locus-tag class description ND448_00005 PF00308 Bacterial dnaA protein ND448_00005 PF08299 Bacterial dnaA protein helix-turn-helix ND448_00005 PF11638 DnaA N-terminal domain ND448_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ND448_00010 PF02767 DNA polymerase III beta subunit, central domain ND448_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ND448_00015 PF02463 RecF/RecN/SMC N terminal domain ND448_00020 PF01751 Toprim domain ND448_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ND448_00020 PF00204 DNA gyrase B ND448_00020 PF18053 DNA gyrase B subunit insert domain ND448_00030 PF12566 Protein of unknown function (DUF3748) ND448_00030 PF07676 WD40-like Beta Propeller Repeat ND448_00035 PF07119 Protein of unknown function (DUF1375) ND448_00040 PF00011 Hsp20/alpha crystallin family ND448_00045 PF00011 Hsp20/alpha crystallin family ND448_00050 PF02080 TrkA-C domain ND448_00050 PF06826 Predicted Permease Membrane Region ND448_00055 PF00155 Aminotransferase class I and II ND448_00060 PF13488 Glycine zipper ND448_00060 PF00691 OmpA family ND448_00080 PF03352 Methyladenine glycosylase ND448_00090 PF02091 Glycyl-tRNA synthetase alpha subunit ND448_00095 PF05746 DALR anticodon binding domain ND448_00095 PF02092 Glycyl-tRNA synthetase beta subunit ND448_00100 PF11254 Protein of unknown function (DUF3053) ND448_00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND448_00130 PF02378 Phosphotransferase system, EIIC ND448_00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND448_00135 PF01232 Mannitol dehydrogenase Rossmann domain ND448_00135 PF08125 Mannitol dehydrogenase C-terminal domain ND448_00140 PF05068 Mannitol repressor ND448_00145 PF10928 Protein of unknown function (DUF2810) ND448_00150 PF03473 MOSC domain ND448_00150 PF03475 3-alpha domain ND448_00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_00155 PF02203 Tar ligand binding domain homologue ND448_00155 PF00672 HAMP domain ND448_00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND448_00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND448_00165 PF02634 FdhD/NarQ family ND448_00175 PF09163 Formate dehydrogenase N, transmembrane ND448_00175 PF13247 4Fe-4S dicluster domain ND448_00180 PF01292 Prokaryotic cytochrome b561 ND448_00185 PF04216 Protein involved in formate dehydrogenase formation ND448_00190 PF12390 Selenocysteine synthase N terminal ND448_00190 PF03841 L-seryl-tRNA selenium transferase ND448_00195 PF03144 Elongation factor Tu domain 2 ND448_00195 PF09106 Elongation factor SelB, winged helix ND448_00195 PF09107 Elongation factor SelB, winged helix ND448_00195 PF00009 Elongation factor Tu GTP binding domain ND448_00200 PF01427 D-ala-D-ala dipeptidase ND448_00205 PF07690 Major Facilitator Superfamily ND448_00210 PF01757 Acyltransferase family ND448_00220 PF13356 Arm DNA-binding domain ND448_00220 PF14659 Phage integrase, N-terminal SAM-like domain ND448_00220 PF00589 Phage integrase family ND448_00230 PF04606 Ogr/Delta-like zinc finger ND448_00255 PF01175 Urocanase Rossmann-like domain ND448_00255 PF17392 Urocanase C-terminal domain ND448_00255 PF17391 Urocanase N-terminal domain ND448_00260 PF00221 Aromatic amino acid lyase ND448_00265 PF00324 Amino acid permease ND448_00275 PF12146 Serine aminopeptidase, S33 ND448_00280 PF08019 Phosphoethanolamine transferase EptA/EptB ND448_00280 PF00884 Sulfatase ND448_00285 PF00196 Bacterial regulatory proteins, luxR family ND448_00285 PF00072 Response regulator receiver domain ND448_00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_00290 PF07730 Histidine kinase ND448_00290 PF05231 MASE1 ND448_00295 PF07690 Major Facilitator Superfamily ND448_00305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_00310 PF00528 Binding-protein-dependent transport system inner membrane component ND448_00315 PF00528 Binding-protein-dependent transport system inner membrane component ND448_00315 PF12911 N-terminal TM domain of oligopeptide transport permease C ND448_00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_00320 PF00005 ABC transporter ND448_00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_00325 PF00005 ABC transporter ND448_00330 PF11658 Cellulose biosynthesis protein BcsG ND448_00335 PF11120 Cellulose biosynthesis protein BcsF ND448_00340 PF10995 Cellulose biosynthesis GIL ND448_00350 PF06564 Cellulose biosynthesis protein BcsQ ND448_00355 PF03552 Cellulose synthase ND448_00355 PF00535 Glycosyl transferase family 2 ND448_00355 PF07238 PilZ domain ND448_00360 PF03170 Bacterial cellulose synthase subunit ND448_00365 PF01270 Glycosyl hydrolases family 8 ND448_00370 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND448_00375 PF17154 Gammaproteobacterial periplasmic sensor domain ND448_00375 PF00672 HAMP domain ND448_00375 PF00990 Diguanylate cyclase, GGDEF domain ND448_00375 PF00563 EAL domain ND448_00380 PF00375 Sodium:dicarboxylate symporter family ND448_00385 PF00675 Insulinase (Peptidase family M16) ND448_00385 PF05193 Peptidase M16 inactive domain ND448_00390 PF00294 pfkB family carbohydrate kinase ND448_00395 PF01361 Tautomerase enzyme ND448_00400 PF00563 EAL domain ND448_00405 PF02611 CDP-diacylglycerol pyrophosphatase ND448_00410 PF03631 Virulence factor BrkB ND448_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_00415 PF03466 LysR substrate binding domain ND448_00420 PF00375 Sodium:dicarboxylate symporter family ND448_00425 PF01053 Cys/Met metabolism PLP-dependent enzyme ND448_00430 PF02369 Bacterial Ig-like domain (group 1) ND448_00430 PF11924 Inverse autotransporter, beta-domain ND448_00430 PF07979 Intimin C-type lectin domain ND448_00430 PF09134 Invasin, domain 3 ND448_00435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_00435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND448_00440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND448_00445 PF01432 Peptidase family M3 ND448_00450 PF04445 Putative SAM-dependent methyltransferase ND448_00455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND448_00455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND448_00460 PF00582 Universal stress protein family ND448_00465 PF10625 Universal stress protein B (UspB) ND448_00470 PF01384 Phosphate transporter family ND448_00480 PF01810 LysE type translocator ND448_00485 PF00583 Acetyltransferase (GNAT) family ND448_00495 PF02678 Pirin ND448_00495 PF17954 Quercetinase C-terminal cupin domain ND448_00500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND448_00500 PF00356 Bacterial regulatory proteins, lacI family ND448_00505 PF02447 GntP family permease ND448_00510 PF01202 Shikimate kinase ND448_00515 PF01914 MarC family integral membrane protein ND448_00520 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND448_00520 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND448_00525 PF06580 Histidine kinase ND448_00525 PF07694 5TMR of 5TMR-LYT ND448_00530 PF00128 Alpha amylase, catalytic domain ND448_00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND448_00530 PF02806 Alpha amylase, C-terminal all-beta domain ND448_00535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND448_00535 PF18390 Glycogen debranching enzyme C-terminal domain ND448_00535 PF00128 Alpha amylase, catalytic domain ND448_00540 PF00483 Nucleotidyl transferase ND448_00545 PF08323 Starch synthase catalytic domain ND448_00545 PF00534 Glycosyl transferases group 1 ND448_00550 PF00343 Carbohydrate phosphorylase ND448_00555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND448_00555 PF01266 FAD dependent oxidoreductase ND448_00560 PF00455 DeoR C terminal sensor domain ND448_00560 PF08220 DeoR-like helix-turn-helix domain ND448_00565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND448_00565 PF01694 Rhomboid family ND448_00570 PF00581 Rhodanese-like domain ND448_00575 PF17874 MalT-like TPR region ND448_00575 PF00196 Bacterial regulatory proteins, luxR family ND448_00580 PF00343 Carbohydrate phosphorylase ND448_00585 PF02446 4-alpha-glucanotransferase ND448_00590 PF01106 NifU-like domain ND448_00590 PF01521 Iron-sulphur cluster biosynthesis ND448_00595 PF00156 Phosphoribosyl transferase domain ND448_00600 PF00561 alpha/beta hydrolase fold ND448_00610 PF09012 FeoC like transcriptional regulator ND448_00615 PF02421 Ferrous iron transport protein B ND448_00615 PF07664 Ferrous iron transport protein B C terminus ND448_00615 PF07670 Nucleoside recognition ND448_00615 PF17910 FeoB cytosolic helical domain ND448_00620 PF04023 FeoA domain ND448_00625 PF17674 HHH domain ND448_00625 PF00575 S1 RNA binding domain ND448_00625 PF09371 Tex-like protein N-terminal domain ND448_00625 PF16921 Tex protein YqgF-like domain ND448_00650 PF01272 Transcription elongation factor, GreA/GreB, C-term ND448_00650 PF03449 Transcription elongation factor, N-terminal ND448_00655 PF00486 Transcriptional regulatory protein, C terminal ND448_00655 PF00072 Response regulator receiver domain ND448_00660 PF00512 His Kinase A (phospho-acceptor) domain ND448_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_00660 PF00672 HAMP domain ND448_00665 PF01293 Phosphoenolpyruvate carboxykinase ND448_00670 PF01430 Hsp33 protein ND448_00675 PF01479 S4 domain ND448_00680 PF13419 Haloacid dehalogenase-like hydrolase ND448_00685 PF07095 Intracellular growth attenuator protein IgaA ND448_00690 PF00293 NUDIX domain ND448_00695 PF00905 Penicillin binding protein transpeptidase domain ND448_00695 PF00912 Transglycosylase ND448_00695 PF17092 Penicillin-binding protein OB-like domain ND448_00720 PF03958 Bacterial type II/III secretion system short domain ND448_00720 PF00263 Bacterial type II and III secretion system protein ND448_00725 PF01202 Shikimate kinase ND448_00730 PF01761 3-dehydroquinate synthase ND448_00735 PF05036 Sporulation related domain ND448_00740 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND448_00745 PF00834 Ribulose-phosphate 3 epimerase family ND448_00750 PF13419 Haloacid dehalogenase-like hydrolase ND448_00755 PF00579 tRNA synthetases class I (W and Y) ND448_00760 PF10414 Sirohaem synthase dimerisation region ND448_00760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND448_00760 PF14824 Sirohaem biosynthesis protein central ND448_00765 PF01226 Formate/nitrite transporter ND448_00770 PF13806 Rieske-like [2Fe-2S] domain ND448_00775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND448_00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_00775 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND448_00775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND448_00775 PF04324 BFD-like [2Fe-2S] binding domain ND448_00780 PF07969 Amidohydrolase family ND448_00785 PF07690 Major Facilitator Superfamily ND448_00800 PF00356 Bacterial regulatory proteins, lacI family ND448_00805 PF02056 Family 4 glycosyl hydrolase ND448_00805 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND448_00810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND448_00815 PF00117 Glutamine amidotransferase class-I ND448_00820 PF00202 Aminotransferase class-III ND448_00825 PF12805 FUSC-like inner membrane protein yccS ND448_00830 PF00027 Cyclic nucleotide-binding domain ND448_00830 PF13545 Crp-like helix-turn-helix domain ND448_00835 PF02566 OsmC-like protein ND448_00855 PF00156 Phosphoribosyl transferase domain ND448_00860 PF00291 Pyridoxal-phosphate dependent enzyme ND448_00865 PF00485 Phosphoribulokinase / Uridine kinase family ND448_00870 PF06794 Uncharacterised protein family (UPF0270) ND448_00875 PF00561 alpha/beta hydrolase fold ND448_00880 PF01810 LysE type translocator ND448_00885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND448_00890 PF00535 Glycosyl transferase family 2 ND448_00895 PF00005 ABC transporter ND448_00895 PF12848 ABC transporter ND448_00900 PF02525 Flavodoxin-like fold ND448_00905 PF00999 Sodium/hydrogen exchanger family ND448_00905 PF02254 TrkA-N domain ND448_00910 PF09526 Probable metal-binding protein (DUF2387) ND448_00915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND448_00920 PF04102 SlyX ND448_00925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND448_00925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND448_00930 PF13309 HTH domain ND448_00930 PF08348 YheO-like PAS domain ND448_00935 PF02635 DsrE/DsrF-like family ND448_00940 PF02635 DsrE/DsrF-like family ND448_00945 PF04077 DsrH like protein ND448_00950 PF00164 Ribosomal protein S12/S23 ND448_00955 PF00177 Ribosomal protein S7p/S5e ND448_00960 PF00679 Elongation factor G C-terminus ND448_00960 PF14492 Elongation Factor G, domain II ND448_00960 PF03764 Elongation factor G, domain IV ND448_00960 PF00009 Elongation factor Tu GTP binding domain ND448_00960 PF03144 Elongation factor Tu domain 2 ND448_00965 PF00009 Elongation factor Tu GTP binding domain ND448_00965 PF03144 Elongation factor Tu domain 2 ND448_00965 PF03143 Elongation factor Tu C-terminal domain ND448_00970 PF04324 BFD-like [2Fe-2S] binding domain ND448_00975 PF00210 Ferritin-like domain ND448_00980 PF00338 Ribosomal protein S10p/S20e ND448_00985 PF00297 Ribosomal protein L3 ND448_00990 PF00573 Ribosomal protein L4/L1 family ND448_00995 PF00276 Ribosomal protein L23 ND448_01000 PF00181 Ribosomal Proteins L2, RNA binding domain ND448_01000 PF03947 Ribosomal Proteins L2, C-terminal domain ND448_01005 PF00203 Ribosomal protein S19 ND448_01010 PF00237 Ribosomal protein L22p/L17e ND448_01015 PF07650 KH domain ND448_01015 PF00189 Ribosomal protein S3, C-terminal domain ND448_01020 PF00252 Ribosomal protein L16p/L10e ND448_01025 PF00831 Ribosomal L29 protein ND448_01030 PF00366 Ribosomal protein S17 ND448_01035 PF00238 Ribosomal protein L14p/L23e ND448_01040 PF00467 KOW motif ND448_01040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND448_01045 PF00281 Ribosomal protein L5 ND448_01045 PF00673 ribosomal L5P family C-terminus ND448_01050 PF00253 Ribosomal protein S14p/S29e ND448_01055 PF00410 Ribosomal protein S8 ND448_01060 PF00347 Ribosomal protein L6 ND448_01065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND448_01070 PF00333 Ribosomal protein S5, N-terminal domain ND448_01070 PF03719 Ribosomal protein S5, C-terminal domain ND448_01075 PF00327 Ribosomal protein L30p/L7e ND448_01080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND448_01085 PF00344 SecY translocase ND448_01090 PF00444 Ribosomal protein L36 ND448_01095 PF00416 Ribosomal protein S13/S18 ND448_01100 PF00411 Ribosomal protein S11 ND448_01105 PF01479 S4 domain ND448_01105 PF00163 Ribosomal protein S4/S9 N-terminal domain ND448_01110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND448_01110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND448_01110 PF01000 RNA polymerase Rpb3/RpoA insert domain ND448_01115 PF01196 Ribosomal protein L17 ND448_01120 PF13411 MerR HTH family regulatory protein ND448_01125 PF03889 Alternative ribosome-rescue factor A ND448_01130 PF01741 Large-conductance mechanosensitive channel, MscL ND448_01135 PF02080 TrkA-C domain ND448_01135 PF02254 TrkA-N domain ND448_01140 PF01189 16S rRNA methyltransferase RsmB/F ND448_01140 PF01029 NusB family ND448_01145 PF02911 Formyl transferase, C-terminal domain ND448_01145 PF00551 Formyl transferase ND448_01150 PF01327 Polypeptide deformylase ND448_01155 PF02481 DNA recombination-mediator protein A ND448_01155 PF17782 DprA winged helix domain ND448_01160 PF04361 Protein of unknown function (DUF494) ND448_01165 PF01396 Topoisomerase DNA binding C4 zinc finger ND448_01170 PF01300 Telomere recombination ND448_01175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND448_01175 PF01488 Shikimate / quinate 5-dehydrogenase ND448_01175 PF08501 Shikimate dehydrogenase substrate binding domain ND448_01180 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_01210 PF00474 Sodium:solute symporter family ND448_01215 PF04341 Protein of unknown function, DUF485 ND448_01220 PF16177 Acetyl-coenzyme A synthetase N-terminus ND448_01220 PF00501 AMP-binding enzyme ND448_01220 PF13193 AMP-binding enzyme C-terminal domain ND448_01225 PF00375 Sodium:dicarboxylate symporter family ND448_01235 PF04143 Sulphur transport ND448_01240 PF01206 Sulfurtransferase TusA ND448_01245 PF02719 Polysaccharide biosynthesis protein ND448_01250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND448_01255 PF02350 UDP-N-acetylglucosamine 2-epimerase ND448_01260 PF08666 SAF domain ND448_01260 PF03102 NeuB family ND448_01270 PF00483 Nucleotidyl transferase ND448_01280 PF02348 Cytidylyltransferase ND448_01280 PF13472 GDSL-like Lipase/Acylhydrolase family ND448_01305 PF00795 Carbon-nitrogen hydrolase ND448_01305 PF02540 NAD synthase ND448_01310 PF00117 Glutamine amidotransferase class-I ND448_01315 PF00977 Histidine biosynthesis protein ND448_01320 PF08485 Polysaccharide biosynthesis protein C-terminal ND448_01320 PF02719 Polysaccharide biosynthesis protein ND448_01325 PF01370 NAD dependent epimerase/dehydratase family ND448_01330 PF02350 UDP-N-acetylglucosamine 2-epimerase ND448_01355 PF11412 Disulphide bond corrector protein DsbC ND448_01355 PF02683 Cytochrome C biogenesis protein transmembrane region ND448_01360 PF03091 CutA1 divalent ion tolerance protein ND448_01365 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND448_01370 PF10415 Fumarase C C-terminus ND448_01370 PF00206 Lyase ND448_01375 PF04186 FxsA cytoplasmic membrane protein ND448_01380 PF00166 Chaperonin 10 Kd subunit ND448_01385 PF00118 TCP-1/cpn60 chaperonin family ND448_01390 PF13698 Domain of unknown function (DUF4156) ND448_01395 PF04055 Radical SAM superfamily ND448_01400 PF08207 Elongation factor P (EF-P) KOW-like domain ND448_01400 PF01132 Elongation factor P (EF-P) OB domain ND448_01400 PF09285 Elongation factor P, C-terminal ND448_01405 PF18416 N-acetylglucosamine binding protein domain 2 ND448_01405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND448_01410 PF00196 Bacterial regulatory proteins, luxR family ND448_01420 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_01420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_01425 PF13953 PapC C-terminal domain ND448_01425 PF13954 PapC N-terminal domain ND448_01425 PF00577 Outer membrane usher protein ND448_01430 PF00419 Fimbrial protein ND448_01435 PF00893 Small Multidrug Resistance protein ND448_01440 PF08212 Lipocalin-like domain ND448_01445 PF02313 Fumarate reductase subunit D ND448_01450 PF02300 Fumarate reductase subunit C ND448_01455 PF13085 2Fe-2S iron-sulfur cluster binding domain ND448_01455 PF13183 4Fe-4S dicluster domain ND448_01460 PF00890 FAD binding domain ND448_01460 PF02910 Fumarate reductase flavoprotein C-term ND448_01465 PF00152 tRNA synthetases class II (D, K and N) ND448_01470 PF00924 Mechanosensitive ion channel ND448_01470 PF12795 Mechanosensitive ion channel porin domain ND448_01470 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND448_01475 PF02666 Phosphatidylserine decarboxylase ND448_01480 PF03193 RsgA GTPase ND448_01485 PF00929 Exonuclease ND448_01505 PF08331 Domain of unknown function (DUF1730) ND448_01510 PF03853 YjeF-related protein N-terminus ND448_01510 PF01256 Carbohydrate kinase ND448_01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND448_01520 PF01520 N-acetylmuramoyl-L-alanine amidase ND448_01525 PF08676 MutL C terminal dimerisation domain ND448_01525 PF01119 DNA mismatch repair protein, C-terminal domain ND448_01535 PF17209 Hfq protein ND448_01540 PF16360 GTP-binding GTPase Middle Region ND448_01540 PF13167 GTP-binding GTPase N-terminal ND448_01540 PF01926 50S ribosome-binding GTPase ND448_01545 PF01145 SPFH domain / Band 7 family ND448_01545 PF12221 Bacterial membrane protein N terminal ND448_01550 PF01145 SPFH domain / Band 7 family ND448_01555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND448_01560 PF00709 Adenylosuccinate synthetase ND448_01565 PF02082 Transcriptional regulator ND448_01570 PF08461 Ribonuclease R winged-helix domain ND448_01570 PF08206 Ribonuclease B OB domain ND448_01570 PF00773 RNB domain ND448_01570 PF00575 S1 RNA binding domain ND448_01570 PF17876 Cold shock domain ND448_01575 PF00588 SpoU rRNA Methylase family ND448_01575 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND448_01595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_01600 PF13953 PapC C-terminal domain ND448_01600 PF13954 PapC N-terminal domain ND448_01600 PF00577 Outer membrane usher protein ND448_01620 PF00326 Prolyl oligopeptidase family ND448_01630 PF01250 Ribosomal protein S6 ND448_01635 PF00436 Single-strand binding protein family ND448_01640 PF01084 Ribosomal protein S18 ND448_01645 PF01281 Ribosomal protein L9, N-terminal domain ND448_01645 PF03948 Ribosomal protein L9, C-terminal domain ND448_01650 PF08525 Opacity-associated protein A N-terminal motif ND448_01650 PF04225 Opacity-associated protein A LysM-like domain ND448_01655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND448_01655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND448_01660 PF01814 Hemerythrin HHE cation binding domain ND448_01660 PF04405 Domain of Unknown function (DUF542) ND448_01665 PF02872 5'-nucleotidase, C-terminal domain ND448_01665 PF00149 Calcineurin-like phosphoesterase ND448_01670 PF00459 Inositol monophosphatase family ND448_01675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND448_01680 PF06526 Protein of unknown function (DUF1107) ND448_01685 PF03471 Transporter associated domain ND448_01685 PF01595 Cyclin M transmembrane N-terminal domain ND448_01685 PF00571 CBS domain ND448_01690 PF01625 Peptide methionine sulfoxide reductase ND448_01695 PF01103 Surface antigen ND448_01695 PF07244 Surface antigen variable number repeat ND448_01695 PF17243 POTRA domain TamA domain 1 ND448_01700 PF04357 TamB, inner membrane protein subunit of TAM complex ND448_01705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND448_01710 PF00719 Inorganic pyrophosphatase ND448_01715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND448_01720 PF01225 Mur ligase family, catalytic domain ND448_01720 PF02875 Mur ligase family, glutamate ligase domain ND448_01720 PF08245 Mur ligase middle domain ND448_01725 PF02863 Arginine repressor, C-terminal domain ND448_01725 PF01316 Arginine repressor, DNA binding domain ND448_01730 PF00056 lactate/malate dehydrogenase, NAD binding domain ND448_01730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND448_01735 PF13693 Winged helix-turn-helix DNA-binding ND448_01750 PF00348 Polyprenyl synthetase ND448_01755 PF00829 Ribosomal prokaryotic L21 protein ND448_01760 PF01016 Ribosomal L27 protein ND448_01765 PF00892 EamA-like transporter family ND448_01770 PF01926 50S ribosome-binding GTPase ND448_01770 PF01018 GTP1/OBG ND448_01775 PF00512 His Kinase A (phospho-acceptor) domain ND448_01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_01775 PF00672 HAMP domain ND448_01780 PF00072 Response regulator receiver domain ND448_01780 PF00486 Transcriptional regulatory protein, C terminal ND448_01785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND448_01790 PF01272 Transcription elongation factor, GreA/GreB, C-term ND448_01790 PF03449 Transcription elongation factor, N-terminal ND448_01795 PF01985 CRS1 / YhbY (CRM) domain ND448_01800 PF01728 FtsJ-like methyltransferase ND448_01805 PF01434 Peptidase family M41 ND448_01805 PF06480 FtsH Extracellular ND448_01805 PF17862 AAA+ lid domain ND448_01805 PF00004 ATPase family associated with various cellular activities (AAA) ND448_01810 PF00809 Pterin binding enzyme ND448_01815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND448_01815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND448_01815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND448_01815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND448_01820 PF03840 Preprotein translocase SecG subunit ND448_01835 PF02576 RimP N-terminal domain ND448_01835 PF17384 RimP C-terminal SH3 domain ND448_01840 PF08529 NusA N-terminal domain ND448_01840 PF13184 NusA-like KH domain ND448_01840 PF00575 S1 RNA binding domain ND448_01845 PF00009 Elongation factor Tu GTP binding domain ND448_01845 PF03144 Elongation factor Tu domain 2 ND448_01845 PF11987 Translation-initiation factor 2 ND448_01845 PF08364 Bacterial translation initiation factor IF-2 associated region ND448_01845 PF04760 Translation initiation factor IF-2, N-terminal region ND448_01850 PF02033 Ribosome-binding factor A ND448_01855 PF09157 Pseudouridine synthase II TruB, C-terminal ND448_01855 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND448_01855 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND448_01860 PF00312 Ribosomal protein S15 ND448_01865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND448_01865 PF01138 3' exoribonuclease family, domain 1 ND448_01865 PF03725 3' exoribonuclease family, domain 2 ND448_01865 PF00575 S1 RNA binding domain ND448_01865 PF00013 KH domain ND448_01870 PF07719 Tetratricopeptide repeat ND448_01870 PF13181 Tetratricopeptide repeat ND448_01875 PF03880 DbpA RNA binding domain ND448_01875 PF00270 DEAD/DEAH box helicase ND448_01875 PF12343 Cold shock protein DEAD box A ND448_01875 PF00271 Helicase conserved C-terminal domain ND448_01880 PF00296 Luciferase-like monooxygenase ND448_01890 PF03313 Serine dehydratase alpha chain ND448_01895 PF01136 Peptidase family U32 ND448_01900 PF01136 Peptidase family U32 ND448_01905 PF02036 SCP-2 sterol transfer family ND448_01910 PF13508 Acetyltransferase (GNAT) domain ND448_01915 PF01541 GIY-YIG catalytic domain ND448_01920 PF13520 Amino acid permease ND448_01925 PF01276 Orn/Lys/Arg decarboxylase, major domain ND448_01925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND448_01925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND448_01930 PF10940 Protein of unknown function (DUF2618) ND448_01940 PF13460 NAD(P)H-binding ND448_01945 PF12706 Beta-lactamase superfamily domain ND448_01955 PF07969 Amidohydrolase family ND448_01960 PF00005 ABC transporter ND448_01965 PF00005 ABC transporter ND448_01970 PF06007 Phosphonate metabolism protein PhnJ ND448_01975 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND448_01980 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND448_01985 PF06754 Phosphonate metabolism protein PhnG ND448_01995 PF03477 ATP cone domain ND448_01995 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND448_02000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND448_02000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND448_02005 PF06877 Regulator of ribonuclease activity B ND448_02010 PF00583 Acetyltransferase (GNAT) family ND448_02015 PF10458 Valyl tRNA synthetase tRNA binding arm ND448_02015 PF00133 tRNA synthetases class I (I, L, M and V) ND448_02015 PF08264 Anticodon-binding domain of tRNA ND448_02020 PF04364 DNA polymerase III chi subunit, HolC ND448_02025 PF00883 Cytosol aminopeptidase family, catalytic domain ND448_02025 PF02789 Cytosol aminopeptidase family, N-terminal domain ND448_02030 PF03739 Lipopolysaccharide export system permease LptF/LptG ND448_02035 PF03739 Lipopolysaccharide export system permease LptF/LptG ND448_02075 PF04221 RelB antitoxin ND448_02080 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ND448_02125 PF00892 EamA-like transporter family ND448_02170 PF01344 Kelch motif ND448_02175 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND448_02180 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND448_02180 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ND448_02180 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND448_02195 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND448_02195 PF09093 Lyase, catalytic ND448_02195 PF09092 Lyase, N terminal ND448_02195 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND448_02200 PF00884 Sulfatase ND448_02205 PF00455 DeoR C terminal sensor domain ND448_02205 PF08220 DeoR-like helix-turn-helix domain ND448_02210 PF08013 Tagatose 6 phosphate kinase ND448_02215 PF01380 SIS domain ND448_02220 PF03830 PTS system sorbose subfamily IIB component ND448_02225 PF03609 PTS system sorbose-specific iic component ND448_02230 PF03613 PTS system mannose/fructose/sorbose family IID component ND448_02240 PF01979 Amidohydrolase family ND448_02245 PF04962 KduI/IolB family ND448_02255 PF07470 Glycosyl Hydrolase Family 88 ND448_02260 PF04055 Radical SAM superfamily ND448_02260 PF13186 Iron-sulfur cluster-binding domain ND448_02265 PF00884 Sulfatase ND448_02275 PF01116 Fructose-bisphosphate aldolase class-II ND448_02285 PF10696 Protein of unknown function (DUF2501) ND448_02290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND448_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND448_02310 PF00873 AcrB/AcrD/AcrF family ND448_02315 PF00465 Iron-containing alcohol dehydrogenase ND448_02320 PF02733 Dak1 domain ND448_02325 PF02734 DAK2 domain ND448_02330 PF03610 PTS system fructose IIA component ND448_02330 PF05524 PEP-utilising enzyme, N-terminal ND448_02330 PF00391 PEP-utilising enzyme, mobile domain ND448_02330 PF00381 PTS HPr component phosphorylation site ND448_02335 PF02954 Bacterial regulatory protein, Fis family ND448_02335 PF00158 Sigma-54 interaction domain ND448_02335 PF00989 PAS fold ND448_02340 PF00990 Diguanylate cyclase, GGDEF domain ND448_02345 PF07256 Protein of unknown function (DUF1435) ND448_02365 PF08468 Methyltransferase small domain N-terminal ND448_02365 PF05175 Methyltransferase small domain ND448_02370 PF03603 DNA polymerase III psi subunit ND448_02375 PF00583 Acetyltransferase (GNAT) family ND448_02380 PF03144 Elongation factor Tu domain 2 ND448_02380 PF00009 Elongation factor Tu GTP binding domain ND448_02380 PF16658 Class II release factor RF3, C-terminal domain ND448_02385 PF04972 BON domain ND448_02390 PF07043 Protein of unknown function (DUF1328) ND448_02395 PF01734 Patatin-like phospholipase ND448_02400 PF01026 TatD related DNase ND448_02405 PF07662 Na+ dependent nucleoside transporter C-terminus ND448_02405 PF07670 Nucleoside recognition ND448_02405 PF01773 Na+ dependent nucleoside transporter N-terminus ND448_02410 PF01791 DeoC/LacD family aldolase ND448_02415 PF02885 Glycosyl transferase family, helical bundle domain ND448_02415 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND448_02415 PF00591 Glycosyl transferase family, a/b domain ND448_02420 PF01676 Metalloenzyme superfamily ND448_02425 PF01048 Phosphorylase superfamily ND448_02430 PF10144 Bacterial virulence factor haemolysin ND448_02435 PF18429 Domain of unknown function (DUF5609) ND448_02440 PF18073 Rubredoxin metal binding domain ND448_02445 PF01381 Helix-turn-helix ND448_02445 PF13521 AAA domain ND448_02450 PF12848 ABC transporter ND448_02450 PF00005 ABC transporter ND448_02465 PF00690 Cation transporter/ATPase, N-terminus ND448_02465 PF00689 Cation transporting ATPase, C-terminus ND448_02475 PF14718 Soluble lytic murein transglycosylase L domain ND448_02475 PF01464 Transglycosylase SLT domain ND448_02480 PF01371 Trp repressor protein ND448_02485 PF01931 Protein of unknown function DUF84 ND448_02490 PF00300 Histidine phosphatase superfamily (branch 1) ND448_02495 PF06445 GyrI-like small molecule binding domain ND448_02495 PF12833 Helix-turn-helix domain ND448_02500 PF05981 CreA protein ND448_02505 PF00072 Response regulator receiver domain ND448_02505 PF00486 Transcriptional regulatory protein, C terminal ND448_02515 PF08254 Threonine leader peptide ND448_02520 PF03447 Homoserine dehydrogenase, NAD binding domain ND448_02520 PF01842 ACT domain ND448_02520 PF00696 Amino acid kinase family ND448_02520 PF00742 Homoserine dehydrogenase ND448_02520 PF13840 ACT domain ND448_02525 PF08544 GHMP kinases C terminal ND448_02525 PF00288 GHMP kinases N terminal domain ND448_02530 PF00291 Pyridoxal-phosphate dependent enzyme ND448_02530 PF14821 Threonine synthase N terminus ND448_02535 PF03883 Peroxide stress protein YaaA ND448_02540 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND448_02545 PF00994 Probable molybdopterin binding domain ND448_02550 PF07690 Major Facilitator Superfamily ND448_02560 PF01184 GPR1/FUN34/yaaH family ND448_02565 PF00012 Hsp70 protein ND448_02570 PF01556 DnaJ C terminal domain ND448_02570 PF00226 DnaJ domain ND448_02570 PF00684 DnaJ central domain ND448_02575 PF06965 Na+/H+ antiporter 1 ND448_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_02580 PF03466 LysR substrate binding domain ND448_02585 PF01649 Ribosomal protein S20 ND448_02590 PF06574 FAD synthetase ND448_02590 PF01687 Riboflavin kinase ND448_02595 PF06827 Zinc finger found in FPG and IleRS ND448_02595 PF08264 Anticodon-binding domain of tRNA ND448_02595 PF00133 tRNA synthetases class I (I, L, M and V) ND448_02600 PF01252 Signal peptidase (SPase) II ND448_02605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND448_02610 PF02401 LytB protein ND448_02615 PF05173 Dihydrodipicolinate reductase, C-terminus ND448_02615 PF01113 Dihydrodipicolinate reductase, N-terminus ND448_02620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND448_02620 PF00117 Glutamine amidotransferase class-I ND448_02625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND448_02625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND448_02625 PF02142 MGS-like domain ND448_02630 PF01810 LysE type translocator ND448_02635 PF06738 Putative threonine/serine exporter ND448_02640 PF12821 Threonine/Serine exporter, ThrE ND448_02645 PF00186 Dihydrofolate reductase ND448_02655 PF00149 Calcineurin-like phosphoesterase ND448_02660 PF04379 ApaG domain ND448_02665 PF00398 Ribosomal RNA adenine dimethylase ND448_02670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND448_02675 PF09312 SurA N-terminal domain ND448_02675 PF00639 PPIC-type PPIASE domain ND448_02680 PF04453 LPS transport system D ND448_02680 PF03968 OstA-like protein ND448_02685 PF05099 Tellurite resistance protein TerB ND448_02685 PF00226 DnaJ domain ND448_02690 PF00849 RNA pseudouridylate synthase ND448_02695 PF00271 Helicase conserved C-terminal domain ND448_02695 PF12137 RNA polymerase recycling family C-terminal ND448_02695 PF00176 SNF2 family N-terminal domain ND448_02695 PF18339 RapA N-terminal Tudor like domain 1 ND448_02695 PF18337 RapA N-terminal Tudor like domain ND448_02700 PF00136 DNA polymerase family B ND448_02700 PF03104 DNA polymerase family B, exonuclease domain ND448_02705 PF09335 SNARE associated Golgi protein ND448_02710 PF00005 ABC transporter ND448_02715 PF00528 Binding-protein-dependent transport system inner membrane component ND448_02725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_02725 PF12793 Sugar transport-related sRNA regulator N-term ND448_02735 PF07690 Major Facilitator Superfamily ND448_02740 PF00694 Aconitase C-terminal domain ND448_02745 PF00330 Aconitase family (aconitate hydratase) ND448_02750 PF00180 Isocitrate/isopropylmalate dehydrogenase ND448_02755 PF08502 LeuA allosteric (dimerisation) domain ND448_02755 PF00682 HMGL-like ND448_02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_02760 PF03466 LysR substrate binding domain ND448_02765 PF00501 AMP-binding enzyme ND448_02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND448_02770 PF00205 Thiamine pyrophosphate enzyme, central domain ND448_02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND448_02775 PF10369 Small subunit of acetolactate synthase ND448_02780 PF00356 Bacterial regulatory proteins, lacI family ND448_02780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND448_02785 PF06610 L-alanine exporter ND448_02790 PF02381 MraZ protein, putative antitoxin-like ND448_02795 PF01795 MraW methylase family ND448_02800 PF04999 Cell division protein FtsL ND448_02805 PF00905 Penicillin binding protein transpeptidase domain ND448_02805 PF03717 Penicillin-binding Protein dimerisation domain ND448_02810 PF01225 Mur ligase family, catalytic domain ND448_02810 PF02875 Mur ligase family, glutamate ligase domain ND448_02810 PF08245 Mur ligase middle domain ND448_02815 PF01225 Mur ligase family, catalytic domain ND448_02815 PF02875 Mur ligase family, glutamate ligase domain ND448_02815 PF08245 Mur ligase middle domain ND448_02820 PF00953 Glycosyl transferase family 4 ND448_02820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND448_02825 PF08245 Mur ligase middle domain ND448_02825 PF02875 Mur ligase family, glutamate ligase domain ND448_02830 PF01098 Cell cycle protein ND448_02835 PF04101 Glycosyltransferase family 28 C-terminal domain ND448_02835 PF03033 Glycosyltransferase family 28 N-terminal domain ND448_02840 PF01225 Mur ligase family, catalytic domain ND448_02840 PF02875 Mur ligase family, glutamate ligase domain ND448_02840 PF08245 Mur ligase middle domain ND448_02845 PF07478 D-ala D-ala ligase C-terminus ND448_02845 PF01820 D-ala D-ala ligase N-terminus ND448_02850 PF08478 POTRA domain, FtsQ-type ND448_02850 PF03799 Cell division protein FtsQ ND448_02855 PF02491 SHS2 domain inserted in FTSA ND448_02860 PF00091 Tubulin/FtsZ family, GTPase domain ND448_02860 PF12327 FtsZ family, C-terminal domain ND448_02865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND448_02875 PF06558 Secretion monitor precursor protein (SecM) ND448_02880 PF02810 SEC-C motif ND448_02880 PF07517 SecA DEAD-like domain ND448_02880 PF01043 SecA preprotein cross-linking domain ND448_02880 PF07516 SecA Wing and Scaffold domain ND448_02885 PF00293 NUDIX domain ND448_02890 PF03884 DNA gyrase inhibitor YacG ND448_02895 PF07072 Cell division protein ND448_02900 PF01121 Dephospho-CoA kinase ND448_02905 PF00478 IMP dehydrogenase / GMP reductase domain ND448_02910 PF00482 Type II secretion system (T2SS), protein F ND448_02915 PF00437 Type II/IV secretion system protein ND448_02915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND448_02920 PF07963 Prokaryotic N-terminal methylation motif ND448_02925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND448_02925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND448_02930 PF01510 N-acetylmuramoyl-L-alanine amidase ND448_02935 PF17113 Regulatory signalling modulator protein AmpE ND448_02940 PF00324 Amino acid permease ND448_02945 PF07729 FCD domain ND448_02945 PF00392 Bacterial regulatory proteins, gntR family ND448_02950 PF17831 Pyruvate dehydrogenase E1 component middle domain ND448_02950 PF00456 Transketolase, thiamine diphosphate binding domain ND448_02955 PF02817 e3 binding domain ND448_02955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND448_02955 PF00364 Biotin-requiring enzyme ND448_02960 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_02960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND448_02970 PF00330 Aconitase family (aconitate hydratase) ND448_02970 PF06434 Aconitate hydratase 2 N-terminus ND448_02970 PF11791 Aconitate B N-terminal domain ND448_02975 PF06062 Uncharacterised protein family (UPF0231) ND448_02980 PF00892 EamA-like transporter family ND448_02985 PF02675 S-adenosylmethionine decarboxylase ND448_02990 PF17284 Spermidine synthase tetramerisation domain ND448_02995 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND448_03000 PF00394 Multicopper oxidase ND448_03000 PF07731 Multicopper oxidase ND448_03000 PF07732 Multicopper oxidase ND448_03000 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND448_03005 PF00156 Phosphoribosyl transferase domain ND448_03010 PF00484 Carbonic anhydrase ND448_03015 PF00005 ABC transporter ND448_03020 PF01061 ABC-2 type transporter ND448_03025 PF01522 Polysaccharide deacetylase ND448_03030 PF02261 Aspartate decarboxylase ND448_03035 PF02569 Pantoate-beta-alanine ligase ND448_03040 PF02548 Ketopantoate hydroxymethyltransferase ND448_03045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND448_03050 PF01743 Poly A polymerase head domain ND448_03050 PF12626 Polymerase A arginine-rich C-terminus ND448_03050 PF12627 Probable RNA and SrmB- binding site of polymerase A ND448_03055 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND448_03060 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND448_03065 PF03749 Sugar fermentation stimulation protein RE domain ND448_03065 PF17746 SfsA N-terminal OB domain ND448_03070 PF02834 LigT like Phosphoesterase ND448_03075 PF00270 DEAD/DEAH box helicase ND448_03075 PF04408 Helicase associated domain (HA2) ND448_03075 PF00271 Helicase conserved C-terminal domain ND448_03075 PF08482 ATP-dependent helicase C-terminal ND448_03080 PF14814 Bifunctional transglycosylase second domain ND448_03080 PF00905 Penicillin binding protein transpeptidase domain ND448_03080 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND448_03080 PF00912 Transglycosylase ND448_03085 PF00202 Aminotransferase class-III ND448_03090 PF00654 Voltage gated chloride channel ND448_03095 PF01521 Iron-sulphur cluster biosynthesis ND448_03100 PF03458 UPF0126 domain ND448_03105 PF01497 Periplasmic binding protein ND448_03110 PF01048 Phosphorylase superfamily ND448_03115 PF01966 HD domain ND448_03115 PF13286 Phosphohydrolase-associated domain ND448_03120 PF00595 PDZ domain ND448_03125 PF00672 HAMP domain ND448_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_03125 PF00512 His Kinase A (phospho-acceptor) domain ND448_03125 PF00072 Response regulator receiver domain ND448_03125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND448_03125 PF01627 Hpt domain ND448_03130 PF05958 tRNA (Uracil-5-)-methyltransferase ND448_03130 PF01938 TRAM domain ND448_03135 PF02824 TGS domain ND448_03135 PF13291 ACT domain ND448_03135 PF04607 Region found in RelA / SpoT proteins ND448_03140 PF03819 MazG nucleotide pyrophosphohydrolase domain ND448_03145 PF06418 CTP synthase N-terminus ND448_03145 PF00117 Glutamine amidotransferase class-I ND448_03150 PF00113 Enolase, C-terminal TIM barrel domain ND448_03150 PF03952 Enolase, N-terminal domain ND448_03155 PF04055 Radical SAM superfamily ND448_03160 PF01242 6-pyruvoyl tetrahydropterin synthase ND448_03165 PF00258 Flavodoxin ND448_03165 PF00667 FAD binding domain ND448_03165 PF00175 Oxidoreductase NAD-binding domain ND448_03170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND448_03170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND448_03175 PF01507 Phosphoadenosine phosphosulfate reductase family ND448_03190 PF04389 Peptidase family M28 ND448_03195 PF10414 Sirohaem synthase dimerisation region ND448_03195 PF14824 Sirohaem biosynthesis protein central ND448_03195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND448_03200 PF01507 Phosphoadenosine phosphosulfate reductase family ND448_03205 PF00009 Elongation factor Tu GTP binding domain ND448_03215 PF12084 Protein of unknown function (DUF3561) ND448_03220 PF04977 Septum formation initiator ND448_03225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND448_03230 PF02542 YgbB family ND448_03235 PF01142 tRNA pseudouridine synthase D (TruD) ND448_03240 PF01975 Survival protein SurE ND448_03250 PF01476 LysM domain ND448_03250 PF01551 Peptidase family M23 ND448_03255 PF00140 Sigma-70 factor, region 1.2 ND448_03255 PF04542 Sigma-70 region 2 ND448_03255 PF04545 Sigma-70, region 4 ND448_03255 PF04539 Sigma-70 region 3 ND448_03260 PF00488 MutS domain V ND448_03260 PF05190 MutS family domain IV ND448_03260 PF05192 MutS domain III ND448_03260 PF05188 MutS domain II ND448_03260 PF01624 MutS domain I ND448_03295 PF00501 AMP-binding enzyme ND448_03295 PF13193 AMP-binding enzyme C-terminal domain ND448_03295 PF00668 Condensation domain ND448_03295 PF00550 Phosphopantetheine attachment site ND448_03330 PF00072 Response regulator receiver domain ND448_03330 PF00512 His Kinase A (phospho-acceptor) domain ND448_03330 PF09308 LuxQ, periplasmic ND448_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_03335 PF00196 Bacterial regulatory proteins, luxR family ND448_03335 PF00072 Response regulator receiver domain ND448_03350 PF01464 Transglycosylase SLT domain ND448_03370 PF01514 Secretory protein of YscJ/FliF family ND448_03390 PF12833 Helix-turn-helix domain ND448_03395 PF00263 Bacterial type II and III secretion system protein ND448_03395 PF03958 Bacterial type II/III secretion system short domain ND448_03400 PF07201 HrpJ-like domain ND448_03405 PF00771 FHIPEP family ND448_03415 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND448_03415 PF18269 T3SS EscN ATPase C-terminal domain ND448_03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND448_03430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND448_03435 PF00813 FliP family ND448_03440 PF01313 Bacterial export proteins, family 3 ND448_03445 PF01311 Bacterial export proteins, family 1 ND448_03450 PF01312 FlhB HrpN YscU SpaS Family ND448_03455 PF07720 Tetratricopeptide repeat ND448_03480 PF00550 Phosphopantetheine attachment site ND448_03500 PF18416 N-acetylglucosamine binding protein domain 2 ND448_03500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND448_03505 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND448_03510 PF01478 Type IV leader peptidase family ND448_03510 PF06750 Bacterial Peptidase A24 N-terminal domain ND448_03520 PF05134 Type II secretion system (T2SS), protein L ND448_03520 PF12693 GspL periplasmic domain ND448_03525 PF03934 Type II secretion system (T2SS), protein K ND448_03530 PF11612 Type II secretion system (T2SS), protein J ND448_03530 PF07963 Prokaryotic N-terminal methylation motif ND448_03535 PF07963 Prokaryotic N-terminal methylation motif ND448_03535 PF02501 Type II secretion system (T2SS), protein I ND448_03545 PF08334 Type II secretion system (T2SS), protein G ND448_03545 PF07963 Prokaryotic N-terminal methylation motif ND448_03550 PF00482 Type II secretion system (T2SS), protein F ND448_03555 PF00437 Type II/IV secretion system protein ND448_03560 PF00263 Bacterial type II and III secretion system protein ND448_03560 PF03958 Bacterial type II/III secretion system short domain ND448_03565 PF11356 Type II secretion system protein C ND448_03590 PF05681 Fumarate hydratase (Fumerase) ND448_03590 PF05683 Fumarase C-terminus ND448_03595 PF07690 Major Facilitator Superfamily ND448_03600 PF02464 Competence-damaged protein ND448_03605 PF00154 recA bacterial DNA recombination protein ND448_03610 PF02631 RecX family ND448_03615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND448_03615 PF01411 tRNA synthetases class II (A) ND448_03615 PF02272 DHHA1 domain ND448_03620 PF02599 Global regulator protein family ND448_03645 PF01411 tRNA synthetases class II (A) ND448_03645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND448_03650 PF13419 Haloacid dehalogenase-like hydrolase ND448_03655 PF09335 SNARE associated Golgi protein ND448_03660 PF04262 Glutamate-cysteine ligase ND448_03665 PF02664 S-Ribosylhomocysteinase (LuxS) ND448_03670 PF00571 CBS domain ND448_03670 PF03471 Transporter associated domain ND448_03670 PF01595 Cyclin M transmembrane N-terminal domain ND448_03675 PF01578 Cytochrome C assembly protein ND448_03680 PF02881 SRP54-type protein, helical bundle domain ND448_03680 PF00448 SRP54-type protein, GTPase domain ND448_03680 PF02978 Signal peptide binding domain ND448_03685 PF00886 Ribosomal protein S16 ND448_03690 PF05239 PRC-barrel domain ND448_03690 PF01782 RimM N-terminal domain ND448_03695 PF01746 tRNA (Guanine-1)-methyltransferase ND448_03700 PF01245 Ribosomal protein L19 ND448_03705 PF04338 Protein of unknown function, DUF481 ND448_03710 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND448_03715 PF00072 Response regulator receiver domain ND448_03715 PF04397 LytTr DNA-binding domain ND448_03720 PF00793 DAHP synthetase I family ND448_03725 PF01817 Chorismate mutase type II ND448_03725 PF02153 Prephenate dehydrogenase ND448_03730 PF01817 Chorismate mutase type II ND448_03730 PF00800 Prephenate dehydratase ND448_03740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND448_03745 PF13525 Outer membrane lipoprotein ND448_03750 PF00849 RNA pseudouridylate synthase ND448_03750 PF01479 S4 domain ND448_03755 PF02578 Multi-copper polyphenol oxidoreductase laccase ND448_03760 PF00004 ATPase family associated with various cellular activities (AAA) ND448_03760 PF07724 AAA domain (Cdc48 subfamily) ND448_03760 PF02861 Clp amino terminal domain, pathogenicity island component ND448_03760 PF10431 C-terminal, D2-small domain, of ClpB protein ND448_03760 PF17871 AAA lid domain ND448_03795 PF03372 Endonuclease/Exonuclease/phosphatase family ND448_03800 PF01476 LysM domain ND448_03800 PF01464 Transglycosylase SLT domain ND448_03805 PF00753 Metallo-beta-lactamase superfamily ND448_03805 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND448_03810 PF08241 Methyltransferase domain ND448_03815 PF00075 RNase H ND448_03820 PF00929 Exonuclease ND448_03830 PF09317 Domain of unknown function (DUF1974) ND448_03830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND448_03830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND448_03835 PF13580 SIS domain ND448_03840 PF13230 Glutamine amidotransferases class-II ND448_03845 PF03734 L,D-transpeptidase catalytic domain ND448_03850 PF11973 NQRA C-terminal domain ND448_03850 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ND448_03855 PF03116 NQR2, RnfD, RnfE family ND448_03860 PF04205 FMN-binding domain ND448_03865 PF02508 Rnf-Nqr subunit, membrane protein ND448_03870 PF02508 Rnf-Nqr subunit, membrane protein ND448_03875 PF00175 Oxidoreductase NAD-binding domain ND448_03875 PF00970 Oxidoreductase FAD-binding domain ND448_03875 PF00111 2Fe-2S iron-sulfur cluster binding domain ND448_03880 PF02424 ApbE family ND448_03885 PF04400 (Na+)-NQR maturation NqrM ND448_03890 PF03009 Glycerophosphoryl diester phosphodiesterase family ND448_03895 PF00817 impB/mucB/samB family ND448_03895 PF11799 impB/mucB/samB family C-terminal domain ND448_03895 PF11798 IMS family HHH motif ND448_03900 PF01546 Peptidase family M20/M25/M40 ND448_03900 PF07687 Peptidase dimerisation domain ND448_03905 PF00156 Phosphoribosyl transferase domain ND448_03910 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND448_03915 PF07417 Sigma factor-binding transcriptional regulator Crl ND448_03920 PF00696 Amino acid kinase family ND448_03920 PF01472 PUA domain ND448_03925 PF00171 Aldehyde dehydrogenase family ND448_03930 PF07238 PilZ domain ND448_03930 PF07317 Flagellar regulator YcgR ND448_03955 PF07715 TonB-dependent Receptor Plug Domain ND448_03955 PF00593 TonB dependent receptor ND448_03960 PF01202 Shikimate kinase ND448_03980 PF07302 AroM protein ND448_03985 PF06865 Pyrimidine/purine nucleoside phosphorylase ND448_03990 PF04381 Putative exonuclease, RdgC ND448_03995 PF00480 ROK family ND448_04000 PF13476 AAA domain ND448_04005 PF00149 Calcineurin-like phosphoesterase ND448_04005 PF12320 Type 5 capsule protein repressor C-terminal domain ND448_04010 PF00072 Response regulator receiver domain ND448_04010 PF00486 Transcriptional regulatory protein, C terminal ND448_04015 PF00989 PAS fold ND448_04015 PF11808 Phosphate regulon sensor protein PhoR ND448_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_04015 PF00512 His Kinase A (phospho-acceptor) domain ND448_04020 PF12849 PBP superfamily domain ND448_04025 PF05525 Branched-chain amino acid transport protein ND448_04030 PF00324 Amino acid permease ND448_04035 PF00128 Alpha amylase, catalytic domain ND448_04035 PF02903 Alpha amylase, N-terminal ig-like domain ND448_04045 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND448_04045 PF00578 AhpC/TSA family ND448_04050 PF04336 Acyl carrier protein phosphodiesterase ND448_04055 PF02547 Queuosine biosynthesis protein ND448_04060 PF01702 Queuine tRNA-ribosyltransferase ND448_04065 PF02699 Preprotein translocase subunit ND448_04070 PF02355 Protein export membrane protein ND448_04070 PF07549 SecD/SecF GG Motif ND448_04070 PF13721 SecD export protein N-terminal TM region ND448_04075 PF07549 SecD/SecF GG Motif ND448_04075 PF02355 Protein export membrane protein ND448_04080 PF03477 ATP cone domain ND448_04085 PF01872 RibD C-terminal domain ND448_04085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND448_04090 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND448_04095 PF01029 NusB family ND448_04100 PF00586 AIR synthase related protein, N-terminal domain ND448_04100 PF02769 AIR synthase related protein, C-terminal domain ND448_04105 PF04608 Phosphatidylglycerophosphatase A ND448_04110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND448_04110 PF02779 Transketolase, pyrimidine binding domain ND448_04110 PF02780 Transketolase, C-terminal domain ND448_04115 PF00348 Polyprenyl synthetase ND448_04120 PF02609 Exonuclease VII small subunit ND448_04125 PF02568 Thiamine biosynthesis protein (ThiI) ND448_04125 PF02926 THUMP domain ND448_04130 PF02954 Bacterial regulatory protein, Fis family ND448_04130 PF00072 Response regulator receiver domain ND448_04130 PF14532 Sigma-54 interaction domain ND448_04135 PF00672 HAMP domain ND448_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_04135 PF00512 His Kinase A (phospho-acceptor) domain ND448_04145 PF07690 Major Facilitator Superfamily ND448_04150 PF01965 DJ-1/PfpI family ND448_04155 PF02558 Ketopantoate reductase PanE/ApbA ND448_04155 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND448_04160 PF04461 Protein of unknown function (DUF520) ND448_04165 PF07690 Major Facilitator Superfamily ND448_04170 PF01040 UbiA prenyltransferase family ND448_04175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND448_04180 PF00510 Cytochrome c oxidase subunit III ND448_04185 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND448_04190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND448_04190 PF06481 COX Aromatic Rich Motif ND448_04195 PF03502 Nucleoside-specific channel-forming protein, Tsx ND448_04200 PF07690 Major Facilitator Superfamily ND448_04205 PF03923 Uncharacterized lipoprotein ND448_04205 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND448_04210 PF01722 BolA-like protein ND448_04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND448_04215 PF05698 Bacterial trigger factor protein (TF) C-terminus ND448_04215 PF05697 Bacterial trigger factor protein (TF) ND448_04220 PF00574 Clp protease ND448_04225 PF06689 ClpX C4-type zinc finger ND448_04225 PF10431 C-terminal, D2-small domain, of ClpB protein ND448_04225 PF07724 AAA domain (Cdc48 subfamily) ND448_04230 PF00004 ATPase family associated with various cellular activities (AAA) ND448_04230 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND448_04230 PF05362 Lon protease (S16) C-terminal proteolytic domain ND448_04235 PF00216 Bacterial DNA-binding protein ND448_04240 PF13145 PPIC-type PPIASE domain ND448_04255 PF06508 Queuosine biosynthesis protein QueC ND448_04260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_04260 PF12793 Sugar transport-related sRNA regulator N-term ND448_04275 PF01037 Lrp/AsnC ligand binding domain ND448_04275 PF13404 AsnC-type helix-turn-helix domain ND448_04280 PF00664 ABC transporter transmembrane region ND448_04280 PF00005 ABC transporter ND448_04285 PF00664 ABC transporter transmembrane region ND448_04285 PF00005 ABC transporter ND448_04290 PF00543 Nitrogen regulatory protein P-II ND448_04295 PF00909 Ammonium Transporter Family ND448_04305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND448_04315 PF05321 Haemolysin expression modulating protein ND448_04320 PF10757 Biofilm formation regulator YbaJ ND448_04330 PF00444 Ribosomal protein L36 ND448_04335 PF01197 Ribosomal protein L31 ND448_04340 PF00873 AcrB/AcrD/AcrF family ND448_04345 PF00529 HlyD membrane-fusion protein of T1SS ND448_04345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND448_04350 PF08361 MAATS-type transcriptional repressor, C-terminal region ND448_04350 PF00440 Bacterial regulatory proteins, tetR family ND448_04355 PF02635 DsrE/DsrF-like family ND448_04360 PF12795 Mechanosensitive ion channel porin domain ND448_04360 PF00924 Mechanosensitive ion channel ND448_04360 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND448_04365 PF10689 Protein of unknown function (DUF2496) ND448_04375 PF04304 Protein of unknown function (DUF454) ND448_04380 PF00156 Phosphoribosyl transferase domain ND448_04385 PF01970 Tripartite tricarboxylate transporter TctA family ND448_04400 PF00072 Response regulator receiver domain ND448_04400 PF00486 Transcriptional regulatory protein, C terminal ND448_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_04405 PF00512 His Kinase A (phospho-acceptor) domain ND448_04410 PF12169 DNA polymerase III subunits gamma and tau domain III ND448_04410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND448_04410 PF12170 DNA polymerase III tau subunit V interacting with alpha ND448_04415 PF02575 YbaB/EbfC DNA-binding family ND448_04420 PF13662 Toprim domain ND448_04420 PF02132 RecR protein ND448_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_04425 PF00183 Hsp90 protein ND448_04430 PF05191 Adenylate kinase, active site lid ND448_04435 PF00762 Ferrochelatase ND448_04440 PF02706 Chain length determinant protein ND448_04445 PF00294 pfkB family carbohydrate kinase ND448_04450 PF02254 TrkA-N domain ND448_04450 PF00999 Sodium/hydrogen exchanger family ND448_04455 PF00149 Calcineurin-like phosphoesterase ND448_04455 PF02872 5'-nucleotidase, C-terminal domain ND448_04460 PF04073 Aminoacyl-tRNA editing domain ND448_04465 PF01963 TraB family ND448_04470 PF00403 Heavy-metal-associated domain ND448_04475 PF13411 MerR HTH family regulatory protein ND448_04480 PF01957 NfeD-like C-terminal, partner-binding ND448_04485 PF16200 C-terminal region of band_7 ND448_04485 PF01145 SPFH domain / Band 7 family ND448_04490 PF00085 Thioredoxin ND448_04495 PF00106 short chain dehydrogenase ND448_04500 PF13472 GDSL-like Lipase/Acylhydrolase family ND448_04505 PF00005 ABC transporter ND448_04515 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND448_04515 PF02222 ATP-grasp domain ND448_04520 PF00731 AIR carboxylase ND448_04525 PF00149 Calcineurin-like phosphoesterase ND448_04530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND448_04535 PF01406 tRNA synthetases class I (C) catalytic domain ND448_04535 PF09190 DALR domain ND448_04550 PF00419 Fimbrial protein ND448_04555 PF13953 PapC C-terminal domain ND448_04555 PF13954 PapC N-terminal domain ND448_04555 PF00577 Outer membrane usher protein ND448_04560 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_04560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_04595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND448_04595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND448_04605 PF01022 Bacterial regulatory protein, arsR family ND448_04610 PF02040 Arsenical pump membrane protein ND448_04615 PF03960 ArsC family ND448_04625 PF00501 AMP-binding enzyme ND448_04650 PF01292 Prokaryotic cytochrome b561 ND448_04660 PF00343 Carbohydrate phosphorylase ND448_04670 PF00072 Response regulator receiver domain ND448_04670 PF00486 Transcriptional regulatory protein, C terminal ND448_04680 PF00483 Nucleotidyl transferase ND448_04690 PF00535 Glycosyl transferase family 2 ND448_04690 PF03552 Cellulose synthase ND448_04690 PF07238 PilZ domain ND448_04710 PF00703 Glycosyl hydrolases family 2 ND448_04710 PF16355 Domain of unknown function (DUF4982) ND448_04710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND448_04710 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND448_04715 PF01627 Hpt domain ND448_04715 PF00072 Response regulator receiver domain ND448_04715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND448_04715 PF00512 His Kinase A (phospho-acceptor) domain ND448_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_04715 PF00672 HAMP domain ND448_04720 PF00072 Response regulator receiver domain ND448_04720 PF00990 Diguanylate cyclase, GGDEF domain ND448_04725 PF00440 Bacterial regulatory proteins, tetR family ND448_04755 PF00196 Bacterial regulatory proteins, luxR family ND448_04760 PF00313 'Cold-shock' DNA-binding domain ND448_04765 PF00313 'Cold-shock' DNA-binding domain ND448_04770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND448_04780 PF00990 Diguanylate cyclase, GGDEF domain ND448_04780 PF05230 MASE2 domain ND448_04785 PF02416 mttA/Hcf106 family ND448_04790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND448_04790 PF04055 Radical SAM superfamily ND448_04795 PF03099 Biotin/lipoate A/B protein ligase family ND448_04800 PF04359 Protein of unknown function (DUF493) ND448_04805 PF07943 Penicillin-binding protein 5, C-terminal domain ND448_04805 PF00768 D-alanyl-D-alanine carboxypeptidase ND448_04810 PF05036 Sporulation related domain ND448_04810 PF03330 Lytic transglycolase ND448_04815 PF01098 Cell cycle protein ND448_04820 PF03717 Penicillin-binding Protein dimerisation domain ND448_04820 PF00905 Penicillin binding protein transpeptidase domain ND448_04825 PF02590 Predicted SPOUT methyltransferase ND448_04835 PF01467 Cytidylyltransferase-like ND448_04840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND448_04840 PF06144 DNA polymerase III, delta subunit ND448_04845 PF04390 Lipopolysaccharide-assembly ND448_04850 PF00133 tRNA synthetases class I (I, L, M and V) ND448_04850 PF08264 Anticodon-binding domain of tRNA ND448_04850 PF13603 Leucyl-tRNA synthetase, Domain 2 ND448_04855 PF07295 Zinc-ribbon containing domain ND448_04860 PF00005 ABC transporter ND448_04865 PF00528 Binding-protein-dependent transport system inner membrane component ND448_04870 PF00528 Binding-protein-dependent transport system inner membrane component ND448_04875 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_04880 PF00795 Carbon-nitrogen hydrolase ND448_04885 PF00571 CBS domain ND448_04885 PF03471 Transporter associated domain ND448_04890 PF02130 Uncharacterized protein family UPF0054 ND448_04895 PF02562 PhoH-like protein ND448_04900 PF01938 TRAM domain ND448_04900 PF04055 Radical SAM superfamily ND448_04900 PF00919 Uncharacterized protein family UPF0004 ND448_04905 PF01494 FAD binding domain ND448_04940 PF00733 Asparagine synthase ND448_04940 PF13537 Glutamine amidotransferase domain ND448_04945 PF13344 Haloacid dehalogenase-like hydrolase ND448_04950 PF01047 MarR family ND448_04950 PF00480 ROK family ND448_04955 PF01979 Amidohydrolase family ND448_04960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND448_04965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND448_04965 PF02378 Phosphotransferase system, EIIC ND448_04965 PF00367 phosphotransferase system, EIIB ND448_04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND448_04970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND448_04975 PF03573 outer membrane porin, OprD family ND448_04980 PF13982 YbfN-like lipoprotein ND448_04985 PF03173 Putative carbohydrate binding domain ND448_04985 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ND448_04985 PF00728 Glycosyl hydrolase family 20, catalytic domain ND448_04985 PF02838 Glycosyl hydrolase family 20, domain 2 ND448_04990 PF01475 Ferric uptake regulator family ND448_04995 PF00258 Flavodoxin ND448_05000 PF02203 Tar ligand binding domain homologue ND448_05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_05000 PF00672 HAMP domain ND448_05005 PF01402 Ribbon-helix-helix protein, copG family ND448_05010 PF12697 Alpha/beta hydrolase family ND448_05015 PF03925 SeqA protein C-terminal domain ND448_05015 PF17206 SeqA protein N-terminal domain ND448_05020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND448_05020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND448_05020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND448_05020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND448_05030 PF00072 Response regulator receiver domain ND448_05030 PF00486 Transcriptional regulatory protein, C terminal ND448_05035 PF02702 Osmosensitive K+ channel His kinase sensor domain ND448_05035 PF00512 His Kinase A (phospho-acceptor) domain ND448_05035 PF13493 Domain of unknown function (DUF4118) ND448_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_05035 PF13492 GAF domain ND448_05040 PF02669 K+-transporting ATPase, c chain ND448_05050 PF03814 Potassium-transporting ATPase A subunit ND448_05055 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND448_05060 PF10725 Protein of unknown function (DUF2517) ND448_05065 PF08349 Protein of unknown function (DUF1722) ND448_05070 PF03441 FAD binding domain of DNA photolyase ND448_05070 PF00875 DNA photolyase ND448_05075 PF02112 cAMP phosphodiesterases class-II ND448_05080 PF01784 NIF3 (NGG1p interacting factor 3) ND448_05085 PF02682 Carboxyltransferase domain, subdomain C and D ND448_05090 PF02626 Carboxyltransferase domain, subdomain A and B ND448_05095 PF03746 LamB/YcsF family ND448_05110 PF01470 Pyroglutamyl peptidase ND448_05120 PF00285 Citrate synthase, C-terminal domain ND448_05125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND448_05130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND448_05135 PF00890 FAD binding domain ND448_05135 PF02910 Fumarate reductase flavoprotein C-term ND448_05140 PF13085 2Fe-2S iron-sulfur cluster binding domain ND448_05145 PF16078 2-oxoglutarate dehydrogenase N-terminus ND448_05145 PF00676 Dehydrogenase E1 component ND448_05145 PF16870 2-oxoglutarate dehydrogenase C-terminal ND448_05145 PF02779 Transketolase, pyrimidine binding domain ND448_05150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND448_05150 PF00364 Biotin-requiring enzyme ND448_05150 PF02817 e3 binding domain ND448_05155 PF08442 ATP-grasp domain ND448_05155 PF00549 CoA-ligase ND448_05160 PF02629 CoA binding domain ND448_05160 PF00549 CoA-ligase ND448_05165 PF00149 Calcineurin-like phosphoesterase ND448_05165 PF02872 5'-nucleotidase, C-terminal domain ND448_05170 PF01654 Cytochrome bd terminal oxidase subunit I ND448_05175 PF02322 Cytochrome bd terminal oxidase subunit II ND448_05180 PF08173 Membrane bound YbgT-like protein ND448_05185 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND448_05190 PF03061 Thioesterase superfamily ND448_05195 PF01618 MotA/TolQ/ExbB proton channel family ND448_05200 PF02472 Biopolymer transport protein ExbD/TolR ND448_05205 PF06519 TolA C-terminal ND448_05205 PF06519 TolA C-terminal ND448_05210 PF04052 TolB amino-terminal domain ND448_05210 PF07676 WD40-like Beta Propeller Repeat ND448_05215 PF00691 OmpA family ND448_05220 PF13174 Tetratricopeptide repeat ND448_05220 PF16331 TolA binding protein trimerisation ND448_05250 PF02445 Quinolinate synthetase A protein ND448_05255 PF04973 Nicotinamide mononucleotide transporter ND448_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_05260 PF00512 His Kinase A (phospho-acceptor) domain ND448_05260 PF01627 Hpt domain ND448_05260 PF00072 Response regulator receiver domain ND448_05260 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_05260 PF00989 PAS fold ND448_05265 PF00196 Bacterial regulatory proteins, luxR family ND448_05265 PF00072 Response regulator receiver domain ND448_05270 PF00793 DAHP synthetase I family ND448_05275 PF00300 Histidine phosphatase superfamily (branch 1) ND448_05285 PF01263 Aldose 1-epimerase ND448_05290 PF10509 Galactokinase galactose-binding signature ND448_05290 PF08544 GHMP kinases C terminal ND448_05290 PF00288 GHMP kinases N terminal domain ND448_05295 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND448_05295 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND448_05300 PF16363 GDP-mannose 4,6 dehydratase ND448_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_05315 PF03459 TOBE domain ND448_05320 PF10766 Multidrug efflux pump-associated protein AcrZ ND448_05330 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05335 PF00005 ABC transporter ND448_05335 PF03459 TOBE domain ND448_05345 PF10282 Lactonase, 7-bladed beta-propeller ND448_05350 PF00202 Aminotransferase class-III ND448_05355 PF06968 Biotin and Thiamin Synthesis associated domain ND448_05355 PF04055 Radical SAM superfamily ND448_05360 PF00155 Aminotransferase class I and II ND448_05365 PF08241 Methyltransferase domain ND448_05375 PF00005 ABC transporter ND448_05380 PF00271 Helicase conserved C-terminal domain ND448_05380 PF17757 UvrB interaction domain ND448_05380 PF04851 Type III restriction enzyme, res subunit ND448_05380 PF02151 UvrB/uvrC motif ND448_05380 PF12344 Ultra-violet resistance protein B ND448_05385 PF09905 DNA-binding protein VF530 ND448_05400 PF01032 FecCD transport family ND448_05405 PF00005 ABC transporter ND448_05410 PF01933 Uncharacterised protein family UPF0052 ND448_05415 PF06463 Molybdenum Cofactor Synthesis C ND448_05415 PF04055 Radical SAM superfamily ND448_05420 PF01967 MoaC family ND448_05425 PF02597 ThiS family ND448_05430 PF02391 MoaE protein ND448_05435 PF01027 Inhibitor of apoptosis-promoting Bax1 ND448_05450 PF00005 ABC transporter ND448_05455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND448_05460 PF09209 Tetracyclin repressor-like, C-terminal domain ND448_05460 PF00440 Bacterial regulatory proteins, tetR family ND448_05465 PF00270 DEAD/DEAH box helicase ND448_05465 PF00271 Helicase conserved C-terminal domain ND448_05470 PF01207 Dihydrouridine synthase (Dus) ND448_05480 PF00768 D-alanyl-D-alanine carboxypeptidase ND448_05485 PF01565 FAD binding domain ND448_05485 PF09330 D-lactate dehydrogenase, membrane binding ND448_05490 PF01928 CYTH domain ND448_05495 PF01844 HNH endonuclease ND448_05505 PF04226 Transglycosylase associated protein ND448_05510 PF00005 ABC transporter ND448_05520 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05525 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05530 PF07308 Protein of unknown function (DUF1456) ND448_05535 PF00581 Rhodanese-like domain ND448_05540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND448_05545 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05550 PF00005 ABC transporter ND448_05555 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05560 PF13520 Amino acid permease ND448_05565 PF01276 Orn/Lys/Arg decarboxylase, major domain ND448_05565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND448_05565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND448_05575 PF00892 EamA-like transporter family ND448_05580 PF00267 Gram-negative porin ND448_05585 PF13307 Helicase C-terminal domain ND448_05585 PF06733 DEAD_2 ND448_05590 PF02885 Glycosyl transferase family, helical bundle domain ND448_05595 PF05971 RNA methyltransferase ND448_05600 PF00005 ABC transporter ND448_05605 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05610 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_05615 PF00210 Ferritin-like domain ND448_05620 PF13649 Methyltransferase domain ND448_05625 PF00892 EamA-like transporter family ND448_05630 PF13505 Outer membrane protein beta-barrel domain ND448_05635 PF03448 MgtE intracellular N domain ND448_05635 PF01769 Divalent cation transporter ND448_05635 PF00571 CBS domain ND448_05640 PF01545 Cation efflux family ND448_05640 PF16916 Dimerisation domain of Zinc Transporter ND448_05645 PF00005 ABC transporter ND448_05645 PF12848 ABC transporter ND448_05650 PF00899 ThiF family ND448_05655 PF03454 MoeA C-terminal region (domain IV) ND448_05655 PF03453 MoeA N-terminal region (domain I and II) ND448_05655 PF00994 Probable molybdopterin binding domain ND448_05665 PF00756 Putative esterase ND448_05670 PF08240 Alcohol dehydrogenase GroES-like domain ND448_05670 PF00107 Zinc-binding dehydrogenase ND448_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_05675 PF03466 LysR substrate binding domain ND448_05680 PF06779 Uncharacterised MFS-type transporter YbfB ND448_05685 PF01227 GTP cyclohydrolase I ND448_05690 PF04235 Protein of unknown function (DUF418) ND448_05695 PF00356 Bacterial regulatory proteins, lacI family ND448_05700 PF13407 Periplasmic binding protein domain ND448_05705 PF00005 ABC transporter ND448_05710 PF02653 Branched-chain amino acid transport system / permease component ND448_05715 PF02698 DUF218 domain ND448_05720 PF00390 Malic enzyme, N-terminal domain ND448_05720 PF03949 Malic enzyme, NAD binding domain ND448_05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_05730 PF03466 LysR substrate binding domain ND448_05735 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND448_05735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND448_05740 PF04172 LrgB-like family ND448_05745 PF03788 LrgA family ND448_05755 PF01588 Putative tRNA binding domain ND448_05755 PF09334 tRNA synthetases class I (M) ND448_05760 PF10609 NUBPL iron-transfer P-loop NTPase ND448_05765 PF00485 Phosphoribulokinase / Uridine kinase family ND448_05770 PF00692 dUTPase ND448_05775 PF05170 AsmA family ND448_05780 PF03606 C4-dicarboxylate anaerobic carrier ND448_05785 PF00571 CBS domain ND448_05785 PF03471 Transporter associated domain ND448_05785 PF03741 Integral membrane protein TerC family ND448_05790 PF00483 Nucleotidyl transferase ND448_05795 PF00483 Nucleotidyl transferase ND448_05800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND448_05800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND448_05810 PF01502 Phosphoribosyl-AMP cyclohydrolase ND448_05810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND448_05815 PF00977 Histidine biosynthesis protein ND448_05820 PF00977 Histidine biosynthesis protein ND448_05825 PF00117 Glutamine amidotransferase class-I ND448_05830 PF00475 Imidazoleglycerol-phosphate dehydratase ND448_05835 PF00155 Aminotransferase class I and II ND448_05840 PF00815 Histidinol dehydrogenase ND448_05845 PF01634 ATP phosphoribosyltransferase ND448_05845 PF08029 HisG, C-terminal domain ND448_05855 PF01370 NAD dependent epimerase/dehydratase family ND448_05860 PF00043 Glutathione S-transferase, C-terminal domain ND448_05860 PF13417 Glutathione S-transferase, N-terminal domain ND448_05875 PF01053 Cys/Met metabolism PLP-dependent enzyme ND448_05880 PF00571 CBS domain ND448_05880 PF00291 Pyridoxal-phosphate dependent enzyme ND448_05885 PF07943 Penicillin-binding protein 5, C-terminal domain ND448_05885 PF00768 D-alanyl-D-alanine carboxypeptidase ND448_05890 PF03313 Serine dehydratase alpha chain ND448_05890 PF03315 Serine dehydratase beta chain ND448_05900 PF00455 DeoR C terminal sensor domain ND448_05900 PF08220 DeoR-like helix-turn-helix domain ND448_05905 PF01791 DeoC/LacD family aldolase ND448_05910 PF01569 PAP2 superfamily ND448_05920 PF06826 Predicted Permease Membrane Region ND448_05920 PF02080 TrkA-C domain ND448_05925 PF00462 Glutaredoxin ND448_05930 PF07214 Protein of unknown function (DUF1418) ND448_05935 PF10722 Putative bacterial sensory transduction regulator ND448_05940 PF13416 Bacterial extracellular solute-binding protein ND448_05945 PF00005 ABC transporter ND448_05945 PF08402 TOBE domain ND448_05950 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05955 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05960 PF10767 Protein of unknown function (DUF2593) ND448_05965 PF05958 tRNA (Uracil-5-)-methyltransferase ND448_05970 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_05975 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05980 PF00528 Binding-protein-dependent transport system inner membrane component ND448_05985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_05990 PF00005 ABC transporter ND448_05995 PF12883 Protein of unknown function (DUF3828) ND448_06000 PF01906 Putative heavy-metal-binding ND448_06005 PF01370 NAD dependent epimerase/dehydratase family ND448_06010 PF11066 Protein of unknown function (DUF2867) ND448_06010 PF13460 NAD(P)H-binding ND448_06015 PF01212 Beta-eliminating lyase ND448_06020 PF00175 Oxidoreductase NAD-binding domain ND448_06020 PF00111 2Fe-2S iron-sulfur cluster binding domain ND448_06020 PF00970 Oxidoreductase FAD-binding domain ND448_06025 PF03063 Prismane/CO dehydrogenase family ND448_06030 PF03956 Lysine exporter LysO ND448_06035 PF11398 Protein of unknown function (DUF2813) ND448_06040 PF04393 Protein of unknown function (DUF535) ND448_06045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND448_06050 PF00005 ABC transporter ND448_06050 PF02687 FtsX-like permease family ND448_06050 PF12704 MacB-like periplasmic core domain ND448_06055 PF00313 'Cold-shock' DNA-binding domain ND448_06060 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND448_06065 PF00004 ATPase family associated with various cellular activities (AAA) ND448_06065 PF17871 AAA lid domain ND448_06065 PF02861 Clp amino terminal domain, pathogenicity island component ND448_06065 PF10431 C-terminal, D2-small domain, of ClpB protein ND448_06065 PF07724 AAA domain (Cdc48 subfamily) ND448_06070 PF01176 Translation initiation factor 1A / IF-1 ND448_06075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND448_06080 PF00005 ABC transporter ND448_06080 PF00664 ABC transporter transmembrane region ND448_06085 PF00664 ABC transporter transmembrane region ND448_06085 PF00005 ABC transporter ND448_06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_06095 PF01037 Lrp/AsnC ligand binding domain ND448_06100 PF17854 FtsK alpha domain ND448_06100 PF09397 Ftsk gamma domain ND448_06100 PF01580 FtsK/SpoIIIE family ND448_06100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND448_06105 PF03548 Outer membrane lipoprotein carrier protein LolA ND448_06110 PF00004 ATPase family associated with various cellular activities (AAA) ND448_06110 PF16193 AAA C-terminal domain ND448_06110 PF12002 MgsA AAA+ ATPase C terminal ND448_06115 PF02403 Seryl-tRNA synthetase N-terminal domain ND448_06115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND448_06120 PF07690 Major Facilitator Superfamily ND448_06125 PF04055 Radical SAM superfamily ND448_06130 PF01228 Glycine radical ND448_06130 PF02901 Pyruvate formate lyase-like ND448_06135 PF01226 Formate/nitrite transporter ND448_06140 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND448_06140 PF18381 YcaO cyclodehydratase C-terminal domain ND448_06145 PF00710 Asparaginase, N-terminal ND448_06145 PF17763 Glutaminase/Asparaginase C-terminal domain ND448_06150 PF00266 Aminotransferase class-V ND448_06155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND448_06160 PF02224 Cytidylate kinase ND448_06165 PF00575 S1 RNA binding domain ND448_06170 PF00216 Bacterial DNA-binding protein ND448_06175 PF03772 Competence protein ND448_06175 PF00753 Metallo-beta-lactamase superfamily ND448_06180 PF00005 ABC transporter ND448_06180 PF00664 ABC transporter transmembrane region ND448_06185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND448_06190 PF07063 Domain of unknown function (DUF1338) ND448_06195 PF00313 'Cold-shock' DNA-binding domain ND448_06200 PF00313 'Cold-shock' DNA-binding domain ND448_06205 PF03966 Trm112p-like protein ND448_06210 PF02348 Cytidylyltransferase ND448_06215 PF01636 Phosphotransferase enzyme family ND448_06220 PF02698 DUF218 domain ND448_06225 PF13847 Methyltransferase domain ND448_06230 PF03882 MukF winged-helix domain ND448_06230 PF17193 MukF C-terminal domain ND448_06230 PF17192 MukF middle domain ND448_06235 PF04288 MukE-like family ND448_06240 PF04310 MukB N-terminal ND448_06240 PF16330 MukB hinge domain ND448_06245 PF01471 Putative peptidoglycan binding domain ND448_06245 PF03734 L,D-transpeptidase catalytic domain ND448_06250 PF05951 Bacterial protein of unknown function (DUF882) ND448_06255 PF00753 Metallo-beta-lactamase superfamily ND448_06260 PF00155 Aminotransferase class I and II ND448_06265 PF00267 Gram-negative porin ND448_06270 PF00152 tRNA synthetases class II (D, K and N) ND448_06270 PF01336 OB-fold nucleic acid binding domain ND448_06275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND448_06275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND448_06280 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND448_06280 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND448_06280 PF01433 Peptidase family M1 domain ND448_06285 PF01180 Dihydroorotate dehydrogenase ND448_06290 PF07126 Cell-division protein ZapC ND448_06295 PF03473 MOSC domain ND448_06295 PF03476 MOSC N-terminal beta barrel domain ND448_06295 PF00111 2Fe-2S iron-sulfur cluster binding domain ND448_06300 PF02926 THUMP domain ND448_06300 PF10672 S-adenosylmethionine-dependent methyltransferase ND448_06300 PF01170 Putative RNA methylase family UPF0020 ND448_06305 PF16326 ABC transporter C-terminal domain ND448_06305 PF00005 ABC transporter ND448_06305 PF12848 ABC transporter ND448_06310 PF04403 Paraquat-inducible protein A ND448_06315 PF02470 MlaD protein ND448_06320 PF03886 ABC-type transport auxiliary lipoprotein component ND448_06325 PF04957 Ribosome modulation factor ND448_06330 PF07977 FabA-like domain ND448_06335 PF13654 AAA domain ND448_06335 PF05362 Lon protease (S16) C-terminal proteolytic domain ND448_06340 PF06303 MatP N-terminal domain ND448_06340 PF17414 MatP C-terminal ribbon-helix-helix domain ND448_06345 PF00691 OmpA family ND448_06345 PF01389 OmpA-like transmembrane domain ND448_06350 PF03846 Cell division inhibitor SulA ND448_06355 PF04994 TfoX C-terminal domain ND448_06355 PF04993 TfoX N-terminal domain ND448_06360 PF12805 FUSC-like inner membrane protein yccS ND448_06365 PF03733 Inner membrane component domain ND448_06370 PF12462 DNA helicase IV / RNA helicase N terminal ND448_06370 PF00580 UvrD/REP helicase N-terminal domain ND448_06370 PF13361 UvrD-like helicase C-terminal domain ND448_06375 PF02142 MGS-like domain ND448_06380 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND448_06385 PF13380 CoA binding domain ND448_06390 PF08755 Hemimethylated DNA-binding protein YccV like ND448_06395 PF17785 PUA-like domain ND448_06395 PF10672 S-adenosylmethionine-dependent methyltransferase ND448_06400 PF00708 Acylphosphatase ND448_06405 PF04358 DsrC like protein ND448_06415 PF00484 Carbonic anhydrase ND448_06420 PF02080 TrkA-C domain ND448_06420 PF00999 Sodium/hydrogen exchanger family ND448_06420 PF03471 Transporter associated domain ND448_06430 PF01757 Acyltransferase family ND448_06435 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND448_06440 PF00535 Glycosyl transferase family 2 ND448_06450 PF01797 Transposase IS200 like ND448_06455 PF12323 Helix-turn-helix domain ND448_06455 PF01385 Probable transposase ND448_06455 PF07282 Putative transposase DNA-binding domain ND448_06460 PF00854 POT family ND448_06470 PF03279 Bacterial lipid A biosynthesis acyltransferase ND448_06475 PF00581 Rhodanese-like domain ND448_06475 PF12368 Rhodanase C-terminal ND448_06475 PF17773 UPF0176 acylphosphatase like domain ND448_06480 PF01594 AI-2E family transporter ND448_06485 PF00196 Bacterial regulatory proteins, luxR family ND448_06490 PF01266 FAD dependent oxidoreductase ND448_06495 PF13991 BssS protein family ND448_06500 PF06183 DinI-like family ND448_06505 PF01979 Amidohydrolase family ND448_06510 PF03992 Antibiotic biosynthesis monooxygenase ND448_06520 PF12111 Polyribonucleotide phosphorylase C terminal ND448_06520 PF10150 Ribonuclease E/G family ND448_06520 PF00575 S1 RNA binding domain ND448_06525 PF00849 RNA pseudouridylate synthase ND448_06525 PF01479 S4 domain ND448_06530 PF02545 Maf-like protein ND448_06535 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND448_06540 PF01783 Ribosomal L32p protein family ND448_06545 PF02504 Fatty acid synthesis protein ND448_06550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND448_06550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND448_06555 PF00698 Acyl transferase domain ND448_06565 PF00550 Phosphopantetheine attachment site ND448_06570 PF02801 Beta-ketoacyl synthase, C-terminal domain ND448_06570 PF00109 Beta-ketoacyl synthase, N-terminal domain ND448_06575 PF01063 Amino-transferase class IV ND448_06580 PF02618 YceG-like family ND448_06585 PF02223 Thymidylate kinase ND448_06590 PF09115 DNA polymerase III, delta subunit, C terminal ND448_06595 PF01026 TatD related DNase ND448_06600 PF00367 phosphotransferase system, EIIB ND448_06600 PF02378 Phosphotransferase system, EIIC ND448_06605 PF01230 HIT domain ND448_06610 PF07233 Protein of unknown function (DUF1425) ND448_06615 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND448_06615 PF13036 Peptidoglycan-synthase activator LpoB ND448_06620 PF01636 Phosphotransferase enzyme family ND448_06625 PF00933 Glycosyl hydrolase family 3 N terminal domain ND448_06630 PF05728 Uncharacterised protein family (UPF0227) ND448_06635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_06640 PF05433 Glycine zipper 2TM domain ND448_06645 PF02559 CarD-like/TRCF domain ND448_06645 PF00270 DEAD/DEAH box helicase ND448_06645 PF00271 Helicase conserved C-terminal domain ND448_06645 PF03461 TRCF domain ND448_06645 PF17757 UvrB interaction domain ND448_06650 PF02687 FtsX-like permease family ND448_06650 PF12704 MacB-like periplasmic core domain ND448_06655 PF00005 ABC transporter ND448_06660 PF02687 FtsX-like permease family ND448_06660 PF12704 MacB-like periplasmic core domain ND448_06665 PF00480 ROK family ND448_06670 PF02146 Sir2 family ND448_06675 PF01546 Peptidase family M20/M25/M40 ND448_06675 PF07687 Peptidase dimerisation domain ND448_06680 PF08007 Cupin superfamily protein ND448_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_06685 PF08918 PhoQ Sensor ND448_06690 PF00072 Response regulator receiver domain ND448_06690 PF00486 Transcriptional regulatory protein, C terminal ND448_06700 PF08328 Adenylosuccinate lyase C-terminal ND448_06700 PF00206 Lyase ND448_06705 PF04356 Protein of unknown function (DUF489) ND448_06715 PF00293 NUDIX domain ND448_06720 PF00849 RNA pseudouridylate synthase ND448_06725 PF00180 Isocitrate/isopropylmalate dehydrogenase ND448_06730 PF03472 Autoinducer binding domain ND448_06730 PF00196 Bacterial regulatory proteins, luxR family ND448_06735 PF00765 Autoinducer synthase ND448_06740 PF00232 Glycosyl hydrolase family 1 ND448_06750 PF01432 Peptidase family M3 ND448_06755 PF00672 HAMP domain ND448_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_06755 PF02203 Tar ligand binding domain homologue ND448_06775 PF01797 Transposase IS200 like ND448_06780 PF12323 Helix-turn-helix domain ND448_06780 PF01385 Probable transposase ND448_06780 PF07282 Putative transposase DNA-binding domain ND448_06790 PF00072 Response regulator receiver domain ND448_06795 PF17203 Single cache domain 3 ND448_06795 PF00989 PAS fold ND448_06795 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND448_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_06800 PF00939 Sodium:sulfate symporter transmembrane region ND448_06805 PF08548 Peptidase M10 serralysin C terminal ND448_06805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND448_06805 PF00413 Matrixin ND448_06810 PF02974 Protease inhibitor Inh ND448_06815 PF00005 ABC transporter ND448_06815 PF00664 ABC transporter transmembrane region ND448_06820 PF00529 HlyD membrane-fusion protein of T1SS ND448_06825 PF02321 Outer membrane efflux protein ND448_06840 PF02311 AraC-like ligand binding domain ND448_06840 PF12833 Helix-turn-helix domain ND448_06845 PF02562 PhoH-like protein ND448_06850 PF01699 Sodium/calcium exchanger protein ND448_06855 PF08021 Siderophore-interacting FAD-binding domain ND448_06855 PF04954 Siderophore-interacting protein ND448_06860 PF00672 HAMP domain ND448_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_06860 PF07730 Histidine kinase ND448_06860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND448_06870 PF02322 Cytochrome bd terminal oxidase subunit II ND448_06875 PF01654 Cytochrome bd terminal oxidase subunit I ND448_06880 PF00392 Bacterial regulatory proteins, gntR family ND448_06880 PF00155 Aminotransferase class I and II ND448_06885 PF00202 Aminotransferase class-III ND448_06890 PF04958 Arginine N-succinyltransferase beta subunit ND448_06895 PF00171 Aldehyde dehydrogenase family ND448_06900 PF04996 Succinylarginine dihydrolase ND448_06910 PF00267 Gram-negative porin ND448_06920 PF01979 Amidohydrolase family ND448_06925 PF07702 UTRA domain ND448_06925 PF00392 Bacterial regulatory proteins, gntR family ND448_06930 PF01979 Amidohydrolase family ND448_06935 PF05962 HutD ND448_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_06940 PF03466 LysR substrate binding domain ND448_06950 PF03824 High-affinity nickel-transport protein ND448_06955 PF07503 HypF finger ND448_06955 PF01300 Telomere recombination ND448_06955 PF17788 HypF Kae1-like domain ND448_06955 PF00708 Acylphosphatase ND448_06960 PF01568 Molydopterin dinucleotide binding domain ND448_06960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND448_06960 PF00384 Molybdopterin oxidoreductase ND448_06965 PF13247 4Fe-4S dicluster domain ND448_06965 PF12800 4Fe-4S binding domain ND448_06970 PF01750 Hydrogenase maturation protease ND448_06975 PF07450 Formate hydrogenlyase maturation protein HycH ND448_06980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND448_06985 PF12838 4Fe-4S dicluster domain ND448_06990 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND448_06990 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND448_06990 PF00374 Nickel-dependent hydrogenase ND448_06995 PF00146 NADH dehydrogenase ND448_07000 PF00361 Proton-conducting membrane transporter ND448_07005 PF13247 4Fe-4S dicluster domain ND448_07010 PF11046 Transcriptional repressor of hyc and hyp operons ND448_07015 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND448_07020 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND448_07025 PF01455 HupF/HypC family ND448_07030 PF01924 Hydrogenase formation hypA family ND448_07035 PF00586 AIR synthase related protein, N-terminal domain ND448_07035 PF02769 AIR synthase related protein, C-terminal domain ND448_07040 PF01590 GAF domain ND448_07040 PF02954 Bacterial regulatory protein, Fis family ND448_07040 PF00158 Sigma-54 interaction domain ND448_07050 PF00577 Outer membrane usher protein ND448_07050 PF13954 PapC N-terminal domain ND448_07055 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_07055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_07070 PF12833 Helix-turn-helix domain ND448_07075 PF01926 50S ribosome-binding GTPase ND448_07075 PF06071 Protein of unknown function (DUF933) ND448_07085 PF01195 Peptidyl-tRNA hydrolase ND448_07090 PF10762 Protein of unknown function (DUF2583) ND448_07095 PF14572 Phosphoribosyl synthetase-associated domain ND448_07095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND448_07100 PF08544 GHMP kinases C terminal ND448_07100 PF00288 GHMP kinases N terminal domain ND448_07105 PF03550 Outer membrane lipoprotein LolB ND448_07110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND448_07110 PF01488 Shikimate / quinate 5-dehydrogenase ND448_07110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND448_07115 PF03462 PCRF domain ND448_07115 PF00472 RF-1 domain ND448_07120 PF13847 Methyltransferase domain ND448_07120 PF17827 PrmC N-terminal domain ND448_07125 PF04247 Invasion gene expression up-regulator, SirB ND448_07130 PF13369 Transglutaminase-like superfamily ND448_07135 PF00793 DAHP synthetase I family ND448_07140 PF00916 Sulfate permease family ND448_07140 PF01740 STAS domain ND448_07145 PF00990 Diguanylate cyclase, GGDEF domain ND448_07155 PF03009 Glycerophosphoryl diester phosphodiesterase family ND448_07165 PF00854 POT family ND448_07170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND448_07175 PF02811 PHP domain ND448_07180 PF02613 Nitrate reductase delta subunit ND448_07185 PF07273 Protein of unknown function (DUF1439) ND448_07195 PF07690 Major Facilitator Superfamily ND448_07200 PF13302 Acetyltransferase (GNAT) domain ND448_07205 PF04337 Protein of unknown function, DUF480 ND448_07210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND448_07215 PF03023 Lipid II flippase MurJ ND448_07220 PF08479 POTRA domain, ShlB-type ND448_07220 PF17287 POTRA domain ND448_07220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND448_07225 PF13332 Hemagglutinin repeat ND448_07225 PF05860 haemagglutination activity domain ND448_07235 PF00750 tRNA synthetases class I (R) ND448_07235 PF05746 DALR anticodon binding domain ND448_07235 PF03485 Arginyl tRNA synthetase N terminal domain ND448_07240 PF06185 YecM protein ND448_07245 PF03932 CutC family ND448_07250 PF08003 Protein of unknown function (DUF1698) ND448_07255 PF13649 Methyltransferase domain ND448_07260 PF01124 MAPEG family ND448_07265 PF01904 Protein of unknown function DUF72 ND448_07275 PF00152 tRNA synthetases class II (D, K and N) ND448_07275 PF01336 OB-fold nucleic acid binding domain ND448_07275 PF02938 GAD domain ND448_07280 PF00293 NUDIX domain ND448_07285 PF01709 Transcriptional regulator ND448_07290 PF02075 Crossover junction endodeoxyribonuclease RuvC ND448_07295 PF07499 RuvA, C-terminal domain ND448_07295 PF01330 RuvA N terminal domain ND448_07300 PF17864 RuvB AAA lid domain ND448_07300 PF05491 RuvB C-terminal winged helix domain ND448_07300 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND448_07305 PF00854 POT family ND448_07310 PF00950 ABC 3 transport family ND448_07315 PF00005 ABC transporter ND448_07320 PF01297 Zinc-uptake complex component A periplasmic ND448_07325 PF01551 Peptidase family M23 ND448_07325 PF08525 Opacity-associated protein A N-terminal motif ND448_07325 PF01476 LysM domain ND448_07330 PF03279 Bacterial lipid A biosynthesis acyltransferase ND448_07335 PF00224 Pyruvate kinase, barrel domain ND448_07335 PF02887 Pyruvate kinase, alpha/beta domain ND448_07340 PF01418 Helix-turn-helix domain, rpiR family ND448_07340 PF01380 SIS domain ND448_07345 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND448_07345 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND448_07350 PF01081 KDPG and KHG aldolase ND448_07355 PF00893 Small Multidrug Resistance protein ND448_07360 PF00893 Small Multidrug Resistance protein ND448_07365 PF01042 Endoribonuclease L-PSP ND448_07370 PF13307 Helicase C-terminal domain ND448_07370 PF04851 Type III restriction enzyme, res subunit ND448_07375 PF00814 Glycoprotease family ND448_07380 PF03843 Outer membrane lipoprotein Slp family ND448_07385 PF13193 AMP-binding enzyme C-terminal domain ND448_07385 PF00501 AMP-binding enzyme ND448_07390 PF00570 HRDC domain ND448_07390 PF01612 3'-5' exonuclease ND448_07395 PF03776 Septum formation topological specificity factor MinE ND448_07400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND448_07405 PF05209 Septum formation inhibitor MinC, N-terminal domain ND448_07405 PF03775 Septum formation inhibitor MinC, C-terminal domain ND448_07410 PF05166 YcgL domain ND448_07415 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND448_07420 PF03692 Putative zinc- or iron-chelating domain ND448_07435 PF02600 Disulfide bond formation protein DsbB ND448_07440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND448_07445 PF07840 FadR C-terminal domain ND448_07445 PF00392 Bacterial regulatory proteins, gntR family ND448_07450 PF04293 SpoVR like protein ND448_07455 PF01266 FAD dependent oxidoreductase ND448_07460 PF00842 Alanine racemase, C-terminal domain ND448_07460 PF01168 Alanine racemase, N-terminal domain ND448_07465 PF07690 Major Facilitator Superfamily ND448_07475 PF13426 PAS domain ND448_07475 PF00563 EAL domain ND448_07475 PF00990 Diguanylate cyclase, GGDEF domain ND448_07480 PF03466 LysR substrate binding domain ND448_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_07485 PF03306 Alpha-acetolactate decarboxylase ND448_07490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND448_07490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND448_07490 PF00205 Thiamine pyrophosphate enzyme, central domain ND448_07495 PF04285 Protein of unknown function (DUF444) ND448_07500 PF08298 PrkA AAA domain ND448_07500 PF06798 PrkA serine protein kinase C-terminal domain ND448_07510 PF06629 MltA-interacting protein MipA ND448_07515 PF00884 Sulfatase ND448_07520 PF01263 Aldose 1-epimerase ND448_07525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND448_07525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND448_07530 PF01641 SelR domain ND448_07535 PF07023 Protein of unknown function (DUF1315) ND448_07540 PF00857 Isochorismatase family ND448_07545 PF00710 Asparaginase, N-terminal ND448_07545 PF17763 Glutaminase/Asparaginase C-terminal domain ND448_07550 PF01343 Peptidase family S49 ND448_07555 PF00881 Nitroreductase family ND448_07560 PF02769 AIR synthase related protein, C-terminal domain ND448_07560 PF00586 AIR synthase related protein, N-terminal domain ND448_07565 PF01131 DNA topoisomerase ND448_07565 PF01751 Toprim domain ND448_07570 PF07383 Protein of unknown function (DUF1496) ND448_07575 PF00293 NUDIX domain ND448_07580 PF03372 Endonuclease/Exonuclease/phosphatase family ND448_07590 PF03466 LysR substrate binding domain ND448_07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_07610 PF01842 ACT domain ND448_07610 PF00551 Formyl transferase ND448_07615 PF02810 SEC-C motif ND448_07620 PF01734 Patatin-like phospholipase ND448_07625 PF00072 Response regulator receiver domain ND448_07630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND448_07630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND448_07630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND448_07635 PF00816 H-NS histone family ND448_07640 PF00265 Thymidine kinase ND448_07645 PF00465 Iron-containing alcohol dehydrogenase ND448_07645 PF00171 Aldehyde dehydrogenase family ND448_07655 PF01914 MarC family integral membrane protein ND448_07660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_07665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_07670 PF00528 Binding-protein-dependent transport system inner membrane component ND448_07675 PF00528 Binding-protein-dependent transport system inner membrane component ND448_07675 PF12911 N-terminal TM domain of oligopeptide transport permease C ND448_07680 PF00005 ABC transporter ND448_07680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_07685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_07685 PF00005 ABC transporter ND448_07690 PF04269 Protein of unknown function, DUF440 ND448_07695 PF13396 Phospholipase_D-nuclease N-terminal ND448_07695 PF13091 PLD-like domain ND448_07715 PF03795 YCII-related domain ND448_07730 PF00486 Transcriptional regulatory protein, C terminal ND448_07740 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_07740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_07745 PF13953 PapC C-terminal domain ND448_07745 PF13954 PapC N-terminal domain ND448_07745 PF00577 Outer membrane usher protein ND448_07765 PF03544 Gram-negative bacterial TonB protein C-terminal ND448_07770 PF03061 Thioesterase superfamily ND448_07775 PF04279 Intracellular septation protein A ND448_07780 PF01740 STAS domain ND448_07780 PF00916 Sulfate permease family ND448_07790 PF03692 Putative zinc- or iron-chelating domain ND448_07795 PF03922 OmpW family ND448_07805 PF00290 Tryptophan synthase alpha chain ND448_07810 PF00291 Pyridoxal-phosphate dependent enzyme ND448_07815 PF00218 Indole-3-glycerol phosphate synthase ND448_07815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND448_07820 PF02885 Glycosyl transferase family, helical bundle domain ND448_07820 PF00591 Glycosyl transferase family, a/b domain ND448_07825 PF00117 Glutamine amidotransferase class-I ND448_07830 PF04715 Anthranilate synthase component I, N terminal region ND448_07830 PF00425 chorismate binding enzyme ND448_07835 PF02811 PHP domain ND448_07840 PF01300 Telomere recombination ND448_07860 PF01479 S4 domain ND448_07860 PF00849 RNA pseudouridylate synthase ND448_07865 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND448_07870 PF00106 short chain dehydrogenase ND448_07875 PF01343 Peptidase family S49 ND448_07875 PF08496 Peptidase family S49 N-terminal ND448_07880 PF10692 Protein of unknown function (DUF2498) ND448_07885 PF08272 Topoisomerase I zinc-ribbon-like ND448_07885 PF01131 DNA topoisomerase ND448_07885 PF01751 Toprim domain ND448_07885 PF01396 Topoisomerase DNA binding C4 zinc finger ND448_07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_07890 PF03466 LysR substrate binding domain ND448_07905 PF00694 Aconitase C-terminal domain ND448_07905 PF00330 Aconitase family (aconitate hydratase) ND448_07910 PF00925 GTP cyclohydrolase II ND448_07915 PF01569 PAP2 superfamily ND448_07920 PF06305 Lipopolysaccharide assembly protein A domain ND448_07925 PF18073 Rubredoxin metal binding domain ND448_07935 PF07338 Protein of unknown function (DUF1471) ND448_07940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND448_07945 PF01253 Translation initiation factor SUI1 ND448_07950 PF05433 Glycine zipper 2TM domain ND448_07955 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND448_07960 PF13426 PAS domain ND448_07960 PF00563 EAL domain ND448_07960 PF05231 MASE1 ND448_07960 PF08447 PAS fold ND448_07960 PF08448 PAS fold ND448_07960 PF00990 Diguanylate cyclase, GGDEF domain ND448_07965 PF08206 Ribonuclease B OB domain ND448_07965 PF00773 RNB domain ND448_07965 PF00575 S1 RNA binding domain ND448_07970 PF10576 Iron-sulfur binding domain of endonuclease III ND448_07970 PF00730 HhH-GPD superfamily base excision DNA repair protein ND448_07970 PF00633 Helix-hairpin-helix motif ND448_07975 PF02508 Rnf-Nqr subunit, membrane protein ND448_07980 PF04205 FMN-binding domain ND448_07985 PF03116 NQR2, RnfD, RnfE family ND448_07990 PF12833 Helix-turn-helix domain ND448_07990 PF06445 GyrI-like small molecule binding domain ND448_07995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND448_07995 PF13237 4Fe-4S dicluster domain ND448_07995 PF13375 RnfC Barrel sandwich hybrid domain ND448_07995 PF10531 SLBB domain ND448_08000 PF04060 Putative Fe-S cluster ND448_08005 PF02508 Rnf-Nqr subunit, membrane protein ND448_08010 PF10754 Protein of unknown function (DUF2569) ND448_08015 PF01268 Formate--tetrahydrofolate ligase ND448_08020 PF09313 Domain of unknown function (DUF1971) ND448_08020 PF03848 Tellurite resistance protein TehB ND448_08025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND448_08025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND448_08030 PF13593 SBF-like CPA transporter family (DUF4137) ND448_08035 PF00962 Adenosine/AMP deaminase ND448_08040 PF06097 Bacterial protein of unknown function (DUF945) ND448_08045 PF01238 Phosphomannose isomerase type I ND448_08050 PF10415 Fumarase C C-terminus ND448_08050 PF00206 Lyase ND448_08055 PF05472 DNA replication terminus site-binding protein (Ter protein) ND448_08060 PF00480 ROK family ND448_08070 PF00654 Voltage gated chloride channel ND448_08075 PF06649 Protein of unknown function (DUF1161) ND448_08080 PF06932 Protein of unknown function (DUF1283) ND448_08085 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND448_08090 PF00106 short chain dehydrogenase ND448_08095 PF01510 N-acetylmuramoyl-L-alanine amidase ND448_08115 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND448_08115 PF01048 Phosphorylase superfamily ND448_08155 PF13419 Haloacid dehalogenase-like hydrolase ND448_08165 PF06445 GyrI-like small molecule binding domain ND448_08170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND448_08170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND448_08175 PF13545 Crp-like helix-turn-helix domain ND448_08175 PF00027 Cyclic nucleotide-binding domain ND448_08180 PF00582 Universal stress protein family ND448_08190 PF00455 DeoR C terminal sensor domain ND448_08190 PF08220 DeoR-like helix-turn-helix domain ND448_08195 PF03611 PTS system sugar-specific permease component ND448_08200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND448_08205 PF00596 Class II Aldolase and Adducin N-terminal domain ND448_08210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND448_08215 PF01261 Xylose isomerase-like TIM barrel ND448_08220 PF02233 NAD(P) transhydrogenase beta subunit ND448_08225 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND448_08225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND448_08225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND448_08230 PF07338 Protein of unknown function (DUF1471) ND448_08235 PF13520 Amino acid permease ND448_08245 PF00072 Response regulator receiver domain ND448_08245 PF00486 Transcriptional regulatory protein, C terminal ND448_08250 PF00672 HAMP domain ND448_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_08250 PF00512 His Kinase A (phospho-acceptor) domain ND448_08255 PF00080 Copper/zinc superoxide dismutase (SODC) ND448_08260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND448_08265 PF12833 Helix-turn-helix domain ND448_08270 PF01161 Phosphatidylethanolamine-binding protein ND448_08275 PF06392 Acid shock protein repeat ND448_08280 PF00089 Trypsin ND448_08285 PF00270 DEAD/DEAH box helicase ND448_08285 PF11898 Domain of unknown function (DUF3418) ND448_08285 PF04408 Helicase associated domain (HA2) ND448_08285 PF00271 Helicase conserved C-terminal domain ND448_08285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND448_08290 PF02525 Flavodoxin-like fold ND448_08295 PF07027 Protein of unknown function (DUF1318) ND448_08300 PF13617 YnbE-like lipoprotein ND448_08310 PF11739 Dicarboxylate transport ND448_08315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND448_08315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND448_08320 PF03724 META domain ND448_08325 PF03891 Domain of unknown function (DUF333) ND448_08330 PF02308 MgtC family ND448_08335 PF00893 Small Multidrug Resistance protein ND448_08340 PF10371 Domain of unknown function ND448_08340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND448_08340 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND448_08340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND448_08340 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND448_08345 PF01171 PP-loop family ND448_08350 PF01544 CorA-like Mg2+ transporter protein ND448_08355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_08360 PF00246 Zinc carboxypeptidase ND448_08365 PF13378 Enolase C-terminal domain-like ND448_08365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND448_08370 PF08534 Redoxin ND448_08375 PF18024 Helix-turn-helix domain ND448_08375 PF00158 Sigma-54 interaction domain ND448_08380 PF09722 Protein of unknown function (DUF2384) ND448_08385 PF08808 RES domain ND448_08390 PF05128 Domain of unknown function (DUF697) ND448_08395 PF04317 YcjX-like family, DUF463 ND448_08400 PF09584 Phage shock protein PspD (Phageshock_PspD) ND448_08405 PF04024 PspC domain ND448_08410 PF06667 Phage shock protein B ND448_08415 PF04012 PspA/IM30 family ND448_08420 PF02954 Bacterial regulatory protein, Fis family ND448_08420 PF00158 Sigma-54 interaction domain ND448_08430 PF02917 Pertussis toxin, subunit 1 ND448_08435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_08440 PF00528 Binding-protein-dependent transport system inner membrane component ND448_08445 PF12911 N-terminal TM domain of oligopeptide transport permease C ND448_08445 PF00528 Binding-protein-dependent transport system inner membrane component ND448_08450 PF00005 ABC transporter ND448_08450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_08455 PF00005 ABC transporter ND448_08465 PF00854 POT family ND448_08475 PF01556 DnaJ C terminal domain ND448_08475 PF00226 DnaJ domain ND448_08485 PF04893 Yip1 domain ND448_08495 PF11656 YjbD family (DUF3811) ND448_08500 PF00043 Glutathione S-transferase, C-terminal domain ND448_08500 PF02798 Glutathione S-transferase, N-terminal domain ND448_08505 PF08543 Phosphomethylpyrimidine kinase ND448_08510 PF00579 tRNA synthetases class I (W and Y) ND448_08510 PF01479 S4 domain ND448_08515 PF01243 Pyridoxamine 5'-phosphate oxidase ND448_08515 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND448_08520 PF03702 Anhydro-N-acetylmuramic acid kinase ND448_08525 PF05433 Glycine zipper 2TM domain ND448_08530 PF01047 MarR family ND448_08540 PF00248 Aldo/keto reductase family ND448_08545 PF06945 Protein of unknown function (DUF1289) ND448_08550 PF08019 Phosphoethanolamine transferase EptA/EptB ND448_08550 PF00884 Sulfatase ND448_08555 PF00440 Bacterial regulatory proteins, tetR family ND448_08555 PF16925 Tetracyclin repressor-like, C-terminal domain ND448_08560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND448_08565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND448_08570 PF00929 Exonuclease ND448_08575 PF00462 Glutaredoxin ND448_08580 PF00877 NlpC/P60 family ND448_08585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND448_08585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND448_08595 PF00356 Bacterial regulatory proteins, lacI family ND448_08600 PF03466 LysR substrate binding domain ND448_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_08605 PF07690 Major Facilitator Superfamily ND448_08615 PF00677 Lumazine binding domain ND448_08620 PF01554 MatE ND448_08640 PF00224 Pyruvate kinase, barrel domain ND448_08640 PF02887 Pyruvate kinase, alpha/beta domain ND448_08645 PF04728 Lipoprotein leucine-zipper ND448_08650 PF03734 L,D-transpeptidase catalytic domain ND448_08650 PF01476 LysM domain ND448_08650 PF17969 L,D-transpeptidase C-terminal domain ND448_08655 PF02657 Fe-S metabolism associated domain ND448_08660 PF00266 Aminotransferase class-V ND448_08665 PF01458 Uncharacterized protein family (UPF0051) ND448_08670 PF00005 ABC transporter ND448_08675 PF01458 Uncharacterized protein family (UPF0051) ND448_08680 PF01521 Iron-sulphur cluster biosynthesis ND448_08685 PF03061 Thioesterase superfamily ND448_08690 PF02913 FAD linked oxidases, C-terminal domain ND448_08690 PF01565 FAD binding domain ND448_08690 PF13183 4Fe-4S dicluster domain ND448_08695 PF01594 AI-2E family transporter ND448_08705 PF00391 PEP-utilising enzyme, mobile domain ND448_08705 PF02896 PEP-utilising enzyme, TIM barrel domain ND448_08705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND448_08710 PF03618 Kinase/pyrophosphorylase ND448_08715 PF00793 DAHP synthetase I family ND448_08720 PF10636 Hemin uptake protein hemP ND448_08725 PF00593 TonB dependent receptor ND448_08725 PF07715 TonB-dependent Receptor Plug Domain ND448_08730 PF05171 Haemin-degrading HemS.ChuX domain ND448_08735 PF01497 Periplasmic binding protein ND448_08740 PF01032 FecCD transport family ND448_08745 PF00005 ABC transporter ND448_08750 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND448_08755 PF10437 Bacterial lipoate protein ligase C-terminus ND448_08755 PF03099 Biotin/lipoate A/B protein ligase family ND448_08760 PF00877 NlpC/P60 family ND448_08770 PF00892 EamA-like transporter family ND448_08775 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND448_08780 PF01522 Polysaccharide deacetylase ND448_08785 PF01370 NAD dependent epimerase/dehydratase family ND448_08785 PF02911 Formyl transferase, C-terminal domain ND448_08785 PF00551 Formyl transferase ND448_08790 PF00535 Glycosyl transferase family 2 ND448_08795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND448_08800 PF00005 ABC transporter ND448_08805 PF01032 FecCD transport family ND448_08810 PF00145 C-5 cytosine-specific DNA methylase ND448_08810 PF13411 MerR HTH family regulatory protein ND448_08815 PF09553 Eco47II restriction endonuclease ND448_08850 PF02661 Fic/DOC family ND448_08865 PF05154 TM2 domain ND448_08870 PF00216 Bacterial DNA-binding protein ND448_08875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND448_08875 PF03484 tRNA synthetase B5 domain ND448_08875 PF01588 Putative tRNA binding domain ND448_08875 PF03147 Ferredoxin-fold anticodon binding domain ND448_08875 PF03483 B3/4 domain ND448_08880 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND448_08880 PF01409 tRNA synthetases class II core domain (F) ND448_08885 PF00453 Ribosomal protein L20 ND448_08890 PF01632 Ribosomal protein L35 ND448_08895 PF00707 Translation initiation factor IF-3, C-terminal domain ND448_08895 PF05198 Translation initiation factor IF-3, N-terminal domain ND448_08900 PF02824 TGS domain ND448_08900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND448_08900 PF03129 Anticodon binding domain ND448_08900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND448_08930 PF01914 MarC family integral membrane protein ND448_08935 PF01464 Transglycosylase SLT domain ND448_08940 PF01297 Zinc-uptake complex component A periplasmic ND448_08945 PF00005 ABC transporter ND448_08950 PF00950 ABC 3 transport family ND448_08955 PF00950 ABC 3 transport family ND448_08960 PF03881 Fructosamine kinase ND448_08965 PF14002 YniB-like protein ND448_08970 PF13419 Haloacid dehalogenase-like hydrolase ND448_08975 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND448_08980 PF00375 Sodium:dicarboxylate symporter family ND448_08985 PF01510 N-acetylmuramoyl-L-alanine amidase ND448_08990 PF09339 IclR helix-turn-helix domain ND448_08990 PF01614 Bacterial transcriptional regulator ND448_08995 PF07690 Major Facilitator Superfamily ND448_09005 PF01435 Peptidase family M48 ND448_09010 PF03572 Peptidase family S41 ND448_09010 PF17804 Tail specific protease N-terminal domain ND448_09010 PF00595 PDZ domain ND448_09010 PF11818 C-terminal domain of tail specific protease (DUF3340) ND448_09015 PF04352 ProQ/FINO family ND448_09015 PF17516 ProQ C-terminal domain ND448_09020 PF13185 GAF domain ND448_09025 PF04403 Paraquat-inducible protein A ND448_09030 PF02470 MlaD protein ND448_09035 PF00990 Diguanylate cyclase, GGDEF domain ND448_09035 PF00360 Phytochrome region ND448_09035 PF00563 EAL domain ND448_09035 PF01590 GAF domain ND448_09040 PF07351 Protein of unknown function (DUF1480) ND448_09065 PF05643 Putative bacterial lipoprotein (DUF799) ND448_09075 PF03783 Curli production assembly/transport component CsgG ND448_09080 PF10753 Toxin GhoT_OrtT ND448_09100 PF00144 Beta-lactamase ND448_09245 PF00959 Phage lysozyme ND448_09250 PF04971 Bacteriophage P21 holin S ND448_09270 PF07102 Protein of unknown function (DUF1364) ND448_09280 PF05063 MT-A70 ND448_09285 PF01555 DNA methylase ND448_09295 PF01580 FtsK/SpoIIIE family ND448_09295 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND448_09295 PF17854 FtsK alpha domain ND448_09295 PF09397 Ftsk gamma domain ND448_09335 PF01381 Helix-turn-helix ND448_09335 PF00717 Peptidase S24-like ND448_09400 PF07825 Excisionase-like protein ND448_09410 PF10709 Protein of unknown function (DUF2511) ND448_09415 PF05425 Copper resistance protein D ND448_09420 PF04234 CopC domain ND448_09425 PF00210 Ferritin-like domain ND448_09430 PF06440 DNA polymerase III, theta subunit ND448_09435 PF00561 alpha/beta hydrolase fold ND448_09445 PF00326 Prolyl oligopeptidase family ND448_09445 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND448_09450 PF13995 YebF-like protein ND448_09455 PF04266 ASCH domain ND448_09460 PF07130 YebG protein ND448_09465 PF00271 Helicase conserved C-terminal domain ND448_09465 PF00270 DEAD/DEAH box helicase ND448_09465 PF03880 DbpA RNA binding domain ND448_09470 PF02222 ATP-grasp domain ND448_09475 PF03701 Uncharacterised protein family (UPF0181) ND448_09480 PF04715 Anthranilate synthase component I, N terminal region ND448_09480 PF00425 chorismate binding enzyme ND448_09485 PF00293 NUDIX domain ND448_09490 PF03313 Serine dehydratase alpha chain ND448_09490 PF03315 Serine dehydratase beta chain ND448_09495 PF03471 Transporter associated domain ND448_09495 PF03741 Integral membrane protein TerC family ND448_09500 PF03610 PTS system fructose IIA component ND448_09500 PF03830 PTS system sorbose subfamily IIB component ND448_09505 PF03609 PTS system sorbose-specific iic component ND448_09510 PF03613 PTS system mannose/fructose/sorbose family IID component ND448_09515 PF06173 Protein of unknown function (DUF986) ND448_09520 PF02659 Putative manganese efflux pump ND448_09525 PF02441 Flavoprotein ND448_09540 PF02770 Acyl-CoA dehydrogenase, middle domain ND448_09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND448_09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND448_09550 PF00732 GMC oxidoreductase ND448_09550 PF05199 GMC oxidoreductase ND448_09555 PF00668 Condensation domain ND448_09555 PF13193 AMP-binding enzyme C-terminal domain ND448_09555 PF00501 AMP-binding enzyme ND448_09555 PF00550 Phosphopantetheine attachment site ND448_09560 PF07690 Major Facilitator Superfamily ND448_09580 PF13847 Methyltransferase domain ND448_09585 PF03717 Penicillin-binding Protein dimerisation domain ND448_09585 PF00905 Penicillin binding protein transpeptidase domain ND448_09590 PF02578 Multi-copper polyphenol oxidoreductase laccase ND448_09595 PF00313 'Cold-shock' DNA-binding domain ND448_09600 PF10736 Protein of unknown function (DUF2627) ND448_09605 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND448_09610 PF00324 Amino acid permease ND448_09625 PF13974 YebO-like protein ND448_09630 PF13998 MgrB protein ND448_09635 PF13996 YobH-like protein ND448_09640 PF10964 Protein of unknown function (DUF2766) ND448_09645 PF12833 Helix-turn-helix domain ND448_09660 PF13520 Amino acid permease ND448_09665 PF00005 ABC transporter ND448_09665 PF00664 ABC transporter transmembrane region ND448_09675 PF00990 Diguanylate cyclase, GGDEF domain ND448_09675 PF00360 Phytochrome region ND448_09675 PF00563 EAL domain ND448_09675 PF01590 GAF domain ND448_09680 PF03372 Endonuclease/Exonuclease/phosphatase family ND448_09690 PF06411 HdeA/HdeB family ND448_09695 PF01820 D-ala D-ala ligase N-terminus ND448_09695 PF07478 D-ala D-ala ligase C-terminus ND448_09710 PF08241 Methyltransferase domain ND448_09715 PF00313 'Cold-shock' DNA-binding domain ND448_09720 PF00313 'Cold-shock' DNA-binding domain ND448_09725 PF00313 'Cold-shock' DNA-binding domain ND448_09735 PF04794 YdjC-like protein ND448_09740 PF07883 Cupin domain ND448_09740 PF12833 Helix-turn-helix domain ND448_09745 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND448_09750 PF00232 Glycosyl hydrolase family 1 ND448_09755 PF02378 Phosphotransferase system, EIIC ND448_09760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND448_09765 PF00849 RNA pseudouridylate synthase ND448_09765 PF01479 S4 domain ND448_09775 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND448_09780 PF03553 Na+/H+ antiporter family ND448_09790 PF13520 Amino acid permease ND448_09805 PF00849 RNA pseudouridylate synthase ND448_09810 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND448_09815 PF13520 Amino acid permease ND448_09820 PF04960 Glutaminase ND448_09850 PF13673 Acetyltransferase (GNAT) domain ND448_09860 PF00034 Cytochrome c ND448_09860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ND448_09870 PF00528 Binding-protein-dependent transport system inner membrane component ND448_09875 PF00005 ABC transporter ND448_09885 PF02203 Tar ligand binding domain homologue ND448_09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_09885 PF00672 HAMP domain ND448_09890 PF13276 HTH-like domain ND448_09890 PF00665 Integrase core domain ND448_09890 PF13333 Integrase core domain ND448_09910 PF01066 CDP-alcohol phosphatidyltransferase ND448_09915 PF01541 GIY-YIG catalytic domain ND448_09915 PF02151 UvrB/uvrC motif ND448_09915 PF08459 UvrC Helix-hairpin-helix N-terminal ND448_09920 PF00196 Bacterial regulatory proteins, luxR family ND448_09920 PF00072 Response regulator receiver domain ND448_09925 PF10769 Protein of unknown function (DUF2594) ND448_09945 PF00324 Amino acid permease ND448_09950 PF01276 Orn/Lys/Arg decarboxylase, major domain ND448_09950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND448_09950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND448_09955 PF13520 Amino acid permease ND448_09960 PF18500 CadC C-terminal domain 1 ND448_09960 PF00486 Transcriptional regulatory protein, C terminal ND448_09965 PF00474 Sodium:solute symporter family ND448_09970 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND448_09970 PF14850 DNA-binding domain of Proline dehydrogenase ND448_09970 PF01619 Proline dehydrogenase ND448_09970 PF00171 Aldehyde dehydrogenase family ND448_09975 PF00005 ABC transporter ND448_09980 PF00528 Binding-protein-dependent transport system inner membrane component ND448_09985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_09990 PF00291 Pyridoxal-phosphate dependent enzyme ND448_09995 PF02899 Phage integrase, N-terminal SAM-like domain ND448_10000 PF04542 Sigma-70 region 2 ND448_10000 PF04539 Sigma-70 region 3 ND448_10000 PF04545 Sigma-70, region 4 ND448_10005 PF00669 Bacterial flagellin N-terminal helical region ND448_10005 PF00700 Bacterial flagellin C-terminal helical region ND448_10005 PF08884 Flagellin D3 domain ND448_10010 PF08884 Flagellin D3 domain ND448_10010 PF00700 Bacterial flagellin C-terminal helical region ND448_10010 PF00669 Bacterial flagellin N-terminal helical region ND448_10015 PF00700 Bacterial flagellin C-terminal helical region ND448_10015 PF08884 Flagellin D3 domain ND448_10015 PF00669 Bacterial flagellin N-terminal helical region ND448_10020 PF07196 Flagellin hook IN motif ND448_10020 PF07195 Flagellar hook-associated protein 2 C-terminus ND448_10020 PF02465 Flagellar hook-associated protein 2 N-terminus ND448_10025 PF02561 Flagellar protein FliS ND448_10030 PF05400 Flagellar protein FliT ND448_10035 PF12833 Helix-turn-helix domain ND448_10040 PF01966 HD domain ND448_10045 PF07885 Ion channel ND448_10045 PF02254 TrkA-N domain ND448_10050 PF01223 DNA/RNA non-specific endonuclease ND448_10055 PF02049 Flagellar hook-basal body complex protein FliE ND448_10060 PF01514 Secretory protein of YscJ/FliF family ND448_10060 PF08345 Flagellar M-ring protein C-terminal ND448_10065 PF01706 FliG C-terminal domain ND448_10065 PF14841 FliG middle domain ND448_10065 PF14842 FliG N-terminal domain ND448_10070 PF02108 Flagellar assembly protein FliH ND448_10075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND448_10075 PF18269 T3SS EscN ATPase C-terminal domain ND448_10080 PF02050 Flagellar FliJ protein ND448_10085 PF02120 Flagellar hook-length control protein FliK ND448_10090 PF03748 Flagellar basal body-associated protein FliL ND448_10095 PF02154 Flagellar motor switch protein FliM ND448_10095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND448_10100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND448_10100 PF16973 Flagellar motor switch protein FliN N-terminal ND448_10105 PF04347 Flagellar biosynthesis protein, FliO ND448_10110 PF00813 FliP family ND448_10115 PF01313 Bacterial export proteins, family 3 ND448_10120 PF01311 Bacterial export proteins, family 1 ND448_10125 PF00669 Bacterial flagellin N-terminal helical region ND448_10130 PF00460 Flagella basal body rod protein ND448_10130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND448_10135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND448_10135 PF10135 Rod binding protein ND448_10140 PF02119 Flagellar P-ring protein ND448_10145 PF02107 Flagellar L-ring protein ND448_10150 PF00460 Flagella basal body rod protein ND448_10150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND448_10155 PF00460 Flagella basal body rod protein ND448_10155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND448_10160 PF07559 Flagellar basal body protein FlaE ND448_10160 PF00460 Flagella basal body rod protein ND448_10160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND448_10165 PF13861 FlgD Tudor-like domain ND448_10165 PF03963 Flagellar hook capping protein - N-terminal region ND448_10165 PF13860 FlgD Ig-like domain ND448_10170 PF00460 Flagella basal body rod protein ND448_10170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND448_10175 PF00460 Flagella basal body rod protein ND448_10180 PF13144 Chaperone for flagella basal body P-ring formation ND448_10180 PF17656 FlgA N-terminal domain ND448_10185 PF04316 Anti-sigma-28 factor, FlgM ND448_10190 PF05130 FlgN protein ND448_10195 PF06366 Flagellar protein FlhE ND448_10200 PF00771 FHIPEP family ND448_10205 PF01312 FlhB HrpN YscU SpaS Family ND448_10210 PF01483 Proprotein convertase P-domain ND448_10210 PF00082 Subtilase family ND448_10215 PF00196 Bacterial regulatory proteins, luxR family ND448_10225 PF00419 Fimbrial protein ND448_10230 PF13953 PapC C-terminal domain ND448_10230 PF00577 Outer membrane usher protein ND448_10230 PF13954 PapC N-terminal domain ND448_10235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_10235 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_10245 PF00419 Fimbrial protein ND448_10275 PF04344 Chemotaxis phosphatase, CheZ ND448_10280 PF00072 Response regulator receiver domain ND448_10285 PF00072 Response regulator receiver domain ND448_10285 PF01339 CheB methylesterase ND448_10290 PF01739 CheR methyltransferase, SAM binding domain ND448_10290 PF03705 CheR methyltransferase, all-alpha domain ND448_10295 PF00672 HAMP domain ND448_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_10295 PF02203 Tar ligand binding domain homologue ND448_10300 PF00672 HAMP domain ND448_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_10300 PF02203 Tar ligand binding domain homologue ND448_10305 PF01584 CheW-like domain ND448_10310 PF02895 Signal transducing histidine kinase, homodimeric domain ND448_10310 PF01584 CheW-like domain ND448_10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_10310 PF01627 Hpt domain ND448_10310 PF09078 CheY binding ND448_10315 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND448_10315 PF00691 OmpA family ND448_10320 PF01618 MotA/TolQ/ExbB proton channel family ND448_10325 PF05280 Flagellar transcriptional activator (FlhC) ND448_10330 PF05247 Flagellar transcriptional activator (FlhD) ND448_10335 PF00582 Universal stress protein family ND448_10340 PF02308 MgtC family ND448_10345 PF00672 HAMP domain ND448_10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_10345 PF02203 Tar ligand binding domain homologue ND448_10350 PF10781 Dextransucrase DSRB ND448_10355 PF00313 'Cold-shock' DNA-binding domain ND448_10365 PF00356 Bacterial regulatory proteins, lacI family ND448_10370 PF02929 Beta galactosidase small chain ND448_10370 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND448_10370 PF16353 Domain of unknown function(DUF4981) ND448_10370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND448_10370 PF00703 Glycosyl hydrolases family 2 ND448_10375 PF00550 Phosphopantetheine attachment site ND448_10375 PF08659 KR domain ND448_10375 PF02801 Beta-ketoacyl synthase, C-terminal domain ND448_10375 PF00698 Acyl transferase domain ND448_10375 PF16197 Ketoacyl-synthetase C-terminal extension ND448_10375 PF00107 Zinc-binding dehydrogenase ND448_10375 PF08240 Alcohol dehydrogenase GroES-like domain ND448_10375 PF00109 Beta-ketoacyl synthase, N-terminal domain ND448_10375 PF14765 Polyketide synthase dehydratase ND448_10380 PF10777 Inner membrane protein YlaC ND448_10390 PF14001 YdfZ protein ND448_10400 PF06167 Glucose-regulated metallo-peptidase M90 ND448_10410 PF13356 Arm DNA-binding domain ND448_10410 PF00589 Phage integrase family ND448_10425 PF13693 Winged helix-turn-helix DNA-binding ND448_10460 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ND448_10480 PF04335 VirB8 protein ND448_10485 PF03524 Conjugal transfer protein ND448_10490 PF03743 Bacterial conjugation TrbI-like protein ND448_10495 PF00437 Type II/IV secretion system protein ND448_10510 PF08401 Domain of unknown function (DUF1738) ND448_10510 PF18818 Metallopeptidase superfamily domain ND448_10570 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND448_10570 PF01648 4'-phosphopantetheinyl transferase superfamily ND448_10575 PF00939 Sodium:sulfate symporter transmembrane region ND448_10580 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND448_10585 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND448_10590 PF04223 Citrate lyase, alpha subunit (CitF) ND448_10595 PF03328 HpcH/HpaI aldolase/citrate lyase family ND448_10600 PF06857 Malonate decarboxylase delta subunit (MdcD) ND448_10605 PF08218 Citrate lyase ligase C-terminal domain ND448_10610 PF00989 PAS fold ND448_10610 PF17203 Single cache domain 3 ND448_10610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND448_10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_10615 PF00072 Response regulator receiver domain ND448_10615 PF12431 Transcriptional regulator ND448_10620 PF00196 Bacterial regulatory proteins, luxR family ND448_10620 PF00072 Response regulator receiver domain ND448_10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_10625 PF07730 Histidine kinase ND448_10625 PF05231 MASE1 ND448_10630 PF07690 Major Facilitator Superfamily ND448_10640 PF00528 Binding-protein-dependent transport system inner membrane component ND448_10645 PF00005 ABC transporter ND448_10645 PF08402 TOBE domain ND448_10660 PF04363 Protein of unknown function (DUF496) ND448_10665 PF04632 Fusaric acid resistance protein family ND448_10675 PF08411 Exonuclease C-terminal ND448_10675 PF00929 Exonuclease ND448_10680 PF13520 Amino acid permease ND448_10685 PF07715 TonB-dependent Receptor Plug Domain ND448_10685 PF00593 TonB dependent receptor ND448_10690 PF00005 ABC transporter ND448_10695 PF01032 FecCD transport family ND448_10705 PF00324 Amino acid permease ND448_10710 PF03466 LysR substrate binding domain ND448_10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_10720 PF03601 Conserved hypothetical protein 698 ND448_10725 PF01261 Xylose isomerase-like TIM barrel ND448_10730 PF02378 Phosphotransferase system, EIIC ND448_10730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND448_10735 PF00294 pfkB family carbohydrate kinase ND448_10740 PF00381 PTS HPr component phosphorylation site ND448_10740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND448_10745 PF00293 NUDIX domain ND448_10750 PF03264 NapC/NirT cytochrome c family, N-terminal region ND448_10755 PF00384 Molybdopterin oxidoreductase ND448_10755 PF18364 Molybdopterin oxidoreductase N-terminal domain ND448_10755 PF01568 Molydopterin dinucleotide binding domain ND448_10760 PF03692 Putative zinc- or iron-chelating domain ND448_10765 PF03222 Tryptophan/tyrosine permease family ND448_10775 PF01132 Elongation factor P (EF-P) OB domain ND448_10775 PF08207 Elongation factor P (EF-P) KOW-like domain ND448_10775 PF09285 Elongation factor P, C-terminal ND448_10780 PF03786 D-mannonate dehydratase (UxuA) ND448_10785 PF01232 Mannitol dehydrogenase Rossmann domain ND448_10785 PF08125 Mannitol dehydrogenase C-terminal domain ND448_10795 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND448_10795 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND448_10800 PF01569 PAP2 superfamily ND448_10805 PF00877 NlpC/P60 family ND448_10810 PF00563 EAL domain ND448_10810 PF12792 CSS motif domain associated with EAL ND448_10815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND448_10820 PF00528 Binding-protein-dependent transport system inner membrane component ND448_10825 PF12911 N-terminal TM domain of oligopeptide transport permease C ND448_10825 PF00528 Binding-protein-dependent transport system inner membrane component ND448_10830 PF00005 ABC transporter ND448_10830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND448_10835 PF13989 YejG-like protein ND448_10840 PF07690 Major Facilitator Superfamily ND448_10845 PF00849 RNA pseudouridylate synthase ND448_10845 PF01479 S4 domain ND448_10850 PF04851 Type III restriction enzyme, res subunit ND448_10850 PF00271 Helicase conserved C-terminal domain ND448_10855 PF01386 Ribosomal L25p family ND448_10860 PF04245 37-kD nucleoid-associated bacterial protein ND448_10865 PF07208 Protein of unknown function (DUF1414) ND448_10870 PF11893 Domain of unknown function (DUF3413) ND448_10870 PF00884 Sulfatase ND448_10885 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND448_10895 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ND448_10900 PF04865 Baseplate J-like protein ND448_10945 PF17482 Phage tail sheath C-terminal domain ND448_10945 PF04984 Phage tail sheath protein subtilisin-like domain ND448_10995 PF03354 Phage Terminase ND448_11015 PF03245 Bacteriophage Rz lysis protein ND448_11020 PF13539 D-alanyl-D-alanine carboxypeptidase ND448_11050 PF03793 PASTA domain ND448_11050 PF00069 Protein kinase domain ND448_11055 PF01555 DNA methylase ND448_11065 PF06147 Protein of unknown function (DUF968) ND448_11080 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND448_11085 PF03354 Phage Terminase ND448_11120 PF10065 Uncharacterized conserved protein (DUF2303) ND448_11165 PF06183 DinI-like family ND448_11170 PF12706 Beta-lactamase superfamily domain ND448_11175 PF00144 Beta-lactamase ND448_11180 PF13302 Acetyltransferase (GNAT) domain ND448_11195 PF00267 Gram-negative porin ND448_11200 PF07690 Major Facilitator Superfamily ND448_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_11205 PF01627 Hpt domain ND448_11205 PF16359 RcsD-ABL domain ND448_11210 PF00196 Bacterial regulatory proteins, luxR family ND448_11210 PF00072 Response regulator receiver domain ND448_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_11215 PF00512 His Kinase A (phospho-acceptor) domain ND448_11215 PF09456 RcsC Alpha-Beta-Loop (ABL) ND448_11215 PF00072 Response regulator receiver domain ND448_11220 PF00521 DNA gyrase/topoisomerase IV, subunit A ND448_11220 PF03989 DNA gyrase C-terminal domain, beta-propeller ND448_11230 PF02867 Ribonucleotide reductase, barrel domain ND448_11230 PF03477 ATP cone domain ND448_11230 PF00317 Ribonucleotide reductase, all-alpha domain ND448_11235 PF00268 Ribonucleotide reductase, small chain ND448_11240 PF00111 2Fe-2S iron-sulfur cluster binding domain ND448_11250 PF03974 Ecotin ND448_11255 PF00994 Probable molybdopterin binding domain ND448_11260 PF04138 GtrA-like protein ND448_11265 PF00535 Glycosyl transferase family 2 ND448_11275 PF03222 Tryptophan/tyrosine permease family ND448_11280 PF07437 YfaZ precursor ND448_11285 PF00199 Catalase ND448_11285 PF06628 Catalase-related immune-responsive ND448_11290 PF00501 AMP-binding enzyme ND448_11290 PF13193 AMP-binding enzyme C-terminal domain ND448_11295 PF13378 Enolase C-terminal domain-like ND448_11300 PF00378 Enoyl-CoA hydratase/isomerase ND448_11305 PF12697 Alpha/beta hydrolase family ND448_11310 PF16582 Middle domain of thiamine pyrophosphate ND448_11310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND448_11310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND448_11315 PF00425 chorismate binding enzyme ND448_11320 PF05957 Bacterial protein of unknown function (DUF883) ND448_11325 PF06496 Protein of unknown function (DUF1097) ND448_11330 PF00361 Proton-conducting membrane transporter ND448_11335 PF00361 Proton-conducting membrane transporter ND448_11340 PF00361 Proton-conducting membrane transporter ND448_11340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND448_11345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND448_11350 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND448_11355 PF12838 4Fe-4S dicluster domain ND448_11360 PF00146 NADH dehydrogenase ND448_11365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND448_11365 PF00384 Molybdopterin oxidoreductase ND448_11365 PF01568 Molydopterin dinucleotide binding domain ND448_11365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND448_11370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND448_11370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND448_11370 PF10531 SLBB domain ND448_11380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND448_11380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND448_11385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND448_11390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND448_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_11395 PF03466 LysR substrate binding domain ND448_11400 PF00155 Aminotransferase class I and II ND448_11410 PF03600 Citrate transporter ND448_11410 PF02080 TrkA-C domain ND448_11420 PF03887 YfbU domain ND448_11425 PF04217 Protein of unknown function, DUF412 ND448_11430 PF00871 Acetokinase family ND448_11435 PF01515 Phosphate acetyl/butaryl transferase ND448_11435 PF07085 DRTGG domain ND448_11440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND448_11440 PF00356 Bacterial regulatory proteins, lacI family ND448_11445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND448_11455 PF03611 PTS system sugar-specific permease component ND448_11460 PF00293 NUDIX domain ND448_11465 PF12850 Calcineurin-like phosphoesterase superfamily domain ND448_11480 PF00043 Glutathione S-transferase, C-terminal domain ND448_11480 PF02798 Glutathione S-transferase, N-terminal domain ND448_11485 PF08338 Domain of unknown function (DUF1731) ND448_11485 PF01370 NAD dependent epimerase/dehydratase family ND448_11490 PF00005 ABC transporter ND448_11495 PF00528 Binding-protein-dependent transport system inner membrane component ND448_11500 PF00528 Binding-protein-dependent transport system inner membrane component ND448_11505 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_11515 PF02441 Flavoprotein ND448_11520 PF00156 Phosphoribosyl transferase domain ND448_11525 PF02674 Colicin V production protein ND448_11530 PF05036 Sporulation related domain ND448_11535 PF02875 Mur ligase family, glutamate ligase domain ND448_11535 PF08245 Mur ligase middle domain ND448_11540 PF17848 Acetyl-coA carboxylase zinc finger domain ND448_11540 PF01039 Carboxyl transferase domain ND448_11545 PF09335 SNARE associated Golgi protein ND448_11550 PF01416 tRNA pseudouridine synthase ND448_11555 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND448_11555 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND448_11560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND448_11560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND448_11560 PF11890 Domain of unknown function (DUF3410) ND448_11580 PF00155 Aminotransferase class I and II ND448_11585 PF00578 AhpC/TSA family ND448_11615 PF02801 Beta-ketoacyl synthase, C-terminal domain ND448_11615 PF00109 Beta-ketoacyl synthase, N-terminal domain ND448_11620 PF01266 FAD dependent oxidoreductase ND448_11620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND448_11625 PF08891 YfcL protein ND448_11630 PF04315 Elongation factor P hydroxylase ND448_11635 PF01925 Sulfite exporter TauE/SafE ND448_11640 PF03411 Penicillin-insensitive murein endopeptidase ND448_11645 PF01264 Chorismate synthase ND448_11650 PF05175 Methyltransferase small domain ND448_11655 PF01713 Smr domain ND448_11660 PF00300 Histidine phosphatase superfamily (branch 1) ND448_11665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND448_11665 PF00378 Enoyl-CoA hydratase/isomerase ND448_11665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND448_11670 PF00108 Thiolase, N-terminal domain ND448_11670 PF02803 Thiolase, C-terminal domain ND448_11675 PF04175 Protein of unknown function (DUF406) ND448_11680 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND448_11685 PF04333 MlaA lipoprotein ND448_11690 PF03918 Cytochrome C biogenesis protein ND448_11695 PF03918 Cytochrome C biogenesis protein ND448_11700 PF08534 Redoxin ND448_11705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND448_11705 PF01578 Cytochrome C assembly protein ND448_11710 PF03100 CcmE ND448_11715 PF04995 Heme exporter protein D (CcmD) ND448_11720 PF01578 Cytochrome C assembly protein ND448_11725 PF03379 CcmB protein ND448_11730 PF00005 ABC transporter ND448_11740 PF13356 Arm DNA-binding domain ND448_11740 PF14659 Phage integrase, N-terminal SAM-like domain ND448_11740 PF00589 Phage integrase family ND448_11745 PF08676 MutL C terminal dimerisation domain ND448_11745 PF01119 DNA mismatch repair protein, C-terminal domain ND448_11800 PF03831 PhnA domain ND448_11800 PF08274 PhnA Zinc-Ribbon ND448_11805 PF13406 Transglycosylase SLT domain ND448_11820 PF01292 Prokaryotic cytochrome b561 ND448_11825 PF00155 Aminotransferase class I and II ND448_11830 PF07350 Protein of unknown function (DUF1479) ND448_11835 PF06580 Histidine kinase ND448_11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_11835 PF07694 5TMR of 5TMR-LYT ND448_11840 PF00072 Response regulator receiver domain ND448_11840 PF04397 LytTr DNA-binding domain ND448_11845 PF07690 Major Facilitator Superfamily ND448_11850 PF02685 Glucokinase ND448_11860 PF03466 LysR substrate binding domain ND448_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_11870 PF01566 Natural resistance-associated macrophage protein ND448_11875 PF07670 Nucleoside recognition ND448_11875 PF01773 Na+ dependent nucleoside transporter N-terminus ND448_11875 PF07662 Na+ dependent nucleoside transporter C-terminus ND448_11910 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND448_11935 PF12843 Putative quorum-sensing-regulated virulence factor ND448_11940 PF01653 NAD-dependent DNA ligase adenylation domain ND448_11940 PF03120 NAD-dependent DNA ligase OB-fold domain ND448_11940 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND448_11940 PF12826 Helix-hairpin-helix motif ND448_11940 PF00533 BRCA1 C Terminus (BRCT) domain ND448_11945 PF04354 ZipA, C-terminal FtsZ-binding domain ND448_11955 PF00291 Pyridoxal-phosphate dependent enzyme ND448_11960 PF00381 PTS HPr component phosphorylation site ND448_11965 PF05524 PEP-utilising enzyme, N-terminal ND448_11965 PF00391 PEP-utilising enzyme, mobile domain ND448_11965 PF02896 PEP-utilising enzyme, TIM barrel domain ND448_11970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND448_11975 PF00291 Pyridoxal-phosphate dependent enzyme ND448_11980 PF00005 ABC transporter ND448_11985 PF00528 Binding-protein-dependent transport system inner membrane component ND448_11990 PF00528 Binding-protein-dependent transport system inner membrane component ND448_12000 PF07690 Major Facilitator Superfamily ND448_12005 PF01418 Helix-turn-helix domain, rpiR family ND448_12005 PF01380 SIS domain ND448_12010 PF04074 YhcH/YjgK/YiaL ND448_12015 PF00480 ROK family ND448_12020 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND448_12025 PF00701 Dihydrodipicolinate synthetase family ND448_12030 PF04261 Dyp-type peroxidase family ND448_12035 PF06572 Protein of unknown function (DUF1131) ND448_12040 PF04076 Bacterial OB fold (BOF) protein ND448_12090 PF00583 Acetyltransferase (GNAT) family ND448_12095 PF01218 Coproporphyrinogen III oxidase ND448_12100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND448_12105 PF00390 Malic enzyme, N-terminal domain ND448_12105 PF03949 Malic enzyme, NAD binding domain ND448_12105 PF01515 Phosphate acetyl/butaryl transferase ND448_12110 PF00293 NUDIX domain ND448_12115 PF03264 NapC/NirT cytochrome c family, N-terminal region ND448_12120 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND448_12125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND448_12125 PF01568 Molydopterin dinucleotide binding domain ND448_12125 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND448_12125 PF00384 Molybdopterin oxidoreductase ND448_12130 PF03927 NapD protein ND448_12135 PF13187 4Fe-4S dicluster domain ND448_12135 PF00037 4Fe-4S binding domain ND448_12135 PF12800 4Fe-4S binding domain ND448_12140 PF00196 Bacterial regulatory proteins, luxR family ND448_12140 PF00072 Response regulator receiver domain ND448_12150 PF00873 AcrB/AcrD/AcrF family ND448_12160 PF01817 Chorismate mutase type II ND448_12165 PF03960 ArsC family ND448_12170 PF07687 Peptidase dimerisation domain ND448_12170 PF01546 Peptidase family M20/M25/M40 ND448_12175 PF02557 D-alanyl-D-alanine carboxypeptidase ND448_12180 PF13980 Uncharacterised protein family (UPF0370) ND448_12185 PF02230 Phospholipase/Carboxylesterase ND448_12190 PF08351 Domain of unknown function (DUF1726) ND448_12190 PF13718 GNAT acetyltransferase 2 ND448_12190 PF17176 tRNA-binding domain ND448_12190 PF05127 Helicase ND448_12195 PF04284 Protein of unknown function (DUF441) ND448_12200 PF01259 SAICAR synthetase ND448_12205 PF06804 NlpB/DapX lipoprotein ND448_12210 PF00701 Dihydrodipicolinate synthetase family ND448_12215 PF01842 ACT domain ND448_12220 PF00578 AhpC/TSA family ND448_12225 PF01594 AI-2E family transporter ND448_12230 PF01435 Peptidase family M48 ND448_12230 PF07720 Tetratricopeptide repeat ND448_12235 PF03960 ArsC family ND448_12240 PF00308 Bacterial dnaA protein ND448_12245 PF00860 Permease family ND448_12255 PF02769 AIR synthase related protein, C-terminal domain ND448_12255 PF00586 AIR synthase related protein, N-terminal domain ND448_12260 PF00551 Formyl transferase ND448_12265 PF13302 Acetyltransferase (GNAT) domain ND448_12270 PF00005 ABC transporter ND448_12275 PF00528 Binding-protein-dependent transport system inner membrane component ND448_12280 PF00528 Binding-protein-dependent transport system inner membrane component ND448_12285 PF02503 Polyphosphate kinase middle domain ND448_12285 PF13090 Polyphosphate kinase C-terminal domain 2 ND448_12285 PF17941 Polyphosphate kinase C-terminal domain 1 ND448_12285 PF13089 Polyphosphate kinase N-terminal domain ND448_12290 PF02541 Ppx/GppA phosphatase family ND448_12300 PF01769 Divalent cation transporter ND448_12300 PF00571 CBS domain ND448_12300 PF03448 MgtE intracellular N domain ND448_12305 PF00012 Hsp70 protein ND448_12315 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_12315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_12320 PF13954 PapC N-terminal domain ND448_12320 PF13953 PapC C-terminal domain ND448_12320 PF00577 Outer membrane usher protein ND448_12335 PF13533 Biotin-lipoyl like ND448_12340 PF00873 AcrB/AcrD/AcrF family ND448_12345 PF00873 AcrB/AcrD/AcrF family ND448_12350 PF07690 Major Facilitator Superfamily ND448_12355 PF00672 HAMP domain ND448_12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_12355 PF00512 His Kinase A (phospho-acceptor) domain ND448_12360 PF00072 Response regulator receiver domain ND448_12360 PF00486 Transcriptional regulatory protein, C terminal ND448_12365 PF07411 Domain of unknown function (DUF1508) ND448_12370 PF16325 Peptidase family U32 C-terminal domain ND448_12370 PF01136 Peptidase family U32 ND448_12375 PF00781 Diacylglycerol kinase catalytic domain ND448_12390 PF08543 Phosphomethylpyrimidine kinase ND448_12405 PF00117 Glutamine amidotransferase class-I ND448_12405 PF00958 GMP synthase C terminal domain ND448_12405 PF02540 NAD synthase ND448_12410 PF00478 IMP dehydrogenase / GMP reductase domain ND448_12410 PF00571 CBS domain ND448_12415 PF13742 OB-fold nucleic acid binding domain ND448_12415 PF02601 Exonuclease VII, large subunit ND448_12420 PF07191 zinc-ribbons ND448_12425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND448_12425 PF01926 50S ribosome-binding GTPase ND448_12430 PF13360 PQQ-like domain ND448_12435 PF09976 Tetratricopeptide repeat-like domain ND448_12440 PF13393 Histidyl-tRNA synthetase ND448_12440 PF03129 Anticodon binding domain ND448_12445 PF04551 GcpE protein ND448_12450 PF13464 Domain of unknown function (DUF4115) ND448_12460 PF04055 Radical SAM superfamily ND448_12465 PF00334 Nucleoside diphosphate kinase ND448_12475 PF06832 Penicillin-Binding Protein C-terminus Family ND448_12475 PF00912 Transglycosylase ND448_12475 PF00905 Penicillin binding protein transpeptidase domain ND448_12480 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND448_12480 PF00207 Alpha-2-macroglobulin family ND448_12480 PF07703 Alpha-2-macroglobulin bait region domain ND448_12480 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND448_12480 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND448_12480 PF01835 MG2 domain ND448_12480 PF17962 Bacterial macroglobulin domain 6 ND448_12480 PF07678 A-macroglobulin TED domain ND448_12480 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND448_12485 PF07179 SseB protein N-terminal domain ND448_12485 PF14581 SseB protein C-terminal domain ND448_12490 PF12404 Peptidase ND448_12490 PF00883 Cytosol aminopeptidase family, catalytic domain ND448_12495 PF04384 Iron-sulphur cluster assembly ND448_12500 PF00111 2Fe-2S iron-sulfur cluster binding domain ND448_12505 PF00012 Hsp70 protein ND448_12510 PF07743 HSCB C-terminal oligomerisation domain ND448_12510 PF00226 DnaJ domain ND448_12515 PF01521 Iron-sulphur cluster biosynthesis ND448_12520 PF01592 NifU-like N terminal domain ND448_12525 PF00266 Aminotransferase class-V ND448_12530 PF02082 Transcriptional regulator ND448_12535 PF00588 SpoU rRNA Methylase family ND448_12540 PF00459 Inositol monophosphatase family ND448_12545 PF03824 High-affinity nickel-transport protein ND448_12550 PF06226 Protein of unknown function (DUF1007) ND448_12555 PF00874 PRD domain ND448_12560 PF12832 MFS_1 like family ND448_12565 PF00464 Serine hydroxymethyltransferase ND448_12570 PF00175 Oxidoreductase NAD-binding domain ND448_12570 PF00042 Globin ND448_12570 PF00970 Oxidoreductase FAD-binding domain ND448_12575 PF14502 Helix-turn-helix domain ND448_12575 PF14503 YhfZ C-terminal domain ND448_12585 PF01168 Alanine racemase, N-terminal domain ND448_12590 PF02126 Phosphotriesterase family ND448_12595 PF10941 Protein of unknown function DUF2620 ND448_12600 PF10797 Protein of unknown function ND448_12605 PF00543 Nitrogen regulatory protein P-II ND448_12610 PF00795 Carbon-nitrogen hydrolase ND448_12610 PF02540 NAD synthase ND448_12615 PF00158 Sigma-54 interaction domain ND448_12615 PF00072 Response regulator receiver domain ND448_12620 PF13942 YfhG lipoprotein ND448_12625 PF00512 His Kinase A (phospho-acceptor) domain ND448_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_12635 PF02769 AIR synthase related protein, C-terminal domain ND448_12635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND448_12635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND448_12640 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_12640 PF01464 Transglycosylase SLT domain ND448_12645 PF14437 MafB19-like deaminase ND448_12655 PF00367 phosphotransferase system, EIIB ND448_12655 PF02378 Phosphotransferase system, EIIC ND448_12660 PF01380 SIS domain ND448_12665 PF01380 SIS domain ND448_12665 PF01418 Helix-turn-helix domain, rpiR family ND448_12670 PF12838 4Fe-4S dicluster domain ND448_12675 PF01648 4'-phosphopantetheinyl transferase superfamily ND448_12680 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND448_12685 PF02565 Recombination protein O C terminal ND448_12685 PF11967 Recombination protein O N terminal ND448_12690 PF07650 KH domain ND448_12690 PF01926 50S ribosome-binding GTPase ND448_12695 PF00035 Double-stranded RNA binding motif ND448_12695 PF14622 Ribonuclease-III-like ND448_12700 PF10502 Signal peptidase, peptidase S26 ND448_12705 PF06421 GTP-binding protein LepA C-terminus ND448_12705 PF00679 Elongation factor G C-terminus ND448_12705 PF00009 Elongation factor Tu GTP binding domain ND448_12705 PF03144 Elongation factor Tu domain 2 ND448_12715 PF03888 MucB/RseB N-terminal domain ND448_12715 PF17188 MucB/RseB C-terminal domain ND448_12720 PF03873 Anti sigma-E protein RseA, C-terminal domain ND448_12720 PF03872 Anti sigma-E protein RseA, N-terminal domain ND448_12725 PF04542 Sigma-70 region 2 ND448_12725 PF08281 Sigma-70, region 4 ND448_12730 PF00890 FAD binding domain ND448_12730 PF02910 Fumarate reductase flavoprotein C-term ND448_12735 PF05175 Methyltransferase small domain ND448_12740 PF00270 DEAD/DEAH box helicase ND448_12740 PF00271 Helicase conserved C-terminal domain ND448_12745 PF12796 Ankyrin repeats (3 copies) ND448_12755 PF01228 Glycine radical ND448_12760 PF03167 Uracil DNA glycosylase superfamily ND448_12765 PF01025 GrpE ND448_12770 PF01513 ATP-NAD kinase ND448_12775 PF02463 RecF/RecN/SMC N terminal domain ND448_12780 PF04355 SmpA / OmlA family ND448_12785 PF03658 RnfH family Ubiquitin ND448_12790 PF03364 Polyketide cyclase / dehydrase and lipid transport ND448_12795 PF01668 SmpB protein ND448_12805 PF00589 Phage integrase family ND448_12805 PF13356 Arm DNA-binding domain ND448_12835 PF01926 50S ribosome-binding GTPase ND448_12840 PF13280 WYL domain ND448_12840 PF08220 DeoR-like helix-turn-helix domain ND448_12865 PF06067 Domain of unknown function (DUF932) ND448_12870 PF03230 Antirestriction protein ND448_12875 PF04002 RadC-like JAB domain ND448_12880 PF06174 Protein of unknown function (DUF987) ND448_12885 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND448_12890 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND448_12930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_12930 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_12935 PF13954 PapC N-terminal domain ND448_12935 PF00577 Outer membrane usher protein ND448_12935 PF13953 PapC C-terminal domain ND448_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_12960 PF03466 LysR substrate binding domain ND448_12975 PF01527 Transposase ND448_12985 PF18413 Neuraminidase-like domain ND448_12985 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND448_12985 PF18413 Neuraminidase-like domain ND448_12985 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND448_12995 PF03534 Salmonella virulence plasmid 65kDa B protein ND448_12995 PF12255 Insecticide toxin TcdB middle/C-terminal region ND448_12995 PF12256 Insecticide toxin TcdB middle/N-terminal region ND448_13000 PF18807 Tripartite Tc toxins repeat ND448_13000 PF14431 YwqJ-like deaminase ND448_13030 PF00571 CBS domain ND448_13030 PF01380 SIS domain ND448_13035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND448_13035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND448_13045 PF02653 Branched-chain amino acid transport system / permease component ND448_13050 PF00005 ABC transporter ND448_13060 PF00561 alpha/beta hydrolase fold ND448_13065 PF03466 LysR substrate binding domain ND448_13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_13070 PF02652 L-lactate permease ND448_13075 PF01070 FMN-dependent dehydrogenase ND448_13080 PF06039 Malate:quinone oxidoreductase (Mqo) ND448_13085 PF00313 'Cold-shock' DNA-binding domain ND448_13095 PF06711 Protein of unknown function (DUF1198) ND448_13100 PF09400 Protein of unknown function (DUF2002) ND448_13115 PF07972 NrdI Flavodoxin like ND448_13120 PF02867 Ribonucleotide reductase, barrel domain ND448_13120 PF00317 Ribonucleotide reductase, all-alpha domain ND448_13120 PF08343 Ribonucleotide reductase N-terminal ND448_13125 PF00268 Ribonucleotide reductase, small chain ND448_13130 PF00005 ABC transporter ND448_13130 PF00571 CBS domain ND448_13135 PF00528 Binding-protein-dependent transport system inner membrane component ND448_13140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND448_13150 PF07690 Major Facilitator Superfamily ND448_13155 PF01047 MarR family ND448_13165 PF00529 HlyD membrane-fusion protein of T1SS ND448_13165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND448_13170 PF07690 Major Facilitator Superfamily ND448_13175 PF00588 SpoU rRNA Methylase family ND448_13175 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND448_13180 PF00085 Thioredoxin ND448_13185 PF03942 DTW domain ND448_13190 PF00583 Acetyltransferase (GNAT) family ND448_13190 PF13380 CoA binding domain ND448_13190 PF13607 Succinyl-CoA ligase like flavodoxin domain ND448_13195 PF13091 PLD-like domain ND448_13200 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND448_13230 PF00005 ABC transporter ND448_13230 PF09383 NIL domain ND448_13235 PF00528 Binding-protein-dependent transport system inner membrane component ND448_13240 PF03180 NLPA lipoprotein ND448_13245 PF16358 RcsF lipoprotein ND448_13250 PF01980 tRNA-methyltransferase O ND448_13250 PF18389 TrmO C-terminal domain ND448_13255 PF03129 Anticodon binding domain ND448_13255 PF04073 Aminoacyl-tRNA editing domain ND448_13255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND448_13260 PF04170 NlpE N-terminal domain ND448_13260 PF17185 NlpE C-terminal OB domain ND448_13265 PF00472 RF-1 domain ND448_13270 PF07152 YaeQ protein ND448_13275 PF06786 Uncharacterised protein family (UPF0253) ND448_13280 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND448_13285 PF00034 Cytochrome c ND448_13290 PF11734 TilS substrate C-terminal domain ND448_13290 PF09179 TilS substrate binding domain ND448_13290 PF01171 PP-loop family ND448_13295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND448_13310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND448_13315 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND448_13315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND448_13315 PF14579 Helix-hairpin-helix motif ND448_13315 PF02811 PHP domain ND448_13315 PF01336 OB-fold nucleic acid binding domain ND448_13320 PF01351 Ribonuclease HII ND448_13325 PF02684 Lipid-A-disaccharide synthetase ND448_13330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND448_13330 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_13335 PF07977 FabA-like domain ND448_13340 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_13340 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND448_13345 PF03938 Outer membrane protein (OmpH-like) ND448_13350 PF07244 Surface antigen variable number repeat ND448_13350 PF01103 Surface antigen ND448_13355 PF17820 PDZ domain ND448_13355 PF02163 Peptidase family M50 ND448_13365 PF01255 Putative undecaprenyl diphosphate synthase ND448_13370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND448_13370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND448_13370 PF13288 DXP reductoisomerase C-terminal domain ND448_13375 PF01765 Ribosome recycling factor ND448_13380 PF00696 Amino acid kinase family ND448_13385 PF00889 Elongation factor TS ND448_13390 PF00318 Ribosomal protein S2 ND448_13395 PF00557 Metallopeptidase family M24 ND448_13400 PF01842 ACT domain ND448_13400 PF08335 GlnD PII-uridylyltransferase ND448_13400 PF01966 HD domain ND448_13400 PF01909 Nucleotidyltransferase domain ND448_13405 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_13405 PF14602 Hexapeptide repeat of succinyl-transferase ND448_13405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND448_13410 PF11944 Protein of unknown function (DUF3461) ND448_13415 PF00258 Flavodoxin ND448_13420 PF00849 RNA pseudouridylate synthase ND448_13425 PF04287 tRNA pseudouridine synthase C ND448_13430 PF07348 Syd protein (SUKH-2) ND448_13435 PF14489 QueF-like protein ND448_13435 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND448_13440 PF11892 Domain of unknown function (DUF3412) ND448_13440 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND448_13440 PF03641 Possible lysine decarboxylase ND448_13445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND448_13445 PF01367 5'-3' exonuclease, C-terminal SAM fold ND448_13450 PF18125 RlmM ferredoxin-like domain ND448_13450 PF01728 FtsJ-like methyltransferase ND448_13455 PF04241 Protein of unknown function (DUF423) ND448_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_13460 PF03466 LysR substrate binding domain ND448_13465 PF06004 Bacterial protein of unknown function (DUF903) ND448_13470 PF00266 Aminotransferase class-V ND448_13475 PF02657 Fe-S metabolism associated domain ND448_13480 PF00899 ThiF family ND448_13485 PF06725 3D domain ND448_13485 PF03562 MltA specific insert domain ND448_13505 PF01520 N-acetylmuramoyl-L-alanine amidase ND448_13505 PF11741 AMIN domain ND448_13510 PF00696 Amino acid kinase family ND448_13510 PF00583 Acetyltransferase (GNAT) family ND448_13515 PF13538 UvrD-like helicase C-terminal domain ND448_13520 PF00580 UvrD/REP helicase N-terminal domain ND448_13520 PF13361 UvrD-like helicase C-terminal domain ND448_13520 PF12705 PD-(D/E)XK nuclease superfamily ND448_13525 PF00675 Insulinase (Peptidase family M16) ND448_13525 PF05193 Peptidase M16 inactive domain ND448_13525 PF16187 Middle or third domain of peptidase_M16 ND448_13530 PF17946 RecC C-terminal domain ND448_13535 PF07963 Prokaryotic N-terminal methylation motif ND448_13535 PF12528 Type II secretion prepilin peptidase dependent protein C ND448_13550 PF07963 Prokaryotic N-terminal methylation motif ND448_13550 PF00114 Pilin (bacterial filament) ND448_13555 PF00303 Thymidylate synthase ND448_13560 PF01790 Prolipoprotein diacylglyceryl transferase ND448_13565 PF01590 GAF domain ND448_13565 PF05524 PEP-utilising enzyme, N-terminal ND448_13565 PF02896 PEP-utilising enzyme, TIM barrel domain ND448_13565 PF00391 PEP-utilising enzyme, mobile domain ND448_13570 PF00293 NUDIX domain ND448_13575 PF02976 DNA mismatch repair enzyme MutH ND448_13580 PF03741 Integral membrane protein TerC family ND448_13585 PF00248 Aldo/keto reductase family ND448_13590 PF07690 Major Facilitator Superfamily ND448_13595 PF01553 Acyltransferase ND448_13595 PF00501 AMP-binding enzyme ND448_13595 PF13193 AMP-binding enzyme C-terminal domain ND448_13600 PF00356 Bacterial regulatory proteins, lacI family ND448_13605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND448_13605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND448_13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_13610 PF03466 LysR substrate binding domain ND448_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_13615 PF03466 LysR substrate binding domain ND448_13655 PF07963 Prokaryotic N-terminal methylation motif ND448_13655 PF11612 Type II secretion system (T2SS), protein J ND448_13660 PF07963 Prokaryotic N-terminal methylation motif ND448_13660 PF02501 Type II secretion system (T2SS), protein I ND448_13670 PF07963 Prokaryotic N-terminal methylation motif ND448_13670 PF08334 Type II secretion system (T2SS), protein G ND448_13675 PF00482 Type II secretion system (T2SS), protein F ND448_13680 PF00437 Type II/IV secretion system protein ND448_13685 PF00263 Bacterial type II and III secretion system protein ND448_13685 PF03958 Bacterial type II/III secretion system short domain ND448_13710 PF00005 ABC transporter ND448_13715 PF02405 Permease MlaE ND448_13725 PF00152 tRNA synthetases class II (D, K and N) ND448_13725 PF01336 OB-fold nucleic acid binding domain ND448_13735 PF01368 DHH family ND448_13735 PF02272 DHHA1 domain ND448_13735 PF17768 RecJ OB domain ND448_13740 PF10411 Disulfide bond isomerase protein N-terminus ND448_13740 PF13098 Thioredoxin-like domain ND448_13745 PF02899 Phage integrase, N-terminal SAM-like domain ND448_13745 PF00589 Phage integrase family ND448_13750 PF00258 Flavodoxin ND448_13755 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND448_13760 PF03937 Flavinator of succinate dehydrogenase ND448_13765 PF01571 Aminomethyltransferase folate-binding domain ND448_13770 PF03006 Haemolysin-III related ND448_13780 PF02347 Glycine cleavage system P-protein ND448_13785 PF01597 Glycine cleavage H-protein ND448_13790 PF01571 Aminomethyltransferase folate-binding domain ND448_13790 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND448_13795 PF01494 FAD binding domain ND448_13800 PF01494 FAD binding domain ND448_13805 PF05195 Aminopeptidase P, N-terminal domain ND448_13805 PF00557 Metallopeptidase family M24 ND448_13810 PF03695 Uncharacterised protein family (UPF0149) ND448_13815 PF05164 Cell division protein ZapA ND448_13825 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND448_13830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND448_13830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND448_13830 PF01842 ACT domain ND448_13835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND448_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_13840 PF03466 LysR substrate binding domain ND448_13845 PF04402 Protein of unknown function (DUF541) ND448_13850 PF01810 LysE type translocator ND448_13855 PF00924 Mechanosensitive ion channel ND448_13855 PF05552 Conserved TM helix ND448_13860 PF01116 Fructose-bisphosphate aldolase class-II ND448_13865 PF00162 Phosphoglycerate kinase ND448_13870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND448_13870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND448_13875 PF02779 Transketolase, pyrimidine binding domain ND448_13875 PF02780 Transketolase, C-terminal domain ND448_13875 PF00456 Transketolase, thiamine diphosphate binding domain ND448_13885 PF17810 Arginine decarboxylase helical bundle domain ND448_13885 PF17944 Arginine decarboxylase C-terminal helical extension ND448_13885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND448_13890 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND448_13890 PF02772 S-adenosylmethionine synthetase, central domain ND448_13890 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND448_13900 PF04143 Sulphur transport ND448_13910 PF10263 SprT-like family ND448_13910 PF17283 SprT-like zinc ribbon domain ND448_13915 PF04231 Endonuclease I ND448_13920 PF04452 RNA methyltransferase ND448_13925 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND448_13925 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND448_13930 PF02622 Uncharacterized ACR, COG1678 ND448_13935 PF03652 Holliday junction resolvase ND448_13940 PF00795 Carbon-nitrogen hydrolase ND448_13945 PF04371 Porphyromonas-type peptidyl-arginine deiminase ND448_13950 PF00437 Type II/IV secretion system protein ND448_13955 PF01168 Alanine racemase, N-terminal domain ND448_13960 PF03807 NADP oxidoreductase coenzyme F420-dependent ND448_13960 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND448_13965 PF02325 YGGT family ND448_13970 PF02594 Uncharacterised ACR, YggU family COG1872 ND448_13975 PF01725 Ham1 family ND448_13980 PF06969 HemN C-terminal domain ND448_13980 PF04055 Radical SAM superfamily ND448_13985 PF11101 Protein of unknown function (DUF2884) ND448_13990 PF04960 Glutaminase ND448_13995 PF04320 Protein with unknown function (DUF469) ND448_14000 PF02390 Putative methyltransferase ND448_14005 PF10576 Iron-sulfur binding domain of endonuclease III ND448_14005 PF00633 Helix-hairpin-helix motif ND448_14005 PF00730 HhH-GPD superfamily base excision DNA repair protein ND448_14005 PF14815 NUDIX domain ND448_14010 PF04362 Bacterial Fe(2+) trafficking ND448_14015 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND448_14015 PF01464 Transglycosylase SLT domain ND448_14060 PF00294 pfkB family carbohydrate kinase ND448_14065 PF01228 Glycine radical ND448_14065 PF02901 Pyruvate formate lyase-like ND448_14070 PF00871 Acetokinase family ND448_14075 PF01490 Transmembrane amino acid transporter protein ND448_14080 PF00291 Pyridoxal-phosphate dependent enzyme ND448_14085 PF00501 AMP-binding enzyme ND448_14085 PF13193 AMP-binding enzyme C-terminal domain ND448_14085 PF00668 Condensation domain ND448_14085 PF00550 Phosphopantetheine attachment site ND448_14085 PF00975 Thioesterase domain ND448_14095 PF00550 Phosphopantetheine attachment site ND448_14095 PF00857 Isochorismatase family ND448_14100 PF13193 AMP-binding enzyme C-terminal domain ND448_14100 PF00501 AMP-binding enzyme ND448_14105 PF00425 chorismate binding enzyme ND448_14110 PF01497 Periplasmic binding protein ND448_14115 PF05977 Transmembrane secretion effector ND448_14120 PF01032 FecCD transport family ND448_14125 PF01032 FecCD transport family ND448_14130 PF00005 ABC transporter ND448_14140 PF00501 AMP-binding enzyme ND448_14140 PF13193 AMP-binding enzyme C-terminal domain ND448_14140 PF00668 Condensation domain ND448_14140 PF00550 Phosphopantetheine attachment site ND448_14140 PF00975 Thioesterase domain ND448_14145 PF03621 MbtH-like protein ND448_14150 PF11806 Domain of unknown function (DUF3327) ND448_14150 PF00756 Putative esterase ND448_14155 PF07715 TonB-dependent Receptor Plug Domain ND448_14155 PF00593 TonB dependent receptor ND448_14160 PF08501 Shikimate dehydrogenase substrate binding domain ND448_14185 PF04972 BON domain ND448_14185 PF00263 Bacterial type II and III secretion system protein ND448_14185 PF13629 Pilus formation protein N terminal region ND448_14205 PF00437 Type II/IV secretion system protein ND448_14245 PF02472 Biopolymer transport protein ExbD/TolR ND448_14250 PF01618 MotA/TolQ/ExbB proton channel family ND448_14255 PF01053 Cys/Met metabolism PLP-dependent enzyme ND448_14260 PF09335 SNARE associated Golgi protein ND448_14265 PF06719 AraC-type transcriptional regulator N-terminus ND448_14265 PF12833 Helix-turn-helix domain ND448_14270 PF00465 Iron-containing alcohol dehydrogenase ND448_14275 PF00248 Aldo/keto reductase family ND448_14280 PF04055 Radical SAM superfamily ND448_14280 PF08497 Radical SAM N-terminal ND448_14280 PF11842 Domain of unknown function (DUF3362) ND448_14285 PF07731 Multicopper oxidase ND448_14285 PF07732 Multicopper oxidase ND448_14290 PF01553 Acyltransferase ND448_14295 PF03989 DNA gyrase C-terminal domain, beta-propeller ND448_14295 PF00521 DNA gyrase/topoisomerase IV, subunit A ND448_14300 PF02525 Flavodoxin-like fold ND448_14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_14305 PF03466 LysR substrate binding domain ND448_14310 PF00204 DNA gyrase B ND448_14310 PF00986 DNA gyrase B subunit, carboxyl terminus ND448_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_14310 PF01751 Toprim domain ND448_14315 PF05728 Uncharacterised protein family (UPF0227) ND448_14320 PF00149 Calcineurin-like phosphoesterase ND448_14325 PF06853 Protein of unknown function (DUF1249) ND448_14330 PF00293 NUDIX domain ND448_14335 PF02321 Outer membrane efflux protein ND448_14340 PF06693 Protein of unknown function (DUF1190) ND448_14345 PF03738 Glutathionylspermidine synthase preATP-grasp ND448_14350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND448_14355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND448_14360 PF04380 Membrane fusogenic activity ND448_14370 PF01467 Cytidylyltransferase-like ND448_14370 PF00294 pfkB family carbohydrate kinase ND448_14375 PF08335 GlnD PII-uridylyltransferase ND448_14375 PF03710 Glutamate-ammonia ligase adenylyltransferase ND448_14380 PF01928 CYTH domain ND448_14385 PF08239 Bacterial SH3 domain ND448_14390 PF12627 Probable RNA and SrmB- binding site of polymerase A ND448_14390 PF01743 Poly A polymerase head domain ND448_14390 PF01966 HD domain ND448_14395 PF02673 Bacitracin resistance protein BacA ND448_14400 PF02152 Dihydroneopterin aldolase ND448_14405 PF02660 Glycerol-3-phosphate acyltransferase ND448_14410 PF00814 Glycoprotease family ND448_14415 PF01165 Ribosomal protein S21 ND448_14420 PF01807 CHC2 zinc finger ND448_14420 PF08275 DNA primase catalytic core, N-terminal domain ND448_14420 PF08278 DNA primase DnaG DnaB-binding ND448_14420 PF10410 DnaB-helicase binding domain of primase ND448_14425 PF04545 Sigma-70, region 4 ND448_14425 PF04539 Sigma-70 region 3 ND448_14425 PF00140 Sigma-70 factor, region 1.2 ND448_14425 PF04546 Sigma-70, non-essential region ND448_14425 PF04542 Sigma-70 region 2 ND448_14425 PF03979 Sigma-70 factor, region 1.1 ND448_14450 PF00106 short chain dehydrogenase ND448_14475 PF08241 Methyltransferase domain ND448_14480 PF00535 Glycosyl transferase family 2 ND448_14515 PF13018 Extended Signal Peptide of Type V secretion system ND448_14515 PF05860 haemagglutination activity domain ND448_14515 PF04829 Pre-toxin domain with VENN motif ND448_14515 PF13332 Hemagglutinin repeat ND448_14520 PF05860 haemagglutination activity domain ND448_14520 PF04829 Pre-toxin domain with VENN motif ND448_14520 PF13018 Extended Signal Peptide of Type V secretion system ND448_14520 PF13332 Hemagglutinin repeat ND448_14530 PF08479 POTRA domain, ShlB-type ND448_14530 PF17287 POTRA domain ND448_14530 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND448_14535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND448_14535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_14540 PF05175 Methyltransferase small domain ND448_14550 PF01863 Protein of unknown function DUF45 ND448_14555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND448_14560 PF03741 Integral membrane protein TerC family ND448_14565 PF00375 Sodium:dicarboxylate symporter family ND448_14570 PF10688 Bacterial inner membrane protein ND448_14575 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND448_14575 PF08666 SAF domain ND448_14580 PF01232 Mannitol dehydrogenase Rossmann domain ND448_14580 PF08125 Mannitol dehydrogenase C-terminal domain ND448_14585 PF02614 Glucuronate isomerase ND448_14590 PF07690 Major Facilitator Superfamily ND448_14595 PF00392 Bacterial regulatory proteins, gntR family ND448_14595 PF07729 FCD domain ND448_14605 PF09335 SNARE associated Golgi protein ND448_14610 PF13721 SecD export protein N-terminal TM region ND448_14620 PF05957 Bacterial protein of unknown function (DUF883) ND448_14625 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND448_14630 PF13997 YqjK-like protein ND448_14635 PF07681 DoxX ND448_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_14640 PF03466 LysR substrate binding domain ND448_14645 PF17954 Quercetinase C-terminal cupin domain ND448_14645 PF02678 Pirin ND448_14660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND448_14665 PF04348 LppC putative lipoprotein ND448_14670 PF02021 Uncharacterised protein family UPF0102 ND448_14675 PF13580 SIS domain ND448_14680 PF04972 BON domain ND448_14685 PF00912 Transglycosylase ND448_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_14695 PF00512 His Kinase A (phospho-acceptor) domain ND448_14695 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND448_14695 PF01627 Hpt domain ND448_14695 PF00989 PAS fold ND448_14695 PF00072 Response regulator receiver domain ND448_14700 PF16199 Radical_SAM C-terminal domain ND448_14700 PF04055 Radical SAM superfamily ND448_14705 PF00310 Glutamine amidotransferases class-II ND448_14705 PF04898 Glutamate synthase central domain ND448_14705 PF01645 Conserved region in glutamate synthase ND448_14705 PF01493 GXGXG motif ND448_14710 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_14710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND448_14720 PF04386 Stringent starvation protein B ND448_14725 PF00043 Glutathione S-transferase, C-terminal domain ND448_14725 PF02798 Glutathione S-transferase, N-terminal domain ND448_14730 PF00380 Ribosomal protein S9/S16 ND448_14735 PF00572 Ribosomal protein L13 ND448_14740 PF03969 AFG1-like ATPase ND448_14745 PF06295 Protein of unknown function (DUF1043) ND448_14750 PF00595 PDZ domain ND448_14750 PF13180 PDZ domain ND448_14755 PF13180 PDZ domain ND448_14760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND448_14765 PF01722 BolA-like protein ND448_14770 PF13466 STAS domain ND448_14775 PF05494 MlaC protein ND448_14780 PF02470 MlaD protein ND448_14785 PF02405 Permease MlaE ND448_14790 PF00005 ABC transporter ND448_14795 PF01699 Sodium/calcium exchanger protein ND448_14800 PF00571 CBS domain ND448_14800 PF01380 SIS domain ND448_14810 PF06835 Lipopolysaccharide-assembly, LptC-related ND448_14815 PF03968 OstA-like protein ND448_14820 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND448_14820 PF00005 ABC transporter ND448_14825 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND448_14825 PF04963 Sigma-54 factor, core binding domain ND448_14825 PF04552 Sigma-54, DNA binding domain ND448_14830 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND448_14835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND448_14840 PF03668 P-loop ATPase protein family ND448_14845 PF00381 PTS HPr component phosphorylation site ND448_14850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND448_14850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND448_14855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND448_14855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND448_14860 PF01042 Endoribonuclease L-PSP ND448_14865 PF00128 Alpha amylase, catalytic domain ND448_14865 PF11941 Domain of unknown function (DUF3459) ND448_14870 PF00367 phosphotransferase system, EIIB ND448_14870 PF02378 Phosphotransferase system, EIIC ND448_14875 PF00356 Bacterial regulatory proteins, lacI family ND448_14880 PF00689 Cation transporting ATPase, C-terminus ND448_14880 PF00690 Cation transporter/ATPase, N-terminus ND448_14890 PF01272 Transcription elongation factor, GreA/GreB, C-term ND448_14890 PF14760 Rnk N-terminus ND448_14895 PF07361 Cytochrome b562 ND448_14900 PF01523 Putative modulator of DNA gyrase ND448_14905 PF04751 Protein of unknown function (DUF615) ND448_14910 PF01337 Barstar (barnase inhibitor) ND448_14915 PF00545 ribonuclease ND448_14920 PF00171 Aldehyde dehydrogenase family ND448_14925 PF04632 Fusaric acid resistance protein family ND448_14930 PF13533 Biotin-lipoyl like ND448_14935 PF07869 Protein of unknown function (DUF1656) ND448_14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_14940 PF03466 LysR substrate binding domain ND448_14945 PF01523 Putative modulator of DNA gyrase ND448_14950 PF00795 Carbon-nitrogen hydrolase ND448_14955 PF13502 AsmA-like C-terminal region ND448_14955 PF13116 Protein of unknown function ND448_14960 PF10150 Ribonuclease E/G family ND448_14960 PF00575 S1 RNA binding domain ND448_14965 PF02545 Maf-like protein ND448_14970 PF04093 rod shape-determining protein MreD ND448_14975 PF04085 rod shape-determining protein MreC ND448_14985 PF17157 Gammaproteobacterial periplasmic sensor domain ND448_14985 PF00990 Diguanylate cyclase, GGDEF domain ND448_14985 PF00563 EAL domain ND448_14990 PF00107 Zinc-binding dehydrogenase ND448_14990 PF08240 Alcohol dehydrogenase GroES-like domain ND448_14995 PF00174 Oxidoreductase molybdopterin binding domain ND448_15000 PF01794 Ferric reductase like transmembrane component ND448_15005 PF01220 Dehydroquinase class II ND448_15010 PF00364 Biotin-requiring enzyme ND448_15015 PF02785 Biotin carboxylase C-terminal domain ND448_15015 PF00289 Biotin carboxylase, N-terminal domain ND448_15015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND448_15020 PF06196 Protein of unknown function (DUF997) ND448_15025 PF00474 Sodium:solute symporter family ND448_15035 PF01207 Dihydrouridine synthase (Dus) ND448_15040 PF02954 Bacterial regulatory protein, Fis family ND448_15050 PF03279 Bacterial lipid A biosynthesis acyltransferase ND448_15055 PF00484 Carbonic anhydrase ND448_15060 PF04172 LrgB-like family ND448_15065 PF03788 LrgA family ND448_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_15070 PF03466 LysR substrate binding domain ND448_15075 PF00999 Sodium/hydrogen exchanger family ND448_15080 PF00860 Permease family ND448_15090 PF00436 Single-strand binding protein family ND448_15095 PF00005 ABC transporter ND448_15095 PF17755 UvrA DNA-binding domain ND448_15095 PF17760 UvrA interaction domain ND448_15100 PF04237 YjbR ND448_15105 PF00155 Aminotransferase class I and II ND448_15110 PF01168 Alanine racemase, N-terminal domain ND448_15110 PF00842 Alanine racemase, C-terminal domain ND448_15115 PF00772 DnaB-like helicase N terminal domain ND448_15115 PF03796 DnaB-like helicase C terminal domain ND448_15120 PF00107 Zinc-binding dehydrogenase ND448_15120 PF08240 Alcohol dehydrogenase GroES-like domain ND448_15125 PF09583 Phage shock protein G (Phageshock_PspG) ND448_15130 PF01207 Dihydrouridine synthase (Dus) ND448_15135 PF01475 Ferric uptake regulator family ND448_15140 PF01726 LexA DNA binding domain ND448_15140 PF00717 Peptidase S24-like ND448_15145 PF01219 Prokaryotic diacylglycerol kinase ND448_15150 PF01553 Acyltransferase ND448_15155 PF01040 UbiA prenyltransferase family ND448_15160 PF04345 Chorismate lyase ND448_15165 PF07148 Maltose operon periplasmic protein precursor (MalM) ND448_15170 PF02264 LamB porin ND448_15175 PF00005 ABC transporter ND448_15175 PF17912 MalK OB fold domain ND448_15185 PF01547 Bacterial extracellular solute-binding protein ND448_15190 PF00528 Binding-protein-dependent transport system inner membrane component ND448_15190 PF14785 Maltose transport system permease protein MalF P2 domain ND448_15195 PF00528 Binding-protein-dependent transport system inner membrane component ND448_15200 PF06146 Phosphate-starvation-inducible E ND448_15205 PF00342 Phosphoglucose isomerase ND448_15210 PF01842 ACT domain ND448_15210 PF00696 Amino acid kinase family ND448_15215 PF17287 POTRA domain ND448_15215 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND448_15215 PF08479 POTRA domain, ShlB-type ND448_15220 PF13332 Hemagglutinin repeat ND448_15220 PF05860 haemagglutination activity domain ND448_15225 PF00872 Transposase, Mutator family ND448_15230 PF02369 Bacterial Ig-like domain (group 1) ND448_15230 PF11924 Inverse autotransporter, beta-domain ND448_15230 PF07979 Intimin C-type lectin domain ND448_15230 PF09134 Invasin, domain 3 ND448_15240 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND448_15250 PF00004 ATPase family associated with various cellular activities (AAA) ND448_15250 PF17862 AAA+ lid domain ND448_15250 PF01434 Peptidase family M41 ND448_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_15330 PF03466 LysR substrate binding domain ND448_15350 PF02310 B12 binding domain ND448_15350 PF02607 B12 binding domain ND448_15350 PF00809 Pterin binding enzyme ND448_15350 PF02574 Homocysteine S-methyltransferase ND448_15350 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND448_15355 PF01614 Bacterial transcriptional regulator ND448_15355 PF09339 IclR helix-turn-helix domain ND448_15360 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND448_15365 PF00463 Isocitrate lyase family ND448_15370 PF01274 Malate synthase ND448_15375 PF04204 Homoserine O-succinyltransferase ND448_15410 PF01808 AICARFT/IMPCHase bienzyme ND448_15410 PF02142 MGS-like domain ND448_15415 PF02843 Phosphoribosylglycinamide synthetase, C domain ND448_15415 PF02844 Phosphoribosylglycinamide synthetase, N domain ND448_15415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND448_15420 PF07356 Protein of unknown function (DUF1481) ND448_15425 PF00216 Bacterial DNA-binding protein ND448_15430 PF04222 Protein of unknown function (DUF416) ND448_15435 PF04493 Endonuclease V ND448_15440 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND448_15445 PF00293 NUDIX domain ND448_15445 PF09297 NADH pyrophosphatase zinc ribbon domain ND448_15450 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND448_15455 PF01964 Radical SAM ThiC family ND448_15455 PF13667 ThiC-associated domain ND448_15460 PF02581 Thiamine monophosphate synthase ND448_15465 PF00899 ThiF family ND448_15470 PF02597 ThiS family ND448_15475 PF05690 Thiazole biosynthesis protein ThiG ND448_15480 PF06968 Biotin and Thiamin Synthesis associated domain ND448_15480 PF04055 Radical SAM superfamily ND448_15485 PF04997 RNA polymerase Rpb1, domain 1 ND448_15485 PF04983 RNA polymerase Rpb1, domain 3 ND448_15485 PF00623 RNA polymerase Rpb1, domain 2 ND448_15485 PF04998 RNA polymerase Rpb1, domain 5 ND448_15485 PF05000 RNA polymerase Rpb1, domain 4 ND448_15490 PF04565 RNA polymerase Rpb2, domain 3 ND448_15490 PF10385 RNA polymerase beta subunit external 1 domain ND448_15490 PF04563 RNA polymerase beta subunit ND448_15490 PF00562 RNA polymerase Rpb2, domain 6 ND448_15490 PF04560 RNA polymerase Rpb2, domain 7 ND448_15490 PF04561 RNA polymerase Rpb2, domain 2 ND448_15495 PF00542 Ribosomal protein L7/L12 C-terminal domain ND448_15495 PF16320 Ribosomal protein L7/L12 dimerisation domain ND448_15500 PF00466 Ribosomal protein L10 ND448_15505 PF00687 Ribosomal protein L1p/L10e family ND448_15510 PF00298 Ribosomal protein L11, RNA binding domain ND448_15510 PF03946 Ribosomal protein L11, N-terminal domain ND448_15515 PF00467 KOW motif ND448_15515 PF02357 Transcription termination factor nusG ND448_15520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND448_15525 PF00009 Elongation factor Tu GTP binding domain ND448_15525 PF03144 Elongation factor Tu domain 2 ND448_15525 PF03143 Elongation factor Tu C-terminal domain ND448_15550 PF00485 Phosphoribulokinase / Uridine kinase family ND448_15555 PF03099 Biotin/lipoate A/B protein ligase family ND448_15555 PF08279 HTH domain ND448_15555 PF02237 Biotin protein ligase C terminal domain ND448_15560 PF01565 FAD binding domain ND448_15560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND448_15585 PF12724 Flavodoxin domain ND448_15590 PF02386 Cation transport protein ND448_15595 PF09186 Domain of unknown function (DUF1949) ND448_15595 PF01205 Uncharacterized protein family UPF0029 ND448_15600 PF00557 Metallopeptidase family M24 ND448_15605 PF00378 Enoyl-CoA hydratase/isomerase ND448_15605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND448_15605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND448_15610 PF02803 Thiolase, C-terminal domain ND448_15610 PF00108 Thiolase, N-terminal domain ND448_15615 PF00970 Oxidoreductase FAD-binding domain ND448_15615 PF00175 Oxidoreductase NAD-binding domain ND448_15620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND448_15630 PF02357 Transcription termination factor nusG ND448_15635 PF00490 Delta-aminolevulinic acid dehydratase ND448_15640 PF01026 TatD related DNase ND448_15645 PF00902 Sec-independent protein translocase protein (TatC) ND448_15655 PF02416 mttA/Hcf106 family ND448_15660 PF03109 ABC1 family ND448_15665 PF02036 SCP-2 sterol transfer family ND448_15670 PF01209 ubiE/COQ5 methyltransferase family ND448_15675 PF02646 RmuC family ND448_15680 PF09335 SNARE associated Golgi protein ND448_15685 PF13722 5TM C-terminal transporter carbon starvation CstA ND448_15685 PF02554 Carbon starvation protein CstA ND448_15695 PF01048 Phosphorylase superfamily ND448_15700 PF01738 Dienelactone hydrolase family ND448_15705 PF01717 Cobalamin-independent synthase, Catalytic domain ND448_15705 PF08267 Cobalamin-independent synthase, N-terminal domain ND448_15710 PF03466 LysR substrate binding domain ND448_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_15715 PF00892 EamA-like transporter family ND448_15725 PF03009 Glycerophosphoryl diester phosphodiesterase family ND448_15730 PF17912 MalK OB fold domain ND448_15730 PF00005 ABC transporter ND448_15735 PF00528 Binding-protein-dependent transport system inner membrane component ND448_15740 PF00528 Binding-protein-dependent transport system inner membrane component ND448_15745 PF13416 Bacterial extracellular solute-binding protein ND448_15780 PF00005 ABC transporter ND448_15785 PF00005 ABC transporter ND448_15785 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND448_15790 PF11862 Domain of unknown function (DUF3382) ND448_15790 PF02653 Branched-chain amino acid transport system / permease component ND448_15795 PF02653 Branched-chain amino acid transport system / permease component ND448_15800 PF13458 Periplasmic binding protein ND448_15805 PF12568 Acetyltransferase (GNAT) domain, PanZ ND448_15810 PF02595 Glycerate kinase family ND448_15815 PF02447 GntP family permease ND448_15820 PF05651 Putative sugar diacid recognition ND448_15820 PF17853 GGDEF-like domain ND448_15820 PF13556 PucR C-terminal helix-turn-helix domain ND448_15825 PF04542 Sigma-70 region 2 ND448_15825 PF04545 Sigma-70, region 4 ND448_15825 PF00140 Sigma-70 factor, region 1.2 ND448_15830 PF18075 FtsX extracellular domain ND448_15830 PF02687 FtsX-like permease family ND448_15835 PF00005 ABC transporter ND448_15840 PF02881 SRP54-type protein, helical bundle domain ND448_15840 PF00448 SRP54-type protein, GTPase domain ND448_15840 PF02881 SRP54-type protein, helical bundle domain ND448_15840 PF00448 SRP54-type protein, GTPase domain ND448_15850 PF06611 Protein of unknown function (DUF1145) ND448_15865 PF07947 YhhN family ND448_15870 PF00403 Heavy-metal-associated domain ND448_15875 PF01206 Sulfurtransferase TusA ND448_15880 PF02592 Putative vitamin uptake transporter ND448_15885 PF08786 DcrB ND448_15890 PF13183 4Fe-4S dicluster domain ND448_15890 PF02754 Cysteine-rich domain ND448_15895 PF00890 FAD binding domain ND448_15900 PF01266 FAD dependent oxidoreductase ND448_15900 PF04324 BFD-like [2Fe-2S] binding domain ND448_15910 PF07690 Major Facilitator Superfamily ND448_15915 PF03009 Glycerophosphoryl diester phosphodiesterase family ND448_15925 PF12146 Serine aminopeptidase, S33 ND448_15930 PF01810 LysE type translocator ND448_15935 PF00270 DEAD/DEAH box helicase ND448_15935 PF00570 HRDC domain ND448_15935 PF16124 RecQ zinc-binding ND448_15935 PF09382 RQC domain ND448_15935 PF00271 Helicase conserved C-terminal domain ND448_15940 PF02253 Phospholipase A1 ND448_15945 PF03061 Thioesterase superfamily ND448_15950 PF00892 EamA-like transporter family ND448_15955 PF01544 CorA-like Mg2+ transporter protein ND448_15965 PF09370 Phosphoenolpyruvate hydrolase-like ND448_15980 PF13361 UvrD-like helicase C-terminal domain ND448_15980 PF00580 UvrD/REP helicase N-terminal domain ND448_15985 PF13419 Haloacid dehalogenase-like hydrolase ND448_15990 PF02899 Phage integrase, N-terminal SAM-like domain ND448_15990 PF00589 Phage integrase family ND448_15995 PF04340 Protein of unknown function, DUF484 ND448_16000 PF01678 Diaminopimelate epimerase ND448_16005 PF13627 Prokaryotic lipoprotein-attachment site ND448_16010 PF01491 Frataxin-like domain ND448_16015 PF12633 Adenylate cyclase NT domain ND448_16015 PF01295 Adenylate cyclase, class-I ND448_16020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND448_16020 PF03900 Porphobilinogen deaminase, C-terminal domain ND448_16025 PF02602 Uroporphyrinogen-III synthase HemD ND448_16030 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND448_16035 PF07719 Tetratricopeptide repeat ND448_16035 PF07219 HemY protein N-terminus ND448_16065 PF00324 Amino acid permease ND448_16070 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND448_16075 PF06899 WzyE protein, O-antigen assembly polymerase ND448_16080 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND448_16085 PF01943 Polysaccharide biosynthesis protein ND448_16090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND448_16100 PF00483 Nucleotidyl transferase ND448_16105 PF16363 GDP-mannose 4,6 dehydratase ND448_16110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND448_16110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND448_16110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND448_16115 PF02350 UDP-N-acetylglucosamine 2-epimerase ND448_16120 PF02706 Chain length determinant protein ND448_16125 PF00953 Glycosyl transferase family 4 ND448_16130 PF07497 Rho termination factor, RNA-binding domain ND448_16130 PF07498 Rho termination factor, N-terminal domain ND448_16130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND448_16135 PF00085 Thioredoxin ND448_16140 PF00270 DEAD/DEAH box helicase ND448_16140 PF00271 Helicase conserved C-terminal domain ND448_16145 PF02541 Ppx/GppA phosphatase family ND448_16150 PF00580 UvrD/REP helicase N-terminal domain ND448_16150 PF13361 UvrD-like helicase C-terminal domain ND448_16160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND448_16160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND448_16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_16165 PF03466 LysR substrate binding domain ND448_16170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND448_16170 PF18416 N-acetylglucosamine binding protein domain 2 ND448_16175 PF00585 C-terminal regulatory domain of Threonine dehydratase ND448_16175 PF00291 Pyridoxal-phosphate dependent enzyme ND448_16180 PF00920 Dehydratase family ND448_16185 PF01063 Amino-transferase class IV ND448_16195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND448_16195 PF00205 Thiamine pyrophosphate enzyme, central domain ND448_16195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND448_16200 PF08046 IlvGEDA operon leader peptide ND448_16205 PF01078 Magnesium chelatase, subunit ChlI ND448_16205 PF13335 Magnesium chelatase, subunit ChlI C-terminal ND448_16210 PF04219 Protein of unknown function, DUF ND448_16215 PF03466 LysR substrate binding domain ND448_16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_16265 PF01177 Asp/Glu/Hydantoin racemase ND448_16270 PF00593 TonB dependent receptor ND448_16270 PF07715 TonB-dependent Receptor Plug Domain ND448_16275 PF05958 tRNA (Uracil-5-)-methyltransferase ND448_16280 PF07226 Protein of unknown function (DUF1422) ND448_16285 PF00440 Bacterial regulatory proteins, tetR family ND448_16290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND448_16290 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_16295 PF03466 LysR substrate binding domain ND448_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_16300 PF08534 Redoxin ND448_16300 PF00462 Glutaredoxin ND448_16305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND448_16305 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND448_16325 PF00529 HlyD membrane-fusion protein of T1SS ND448_16330 PF00005 ABC transporter ND448_16330 PF00664 ABC transporter transmembrane region ND448_16340 PF07715 TonB-dependent Receptor Plug Domain ND448_16340 PF00593 TonB dependent receptor ND448_16345 PF14698 Argininosuccinate lyase C-terminal ND448_16345 PF00206 Lyase ND448_16350 PF00764 Arginosuccinate synthase ND448_16355 PF00696 Amino acid kinase family ND448_16360 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND448_16360 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND448_16365 PF07687 Peptidase dimerisation domain ND448_16365 PF01546 Peptidase family M20/M25/M40 ND448_16370 PF00311 Phosphoenolpyruvate carboxylase ND448_16380 PF02219 Methylenetetrahydrofolate reductase ND448_16400 PF00696 Amino acid kinase family ND448_16400 PF00742 Homoserine dehydrogenase ND448_16400 PF03447 Homoserine dehydrogenase, NAD binding domain ND448_16405 PF01053 Cys/Met metabolism PLP-dependent enzyme ND448_16410 PF01340 Met Apo-repressor, MetJ ND448_16415 PF01197 Ribosomal protein L31 ND448_16420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND448_16420 PF18074 Primosomal protein N C-terminal domain ND448_16420 PF17764 3′ DNA-binding domain (3′BD) ND448_16420 PF00271 Helicase conserved C-terminal domain ND448_16420 PF00270 DEAD/DEAH box helicase ND448_16425 PF00356 Bacterial regulatory proteins, lacI family ND448_16430 PF05036 Sporulation related domain ND448_16435 PF00227 Proteasome subunit ND448_16440 PF00004 ATPase family associated with various cellular activities (AAA) ND448_16440 PF10431 C-terminal, D2-small domain, of ClpB protein ND448_16440 PF07724 AAA domain (Cdc48 subfamily) ND448_16445 PF01040 UbiA prenyltransferase family ND448_16450 PF03737 Aldolase/RraA ND448_16455 PF06005 Cell division protein ZapB ND448_16460 PF00230 Major intrinsic protein ND448_16465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND448_16465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND448_16470 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND448_16475 PF07690 Major Facilitator Superfamily ND448_16480 PF00175 Oxidoreductase NAD-binding domain ND448_16480 PF00970 Oxidoreductase FAD-binding domain ND448_16485 PF05656 Protein of unknown function (DUF805) ND448_16490 PF07305 Protein of unknown function (DUF1454) ND448_16495 PF00121 Triosephosphate isomerase ND448_16505 PF00365 Phosphofructokinase ND448_16510 PF01545 Cation efflux family ND448_16510 PF16916 Dimerisation domain of Zinc Transporter ND448_16515 PF07813 LTXXQ motif family protein ND448_16520 PF00486 Transcriptional regulatory protein, C terminal ND448_16520 PF00072 Response regulator receiver domain ND448_16525 PF16527 Two-component sensor protein CpxA, periplasmic domain ND448_16525 PF00672 HAMP domain ND448_16525 PF00512 His Kinase A (phospho-acceptor) domain ND448_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_16530 PF00588 SpoU rRNA Methylase family ND448_16535 PF06426 Serine acetyltransferase, N-terminal ND448_16535 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_16540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND448_16540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND448_16545 PF02556 Preprotein translocase subunit SecB ND448_16550 PF00462 Glutaredoxin ND448_16555 PF00581 Rhodanese-like domain ND448_16560 PF01676 Metalloenzyme superfamily ND448_16560 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND448_16565 PF01551 Peptidase family M23 ND448_16570 PF04748 Divergent polysaccharide deacetylase ND448_16575 PF08240 Alcohol dehydrogenase GroES-like domain ND448_16575 PF00107 Zinc-binding dehydrogenase ND448_16580 PF00155 Aminotransferase class I and II ND448_16585 PF01370 NAD dependent epimerase/dehydratase family ND448_16590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND448_16595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND448_16600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND448_16605 PF00535 Glycosyl transferase family 2 ND448_16610 PF01467 Cytidylyltransferase-like ND448_16615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND448_16615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND448_16615 PF06827 Zinc finger found in FPG and IleRS ND448_16620 PF00471 Ribosomal protein L33 ND448_16625 PF00830 Ribosomal L28 family ND448_16630 PF04002 RadC-like JAB domain ND448_16635 PF02441 Flavoprotein ND448_16635 PF04127 DNA / pantothenate metabolism flavoprotein ND448_16640 PF00692 dUTPase ND448_16645 PF00440 Bacterial regulatory proteins, tetR family ND448_16650 PF00156 Phosphoribosyl transferase domain ND448_16655 PF01138 3' exoribonuclease family, domain 1 ND448_16655 PF03725 3' exoribonuclease family, domain 2 ND448_16660 PF03755 YicC-like family, N-terminal region ND448_16660 PF08340 Domain of unknown function (DUF1732) ND448_16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND448_16670 PF03466 LysR substrate binding domain ND448_16675 PF00990 Diguanylate cyclase, GGDEF domain ND448_16675 PF13426 PAS domain ND448_16675 PF00563 EAL domain ND448_16680 PF00378 Enoyl-CoA hydratase/isomerase ND448_16685 PF07662 Na+ dependent nucleoside transporter C-terminus ND448_16685 PF07670 Nucleoside recognition ND448_16685 PF01773 Na+ dependent nucleoside transporter N-terminus ND448_16695 PF03458 UPF0126 domain ND448_16700 PF03120 NAD-dependent DNA ligase OB-fold domain ND448_16700 PF01653 NAD-dependent DNA ligase adenylation domain ND448_16705 PF00625 Guanylate kinase ND448_16710 PF01192 RNA polymerase Rpb6 ND448_16715 PF13291 ACT domain ND448_16715 PF04607 Region found in RelA / SpoT proteins ND448_16715 PF02824 TGS domain ND448_16720 PF12105 SpoU, rRNA methylase, C-terminal ND448_16720 PF00588 SpoU rRNA Methylase family ND448_16725 PF17191 RecG wedge domain ND448_16725 PF00271 Helicase conserved C-terminal domain ND448_16725 PF00270 DEAD/DEAH box helicase ND448_16730 PF03616 Sodium/glutamate symporter ND448_16735 PF00860 Permease family ND448_16740 PF05170 AsmA family ND448_16745 PF09500 Putative thioesterase (yiiD_Cterm) ND448_16745 PF00583 Acetyltransferase (GNAT) family ND448_16750 PF02580 D-Tyr-tRNA(Tyr) deacylase ND448_16755 PF03631 Virulence factor BrkB ND448_16760 PF13419 Haloacid dehalogenase-like hydrolase ND448_16765 PF00679 Elongation factor G C-terminus ND448_16765 PF00009 Elongation factor Tu GTP binding domain ND448_16765 PF03144 Elongation factor Tu domain 2 ND448_16770 PF03951 Glutamine synthetase, beta-Grasp domain ND448_16770 PF00120 Glutamine synthetase, catalytic domain ND448_16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND448_16775 PF00512 His Kinase A (phospho-acceptor) domain ND448_16775 PF00989 PAS fold ND448_16780 PF00072 Response regulator receiver domain ND448_16780 PF02954 Bacterial regulatory protein, Fis family ND448_16780 PF00158 Sigma-54 interaction domain ND448_16785 PF04055 Radical SAM superfamily ND448_16785 PF06969 HemN C-terminal domain ND448_16790 PF04220 Der GTPase activator (YihI) ND448_16795 PF01926 50S ribosome-binding GTPase ND448_16800 PF00476 DNA polymerase family A ND448_16800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND448_16800 PF01367 5'-3' exonuclease, C-terminal SAM fold ND448_16800 PF01612 3'-5' exonuclease ND448_16805 PF01323 DSBA-like thioredoxin domain ND448_16810 PF01636 Phosphotransferase enzyme family ND448_16815 PF06288 Protein of unknown function (DUF1040) ND448_16820 PF12804 MobA-like NTP transferase domain ND448_16825 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND448_16850 PF07729 FCD domain ND448_16850 PF00392 Bacterial regulatory proteins, gntR family ND448_16855 PF00356 Bacterial regulatory proteins, lacI family ND448_16860 PF00294 pfkB family carbohydrate kinase ND448_16865 PF13407 Periplasmic binding protein domain ND448_16870 PF02653 Branched-chain amino acid transport system / permease component ND448_16875 PF00005 ABC transporter ND448_16880 PF05025 RbsD / FucU transport protein family ND448_16885 PF02705 K+ potassium transporter ND448_16890 PF12592 Protein of unknown function (DUF3763) ND448_16890 PF07728 AAA domain (dynein-related subfamily) ND448_16890 PF17868 AAA lid domain ND448_16895 PF05762 VWA domain containing CoxE-like protein ND448_16905 PF03590 Aspartate-ammonia ligase ND448_16910 PF01037 Lrp/AsnC ligand binding domain ND448_16915 PF00258 Flavodoxin ND448_16920 PF01134 Glucose inhibited division protein A ND448_16920 PF13932 GidA associated domain ND448_16925 PF02527 rRNA small subunit methyltransferase G ND448_16930 PF03899 ATP synthase I chain ND448_16935 PF00119 ATP synthase A chain ND448_16940 PF00137 ATP synthase subunit C ND448_16945 PF00430 ATP synthase B/B' CF(0) ND448_16950 PF00213 ATP synthase delta (OSCP) subunit ND448_16955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND448_16955 PF00306 ATP synthase alpha/beta chain, C terminal domain ND448_16955 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND448_16960 PF00231 ATP synthase ND448_16965 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND448_16965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND448_16970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND448_16970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND448_16975 PF12804 MobA-like NTP transferase domain ND448_16975 PF00132 Bacterial transferase hexapeptide (six repeats) ND448_16980 PF01380 SIS domain ND448_16985 PF12849 PBP superfamily domain ND448_16990 PF00528 Binding-protein-dependent transport system inner membrane component ND448_16995 PF00528 Binding-protein-dependent transport system inner membrane component ND448_17000 PF00005 ABC transporter ND448_17005 PF01895 PhoU domain ND448_17010 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND448_17015 PF00528 Binding-protein-dependent transport system inner membrane component ND448_17020 PF00528 Binding-protein-dependent transport system inner membrane component ND448_17025 PF00860 Permease family ND448_17030 PF00672 HAMP domain ND448_17030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND448_17030 PF02203 Tar ligand binding domain homologue ND448_17040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND448_17040 PF02753 Pili assembly chaperone PapD, C-terminal domain ND448_17045 PF00577 Outer membrane usher protein ND448_17045 PF13953 PapC C-terminal domain ND448_17045 PF13954 PapC N-terminal domain ND448_17055 PF01926 50S ribosome-binding GTPase ND448_17055 PF12631 MnmE helical domain ND448_17055 PF10396 GTP-binding protein TrmE N-terminus ND448_17060 PF02096 60Kd inner membrane protein ND448_17060 PF14849 YidC periplasmic domain ND448_17065 PF01809 Putative membrane protein insertion efficiency factor ND448_17070 PF00825 Ribonuclease P ND448_17075 PF00468 Ribosomal protein L34 ND448_17090 PF00756 Putative esterase ND448_17100 PF08240 Alcohol dehydrogenase GroES-like domain ND448_17100 PF00107 Zinc-binding dehydrogenase ND448_17105 PF02583 Metal-sensitive transcriptional repressor ND448_17110 PF00465 Iron-containing alcohol dehydrogenase ND448_17130 PF02796 Helix-turn-helix domain of resolvase ND448_17130 PF00239 Resolvase, N terminal domain ND448_17215 PF00437 Type II/IV secretion system protein ND448_17230 PF01464 Transglycosylase SLT domain ND448_17240 PF04917 Bacterial shufflon protein, N-terminal constant region ND448_17255 PF00437 Type II/IV secretion system protein ND448_17265 PF08401 Domain of unknown function (DUF1738) ND448_17265 PF18818 Metallopeptidase superfamily domain ND448_17265 PF13362 Toprim domain ND448_17370 PF18821 Large polyvalent protein-associated domain 7 ND448_17370 PF03432 Relaxase/Mobilisation nuclease domain ND448_17390 PF01381 Helix-turn-helix ND448_17455 PF06406 StbA protein ND448_17460 PF13614 AAA domain ND448_17470 PF02796 Helix-turn-helix domain of resolvase ND448_17470 PF00239 Resolvase, N terminal domain ND448_17485 PF13610 DDE domain ND448_17490 PF02796 Helix-turn-helix domain of resolvase ND448_17490 PF00239 Resolvase, N terminal domain ND448_17495 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ND448_17500 PF13610 DDE domain