutase type II ND445_04420 PF02153 Prephenate dehydrogenase ND445_04425 PF01817 Chorismate mutase type II ND445_04425 PF00800 Prephenate dehydratase ND445_04435 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND445_04440 PF13525 Outer membrane lipoprotein ND445_04445 PF00849 RNA pseudouridylate synthase ND445_04445 PF01479 S4 domain ND445_04450 PF02578 Multi-copper polyphenol oxidoreductase laccase ND445_04455 PF00004 ATPase family associated with various cellular activities (AAA) ND445_04455 PF07724 AAA domain (Cdc48 subfamily) ND445_04455 PF17871 AAA lid domain ND445_04455 PF02861 Clp amino terminal domain, pathogenicity island component ND445_04455 PF10431 C-terminal, D2-small domain, of ClpB protein ND445_04490 PF03372 Endonuclease/Exonuclease/phosphatase family ND445_04495 PF01464 Transglycosylase SLT domain ND445_04495 PF01476 LysM domain ND445_04500 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND445_04500 PF00753 Metallo-beta-lactamase superfamily ND445_04505 PF08241 Methyltransferase domain ND445_04510 PF00075 RNase H ND445_04515 PF00929 Exonuclease ND445_04525 PF09317 Domain of unknown function (DUF1974) ND445_04525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND445_04525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND445_04530 PF13580 SIS domain ND445_04535 PF13230 Glutamine amidotransferases class-II ND445_04540 PF03734 L,D-transpeptidase catalytic domain ND445_04545 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ND445_04545 PF11973 NQRA C-terminal domain ND445_04550 PF03116 NQR2, RnfD, RnfE family ND445_04555 PF04205 FMN-binding domain ND445_04560 PF02508 Rnf-Nqr subunit, membrane protein ND445_04565 PF02508 Rnf-Nqr subunit, membrane protein ND445_04570 PF00175 Oxidoreductase NAD-binding domain ND445_04570 PF00111 2Fe-2S iron-sulfur cluster binding domain ND445_04570 PF00970 Oxidoreductase FAD-binding domain ND445_04575 PF02424 ApbE family ND445_04580 PF04400 (Na+)-NQR maturation NqrM ND445_04585 PF03009 Glycerophosphoryl diester phosphodiesterase family ND445_04590 PF11799 impB/mucB/samB family C-terminal domain ND445_04590 PF11798 IMS family HHH motif ND445_04590 PF00817 impB/mucB/samB family ND445_04595 PF01546 Peptidase family M20/M25/M40 ND445_04595 PF07687 Peptidase dimerisation domain ND445_04600 PF00156 Phosphoribosyl transferase domain ND445_04605 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND445_04610 PF07417 Sigma factor-binding transcriptional regulator Crl ND445_04615 PF01472 PUA domain ND445_04615 PF00696 Amino acid kinase family ND445_04620 PF00171 Aldehyde dehydrogenase family ND445_04625 PF07238 PilZ domain ND445_04625 PF07317 Flagellar regulator YcgR ND445_04650 PF07715 TonB-dependent Receptor Plug Domain ND445_04650 PF00593 TonB dependent receptor ND445_04655 PF01202 Shikimate kinase ND445_04675 PF07302 AroM protein ND445_04680 PF06865 Pyrimidine/purine nucleoside phosphorylase ND445_04685 PF04381 Putative exonuclease, RdgC ND445_04690 PF00480 ROK family ND445_04695 PF13476 AAA domain ND445_04700 PF00149 Calcineurin-like phosphoesterase ND445_04700 PF12320 Type 5 capsule protein repressor C-terminal domain ND445_04705 PF00072 Response regulator receiver domain ND445_04705 PF00486 Transcriptional regulatory protein, C terminal ND445_04710 PF00989 PAS fold ND445_04710 PF00512 His Kinase A (phospho-acceptor) domain ND445_04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_04710 PF11808 Phosphate regulon sensor protein PhoR ND445_04715 PF12849 PBP superfamily domain ND445_04720 PF05525 Branched-chain amino acid transport protein ND445_04725 PF00324 Amino acid permease ND445_04730 PF00128 Alpha amylase, catalytic domain ND445_04730 PF02903 Alpha amylase, N-terminal ig-like domain ND445_04740 PF00578 AhpC/TSA family ND445_04740 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND445_04745 PF04336 Acyl carrier protein phosphodiesterase ND445_04750 PF02547 Queuosine biosynthesis protein ND445_04755 PF01702 Queuine tRNA-ribosyltransferase ND445_04760 PF02699 Preprotein translocase subunit ND445_04765 PF07549 SecD/SecF GG Motif ND445_04765 PF13721 SecD export protein N-terminal TM region ND445_04765 PF02355 Protein export membrane protein ND445_04770 PF07549 SecD/SecF GG Motif ND445_04770 PF02355 Protein export membrane protein ND445_04775 PF03477 ATP cone domain ND445_04780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND445_04780 PF01872 RibD C-terminal domain ND445_04785 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND445_04790 PF01029 NusB family ND445_04795 PF00586 AIR synthase related protein, N-terminal domain ND445_04795 PF02769 AIR synthase related protein, C-terminal domain ND445_04800 PF04608 Phosphatidylglycerophosphatase A ND445_04805 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND445_04805 PF02779 Transketolase, pyrimidine binding domain ND445_04805 PF02780 Transketolase, C-terminal domain ND445_04810 PF00348 Polyprenyl synthetase ND445_04815 PF02609 Exonuclease VII small subunit ND445_04820 PF02568 Thiamine biosynthesis protein (ThiI) ND445_04820 PF02926 THUMP domain ND445_04825 PF02954 Bacterial regulatory protein, Fis family ND445_04825 PF00072 Response regulator receiver domain ND445_04825 PF14532 Sigma-54 interaction domain ND445_04830 PF00672 HAMP domain ND445_04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_04830 PF00512 His Kinase A (phospho-acceptor) domain ND445_04840 PF07690 Major Facilitator Superfamily ND445_04845 PF01965 DJ-1/PfpI family ND445_04850 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND445_04850 PF02558 Ketopantoate reductase PanE/ApbA ND445_04855 PF04461 Protein of unknown function (DUF520) ND445_04860 PF07690 Major Facilitator Superfamily ND445_04865 PF01040 UbiA prenyltransferase family ND445_04870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND445_04875 PF00510 Cytochrome c oxidase subunit III ND445_04880 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND445_04885 PF06481 COX Aromatic Rich Motif ND445_04885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND445_04890 PF03502 Nucleoside-specific channel-forming protein, Tsx ND445_04895 PF07690 Major Facilitator Superfamily ND445_04900 PF03923 Uncharacterized lipoprotein ND445_04900 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND445_04905 PF01722 BolA-like protein ND445_04910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND445_04910 PF05698 Bacterial trigger factor protein (TF) C-terminus ND445_04910 PF05697 Bacterial trigger factor protein (TF) ND445_04915 PF00574 Clp protease ND445_04920 PF10431 C-terminal, D2-small domain, of ClpB protein ND445_04920 PF07724 AAA domain (Cdc48 subfamily) ND445_04920 PF06689 ClpX C4-type zinc finger ND445_04925 PF05362 Lon protease (S16) C-terminal proteolytic domain ND445_04925 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND445_04925 PF00004 ATPase family associated with various cellular activities (AAA) ND445_04930 PF00216 Bacterial DNA-binding protein ND445_04935 PF13145 PPIC-type PPIASE domain ND445_04950 PF06508 Queuosine biosynthesis protein QueC ND445_04955 PF12793 Sugar transport-related sRNA regulator N-term ND445_04955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_04970 PF13404 AsnC-type helix-turn-helix domain ND445_04970 PF01037 Lrp/AsnC ligand binding domain ND445_04975 PF00005 ABC transporter ND445_04975 PF00664 ABC transporter transmembrane region ND445_04980 PF00005 ABC transporter ND445_04980 PF00664 ABC transporter transmembrane region ND445_04985 PF00543 Nitrogen regulatory protein P-II ND445_04990 PF00909 Ammonium Transporter Family ND445_05000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND445_05010 PF05321 Haemolysin expression modulating protein ND445_05015 PF10757 Biofilm formation regulator YbaJ ND445_05025 PF00444 Ribosomal protein L36 ND445_05030 PF01197 Ribosomal protein L31 ND445_05035 PF00873 AcrB/AcrD/AcrF family ND445_05040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND445_05040 PF00529 HlyD membrane-fusion protein of T1SS ND445_05045 PF00440 Bacterial regulatory proteins, tetR family ND445_05045 PF08361 MAATS-type transcriptional repressor, C-terminal region ND445_05050 PF02635 DsrE/DsrF-like family ND445_05055 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND445_05055 PF00924 Mechanosensitive ion channel ND445_05055 PF12795 Mechanosensitive ion channel porin domain ND445_05060 PF10689 Protein of unknown function (DUF2496) ND445_05070 PF04304 Protein of unknown function (DUF454) ND445_05075 PF00156 Phosphoribosyl transferase domain ND445_05080 PF01970 Tripartite tricarboxylate transporter TctA family ND445_05095 PF00486 Transcriptional regulatory protein, C terminal ND445_05095 PF00072 Response regulator receiver domain ND445_05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_05100 PF00512 His Kinase A (phospho-acceptor) domain ND445_05105 PF12169 DNA polymerase III subunits gamma and tau domain III ND445_05105 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND445_05105 PF12170 DNA polymerase III tau subunit V interacting with alpha ND445_05110 PF02575 YbaB/EbfC DNA-binding family ND445_05115 PF02132 RecR protein ND445_05115 PF13662 Toprim domain ND445_05120 PF00183 Hsp90 protein ND445_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_05125 PF05191 Adenylate kinase, active site lid ND445_05130 PF00762 Ferrochelatase ND445_05135 PF02706 Chain length determinant protein ND445_05140 PF00294 pfkB family carbohydrate kinase ND445_05145 PF02254 TrkA-N domain ND445_05145 PF00999 Sodium/hydrogen exchanger family ND445_05150 PF00149 Calcineurin-like phosphoesterase ND445_05150 PF02872 5'-nucleotidase, C-terminal domain ND445_05155 PF04073 Aminoacyl-tRNA editing domain ND445_05160 PF01963 TraB family ND445_05165 PF00403 Heavy-metal-associated domain ND445_05170 PF13411 MerR HTH family regulatory protein ND445_05175 PF01957 NfeD-like C-terminal, partner-binding ND445_05180 PF01145 SPFH domain / Band 7 family ND445_05180 PF16200 C-terminal region of band_7 ND445_05185 PF00085 Thioredoxin ND445_05190 PF00106 short chain dehydrogenase ND445_05195 PF13472 GDSL-like Lipase/Acylhydrolase family ND445_05200 PF00005 ABC transporter ND445_05210 PF02222 ATP-grasp domain ND445_05210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND445_05215 PF00731 AIR carboxylase ND445_05220 PF00149 Calcineurin-like phosphoesterase ND445_05225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND445_05230 PF09190 DALR domain ND445_05230 PF01406 tRNA synthetases class I (C) catalytic domain ND445_05245 PF00419 Fimbrial protein ND445_05250 PF00577 Outer membrane usher protein ND445_05250 PF13953 PapC C-terminal domain ND445_05250 PF13954 PapC N-terminal domain ND445_05255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_05255 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_05290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND445_05290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND445_05300 PF01022 Bacterial regulatory protein, arsR family ND445_05305 PF02040 Arsenical pump membrane protein ND445_05310 PF03960 ArsC family ND445_05320 PF00501 AMP-binding enzyme ND445_05345 PF01292 Prokaryotic cytochrome b561 ND445_05355 PF00343 Carbohydrate phosphorylase ND445_05365 PF00072 Response regulator receiver domain ND445_05365 PF00486 Transcriptional regulatory protein, C terminal ND445_05375 PF00483 Nucleotidyl transferase ND445_05385 PF03552 Cellulose synthase ND445_05385 PF00535 Glycosyl transferase family 2 ND445_05385 PF07238 PilZ domain ND445_05405 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND445_05405 PF16355 Domain of unknown function (DUF4982) ND445_05405 PF00703 Glycosyl hydrolases family 2 ND445_05405 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND445_05410 PF00672 HAMP domain ND445_05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_05410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND445_05410 PF00072 Response regulator receiver domain ND445_05410 PF01627 Hpt domain ND445_05410 PF00512 His Kinase A (phospho-acceptor) domain ND445_05415 PF00990 Diguanylate cyclase, GGDEF domain ND445_05415 PF00072 Response regulator receiver domain ND445_05420 PF00440 Bacterial regulatory proteins, tetR family ND445_05450 PF00196 Bacterial regulatory proteins, luxR family ND445_05455 PF00313 'Cold-shock' DNA-binding domain ND445_05460 PF00313 'Cold-shock' DNA-binding domain ND445_05465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND445_05475 PF05230 MASE2 domain ND445_05475 PF00990 Diguanylate cyclase, GGDEF domain ND445_05480 PF02416 mttA/Hcf106 family ND445_05485 PF04055 Radical SAM superfamily ND445_05485 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND445_05490 PF03099 Biotin/lipoate A/B protein ligase family ND445_05495 PF04359 Protein of unknown function (DUF493) ND445_05500 PF07943 Penicillin-binding protein 5, C-terminal domain ND445_05500 PF00768 D-alanyl-D-alanine carboxypeptidase ND445_05505 PF03330 Lytic transglycolase ND445_05505 PF05036 Sporulation related domain ND445_05510 PF01098 Cell cycle protein ND445_05515 PF00905 Penicillin binding protein transpeptidase domain ND445_05515 PF03717 Penicillin-binding Protein dimerisation domain ND445_05520 PF02590 Predicted SPOUT methyltransferase ND445_05530 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ND445_05530 PF00589 Phage integrase family ND445_05590 PF00929 Exonuclease ND445_05655 PF03796 DnaB-like helicase C terminal domain ND445_05655 PF00772 DnaB-like helicase N terminal domain ND445_05680 PF00149 Calcineurin-like phosphoesterase ND445_05715 PF03245 Bacteriophage Rz lysis protein ND445_05755 PF01343 Peptidase family S49 ND445_05795 PF04984 Phage tail sheath protein subtilisin-like domain ND445_05795 PF17482 Phage tail sheath C-terminal domain ND445_05835 PF04865 Baseplate J-like protein ND445_05850 PF08400 Prophage tail fibre N-terminal ND445_05850 PF07484 Phage Tail Collar Domain ND445_05850 PF03335 Phage tail fibre repeat ND445_05855 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND445_05860 PF01467 Cytidylyltransferase-like ND445_05865 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND445_05865 PF06144 DNA polymerase III, delta subunit ND445_05870 PF04390 Lipopolysaccharide-assembly ND445_05875 PF08264 Anticodon-binding domain of tRNA ND445_05875 PF00133 tRNA synthetases class I (I, L, M and V) ND445_05875 PF13603 Leucyl-tRNA synthetase, Domain 2 ND445_05880 PF07295 Zinc-ribbon containing domain ND445_05885 PF00005 ABC transporter ND445_05890 PF00528 Binding-protein-dependent transport system inner membrane component ND445_05895 PF00528 Binding-protein-dependent transport system inner membrane component ND445_05900 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_05905 PF00795 Carbon-nitrogen hydrolase ND445_05910 PF00571 CBS domain ND445_05910 PF03471 Transporter associated domain ND445_05915 PF02130 Uncharacterized protein family UPF0054 ND445_05920 PF02562 PhoH-like protein ND445_05925 PF04055 Radical SAM superfamily ND445_05925 PF01938 TRAM domain ND445_05925 PF00919 Uncharacterized protein family UPF0004 ND445_05930 PF01494 FAD binding domain ND445_05965 PF00733 Asparagine synthase ND445_05965 PF13537 Glutamine amidotransferase domain ND445_05970 PF13344 Haloacid dehalogenase-like hydrolase ND445_05975 PF00480 ROK family ND445_05975 PF01047 MarR family ND445_05980 PF01979 Amidohydrolase family ND445_05985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND445_05990 PF00367 phosphotransferase system, EIIB ND445_05990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND445_05990 PF02378 Phosphotransferase system, EIIC ND445_05995 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND445_05995 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND445_06000 PF03573 outer membrane porin, OprD family ND445_06005 PF13982 YbfN-like lipoprotein ND445_06010 PF03173 Putative carbohydrate binding domain ND445_06010 PF02838 Glycosyl hydrolase family 20, domain 2 ND445_06010 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ND445_06010 PF00728 Glycosyl hydrolase family 20, catalytic domain ND445_06015 PF01475 Ferric uptake regulator family ND445_06020 PF00258 Flavodoxin ND445_06025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_06025 PF02203 Tar ligand binding domain homologue ND445_06025 PF00672 HAMP domain ND445_06030 PF01402 Ribbon-helix-helix protein, copG family ND445_06035 PF12697 Alpha/beta hydrolase family ND445_06040 PF03925 SeqA protein C-terminal domain ND445_06040 PF17206 SeqA protein N-terminal domain ND445_06045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND445_06045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND445_06045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND445_06045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND445_06055 PF00072 Response regulator receiver domain ND445_06055 PF00486 Transcriptional regulatory protein, C terminal ND445_06060 PF02702 Osmosensitive K+ channel His kinase sensor domain ND445_06060 PF13492 GAF domain ND445_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_06060 PF00512 His Kinase A (phospho-acceptor) domain ND445_06060 PF13493 Domain of unknown function (DUF4118) ND445_06065 PF02669 K+-transporting ATPase, c chain ND445_06075 PF03814 Potassium-transporting ATPase A subunit ND445_06080 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND445_06085 PF10725 Protein of unknown function (DUF2517) ND445_06090 PF08349 Protein of unknown function (DUF1722) ND445_06095 PF03441 FAD binding domain of DNA photolyase ND445_06095 PF00875 DNA photolyase ND445_06100 PF02112 cAMP phosphodiesterases class-II ND445_06105 PF01784 NIF3 (NGG1p interacting factor 3) ND445_06110 PF02682 Carboxyltransferase domain, subdomain C and D ND445_06115 PF02626 Carboxyltransferase domain, subdomain A and B ND445_06120 PF03746 LamB/YcsF family ND445_06135 PF01470 Pyroglutamyl peptidase ND445_06145 PF00285 Citrate synthase, C-terminal domain ND445_06150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND445_06155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND445_06160 PF00890 FAD binding domain ND445_06160 PF02910 Fumarate reductase flavoprotein C-term ND445_06165 PF13085 2Fe-2S iron-sulfur cluster binding domain ND445_06170 PF16870 2-oxoglutarate dehydrogenase C-terminal ND445_06170 PF02779 Transketolase, pyrimidine binding domain ND445_06170 PF16078 2-oxoglutarate dehydrogenase N-terminus ND445_06170 PF00676 Dehydrogenase E1 component ND445_06175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND445_06175 PF00364 Biotin-requiring enzyme ND445_06175 PF02817 e3 binding domain ND445_06180 PF08442 ATP-grasp domain ND445_06180 PF00549 CoA-ligase ND445_06185 PF02629 CoA binding domain ND445_06185 PF00549 CoA-ligase ND445_06190 PF00149 Calcineurin-like phosphoesterase ND445_06190 PF02872 5'-nucleotidase, C-terminal domain ND445_06195 PF01654 Cytochrome bd terminal oxidase subunit I ND445_06200 PF02322 Cytochrome bd terminal oxidase subunit II ND445_06205 PF08173 Membrane bound YbgT-like protein ND445_06210 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND445_06215 PF03061 Thioesterase superfamily ND445_06220 PF01618 MotA/TolQ/ExbB proton channel family ND445_06225 PF02472 Biopolymer transport protein ExbD/TolR ND445_06230 PF06519 TolA C-terminal ND445_06230 PF06519 TolA C-terminal ND445_06235 PF04052 TolB amino-terminal domain ND445_06235 PF07676 WD40-like Beta Propeller Repeat ND445_06240 PF00691 OmpA family ND445_06245 PF16331 TolA binding protein trimerisation ND445_06245 PF13174 Tetratricopeptide repeat ND445_06285 PF02445 Quinolinate synthetase A protein ND445_06290 PF04973 Nicotinamide mononucleotide transporter ND445_06295 PF00512 His Kinase A (phospho-acceptor) domain ND445_06295 PF01627 Hpt domain ND445_06295 PF00989 PAS fold ND445_06295 PF00072 Response regulator receiver domain ND445_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_06295 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_06300 PF00196 Bacterial regulatory proteins, luxR family ND445_06300 PF00072 Response regulator receiver domain ND445_06305 PF00793 DAHP synthetase I family ND445_06310 PF00300 Histidine phosphatase superfamily (branch 1) ND445_06320 PF01263 Aldose 1-epimerase ND445_06325 PF08544 GHMP kinases C terminal ND445_06325 PF00288 GHMP kinases N terminal domain ND445_06325 PF10509 Galactokinase galactose-binding signature ND445_06330 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND445_06330 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND445_06335 PF16363 GDP-mannose 4,6 dehydratase ND445_06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_06350 PF03459 TOBE domain ND445_06355 PF10766 Multidrug efflux pump-associated protein AcrZ ND445_06365 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06370 PF00005 ABC transporter ND445_06370 PF03459 TOBE domain ND445_06380 PF10282 Lactonase, 7-bladed beta-propeller ND445_06385 PF00202 Aminotransferase class-III ND445_06390 PF06968 Biotin and Thiamin Synthesis associated domain ND445_06390 PF04055 Radical SAM superfamily ND445_06395 PF00155 Aminotransferase class I and II ND445_06400 PF08241 Methyltransferase domain ND445_06410 PF00005 ABC transporter ND445_06415 PF00271 Helicase conserved C-terminal domain ND445_06415 PF04851 Type III restriction enzyme, res subunit ND445_06415 PF02151 UvrB/uvrC motif ND445_06415 PF12344 Ultra-violet resistance protein B ND445_06415 PF17757 UvrB interaction domain ND445_06420 PF09905 DNA-binding protein VF530 ND445_06435 PF01032 FecCD transport family ND445_06440 PF00005 ABC transporter ND445_06445 PF01933 Uncharacterised protein family UPF0052 ND445_06450 PF04055 Radical SAM superfamily ND445_06450 PF06463 Molybdenum Cofactor Synthesis C ND445_06455 PF01967 MoaC family ND445_06460 PF02597 ThiS family ND445_06465 PF02391 MoaE protein ND445_06470 PF01027 Inhibitor of apoptosis-promoting Bax1 ND445_06485 PF00005 ABC transporter ND445_06490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND445_06495 PF09209 Tetracyclin repressor-like, C-terminal domain ND445_06495 PF00440 Bacterial regulatory proteins, tetR family ND445_06500 PF00270 DEAD/DEAH box helicase ND445_06500 PF00271 Helicase conserved C-terminal domain ND445_06505 PF01207 Dihydrouridine synthase (Dus) ND445_06515 PF00768 D-alanyl-D-alanine carboxypeptidase ND445_06520 PF01565 FAD binding domain ND445_06520 PF09330 D-lactate dehydrogenase, membrane binding ND445_06525 PF01928 CYTH domain ND445_06530 PF01844 HNH endonuclease ND445_06540 PF04226 Transglycosylase associated protein ND445_06545 PF00005 ABC transporter ND445_06555 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06560 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06565 PF07308 Protein of unknown function (DUF1456) ND445_06570 PF00581 Rhodanese-like domain ND445_06575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND445_06580 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06585 PF00005 ABC transporter ND445_06590 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06595 PF13520 Amino acid permease ND445_06600 PF01276 Orn/Lys/Arg decarboxylase, major domain ND445_06600 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND445_06600 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND445_06610 PF00892 EamA-like transporter family ND445_06615 PF00267 Gram-negative porin ND445_06620 PF13307 Helicase C-terminal domain ND445_06620 PF06733 DEAD_2 ND445_06625 PF02885 Glycosyl transferase family, helical bundle domain ND445_06630 PF05971 RNA methyltransferase ND445_06635 PF00005 ABC transporter ND445_06640 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06645 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_06650 PF00210 Ferritin-like domain ND445_06655 PF13649 Methyltransferase domain ND445_06660 PF00892 EamA-like transporter family ND445_06665 PF13505 Outer membrane protein beta-barrel domain ND445_06670 PF00571 CBS domain ND445_06670 PF01769 Divalent cation transporter ND445_06670 PF03448 MgtE intracellular N domain ND445_06675 PF01545 Cation efflux family ND445_06675 PF16916 Dimerisation domain of Zinc Transporter ND445_06680 PF12848 ABC transporter ND445_06680 PF00005 ABC transporter ND445_06685 PF00899 ThiF family ND445_06690 PF03454 MoeA C-terminal region (domain IV) ND445_06690 PF00994 Probable molybdopterin binding domain ND445_06690 PF03453 MoeA N-terminal region (domain I and II) ND445_06700 PF00756 Putative esterase ND445_06705 PF08240 Alcohol dehydrogenase GroES-like domain ND445_06705 PF00107 Zinc-binding dehydrogenase ND445_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_06710 PF03466 LysR substrate binding domain ND445_06715 PF06779 Uncharacterised MFS-type transporter YbfB ND445_06720 PF01227 GTP cyclohydrolase I ND445_06725 PF04235 Protein of unknown function (DUF418) ND445_06730 PF00356 Bacterial regulatory proteins, lacI family ND445_06735 PF13407 Periplasmic binding protein domain ND445_06740 PF00005 ABC transporter ND445_06745 PF02653 Branched-chain amino acid transport system / permease component ND445_06750 PF02698 DUF218 domain ND445_06755 PF03949 Malic enzyme, NAD binding domain ND445_06755 PF00390 Malic enzyme, N-terminal domain ND445_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_06765 PF03466 LysR substrate binding domain ND445_06770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND445_06770 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND445_06775 PF04172 LrgB-like family ND445_06780 PF03788 LrgA family ND445_06790 PF09334 tRNA synthetases class I (M) ND445_06790 PF01588 Putative tRNA binding domain ND445_06795 PF10609 NUBPL iron-transfer P-loop NTPase ND445_06800 PF00485 Phosphoribulokinase / Uridine kinase family ND445_06805 PF00692 dUTPase ND445_06810 PF05170 AsmA family ND445_06815 PF03606 C4-dicarboxylate anaerobic carrier ND445_06820 PF00571 CBS domain ND445_06820 PF03471 Transporter associated domain ND445_06820 PF03741 Integral membrane protein TerC family ND445_06825 PF00483 Nucleotidyl transferase ND445_06830 PF00483 Nucleotidyl transferase ND445_06835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND445_06835 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND445_06845 PF01502 Phosphoribosyl-AMP cyclohydrolase ND445_06845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND445_06850 PF00977 Histidine biosynthesis protein ND445_06855 PF00977 Histidine biosynthesis protein ND445_06860 PF00117 Glutamine amidotransferase class-I ND445_06865 PF00475 Imidazoleglycerol-phosphate dehydratase ND445_06870 PF00155 Aminotransferase class I and II ND445_06875 PF00815 Histidinol dehydrogenase ND445_06880 PF08029 HisG, C-terminal domain ND445_06880 PF01634 ATP phosphoribosyltransferase ND445_06890 PF01370 NAD dependent epimerase/dehydratase family ND445_06895 PF13417 Glutathione S-transferase, N-terminal domain ND445_06895 PF00043 Glutathione S-transferase, C-terminal domain ND445_06910 PF01053 Cys/Met metabolism PLP-dependent enzyme ND445_06915 PF00291 Pyridoxal-phosphate dependent enzyme ND445_06915 PF00571 CBS domain ND445_06920 PF00768 D-alanyl-D-alanine carboxypeptidase ND445_06920 PF07943 Penicillin-binding protein 5, C-terminal domain ND445_06925 PF03313 Serine dehydratase alpha chain ND445_06925 PF03315 Serine dehydratase beta chain ND445_06935 PF08220 DeoR-like helix-turn-helix domain ND445_06935 PF00455 DeoR C terminal sensor domain ND445_06940 PF01791 DeoC/LacD family aldolase ND445_06945 PF01569 PAP2 superfamily ND445_06955 PF02080 TrkA-C domain ND445_06955 PF06826 Predicted Permease Membrane Region ND445_06960 PF00462 Glutaredoxin ND445_06965 PF07214 Protein of unknown function (DUF1418) ND445_06970 PF10722 Putative bacterial sensory transduction regulator ND445_06975 PF13416 Bacterial extracellular solute-binding protein ND445_06980 PF00005 ABC transporter ND445_06980 PF08402 TOBE domain ND445_06985 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06990 PF00528 Binding-protein-dependent transport system inner membrane component ND445_06995 PF10767 Protein of unknown function (DUF2593) ND445_07000 PF05958 tRNA (Uracil-5-)-methyltransferase ND445_07005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_07010 PF00528 Binding-protein-dependent transport system inner membrane component ND445_07015 PF00528 Binding-protein-dependent transport system inner membrane component ND445_07020 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_07025 PF00005 ABC transporter ND445_07030 PF12883 Protein of unknown function (DUF3828) ND445_07035 PF01906 Putative heavy-metal-binding ND445_07040 PF01370 NAD dependent epimerase/dehydratase family ND445_07045 PF13460 NAD(P)H-binding ND445_07045 PF11066 Protein of unknown function (DUF2867) ND445_07050 PF01212 Beta-eliminating lyase ND445_07055 PF00970 Oxidoreductase FAD-binding domain ND445_07055 PF00175 Oxidoreductase NAD-binding domain ND445_07055 PF00111 2Fe-2S iron-sulfur cluster binding domain ND445_07060 PF03063 Prismane/CO dehydrogenase family ND445_07065 PF03956 Lysine exporter LysO ND445_07070 PF11398 Protein of unknown function (DUF2813) ND445_07075 PF04393 Protein of unknown function (DUF535) ND445_07080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND445_07085 PF00005 ABC transporter ND445_07085 PF12704 MacB-like periplasmic core domain ND445_07085 PF02687 FtsX-like permease family ND445_07090 PF00313 'Cold-shock' DNA-binding domain ND445_07095 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND445_07100 PF00004 ATPase family associated with various cellular activities (AAA) ND445_07100 PF07724 AAA domain (Cdc48 subfamily) ND445_07100 PF17871 AAA lid domain ND445_07100 PF02861 Clp amino terminal domain, pathogenicity island component ND445_07100 PF10431 C-terminal, D2-small domain, of ClpB protein ND445_07105 PF01176 Translation initiation factor 1A / IF-1 ND445_07110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND445_07115 PF00664 ABC transporter transmembrane region ND445_07115 PF00005 ABC transporter ND445_07120 PF00664 ABC transporter transmembrane region ND445_07120 PF00005 ABC transporter ND445_07125 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_07130 PF01037 Lrp/AsnC ligand binding domain ND445_07135 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND445_07135 PF17854 FtsK alpha domain ND445_07135 PF09397 Ftsk gamma domain ND445_07135 PF01580 FtsK/SpoIIIE family ND445_07140 PF03548 Outer membrane lipoprotein carrier protein LolA ND445_07145 PF00004 ATPase family associated with various cellular activities (AAA) ND445_07145 PF16193 AAA C-terminal domain ND445_07145 PF12002 MgsA AAA+ ATPase C terminal ND445_07150 PF02403 Seryl-tRNA synthetase N-terminal domain ND445_07150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND445_07155 PF07690 Major Facilitator Superfamily ND445_07160 PF04055 Radical SAM superfamily ND445_07165 PF01228 Glycine radical ND445_07165 PF02901 Pyruvate formate lyase-like ND445_07170 PF01226 Formate/nitrite transporter ND445_07175 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND445_07175 PF18381 YcaO cyclodehydratase C-terminal domain ND445_07180 PF00710 Asparaginase, N-terminal ND445_07180 PF17763 Glutaminase/Asparaginase C-terminal domain ND445_07185 PF00266 Aminotransferase class-V ND445_07190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND445_07195 PF02224 Cytidylate kinase ND445_07200 PF00575 S1 RNA binding domain ND445_07205 PF00216 Bacterial DNA-binding protein ND445_07210 PF00753 Metallo-beta-lactamase superfamily ND445_07210 PF03772 Competence protein ND445_07215 PF00664 ABC transporter transmembrane region ND445_07215 PF00005 ABC transporter ND445_07220 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND445_07225 PF07063 Domain of unknown function (DUF1338) ND445_07230 PF00313 'Cold-shock' DNA-binding domain ND445_07235 PF00313 'Cold-shock' DNA-binding domain ND445_07240 PF03966 Trm112p-like protein ND445_07245 PF02348 Cytidylyltransferase ND445_07250 PF01636 Phosphotransferase enzyme family ND445_07255 PF02698 DUF218 domain ND445_07260 PF13847 Methyltransferase domain ND445_07265 PF03882 MukF winged-helix domain ND445_07265 PF17192 MukF middle domain ND445_07265 PF17193 MukF C-terminal domain ND445_07270 PF04288 MukE-like family ND445_07275 PF04310 MukB N-terminal ND445_07275 PF16330 MukB hinge domain ND445_07280 PF01471 Putative peptidoglycan binding domain ND445_07280 PF03734 L,D-transpeptidase catalytic domain ND445_07285 PF05951 Bacterial protein of unknown function (DUF882) ND445_07290 PF00753 Metallo-beta-lactamase superfamily ND445_07295 PF00155 Aminotransferase class I and II ND445_07300 PF00267 Gram-negative porin ND445_07305 PF01336 OB-fold nucleic acid binding domain ND445_07305 PF00152 tRNA synthetases class II (D, K and N) ND445_07310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND445_07310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND445_07315 PF01433 Peptidase family M1 domain ND445_07315 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND445_07315 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND445_07320 PF01180 Dihydroorotate dehydrogenase ND445_07325 PF07126 Cell-division protein ZapC ND445_07330 PF03476 MOSC N-terminal beta barrel domain ND445_07330 PF03473 MOSC domain ND445_07330 PF00111 2Fe-2S iron-sulfur cluster binding domain ND445_07335 PF02926 THUMP domain ND445_07335 PF10672 S-adenosylmethionine-dependent methyltransferase ND445_07335 PF01170 Putative RNA methylase family UPF0020 ND445_07340 PF16326 ABC transporter C-terminal domain ND445_07340 PF12848 ABC transporter ND445_07340 PF00005 ABC transporter ND445_07345 PF04403 Paraquat-inducible protein A ND445_07350 PF02470 MlaD protein ND445_07355 PF03886 ABC-type transport auxiliary lipoprotein component ND445_07360 PF04957 Ribosome modulation factor ND445_07365 PF07977 FabA-like domain ND445_07370 PF05362 Lon protease (S16) C-terminal proteolytic domain ND445_07370 PF13654 AAA domain ND445_07375 PF17414 MatP C-terminal ribbon-helix-helix domain ND445_07375 PF06303 MatP N-terminal domain ND445_07380 PF00691 OmpA family ND445_07380 PF01389 OmpA-like transmembrane domain ND445_07385 PF03846 Cell division inhibitor SulA ND445_07390 PF04994 TfoX C-terminal domain ND445_07390 PF04993 TfoX N-terminal domain ND445_07395 PF12805 FUSC-like inner membrane protein yccS ND445_07400 PF03733 Inner membrane component domain ND445_07405 PF00580 UvrD/REP helicase N-terminal domain ND445_07405 PF13361 UvrD-like helicase C-terminal domain ND445_07405 PF12462 DNA helicase IV / RNA helicase N terminal ND445_07410 PF02142 MGS-like domain ND445_07415 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND445_07420 PF13380 CoA binding domain ND445_07425 PF08755 Hemimethylated DNA-binding protein YccV like ND445_07430 PF17785 PUA-like domain ND445_07430 PF10672 S-adenosylmethionine-dependent methyltransferase ND445_07435 PF00708 Acylphosphatase ND445_07440 PF04358 DsrC like protein ND445_07450 PF00484 Carbonic anhydrase ND445_07455 PF03471 Transporter associated domain ND445_07455 PF00999 Sodium/hydrogen exchanger family ND445_07455 PF02080 TrkA-C domain ND445_07465 PF01757 Acyltransferase family ND445_07470 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND445_07475 PF00535 Glycosyl transferase family 2 ND445_07485 PF01797 Transposase IS200 like ND445_07490 PF12323 Helix-turn-helix domain ND445_07490 PF01385 Probable transposase ND445_07490 PF07282 Putative transposase DNA-binding domain ND445_07495 PF00854 POT family ND445_07505 PF03279 Bacterial lipid A biosynthesis acyltransferase ND445_07510 PF17773 UPF0176 acylphosphatase like domain ND445_07510 PF12368 Rhodanase C-terminal ND445_07510 PF00581 Rhodanese-like domain ND445_07515 PF01594 AI-2E family transporter ND445_07520 PF00196 Bacterial regulatory proteins, luxR family ND445_07525 PF01266 FAD dependent oxidoreductase ND445_07530 PF13991 BssS protein family ND445_07535 PF06183 DinI-like family ND445_07540 PF01979 Amidohydrolase family ND445_07545 PF03992 Antibiotic biosynthesis monooxygenase ND445_07555 PF12111 Polyribonucleotide phosphorylase C terminal ND445_07555 PF10150 Ribonuclease E/G family ND445_07555 PF00575 S1 RNA binding domain ND445_07560 PF00849 RNA pseudouridylate synthase ND445_07560 PF01479 S4 domain ND445_07565 PF02545 Maf-like protein ND445_07570 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND445_07575 PF01783 Ribosomal L32p protein family ND445_07580 PF02504 Fatty acid synthesis protein ND445_07585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND445_07585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND445_07590 PF00698 Acyl transferase domain ND445_07600 PF00550 Phosphopantetheine attachment site ND445_07605 PF00109 Beta-ketoacyl synthase, N-terminal domain ND445_07605 PF02801 Beta-ketoacyl synthase, C-terminal domain ND445_07610 PF01063 Amino-transferase class IV ND445_07615 PF02618 YceG-like family ND445_07620 PF02223 Thymidylate kinase ND445_07625 PF09115 DNA polymerase III, delta subunit, C terminal ND445_07630 PF01026 TatD related DNase ND445_07635 PF02378 Phosphotransferase system, EIIC ND445_07635 PF00367 phosphotransferase system, EIIB ND445_07640 PF01230 HIT domain ND445_07645 PF07233 Protein of unknown function (DUF1425) ND445_07650 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND445_07650 PF13036 Peptidoglycan-synthase activator LpoB ND445_07655 PF01636 Phosphotransferase enzyme family ND445_07660 PF00933 Glycosyl hydrolase family 3 N terminal domain ND445_07665 PF05728 Uncharacterised protein family (UPF0227) ND445_07670 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_07675 PF05433 Glycine zipper 2TM domain ND445_07680 PF00271 Helicase conserved C-terminal domain ND445_07680 PF02559 CarD-like/TRCF domain ND445_07680 PF17757 UvrB interaction domain ND445_07680 PF00270 DEAD/DEAH box helicase ND445_07680 PF03461 TRCF domain ND445_07685 PF02687 FtsX-like permease family ND445_07685 PF12704 MacB-like periplasmic core domain ND445_07690 PF00005 ABC transporter ND445_07695 PF02687 FtsX-like permease family ND445_07695 PF12704 MacB-like periplasmic core domain ND445_07700 PF00480 ROK family ND445_07705 PF02146 Sir2 family ND445_07710 PF01546 Peptidase family M20/M25/M40 ND445_07710 PF07687 Peptidase dimerisation domain ND445_07715 PF08007 Cupin superfamily protein ND445_07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_07720 PF08918 PhoQ Sensor ND445_07725 PF00072 Response regulator receiver domain ND445_07725 PF00486 Transcriptional regulatory protein, C terminal ND445_07735 PF08328 Adenylosuccinate lyase C-terminal ND445_07735 PF00206 Lyase ND445_07740 PF04356 Protein of unknown function (DUF489) ND445_07750 PF00293 NUDIX domain ND445_07755 PF00849 RNA pseudouridylate synthase ND445_07760 PF00180 Isocitrate/isopropylmalate dehydrogenase ND445_07765 PF03472 Autoinducer binding domain ND445_07765 PF00196 Bacterial regulatory proteins, luxR family ND445_07770 PF00765 Autoinducer synthase ND445_07775 PF00232 Glycosyl hydrolase family 1 ND445_07785 PF01432 Peptidase family M3 ND445_07790 PF02203 Tar ligand binding domain homologue ND445_07790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_07790 PF00672 HAMP domain ND445_07810 PF01797 Transposase IS200 like ND445_07815 PF01385 Probable transposase ND445_07815 PF07282 Putative transposase DNA-binding domain ND445_07815 PF12323 Helix-turn-helix domain ND445_07825 PF00072 Response regulator receiver domain ND445_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_07830 PF00989 PAS fold ND445_07830 PF17203 Single cache domain 3 ND445_07830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND445_07835 PF00939 Sodium:sulfate symporter transmembrane region ND445_07840 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND445_07840 PF00413 Matrixin ND445_07840 PF08548 Peptidase M10 serralysin C terminal ND445_07845 PF02974 Protease inhibitor Inh ND445_07850 PF00005 ABC transporter ND445_07850 PF00664 ABC transporter transmembrane region ND445_07855 PF00529 HlyD membrane-fusion protein of T1SS ND445_07860 PF02321 Outer membrane efflux protein ND445_07875 PF02311 AraC-like ligand binding domain ND445_07875 PF12833 Helix-turn-helix domain ND445_07880 PF02562 PhoH-like protein ND445_07885 PF01699 Sodium/calcium exchanger protein ND445_07890 PF08021 Siderophore-interacting FAD-binding domain ND445_07890 PF04954 Siderophore-interacting protein ND445_07895 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND445_07895 PF00672 HAMP domain ND445_07895 PF07730 Histidine kinase ND445_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_07905 PF02322 Cytochrome bd terminal oxidase subunit II ND445_07910 PF01654 Cytochrome bd terminal oxidase subunit I ND445_07915 PF00155 Aminotransferase class I and II ND445_07915 PF00392 Bacterial regulatory proteins, gntR family ND445_07920 PF00202 Aminotransferase class-III ND445_07925 PF04958 Arginine N-succinyltransferase beta subunit ND445_07930 PF00171 Aldehyde dehydrogenase family ND445_07935 PF04996 Succinylarginine dihydrolase ND445_07945 PF00267 Gram-negative porin ND445_07955 PF01979 Amidohydrolase family ND445_07960 PF00392 Bacterial regulatory proteins, gntR family ND445_07960 PF07702 UTRA domain ND445_07965 PF01979 Amidohydrolase family ND445_07970 PF05962 HutD ND445_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_07975 PF03466 LysR substrate binding domain ND445_07985 PF03824 High-affinity nickel-transport protein ND445_07990 PF00708 Acylphosphatase ND445_07990 PF17788 HypF Kae1-like domain ND445_07990 PF01300 Telomere recombination ND445_07990 PF07503 HypF finger ND445_07995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND445_07995 PF00384 Molybdopterin oxidoreductase ND445_07995 PF01568 Molydopterin dinucleotide binding domain ND445_08000 PF12800 4Fe-4S binding domain ND445_08000 PF13247 4Fe-4S dicluster domain ND445_08005 PF01750 Hydrogenase maturation protease ND445_08010 PF07450 Formate hydrogenlyase maturation protein HycH ND445_08015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND445_08020 PF12838 4Fe-4S dicluster domain ND445_08025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND445_08025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND445_08025 PF00374 Nickel-dependent hydrogenase ND445_08030 PF00146 NADH dehydrogenase ND445_08035 PF00361 Proton-conducting membrane transporter ND445_08040 PF13247 4Fe-4S dicluster domain ND445_08045 PF11046 Transcriptional repressor of hyc and hyp operons ND445_08050 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND445_08055 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND445_08060 PF01455 HupF/HypC family ND445_08065 PF01924 Hydrogenase formation hypA family ND445_08070 PF00586 AIR synthase related protein, N-terminal domain ND445_08070 PF02769 AIR synthase related protein, C-terminal domain ND445_08075 PF00158 Sigma-54 interaction domain ND445_08075 PF02954 Bacterial regulatory protein, Fis family ND445_08075 PF01590 GAF domain ND445_08085 PF13954 PapC N-terminal domain ND445_08085 PF00577 Outer membrane usher protein ND445_08090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_08090 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_08105 PF12833 Helix-turn-helix domain ND445_08110 PF01926 50S ribosome-binding GTPase ND445_08110 PF06071 Protein of unknown function (DUF933) ND445_08120 PF01195 Peptidyl-tRNA hydrolase ND445_08125 PF10762 Protein of unknown function (DUF2583) ND445_08130 PF14572 Phosphoribosyl synthetase-associated domain ND445_08130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND445_08135 PF00288 GHMP kinases N terminal domain ND445_08135 PF08544 GHMP kinases C terminal ND445_08140 PF03550 Outer membrane lipoprotein LolB ND445_08145 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND445_08145 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND445_08145 PF01488 Shikimate / quinate 5-dehydrogenase ND445_08150 PF03462 PCRF domain ND445_08150 PF00472 RF-1 domain ND445_08155 PF13847 Methyltransferase domain ND445_08155 PF17827 PrmC N-terminal domain ND445_08160 PF04247 Invasion gene expression up-regulator, SirB ND445_08165 PF13369 Transglutaminase-like superfamily ND445_08170 PF00793 DAHP synthetase I family ND445_08175 PF01740 STAS domain ND445_08175 PF00916 Sulfate permease family ND445_08180 PF00990 Diguanylate cyclase, GGDEF domain ND445_08190 PF03009 Glycerophosphoryl diester phosphodiesterase family ND445_08200 PF00854 POT family ND445_08205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND445_08210 PF02811 PHP domain ND445_08215 PF02613 Nitrate reductase delta subunit ND445_08220 PF07273 Protein of unknown function (DUF1439) ND445_08230 PF07690 Major Facilitator Superfamily ND445_08235 PF13302 Acetyltransferase (GNAT) domain ND445_08240 PF04337 Protein of unknown function, DUF480 ND445_08245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND445_08250 PF03023 Lipid II flippase MurJ ND445_08255 PF08479 POTRA domain, ShlB-type ND445_08255 PF17287 POTRA domain ND445_08255 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND445_08260 PF05860 haemagglutination activity domain ND445_08260 PF13332 Hemagglutinin repeat ND445_08270 PF00750 tRNA synthetases class I (R) ND445_08270 PF05746 DALR anticodon binding domain ND445_08270 PF03485 Arginyl tRNA synthetase N terminal domain ND445_08275 PF06185 YecM protein ND445_08280 PF03932 CutC family ND445_08285 PF08003 Protein of unknown function (DUF1698) ND445_08290 PF13649 Methyltransferase domain ND445_08295 PF01124 MAPEG family ND445_08300 PF01904 Protein of unknown function DUF72 ND445_08310 PF01336 OB-fold nucleic acid binding domain ND445_08310 PF02938 GAD domain ND445_08310 PF00152 tRNA synthetases class II (D, K and N) ND445_08315 PF00293 NUDIX domain ND445_08320 PF01709 Transcriptional regulator ND445_08325 PF02075 Crossover junction endodeoxyribonuclease RuvC ND445_08330 PF07499 RuvA, C-terminal domain ND445_08330 PF01330 RuvA N terminal domain ND445_08335 PF17864 RuvB AAA lid domain ND445_08335 PF05491 RuvB C-terminal winged helix domain ND445_08335 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND445_08340 PF00854 POT family ND445_08345 PF00950 ABC 3 transport family ND445_08350 PF00005 ABC transporter ND445_08355 PF01297 Zinc-uptake complex component A periplasmic ND445_08360 PF08525 Opacity-associated protein A N-terminal motif ND445_08360 PF01551 Peptidase family M23 ND445_08360 PF01476 LysM domain ND445_08365 PF03279 Bacterial lipid A biosynthesis acyltransferase ND445_08370 PF00224 Pyruvate kinase, barrel domain ND445_08370 PF02887 Pyruvate kinase, alpha/beta domain ND445_08375 PF01418 Helix-turn-helix domain, rpiR family ND445_08375 PF01380 SIS domain ND445_08380 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND445_08380 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND445_08385 PF01081 KDPG and KHG aldolase ND445_08390 PF00893 Small Multidrug Resistance protein ND445_08395 PF00893 Small Multidrug Resistance protein ND445_08400 PF01042 Endoribonuclease L-PSP ND445_08405 PF04851 Type III restriction enzyme, res subunit ND445_08405 PF13307 Helicase C-terminal domain ND445_08410 PF00814 Glycoprotease family ND445_08415 PF03843 Outer membrane lipoprotein Slp family ND445_08420 PF00501 AMP-binding enzyme ND445_08420 PF13193 AMP-binding enzyme C-terminal domain ND445_08425 PF00570 HRDC domain ND445_08425 PF01612 3'-5' exonuclease ND445_08430 PF03776 Septum formation topological specificity factor MinE ND445_08435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND445_08440 PF03775 Septum formation inhibitor MinC, C-terminal domain ND445_08440 PF05209 Septum formation inhibitor MinC, N-terminal domain ND445_08445 PF05166 YcgL domain ND445_08450 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND445_08455 PF03692 Putative zinc- or iron-chelating domain ND445_08470 PF02600 Disulfide bond formation protein DsbB ND445_08475 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND445_08480 PF00392 Bacterial regulatory proteins, gntR family ND445_08480 PF07840 FadR C-terminal domain ND445_08485 PF04293 SpoVR like protein ND445_08490 PF01266 FAD dependent oxidoreductase ND445_08495 PF00842 Alanine racemase, C-terminal domain ND445_08495 PF01168 Alanine racemase, N-terminal domain ND445_08500 PF07690 Major Facilitator Superfamily ND445_08510 PF00563 EAL domain ND445_08510 PF00990 Diguanylate cyclase, GGDEF domain ND445_08510 PF13426 PAS domain ND445_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_08515 PF03466 LysR substrate binding domain ND445_08520 PF03306 Alpha-acetolactate decarboxylase ND445_08525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND445_08525 PF00205 Thiamine pyrophosphate enzyme, central domain ND445_08525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND445_08530 PF04285 Protein of unknown function (DUF444) ND445_08535 PF08298 PrkA AAA domain ND445_08535 PF06798 PrkA serine protein kinase C-terminal domain ND445_08545 PF06629 MltA-interacting protein MipA ND445_08550 PF00884 Sulfatase ND445_08555 PF01263 Aldose 1-epimerase ND445_08560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND445_08560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND445_08565 PF01641 SelR domain ND445_08570 PF07023 Protein of unknown function (DUF1315) ND445_08575 PF00857 Isochorismatase family ND445_08580 PF00710 Asparaginase, N-terminal ND445_08580 PF17763 Glutaminase/Asparaginase C-terminal domain ND445_08585 PF01343 Peptidase family S49 ND445_08590 PF00881 Nitroreductase family ND445_08595 PF00586 AIR synthase related protein, N-terminal domain ND445_08595 PF02769 AIR synthase related protein, C-terminal domain ND445_08600 PF01751 Toprim domain ND445_08600 PF01131 DNA topoisomerase ND445_08605 PF07383 Protein of unknown function (DUF1496) ND445_08610 PF00293 NUDIX domain ND445_08615 PF03372 Endonuclease/Exonuclease/phosphatase family ND445_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_08625 PF03466 LysR substrate binding domain ND445_08645 PF01842 ACT domain ND445_08645 PF00551 Formyl transferase ND445_08650 PF02810 SEC-C motif ND445_08655 PF01734 Patatin-like phospholipase ND445_08660 PF00072 Response regulator receiver domain ND445_08665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND445_08665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND445_08665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND445_08670 PF00816 H-NS histone family ND445_08675 PF00265 Thymidine kinase ND445_08680 PF00171 Aldehyde dehydrogenase family ND445_08680 PF00465 Iron-containing alcohol dehydrogenase ND445_08690 PF01914 MarC family integral membrane protein ND445_08695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_08700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_08705 PF00528 Binding-protein-dependent transport system inner membrane component ND445_08710 PF00528 Binding-protein-dependent transport system inner membrane component ND445_08710 PF12911 N-terminal TM domain of oligopeptide transport permease C ND445_08715 PF00005 ABC transporter ND445_08715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_08720 PF00005 ABC transporter ND445_08720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_08725 PF04269 Protein of unknown function, DUF440 ND445_08730 PF13396 Phospholipase_D-nuclease N-terminal ND445_08730 PF13091 PLD-like domain ND445_08750 PF03795 YCII-related domain ND445_08765 PF00486 Transcriptional regulatory protein, C terminal ND445_08775 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_08775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_08780 PF13953 PapC C-terminal domain ND445_08780 PF13954 PapC N-terminal domain ND445_08780 PF00577 Outer membrane usher protein ND445_08800 PF03544 Gram-negative bacterial TonB protein C-terminal ND445_08805 PF03061 Thioesterase superfamily ND445_08810 PF04279 Intracellular septation protein A ND445_08815 PF01740 STAS domain ND445_08815 PF00916 Sulfate permease family ND445_08825 PF03692 Putative zinc- or iron-chelating domain ND445_08830 PF03922 OmpW family ND445_08840 PF00290 Tryptophan synthase alpha chain ND445_08845 PF00291 Pyridoxal-phosphate dependent enzyme ND445_08850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND445_08850 PF00218 Indole-3-glycerol phosphate synthase ND445_08855 PF00591 Glycosyl transferase family, a/b domain ND445_08855 PF02885 Glycosyl transferase family, helical bundle domain ND445_08860 PF00117 Glutamine amidotransferase class-I ND445_08865 PF00425 chorismate binding enzyme ND445_08865 PF04715 Anthranilate synthase component I, N terminal region ND445_08870 PF02811 PHP domain ND445_08875 PF01300 Telomere recombination ND445_08895 PF01479 S4 domain ND445_08895 PF00849 RNA pseudouridylate synthase ND445_08900 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND445_08905 PF00106 short chain dehydrogenase ND445_08910 PF08496 Peptidase family S49 N-terminal ND445_08910 PF01343 Peptidase family S49 ND445_08915 PF10692 Protein of unknown function (DUF2498) ND445_08920 PF01751 Toprim domain ND445_08920 PF01131 DNA topoisomerase ND445_08920 PF08272 Topoisomerase I zinc-ribbon-like ND445_08920 PF01396 Topoisomerase DNA binding C4 zinc finger ND445_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_08925 PF03466 LysR substrate binding domain ND445_08940 PF00330 Aconitase family (aconitate hydratase) ND445_08940 PF00694 Aconitase C-terminal domain ND445_08945 PF00925 GTP cyclohydrolase II ND445_08950 PF01569 PAP2 superfamily ND445_08955 PF06305 Lipopolysaccharide assembly protein A domain ND445_08960 PF18073 Rubredoxin metal binding domain ND445_08970 PF07338 Protein of unknown function (DUF1471) ND445_08975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND445_08980 PF01253 Translation initiation factor SUI1 ND445_08985 PF05433 Glycine zipper 2TM domain ND445_08990 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND445_08995 PF08447 PAS fold ND445_08995 PF13426 PAS domain ND445_08995 PF08448 PAS fold ND445_08995 PF05231 MASE1 ND445_08995 PF00990 Diguanylate cyclase, GGDEF domain ND445_08995 PF00563 EAL domain ND445_09000 PF08206 Ribonuclease B OB domain ND445_09000 PF00773 RNB domain ND445_09000 PF00575 S1 RNA binding domain ND445_09005 PF00633 Helix-hairpin-helix motif ND445_09005 PF10576 Iron-sulfur binding domain of endonuclease III ND445_09005 PF00730 HhH-GPD superfamily base excision DNA repair protein ND445_09010 PF02508 Rnf-Nqr subunit, membrane protein ND445_09015 PF04205 FMN-binding domain ND445_09020 PF03116 NQR2, RnfD, RnfE family ND445_09025 PF06445 GyrI-like small molecule binding domain ND445_09025 PF12833 Helix-turn-helix domain ND445_09030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND445_09030 PF13237 4Fe-4S dicluster domain ND445_09030 PF13375 RnfC Barrel sandwich hybrid domain ND445_09030 PF10531 SLBB domain ND445_09035 PF04060 Putative Fe-S cluster ND445_09040 PF02508 Rnf-Nqr subunit, membrane protein ND445_09045 PF10754 Protein of unknown function (DUF2569) ND445_09050 PF01268 Formate--tetrahydrofolate ligase ND445_09055 PF09313 Domain of unknown function (DUF1971) ND445_09055 PF03848 Tellurite resistance protein TehB ND445_09060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND445_09060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND445_09065 PF13593 SBF-like CPA transporter family (DUF4137) ND445_09070 PF00962 Adenosine/AMP deaminase ND445_09075 PF06097 Bacterial protein of unknown function (DUF945) ND445_09080 PF01238 Phosphomannose isomerase type I ND445_09085 PF00206 Lyase ND445_09085 PF10415 Fumarase C C-terminus ND445_09090 PF05472 DNA replication terminus site-binding protein (Ter protein) ND445_09095 PF00480 ROK family ND445_09105 PF00654 Voltage gated chloride channel ND445_09110 PF06649 Protein of unknown function (DUF1161) ND445_09115 PF06932 Protein of unknown function (DUF1283) ND445_09120 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND445_09125 PF00106 short chain dehydrogenase ND445_09130 PF01510 N-acetylmuramoyl-L-alanine amidase ND445_09150 PF01048 Phosphorylase superfamily ND445_09150 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND445_09190 PF13419 Haloacid dehalogenase-like hydrolase ND445_09200 PF06445 GyrI-like small molecule binding domain ND445_09205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND445_09205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND445_09210 PF00027 Cyclic nucleotide-binding domain ND445_09210 PF13545 Crp-like helix-turn-helix domain ND445_09215 PF00582 Universal stress protein family ND445_09225 PF00455 DeoR C terminal sensor domain ND445_09225 PF08220 DeoR-like helix-turn-helix domain ND445_09230 PF03611 PTS system sugar-specific permease component ND445_09235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND445_09240 PF00596 Class II Aldolase and Adducin N-terminal domain ND445_09245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND445_09250 PF01261 Xylose isomerase-like TIM barrel ND445_09255 PF02233 NAD(P) transhydrogenase beta subunit ND445_09260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND445_09260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND445_09260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND445_09265 PF07338 Protein of unknown function (DUF1471) ND445_09270 PF13520 Amino acid permease ND445_09280 PF00072 Response regulator receiver domain ND445_09280 PF00486 Transcriptional regulatory protein, C terminal ND445_09285 PF00672 HAMP domain ND445_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_09285 PF00512 His Kinase A (phospho-acceptor) domain ND445_09290 PF00080 Copper/zinc superoxide dismutase (SODC) ND445_09295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND445_09300 PF12833 Helix-turn-helix domain ND445_09305 PF01161 Phosphatidylethanolamine-binding protein ND445_09310 PF06392 Acid shock protein repeat ND445_09315 PF00089 Trypsin ND445_09320 PF00270 DEAD/DEAH box helicase ND445_09320 PF04408 Helicase associated domain (HA2) ND445_09320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND445_09320 PF11898 Domain of unknown function (DUF3418) ND445_09320 PF00271 Helicase conserved C-terminal domain ND445_09325 PF02525 Flavodoxin-like fold ND445_09330 PF07027 Protein of unknown function (DUF1318) ND445_09335 PF13617 YnbE-like lipoprotein ND445_09345 PF11739 Dicarboxylate transport ND445_09350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND445_09350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND445_09355 PF03724 META domain ND445_09360 PF03891 Domain of unknown function (DUF333) ND445_09365 PF02308 MgtC family ND445_09370 PF00893 Small Multidrug Resistance protein ND445_09375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND445_09375 PF10371 Domain of unknown function ND445_09375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND445_09375 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND445_09375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND445_09380 PF01171 PP-loop family ND445_09385 PF01544 CorA-like Mg2+ transporter protein ND445_09390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_09395 PF00246 Zinc carboxypeptidase ND445_09400 PF13378 Enolase C-terminal domain-like ND445_09400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND445_09405 PF08534 Redoxin ND445_09410 PF18024 Helix-turn-helix domain ND445_09410 PF00158 Sigma-54 interaction domain ND445_09415 PF09722 Protein of unknown function (DUF2384) ND445_09420 PF08808 RES domain ND445_09425 PF05128 Domain of unknown function (DUF697) ND445_09430 PF04317 YcjX-like family, DUF463 ND445_09435 PF09584 Phage shock protein PspD (Phageshock_PspD) ND445_09440 PF04024 PspC domain ND445_09445 PF06667 Phage shock protein B ND445_09450 PF04012 PspA/IM30 family ND445_09455 PF00158 Sigma-54 interaction domain ND445_09455 PF02954 Bacterial regulatory protein, Fis family ND445_09465 PF02917 Pertussis toxin, subunit 1 ND445_09470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_09475 PF00528 Binding-protein-dependent transport system inner membrane component ND445_09480 PF00528 Binding-protein-dependent transport system inner membrane component ND445_09480 PF12911 N-terminal TM domain of oligopeptide transport permease C ND445_09485 PF00005 ABC transporter ND445_09485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_09490 PF00005 ABC transporter ND445_09500 PF00854 POT family ND445_09510 PF00226 DnaJ domain ND445_09510 PF01556 DnaJ C terminal domain ND445_09520 PF04893 Yip1 domain ND445_09530 PF11656 YjbD family (DUF3811) ND445_09535 PF00043 Glutathione S-transferase, C-terminal domain ND445_09535 PF02798 Glutathione S-transferase, N-terminal domain ND445_09540 PF08543 Phosphomethylpyrimidine kinase ND445_09545 PF01479 S4 domain ND445_09545 PF00579 tRNA synthetases class I (W and Y) ND445_09550 PF01243 Pyridoxamine 5'-phosphate oxidase ND445_09550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND445_09555 PF03702 Anhydro-N-acetylmuramic acid kinase ND445_09560 PF05433 Glycine zipper 2TM domain ND445_09565 PF01047 MarR family ND445_09575 PF00248 Aldo/keto reductase family ND445_09580 PF06945 Protein of unknown function (DUF1289) ND445_09585 PF08019 Phosphoethanolamine transferase EptA/EptB ND445_09585 PF00884 Sulfatase ND445_09590 PF16925 Tetracyclin repressor-like, C-terminal domain ND445_09590 PF00440 Bacterial regulatory proteins, tetR family ND445_09595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND445_09600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND445_09605 PF00929 Exonuclease ND445_09610 PF00462 Glutaredoxin ND445_09615 PF00877 NlpC/P60 family ND445_09620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND445_09620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND445_09630 PF00356 Bacterial regulatory proteins, lacI family ND445_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_09635 PF03466 LysR substrate binding domain ND445_09640 PF07690 Major Facilitator Superfamily ND445_09650 PF00677 Lumazine binding domain ND445_09655 PF01554 MatE ND445_09675 PF00224 Pyruvate kinase, barrel domain ND445_09675 PF02887 Pyruvate kinase, alpha/beta domain ND445_09680 PF04728 Lipoprotein leucine-zipper ND445_09685 PF17969 L,D-transpeptidase C-terminal domain ND445_09685 PF01476 LysM domain ND445_09685 PF03734 L,D-transpeptidase catalytic domain ND445_09690 PF02657 Fe-S metabolism associated domain ND445_09695 PF00266 Aminotransferase class-V ND445_09700 PF01458 Uncharacterized protein family (UPF0051) ND445_09705 PF00005 ABC transporter ND445_09710 PF01458 Uncharacterized protein family (UPF0051) ND445_09715 PF01521 Iron-sulphur cluster biosynthesis ND445_09720 PF03061 Thioesterase superfamily ND445_09725 PF13183 4Fe-4S dicluster domain ND445_09725 PF02913 FAD linked oxidases, C-terminal domain ND445_09725 PF01565 FAD binding domain ND445_09730 PF01594 AI-2E family transporter ND445_09740 PF00391 PEP-utilising enzyme, mobile domain ND445_09740 PF02896 PEP-utilising enzyme, TIM barrel domain ND445_09740 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND445_09745 PF03618 Kinase/pyrophosphorylase ND445_09750 PF00793 DAHP synthetase I family ND445_09755 PF10636 Hemin uptake protein hemP ND445_09760 PF07715 TonB-dependent Receptor Plug Domain ND445_09760 PF00593 TonB dependent receptor ND445_09765 PF05171 Haemin-degrading HemS.ChuX domain ND445_09770 PF01497 Periplasmic binding protein ND445_09775 PF01032 FecCD transport family ND445_09780 PF00005 ABC transporter ND445_09785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND445_09790 PF10437 Bacterial lipoate protein ligase C-terminus ND445_09790 PF03099 Biotin/lipoate A/B protein ligase family ND445_09795 PF00877 NlpC/P60 family ND445_09805 PF00892 EamA-like transporter family ND445_09810 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND445_09815 PF01522 Polysaccharide deacetylase ND445_09820 PF01370 NAD dependent epimerase/dehydratase family ND445_09820 PF02911 Formyl transferase, C-terminal domain ND445_09820 PF00551 Formyl transferase ND445_09825 PF00535 Glycosyl transferase family 2 ND445_09830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND445_09835 PF00005 ABC transporter ND445_09840 PF01032 FecCD transport family ND445_09845 PF00145 C-5 cytosine-specific DNA methylase ND445_09845 PF13411 MerR HTH family regulatory protein ND445_09850 PF09553 Eco47II restriction endonuclease ND445_09885 PF02661 Fic/DOC family ND445_09900 PF05154 TM2 domain ND445_09905 PF00216 Bacterial DNA-binding protein ND445_09910 PF03484 tRNA synthetase B5 domain ND445_09910 PF03147 Ferredoxin-fold anticodon binding domain ND445_09910 PF01588 Putative tRNA binding domain ND445_09910 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND445_09910 PF03483 B3/4 domain ND445_09915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND445_09915 PF01409 tRNA synthetases class II core domain (F) ND445_09920 PF00453 Ribosomal protein L20 ND445_09925 PF01632 Ribosomal protein L35 ND445_09930 PF00707 Translation initiation factor IF-3, C-terminal domain ND445_09930 PF05198 Translation initiation factor IF-3, N-terminal domain ND445_09935 PF03129 Anticodon binding domain ND445_09935 PF02824 TGS domain ND445_09935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND445_09935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND445_09965 PF01914 MarC family integral membrane protein ND445_09970 PF01464 Transglycosylase SLT domain ND445_09975 PF01297 Zinc-uptake complex component A periplasmic ND445_09980 PF00005 ABC transporter ND445_09985 PF00950 ABC 3 transport family ND445_09990 PF00950 ABC 3 transport family ND445_09995 PF03881 Fructosamine kinase ND445_10000 PF14002 YniB-like protein ND445_10005 PF13419 Haloacid dehalogenase-like hydrolase ND445_10010 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND445_10015 PF00375 Sodium:dicarboxylate symporter family ND445_10020 PF01510 N-acetylmuramoyl-L-alanine amidase ND445_10025 PF01614 Bacterial transcriptional regulator ND445_10025 PF09339 IclR helix-turn-helix domain ND445_10030 PF07690 Major Facilitator Superfamily ND445_10040 PF01435 Peptidase family M48 ND445_10045 PF11818 C-terminal domain of tail specific protease (DUF3340) ND445_10045 PF00595 PDZ domain ND445_10045 PF03572 Peptidase family S41 ND445_10045 PF17804 Tail specific protease N-terminal domain ND445_10050 PF04352 ProQ/FINO family ND445_10050 PF17516 ProQ C-terminal domain ND445_10055 PF13185 GAF domain ND445_10060 PF04403 Paraquat-inducible protein A ND445_10065 PF02470 MlaD protein ND445_10070 PF00563 EAL domain ND445_10070 PF01590 GAF domain ND445_10070 PF00990 Diguanylate cyclase, GGDEF domain ND445_10070 PF00360 Phytochrome region ND445_10075 PF07351 Protein of unknown function (DUF1480) ND445_10100 PF05643 Putative bacterial lipoprotein (DUF799) ND445_10110 PF03783 Curli production assembly/transport component CsgG ND445_10115 PF10753 Toxin GhoT_OrtT ND445_10135 PF00144 Beta-lactamase ND445_10280 PF00959 Phage lysozyme ND445_10285 PF04971 Bacteriophage P21 holin S ND445_10305 PF07102 Protein of unknown function (DUF1364) ND445_10315 PF05063 MT-A70 ND445_10320 PF01555 DNA methylase ND445_10330 PF01580 FtsK/SpoIIIE family ND445_10330 PF09397 Ftsk gamma domain ND445_10330 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND445_10330 PF17854 FtsK alpha domain ND445_10370 PF01381 Helix-turn-helix ND445_10370 PF00717 Peptidase S24-like ND445_10435 PF07825 Excisionase-like protein ND445_10445 PF10709 Protein of unknown function (DUF2511) ND445_10450 PF05425 Copper resistance protein D ND445_10455 PF04234 CopC domain ND445_10460 PF00210 Ferritin-like domain ND445_10465 PF06440 DNA polymerase III, theta subunit ND445_10470 PF00561 alpha/beta hydrolase fold ND445_10480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND445_10480 PF00326 Prolyl oligopeptidase family ND445_10485 PF13995 YebF-like protein ND445_10490 PF04266 ASCH domain ND445_10495 PF07130 YebG protein ND445_10500 PF03880 DbpA RNA binding domain ND445_10500 PF00270 DEAD/DEAH box helicase ND445_10500 PF00271 Helicase conserved C-terminal domain ND445_10505 PF02222 ATP-grasp domain ND445_10510 PF03701 Uncharacterised protein family (UPF0181) ND445_10515 PF04715 Anthranilate synthase component I, N terminal region ND445_10515 PF00425 chorismate binding enzyme ND445_10520 PF00293 NUDIX domain ND445_10525 PF03313 Serine dehydratase alpha chain ND445_10525 PF03315 Serine dehydratase beta chain ND445_10530 PF03471 Transporter associated domain ND445_10530 PF03741 Integral membrane protein TerC family ND445_10535 PF03610 PTS system fructose IIA component ND445_10535 PF03830 PTS system sorbose subfamily IIB component ND445_10540 PF03609 PTS system sorbose-specific iic component ND445_10545 PF03613 PTS system mannose/fructose/sorbose family IID component ND445_10550 PF06173 Protein of unknown function (DUF986) ND445_10555 PF02659 Putative manganese efflux pump ND445_10560 PF02441 Flavoprotein ND445_10575 PF02770 Acyl-CoA dehydrogenase, middle domain ND445_10575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND445_10575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND445_10585 PF00732 GMC oxidoreductase ND445_10585 PF05199 GMC oxidoreductase ND445_10590 PF00501 AMP-binding enzyme ND445_10590 PF13193 AMP-binding enzyme C-terminal domain ND445_10590 PF00668 Condensation domain ND445_10590 PF00550 Phosphopantetheine attachment site ND445_10595 PF07690 Major Facilitator Superfamily ND445_10615 PF13847 Methyltransferase domain ND445_10620 PF03717 Penicillin-binding Protein dimerisation domain ND445_10620 PF00905 Penicillin binding protein transpeptidase domain ND445_10625 PF02578 Multi-copper polyphenol oxidoreductase laccase ND445_10630 PF00313 'Cold-shock' DNA-binding domain ND445_10635 PF10736 Protein of unknown function (DUF2627) ND445_10640 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND445_10645 PF00324 Amino acid permease ND445_10660 PF13974 YebO-like protein ND445_10665 PF13998 MgrB protein ND445_10670 PF13996 YobH-like protein ND445_10675 PF10964 Protein of unknown function (DUF2766) ND445_10680 PF12833 Helix-turn-helix domain ND445_10695 PF13520 Amino acid permease ND445_10700 PF00664 ABC transporter transmembrane region ND445_10700 PF00005 ABC transporter ND445_10710 PF00563 EAL domain ND445_10710 PF01590 GAF domain ND445_10710 PF00990 Diguanylate cyclase, GGDEF domain ND445_10710 PF00360 Phytochrome region ND445_10715 PF03372 Endonuclease/Exonuclease/phosphatase family ND445_10725 PF06411 HdeA/HdeB family ND445_10730 PF07478 D-ala D-ala ligase C-terminus ND445_10730 PF01820 D-ala D-ala ligase N-terminus ND445_10745 PF08241 Methyltransferase domain ND445_10750 PF00313 'Cold-shock' DNA-binding domain ND445_10755 PF00313 'Cold-shock' DNA-binding domain ND445_10760 PF00313 'Cold-shock' DNA-binding domain ND445_10770 PF04794 YdjC-like protein ND445_10775 PF12833 Helix-turn-helix domain ND445_10775 PF07883 Cupin domain ND445_10780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND445_10785 PF00232 Glycosyl hydrolase family 1 ND445_10790 PF02378 Phosphotransferase system, EIIC ND445_10795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND445_10800 PF00849 RNA pseudouridylate synthase ND445_10800 PF01479 S4 domain ND445_10810 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND445_10815 PF03553 Na+/H+ antiporter family ND445_10825 PF13520 Amino acid permease ND445_10840 PF00849 RNA pseudouridylate synthase ND445_10845 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND445_10850 PF13520 Amino acid permease ND445_10855 PF04960 Glutaminase ND445_10885 PF13673 Acetyltransferase (GNAT) domain ND445_10895 PF00034 Cytochrome c ND445_10895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ND445_10905 PF00528 Binding-protein-dependent transport system inner membrane component ND445_10910 PF00005 ABC transporter ND445_10920 PF00672 HAMP domain ND445_10920 PF02203 Tar ligand binding domain homologue ND445_10920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_10925 PF13333 Integrase core domain ND445_10925 PF00665 Integrase core domain ND445_10925 PF13276 HTH-like domain ND445_10945 PF01066 CDP-alcohol phosphatidyltransferase ND445_10950 PF01541 GIY-YIG catalytic domain ND445_10950 PF02151 UvrB/uvrC motif ND445_10950 PF08459 UvrC Helix-hairpin-helix N-terminal ND445_10955 PF00072 Response regulator receiver domain ND445_10955 PF00196 Bacterial regulatory proteins, luxR family ND445_10960 PF10769 Protein of unknown function (DUF2594) ND445_10980 PF00324 Amino acid permease ND445_10985 PF01276 Orn/Lys/Arg decarboxylase, major domain ND445_10985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND445_10985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND445_10990 PF13520 Amino acid permease ND445_10995 PF18500 CadC C-terminal domain 1 ND445_10995 PF00486 Transcriptional regulatory protein, C terminal ND445_11000 PF00474 Sodium:solute symporter family ND445_11005 PF00171 Aldehyde dehydrogenase family ND445_11005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND445_11005 PF01619 Proline dehydrogenase ND445_11005 PF14850 DNA-binding domain of Proline dehydrogenase ND445_11010 PF00005 ABC transporter ND445_11015 PF00528 Binding-protein-dependent transport system inner membrane component ND445_11020 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_11025 PF00291 Pyridoxal-phosphate dependent enzyme ND445_11030 PF02899 Phage integrase, N-terminal SAM-like domain ND445_11035 PF04542 Sigma-70 region 2 ND445_11035 PF04539 Sigma-70 region 3 ND445_11035 PF04545 Sigma-70, region 4 ND445_11040 PF00700 Bacterial flagellin C-terminal helical region ND445_11040 PF08884 Flagellin D3 domain ND445_11040 PF00669 Bacterial flagellin N-terminal helical region ND445_11045 PF00669 Bacterial flagellin N-terminal helical region ND445_11045 PF00700 Bacterial flagellin C-terminal helical region ND445_11045 PF08884 Flagellin D3 domain ND445_11050 PF00700 Bacterial flagellin C-terminal helical region ND445_11050 PF08884 Flagellin D3 domain ND445_11050 PF00669 Bacterial flagellin N-terminal helical region ND445_11055 PF07196 Flagellin hook IN motif ND445_11055 PF07195 Flagellar hook-associated protein 2 C-terminus ND445_11055 PF02465 Flagellar hook-associated protein 2 N-terminus ND445_11060 PF02561 Flagellar protein FliS ND445_11065 PF05400 Flagellar protein FliT ND445_11070 PF12833 Helix-turn-helix domain ND445_11075 PF01966 HD domain ND445_11080 PF07885 Ion channel ND445_11080 PF02254 TrkA-N domain ND445_11085 PF01223 DNA/RNA non-specific endonuclease ND445_11095 PF02049 Flagellar hook-basal body complex protein FliE ND445_11100 PF01514 Secretory protein of YscJ/FliF family ND445_11100 PF08345 Flagellar M-ring protein C-terminal ND445_11105 PF14841 FliG middle domain ND445_11105 PF14842 FliG N-terminal domain ND445_11105 PF01706 FliG C-terminal domain ND445_11110 PF02108 Flagellar assembly protein FliH ND445_11115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND445_11115 PF18269 T3SS EscN ATPase C-terminal domain ND445_11120 PF02050 Flagellar FliJ protein ND445_11125 PF02120 Flagellar hook-length control protein FliK ND445_11130 PF03748 Flagellar basal body-associated protein FliL ND445_11135 PF02154 Flagellar motor switch protein FliM ND445_11135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND445_11140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND445_11140 PF16973 Flagellar motor switch protein FliN N-terminal ND445_11145 PF04347 Flagellar biosynthesis protein, FliO ND445_11150 PF00813 FliP family ND445_11155 PF01313 Bacterial export proteins, family 3 ND445_11160 PF01311 Bacterial export proteins, family 1 ND445_11165 PF00669 Bacterial flagellin N-terminal helical region ND445_11170 PF00460 Flagella basal body rod protein ND445_11170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND445_11175 PF10135 Rod binding protein ND445_11175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND445_11180 PF02119 Flagellar P-ring protein ND445_11185 PF02107 Flagellar L-ring protein ND445_11190 PF00460 Flagella basal body rod protein ND445_11190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND445_11195 PF00460 Flagella basal body rod protein ND445_11195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND445_11200 PF07559 Flagellar basal body protein FlaE ND445_11200 PF00460 Flagella basal body rod protein ND445_11200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND445_11205 PF03963 Flagellar hook capping protein - N-terminal region ND445_11205 PF13860 FlgD Ig-like domain ND445_11205 PF13861 FlgD Tudor-like domain ND445_11210 PF00460 Flagella basal body rod protein ND445_11210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND445_11215 PF00460 Flagella basal body rod protein ND445_11220 PF17656 FlgA N-terminal domain ND445_11220 PF13144 Chaperone for flagella basal body P-ring formation ND445_11225 PF04316 Anti-sigma-28 factor, FlgM ND445_11230 PF05130 FlgN protein ND445_11235 PF06366 Flagellar protein FlhE ND445_11240 PF00771 FHIPEP family ND445_11245 PF01312 FlhB HrpN YscU SpaS Family ND445_11250 PF00082 Subtilase family ND445_11250 PF01483 Proprotein convertase P-domain ND445_11255 PF00196 Bacterial regulatory proteins, luxR family ND445_11265 PF00419 Fimbrial protein ND445_11270 PF00577 Outer membrane usher protein ND445_11270 PF13954 PapC N-terminal domain ND445_11270 PF13953 PapC C-terminal domain ND445_11275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_11275 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_11285 PF00419 Fimbrial protein ND445_11315 PF04344 Chemotaxis phosphatase, CheZ ND445_11320 PF00072 Response regulator receiver domain ND445_11325 PF01339 CheB methylesterase ND445_11325 PF00072 Response regulator receiver domain ND445_11330 PF01739 CheR methyltransferase, SAM binding domain ND445_11330 PF03705 CheR methyltransferase, all-alpha domain ND445_11335 PF02203 Tar ligand binding domain homologue ND445_11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_11335 PF00672 HAMP domain ND445_11340 PF02203 Tar ligand binding domain homologue ND445_11340 PF00672 HAMP domain ND445_11340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_11345 PF01584 CheW-like domain ND445_11350 PF01584 CheW-like domain ND445_11350 PF09078 CheY binding ND445_11350 PF02895 Signal transducing histidine kinase, homodimeric domain ND445_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_11350 PF01627 Hpt domain ND445_11355 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND445_11355 PF00691 OmpA family ND445_11360 PF01618 MotA/TolQ/ExbB proton channel family ND445_11365 PF05280 Flagellar transcriptional activator (FlhC) ND445_11370 PF05247 Flagellar transcriptional activator (FlhD) ND445_11375 PF00582 Universal stress protein family ND445_11380 PF02308 MgtC family ND445_11385 PF00672 HAMP domain ND445_11385 PF02203 Tar ligand binding domain homologue ND445_11385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND445_11390 PF10781 Dextransucrase DSRB ND445_11395 PF00313 'Cold-shock' DNA-binding domain ND445_11405 PF00356 Bacterial regulatory proteins, lacI family ND445_11410 PF02929 Beta galactosidase small chain ND445_11410 PF16353 Domain of unknown function(DUF4981) ND445_11410 PF00703 Glycosyl hydrolases family 2 ND445_11410 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND445_11410 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND445_11415 PF00109 Beta-ketoacyl synthase, N-terminal domain ND445_11415 PF14765 Polyketide synthase dehydratase ND445_11415 PF16197 Ketoacyl-synthetase C-terminal extension ND445_11415 PF00107 Zinc-binding dehydrogenase ND445_11415 PF08240 Alcohol dehydrogenase GroES-like domain ND445_11415 PF00550 Phosphopantetheine attachment site ND445_11415 PF08659 KR domain ND445_11415 PF02801 Beta-ketoacyl synthase, C-terminal domain ND445_11415 PF00698 Acyl transferase domain ND445_11420 PF10777 Inner membrane protein YlaC ND445_11430 PF14001 YdfZ protein ND445_11440 PF06167 Glucose-regulated metallo-peptidase M90 ND445_11450 PF00589 Phage integrase family ND445_11450 PF13356 Arm DNA-binding domain ND445_11465 PF13693 Winged helix-turn-helix DNA-binding ND445_11500 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ND445_11520 PF04335 VirB8 protein ND445_11525 PF03524 Conjugal transfer protein ND445_11530 PF03743 Bacterial conjugation TrbI-like protein ND445_11535 PF00437 Type II/IV secretion system protein ND445_11550 PF08401 Domain of unknown function (DUF1738) ND445_11550 PF18818 Metallopeptidase superfamily domain ND445_11605 PF01648 4'-phosphopantetheinyl transferase superfamily ND445_11605 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND445_11610 PF00939 Sodium:sulfate symporter transmembrane region ND445_11615 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND445_11620 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND445_11625 PF04223 Citrate lyase, alpha subunit (CitF) ND445_11630 PF03328 HpcH/HpaI aldolase/citrate lyase family ND445_11635 PF06857 Malonate decarboxylase delta subunit (MdcD) ND445_11640 PF08218 Citrate lyase ligase C-terminal domain ND445_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_11645 PF00989 PAS fold ND445_11645 PF17203 Single cache domain 3 ND445_11645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND445_11650 PF12431 Transcriptional regulator ND445_11650 PF00072 Response regulator receiver domain ND445_11655 PF00196 Bacterial regulatory proteins, luxR family ND445_11655 PF00072 Response regulator receiver domain ND445_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_11660 PF07730 Histidine kinase ND445_11660 PF05231 MASE1 ND445_11665 PF07690 Major Facilitator Superfamily ND445_11675 PF00528 Binding-protein-dependent transport system inner membrane component ND445_11680 PF00005 ABC transporter ND445_11680 PF08402 TOBE domain ND445_11695 PF04363 Protein of unknown function (DUF496) ND445_11700 PF04632 Fusaric acid resistance protein family ND445_11710 PF08411 Exonuclease C-terminal ND445_11710 PF00929 Exonuclease ND445_11715 PF13520 Amino acid permease ND445_11720 PF00593 TonB dependent receptor ND445_11720 PF07715 TonB-dependent Receptor Plug Domain ND445_11725 PF00005 ABC transporter ND445_11730 PF01032 FecCD transport family ND445_11740 PF00324 Amino acid permease ND445_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_11745 PF03466 LysR substrate binding domain ND445_11755 PF03601 Conserved hypothetical protein 698 ND445_11760 PF01261 Xylose isomerase-like TIM barrel ND445_11765 PF02378 Phosphotransferase system, EIIC ND445_11765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND445_11770 PF00294 pfkB family carbohydrate kinase ND445_11775 PF00381 PTS HPr component phosphorylation site ND445_11775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND445_11780 PF00293 NUDIX domain ND445_11785 PF03264 NapC/NirT cytochrome c family, N-terminal region ND445_11790 PF18364 Molybdopterin oxidoreductase N-terminal domain ND445_11790 PF01568 Molydopterin dinucleotide binding domain ND445_11790 PF00384 Molybdopterin oxidoreductase ND445_11795 PF03692 Putative zinc- or iron-chelating domain ND445_11800 PF03222 Tryptophan/tyrosine permease family ND445_11810 PF01132 Elongation factor P (EF-P) OB domain ND445_11810 PF08207 Elongation factor P (EF-P) KOW-like domain ND445_11810 PF09285 Elongation factor P, C-terminal ND445_11815 PF03786 D-mannonate dehydratase (UxuA) ND445_11820 PF01232 Mannitol dehydrogenase Rossmann domain ND445_11820 PF08125 Mannitol dehydrogenase C-terminal domain ND445_11830 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND445_11830 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND445_11835 PF01569 PAP2 superfamily ND445_11840 PF00877 NlpC/P60 family ND445_11845 PF12792 CSS motif domain associated with EAL ND445_11845 PF00563 EAL domain ND445_11850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND445_11855 PF00528 Binding-protein-dependent transport system inner membrane component ND445_11860 PF00528 Binding-protein-dependent transport system inner membrane component ND445_11860 PF12911 N-terminal TM domain of oligopeptide transport permease C ND445_11865 PF00005 ABC transporter ND445_11865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND445_11870 PF13989 YejG-like protein ND445_11875 PF07690 Major Facilitator Superfamily ND445_11880 PF01479 S4 domain ND445_11880 PF00849 RNA pseudouridylate synthase ND445_11885 PF00271 Helicase conserved C-terminal domain ND445_11885 PF04851 Type III restriction enzyme, res subunit ND445_11890 PF01386 Ribosomal L25p family ND445_11895 PF04245 37-kD nucleoid-associated bacterial protein ND445_11900 PF07208 Protein of unknown function (DUF1414) ND445_11905 PF00884 Sulfatase ND445_11905 PF11893 Domain of unknown function (DUF3413) ND445_11920 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND445_11930 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ND445_11935 PF04865 Baseplate J-like protein ND445_11980 PF04984 Phage tail sheath protein subtilisin-like domain ND445_11980 PF17482 Phage tail sheath C-terminal domain ND445_12030 PF03354 Phage Terminase ND445_12050 PF03245 Bacteriophage Rz lysis protein ND445_12055 PF13539 D-alanyl-D-alanine carboxypeptidase ND445_12085 PF00069 Protein kinase domain ND445_12085 PF03793 PASTA domain ND445_12090 PF01555 DNA methylase ND445_12100 PF06147 Protein of unknown function (DUF968) ND445_12115 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND445_12120 PF03354 Phage Terminase ND445_12155 PF10065 Uncharacterized conserved protein (DUF2303) ND445_12200 PF06183 DinI-like family ND445_12205 PF12706 Beta-lactamase superfamily domain ND445_12210 PF00144 Beta-lactamase ND445_12215 PF13302 Acetyltransferase (GNAT) domain ND445_12230 PF00267 Gram-negative porin ND445_12235 PF07690 Major Facilitator Superfamily ND445_12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_12240 PF01627 Hpt domain ND445_12240 PF16359 RcsD-ABL domain ND445_12245 PF00196 Bacterial regulatory proteins, luxR family ND445_12245 PF00072 Response regulator receiver domain ND445_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_12250 PF00512 His Kinase A (phospho-acceptor) domain ND445_12250 PF09456 RcsC Alpha-Beta-Loop (ABL) ND445_12250 PF00072 Response regulator receiver domain ND445_12255 PF03989 DNA gyrase C-terminal domain, beta-propeller ND445_12255 PF00521 DNA gyrase/topoisomerase IV, subunit A ND445_12265 PF03477 ATP cone domain ND445_12265 PF02867 Ribonucleotide reductase, barrel domain ND445_12265 PF00317 Ribonucleotide reductase, all-alpha domain ND445_12270 PF00268 Ribonucleotide reductase, small chain ND445_12275 PF00111 2Fe-2S iron-sulfur cluster binding domain ND445_12285 PF03974 Ecotin ND445_12290 PF00994 Probable molybdopterin binding domain ND445_12295 PF04138 GtrA-like protein ND445_12300 PF00535 Glycosyl transferase family 2 ND445_12310 PF03222 Tryptophan/tyrosine permease family ND445_12315 PF07437 YfaZ precursor ND445_12320 PF00199 Catalase ND445_12320 PF06628 Catalase-related immune-responsive ND445_12325 PF00501 AMP-binding enzyme ND445_12325 PF13193 AMP-binding enzyme C-terminal domain ND445_12330 PF13378 Enolase C-terminal domain-like ND445_12335 PF00378 Enoyl-CoA hydratase/isomerase ND445_12340 PF12697 Alpha/beta hydrolase family ND445_12345 PF16582 Middle domain of thiamine pyrophosphate ND445_12345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND445_12345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND445_12350 PF00425 chorismate binding enzyme ND445_12355 PF05957 Bacterial protein of unknown function (DUF883) ND445_12360 PF06496 Protein of unknown function (DUF1097) ND445_12365 PF00361 Proton-conducting membrane transporter ND445_12370 PF00361 Proton-conducting membrane transporter ND445_12375 PF00361 Proton-conducting membrane transporter ND445_12375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND445_12380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND445_12385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND445_12390 PF12838 4Fe-4S dicluster domain ND445_12395 PF00146 NADH dehydrogenase ND445_12400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND445_12400 PF01568 Molydopterin dinucleotide binding domain ND445_12400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND445_12400 PF00384 Molybdopterin oxidoreductase ND445_12405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND445_12405 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND445_12405 PF10531 SLBB domain ND445_12415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND445_12415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND445_12420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND445_12425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND445_12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_12430 PF03466 LysR substrate binding domain ND445_12435 PF00155 Aminotransferase class I and II ND445_12445 PF03600 Citrate transporter ND445_12445 PF02080 TrkA-C domain ND445_12455 PF03887 YfbU domain ND445_12460 PF04217 Protein of unknown function, DUF412 ND445_12465 PF00871 Acetokinase family ND445_12470 PF07085 DRTGG domain ND445_12470 PF01515 Phosphate acetyl/butaryl transferase ND445_12475 PF00356 Bacterial regulatory proteins, lacI family ND445_12475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND445_12480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND445_12490 PF03611 PTS system sugar-specific permease component ND445_12495 PF00293 NUDIX domain ND445_12500 PF12850 Calcineurin-like phosphoesterase superfamily domain ND445_12515 PF00043 Glutathione S-transferase, C-terminal domain ND445_12515 PF02798 Glutathione S-transferase, N-terminal domain ND445_12520 PF08338 Domain of unknown function (DUF1731) ND445_12520 PF01370 NAD dependent epimerase/dehydratase family ND445_12525 PF00005 ABC transporter ND445_12530 PF00528 Binding-protein-dependent transport system inner membrane component ND445_12535 PF00528 Binding-protein-dependent transport system inner membrane component ND445_12540 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_12550 PF02441 Flavoprotein ND445_12555 PF00156 Phosphoribosyl transferase domain ND445_12560 PF02674 Colicin V production protein ND445_12565 PF05036 Sporulation related domain ND445_12570 PF02875 Mur ligase family, glutamate ligase domain ND445_12570 PF08245 Mur ligase middle domain ND445_12575 PF01039 Carboxyl transferase domain ND445_12575 PF17848 Acetyl-coA carboxylase zinc finger domain ND445_12580 PF09335 SNARE associated Golgi protein ND445_12585 PF01416 tRNA pseudouridine synthase ND445_12590 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND445_12590 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND445_12595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND445_12595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND445_12595 PF11890 Domain of unknown function (DUF3410) ND445_12615 PF00155 Aminotransferase class I and II ND445_12620 PF00578 AhpC/TSA family ND445_12650 PF02801 Beta-ketoacyl synthase, C-terminal domain ND445_12650 PF00109 Beta-ketoacyl synthase, N-terminal domain ND445_12655 PF01266 FAD dependent oxidoreductase ND445_12655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND445_12660 PF08891 YfcL protein ND445_12665 PF04315 Elongation factor P hydroxylase ND445_12670 PF01925 Sulfite exporter TauE/SafE ND445_12675 PF03411 Penicillin-insensitive murein endopeptidase ND445_12680 PF01264 Chorismate synthase ND445_12685 PF05175 Methyltransferase small domain ND445_12690 PF01713 Smr domain ND445_12695 PF00300 Histidine phosphatase superfamily (branch 1) ND445_12700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND445_12700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND445_12700 PF00378 Enoyl-CoA hydratase/isomerase ND445_12705 PF02803 Thiolase, C-terminal domain ND445_12705 PF00108 Thiolase, N-terminal domain ND445_12710 PF04175 Protein of unknown function (DUF406) ND445_12715 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND445_12720 PF04333 MlaA lipoprotein ND445_12725 PF03918 Cytochrome C biogenesis protein ND445_12730 PF03918 Cytochrome C biogenesis protein ND445_12735 PF08534 Redoxin ND445_12740 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND445_12740 PF01578 Cytochrome C assembly protein ND445_12745 PF03100 CcmE ND445_12750 PF04995 Heme exporter protein D (CcmD) ND445_12755 PF01578 Cytochrome C assembly protein ND445_12760 PF03379 CcmB protein ND445_12765 PF00005 ABC transporter ND445_12775 PF14659 Phage integrase, N-terminal SAM-like domain ND445_12775 PF13356 Arm DNA-binding domain ND445_12775 PF00589 Phage integrase family ND445_12780 PF08676 MutL C terminal dimerisation domain ND445_12780 PF01119 DNA mismatch repair protein, C-terminal domain ND445_12835 PF03831 PhnA domain ND445_12835 PF08274 PhnA Zinc-Ribbon ND445_12840 PF13406 Transglycosylase SLT domain ND445_12855 PF01292 Prokaryotic cytochrome b561 ND445_12860 PF00155 Aminotransferase class I and II ND445_12865 PF07350 Protein of unknown function (DUF1479) ND445_12870 PF07694 5TMR of 5TMR-LYT ND445_12870 PF06580 Histidine kinase ND445_12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_12875 PF00072 Response regulator receiver domain ND445_12875 PF04397 LytTr DNA-binding domain ND445_12880 PF07690 Major Facilitator Superfamily ND445_12885 PF02685 Glucokinase ND445_12895 PF03466 LysR substrate binding domain ND445_12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_12905 PF01566 Natural resistance-associated macrophage protein ND445_12910 PF07670 Nucleoside recognition ND445_12910 PF07662 Na+ dependent nucleoside transporter C-terminus ND445_12910 PF01773 Na+ dependent nucleoside transporter N-terminus ND445_12945 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND445_12970 PF12843 Putative quorum-sensing-regulated virulence factor ND445_12975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND445_12975 PF12826 Helix-hairpin-helix motif ND445_12975 PF03120 NAD-dependent DNA ligase OB-fold domain ND445_12975 PF00533 BRCA1 C Terminus (BRCT) domain ND445_12975 PF01653 NAD-dependent DNA ligase adenylation domain ND445_12980 PF04354 ZipA, C-terminal FtsZ-binding domain ND445_12990 PF00291 Pyridoxal-phosphate dependent enzyme ND445_12995 PF00381 PTS HPr component phosphorylation site ND445_13000 PF05524 PEP-utilising enzyme, N-terminal ND445_13000 PF00391 PEP-utilising enzyme, mobile domain ND445_13000 PF02896 PEP-utilising enzyme, TIM barrel domain ND445_13005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND445_13010 PF00291 Pyridoxal-phosphate dependent enzyme ND445_13015 PF00005 ABC transporter ND445_13020 PF00528 Binding-protein-dependent transport system inner membrane component ND445_13025 PF00528 Binding-protein-dependent transport system inner membrane component ND445_13035 PF07690 Major Facilitator Superfamily ND445_13040 PF01418 Helix-turn-helix domain, rpiR family ND445_13040 PF01380 SIS domain ND445_13045 PF04074 YhcH/YjgK/YiaL ND445_13050 PF00480 ROK family ND445_13055 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND445_13060 PF00701 Dihydrodipicolinate synthetase family ND445_13065 PF04261 Dyp-type peroxidase family ND445_13070 PF06572 Protein of unknown function (DUF1131) ND445_13075 PF04076 Bacterial OB fold (BOF) protein ND445_13125 PF00583 Acetyltransferase (GNAT) family ND445_13130 PF01218 Coproporphyrinogen III oxidase ND445_13135 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND445_13140 PF00390 Malic enzyme, N-terminal domain ND445_13140 PF03949 Malic enzyme, NAD binding domain ND445_13140 PF01515 Phosphate acetyl/butaryl transferase ND445_13145 PF00293 NUDIX domain ND445_13150 PF03264 NapC/NirT cytochrome c family, N-terminal region ND445_13155 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND445_13160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND445_13160 PF00384 Molybdopterin oxidoreductase ND445_13160 PF01568 Molydopterin dinucleotide binding domain ND445_13160 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND445_13165 PF03927 NapD protein ND445_13170 PF00037 4Fe-4S binding domain ND445_13170 PF12800 4Fe-4S binding domain ND445_13170 PF13187 4Fe-4S dicluster domain ND445_13175 PF00196 Bacterial regulatory proteins, luxR family ND445_13175 PF00072 Response regulator receiver domain ND445_13185 PF00873 AcrB/AcrD/AcrF family ND445_13195 PF01817 Chorismate mutase type II ND445_13200 PF03960 ArsC family ND445_13205 PF01546 Peptidase family M20/M25/M40 ND445_13205 PF07687 Peptidase dimerisation domain ND445_13210 PF02557 D-alanyl-D-alanine carboxypeptidase ND445_13215 PF13980 Uncharacterised protein family (UPF0370) ND445_13220 PF02230 Phospholipase/Carboxylesterase ND445_13225 PF08351 Domain of unknown function (DUF1726) ND445_13225 PF13718 GNAT acetyltransferase 2 ND445_13225 PF05127 Helicase ND445_13225 PF17176 tRNA-binding domain ND445_13230 PF04284 Protein of unknown function (DUF441) ND445_13235 PF01259 SAICAR synthetase ND445_13240 PF06804 NlpB/DapX lipoprotein ND445_13245 PF00701 Dihydrodipicolinate synthetase family ND445_13250 PF01842 ACT domain ND445_13255 PF00578 AhpC/TSA family ND445_13260 PF01594 AI-2E family transporter ND445_13265 PF01435 Peptidase family M48 ND445_13265 PF07720 Tetratricopeptide repeat ND445_13270 PF03960 ArsC family ND445_13275 PF00308 Bacterial dnaA protein ND445_13280 PF00860 Permease family ND445_13290 PF00586 AIR synthase related protein, N-terminal domain ND445_13290 PF02769 AIR synthase related protein, C-terminal domain ND445_13295 PF00551 Formyl transferase ND445_13300 PF13302 Acetyltransferase (GNAT) domain ND445_13305 PF00005 ABC transporter ND445_13310 PF00528 Binding-protein-dependent transport system inner membrane component ND445_13315 PF00528 Binding-protein-dependent transport system inner membrane component ND445_13320 PF02503 Polyphosphate kinase middle domain ND445_13320 PF13090 Polyphosphate kinase C-terminal domain 2 ND445_13320 PF17941 Polyphosphate kinase C-terminal domain 1 ND445_13320 PF13089 Polyphosphate kinase N-terminal domain ND445_13325 PF02541 Ppx/GppA phosphatase family ND445_13335 PF01769 Divalent cation transporter ND445_13335 PF00571 CBS domain ND445_13335 PF03448 MgtE intracellular N domain ND445_13340 PF00012 Hsp70 protein ND445_13350 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_13350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_13355 PF00577 Outer membrane usher protein ND445_13355 PF13953 PapC C-terminal domain ND445_13355 PF13954 PapC N-terminal domain ND445_13370 PF13533 Biotin-lipoyl like ND445_13375 PF00873 AcrB/AcrD/AcrF family ND445_13380 PF00873 AcrB/AcrD/AcrF family ND445_13385 PF07690 Major Facilitator Superfamily ND445_13390 PF00672 HAMP domain ND445_13390 PF00512 His Kinase A (phospho-acceptor) domain ND445_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_13395 PF00072 Response regulator receiver domain ND445_13395 PF00486 Transcriptional regulatory protein, C terminal ND445_13400 PF07411 Domain of unknown function (DUF1508) ND445_13405 PF01136 Peptidase family U32 ND445_13405 PF16325 Peptidase family U32 C-terminal domain ND445_13410 PF00781 Diacylglycerol kinase catalytic domain ND445_13425 PF08543 Phosphomethylpyrimidine kinase ND445_13440 PF00117 Glutamine amidotransferase class-I ND445_13440 PF00958 GMP synthase C terminal domain ND445_13440 PF02540 NAD synthase ND445_13445 PF00571 CBS domain ND445_13445 PF00478 IMP dehydrogenase / GMP reductase domain ND445_13450 PF02601 Exonuclease VII, large subunit ND445_13450 PF13742 OB-fold nucleic acid binding domain ND445_13455 PF07191 zinc-ribbons ND445_13460 PF01926 50S ribosome-binding GTPase ND445_13460 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND445_13465 PF13360 PQQ-like domain ND445_13470 PF09976 Tetratricopeptide repeat-like domain ND445_13475 PF03129 Anticodon binding domain ND445_13475 PF13393 Histidyl-tRNA synthetase ND445_13480 PF04551 GcpE protein ND445_13485 PF13464 Domain of unknown function (DUF4115) ND445_13495 PF04055 Radical SAM superfamily ND445_13500 PF00334 Nucleoside diphosphate kinase ND445_13510 PF00905 Penicillin binding protein transpeptidase domain ND445_13510 PF06832 Penicillin-Binding Protein C-terminus Family ND445_13510 PF00912 Transglycosylase ND445_13515 PF07703 Alpha-2-macroglobulin bait region domain ND445_13515 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND445_13515 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND445_13515 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND445_13515 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND445_13515 PF17962 Bacterial macroglobulin domain 6 ND445_13515 PF01835 MG2 domain ND445_13515 PF07678 A-macroglobulin TED domain ND445_13515 PF00207 Alpha-2-macroglobulin family ND445_13520 PF07179 SseB protein N-terminal domain ND445_13520 PF14581 SseB protein C-terminal domain ND445_13525 PF12404 Peptidase ND445_13525 PF00883 Cytosol aminopeptidase family, catalytic domain ND445_13530 PF04384 Iron-sulphur cluster assembly ND445_13535 PF00111 2Fe-2S iron-sulfur cluster binding domain ND445_13540 PF00012 Hsp70 protein ND445_13545 PF00226 DnaJ domain ND445_13545 PF07743 HSCB C-terminal oligomerisation domain ND445_13550 PF01521 Iron-sulphur cluster biosynthesis ND445_13555 PF01592 NifU-like N terminal domain ND445_13560 PF00266 Aminotransferase class-V ND445_13565 PF02082 Transcriptional regulator ND445_13570 PF00588 SpoU rRNA Methylase family ND445_13575 PF00459 Inositol monophosphatase family ND445_13580 PF03824 High-affinity nickel-transport protein ND445_13585 PF06226 Protein of unknown function (DUF1007) ND445_13590 PF00874 PRD domain ND445_13595 PF12832 MFS_1 like family ND445_13600 PF00464 Serine hydroxymethyltransferase ND445_13605 PF00970 Oxidoreductase FAD-binding domain ND445_13605 PF00042 Globin ND445_13605 PF00175 Oxidoreductase NAD-binding domain ND445_13610 PF14502 Helix-turn-helix domain ND445_13610 PF14503 YhfZ C-terminal domain ND445_13620 PF01168 Alanine racemase, N-terminal domain ND445_13625 PF02126 Phosphotriesterase family ND445_13630 PF10941 Protein of unknown function DUF2620 ND445_13635 PF10797 Protein of unknown function ND445_13640 PF00543 Nitrogen regulatory protein P-II ND445_13645 PF00795 Carbon-nitrogen hydrolase ND445_13645 PF02540 NAD synthase ND445_13650 PF00072 Response regulator receiver domain ND445_13650 PF00158 Sigma-54 interaction domain ND445_13655 PF13942 YfhG lipoprotein ND445_13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_13660 PF00512 His Kinase A (phospho-acceptor) domain ND445_13670 PF02769 AIR synthase related protein, C-terminal domain ND445_13670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND445_13670 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND445_13675 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND445_13675 PF01464 Transglycosylase SLT domain ND445_13680 PF14437 MafB19-like deaminase ND445_13690 PF00367 phosphotransferase system, EIIB ND445_13690 PF02378 Phosphotransferase system, EIIC ND445_13695 PF01380 SIS domain ND445_13700 PF01418 Helix-turn-helix domain, rpiR family ND445_13700 PF01380 SIS domain ND445_13705 PF12838 4Fe-4S dicluster domain ND445_13710 PF01648 4'-phosphopantetheinyl transferase superfamily ND445_13715 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND445_13720 PF02565 Recombination protein O C terminal ND445_13720 PF11967 Recombination protein O N terminal ND445_13725 PF07650 KH domain ND445_13725 PF01926 50S ribosome-binding GTPase ND445_13730 PF14622 Ribonuclease-III-like ND445_13730 PF00035 Double-stranded RNA binding motif ND445_13735 PF10502 Signal peptidase, peptidase S26 ND445_13740 PF06421 GTP-binding protein LepA C-terminus ND445_13740 PF03144 Elongation factor Tu domain 2 ND445_13740 PF00009 Elongation factor Tu GTP binding domain ND445_13740 PF00679 Elongation factor G C-terminus ND445_13750 PF03888 MucB/RseB N-terminal domain ND445_13750 PF17188 MucB/RseB C-terminal domain ND445_13755 PF03873 Anti sigma-E protein RseA, C-terminal domain ND445_13755 PF03872 Anti sigma-E protein RseA, N-terminal domain ND445_13760 PF08281 Sigma-70, region 4 ND445_13760 PF04542 Sigma-70 region 2 ND445_13765 PF00890 FAD binding domain ND445_13765 PF02910 Fumarate reductase flavoprotein C-term ND445_13770 PF05175 Methyltransferase small domain ND445_13775 PF00270 DEAD/DEAH box helicase ND445_13775 PF00271 Helicase conserved C-terminal domain ND445_13780 PF12796 Ankyrin repeats (3 copies) ND445_13790 PF01228 Glycine radical ND445_13795 PF03167 Uracil DNA glycosylase superfamily ND445_13800 PF01025 GrpE ND445_13805 PF01513 ATP-NAD kinase ND445_13810 PF02463 RecF/RecN/SMC N terminal domain ND445_13815 PF04355 SmpA / OmlA family ND445_13820 PF03658 RnfH family Ubiquitin ND445_13825 PF03364 Polyketide cyclase / dehydrase and lipid transport ND445_13830 PF01668 SmpB protein ND445_13840 PF00589 Phage integrase family ND445_13840 PF13356 Arm DNA-binding domain ND445_13870 PF01926 50S ribosome-binding GTPase ND445_13875 PF13280 WYL domain ND445_13875 PF08220 DeoR-like helix-turn-helix domain ND445_13900 PF06067 Domain of unknown function (DUF932) ND445_13905 PF03230 Antirestriction protein ND445_13910 PF04002 RadC-like JAB domain ND445_13915 PF06174 Protein of unknown function (DUF987) ND445_13920 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND445_13925 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND445_13965 PF02753 Pili assembly chaperone PapD, C-terminal domain ND445_13965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND445_13970 PF13953 PapC C-terminal domain ND445_13970 PF13954 PapC N-terminal domain ND445_13970 PF00577 Outer membrane usher protein ND445_13995 PF03466 LysR substrate binding domain ND445_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14010 PF01527 Transposase ND445_14020 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND445_14020 PF18413 Neuraminidase-like domain ND445_14020 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND445_14020 PF18413 Neuraminidase-like domain ND445_14030 PF03534 Salmonella virulence plasmid 65kDa B protein ND445_14030 PF12255 Insecticide toxin TcdB middle/C-terminal region ND445_14030 PF12256 Insecticide toxin TcdB middle/N-terminal region ND445_14035 PF14431 YwqJ-like deaminase ND445_14035 PF18807 Tripartite Tc toxins repeat ND445_14065 PF00571 CBS domain ND445_14065 PF01380 SIS domain ND445_14070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND445_14070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND445_14080 PF02653 Branched-chain amino acid transport system / permease component ND445_14085 PF00005 ABC transporter ND445_14095 PF00561 alpha/beta hydrolase fold ND445_14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14100 PF03466 LysR substrate binding domain ND445_14105 PF02652 L-lactate permease ND445_14110 PF01070 FMN-dependent dehydrogenase ND445_14115 PF06039 Malate:quinone oxidoreductase (Mqo) ND445_14120 PF00313 'Cold-shock' DNA-binding domain ND445_14130 PF06711 Protein of unknown function (DUF1198) ND445_14135 PF09400 Protein of unknown function (DUF2002) ND445_14150 PF07972 NrdI Flavodoxin like ND445_14155 PF02867 Ribonucleotide reductase, barrel domain ND445_14155 PF00317 Ribonucleotide reductase, all-alpha domain ND445_14155 PF08343 Ribonucleotide reductase N-terminal ND445_14160 PF00268 Ribonucleotide reductase, small chain ND445_14165 PF00005 ABC transporter ND445_14165 PF00571 CBS domain ND445_14170 PF00528 Binding-protein-dependent transport system inner membrane component ND445_14175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND445_14185 PF07690 Major Facilitator Superfamily ND445_14190 PF01047 MarR family ND445_14200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND445_14200 PF00529 HlyD membrane-fusion protein of T1SS ND445_14205 PF07690 Major Facilitator Superfamily ND445_14210 PF00588 SpoU rRNA Methylase family ND445_14210 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND445_14215 PF00085 Thioredoxin ND445_14220 PF03942 DTW domain ND445_14225 PF00583 Acetyltransferase (GNAT) family ND445_14225 PF13380 CoA binding domain ND445_14225 PF13607 Succinyl-CoA ligase like flavodoxin domain ND445_14230 PF13091 PLD-like domain ND445_14235 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND445_14265 PF00005 ABC transporter ND445_14265 PF09383 NIL domain ND445_14270 PF00528 Binding-protein-dependent transport system inner membrane component ND445_14275 PF03180 NLPA lipoprotein ND445_14280 PF16358 RcsF lipoprotein ND445_14285 PF01980 tRNA-methyltransferase O ND445_14285 PF18389 TrmO C-terminal domain ND445_14290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND445_14290 PF04073 Aminoacyl-tRNA editing domain ND445_14290 PF03129 Anticodon binding domain ND445_14295 PF04170 NlpE N-terminal domain ND445_14295 PF17185 NlpE C-terminal OB domain ND445_14300 PF00472 RF-1 domain ND445_14305 PF07152 YaeQ protein ND445_14310 PF06786 Uncharacterised protein family (UPF0253) ND445_14315 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND445_14320 PF00034 Cytochrome c ND445_14325 PF01171 PP-loop family ND445_14325 PF09179 TilS substrate binding domain ND445_14325 PF11734 TilS substrate C-terminal domain ND445_14330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND445_14345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND445_14350 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND445_14350 PF01336 OB-fold nucleic acid binding domain ND445_14350 PF02811 PHP domain ND445_14350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND445_14350 PF14579 Helix-hairpin-helix motif ND445_14355 PF01351 Ribonuclease HII ND445_14360 PF02684 Lipid-A-disaccharide synthetase ND445_14365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND445_14365 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_14370 PF07977 FabA-like domain ND445_14375 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_14375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND445_14380 PF03938 Outer membrane protein (OmpH-like) ND445_14385 PF01103 Surface antigen ND445_14385 PF07244 Surface antigen variable number repeat ND445_14390 PF17820 PDZ domain ND445_14390 PF02163 Peptidase family M50 ND445_14400 PF01255 Putative undecaprenyl diphosphate synthase ND445_14405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND445_14405 PF13288 DXP reductoisomerase C-terminal domain ND445_14405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND445_14410 PF01765 Ribosome recycling factor ND445_14415 PF00696 Amino acid kinase family ND445_14420 PF00889 Elongation factor TS ND445_14425 PF00318 Ribosomal protein S2 ND445_14430 PF00557 Metallopeptidase family M24 ND445_14435 PF01842 ACT domain ND445_14435 PF08335 GlnD PII-uridylyltransferase ND445_14435 PF01966 HD domain ND445_14435 PF01909 Nucleotidyltransferase domain ND445_14440 PF00132 Bacterial transferase hexapeptide (six repeats) ND445_14440 PF14602 Hexapeptide repeat of succinyl-transferase ND445_14440 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND445_14445 PF11944 Protein of unknown function (DUF3461) ND445_14450 PF00258 Flavodoxin ND445_14455 PF00849 RNA pseudouridylate synthase ND445_14460 PF04287 tRNA pseudouridine synthase C ND445_14465 PF07348 Syd protein (SUKH-2) ND445_14470 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND445_14470 PF14489 QueF-like protein ND445_14475 PF03641 Possible lysine decarboxylase ND445_14475 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND445_14475 PF11892 Domain of unknown function (DUF3412) ND445_14480 PF01367 5'-3' exonuclease, C-terminal SAM fold ND445_14480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND445_14485 PF01728 FtsJ-like methyltransferase ND445_14485 PF18125 RlmM ferredoxin-like domain ND445_14490 PF04241 Protein of unknown function (DUF423) ND445_14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14495 PF03466 LysR substrate binding domain ND445_14500 PF06004 Bacterial protein of unknown function (DUF903) ND445_14505 PF00266 Aminotransferase class-V ND445_14510 PF02657 Fe-S metabolism associated domain ND445_14515 PF00899 ThiF family ND445_14520 PF06725 3D domain ND445_14520 PF03562 MltA specific insert domain ND445_14540 PF01520 N-acetylmuramoyl-L-alanine amidase ND445_14540 PF11741 AMIN domain ND445_14545 PF00583 Acetyltransferase (GNAT) family ND445_14545 PF00696 Amino acid kinase family ND445_14550 PF13538 UvrD-like helicase C-terminal domain ND445_14555 PF13361 UvrD-like helicase C-terminal domain ND445_14555 PF12705 PD-(D/E)XK nuclease superfamily ND445_14555 PF00580 UvrD/REP helicase N-terminal domain ND445_14560 PF00675 Insulinase (Peptidase family M16) ND445_14560 PF05193 Peptidase M16 inactive domain ND445_14560 PF16187 Middle or third domain of peptidase_M16 ND445_14565 PF17946 RecC C-terminal domain ND445_14570 PF07963 Prokaryotic N-terminal methylation motif ND445_14570 PF12528 Type II secretion prepilin peptidase dependent protein C ND445_14585 PF07963 Prokaryotic N-terminal methylation motif ND445_14585 PF00114 Pilin (bacterial filament) ND445_14590 PF00303 Thymidylate synthase ND445_14595 PF01790 Prolipoprotein diacylglyceryl transferase ND445_14600 PF01590 GAF domain ND445_14600 PF00391 PEP-utilising enzyme, mobile domain ND445_14600 PF02896 PEP-utilising enzyme, TIM barrel domain ND445_14600 PF05524 PEP-utilising enzyme, N-terminal ND445_14605 PF00293 NUDIX domain ND445_14610 PF02976 DNA mismatch repair enzyme MutH ND445_14615 PF03741 Integral membrane protein TerC family ND445_14620 PF00248 Aldo/keto reductase family ND445_14625 PF07690 Major Facilitator Superfamily ND445_14630 PF01553 Acyltransferase ND445_14630 PF00501 AMP-binding enzyme ND445_14630 PF13193 AMP-binding enzyme C-terminal domain ND445_14635 PF00356 Bacterial regulatory proteins, lacI family ND445_14640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND445_14640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND445_14645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14645 PF03466 LysR substrate binding domain ND445_14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14650 PF03466 LysR substrate binding domain ND445_14690 PF07963 Prokaryotic N-terminal methylation motif ND445_14690 PF11612 Type II secretion system (T2SS), protein J ND445_14695 PF02501 Type II secretion system (T2SS), protein I ND445_14695 PF07963 Prokaryotic N-terminal methylation motif ND445_14705 PF08334 Type II secretion system (T2SS), protein G ND445_14705 PF07963 Prokaryotic N-terminal methylation motif ND445_14710 PF00482 Type II secretion system (T2SS), protein F ND445_14715 PF00437 Type II/IV secretion system protein ND445_14720 PF03958 Bacterial type II/III secretion system short domain ND445_14720 PF00263 Bacterial type II and III secretion system protein ND445_14745 PF00005 ABC transporter ND445_14750 PF02405 Permease MlaE ND445_14760 PF00152 tRNA synthetases class II (D, K and N) ND445_14760 PF01336 OB-fold nucleic acid binding domain ND445_14770 PF02272 DHHA1 domain ND445_14770 PF17768 RecJ OB domain ND445_14770 PF01368 DHH family ND445_14775 PF13098 Thioredoxin-like domain ND445_14775 PF10411 Disulfide bond isomerase protein N-terminus ND445_14780 PF00589 Phage integrase family ND445_14780 PF02899 Phage integrase, N-terminal SAM-like domain ND445_14785 PF00258 Flavodoxin ND445_14790 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND445_14795 PF03937 Flavinator of succinate dehydrogenase ND445_14800 PF01571 Aminomethyltransferase folate-binding domain ND445_14805 PF03006 Haemolysin-III related ND445_14815 PF02347 Glycine cleavage system P-protein ND445_14820 PF01597 Glycine cleavage H-protein ND445_14825 PF01571 Aminomethyltransferase folate-binding domain ND445_14825 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND445_14830 PF01494 FAD binding domain ND445_14835 PF01494 FAD binding domain ND445_14840 PF05195 Aminopeptidase P, N-terminal domain ND445_14840 PF00557 Metallopeptidase family M24 ND445_14845 PF03695 Uncharacterised protein family (UPF0149) ND445_14850 PF05164 Cell division protein ZapA ND445_14860 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND445_14865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND445_14865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND445_14865 PF01842 ACT domain ND445_14870 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND445_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_14875 PF03466 LysR substrate binding domain ND445_14880 PF04402 Protein of unknown function (DUF541) ND445_14885 PF01810 LysE type translocator ND445_14890 PF00924 Mechanosensitive ion channel ND445_14890 PF05552 Conserved TM helix ND445_14895 PF01116 Fructose-bisphosphate aldolase class-II ND445_14900 PF00162 Phosphoglycerate kinase ND445_14905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND445_14905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND445_14910 PF02779 Transketolase, pyrimidine binding domain ND445_14910 PF02780 Transketolase, C-terminal domain ND445_14910 PF00456 Transketolase, thiamine diphosphate binding domain ND445_14920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND445_14920 PF17810 Arginine decarboxylase helical bundle domain ND445_14920 PF17944 Arginine decarboxylase C-terminal helical extension ND445_14925 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND445_14925 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND445_14925 PF02772 S-adenosylmethionine synthetase, central domain ND445_14935 PF04143 Sulphur transport ND445_14945 PF10263 SprT-like family ND445_14945 PF17283 SprT-like zinc ribbon domain ND445_14950 PF04231 Endonuclease I ND445_14955 PF04452 RNA methyltransferase ND445_14960 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND445_14960 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND445_14965 PF02622 Uncharacterized ACR, COG1678 ND445_14970 PF03652 Holliday junction resolvase ND445_14975 PF00795 Carbon-nitrogen hydrolase ND445_14980 PF04371 Porphyromonas-type peptidyl-arginine deiminase ND445_14985 PF00437 Type II/IV secretion system protein ND445_14990 PF01168 Alanine racemase, N-terminal domain ND445_14995 PF03807 NADP oxidoreductase coenzyme F420-dependent ND445_14995 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND445_15000 PF02325 YGGT family ND445_15005 PF02594 Uncharacterised ACR, YggU family COG1872 ND445_15010 PF01725 Ham1 family ND445_15015 PF06969 HemN C-terminal domain ND445_15015 PF04055 Radical SAM superfamily ND445_15020 PF11101 Protein of unknown function (DUF2884) ND445_15025 PF04960 Glutaminase ND445_15030 PF04320 Protein with unknown function (DUF469) ND445_15035 PF02390 Putative methyltransferase ND445_15040 PF10576 Iron-sulfur binding domain of endonuclease III ND445_15040 PF00633 Helix-hairpin-helix motif ND445_15040 PF00730 HhH-GPD superfamily base excision DNA repair protein ND445_15040 PF14815 NUDIX domain ND445_15045 PF04362 Bacterial Fe(2+) trafficking ND445_15050 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND445_15050 PF01464 Transglycosylase SLT domain ND445_15095 PF00294 pfkB family carbohydrate kinase ND445_15100 PF01228 Glycine radical ND445_15100 PF02901 Pyruvate formate lyase-like ND445_15105 PF00871 Acetokinase family ND445_15110 PF01490 Transmembrane amino acid transporter protein ND445_15115 PF00291 Pyridoxal-phosphate dependent enzyme ND445_15120 PF00501 AMP-binding enzyme ND445_15120 PF00668 Condensation domain ND445_15120 PF00550 Phosphopantetheine attachment site ND445_15120 PF00975 Thioesterase domain ND445_15120 PF13193 AMP-binding enzyme C-terminal domain ND445_15130 PF00857 Isochorismatase family ND445_15130 PF00550 Phosphopantetheine attachment site ND445_15135 PF13193 AMP-binding enzyme C-terminal domain ND445_15135 PF00501 AMP-binding enzyme ND445_15140 PF00425 chorismate binding enzyme ND445_15145 PF01497 Periplasmic binding protein ND445_15150 PF05977 Transmembrane secretion effector ND445_15155 PF01032 FecCD transport family ND445_15160 PF01032 FecCD transport family ND445_15165 PF00005 ABC transporter ND445_15175 PF00501 AMP-binding enzyme ND445_15175 PF00668 Condensation domain ND445_15175 PF00550 Phosphopantetheine attachment site ND445_15175 PF00975 Thioesterase domain ND445_15175 PF13193 AMP-binding enzyme C-terminal domain ND445_15180 PF03621 MbtH-like protein ND445_15185 PF11806 Domain of unknown function (DUF3327) ND445_15185 PF00756 Putative esterase ND445_15190 PF07715 TonB-dependent Receptor Plug Domain ND445_15190 PF00593 TonB dependent receptor ND445_15195 PF08501 Shikimate dehydrogenase substrate binding domain ND445_15220 PF04972 BON domain ND445_15220 PF00263 Bacterial type II and III secretion system protein ND445_15220 PF13629 Pilus formation protein N terminal region ND445_15240 PF00437 Type II/IV secretion system protein ND445_15280 PF02472 Biopolymer transport protein ExbD/TolR ND445_15285 PF01618 MotA/TolQ/ExbB proton channel family ND445_15290 PF01053 Cys/Met metabolism PLP-dependent enzyme ND445_15295 PF09335 SNARE associated Golgi protein ND445_15300 PF12833 Helix-turn-helix domain ND445_15300 PF06719 AraC-type transcriptional regulator N-terminus ND445_15305 PF00465 Iron-containing alcohol dehydrogenase ND445_15310 PF00248 Aldo/keto reductase family ND445_15315 PF11842 Domain of unknown function (DUF3362) ND445_15315 PF04055 Radical SAM superfamily ND445_15315 PF08497 Radical SAM N-terminal ND445_15320 PF07732 Multicopper oxidase ND445_15320 PF07731 Multicopper oxidase ND445_15325 PF01553 Acyltransferase ND445_15330 PF00521 DNA gyrase/topoisomerase IV, subunit A ND445_15330 PF03989 DNA gyrase C-terminal domain, beta-propeller ND445_15335 PF02525 Flavodoxin-like fold ND445_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_15340 PF03466 LysR substrate binding domain ND445_15345 PF00204 DNA gyrase B ND445_15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_15345 PF01751 Toprim domain ND445_15345 PF00986 DNA gyrase B subunit, carboxyl terminus ND445_15350 PF05728 Uncharacterised protein family (UPF0227) ND445_15355 PF00149 Calcineurin-like phosphoesterase ND445_15360 PF06853 Protein of unknown function (DUF1249) ND445_15365 PF00293 NUDIX domain ND445_15370 PF02321 Outer membrane efflux protein ND445_15375 PF06693 Protein of unknown function (DUF1190) ND445_15380 PF03738 Glutathionylspermidine synthase preATP-grasp ND445_15385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND445_15390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND445_15395 PF04380 Membrane fusogenic activity ND445_15405 PF01467 Cytidylyltransferase-like ND445_15405 PF00294 pfkB family carbohydrate kinase ND445_15410 PF03710 Glutamate-ammonia ligase adenylyltransferase ND445_15410 PF08335 GlnD PII-uridylyltransferase ND445_15415 PF01928 CYTH domain ND445_15420 PF08239 Bacterial SH3 domain ND445_15425 PF01966 HD domain ND445_15425 PF01743 Poly A polymerase head domain ND445_15425 PF12627 Probable RNA and SrmB- binding site of polymerase A ND445_15430 PF02673 Bacitracin resistance protein BacA ND445_15435 PF02152 Dihydroneopterin aldolase ND445_15440 PF02660 Glycerol-3-phosphate acyltransferase ND445_15445 PF00814 Glycoprotease family ND445_15450 PF01165 Ribosomal protein S21 ND445_15455 PF10410 DnaB-helicase binding domain of primase ND445_15455 PF08278 DNA primase DnaG DnaB-binding ND445_15455 PF08275 DNA primase catalytic core, N-terminal domain ND445_15455 PF01807 CHC2 zinc finger ND445_15460 PF04546 Sigma-70, non-essential region ND445_15460 PF03979 Sigma-70 factor, region 1.1 ND445_15460 PF00140 Sigma-70 factor, region 1.2 ND445_15460 PF04542 Sigma-70 region 2 ND445_15460 PF04539 Sigma-70 region 3 ND445_15460 PF04545 Sigma-70, region 4 ND445_15485 PF00106 short chain dehydrogenase ND445_15510 PF08241 Methyltransferase domain ND445_15515 PF00535 Glycosyl transferase family 2 ND445_15550 PF13018 Extended Signal Peptide of Type V secretion system ND445_15550 PF13332 Hemagglutinin repeat ND445_15550 PF05860 haemagglutination activity domain ND445_15550 PF04829 Pre-toxin domain with VENN motif ND445_15555 PF13018 Extended Signal Peptide of Type V secretion system ND445_15555 PF13332 Hemagglutinin repeat ND445_15555 PF05860 haemagglutination activity domain ND445_15555 PF04829 Pre-toxin domain with VENN motif ND445_15565 PF08479 POTRA domain, ShlB-type ND445_15565 PF17287 POTRA domain ND445_15565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND445_15570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND445_15570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_15575 PF05175 Methyltransferase small domain ND445_15585 PF01863 Protein of unknown function DUF45 ND445_15590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND445_15595 PF03741 Integral membrane protein TerC family ND445_15600 PF00375 Sodium:dicarboxylate symporter family ND445_15605 PF10688 Bacterial inner membrane protein ND445_15610 PF08666 SAF domain ND445_15610 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND445_15615 PF08125 Mannitol dehydrogenase C-terminal domain ND445_15615 PF01232 Mannitol dehydrogenase Rossmann domain ND445_15620 PF02614 Glucuronate isomerase ND445_15625 PF07690 Major Facilitator Superfamily ND445_15630 PF07729 FCD domain ND445_15630 PF00392 Bacterial regulatory proteins, gntR family ND445_15640 PF09335 SNARE associated Golgi protein ND445_15645 PF13721 SecD export protein N-terminal TM region ND445_15655 PF05957 Bacterial protein of unknown function (DUF883) ND445_15660 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND445_15665 PF13997 YqjK-like protein ND445_15670 PF07681 DoxX ND445_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_15675 PF03466 LysR substrate binding domain ND445_15680 PF02678 Pirin ND445_15680 PF17954 Quercetinase C-terminal cupin domain ND445_15695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND445_15700 PF04348 LppC putative lipoprotein ND445_15705 PF02021 Uncharacterised protein family UPF0102 ND445_15710 PF13580 SIS domain ND445_15715 PF04972 BON domain ND445_15720 PF00912 Transglycosylase ND445_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND445_15730 PF00512 His Kinase A (phospho-acceptor) domain ND445_15730 PF01627 Hpt domain ND445_15730 PF00989 PAS fold ND445_15730 PF00072 Response regulator receiver domain ND445_15730 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND445_15735 PF04055 Radical SAM superfamily ND445_15735 PF16199 Radical_SAM C-terminal domain ND445_15740 PF00310 Glutamine amidotransferases class-II ND445_15740 PF04898 Glutamate synthase central domain ND445_15740 PF01493 GXGXG motif ND445_15740 PF01645 Conserved region in glutamate synthase ND445_15745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_15745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND445_15755 PF04386 Stringent starvation protein B ND445_15760 PF02798 Glutathione S-transferase, N-terminal domain ND445_15760 PF00043 Glutathione S-transferase, C-terminal domain ND445_15765 PF00380 Ribosomal protein S9/S16 ND445_15770 PF00572 Ribosomal protein L13 ND445_15775 PF03969 AFG1-like ATPase ND445_15780 PF06295 Protein of unknown function (DUF1043) ND445_15785 PF00595 PDZ domain ND445_15785 PF13180 PDZ domain ND445_15790 PF13180 PDZ domain ND445_15795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND445_15800 PF01722 BolA-like protein ND445_15805 PF13466 STAS domain ND445_15810 PF05494 MlaC protein ND445_15815 PF02470 MlaD protein ND445_15820 PF02405 Permease MlaE ND445_15825 PF00005 ABC transporter ND445_15830 PF01699 Sodium/calcium exchanger protein ND445_15835 PF00571 CBS domain ND445_15835 PF01380 SIS domain ND445_15845 PF06835 Lipopolysaccharide-assembly, LptC-related ND445_15850 PF03968 OstA-like protein ND445_15855 PF00005 ABC transporter ND445_15855 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND445_15860 PF04963 Sigma-54 factor, core binding domain ND445_15860 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND445_15860 PF04552 Sigma-54, DNA binding domain ND445_15865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND445_15870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND445_15875 PF03668 P-loop ATPase protein family ND445_15880 PF00381 PTS HPr component phosphorylation site ND445_15885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND445_15885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND445_15890 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND445_15890 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND445_15895 PF01042 Endoribonuclease L-PSP ND445_15900 PF00128 Alpha amylase, catalytic domain ND445_15900 PF11941 Domain of unknown function (DUF3459) ND445_15905 PF00367 phosphotransferase system, EIIB ND445_15905 PF02378 Phosphotransferase system, EIIC ND445_15910 PF00356 Bacterial regulatory proteins, lacI family ND445_15915 PF00689 Cation transporting ATPase, C-terminus ND445_15915 PF00690 Cation transporter/ATPase, N-terminus ND445_15925 PF01272 Transcription elongation factor, GreA/GreB, C-term ND445_15925 PF14760 Rnk N-terminus ND445_15930 PF07361 Cytochrome b562 ND445_15935 PF01523 Putative modulator of DNA gyrase ND445_15940 PF04751 Protein of unknown function (DUF615) ND445_15945 PF01337 Barstar (barnase inhibitor) ND445_15950 PF00545 ribonuclease ND445_15955 PF00171 Aldehyde dehydrogenase family ND445_15960 PF04632 Fusaric acid resistance protein family ND445_15965 PF13533 Biotin-lipoyl like ND445_15970 PF07869 Protein of unknown function (DUF1656) ND445_15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_15975 PF03466 LysR substrate binding domain ND445_15980 PF01523 Putative modulator of DNA gyrase ND445_15985 PF00795 Carbon-nitrogen hydrolase ND445_15990 PF13502 AsmA-like C-terminal region ND445_15990 PF13116 Protein of unknown function ND445_15995 PF10150 Ribonuclease E/G family ND445_15995 PF00575 S1 RNA binding domain ND445_16000 PF02545 Maf-like protein ND445_16005 PF04093 rod shape-determining protein MreD ND445_16010 PF04085 rod shape-determining protein MreC ND445_16020 PF00990 Diguanylate cyclase, GGDEF domain ND445_16020 PF00563 EAL domain ND445_16020 PF17157 Gammaproteobacterial periplasmic sensor domain ND445_16025 PF08240 Alcohol dehydrogenase GroES-like domain ND445_16025 PF00107 Zinc-binding dehydrogenase ND445_16030 PF00174 Oxidoreductase molybdopterin binding domain ND445_16035 PF01794 Ferric reductase like transmembrane component ND445_16040 PF01220 Dehydroquinase class II ND445_16045 PF00364 Biotin-requiring enzyme ND445_16050 PF02785 Biotin carboxylase C-terminal domain ND445_16050 PF00289 Biotin carboxylase, N-terminal domain ND445_16050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND445_16055 PF06196 Protein of unknown function (DUF997) ND445_16060 PF00474 Sodium:solute symporter family ND445_16070 PF01207 Dihydrouridine synthase (Dus) ND445_16075 PF02954 Bacterial regulatory protein, Fis family ND445_16085 PF03279 Bacterial lipid A biosynthesis acyltransferase ND445_16090 PF00484 Carbonic anhydrase ND445_16095 PF04172 LrgB-like family ND445_16100 PF03788 LrgA family ND445_16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_16105 PF03466 LysR substrate binding domain ND445_16110 PF00999 Sodium/hydrogen exchanger family ND445_16115 PF00860 Permease family ND445_16125 PF00436 Single-strand binding protein family ND445_16130 PF00005 ABC transporter ND445_16130 PF17755 UvrA DNA-binding domain ND445_16130 PF17760 UvrA interaction domain ND445_16135 PF04237 YjbR ND445_16140 PF00155 Aminotransferase class I and II ND445_16145 PF01168 Alanine racemase, N-terminal domain ND445_16145 PF00842 Alanine racemase, C-terminal domain ND445_16150 PF00772 DnaB-like helicase N terminal domain ND445_16150 PF03796 DnaB-like helicase C terminal domain ND445_16155 PF08240 Alcohol dehydrogenase GroES-like domain ND445_16155 PF00107 Zinc-binding dehydrogenase ND445_16160 PF09583 Phage shock protein G (Phageshock_PspG) ND445_16165 PF01207 Dihydrouridine synthase (Dus) ND445_16170 PF01475 Ferric uptake regulator family ND445_16175 PF01726 LexA DNA binding domain ND445_16175 PF00717 Peptidase S24-like ND445_16180 PF01219 Prokaryotic diacylglycerol kinase ND445_16185 PF01553 Acyltransferase ND445_16190 PF01040 UbiA prenyltransferase family ND445_16195 PF04345 Chorismate lyase ND445_16200 PF07148 Maltose operon periplasmic protein precursor (MalM) ND445_16205 PF02264 LamB porin ND445_16210 PF00005 ABC transporter ND445_16210 PF17912 MalK OB fold domain ND445_16220 PF01547 Bacterial extracellular solute-binding protein ND445_16225 PF00528 Binding-protein-dependent transport system inner membrane component ND445_16225 PF14785 Maltose transport system permease protein MalF P2 domain ND445_16230 PF00528 Binding-protein-dependent transport system inner membrane component ND445_16235 PF06146 Phosphate-starvation-inducible E ND445_16240 PF00342 Phosphoglucose isomerase ND445_16245 PF01842 ACT domain ND445_16245 PF00696 Amino acid kinase family ND445_16250 PF08479 POTRA domain, ShlB-type ND445_16250 PF17287 POTRA domain ND445_16250 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND445_16255 PF05860 haemagglutination activity domain ND445_16255 PF13332 Hemagglutinin repeat ND445_16260 PF00872 Transposase, Mutator family ND445_16265 PF02369 Bacterial Ig-like domain (group 1) ND445_16265 PF11924 Inverse autotransporter, beta-domain ND445_16265 PF07979 Intimin C-type lectin domain ND445_16265 PF09134 Invasin, domain 3 ND445_16270 PF00872 Transposase, Mutator family ND445_16275 PF09134 Invasin, domain 3 ND445_16275 PF02369 Bacterial Ig-like domain (group 1) ND445_16275 PF11924 Inverse autotransporter, beta-domain ND445_16275 PF07979 Intimin C-type lectin domain ND445_16285 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND445_16295 PF00004 ATPase family associated with various cellular activities (AAA) ND445_16295 PF17862 AAA+ lid domain ND445_16295 PF01434 Peptidase family M41 ND445_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_16375 PF03466 LysR substrate binding domain ND445_16395 PF02310 B12 binding domain ND445_16395 PF02607 B12 binding domain ND445_16395 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND445_16395 PF00809 Pterin binding enzyme ND445_16395 PF02574 Homocysteine S-methyltransferase ND445_16400 PF09339 IclR helix-turn-helix domain ND445_16400 PF01614 Bacterial transcriptional regulator ND445_16405 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND445_16410 PF00463 Isocitrate lyase family ND445_16415 PF01274 Malate synthase ND445_16420 PF04204 Homoserine O-succinyltransferase ND445_16455 PF01808 AICARFT/IMPCHase bienzyme ND445_16455 PF02142 MGS-like domain ND445_16460 PF02844 Phosphoribosylglycinamide synthetase, N domain ND445_16460 PF02843 Phosphoribosylglycinamide synthetase, C domain ND445_16460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND445_16465 PF07356 Protein of unknown function (DUF1481) ND445_16470 PF00216 Bacterial DNA-binding protein ND445_16475 PF04222 Protein of unknown function (DUF416) ND445_16480 PF04493 Endonuclease V ND445_16485 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND445_16490 PF00293 NUDIX domain ND445_16490 PF09297 NADH pyrophosphatase zinc ribbon domain ND445_16495 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND445_16500 PF13667 ThiC-associated domain ND445_16500 PF01964 Radical SAM ThiC family ND445_16505 PF02581 Thiamine monophosphate synthase ND445_16510 PF00899 ThiF family ND445_16515 PF02597 ThiS family ND445_16520 PF05690 Thiazole biosynthesis protein ThiG ND445_16525 PF04055 Radical SAM superfamily ND445_16525 PF06968 Biotin and Thiamin Synthesis associated domain ND445_16530 PF04998 RNA polymerase Rpb1, domain 5 ND445_16530 PF05000 RNA polymerase Rpb1, domain 4 ND445_16530 PF04983 RNA polymerase Rpb1, domain 3 ND445_16530 PF00623 RNA polymerase Rpb1, domain 2 ND445_16530 PF04997 RNA polymerase Rpb1, domain 1 ND445_16535 PF04561 RNA polymerase Rpb2, domain 2 ND445_16535 PF04560 RNA polymerase Rpb2, domain 7 ND445_16535 PF00562 RNA polymerase Rpb2, domain 6 ND445_16535 PF10385 RNA polymerase beta subunit external 1 domain ND445_16535 PF04565 RNA polymerase Rpb2, domain 3 ND445_16535 PF04563 RNA polymerase beta subunit ND445_16540 PF16320 Ribosomal protein L7/L12 dimerisation domain ND445_16540 PF00542 Ribosomal protein L7/L12 C-terminal domain ND445_16545 PF00466 Ribosomal protein L10 ND445_16550 PF00687 Ribosomal protein L1p/L10e family ND445_16555 PF03946 Ribosomal protein L11, N-terminal domain ND445_16555 PF00298 Ribosomal protein L11, RNA binding domain ND445_16560 PF02357 Transcription termination factor nusG ND445_16560 PF00467 KOW motif ND445_16565 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND445_16570 PF03143 Elongation factor Tu C-terminal domain ND445_16570 PF03144 Elongation factor Tu domain 2 ND445_16570 PF00009 Elongation factor Tu GTP binding domain ND445_16595 PF00485 Phosphoribulokinase / Uridine kinase family ND445_16600 PF08279 HTH domain ND445_16600 PF03099 Biotin/lipoate A/B protein ligase family ND445_16600 PF02237 Biotin protein ligase C terminal domain ND445_16605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND445_16605 PF01565 FAD binding domain ND445_16630 PF12724 Flavodoxin domain ND445_16635 PF02386 Cation transport protein ND445_16640 PF01205 Uncharacterized protein family UPF0029 ND445_16640 PF09186 Domain of unknown function (DUF1949) ND445_16645 PF00557 Metallopeptidase family M24 ND445_16650 PF00378 Enoyl-CoA hydratase/isomerase ND445_16650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND445_16650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND445_16655 PF00108 Thiolase, N-terminal domain ND445_16655 PF02803 Thiolase, C-terminal domain ND445_16660 PF00175 Oxidoreductase NAD-binding domain ND445_16660 PF00970 Oxidoreductase FAD-binding domain ND445_16665 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND445_16675 PF02357 Transcription termination factor nusG ND445_16680 PF00490 Delta-aminolevulinic acid dehydratase ND445_16685 PF01026 TatD related DNase ND445_16690 PF00902 Sec-independent protein translocase protein (TatC) ND445_16700 PF02416 mttA/Hcf106 family ND445_16705 PF03109 ABC1 family ND445_16710 PF02036 SCP-2 sterol transfer family ND445_16715 PF01209 ubiE/COQ5 methyltransferase family ND445_16720 PF02646 RmuC family ND445_16725 PF09335 SNARE associated Golgi protein ND445_16730 PF13722 5TM C-terminal transporter carbon starvation CstA ND445_16730 PF02554 Carbon starvation protein CstA ND445_16740 PF01048 Phosphorylase superfamily ND445_16745 PF01738 Dienelactone hydrolase family ND445_16750 PF01717 Cobalamin-independent synthase, Catalytic domain ND445_16750 PF08267 Cobalamin-independent synthase, N-terminal domain ND445_16755 PF03466 LysR substrate binding domain ND445_16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_16760 PF00892 EamA-like transporter family ND445_16770 PF03009 Glycerophosphoryl diester phosphodiesterase family ND445_16775 PF17912 MalK OB fold domain ND445_16775 PF00005 ABC transporter ND445_16780 PF00528 Binding-protein-dependent transport system inner membrane component ND445_16785 PF00528 Binding-protein-dependent transport system inner membrane component ND445_16790 PF13416 Bacterial extracellular solute-binding protein ND445_16825 PF00005 ABC transporter ND445_16830 PF00005 ABC transporter ND445_16830 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND445_16835 PF02653 Branched-chain amino acid transport system / permease component ND445_16835 PF11862 Domain of unknown function (DUF3382) ND445_16840 PF02653 Branched-chain amino acid transport system / permease component ND445_16845 PF13458 Periplasmic binding protein ND445_16850 PF12568 Acetyltransferase (GNAT) domain, PanZ ND445_16855 PF02595 Glycerate kinase family ND445_16860 PF02447 GntP family permease ND445_16865 PF17853 GGDEF-like domain ND445_16865 PF13556 PucR C-terminal helix-turn-helix domain ND445_16865 PF05651 Putative sugar diacid recognition ND445_16870 PF04542 Sigma-70 region 2 ND445_16870 PF04545 Sigma-70, region 4 ND445_16870 PF00140 Sigma-70 factor, region 1.2 ND445_16875 PF02687 FtsX-like permease family ND445_16875 PF18075 FtsX extracellular domain ND445_16880 PF00005 ABC transporter ND445_16885 PF00448 SRP54-type protein, GTPase domain ND445_16885 PF00448 SRP54-type protein, GTPase domain ND445_16885 PF02881 SRP54-type protein, helical bundle domain ND445_16885 PF02881 SRP54-type protein, helical bundle domain ND445_16895 PF06611 Protein of unknown function (DUF1145) ND445_16910 PF07947 YhhN family ND445_16915 PF00403 Heavy-metal-associated domain ND445_16920 PF01206 Sulfurtransferase TusA ND445_16925 PF02592 Putative vitamin uptake transporter ND445_16930 PF08786 DcrB ND445_16935 PF13183 4Fe-4S dicluster domain ND445_16935 PF02754 Cysteine-rich domain ND445_16940 PF00890 FAD binding domain ND445_16945 PF04324 BFD-like [2Fe-2S] binding domain ND445_16945 PF01266 FAD dependent oxidoreductase ND445_16955 PF07690 Major Facilitator Superfamily ND445_16960 PF03009 Glycerophosphoryl diester phosphodiesterase family ND445_16970 PF12146 Serine aminopeptidase, S33 ND445_16975 PF01810 LysE type translocator ND445_16980 PF16124 RecQ zinc-binding ND445_16980 PF00570 HRDC domain ND445_16980 PF00271 Helicase conserved C-terminal domain ND445_16980 PF09382 RQC domain ND445_16980 PF00270 DEAD/DEAH box helicase ND445_16985 PF02253 Phospholipase A1 ND445_16990 PF03061 Thioesterase superfamily ND445_16995 PF00892 EamA-like transporter family ND445_17000 PF01544 CorA-like Mg2+ transporter protein ND445_17010 PF09370 Phosphoenolpyruvate hydrolase-like ND445_17025 PF13361 UvrD-like helicase C-terminal domain ND445_17025 PF00580 UvrD/REP helicase N-terminal domain ND445_17030 PF13419 Haloacid dehalogenase-like hydrolase ND445_17035 PF00589 Phage integrase family ND445_17035 PF02899 Phage integrase, N-terminal SAM-like domain ND445_17040 PF04340 Protein of unknown function, DUF484 ND445_17045 PF01678 Diaminopimelate epimerase ND445_17050 PF13627 Prokaryotic lipoprotein-attachment site ND445_17055 PF01491 Frataxin-like domain ND445_17060 PF01295 Adenylate cyclase, class-I ND445_17060 PF12633 Adenylate cyclase NT domain ND445_17065 PF03900 Porphobilinogen deaminase, C-terminal domain ND445_17065 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND445_17070 PF02602 Uroporphyrinogen-III synthase HemD ND445_17075 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND445_17080 PF07219 HemY protein N-terminus ND445_17080 PF07719 Tetratricopeptide repeat ND445_17110 PF00324 Amino acid permease ND445_17115 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND445_17120 PF06899 WzyE protein, O-antigen assembly polymerase ND445_17125 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND445_17130 PF01943 Polysaccharide biosynthesis protein ND445_17135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND445_17145 PF00483 Nucleotidyl transferase ND445_17150 PF16363 GDP-mannose 4,6 dehydratase ND445_17155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND445_17155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND445_17155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND445_17160 PF02350 UDP-N-acetylglucosamine 2-epimerase ND445_17165 PF02706 Chain length determinant protein ND445_17170 PF00953 Glycosyl transferase family 4 ND445_17175 PF07498 Rho termination factor, N-terminal domain ND445_17175 PF07497 Rho termination factor, RNA-binding domain ND445_17175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND445_17180 PF00085 Thioredoxin ND445_17185 PF00270 DEAD/DEAH box helicase ND445_17185 PF00271 Helicase conserved C-terminal domain ND445_17190 PF02541 Ppx/GppA phosphatase family ND445_17195 PF00580 UvrD/REP helicase N-terminal domain ND445_17195 PF13361 UvrD-like helicase C-terminal domain ND445_17205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND445_17205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND445_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_17210 PF03466 LysR substrate binding domain ND445_17215 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND445_17215 PF18416 N-acetylglucosamine binding protein domain 2 ND445_17220 PF00291 Pyridoxal-phosphate dependent enzyme ND445_17220 PF00585 C-terminal regulatory domain of Threonine dehydratase ND445_17225 PF00920 Dehydratase family ND445_17230 PF01063 Amino-transferase class IV ND445_17240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND445_17240 PF00205 Thiamine pyrophosphate enzyme, central domain ND445_17240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND445_17245 PF08046 IlvGEDA operon leader peptide ND445_17250 PF13335 Magnesium chelatase, subunit ChlI C-terminal ND445_17250 PF01078 Magnesium chelatase, subunit ChlI ND445_17255 PF04219 Protein of unknown function, DUF ND445_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_17260 PF03466 LysR substrate binding domain ND445_17310 PF01177 Asp/Glu/Hydantoin racemase ND445_17315 PF00593 TonB dependent receptor ND445_17315 PF07715 TonB-dependent Receptor Plug Domain ND445_17320 PF05958 tRNA (Uracil-5-)-methyltransferase ND445_17325 PF07226 Protein of unknown function (DUF1422) ND445_17330 PF00440 Bacterial regulatory proteins, tetR family ND445_17335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND445_17335 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_17340 PF03466 LysR substrate binding domain ND445_17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND445_17345 PF00462 Glutaredoxin ND445_17345 PF08534 Redoxin ND445_17350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND445_17350 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND445_17370 PF00529 HlyD membrane-fusion protein of T1SS ND445_17375 PF00664 ABC transporter transmembrane region ND445_17375 PF00005 ABC transporter ND445_17385 PF00593 TonB dependent receptor ND445_17385 PF07715 TonB-dependent Receptor Plug Domain ND445_17390 PF00206 Lyase ND445_17390 PF14698 Argininosuccinate lyase C-terminal ND445_17395 PF00764 Arginosuccinate synthase ND445_17400 PF00696 Amino acid kinase family ND445_17405 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND445_17405 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND445_17410 PF07687 Peptidase dimerisation domain ND445_17410 PF01546 Peptidase family M20/M25/M40 ND445_17415 PF00311 Phosphoenolpyruvate carboxylase ND445_17425 PF02219 Methylenetetrahydrofolate reductase ND445_17450 PF00239 Resolvase, N terminal domain ND445_17450 PF02796 Helix-turn-helix domain of resolvase ND445_17460 PF13614 AAA domain ND445_17465 PF06406 StbA protein ND445_17530 PF01381 Helix-turn-helix ND445_17555 PF03432 Relaxase/Mobilisation nuclease domain ND445_17555 PF18821 Large polyvalent protein-associated domain 7 ND445_17660 PF08401 Domain of unknown function (DUF1738) ND445_17660 PF13362 Toprim domain ND445_17660 PF18818 Metallopeptidase superfamily domain ND445_17670 PF00437 Type II/IV secretion system protein ND445_17695 PF13693 Winged helix-turn-helix DNA-binding ND445_17760 PF06252 Protein of unknown function (DUF1018) ND445_17815 PF06074 Protein of unknown function (DUF935) ND445_17840 PF10124 Mu-like prophage major head subunit gpT ND445_17865 PF17482 Phage tail sheath C-terminal domain ND445_17865 PF04984 Phage tail sheath protein subtilisin-like domain ND445_17915 PF08400 Prophage tail fibre N-terminal ND445_17915 PF07484 Phage Tail Collar Domain ND445_17915 PF03335 Phage tail fibre repeat ND445_17920 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND445_17925 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND445_17930 PF02796 Helix-turn-helix domain of resolvase ND445_17930 PF00239 Resolvase, N terminal domain ND445_17935 PF04917 Bacterial shufflon protein, N-terminal constant region ND445_17945 PF01464 Transglycosylase SLT domain ND445_17960 PF00437 Type II/IV secretion system protein ND445_18045 PF02796 Helix-turn-helix domain of resolvase ND445_18045 PF00239 Resolvase, N terminal domain ND445_18065 PF00465 Iron-containing alcohol dehydrogenase ND445_18070 PF02583 Metal-sensitive transcriptional repressor ND445_18075 PF08240 Alcohol dehydrogenase GroES-like domain ND445_18075 PF00107 Zinc-binding dehydrogenase ND445_18085 PF00756 Putative esterase ND445_18100 PF13610 DDE domain ND445_18105 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ND445_18110 PF02796 Helix-turn-helix domain of resolvase ND445_18110 PF00239 Resolvase, N terminal domain ND445_18115 PF13610 DDE domain