locus-tag class description ND447_00005 PF00308 Bacterial dnaA protein ND447_00005 PF08299 Bacterial dnaA protein helix-turn-helix ND447_00005 PF11638 DnaA N-terminal domain ND447_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ND447_00010 PF02767 DNA polymerase III beta subunit, central domain ND447_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ND447_00015 PF02463 RecF/RecN/SMC N terminal domain ND447_00020 PF01751 Toprim domain ND447_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ND447_00020 PF00204 DNA gyrase B ND447_00020 PF18053 DNA gyrase B subunit insert domain ND447_00030 PF12566 Protein of unknown function (DUF3748) ND447_00030 PF07676 WD40-like Beta Propeller Repeat ND447_00035 PF07119 Protein of unknown function (DUF1375) ND447_00040 PF00011 Hsp20/alpha crystallin family ND447_00045 PF00011 Hsp20/alpha crystallin family ND447_00050 PF02080 TrkA-C domain ND447_00050 PF06826 Predicted Permease Membrane Region ND447_00055 PF00155 Aminotransferase class I and II ND447_00060 PF13488 Glycine zipper ND447_00060 PF00691 OmpA family ND447_00080 PF03352 Methyladenine glycosylase ND447_00090 PF02091 Glycyl-tRNA synthetase alpha subunit ND447_00095 PF05746 DALR anticodon binding domain ND447_00095 PF02092 Glycyl-tRNA synthetase beta subunit ND447_00100 PF11254 Protein of unknown function (DUF3053) ND447_00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND447_00130 PF02378 Phosphotransferase system, EIIC ND447_00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND447_00135 PF01232 Mannitol dehydrogenase Rossmann domain ND447_00135 PF08125 Mannitol dehydrogenase C-terminal domain ND447_00140 PF05068 Mannitol repressor ND447_00145 PF10928 Protein of unknown function (DUF2810) ND447_00150 PF03473 MOSC domain ND447_00150 PF03475 3-alpha domain ND447_00155 PF02203 Tar ligand binding domain homologue ND447_00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_00155 PF00672 HAMP domain ND447_00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND447_00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND447_00165 PF02634 FdhD/NarQ family ND447_00175 PF09163 Formate dehydrogenase N, transmembrane ND447_00175 PF13247 4Fe-4S dicluster domain ND447_00180 PF01292 Prokaryotic cytochrome b561 ND447_00185 PF04216 Protein involved in formate dehydrogenase formation ND447_00190 PF12390 Selenocysteine synthase N terminal ND447_00190 PF03841 L-seryl-tRNA selenium transferase ND447_00195 PF00009 Elongation factor Tu GTP binding domain ND447_00195 PF09107 Elongation factor SelB, winged helix ND447_00195 PF09106 Elongation factor SelB, winged helix ND447_00195 PF03144 Elongation factor Tu domain 2 ND447_00200 PF01427 D-ala-D-ala dipeptidase ND447_00205 PF07690 Major Facilitator Superfamily ND447_00210 PF01757 Acyltransferase family ND447_00220 PF00589 Phage integrase family ND447_00220 PF14659 Phage integrase, N-terminal SAM-like domain ND447_00220 PF13356 Arm DNA-binding domain ND447_00230 PF04606 Ogr/Delta-like zinc finger ND447_00255 PF17391 Urocanase N-terminal domain ND447_00255 PF17392 Urocanase C-terminal domain ND447_00255 PF01175 Urocanase Rossmann-like domain ND447_00260 PF00221 Aromatic amino acid lyase ND447_00265 PF00324 Amino acid permease ND447_00275 PF12146 Serine aminopeptidase, S33 ND447_00280 PF08019 Phosphoethanolamine transferase EptA/EptB ND447_00280 PF00884 Sulfatase ND447_00285 PF00196 Bacterial regulatory proteins, luxR family ND447_00285 PF00072 Response regulator receiver domain ND447_00290 PF05231 MASE1 ND447_00290 PF07730 Histidine kinase ND447_00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_00295 PF07690 Major Facilitator Superfamily ND447_00305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_00310 PF00528 Binding-protein-dependent transport system inner membrane component ND447_00315 PF12911 N-terminal TM domain of oligopeptide transport permease C ND447_00315 PF00528 Binding-protein-dependent transport system inner membrane component ND447_00320 PF00005 ABC transporter ND447_00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_00325 PF00005 ABC transporter ND447_00330 PF11658 Cellulose biosynthesis protein BcsG ND447_00335 PF11120 Cellulose biosynthesis protein BcsF ND447_00340 PF10995 Cellulose biosynthesis GIL ND447_00350 PF06564 Cellulose biosynthesis protein BcsQ ND447_00355 PF07238 PilZ domain ND447_00355 PF00535 Glycosyl transferase family 2 ND447_00355 PF03552 Cellulose synthase ND447_00360 PF03170 Bacterial cellulose synthase subunit ND447_00365 PF01270 Glycosyl hydrolases family 8 ND447_00370 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND447_00375 PF00672 HAMP domain ND447_00375 PF00563 EAL domain ND447_00375 PF17154 Gammaproteobacterial periplasmic sensor domain ND447_00375 PF00990 Diguanylate cyclase, GGDEF domain ND447_00380 PF00375 Sodium:dicarboxylate symporter family ND447_00385 PF05193 Peptidase M16 inactive domain ND447_00385 PF00675 Insulinase (Peptidase family M16) ND447_00390 PF00294 pfkB family carbohydrate kinase ND447_00395 PF01361 Tautomerase enzyme ND447_00400 PF00563 EAL domain ND447_00405 PF02611 CDP-diacylglycerol pyrophosphatase ND447_00410 PF03631 Virulence factor BrkB ND447_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_00415 PF03466 LysR substrate binding domain ND447_00420 PF00375 Sodium:dicarboxylate symporter family ND447_00425 PF01053 Cys/Met metabolism PLP-dependent enzyme ND447_00430 PF02369 Bacterial Ig-like domain (group 1) ND447_00430 PF11924 Inverse autotransporter, beta-domain ND447_00430 PF07979 Intimin C-type lectin domain ND447_00430 PF09134 Invasin, domain 3 ND447_00435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_00435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND447_00440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND447_00445 PF01432 Peptidase family M3 ND447_00450 PF04445 Putative SAM-dependent methyltransferase ND447_00455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND447_00455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND447_00460 PF00582 Universal stress protein family ND447_00465 PF10625 Universal stress protein B (UspB) ND447_00470 PF01384 Phosphate transporter family ND447_00480 PF01810 LysE type translocator ND447_00485 PF00583 Acetyltransferase (GNAT) family ND447_00495 PF17954 Quercetinase C-terminal cupin domain ND447_00495 PF02678 Pirin ND447_00500 PF00356 Bacterial regulatory proteins, lacI family ND447_00500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND447_00505 PF02447 GntP family permease ND447_00510 PF01202 Shikimate kinase ND447_00515 PF01914 MarC family integral membrane protein ND447_00520 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND447_00520 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND447_00525 PF07694 5TMR of 5TMR-LYT ND447_00525 PF06580 Histidine kinase ND447_00530 PF02806 Alpha amylase, C-terminal all-beta domain ND447_00530 PF00128 Alpha amylase, catalytic domain ND447_00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND447_00535 PF18390 Glycogen debranching enzyme C-terminal domain ND447_00535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND447_00535 PF00128 Alpha amylase, catalytic domain ND447_00540 PF00483 Nucleotidyl transferase ND447_00545 PF00534 Glycosyl transferases group 1 ND447_00545 PF08323 Starch synthase catalytic domain ND447_00550 PF00343 Carbohydrate phosphorylase ND447_00555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND447_00555 PF01266 FAD dependent oxidoreductase ND447_00560 PF08220 DeoR-like helix-turn-helix domain ND447_00560 PF00455 DeoR C terminal sensor domain ND447_00565 PF01694 Rhomboid family ND447_00565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND447_00570 PF00581 Rhodanese-like domain ND447_00575 PF00196 Bacterial regulatory proteins, luxR family ND447_00575 PF17874 MalT-like TPR region ND447_00580 PF00343 Carbohydrate phosphorylase ND447_00585 PF02446 4-alpha-glucanotransferase ND447_00590 PF01521 Iron-sulphur cluster biosynthesis ND447_00590 PF01106 NifU-like domain ND447_00595 PF00156 Phosphoribosyl transferase domain ND447_00600 PF00561 alpha/beta hydrolase fold ND447_00610 PF09012 FeoC like transcriptional regulator ND447_00615 PF07664 Ferrous iron transport protein B C terminus ND447_00615 PF17910 FeoB cytosolic helical domain ND447_00615 PF02421 Ferrous iron transport protein B ND447_00615 PF07670 Nucleoside recognition ND447_00620 PF04023 FeoA domain ND447_00625 PF16921 Tex protein YqgF-like domain ND447_00625 PF17674 HHH domain ND447_00625 PF00575 S1 RNA binding domain ND447_00625 PF09371 Tex-like protein N-terminal domain ND447_00650 PF03449 Transcription elongation factor, N-terminal ND447_00650 PF01272 Transcription elongation factor, GreA/GreB, C-term ND447_00655 PF00486 Transcriptional regulatory protein, C terminal ND447_00655 PF00072 Response regulator receiver domain ND447_00660 PF00512 His Kinase A (phospho-acceptor) domain ND447_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_00660 PF00672 HAMP domain ND447_00665 PF01293 Phosphoenolpyruvate carboxykinase ND447_00670 PF01430 Hsp33 protein ND447_00675 PF01479 S4 domain ND447_00680 PF13419 Haloacid dehalogenase-like hydrolase ND447_00685 PF07095 Intracellular growth attenuator protein IgaA ND447_00690 PF00293 NUDIX domain ND447_00695 PF00912 Transglycosylase ND447_00695 PF00905 Penicillin binding protein transpeptidase domain ND447_00695 PF17092 Penicillin-binding protein OB-like domain ND447_00720 PF03958 Bacterial type II/III secretion system short domain ND447_00720 PF00263 Bacterial type II and III secretion system protein ND447_00725 PF01202 Shikimate kinase ND447_00730 PF01761 3-dehydroquinate synthase ND447_00735 PF05036 Sporulation related domain ND447_00740 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND447_00745 PF00834 Ribulose-phosphate 3 epimerase family ND447_00750 PF13419 Haloacid dehalogenase-like hydrolase ND447_00755 PF00579 tRNA synthetases class I (W and Y) ND447_00760 PF10414 Sirohaem synthase dimerisation region ND447_00760 PF14824 Sirohaem biosynthesis protein central ND447_00760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND447_00765 PF01226 Formate/nitrite transporter ND447_00770 PF13806 Rieske-like [2Fe-2S] domain ND447_00775 PF04324 BFD-like [2Fe-2S] binding domain ND447_00775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND447_00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_00775 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND447_00775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND447_00780 PF07969 Amidohydrolase family ND447_00785 PF07690 Major Facilitator Superfamily ND447_00800 PF00356 Bacterial regulatory proteins, lacI family ND447_00805 PF02056 Family 4 glycosyl hydrolase ND447_00805 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND447_00810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND447_00815 PF00117 Glutamine amidotransferase class-I ND447_00820 PF00202 Aminotransferase class-III ND447_00825 PF12805 FUSC-like inner membrane protein yccS ND447_00830 PF13545 Crp-like helix-turn-helix domain ND447_00830 PF00027 Cyclic nucleotide-binding domain ND447_00835 PF02566 OsmC-like protein ND447_00855 PF00156 Phosphoribosyl transferase domain ND447_00860 PF00291 Pyridoxal-phosphate dependent enzyme ND447_00865 PF00485 Phosphoribulokinase / Uridine kinase family ND447_00870 PF06794 Uncharacterised protein family (UPF0270) ND447_00875 PF00561 alpha/beta hydrolase fold ND447_00880 PF01810 LysE type translocator ND447_00885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND447_00890 PF00535 Glycosyl transferase family 2 ND447_00895 PF00005 ABC transporter ND447_00895 PF12848 ABC transporter ND447_00900 PF02525 Flavodoxin-like fold ND447_00905 PF00999 Sodium/hydrogen exchanger family ND447_00905 PF02254 TrkA-N domain ND447_00910 PF09526 Probable metal-binding protein (DUF2387) ND447_00915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND447_00920 PF04102 SlyX ND447_00925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND447_00925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND447_00930 PF13309 HTH domain ND447_00930 PF08348 YheO-like PAS domain ND447_00935 PF02635 DsrE/DsrF-like family ND447_00940 PF02635 DsrE/DsrF-like family ND447_00945 PF04077 DsrH like protein ND447_00950 PF00164 Ribosomal protein S12/S23 ND447_00955 PF00177 Ribosomal protein S7p/S5e ND447_00960 PF00679 Elongation factor G C-terminus ND447_00960 PF14492 Elongation Factor G, domain II ND447_00960 PF00009 Elongation factor Tu GTP binding domain ND447_00960 PF03144 Elongation factor Tu domain 2 ND447_00960 PF03764 Elongation factor G, domain IV ND447_00965 PF00009 Elongation factor Tu GTP binding domain ND447_00965 PF03144 Elongation factor Tu domain 2 ND447_00965 PF03143 Elongation factor Tu C-terminal domain ND447_00970 PF04324 BFD-like [2Fe-2S] binding domain ND447_00975 PF00210 Ferritin-like domain ND447_00980 PF00338 Ribosomal protein S10p/S20e ND447_00985 PF00297 Ribosomal protein L3 ND447_00990 PF00573 Ribosomal protein L4/L1 family ND447_00995 PF00276 Ribosomal protein L23 ND447_01000 PF00181 Ribosomal Proteins L2, RNA binding domain ND447_01000 PF03947 Ribosomal Proteins L2, C-terminal domain ND447_01005 PF00203 Ribosomal protein S19 ND447_01010 PF00237 Ribosomal protein L22p/L17e ND447_01015 PF07650 KH domain ND447_01015 PF00189 Ribosomal protein S3, C-terminal domain ND447_01020 PF00252 Ribosomal protein L16p/L10e ND447_01025 PF00831 Ribosomal L29 protein ND447_01030 PF00366 Ribosomal protein S17 ND447_01035 PF00238 Ribosomal protein L14p/L23e ND447_01040 PF00467 KOW motif ND447_01040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND447_01045 PF00281 Ribosomal protein L5 ND447_01045 PF00673 ribosomal L5P family C-terminus ND447_01050 PF00253 Ribosomal protein S14p/S29e ND447_01055 PF00410 Ribosomal protein S8 ND447_01060 PF00347 Ribosomal protein L6 ND447_01065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND447_01070 PF00333 Ribosomal protein S5, N-terminal domain ND447_01070 PF03719 Ribosomal protein S5, C-terminal domain ND447_01075 PF00327 Ribosomal protein L30p/L7e ND447_01080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND447_01085 PF00344 SecY translocase ND447_01090 PF00444 Ribosomal protein L36 ND447_01095 PF00416 Ribosomal protein S13/S18 ND447_01100 PF00411 Ribosomal protein S11 ND447_01105 PF00163 Ribosomal protein S4/S9 N-terminal domain ND447_01105 PF01479 S4 domain ND447_01110 PF01000 RNA polymerase Rpb3/RpoA insert domain ND447_01110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND447_01110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND447_01115 PF01196 Ribosomal protein L17 ND447_01120 PF13411 MerR HTH family regulatory protein ND447_01125 PF03889 Alternative ribosome-rescue factor A ND447_01130 PF01741 Large-conductance mechanosensitive channel, MscL ND447_01135 PF02080 TrkA-C domain ND447_01135 PF02254 TrkA-N domain ND447_01140 PF01189 16S rRNA methyltransferase RsmB/F ND447_01140 PF01029 NusB family ND447_01145 PF02911 Formyl transferase, C-terminal domain ND447_01145 PF00551 Formyl transferase ND447_01150 PF01327 Polypeptide deformylase ND447_01155 PF02481 DNA recombination-mediator protein A ND447_01155 PF17782 DprA winged helix domain ND447_01160 PF04361 Protein of unknown function (DUF494) ND447_01165 PF01396 Topoisomerase DNA binding C4 zinc finger ND447_01170 PF01300 Telomere recombination ND447_01175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND447_01175 PF01488 Shikimate / quinate 5-dehydrogenase ND447_01175 PF08501 Shikimate dehydrogenase substrate binding domain ND447_01180 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_01210 PF00474 Sodium:solute symporter family ND447_01215 PF04341 Protein of unknown function, DUF485 ND447_01220 PF16177 Acetyl-coenzyme A synthetase N-terminus ND447_01220 PF00501 AMP-binding enzyme ND447_01220 PF13193 AMP-binding enzyme C-terminal domain ND447_01225 PF00375 Sodium:dicarboxylate symporter family ND447_01235 PF04143 Sulphur transport ND447_01240 PF01206 Sulfurtransferase TusA ND447_01245 PF02719 Polysaccharide biosynthesis protein ND447_01250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND447_01255 PF02350 UDP-N-acetylglucosamine 2-epimerase ND447_01260 PF08666 SAF domain ND447_01260 PF03102 NeuB family ND447_01270 PF00483 Nucleotidyl transferase ND447_01280 PF02348 Cytidylyltransferase ND447_01280 PF13472 GDSL-like Lipase/Acylhydrolase family ND447_01305 PF00795 Carbon-nitrogen hydrolase ND447_01305 PF02540 NAD synthase ND447_01310 PF00117 Glutamine amidotransferase class-I ND447_01315 PF00977 Histidine biosynthesis protein ND447_01320 PF08485 Polysaccharide biosynthesis protein C-terminal ND447_01320 PF02719 Polysaccharide biosynthesis protein ND447_01325 PF01370 NAD dependent epimerase/dehydratase family ND447_01330 PF02350 UDP-N-acetylglucosamine 2-epimerase ND447_01355 PF02683 Cytochrome C biogenesis protein transmembrane region ND447_01355 PF11412 Disulphide bond corrector protein DsbC ND447_01360 PF03091 CutA1 divalent ion tolerance protein ND447_01365 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND447_01370 PF00206 Lyase ND447_01370 PF10415 Fumarase C C-terminus ND447_01375 PF04186 FxsA cytoplasmic membrane protein ND447_01380 PF00166 Chaperonin 10 Kd subunit ND447_01385 PF00118 TCP-1/cpn60 chaperonin family ND447_01390 PF13698 Domain of unknown function (DUF4156) ND447_01395 PF04055 Radical SAM superfamily ND447_01400 PF01132 Elongation factor P (EF-P) OB domain ND447_01400 PF08207 Elongation factor P (EF-P) KOW-like domain ND447_01400 PF09285 Elongation factor P, C-terminal ND447_01405 PF18416 N-acetylglucosamine binding protein domain 2 ND447_01405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND447_01410 PF00196 Bacterial regulatory proteins, luxR family ND447_01420 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_01420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_01425 PF13953 PapC C-terminal domain ND447_01425 PF13954 PapC N-terminal domain ND447_01425 PF00577 Outer membrane usher protein ND447_01430 PF00419 Fimbrial protein ND447_01435 PF00893 Small Multidrug Resistance protein ND447_01440 PF08212 Lipocalin-like domain ND447_01445 PF02313 Fumarate reductase subunit D ND447_01450 PF02300 Fumarate reductase subunit C ND447_01455 PF13183 4Fe-4S dicluster domain ND447_01455 PF13085 2Fe-2S iron-sulfur cluster binding domain ND447_01460 PF02910 Fumarate reductase flavoprotein C-term ND447_01460 PF00890 FAD binding domain ND447_01465 PF00152 tRNA synthetases class II (D, K and N) ND447_01470 PF00924 Mechanosensitive ion channel ND447_01470 PF12795 Mechanosensitive ion channel porin domain ND447_01470 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND447_01475 PF02666 Phosphatidylserine decarboxylase ND447_01480 PF03193 RsgA GTPase ND447_01485 PF00929 Exonuclease ND447_01505 PF08331 Domain of unknown function (DUF1730) ND447_01510 PF03853 YjeF-related protein N-terminus ND447_01510 PF01256 Carbohydrate kinase ND447_01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND447_01520 PF01520 N-acetylmuramoyl-L-alanine amidase ND447_01525 PF01119 DNA mismatch repair protein, C-terminal domain ND447_01525 PF08676 MutL C terminal dimerisation domain ND447_01535 PF17209 Hfq protein ND447_01540 PF16360 GTP-binding GTPase Middle Region ND447_01540 PF13167 GTP-binding GTPase N-terminal ND447_01540 PF01926 50S ribosome-binding GTPase ND447_01545 PF12221 Bacterial membrane protein N terminal ND447_01545 PF01145 SPFH domain / Band 7 family ND447_01550 PF01145 SPFH domain / Band 7 family ND447_01555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND447_01560 PF00709 Adenylosuccinate synthetase ND447_01565 PF02082 Transcriptional regulator ND447_01570 PF08206 Ribonuclease B OB domain ND447_01570 PF00575 S1 RNA binding domain ND447_01570 PF17876 Cold shock domain ND447_01570 PF08461 Ribonuclease R winged-helix domain ND447_01570 PF00773 RNB domain ND447_01575 PF00588 SpoU rRNA Methylase family ND447_01575 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND447_01595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_01600 PF13953 PapC C-terminal domain ND447_01600 PF00577 Outer membrane usher protein ND447_01600 PF13954 PapC N-terminal domain ND447_01620 PF00326 Prolyl oligopeptidase family ND447_01630 PF01250 Ribosomal protein S6 ND447_01635 PF00436 Single-strand binding protein family ND447_01640 PF01084 Ribosomal protein S18 ND447_01645 PF03948 Ribosomal protein L9, C-terminal domain ND447_01645 PF01281 Ribosomal protein L9, N-terminal domain ND447_01650 PF04225 Opacity-associated protein A LysM-like domain ND447_01650 PF08525 Opacity-associated protein A N-terminal motif ND447_01655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND447_01655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND447_01660 PF01814 Hemerythrin HHE cation binding domain ND447_01660 PF04405 Domain of Unknown function (DUF542) ND447_01665 PF02872 5'-nucleotidase, C-terminal domain ND447_01665 PF00149 Calcineurin-like phosphoesterase ND447_01670 PF00459 Inositol monophosphatase family ND447_01675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND447_01680 PF06526 Protein of unknown function (DUF1107) ND447_01685 PF00571 CBS domain ND447_01685 PF03471 Transporter associated domain ND447_01685 PF01595 Cyclin M transmembrane N-terminal domain ND447_01690 PF01625 Peptide methionine sulfoxide reductase ND447_01695 PF01103 Surface antigen ND447_01695 PF07244 Surface antigen variable number repeat ND447_01695 PF17243 POTRA domain TamA domain 1 ND447_01700 PF04357 TamB, inner membrane protein subunit of TAM complex ND447_01705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND447_01710 PF00719 Inorganic pyrophosphatase ND447_01715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND447_01720 PF08245 Mur ligase middle domain ND447_01720 PF01225 Mur ligase family, catalytic domain ND447_01720 PF02875 Mur ligase family, glutamate ligase domain ND447_01725 PF02863 Arginine repressor, C-terminal domain ND447_01725 PF01316 Arginine repressor, DNA binding domain ND447_01730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND447_01730 PF00056 lactate/malate dehydrogenase, NAD binding domain ND447_01735 PF13693 Winged helix-turn-helix DNA-binding ND447_01750 PF00348 Polyprenyl synthetase ND447_01755 PF00829 Ribosomal prokaryotic L21 protein ND447_01760 PF01016 Ribosomal L27 protein ND447_01765 PF00892 EamA-like transporter family ND447_01770 PF01018 GTP1/OBG ND447_01770 PF01926 50S ribosome-binding GTPase ND447_01775 PF00672 HAMP domain ND447_01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_01775 PF00512 His Kinase A (phospho-acceptor) domain ND447_01780 PF00486 Transcriptional regulatory protein, C terminal ND447_01780 PF00072 Response regulator receiver domain ND447_01785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND447_01790 PF01272 Transcription elongation factor, GreA/GreB, C-term ND447_01790 PF03449 Transcription elongation factor, N-terminal ND447_01795 PF01985 CRS1 / YhbY (CRM) domain ND447_01800 PF01728 FtsJ-like methyltransferase ND447_01805 PF00004 ATPase family associated with various cellular activities (AAA) ND447_01805 PF17862 AAA+ lid domain ND447_01805 PF06480 FtsH Extracellular ND447_01805 PF01434 Peptidase family M41 ND447_01810 PF00809 Pterin binding enzyme ND447_01815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND447_01815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND447_01815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND447_01815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND447_01820 PF03840 Preprotein translocase SecG subunit ND447_01835 PF02576 RimP N-terminal domain ND447_01835 PF17384 RimP C-terminal SH3 domain ND447_01840 PF13184 NusA-like KH domain ND447_01840 PF08529 NusA N-terminal domain ND447_01840 PF00575 S1 RNA binding domain ND447_01845 PF03144 Elongation factor Tu domain 2 ND447_01845 PF00009 Elongation factor Tu GTP binding domain ND447_01845 PF08364 Bacterial translation initiation factor IF-2 associated region ND447_01845 PF04760 Translation initiation factor IF-2, N-terminal region ND447_01845 PF11987 Translation-initiation factor 2 ND447_01850 PF02033 Ribosome-binding factor A ND447_01855 PF09157 Pseudouridine synthase II TruB, C-terminal ND447_01855 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND447_01855 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND447_01860 PF00312 Ribosomal protein S15 ND447_01865 PF00013 KH domain ND447_01865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND447_01865 PF01138 3' exoribonuclease family, domain 1 ND447_01865 PF03725 3' exoribonuclease family, domain 2 ND447_01865 PF00575 S1 RNA binding domain ND447_01870 PF13181 Tetratricopeptide repeat ND447_01870 PF07719 Tetratricopeptide repeat ND447_01875 PF00270 DEAD/DEAH box helicase ND447_01875 PF03880 DbpA RNA binding domain ND447_01875 PF12343 Cold shock protein DEAD box A ND447_01875 PF00271 Helicase conserved C-terminal domain ND447_01880 PF00296 Luciferase-like monooxygenase ND447_01890 PF03313 Serine dehydratase alpha chain ND447_01895 PF01136 Peptidase family U32 ND447_01900 PF01136 Peptidase family U32 ND447_01905 PF02036 SCP-2 sterol transfer family ND447_01910 PF13508 Acetyltransferase (GNAT) domain ND447_01915 PF01541 GIY-YIG catalytic domain ND447_01920 PF13520 Amino acid permease ND447_01925 PF01276 Orn/Lys/Arg decarboxylase, major domain ND447_01925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND447_01925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND447_01930 PF10940 Protein of unknown function (DUF2618) ND447_01940 PF13460 NAD(P)H-binding ND447_01945 PF12706 Beta-lactamase superfamily domain ND447_01955 PF07969 Amidohydrolase family ND447_01960 PF00005 ABC transporter ND447_01965 PF00005 ABC transporter ND447_01970 PF06007 Phosphonate metabolism protein PhnJ ND447_01975 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND447_01980 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND447_01985 PF06754 Phosphonate metabolism protein PhnG ND447_01995 PF03477 ATP cone domain ND447_01995 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND447_02000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND447_02000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND447_02005 PF06877 Regulator of ribonuclease activity B ND447_02010 PF00583 Acetyltransferase (GNAT) family ND447_02015 PF00133 tRNA synthetases class I (I, L, M and V) ND447_02015 PF08264 Anticodon-binding domain of tRNA ND447_02015 PF10458 Valyl tRNA synthetase tRNA binding arm ND447_02020 PF04364 DNA polymerase III chi subunit, HolC ND447_02025 PF00883 Cytosol aminopeptidase family, catalytic domain ND447_02025 PF02789 Cytosol aminopeptidase family, N-terminal domain ND447_02030 PF03739 Lipopolysaccharide export system permease LptF/LptG ND447_02035 PF03739 Lipopolysaccharide export system permease LptF/LptG ND447_02075 PF04221 RelB antitoxin ND447_02080 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ND447_02125 PF00892 EamA-like transporter family ND447_02170 PF01344 Kelch motif ND447_02175 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND447_02180 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND447_02180 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND447_02180 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ND447_02195 PF09093 Lyase, catalytic ND447_02195 PF09092 Lyase, N terminal ND447_02195 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND447_02195 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND447_02200 PF00884 Sulfatase ND447_02205 PF00455 DeoR C terminal sensor domain ND447_02205 PF08220 DeoR-like helix-turn-helix domain ND447_02210 PF08013 Tagatose 6 phosphate kinase ND447_02215 PF01380 SIS domain ND447_02220 PF03830 PTS system sorbose subfamily IIB component ND447_02225 PF03609 PTS system sorbose-specific iic component ND447_02230 PF03613 PTS system mannose/fructose/sorbose family IID component ND447_02240 PF01979 Amidohydrolase family ND447_02245 PF04962 KduI/IolB family ND447_02255 PF07470 Glycosyl Hydrolase Family 88 ND447_02260 PF04055 Radical SAM superfamily ND447_02260 PF13186 Iron-sulfur cluster-binding domain ND447_02265 PF00884 Sulfatase ND447_02275 PF01116 Fructose-bisphosphate aldolase class-II ND447_02285 PF10696 Protein of unknown function (DUF2501) ND447_02290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND447_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND447_02310 PF00873 AcrB/AcrD/AcrF family ND447_02315 PF00465 Iron-containing alcohol dehydrogenase ND447_02320 PF02733 Dak1 domain ND447_02325 PF02734 DAK2 domain ND447_02330 PF03610 PTS system fructose IIA component ND447_02330 PF05524 PEP-utilising enzyme, N-terminal ND447_02330 PF00391 PEP-utilising enzyme, mobile domain ND447_02330 PF00381 PTS HPr component phosphorylation site ND447_02335 PF02954 Bacterial regulatory protein, Fis family ND447_02335 PF00989 PAS fold ND447_02335 PF00158 Sigma-54 interaction domain ND447_02340 PF00990 Diguanylate cyclase, GGDEF domain ND447_02345 PF07256 Protein of unknown function (DUF1435) ND447_02365 PF08468 Methyltransferase small domain N-terminal ND447_02365 PF05175 Methyltransferase small domain ND447_02370 PF03603 DNA polymerase III psi subunit ND447_02375 PF00583 Acetyltransferase (GNAT) family ND447_02380 PF16658 Class II release factor RF3, C-terminal domain ND447_02380 PF00009 Elongation factor Tu GTP binding domain ND447_02380 PF03144 Elongation factor Tu domain 2 ND447_02385 PF04972 BON domain ND447_02390 PF07043 Protein of unknown function (DUF1328) ND447_02395 PF01734 Patatin-like phospholipase ND447_02400 PF01026 TatD related DNase ND447_02405 PF07670 Nucleoside recognition ND447_02405 PF07662 Na+ dependent nucleoside transporter C-terminus ND447_02405 PF01773 Na+ dependent nucleoside transporter N-terminus ND447_02410 PF01791 DeoC/LacD family aldolase ND447_02415 PF02885 Glycosyl transferase family, helical bundle domain ND447_02415 PF00591 Glycosyl transferase family, a/b domain ND447_02415 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND447_02420 PF01676 Metalloenzyme superfamily ND447_02425 PF01048 Phosphorylase superfamily ND447_02430 PF10144 Bacterial virulence factor haemolysin ND447_02435 PF18429 Domain of unknown function (DUF5609) ND447_02440 PF18073 Rubredoxin metal binding domain ND447_02445 PF13521 AAA domain ND447_02445 PF01381 Helix-turn-helix ND447_02450 PF00005 ABC transporter ND447_02450 PF12848 ABC transporter ND447_02465 PF00689 Cation transporting ATPase, C-terminus ND447_02465 PF00690 Cation transporter/ATPase, N-terminus ND447_02475 PF01464 Transglycosylase SLT domain ND447_02475 PF14718 Soluble lytic murein transglycosylase L domain ND447_02480 PF01371 Trp repressor protein ND447_02485 PF01931 Protein of unknown function DUF84 ND447_02490 PF00300 Histidine phosphatase superfamily (branch 1) ND447_02495 PF12833 Helix-turn-helix domain ND447_02495 PF06445 GyrI-like small molecule binding domain ND447_02500 PF05981 CreA protein ND447_02505 PF00072 Response regulator receiver domain ND447_02505 PF00486 Transcriptional regulatory protein, C terminal ND447_02515 PF08254 Threonine leader peptide ND447_02520 PF00696 Amino acid kinase family ND447_02520 PF01842 ACT domain ND447_02520 PF13840 ACT domain ND447_02520 PF00742 Homoserine dehydrogenase ND447_02520 PF03447 Homoserine dehydrogenase, NAD binding domain ND447_02525 PF08544 GHMP kinases C terminal ND447_02525 PF00288 GHMP kinases N terminal domain ND447_02530 PF14821 Threonine synthase N terminus ND447_02530 PF00291 Pyridoxal-phosphate dependent enzyme ND447_02535 PF03883 Peroxide stress protein YaaA ND447_02540 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND447_02545 PF00994 Probable molybdopterin binding domain ND447_02550 PF07690 Major Facilitator Superfamily ND447_02560 PF01184 GPR1/FUN34/yaaH family ND447_02565 PF00012 Hsp70 protein ND447_02570 PF00684 DnaJ central domain ND447_02570 PF00226 DnaJ domain ND447_02570 PF01556 DnaJ C terminal domain ND447_02575 PF06965 Na+/H+ antiporter 1 ND447_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_02580 PF03466 LysR substrate binding domain ND447_02585 PF01649 Ribosomal protein S20 ND447_02590 PF01687 Riboflavin kinase ND447_02590 PF06574 FAD synthetase ND447_02595 PF06827 Zinc finger found in FPG and IleRS ND447_02595 PF08264 Anticodon-binding domain of tRNA ND447_02595 PF00133 tRNA synthetases class I (I, L, M and V) ND447_02600 PF01252 Signal peptidase (SPase) II ND447_02605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND447_02610 PF02401 LytB protein ND447_02615 PF05173 Dihydrodipicolinate reductase, C-terminus ND447_02615 PF01113 Dihydrodipicolinate reductase, N-terminus ND447_02620 PF00117 Glutamine amidotransferase class-I ND447_02620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND447_02625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND447_02625 PF02142 MGS-like domain ND447_02625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND447_02630 PF01810 LysE type translocator ND447_02635 PF06738 Putative threonine/serine exporter ND447_02640 PF12821 Threonine/Serine exporter, ThrE ND447_02645 PF00186 Dihydrofolate reductase ND447_02655 PF00149 Calcineurin-like phosphoesterase ND447_02660 PF04379 ApaG domain ND447_02665 PF00398 Ribosomal RNA adenine dimethylase ND447_02670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND447_02675 PF00639 PPIC-type PPIASE domain ND447_02675 PF09312 SurA N-terminal domain ND447_02680 PF04453 LPS transport system D ND447_02680 PF03968 OstA-like protein ND447_02685 PF00226 DnaJ domain ND447_02685 PF05099 Tellurite resistance protein TerB ND447_02690 PF00849 RNA pseudouridylate synthase ND447_02695 PF00271 Helicase conserved C-terminal domain ND447_02695 PF12137 RNA polymerase recycling family C-terminal ND447_02695 PF00176 SNF2 family N-terminal domain ND447_02695 PF18339 RapA N-terminal Tudor like domain 1 ND447_02695 PF18337 RapA N-terminal Tudor like domain ND447_02700 PF00136 DNA polymerase family B ND447_02700 PF03104 DNA polymerase family B, exonuclease domain ND447_02705 PF09335 SNARE associated Golgi protein ND447_02710 PF00005 ABC transporter ND447_02715 PF00528 Binding-protein-dependent transport system inner membrane component ND447_02725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_02725 PF12793 Sugar transport-related sRNA regulator N-term ND447_02735 PF07690 Major Facilitator Superfamily ND447_02740 PF00694 Aconitase C-terminal domain ND447_02745 PF00330 Aconitase family (aconitate hydratase) ND447_02750 PF00180 Isocitrate/isopropylmalate dehydrogenase ND447_02755 PF08502 LeuA allosteric (dimerisation) domain ND447_02755 PF00682 HMGL-like ND447_02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_02760 PF03466 LysR substrate binding domain ND447_02765 PF00501 AMP-binding enzyme ND447_02770 PF00205 Thiamine pyrophosphate enzyme, central domain ND447_02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND447_02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND447_02775 PF10369 Small subunit of acetolactate synthase ND447_02780 PF00356 Bacterial regulatory proteins, lacI family ND447_02780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND447_02785 PF06610 L-alanine exporter ND447_02790 PF02381 MraZ protein, putative antitoxin-like ND447_02795 PF01795 MraW methylase family ND447_02800 PF04999 Cell division protein FtsL ND447_02805 PF03717 Penicillin-binding Protein dimerisation domain ND447_02805 PF00905 Penicillin binding protein transpeptidase domain ND447_02810 PF02875 Mur ligase family, glutamate ligase domain ND447_02810 PF08245 Mur ligase middle domain ND447_02810 PF01225 Mur ligase family, catalytic domain ND447_02815 PF02875 Mur ligase family, glutamate ligase domain ND447_02815 PF08245 Mur ligase middle domain ND447_02815 PF01225 Mur ligase family, catalytic domain ND447_02820 PF00953 Glycosyl transferase family 4 ND447_02820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND447_02825 PF02875 Mur ligase family, glutamate ligase domain ND447_02825 PF08245 Mur ligase middle domain ND447_02830 PF01098 Cell cycle protein ND447_02835 PF03033 Glycosyltransferase family 28 N-terminal domain ND447_02835 PF04101 Glycosyltransferase family 28 C-terminal domain ND447_02840 PF01225 Mur ligase family, catalytic domain ND447_02840 PF08245 Mur ligase middle domain ND447_02840 PF02875 Mur ligase family, glutamate ligase domain ND447_02845 PF07478 D-ala D-ala ligase C-terminus ND447_02845 PF01820 D-ala D-ala ligase N-terminus ND447_02850 PF03799 Cell division protein FtsQ ND447_02850 PF08478 POTRA domain, FtsQ-type ND447_02855 PF02491 SHS2 domain inserted in FTSA ND447_02860 PF12327 FtsZ family, C-terminal domain ND447_02860 PF00091 Tubulin/FtsZ family, GTPase domain ND447_02865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND447_02875 PF06558 Secretion monitor precursor protein (SecM) ND447_02880 PF07517 SecA DEAD-like domain ND447_02880 PF01043 SecA preprotein cross-linking domain ND447_02880 PF07516 SecA Wing and Scaffold domain ND447_02880 PF02810 SEC-C motif ND447_02885 PF00293 NUDIX domain ND447_02890 PF03884 DNA gyrase inhibitor YacG ND447_02895 PF07072 Cell division protein ND447_02900 PF01121 Dephospho-CoA kinase ND447_02905 PF00478 IMP dehydrogenase / GMP reductase domain ND447_02910 PF00482 Type II secretion system (T2SS), protein F ND447_02915 PF00437 Type II/IV secretion system protein ND447_02915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND447_02920 PF07963 Prokaryotic N-terminal methylation motif ND447_02925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND447_02925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND447_02930 PF01510 N-acetylmuramoyl-L-alanine amidase ND447_02935 PF17113 Regulatory signalling modulator protein AmpE ND447_02940 PF00324 Amino acid permease ND447_02945 PF07729 FCD domain ND447_02945 PF00392 Bacterial regulatory proteins, gntR family ND447_02950 PF17831 Pyruvate dehydrogenase E1 component middle domain ND447_02950 PF00456 Transketolase, thiamine diphosphate binding domain ND447_02955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND447_02955 PF00364 Biotin-requiring enzyme ND447_02955 PF02817 e3 binding domain ND447_02960 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_02960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND447_02970 PF11791 Aconitate B N-terminal domain ND447_02970 PF00330 Aconitase family (aconitate hydratase) ND447_02970 PF06434 Aconitate hydratase 2 N-terminus ND447_02975 PF06062 Uncharacterised protein family (UPF0231) ND447_02980 PF00892 EamA-like transporter family ND447_02985 PF02675 S-adenosylmethionine decarboxylase ND447_02990 PF17284 Spermidine synthase tetramerisation domain ND447_02995 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND447_03000 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND447_03000 PF00394 Multicopper oxidase ND447_03000 PF07731 Multicopper oxidase ND447_03000 PF07732 Multicopper oxidase ND447_03005 PF00156 Phosphoribosyl transferase domain ND447_03010 PF00484 Carbonic anhydrase ND447_03015 PF00005 ABC transporter ND447_03020 PF01061 ABC-2 type transporter ND447_03025 PF01522 Polysaccharide deacetylase ND447_03030 PF02261 Aspartate decarboxylase ND447_03035 PF02569 Pantoate-beta-alanine ligase ND447_03040 PF02548 Ketopantoate hydroxymethyltransferase ND447_03045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND447_03050 PF12627 Probable RNA and SrmB- binding site of polymerase A ND447_03050 PF12626 Polymerase A arginine-rich C-terminus ND447_03050 PF01743 Poly A polymerase head domain ND447_03055 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND447_03060 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND447_03065 PF03749 Sugar fermentation stimulation protein RE domain ND447_03065 PF17746 SfsA N-terminal OB domain ND447_03070 PF02834 LigT like Phosphoesterase ND447_03075 PF00270 DEAD/DEAH box helicase ND447_03075 PF04408 Helicase associated domain (HA2) ND447_03075 PF00271 Helicase conserved C-terminal domain ND447_03075 PF08482 ATP-dependent helicase C-terminal ND447_03080 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND447_03080 PF00912 Transglycosylase ND447_03080 PF00905 Penicillin binding protein transpeptidase domain ND447_03080 PF14814 Bifunctional transglycosylase second domain ND447_03085 PF00202 Aminotransferase class-III ND447_03090 PF00654 Voltage gated chloride channel ND447_03095 PF01521 Iron-sulphur cluster biosynthesis ND447_03100 PF03458 UPF0126 domain ND447_03105 PF01497 Periplasmic binding protein ND447_03110 PF01048 Phosphorylase superfamily ND447_03115 PF13286 Phosphohydrolase-associated domain ND447_03115 PF01966 HD domain ND447_03120 PF00595 PDZ domain ND447_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_03125 PF00512 His Kinase A (phospho-acceptor) domain ND447_03125 PF01627 Hpt domain ND447_03125 PF00072 Response regulator receiver domain ND447_03125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND447_03125 PF00672 HAMP domain ND447_03130 PF01938 TRAM domain ND447_03130 PF05958 tRNA (Uracil-5-)-methyltransferase ND447_03135 PF13291 ACT domain ND447_03135 PF02824 TGS domain ND447_03135 PF04607 Region found in RelA / SpoT proteins ND447_03140 PF03819 MazG nucleotide pyrophosphohydrolase domain ND447_03145 PF00117 Glutamine amidotransferase class-I ND447_03145 PF06418 CTP synthase N-terminus ND447_03150 PF03952 Enolase, N-terminal domain ND447_03150 PF00113 Enolase, C-terminal TIM barrel domain ND447_03155 PF04055 Radical SAM superfamily ND447_03160 PF01242 6-pyruvoyl tetrahydropterin synthase ND447_03165 PF00175 Oxidoreductase NAD-binding domain ND447_03165 PF00258 Flavodoxin ND447_03165 PF00667 FAD binding domain ND447_03170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND447_03170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND447_03175 PF01507 Phosphoadenosine phosphosulfate reductase family ND447_03190 PF04389 Peptidase family M28 ND447_03195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND447_03195 PF10414 Sirohaem synthase dimerisation region ND447_03195 PF14824 Sirohaem biosynthesis protein central ND447_03200 PF01507 Phosphoadenosine phosphosulfate reductase family ND447_03205 PF00009 Elongation factor Tu GTP binding domain ND447_03215 PF12084 Protein of unknown function (DUF3561) ND447_03220 PF04977 Septum formation initiator ND447_03225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND447_03230 PF02542 YgbB family ND447_03235 PF01142 tRNA pseudouridine synthase D (TruD) ND447_03240 PF01975 Survival protein SurE ND447_03250 PF01476 LysM domain ND447_03250 PF01551 Peptidase family M23 ND447_03255 PF04545 Sigma-70, region 4 ND447_03255 PF04539 Sigma-70 region 3 ND447_03255 PF04542 Sigma-70 region 2 ND447_03255 PF00140 Sigma-70 factor, region 1.2 ND447_03260 PF01624 MutS domain I ND447_03260 PF05188 MutS domain II ND447_03260 PF05192 MutS domain III ND447_03260 PF05190 MutS family domain IV ND447_03260 PF00488 MutS domain V ND447_03295 PF13193 AMP-binding enzyme C-terminal domain ND447_03295 PF00668 Condensation domain ND447_03295 PF00550 Phosphopantetheine attachment site ND447_03295 PF00501 AMP-binding enzyme ND447_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_03330 PF00512 His Kinase A (phospho-acceptor) domain ND447_03330 PF09308 LuxQ, periplasmic ND447_03330 PF00072 Response regulator receiver domain ND447_03335 PF00196 Bacterial regulatory proteins, luxR family ND447_03335 PF00072 Response regulator receiver domain ND447_03350 PF01464 Transglycosylase SLT domain ND447_03370 PF01514 Secretory protein of YscJ/FliF family ND447_03390 PF12833 Helix-turn-helix domain ND447_03395 PF00263 Bacterial type II and III secretion system protein ND447_03395 PF03958 Bacterial type II/III secretion system short domain ND447_03400 PF07201 HrpJ-like domain ND447_03405 PF00771 FHIPEP family ND447_03415 PF18269 T3SS EscN ATPase C-terminal domain ND447_03415 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND447_03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND447_03430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND447_03435 PF00813 FliP family ND447_03440 PF01313 Bacterial export proteins, family 3 ND447_03445 PF01311 Bacterial export proteins, family 1 ND447_03450 PF01312 FlhB HrpN YscU SpaS Family ND447_03455 PF07720 Tetratricopeptide repeat ND447_03480 PF00550 Phosphopantetheine attachment site ND447_03500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND447_03500 PF18416 N-acetylglucosamine binding protein domain 2 ND447_03505 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND447_03510 PF06750 Bacterial Peptidase A24 N-terminal domain ND447_03510 PF01478 Type IV leader peptidase family ND447_03520 PF05134 Type II secretion system (T2SS), protein L ND447_03520 PF12693 GspL periplasmic domain ND447_03525 PF03934 Type II secretion system (T2SS), protein K ND447_03530 PF11612 Type II secretion system (T2SS), protein J ND447_03530 PF07963 Prokaryotic N-terminal methylation motif ND447_03535 PF07963 Prokaryotic N-terminal methylation motif ND447_03535 PF02501 Type II secretion system (T2SS), protein I ND447_03545 PF07963 Prokaryotic N-terminal methylation motif ND447_03545 PF08334 Type II secretion system (T2SS), protein G ND447_03550 PF00482 Type II secretion system (T2SS), protein F ND447_03555 PF00437 Type II/IV secretion system protein ND447_03560 PF03958 Bacterial type II/III secretion system short domain ND447_03560 PF00263 Bacterial type II and III secretion system protein ND447_03565 PF11356 Type II secretion system protein C ND447_03590 PF05681 Fumarate hydratase (Fumerase) ND447_03590 PF05683 Fumarase C-terminus ND447_03595 PF07690 Major Facilitator Superfamily ND447_03600 PF02464 Competence-damaged protein ND447_03605 PF00154 recA bacterial DNA recombination protein ND447_03610 PF02631 RecX family ND447_03615 PF01411 tRNA synthetases class II (A) ND447_03615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND447_03615 PF02272 DHHA1 domain ND447_03620 PF02599 Global regulator protein family ND447_03645 PF01411 tRNA synthetases class II (A) ND447_03645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND447_03650 PF13419 Haloacid dehalogenase-like hydrolase ND447_03655 PF09335 SNARE associated Golgi protein ND447_03660 PF04262 Glutamate-cysteine ligase ND447_03665 PF02664 S-Ribosylhomocysteinase (LuxS) ND447_03670 PF00571 CBS domain ND447_03670 PF01595 Cyclin M transmembrane N-terminal domain ND447_03670 PF03471 Transporter associated domain ND447_03675 PF01578 Cytochrome C assembly protein ND447_03680 PF00448 SRP54-type protein, GTPase domain ND447_03680 PF02881 SRP54-type protein, helical bundle domain ND447_03680 PF02978 Signal peptide binding domain ND447_03685 PF00886 Ribosomal protein S16 ND447_03690 PF05239 PRC-barrel domain ND447_03690 PF01782 RimM N-terminal domain ND447_03695 PF01746 tRNA (Guanine-1)-methyltransferase ND447_03700 PF01245 Ribosomal protein L19 ND447_03705 PF04338 Protein of unknown function, DUF481 ND447_03710 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND447_03715 PF00072 Response regulator receiver domain ND447_03715 PF04397 LytTr DNA-binding domain ND447_03720 PF00793 DAHP synthetase I family ND447_03725 PF01817 Chorismate mutase type II ND447_03725 PF02153 Prephenate dehydrogenase ND447_03730 PF01817 Chorismate mutase type II ND447_03730 PF00800 Prephenate dehydratase ND447_03740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND447_03745 PF13525 Outer membrane lipoprotein ND447_03750 PF01479 S4 domain ND447_03750 PF00849 RNA pseudouridylate synthase ND447_03755 PF02578 Multi-copper polyphenol oxidoreductase laccase ND447_03760 PF00004 ATPase family associated with various cellular activities (AAA) ND447_03760 PF07724 AAA domain (Cdc48 subfamily) ND447_03760 PF17871 AAA lid domain ND447_03760 PF02861 Clp amino terminal domain, pathogenicity island component ND447_03760 PF10431 C-terminal, D2-small domain, of ClpB protein ND447_03795 PF03372 Endonuclease/Exonuclease/phosphatase family ND447_03800 PF01476 LysM domain ND447_03800 PF01464 Transglycosylase SLT domain ND447_03805 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND447_03805 PF00753 Metallo-beta-lactamase superfamily ND447_03810 PF08241 Methyltransferase domain ND447_03815 PF00075 RNase H ND447_03820 PF00929 Exonuclease ND447_03830 PF09317 Domain of unknown function (DUF1974) ND447_03830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND447_03830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND447_03835 PF13580 SIS domain ND447_03840 PF13230 Glutamine amidotransferases class-II ND447_03845 PF03734 L,D-transpeptidase catalytic domain ND447_03850 PF11973 NQRA C-terminal domain ND447_03850 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ND447_03855 PF03116 NQR2, RnfD, RnfE family ND447_03860 PF04205 FMN-binding domain ND447_03865 PF02508 Rnf-Nqr subunit, membrane protein ND447_03870 PF02508 Rnf-Nqr subunit, membrane protein ND447_03875 PF00970 Oxidoreductase FAD-binding domain ND447_03875 PF00111 2Fe-2S iron-sulfur cluster binding domain ND447_03875 PF00175 Oxidoreductase NAD-binding domain ND447_03880 PF02424 ApbE family ND447_03885 PF04400 (Na+)-NQR maturation NqrM ND447_03890 PF03009 Glycerophosphoryl diester phosphodiesterase family ND447_03895 PF00817 impB/mucB/samB family ND447_03895 PF11799 impB/mucB/samB family C-terminal domain ND447_03895 PF11798 IMS family HHH motif ND447_03900 PF07687 Peptidase dimerisation domain ND447_03900 PF01546 Peptidase family M20/M25/M40 ND447_03905 PF00156 Phosphoribosyl transferase domain ND447_03910 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND447_03915 PF07417 Sigma factor-binding transcriptional regulator Crl ND447_03920 PF00696 Amino acid kinase family ND447_03920 PF01472 PUA domain ND447_03925 PF00171 Aldehyde dehydrogenase family ND447_03930 PF07238 PilZ domain ND447_03930 PF07317 Flagellar regulator YcgR ND447_03955 PF00593 TonB dependent receptor ND447_03955 PF07715 TonB-dependent Receptor Plug Domain ND447_03960 PF01202 Shikimate kinase ND447_03980 PF07302 AroM protein ND447_03985 PF06865 Pyrimidine/purine nucleoside phosphorylase ND447_03990 PF04381 Putative exonuclease, RdgC ND447_03995 PF00480 ROK family ND447_04000 PF13476 AAA domain ND447_04005 PF00149 Calcineurin-like phosphoesterase ND447_04005 PF12320 Type 5 capsule protein repressor C-terminal domain ND447_04010 PF00072 Response regulator receiver domain ND447_04010 PF00486 Transcriptional regulatory protein, C terminal ND447_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_04015 PF00989 PAS fold ND447_04015 PF11808 Phosphate regulon sensor protein PhoR ND447_04015 PF00512 His Kinase A (phospho-acceptor) domain ND447_04020 PF12849 PBP superfamily domain ND447_04025 PF05525 Branched-chain amino acid transport protein ND447_04030 PF00324 Amino acid permease ND447_04035 PF00128 Alpha amylase, catalytic domain ND447_04035 PF02903 Alpha amylase, N-terminal ig-like domain ND447_04045 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND447_04045 PF00578 AhpC/TSA family ND447_04050 PF04336 Acyl carrier protein phosphodiesterase ND447_04055 PF02547 Queuosine biosynthesis protein ND447_04060 PF01702 Queuine tRNA-ribosyltransferase ND447_04065 PF02699 Preprotein translocase subunit ND447_04070 PF02355 Protein export membrane protein ND447_04070 PF13721 SecD export protein N-terminal TM region ND447_04070 PF07549 SecD/SecF GG Motif ND447_04075 PF07549 SecD/SecF GG Motif ND447_04075 PF02355 Protein export membrane protein ND447_04080 PF03477 ATP cone domain ND447_04085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND447_04085 PF01872 RibD C-terminal domain ND447_04090 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND447_04095 PF01029 NusB family ND447_04100 PF02769 AIR synthase related protein, C-terminal domain ND447_04100 PF00586 AIR synthase related protein, N-terminal domain ND447_04105 PF04608 Phosphatidylglycerophosphatase A ND447_04110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND447_04110 PF02779 Transketolase, pyrimidine binding domain ND447_04110 PF02780 Transketolase, C-terminal domain ND447_04115 PF00348 Polyprenyl synthetase ND447_04120 PF02609 Exonuclease VII small subunit ND447_04125 PF02568 Thiamine biosynthesis protein (ThiI) ND447_04125 PF02926 THUMP domain ND447_04130 PF02954 Bacterial regulatory protein, Fis family ND447_04130 PF14532 Sigma-54 interaction domain ND447_04130 PF00072 Response regulator receiver domain ND447_04135 PF00672 HAMP domain ND447_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_04135 PF00512 His Kinase A (phospho-acceptor) domain ND447_04145 PF07690 Major Facilitator Superfamily ND447_04150 PF01965 DJ-1/PfpI family ND447_04155 PF02558 Ketopantoate reductase PanE/ApbA ND447_04155 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND447_04160 PF04461 Protein of unknown function (DUF520) ND447_04165 PF07690 Major Facilitator Superfamily ND447_04170 PF01040 UbiA prenyltransferase family ND447_04175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND447_04180 PF00510 Cytochrome c oxidase subunit III ND447_04185 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND447_04190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND447_04190 PF06481 COX Aromatic Rich Motif ND447_04195 PF03502 Nucleoside-specific channel-forming protein, Tsx ND447_04200 PF07690 Major Facilitator Superfamily ND447_04205 PF03923 Uncharacterized lipoprotein ND447_04205 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND447_04210 PF01722 BolA-like protein ND447_04215 PF05698 Bacterial trigger factor protein (TF) C-terminus ND447_04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND447_04215 PF05697 Bacterial trigger factor protein (TF) ND447_04220 PF00574 Clp protease ND447_04225 PF06689 ClpX C4-type zinc finger ND447_04225 PF07724 AAA domain (Cdc48 subfamily) ND447_04225 PF10431 C-terminal, D2-small domain, of ClpB protein ND447_04230 PF00004 ATPase family associated with various cellular activities (AAA) ND447_04230 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND447_04230 PF05362 Lon protease (S16) C-terminal proteolytic domain ND447_04235 PF00216 Bacterial DNA-binding protein ND447_04240 PF13145 PPIC-type PPIASE domain ND447_04255 PF06508 Queuosine biosynthesis protein QueC ND447_04260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_04260 PF12793 Sugar transport-related sRNA regulator N-term ND447_04275 PF01037 Lrp/AsnC ligand binding domain ND447_04275 PF13404 AsnC-type helix-turn-helix domain ND447_04280 PF00664 ABC transporter transmembrane region ND447_04280 PF00005 ABC transporter ND447_04285 PF00664 ABC transporter transmembrane region ND447_04285 PF00005 ABC transporter ND447_04290 PF00543 Nitrogen regulatory protein P-II ND447_04295 PF00909 Ammonium Transporter Family ND447_04305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND447_04315 PF05321 Haemolysin expression modulating protein ND447_04320 PF10757 Biofilm formation regulator YbaJ ND447_04330 PF00444 Ribosomal protein L36 ND447_04335 PF01197 Ribosomal protein L31 ND447_04340 PF00873 AcrB/AcrD/AcrF family ND447_04345 PF00529 HlyD membrane-fusion protein of T1SS ND447_04345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND447_04350 PF08361 MAATS-type transcriptional repressor, C-terminal region ND447_04350 PF00440 Bacterial regulatory proteins, tetR family ND447_04355 PF02635 DsrE/DsrF-like family ND447_04360 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND447_04360 PF12795 Mechanosensitive ion channel porin domain ND447_04360 PF00924 Mechanosensitive ion channel ND447_04365 PF10689 Protein of unknown function (DUF2496) ND447_04375 PF04304 Protein of unknown function (DUF454) ND447_04380 PF00156 Phosphoribosyl transferase domain ND447_04385 PF01970 Tripartite tricarboxylate transporter TctA family ND447_04400 PF00072 Response regulator receiver domain ND447_04400 PF00486 Transcriptional regulatory protein, C terminal ND447_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_04405 PF00512 His Kinase A (phospho-acceptor) domain ND447_04410 PF12170 DNA polymerase III tau subunit V interacting with alpha ND447_04410 PF12169 DNA polymerase III subunits gamma and tau domain III ND447_04410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND447_04415 PF02575 YbaB/EbfC DNA-binding family ND447_04420 PF13662 Toprim domain ND447_04420 PF02132 RecR protein ND447_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_04425 PF00183 Hsp90 protein ND447_04430 PF05191 Adenylate kinase, active site lid ND447_04435 PF00762 Ferrochelatase ND447_04440 PF02706 Chain length determinant protein ND447_04445 PF00294 pfkB family carbohydrate kinase ND447_04450 PF00999 Sodium/hydrogen exchanger family ND447_04450 PF02254 TrkA-N domain ND447_04455 PF02872 5'-nucleotidase, C-terminal domain ND447_04455 PF00149 Calcineurin-like phosphoesterase ND447_04460 PF04073 Aminoacyl-tRNA editing domain ND447_04465 PF01963 TraB family ND447_04470 PF00403 Heavy-metal-associated domain ND447_04475 PF13411 MerR HTH family regulatory protein ND447_04480 PF01957 NfeD-like C-terminal, partner-binding ND447_04485 PF16200 C-terminal region of band_7 ND447_04485 PF01145 SPFH domain / Band 7 family ND447_04490 PF00085 Thioredoxin ND447_04495 PF00106 short chain dehydrogenase ND447_04500 PF13472 GDSL-like Lipase/Acylhydrolase family ND447_04505 PF00005 ABC transporter ND447_04515 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND447_04515 PF02222 ATP-grasp domain ND447_04520 PF00731 AIR carboxylase ND447_04525 PF00149 Calcineurin-like phosphoesterase ND447_04530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND447_04535 PF09190 DALR domain ND447_04535 PF01406 tRNA synthetases class I (C) catalytic domain ND447_04550 PF00419 Fimbrial protein ND447_04555 PF13953 PapC C-terminal domain ND447_04555 PF13954 PapC N-terminal domain ND447_04555 PF00577 Outer membrane usher protein ND447_04560 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_04560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_04595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND447_04595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND447_04605 PF01022 Bacterial regulatory protein, arsR family ND447_04610 PF02040 Arsenical pump membrane protein ND447_04615 PF03960 ArsC family ND447_04625 PF00501 AMP-binding enzyme ND447_04650 PF01292 Prokaryotic cytochrome b561 ND447_04660 PF00343 Carbohydrate phosphorylase ND447_04670 PF00486 Transcriptional regulatory protein, C terminal ND447_04670 PF00072 Response regulator receiver domain ND447_04680 PF00483 Nucleotidyl transferase ND447_04690 PF07238 PilZ domain ND447_04690 PF00535 Glycosyl transferase family 2 ND447_04690 PF03552 Cellulose synthase ND447_04710 PF16355 Domain of unknown function (DUF4982) ND447_04710 PF00703 Glycosyl hydrolases family 2 ND447_04710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND447_04710 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND447_04715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND447_04715 PF00072 Response regulator receiver domain ND447_04715 PF00512 His Kinase A (phospho-acceptor) domain ND447_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_04715 PF01627 Hpt domain ND447_04715 PF00672 HAMP domain ND447_04720 PF00072 Response regulator receiver domain ND447_04720 PF00990 Diguanylate cyclase, GGDEF domain ND447_04725 PF00440 Bacterial regulatory proteins, tetR family ND447_04755 PF00196 Bacterial regulatory proteins, luxR family ND447_04760 PF00313 'Cold-shock' DNA-binding domain ND447_04765 PF00313 'Cold-shock' DNA-binding domain ND447_04770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND447_04780 PF05230 MASE2 domain ND447_04780 PF00990 Diguanylate cyclase, GGDEF domain ND447_04785 PF02416 mttA/Hcf106 family ND447_04790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND447_04790 PF04055 Radical SAM superfamily ND447_04795 PF03099 Biotin/lipoate A/B protein ligase family ND447_04800 PF04359 Protein of unknown function (DUF493) ND447_04805 PF00768 D-alanyl-D-alanine carboxypeptidase ND447_04805 PF07943 Penicillin-binding protein 5, C-terminal domain ND447_04810 PF05036 Sporulation related domain ND447_04810 PF03330 Lytic transglycolase ND447_04815 PF01098 Cell cycle protein ND447_04820 PF03717 Penicillin-binding Protein dimerisation domain ND447_04820 PF00905 Penicillin binding protein transpeptidase domain ND447_04825 PF02590 Predicted SPOUT methyltransferase ND447_04835 PF01467 Cytidylyltransferase-like ND447_04840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND447_04840 PF06144 DNA polymerase III, delta subunit ND447_04845 PF04390 Lipopolysaccharide-assembly ND447_04850 PF08264 Anticodon-binding domain of tRNA ND447_04850 PF00133 tRNA synthetases class I (I, L, M and V) ND447_04850 PF13603 Leucyl-tRNA synthetase, Domain 2 ND447_04855 PF07295 Zinc-ribbon containing domain ND447_04860 PF00005 ABC transporter ND447_04865 PF00528 Binding-protein-dependent transport system inner membrane component ND447_04870 PF00528 Binding-protein-dependent transport system inner membrane component ND447_04875 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_04880 PF00795 Carbon-nitrogen hydrolase ND447_04885 PF00571 CBS domain ND447_04885 PF03471 Transporter associated domain ND447_04890 PF02130 Uncharacterized protein family UPF0054 ND447_04895 PF02562 PhoH-like protein ND447_04900 PF04055 Radical SAM superfamily ND447_04900 PF01938 TRAM domain ND447_04900 PF00919 Uncharacterized protein family UPF0004 ND447_04905 PF01494 FAD binding domain ND447_04940 PF00733 Asparagine synthase ND447_04940 PF13537 Glutamine amidotransferase domain ND447_04945 PF13344 Haloacid dehalogenase-like hydrolase ND447_04950 PF01047 MarR family ND447_04950 PF00480 ROK family ND447_04955 PF01979 Amidohydrolase family ND447_04960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND447_04965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND447_04965 PF00367 phosphotransferase system, EIIB ND447_04965 PF02378 Phosphotransferase system, EIIC ND447_04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND447_04970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND447_04975 PF03573 outer membrane porin, OprD family ND447_04980 PF13982 YbfN-like lipoprotein ND447_04985 PF02838 Glycosyl hydrolase family 20, domain 2 ND447_04985 PF00728 Glycosyl hydrolase family 20, catalytic domain ND447_04985 PF03173 Putative carbohydrate binding domain ND447_04985 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ND447_04990 PF01475 Ferric uptake regulator family ND447_04995 PF00258 Flavodoxin ND447_05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_05000 PF00672 HAMP domain ND447_05000 PF02203 Tar ligand binding domain homologue ND447_05005 PF01402 Ribbon-helix-helix protein, copG family ND447_05010 PF12697 Alpha/beta hydrolase family ND447_05015 PF17206 SeqA protein N-terminal domain ND447_05015 PF03925 SeqA protein C-terminal domain ND447_05020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND447_05020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND447_05020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND447_05020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND447_05030 PF00072 Response regulator receiver domain ND447_05030 PF00486 Transcriptional regulatory protein, C terminal ND447_05035 PF13493 Domain of unknown function (DUF4118) ND447_05035 PF13492 GAF domain ND447_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_05035 PF00512 His Kinase A (phospho-acceptor) domain ND447_05035 PF02702 Osmosensitive K+ channel His kinase sensor domain ND447_05040 PF02669 K+-transporting ATPase, c chain ND447_05050 PF03814 Potassium-transporting ATPase A subunit ND447_05055 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND447_05060 PF10725 Protein of unknown function (DUF2517) ND447_05065 PF08349 Protein of unknown function (DUF1722) ND447_05070 PF03441 FAD binding domain of DNA photolyase ND447_05070 PF00875 DNA photolyase ND447_05075 PF02112 cAMP phosphodiesterases class-II ND447_05080 PF01784 NIF3 (NGG1p interacting factor 3) ND447_05085 PF02682 Carboxyltransferase domain, subdomain C and D ND447_05090 PF02626 Carboxyltransferase domain, subdomain A and B ND447_05095 PF03746 LamB/YcsF family ND447_05110 PF01470 Pyroglutamyl peptidase ND447_05120 PF00285 Citrate synthase, C-terminal domain ND447_05125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND447_05130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND447_05135 PF00890 FAD binding domain ND447_05135 PF02910 Fumarate reductase flavoprotein C-term ND447_05140 PF13085 2Fe-2S iron-sulfur cluster binding domain ND447_05145 PF16078 2-oxoglutarate dehydrogenase N-terminus ND447_05145 PF00676 Dehydrogenase E1 component ND447_05145 PF16870 2-oxoglutarate dehydrogenase C-terminal ND447_05145 PF02779 Transketolase, pyrimidine binding domain ND447_05150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND447_05150 PF00364 Biotin-requiring enzyme ND447_05150 PF02817 e3 binding domain ND447_05155 PF08442 ATP-grasp domain ND447_05155 PF00549 CoA-ligase ND447_05160 PF00549 CoA-ligase ND447_05160 PF02629 CoA binding domain ND447_05165 PF02872 5'-nucleotidase, C-terminal domain ND447_05165 PF00149 Calcineurin-like phosphoesterase ND447_05170 PF01654 Cytochrome bd terminal oxidase subunit I ND447_05175 PF02322 Cytochrome bd terminal oxidase subunit II ND447_05180 PF08173 Membrane bound YbgT-like protein ND447_05185 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND447_05190 PF03061 Thioesterase superfamily ND447_05195 PF01618 MotA/TolQ/ExbB proton channel family ND447_05200 PF02472 Biopolymer transport protein ExbD/TolR ND447_05205 PF06519 TolA C-terminal ND447_05205 PF06519 TolA C-terminal ND447_05210 PF04052 TolB amino-terminal domain ND447_05210 PF07676 WD40-like Beta Propeller Repeat ND447_05215 PF00691 OmpA family ND447_05220 PF13174 Tetratricopeptide repeat ND447_05220 PF16331 TolA binding protein trimerisation ND447_05250 PF02445 Quinolinate synthetase A protein ND447_05255 PF04973 Nicotinamide mononucleotide transporter ND447_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_05260 PF01627 Hpt domain ND447_05260 PF00989 PAS fold ND447_05260 PF00072 Response regulator receiver domain ND447_05260 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_05260 PF00512 His Kinase A (phospho-acceptor) domain ND447_05265 PF00196 Bacterial regulatory proteins, luxR family ND447_05265 PF00072 Response regulator receiver domain ND447_05270 PF00793 DAHP synthetase I family ND447_05275 PF00300 Histidine phosphatase superfamily (branch 1) ND447_05285 PF01263 Aldose 1-epimerase ND447_05290 PF08544 GHMP kinases C terminal ND447_05290 PF00288 GHMP kinases N terminal domain ND447_05290 PF10509 Galactokinase galactose-binding signature ND447_05295 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND447_05295 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND447_05300 PF16363 GDP-mannose 4,6 dehydratase ND447_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_05315 PF03459 TOBE domain ND447_05320 PF10766 Multidrug efflux pump-associated protein AcrZ ND447_05330 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05335 PF00005 ABC transporter ND447_05335 PF03459 TOBE domain ND447_05345 PF10282 Lactonase, 7-bladed beta-propeller ND447_05350 PF00202 Aminotransferase class-III ND447_05355 PF06968 Biotin and Thiamin Synthesis associated domain ND447_05355 PF04055 Radical SAM superfamily ND447_05360 PF00155 Aminotransferase class I and II ND447_05365 PF08241 Methyltransferase domain ND447_05375 PF00005 ABC transporter ND447_05380 PF00271 Helicase conserved C-terminal domain ND447_05380 PF17757 UvrB interaction domain ND447_05380 PF04851 Type III restriction enzyme, res subunit ND447_05380 PF02151 UvrB/uvrC motif ND447_05380 PF12344 Ultra-violet resistance protein B ND447_05385 PF09905 DNA-binding protein VF530 ND447_05400 PF01032 FecCD transport family ND447_05405 PF00005 ABC transporter ND447_05410 PF01933 Uncharacterised protein family UPF0052 ND447_05415 PF04055 Radical SAM superfamily ND447_05415 PF06463 Molybdenum Cofactor Synthesis C ND447_05420 PF01967 MoaC family ND447_05425 PF02597 ThiS family ND447_05430 PF02391 MoaE protein ND447_05435 PF01027 Inhibitor of apoptosis-promoting Bax1 ND447_05450 PF00005 ABC transporter ND447_05455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND447_05460 PF00440 Bacterial regulatory proteins, tetR family ND447_05460 PF09209 Tetracyclin repressor-like, C-terminal domain ND447_05465 PF00271 Helicase conserved C-terminal domain ND447_05465 PF00270 DEAD/DEAH box helicase ND447_05470 PF01207 Dihydrouridine synthase (Dus) ND447_05480 PF00768 D-alanyl-D-alanine carboxypeptidase ND447_05485 PF01565 FAD binding domain ND447_05485 PF09330 D-lactate dehydrogenase, membrane binding ND447_05490 PF01928 CYTH domain ND447_05495 PF01844 HNH endonuclease ND447_05505 PF04226 Transglycosylase associated protein ND447_05510 PF00005 ABC transporter ND447_05520 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05525 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05530 PF07308 Protein of unknown function (DUF1456) ND447_05535 PF00581 Rhodanese-like domain ND447_05540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND447_05545 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05550 PF00005 ABC transporter ND447_05555 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05560 PF13520 Amino acid permease ND447_05565 PF01276 Orn/Lys/Arg decarboxylase, major domain ND447_05565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND447_05565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND447_05575 PF00892 EamA-like transporter family ND447_05580 PF00267 Gram-negative porin ND447_05585 PF06733 DEAD_2 ND447_05585 PF13307 Helicase C-terminal domain ND447_05590 PF02885 Glycosyl transferase family, helical bundle domain ND447_05595 PF05971 RNA methyltransferase ND447_05600 PF00005 ABC transporter ND447_05605 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05610 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_05615 PF00210 Ferritin-like domain ND447_05620 PF13649 Methyltransferase domain ND447_05625 PF00892 EamA-like transporter family ND447_05630 PF13505 Outer membrane protein beta-barrel domain ND447_05635 PF00571 CBS domain ND447_05635 PF01769 Divalent cation transporter ND447_05635 PF03448 MgtE intracellular N domain ND447_05640 PF16916 Dimerisation domain of Zinc Transporter ND447_05640 PF01545 Cation efflux family ND447_05645 PF12848 ABC transporter ND447_05645 PF00005 ABC transporter ND447_05650 PF00899 ThiF family ND447_05655 PF00994 Probable molybdopterin binding domain ND447_05655 PF03454 MoeA C-terminal region (domain IV) ND447_05655 PF03453 MoeA N-terminal region (domain I and II) ND447_05665 PF00756 Putative esterase ND447_05670 PF08240 Alcohol dehydrogenase GroES-like domain ND447_05670 PF00107 Zinc-binding dehydrogenase ND447_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_05675 PF03466 LysR substrate binding domain ND447_05680 PF06779 Uncharacterised MFS-type transporter YbfB ND447_05685 PF01227 GTP cyclohydrolase I ND447_05690 PF04235 Protein of unknown function (DUF418) ND447_05695 PF00356 Bacterial regulatory proteins, lacI family ND447_05700 PF13407 Periplasmic binding protein domain ND447_05705 PF00005 ABC transporter ND447_05710 PF02653 Branched-chain amino acid transport system / permease component ND447_05715 PF02698 DUF218 domain ND447_05720 PF00390 Malic enzyme, N-terminal domain ND447_05720 PF03949 Malic enzyme, NAD binding domain ND447_05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_05730 PF03466 LysR substrate binding domain ND447_05735 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND447_05735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND447_05740 PF04172 LrgB-like family ND447_05745 PF03788 LrgA family ND447_05755 PF01588 Putative tRNA binding domain ND447_05755 PF09334 tRNA synthetases class I (M) ND447_05760 PF10609 NUBPL iron-transfer P-loop NTPase ND447_05765 PF00485 Phosphoribulokinase / Uridine kinase family ND447_05770 PF00692 dUTPase ND447_05775 PF05170 AsmA family ND447_05780 PF03606 C4-dicarboxylate anaerobic carrier ND447_05785 PF03741 Integral membrane protein TerC family ND447_05785 PF03471 Transporter associated domain ND447_05785 PF00571 CBS domain ND447_05790 PF00483 Nucleotidyl transferase ND447_05795 PF00483 Nucleotidyl transferase ND447_05800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND447_05800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND447_05810 PF01502 Phosphoribosyl-AMP cyclohydrolase ND447_05810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND447_05815 PF00977 Histidine biosynthesis protein ND447_05820 PF00977 Histidine biosynthesis protein ND447_05825 PF00117 Glutamine amidotransferase class-I ND447_05830 PF00475 Imidazoleglycerol-phosphate dehydratase ND447_05835 PF00155 Aminotransferase class I and II ND447_05840 PF00815 Histidinol dehydrogenase ND447_05845 PF01634 ATP phosphoribosyltransferase ND447_05845 PF08029 HisG, C-terminal domain ND447_05855 PF01370 NAD dependent epimerase/dehydratase family ND447_05860 PF00043 Glutathione S-transferase, C-terminal domain ND447_05860 PF13417 Glutathione S-transferase, N-terminal domain ND447_05875 PF01053 Cys/Met metabolism PLP-dependent enzyme ND447_05880 PF00571 CBS domain ND447_05880 PF00291 Pyridoxal-phosphate dependent enzyme ND447_05885 PF07943 Penicillin-binding protein 5, C-terminal domain ND447_05885 PF00768 D-alanyl-D-alanine carboxypeptidase ND447_05890 PF03313 Serine dehydratase alpha chain ND447_05890 PF03315 Serine dehydratase beta chain ND447_05900 PF00455 DeoR C terminal sensor domain ND447_05900 PF08220 DeoR-like helix-turn-helix domain ND447_05905 PF01791 DeoC/LacD family aldolase ND447_05910 PF01569 PAP2 superfamily ND447_05920 PF02080 TrkA-C domain ND447_05920 PF06826 Predicted Permease Membrane Region ND447_05925 PF00462 Glutaredoxin ND447_05930 PF07214 Protein of unknown function (DUF1418) ND447_05935 PF10722 Putative bacterial sensory transduction regulator ND447_05940 PF13416 Bacterial extracellular solute-binding protein ND447_05945 PF00005 ABC transporter ND447_05945 PF08402 TOBE domain ND447_05950 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05955 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05960 PF10767 Protein of unknown function (DUF2593) ND447_05965 PF05958 tRNA (Uracil-5-)-methyltransferase ND447_05970 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_05975 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05980 PF00528 Binding-protein-dependent transport system inner membrane component ND447_05985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_05990 PF00005 ABC transporter ND447_05995 PF12883 Protein of unknown function (DUF3828) ND447_06000 PF01906 Putative heavy-metal-binding ND447_06005 PF01370 NAD dependent epimerase/dehydratase family ND447_06010 PF11066 Protein of unknown function (DUF2867) ND447_06010 PF13460 NAD(P)H-binding ND447_06015 PF01212 Beta-eliminating lyase ND447_06020 PF00175 Oxidoreductase NAD-binding domain ND447_06020 PF00111 2Fe-2S iron-sulfur cluster binding domain ND447_06020 PF00970 Oxidoreductase FAD-binding domain ND447_06025 PF03063 Prismane/CO dehydrogenase family ND447_06030 PF03956 Lysine exporter LysO ND447_06035 PF11398 Protein of unknown function (DUF2813) ND447_06040 PF04393 Protein of unknown function (DUF535) ND447_06045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND447_06050 PF02687 FtsX-like permease family ND447_06050 PF00005 ABC transporter ND447_06050 PF12704 MacB-like periplasmic core domain ND447_06055 PF00313 'Cold-shock' DNA-binding domain ND447_06060 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND447_06065 PF10431 C-terminal, D2-small domain, of ClpB protein ND447_06065 PF02861 Clp amino terminal domain, pathogenicity island component ND447_06065 PF17871 AAA lid domain ND447_06065 PF07724 AAA domain (Cdc48 subfamily) ND447_06065 PF00004 ATPase family associated with various cellular activities (AAA) ND447_06070 PF01176 Translation initiation factor 1A / IF-1 ND447_06075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND447_06080 PF00005 ABC transporter ND447_06080 PF00664 ABC transporter transmembrane region ND447_06085 PF00664 ABC transporter transmembrane region ND447_06085 PF00005 ABC transporter ND447_06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_06095 PF01037 Lrp/AsnC ligand binding domain ND447_06100 PF17854 FtsK alpha domain ND447_06100 PF09397 Ftsk gamma domain ND447_06100 PF01580 FtsK/SpoIIIE family ND447_06100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND447_06105 PF03548 Outer membrane lipoprotein carrier protein LolA ND447_06110 PF00004 ATPase family associated with various cellular activities (AAA) ND447_06110 PF16193 AAA C-terminal domain ND447_06110 PF12002 MgsA AAA+ ATPase C terminal ND447_06115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND447_06115 PF02403 Seryl-tRNA synthetase N-terminal domain ND447_06120 PF07690 Major Facilitator Superfamily ND447_06125 PF04055 Radical SAM superfamily ND447_06130 PF01228 Glycine radical ND447_06130 PF02901 Pyruvate formate lyase-like ND447_06135 PF01226 Formate/nitrite transporter ND447_06140 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND447_06140 PF18381 YcaO cyclodehydratase C-terminal domain ND447_06145 PF00710 Asparaginase, N-terminal ND447_06145 PF17763 Glutaminase/Asparaginase C-terminal domain ND447_06150 PF00266 Aminotransferase class-V ND447_06155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND447_06160 PF02224 Cytidylate kinase ND447_06165 PF00575 S1 RNA binding domain ND447_06170 PF00216 Bacterial DNA-binding protein ND447_06175 PF03772 Competence protein ND447_06175 PF00753 Metallo-beta-lactamase superfamily ND447_06180 PF00664 ABC transporter transmembrane region ND447_06180 PF00005 ABC transporter ND447_06185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND447_06190 PF07063 Domain of unknown function (DUF1338) ND447_06195 PF00313 'Cold-shock' DNA-binding domain ND447_06200 PF00313 'Cold-shock' DNA-binding domain ND447_06205 PF03966 Trm112p-like protein ND447_06210 PF02348 Cytidylyltransferase ND447_06215 PF01636 Phosphotransferase enzyme family ND447_06220 PF02698 DUF218 domain ND447_06225 PF13847 Methyltransferase domain ND447_06230 PF17192 MukF middle domain ND447_06230 PF03882 MukF winged-helix domain ND447_06230 PF17193 MukF C-terminal domain ND447_06235 PF04288 MukE-like family ND447_06240 PF04310 MukB N-terminal ND447_06240 PF16330 MukB hinge domain ND447_06245 PF01471 Putative peptidoglycan binding domain ND447_06245 PF03734 L,D-transpeptidase catalytic domain ND447_06250 PF05951 Bacterial protein of unknown function (DUF882) ND447_06255 PF00753 Metallo-beta-lactamase superfamily ND447_06260 PF00155 Aminotransferase class I and II ND447_06265 PF00267 Gram-negative porin ND447_06270 PF01336 OB-fold nucleic acid binding domain ND447_06270 PF00152 tRNA synthetases class II (D, K and N) ND447_06275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND447_06275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND447_06280 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND447_06280 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND447_06280 PF01433 Peptidase family M1 domain ND447_06285 PF01180 Dihydroorotate dehydrogenase ND447_06290 PF07126 Cell-division protein ZapC ND447_06295 PF00111 2Fe-2S iron-sulfur cluster binding domain ND447_06295 PF03473 MOSC domain ND447_06295 PF03476 MOSC N-terminal beta barrel domain ND447_06300 PF02926 THUMP domain ND447_06300 PF01170 Putative RNA methylase family UPF0020 ND447_06300 PF10672 S-adenosylmethionine-dependent methyltransferase ND447_06305 PF16326 ABC transporter C-terminal domain ND447_06305 PF00005 ABC transporter ND447_06305 PF12848 ABC transporter ND447_06310 PF04403 Paraquat-inducible protein A ND447_06315 PF02470 MlaD protein ND447_06320 PF03886 ABC-type transport auxiliary lipoprotein component ND447_06325 PF04957 Ribosome modulation factor ND447_06330 PF07977 FabA-like domain ND447_06335 PF13654 AAA domain ND447_06335 PF05362 Lon protease (S16) C-terminal proteolytic domain ND447_06340 PF06303 MatP N-terminal domain ND447_06340 PF17414 MatP C-terminal ribbon-helix-helix domain ND447_06345 PF00691 OmpA family ND447_06345 PF01389 OmpA-like transmembrane domain ND447_06350 PF03846 Cell division inhibitor SulA ND447_06355 PF04994 TfoX C-terminal domain ND447_06355 PF04993 TfoX N-terminal domain ND447_06360 PF12805 FUSC-like inner membrane protein yccS ND447_06365 PF03733 Inner membrane component domain ND447_06370 PF12462 DNA helicase IV / RNA helicase N terminal ND447_06370 PF00580 UvrD/REP helicase N-terminal domain ND447_06370 PF13361 UvrD-like helicase C-terminal domain ND447_06375 PF02142 MGS-like domain ND447_06380 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND447_06385 PF13380 CoA binding domain ND447_06390 PF08755 Hemimethylated DNA-binding protein YccV like ND447_06395 PF10672 S-adenosylmethionine-dependent methyltransferase ND447_06395 PF17785 PUA-like domain ND447_06400 PF00708 Acylphosphatase ND447_06405 PF04358 DsrC like protein ND447_06415 PF00484 Carbonic anhydrase ND447_06420 PF02080 TrkA-C domain ND447_06420 PF00999 Sodium/hydrogen exchanger family ND447_06420 PF03471 Transporter associated domain ND447_06430 PF01757 Acyltransferase family ND447_06435 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND447_06440 PF00535 Glycosyl transferase family 2 ND447_06450 PF01797 Transposase IS200 like ND447_06455 PF07282 Putative transposase DNA-binding domain ND447_06455 PF12323 Helix-turn-helix domain ND447_06455 PF01385 Probable transposase ND447_06460 PF00854 POT family ND447_06470 PF03279 Bacterial lipid A biosynthesis acyltransferase ND447_06475 PF17773 UPF0176 acylphosphatase like domain ND447_06475 PF12368 Rhodanase C-terminal ND447_06475 PF00581 Rhodanese-like domain ND447_06480 PF01594 AI-2E family transporter ND447_06485 PF00196 Bacterial regulatory proteins, luxR family ND447_06490 PF01266 FAD dependent oxidoreductase ND447_06495 PF13991 BssS protein family ND447_06500 PF06183 DinI-like family ND447_06505 PF01979 Amidohydrolase family ND447_06510 PF03992 Antibiotic biosynthesis monooxygenase ND447_06520 PF12111 Polyribonucleotide phosphorylase C terminal ND447_06520 PF10150 Ribonuclease E/G family ND447_06520 PF00575 S1 RNA binding domain ND447_06525 PF00849 RNA pseudouridylate synthase ND447_06525 PF01479 S4 domain ND447_06530 PF02545 Maf-like protein ND447_06535 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND447_06540 PF01783 Ribosomal L32p protein family ND447_06545 PF02504 Fatty acid synthesis protein ND447_06550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND447_06550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND447_06555 PF00698 Acyl transferase domain ND447_06565 PF00550 Phosphopantetheine attachment site ND447_06570 PF02801 Beta-ketoacyl synthase, C-terminal domain ND447_06570 PF00109 Beta-ketoacyl synthase, N-terminal domain ND447_06575 PF01063 Amino-transferase class IV ND447_06580 PF02618 YceG-like family ND447_06585 PF02223 Thymidylate kinase ND447_06590 PF09115 DNA polymerase III, delta subunit, C terminal ND447_06595 PF01026 TatD related DNase ND447_06600 PF00367 phosphotransferase system, EIIB ND447_06600 PF02378 Phosphotransferase system, EIIC ND447_06605 PF01230 HIT domain ND447_06610 PF07233 Protein of unknown function (DUF1425) ND447_06615 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND447_06615 PF13036 Peptidoglycan-synthase activator LpoB ND447_06620 PF01636 Phosphotransferase enzyme family ND447_06625 PF00933 Glycosyl hydrolase family 3 N terminal domain ND447_06630 PF05728 Uncharacterised protein family (UPF0227) ND447_06635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_06640 PF05433 Glycine zipper 2TM domain ND447_06645 PF02559 CarD-like/TRCF domain ND447_06645 PF00270 DEAD/DEAH box helicase ND447_06645 PF00271 Helicase conserved C-terminal domain ND447_06645 PF03461 TRCF domain ND447_06645 PF17757 UvrB interaction domain ND447_06650 PF02687 FtsX-like permease family ND447_06650 PF12704 MacB-like periplasmic core domain ND447_06655 PF00005 ABC transporter ND447_06660 PF02687 FtsX-like permease family ND447_06660 PF12704 MacB-like periplasmic core domain ND447_06665 PF00480 ROK family ND447_06670 PF02146 Sir2 family ND447_06675 PF01546 Peptidase family M20/M25/M40 ND447_06675 PF07687 Peptidase dimerisation domain ND447_06680 PF08007 Cupin superfamily protein ND447_06685 PF08918 PhoQ Sensor ND447_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_06690 PF00486 Transcriptional regulatory protein, C terminal ND447_06690 PF00072 Response regulator receiver domain ND447_06700 PF00206 Lyase ND447_06700 PF08328 Adenylosuccinate lyase C-terminal ND447_06705 PF04356 Protein of unknown function (DUF489) ND447_06715 PF00293 NUDIX domain ND447_06720 PF00849 RNA pseudouridylate synthase ND447_06725 PF00180 Isocitrate/isopropylmalate dehydrogenase ND447_06730 PF00196 Bacterial regulatory proteins, luxR family ND447_06730 PF03472 Autoinducer binding domain ND447_06735 PF00765 Autoinducer synthase ND447_06740 PF00232 Glycosyl hydrolase family 1 ND447_06750 PF01432 Peptidase family M3 ND447_06755 PF00672 HAMP domain ND447_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_06755 PF02203 Tar ligand binding domain homologue ND447_06775 PF01797 Transposase IS200 like ND447_06780 PF12323 Helix-turn-helix domain ND447_06780 PF01385 Probable transposase ND447_06780 PF07282 Putative transposase DNA-binding domain ND447_06790 PF00072 Response regulator receiver domain ND447_06795 PF17203 Single cache domain 3 ND447_06795 PF00989 PAS fold ND447_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_06795 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND447_06800 PF00939 Sodium:sulfate symporter transmembrane region ND447_06805 PF00413 Matrixin ND447_06805 PF08548 Peptidase M10 serralysin C terminal ND447_06805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND447_06810 PF02974 Protease inhibitor Inh ND447_06815 PF00005 ABC transporter ND447_06815 PF00664 ABC transporter transmembrane region ND447_06820 PF00529 HlyD membrane-fusion protein of T1SS ND447_06825 PF02321 Outer membrane efflux protein ND447_06840 PF12833 Helix-turn-helix domain ND447_06840 PF02311 AraC-like ligand binding domain ND447_06845 PF02562 PhoH-like protein ND447_06850 PF01699 Sodium/calcium exchanger protein ND447_06855 PF08021 Siderophore-interacting FAD-binding domain ND447_06855 PF04954 Siderophore-interacting protein ND447_06860 PF00672 HAMP domain ND447_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_06860 PF07730 Histidine kinase ND447_06860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND447_06870 PF02322 Cytochrome bd terminal oxidase subunit II ND447_06875 PF01654 Cytochrome bd terminal oxidase subunit I ND447_06880 PF00155 Aminotransferase class I and II ND447_06880 PF00392 Bacterial regulatory proteins, gntR family ND447_06885 PF00202 Aminotransferase class-III ND447_06890 PF04958 Arginine N-succinyltransferase beta subunit ND447_06895 PF00171 Aldehyde dehydrogenase family ND447_06900 PF04996 Succinylarginine dihydrolase ND447_06910 PF00267 Gram-negative porin ND447_06920 PF01979 Amidohydrolase family ND447_06925 PF00392 Bacterial regulatory proteins, gntR family ND447_06925 PF07702 UTRA domain ND447_06930 PF01979 Amidohydrolase family ND447_06935 PF05962 HutD ND447_06940 PF03466 LysR substrate binding domain ND447_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_06950 PF03824 High-affinity nickel-transport protein ND447_06955 PF00708 Acylphosphatase ND447_06955 PF17788 HypF Kae1-like domain ND447_06955 PF01300 Telomere recombination ND447_06955 PF07503 HypF finger ND447_06960 PF01568 Molydopterin dinucleotide binding domain ND447_06960 PF00384 Molybdopterin oxidoreductase ND447_06960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND447_06965 PF12800 4Fe-4S binding domain ND447_06965 PF13247 4Fe-4S dicluster domain ND447_06970 PF01750 Hydrogenase maturation protease ND447_06975 PF07450 Formate hydrogenlyase maturation protein HycH ND447_06980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND447_06985 PF12838 4Fe-4S dicluster domain ND447_06990 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND447_06990 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND447_06990 PF00374 Nickel-dependent hydrogenase ND447_06995 PF00146 NADH dehydrogenase ND447_07000 PF00361 Proton-conducting membrane transporter ND447_07005 PF13247 4Fe-4S dicluster domain ND447_07010 PF11046 Transcriptional repressor of hyc and hyp operons ND447_07015 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND447_07020 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND447_07025 PF01455 HupF/HypC family ND447_07030 PF01924 Hydrogenase formation hypA family ND447_07035 PF00586 AIR synthase related protein, N-terminal domain ND447_07035 PF02769 AIR synthase related protein, C-terminal domain ND447_07040 PF02954 Bacterial regulatory protein, Fis family ND447_07040 PF00158 Sigma-54 interaction domain ND447_07040 PF01590 GAF domain ND447_07050 PF13954 PapC N-terminal domain ND447_07050 PF00577 Outer membrane usher protein ND447_07055 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_07055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_07070 PF12833 Helix-turn-helix domain ND447_07075 PF06071 Protein of unknown function (DUF933) ND447_07075 PF01926 50S ribosome-binding GTPase ND447_07085 PF01195 Peptidyl-tRNA hydrolase ND447_07090 PF10762 Protein of unknown function (DUF2583) ND447_07095 PF14572 Phosphoribosyl synthetase-associated domain ND447_07095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND447_07100 PF08544 GHMP kinases C terminal ND447_07100 PF00288 GHMP kinases N terminal domain ND447_07105 PF03550 Outer membrane lipoprotein LolB ND447_07110 PF01488 Shikimate / quinate 5-dehydrogenase ND447_07110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND447_07110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND447_07115 PF00472 RF-1 domain ND447_07115 PF03462 PCRF domain ND447_07120 PF13847 Methyltransferase domain ND447_07120 PF17827 PrmC N-terminal domain ND447_07125 PF04247 Invasion gene expression up-regulator, SirB ND447_07130 PF13369 Transglutaminase-like superfamily ND447_07135 PF00793 DAHP synthetase I family ND447_07140 PF01740 STAS domain ND447_07140 PF00916 Sulfate permease family ND447_07145 PF00990 Diguanylate cyclase, GGDEF domain ND447_07155 PF03009 Glycerophosphoryl diester phosphodiesterase family ND447_07165 PF00854 POT family ND447_07170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND447_07175 PF02811 PHP domain ND447_07180 PF02613 Nitrate reductase delta subunit ND447_07185 PF07273 Protein of unknown function (DUF1439) ND447_07195 PF07690 Major Facilitator Superfamily ND447_07200 PF13302 Acetyltransferase (GNAT) domain ND447_07205 PF04337 Protein of unknown function, DUF480 ND447_07210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND447_07215 PF03023 Lipid II flippase MurJ ND447_07220 PF08479 POTRA domain, ShlB-type ND447_07220 PF17287 POTRA domain ND447_07220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND447_07225 PF08479 POTRA domain, ShlB-type ND447_07225 PF17287 POTRA domain ND447_07225 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND447_07250 PF13332 Hemagglutinin repeat ND447_07250 PF05860 haemagglutination activity domain ND447_07255 PF05860 haemagglutination activity domain ND447_07255 PF13332 Hemagglutinin repeat ND447_07275 PF03485 Arginyl tRNA synthetase N terminal domain ND447_07275 PF05746 DALR anticodon binding domain ND447_07275 PF00750 tRNA synthetases class I (R) ND447_07280 PF06185 YecM protein ND447_07285 PF03932 CutC family ND447_07290 PF08003 Protein of unknown function (DUF1698) ND447_07295 PF13649 Methyltransferase domain ND447_07300 PF01124 MAPEG family ND447_07305 PF01904 Protein of unknown function DUF72 ND447_07315 PF01336 OB-fold nucleic acid binding domain ND447_07315 PF00152 tRNA synthetases class II (D, K and N) ND447_07315 PF02938 GAD domain ND447_07320 PF00293 NUDIX domain ND447_07325 PF01709 Transcriptional regulator ND447_07330 PF02075 Crossover junction endodeoxyribonuclease RuvC ND447_07335 PF07499 RuvA, C-terminal domain ND447_07335 PF01330 RuvA N terminal domain ND447_07340 PF17864 RuvB AAA lid domain ND447_07340 PF05491 RuvB C-terminal winged helix domain ND447_07340 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND447_07345 PF00854 POT family ND447_07350 PF00950 ABC 3 transport family ND447_07355 PF00005 ABC transporter ND447_07360 PF01297 Zinc-uptake complex component A periplasmic ND447_07365 PF01476 LysM domain ND447_07365 PF08525 Opacity-associated protein A N-terminal motif ND447_07365 PF01551 Peptidase family M23 ND447_07370 PF03279 Bacterial lipid A biosynthesis acyltransferase ND447_07375 PF02887 Pyruvate kinase, alpha/beta domain ND447_07375 PF00224 Pyruvate kinase, barrel domain ND447_07380 PF01418 Helix-turn-helix domain, rpiR family ND447_07380 PF01380 SIS domain ND447_07385 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND447_07385 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND447_07390 PF01081 KDPG and KHG aldolase ND447_07395 PF00893 Small Multidrug Resistance protein ND447_07400 PF00893 Small Multidrug Resistance protein ND447_07405 PF01042 Endoribonuclease L-PSP ND447_07410 PF13307 Helicase C-terminal domain ND447_07410 PF04851 Type III restriction enzyme, res subunit ND447_07415 PF00814 Glycoprotease family ND447_07420 PF03843 Outer membrane lipoprotein Slp family ND447_07425 PF00501 AMP-binding enzyme ND447_07425 PF13193 AMP-binding enzyme C-terminal domain ND447_07430 PF01612 3'-5' exonuclease ND447_07430 PF00570 HRDC domain ND447_07435 PF03776 Septum formation topological specificity factor MinE ND447_07440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND447_07445 PF05209 Septum formation inhibitor MinC, N-terminal domain ND447_07445 PF03775 Septum formation inhibitor MinC, C-terminal domain ND447_07450 PF05166 YcgL domain ND447_07455 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND447_07460 PF03692 Putative zinc- or iron-chelating domain ND447_07475 PF02600 Disulfide bond formation protein DsbB ND447_07480 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND447_07485 PF07840 FadR C-terminal domain ND447_07485 PF00392 Bacterial regulatory proteins, gntR family ND447_07490 PF04293 SpoVR like protein ND447_07495 PF01266 FAD dependent oxidoreductase ND447_07500 PF00842 Alanine racemase, C-terminal domain ND447_07500 PF01168 Alanine racemase, N-terminal domain ND447_07505 PF07690 Major Facilitator Superfamily ND447_07515 PF00563 EAL domain ND447_07515 PF00990 Diguanylate cyclase, GGDEF domain ND447_07515 PF13426 PAS domain ND447_07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_07520 PF03466 LysR substrate binding domain ND447_07525 PF03306 Alpha-acetolactate decarboxylase ND447_07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND447_07530 PF00205 Thiamine pyrophosphate enzyme, central domain ND447_07530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND447_07535 PF04285 Protein of unknown function (DUF444) ND447_07540 PF08298 PrkA AAA domain ND447_07540 PF06798 PrkA serine protein kinase C-terminal domain ND447_07550 PF06629 MltA-interacting protein MipA ND447_07555 PF00884 Sulfatase ND447_07560 PF01263 Aldose 1-epimerase ND447_07565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND447_07565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND447_07570 PF01641 SelR domain ND447_07575 PF07023 Protein of unknown function (DUF1315) ND447_07580 PF00857 Isochorismatase family ND447_07585 PF00710 Asparaginase, N-terminal ND447_07585 PF17763 Glutaminase/Asparaginase C-terminal domain ND447_07590 PF01343 Peptidase family S49 ND447_07595 PF00881 Nitroreductase family ND447_07600 PF02769 AIR synthase related protein, C-terminal domain ND447_07600 PF00586 AIR synthase related protein, N-terminal domain ND447_07605 PF01751 Toprim domain ND447_07605 PF01131 DNA topoisomerase ND447_07610 PF07383 Protein of unknown function (DUF1496) ND447_07615 PF00293 NUDIX domain ND447_07620 PF03372 Endonuclease/Exonuclease/phosphatase family ND447_07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_07630 PF03466 LysR substrate binding domain ND447_07650 PF01842 ACT domain ND447_07650 PF00551 Formyl transferase ND447_07655 PF02810 SEC-C motif ND447_07660 PF01734 Patatin-like phospholipase ND447_07665 PF00072 Response regulator receiver domain ND447_07670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND447_07670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND447_07670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND447_07675 PF00816 H-NS histone family ND447_07680 PF00265 Thymidine kinase ND447_07685 PF00465 Iron-containing alcohol dehydrogenase ND447_07685 PF00171 Aldehyde dehydrogenase family ND447_07695 PF01914 MarC family integral membrane protein ND447_07700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_07705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_07710 PF00528 Binding-protein-dependent transport system inner membrane component ND447_07715 PF00528 Binding-protein-dependent transport system inner membrane component ND447_07715 PF12911 N-terminal TM domain of oligopeptide transport permease C ND447_07720 PF00005 ABC transporter ND447_07720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_07725 PF00005 ABC transporter ND447_07725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_07730 PF04269 Protein of unknown function, DUF440 ND447_07735 PF13091 PLD-like domain ND447_07735 PF13396 Phospholipase_D-nuclease N-terminal ND447_07755 PF03795 YCII-related domain ND447_07770 PF00486 Transcriptional regulatory protein, C terminal ND447_07780 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_07780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_07785 PF13953 PapC C-terminal domain ND447_07785 PF00577 Outer membrane usher protein ND447_07785 PF13954 PapC N-terminal domain ND447_07805 PF03544 Gram-negative bacterial TonB protein C-terminal ND447_07810 PF03061 Thioesterase superfamily ND447_07815 PF04279 Intracellular septation protein A ND447_07820 PF01740 STAS domain ND447_07820 PF00916 Sulfate permease family ND447_07830 PF03692 Putative zinc- or iron-chelating domain ND447_07835 PF03922 OmpW family ND447_07845 PF00290 Tryptophan synthase alpha chain ND447_07850 PF00291 Pyridoxal-phosphate dependent enzyme ND447_07855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND447_07855 PF00218 Indole-3-glycerol phosphate synthase ND447_07860 PF02885 Glycosyl transferase family, helical bundle domain ND447_07860 PF00591 Glycosyl transferase family, a/b domain ND447_07865 PF00117 Glutamine amidotransferase class-I ND447_07870 PF04715 Anthranilate synthase component I, N terminal region ND447_07870 PF00425 chorismate binding enzyme ND447_07875 PF02811 PHP domain ND447_07880 PF01300 Telomere recombination ND447_07900 PF01479 S4 domain ND447_07900 PF00849 RNA pseudouridylate synthase ND447_07905 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND447_07910 PF00106 short chain dehydrogenase ND447_07915 PF08496 Peptidase family S49 N-terminal ND447_07915 PF01343 Peptidase family S49 ND447_07920 PF10692 Protein of unknown function (DUF2498) ND447_07925 PF01131 DNA topoisomerase ND447_07925 PF01751 Toprim domain ND447_07925 PF01396 Topoisomerase DNA binding C4 zinc finger ND447_07925 PF08272 Topoisomerase I zinc-ribbon-like ND447_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_07930 PF03466 LysR substrate binding domain ND447_07945 PF00330 Aconitase family (aconitate hydratase) ND447_07945 PF00694 Aconitase C-terminal domain ND447_07950 PF00925 GTP cyclohydrolase II ND447_07955 PF01569 PAP2 superfamily ND447_07960 PF06305 Lipopolysaccharide assembly protein A domain ND447_07965 PF18073 Rubredoxin metal binding domain ND447_07975 PF07338 Protein of unknown function (DUF1471) ND447_07980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND447_07985 PF01253 Translation initiation factor SUI1 ND447_07990 PF05433 Glycine zipper 2TM domain ND447_07995 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND447_08000 PF05231 MASE1 ND447_08000 PF08447 PAS fold ND447_08000 PF00990 Diguanylate cyclase, GGDEF domain ND447_08000 PF13426 PAS domain ND447_08000 PF08448 PAS fold ND447_08000 PF00563 EAL domain ND447_08005 PF00773 RNB domain ND447_08005 PF00575 S1 RNA binding domain ND447_08005 PF08206 Ribonuclease B OB domain ND447_08010 PF10576 Iron-sulfur binding domain of endonuclease III ND447_08010 PF00633 Helix-hairpin-helix motif ND447_08010 PF00730 HhH-GPD superfamily base excision DNA repair protein ND447_08015 PF02508 Rnf-Nqr subunit, membrane protein ND447_08020 PF04205 FMN-binding domain ND447_08025 PF03116 NQR2, RnfD, RnfE family ND447_08030 PF12833 Helix-turn-helix domain ND447_08030 PF06445 GyrI-like small molecule binding domain ND447_08035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND447_08035 PF13237 4Fe-4S dicluster domain ND447_08035 PF13375 RnfC Barrel sandwich hybrid domain ND447_08035 PF10531 SLBB domain ND447_08040 PF04060 Putative Fe-S cluster ND447_08045 PF02508 Rnf-Nqr subunit, membrane protein ND447_08050 PF10754 Protein of unknown function (DUF2569) ND447_08055 PF01268 Formate--tetrahydrofolate ligase ND447_08060 PF03848 Tellurite resistance protein TehB ND447_08060 PF09313 Domain of unknown function (DUF1971) ND447_08065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND447_08065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND447_08070 PF13593 SBF-like CPA transporter family (DUF4137) ND447_08075 PF00962 Adenosine/AMP deaminase ND447_08080 PF06097 Bacterial protein of unknown function (DUF945) ND447_08085 PF01238 Phosphomannose isomerase type I ND447_08090 PF00206 Lyase ND447_08090 PF10415 Fumarase C C-terminus ND447_08095 PF05472 DNA replication terminus site-binding protein (Ter protein) ND447_08100 PF00480 ROK family ND447_08110 PF00654 Voltage gated chloride channel ND447_08115 PF06649 Protein of unknown function (DUF1161) ND447_08120 PF06932 Protein of unknown function (DUF1283) ND447_08125 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND447_08130 PF00106 short chain dehydrogenase ND447_08135 PF01510 N-acetylmuramoyl-L-alanine amidase ND447_08155 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND447_08155 PF01048 Phosphorylase superfamily ND447_08195 PF13419 Haloacid dehalogenase-like hydrolase ND447_08205 PF06445 GyrI-like small molecule binding domain ND447_08210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND447_08210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND447_08215 PF00027 Cyclic nucleotide-binding domain ND447_08215 PF13545 Crp-like helix-turn-helix domain ND447_08220 PF00582 Universal stress protein family ND447_08230 PF00455 DeoR C terminal sensor domain ND447_08230 PF08220 DeoR-like helix-turn-helix domain ND447_08235 PF03611 PTS system sugar-specific permease component ND447_08240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND447_08245 PF00596 Class II Aldolase and Adducin N-terminal domain ND447_08250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND447_08255 PF01261 Xylose isomerase-like TIM barrel ND447_08260 PF02233 NAD(P) transhydrogenase beta subunit ND447_08265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND447_08265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND447_08265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND447_08270 PF07338 Protein of unknown function (DUF1471) ND447_08275 PF13520 Amino acid permease ND447_08285 PF00072 Response regulator receiver domain ND447_08285 PF00486 Transcriptional regulatory protein, C terminal ND447_08290 PF00672 HAMP domain ND447_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_08290 PF00512 His Kinase A (phospho-acceptor) domain ND447_08295 PF00080 Copper/zinc superoxide dismutase (SODC) ND447_08300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND447_08305 PF12833 Helix-turn-helix domain ND447_08310 PF01161 Phosphatidylethanolamine-binding protein ND447_08315 PF06392 Acid shock protein repeat ND447_08320 PF00089 Trypsin ND447_08325 PF00270 DEAD/DEAH box helicase ND447_08325 PF11898 Domain of unknown function (DUF3418) ND447_08325 PF04408 Helicase associated domain (HA2) ND447_08325 PF00271 Helicase conserved C-terminal domain ND447_08325 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND447_08330 PF02525 Flavodoxin-like fold ND447_08335 PF07027 Protein of unknown function (DUF1318) ND447_08340 PF13617 YnbE-like lipoprotein ND447_08350 PF11739 Dicarboxylate transport ND447_08355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND447_08355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND447_08360 PF03724 META domain ND447_08365 PF03891 Domain of unknown function (DUF333) ND447_08370 PF02308 MgtC family ND447_08375 PF00893 Small Multidrug Resistance protein ND447_08380 PF10371 Domain of unknown function ND447_08380 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND447_08380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND447_08380 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND447_08380 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND447_08385 PF01171 PP-loop family ND447_08390 PF01544 CorA-like Mg2+ transporter protein ND447_08395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_08400 PF00246 Zinc carboxypeptidase ND447_08405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND447_08405 PF13378 Enolase C-terminal domain-like ND447_08410 PF08534 Redoxin ND447_08415 PF18024 Helix-turn-helix domain ND447_08415 PF00158 Sigma-54 interaction domain ND447_08420 PF09722 Protein of unknown function (DUF2384) ND447_08425 PF08808 RES domain ND447_08430 PF05128 Domain of unknown function (DUF697) ND447_08435 PF04317 YcjX-like family, DUF463 ND447_08440 PF09584 Phage shock protein PspD (Phageshock_PspD) ND447_08445 PF04024 PspC domain ND447_08450 PF06667 Phage shock protein B ND447_08455 PF04012 PspA/IM30 family ND447_08460 PF02954 Bacterial regulatory protein, Fis family ND447_08460 PF00158 Sigma-54 interaction domain ND447_08470 PF02917 Pertussis toxin, subunit 1 ND447_08475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_08480 PF00528 Binding-protein-dependent transport system inner membrane component ND447_08485 PF12911 N-terminal TM domain of oligopeptide transport permease C ND447_08485 PF00528 Binding-protein-dependent transport system inner membrane component ND447_08490 PF00005 ABC transporter ND447_08490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_08495 PF00005 ABC transporter ND447_08505 PF00854 POT family ND447_08515 PF00226 DnaJ domain ND447_08515 PF01556 DnaJ C terminal domain ND447_08525 PF04893 Yip1 domain ND447_08535 PF11656 YjbD family (DUF3811) ND447_08540 PF00043 Glutathione S-transferase, C-terminal domain ND447_08540 PF02798 Glutathione S-transferase, N-terminal domain ND447_08545 PF08543 Phosphomethylpyrimidine kinase ND447_08550 PF01479 S4 domain ND447_08550 PF00579 tRNA synthetases class I (W and Y) ND447_08555 PF01243 Pyridoxamine 5'-phosphate oxidase ND447_08555 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND447_08560 PF03702 Anhydro-N-acetylmuramic acid kinase ND447_08565 PF05433 Glycine zipper 2TM domain ND447_08570 PF01047 MarR family ND447_08580 PF00248 Aldo/keto reductase family ND447_08585 PF06945 Protein of unknown function (DUF1289) ND447_08590 PF08019 Phosphoethanolamine transferase EptA/EptB ND447_08590 PF00884 Sulfatase ND447_08595 PF16925 Tetracyclin repressor-like, C-terminal domain ND447_08595 PF00440 Bacterial regulatory proteins, tetR family ND447_08600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND447_08605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND447_08610 PF00929 Exonuclease ND447_08615 PF00462 Glutaredoxin ND447_08620 PF00877 NlpC/P60 family ND447_08625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND447_08625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND447_08635 PF00356 Bacterial regulatory proteins, lacI family ND447_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_08640 PF03466 LysR substrate binding domain ND447_08645 PF07690 Major Facilitator Superfamily ND447_08655 PF00677 Lumazine binding domain ND447_08660 PF01554 MatE ND447_08680 PF00224 Pyruvate kinase, barrel domain ND447_08680 PF02887 Pyruvate kinase, alpha/beta domain ND447_08685 PF04728 Lipoprotein leucine-zipper ND447_08690 PF17969 L,D-transpeptidase C-terminal domain ND447_08690 PF03734 L,D-transpeptidase catalytic domain ND447_08690 PF01476 LysM domain ND447_08695 PF02657 Fe-S metabolism associated domain ND447_08700 PF00266 Aminotransferase class-V ND447_08705 PF01458 Uncharacterized protein family (UPF0051) ND447_08710 PF00005 ABC transporter ND447_08715 PF01458 Uncharacterized protein family (UPF0051) ND447_08720 PF01521 Iron-sulphur cluster biosynthesis ND447_08725 PF03061 Thioesterase superfamily ND447_08730 PF02913 FAD linked oxidases, C-terminal domain ND447_08730 PF01565 FAD binding domain ND447_08730 PF13183 4Fe-4S dicluster domain ND447_08735 PF01594 AI-2E family transporter ND447_08745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND447_08745 PF00391 PEP-utilising enzyme, mobile domain ND447_08745 PF02896 PEP-utilising enzyme, TIM barrel domain ND447_08750 PF03618 Kinase/pyrophosphorylase ND447_08755 PF00793 DAHP synthetase I family ND447_08760 PF10636 Hemin uptake protein hemP ND447_08765 PF07715 TonB-dependent Receptor Plug Domain ND447_08765 PF00593 TonB dependent receptor ND447_08770 PF05171 Haemin-degrading HemS.ChuX domain ND447_08775 PF01497 Periplasmic binding protein ND447_08780 PF01032 FecCD transport family ND447_08785 PF00005 ABC transporter ND447_08790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND447_08795 PF03099 Biotin/lipoate A/B protein ligase family ND447_08795 PF10437 Bacterial lipoate protein ligase C-terminus ND447_08800 PF00877 NlpC/P60 family ND447_08810 PF00892 EamA-like transporter family ND447_08815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND447_08820 PF01522 Polysaccharide deacetylase ND447_08825 PF01370 NAD dependent epimerase/dehydratase family ND447_08825 PF02911 Formyl transferase, C-terminal domain ND447_08825 PF00551 Formyl transferase ND447_08830 PF00535 Glycosyl transferase family 2 ND447_08835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND447_08840 PF00005 ABC transporter ND447_08845 PF01032 FecCD transport family ND447_08850 PF13411 MerR HTH family regulatory protein ND447_08850 PF00145 C-5 cytosine-specific DNA methylase ND447_08855 PF09553 Eco47II restriction endonuclease ND447_08890 PF02661 Fic/DOC family ND447_08905 PF05154 TM2 domain ND447_08910 PF00216 Bacterial DNA-binding protein ND447_08915 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND447_08915 PF03483 B3/4 domain ND447_08915 PF03147 Ferredoxin-fold anticodon binding domain ND447_08915 PF01588 Putative tRNA binding domain ND447_08915 PF03484 tRNA synthetase B5 domain ND447_08920 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND447_08920 PF01409 tRNA synthetases class II core domain (F) ND447_08925 PF00453 Ribosomal protein L20 ND447_08930 PF01632 Ribosomal protein L35 ND447_08935 PF00707 Translation initiation factor IF-3, C-terminal domain ND447_08935 PF05198 Translation initiation factor IF-3, N-terminal domain ND447_08940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND447_08940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND447_08940 PF03129 Anticodon binding domain ND447_08940 PF02824 TGS domain ND447_08970 PF01914 MarC family integral membrane protein ND447_08975 PF01464 Transglycosylase SLT domain ND447_08980 PF01297 Zinc-uptake complex component A periplasmic ND447_08985 PF00005 ABC transporter ND447_08990 PF00950 ABC 3 transport family ND447_08995 PF00950 ABC 3 transport family ND447_09000 PF03881 Fructosamine kinase ND447_09005 PF14002 YniB-like protein ND447_09010 PF13419 Haloacid dehalogenase-like hydrolase ND447_09015 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND447_09020 PF00375 Sodium:dicarboxylate symporter family ND447_09025 PF01510 N-acetylmuramoyl-L-alanine amidase ND447_09030 PF09339 IclR helix-turn-helix domain ND447_09030 PF01614 Bacterial transcriptional regulator ND447_09035 PF07690 Major Facilitator Superfamily ND447_09045 PF01435 Peptidase family M48 ND447_09050 PF00595 PDZ domain ND447_09050 PF03572 Peptidase family S41 ND447_09050 PF17804 Tail specific protease N-terminal domain ND447_09050 PF11818 C-terminal domain of tail specific protease (DUF3340) ND447_09055 PF04352 ProQ/FINO family ND447_09055 PF17516 ProQ C-terminal domain ND447_09060 PF13185 GAF domain ND447_09065 PF04403 Paraquat-inducible protein A ND447_09070 PF02470 MlaD protein ND447_09075 PF00360 Phytochrome region ND447_09075 PF00563 EAL domain ND447_09075 PF01590 GAF domain ND447_09075 PF00990 Diguanylate cyclase, GGDEF domain ND447_09080 PF07351 Protein of unknown function (DUF1480) ND447_09105 PF05643 Putative bacterial lipoprotein (DUF799) ND447_09115 PF03783 Curli production assembly/transport component CsgG ND447_09120 PF10753 Toxin GhoT_OrtT ND447_09140 PF00144 Beta-lactamase ND447_09285 PF00959 Phage lysozyme ND447_09290 PF04971 Bacteriophage P21 holin S ND447_09310 PF07102 Protein of unknown function (DUF1364) ND447_09320 PF05063 MT-A70 ND447_09325 PF01555 DNA methylase ND447_09335 PF17854 FtsK alpha domain ND447_09335 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND447_09335 PF09397 Ftsk gamma domain ND447_09335 PF01580 FtsK/SpoIIIE family ND447_09375 PF01381 Helix-turn-helix ND447_09375 PF00717 Peptidase S24-like ND447_09440 PF07825 Excisionase-like protein ND447_09450 PF10709 Protein of unknown function (DUF2511) ND447_09455 PF05425 Copper resistance protein D ND447_09460 PF04234 CopC domain ND447_09465 PF00210 Ferritin-like domain ND447_09470 PF06440 DNA polymerase III, theta subunit ND447_09475 PF00561 alpha/beta hydrolase fold ND447_09485 PF00326 Prolyl oligopeptidase family ND447_09485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND447_09490 PF13995 YebF-like protein ND447_09495 PF04266 ASCH domain ND447_09500 PF07130 YebG protein ND447_09505 PF03880 DbpA RNA binding domain ND447_09505 PF00270 DEAD/DEAH box helicase ND447_09505 PF00271 Helicase conserved C-terminal domain ND447_09510 PF02222 ATP-grasp domain ND447_09515 PF03701 Uncharacterised protein family (UPF0181) ND447_09520 PF04715 Anthranilate synthase component I, N terminal region ND447_09520 PF00425 chorismate binding enzyme ND447_09525 PF00293 NUDIX domain ND447_09530 PF03315 Serine dehydratase beta chain ND447_09530 PF03313 Serine dehydratase alpha chain ND447_09535 PF03471 Transporter associated domain ND447_09535 PF03741 Integral membrane protein TerC family ND447_09540 PF03610 PTS system fructose IIA component ND447_09540 PF03830 PTS system sorbose subfamily IIB component ND447_09545 PF03609 PTS system sorbose-specific iic component ND447_09550 PF03613 PTS system mannose/fructose/sorbose family IID component ND447_09555 PF06173 Protein of unknown function (DUF986) ND447_09560 PF02659 Putative manganese efflux pump ND447_09565 PF02441 Flavoprotein ND447_09580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND447_09580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND447_09580 PF02770 Acyl-CoA dehydrogenase, middle domain ND447_09590 PF00732 GMC oxidoreductase ND447_09590 PF05199 GMC oxidoreductase ND447_09595 PF13193 AMP-binding enzyme C-terminal domain ND447_09595 PF00668 Condensation domain ND447_09595 PF00550 Phosphopantetheine attachment site ND447_09595 PF00501 AMP-binding enzyme ND447_09600 PF07690 Major Facilitator Superfamily ND447_09620 PF13847 Methyltransferase domain ND447_09625 PF03717 Penicillin-binding Protein dimerisation domain ND447_09625 PF00905 Penicillin binding protein transpeptidase domain ND447_09630 PF02578 Multi-copper polyphenol oxidoreductase laccase ND447_09635 PF00313 'Cold-shock' DNA-binding domain ND447_09640 PF10736 Protein of unknown function (DUF2627) ND447_09645 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND447_09650 PF00324 Amino acid permease ND447_09665 PF13974 YebO-like protein ND447_09670 PF13998 MgrB protein ND447_09675 PF13996 YobH-like protein ND447_09680 PF10964 Protein of unknown function (DUF2766) ND447_09685 PF12833 Helix-turn-helix domain ND447_09700 PF13520 Amino acid permease ND447_09705 PF00664 ABC transporter transmembrane region ND447_09705 PF00005 ABC transporter ND447_09715 PF00360 Phytochrome region ND447_09715 PF00563 EAL domain ND447_09715 PF01590 GAF domain ND447_09715 PF00990 Diguanylate cyclase, GGDEF domain ND447_09720 PF03372 Endonuclease/Exonuclease/phosphatase family ND447_09730 PF06411 HdeA/HdeB family ND447_09735 PF01820 D-ala D-ala ligase N-terminus ND447_09735 PF07478 D-ala D-ala ligase C-terminus ND447_09750 PF08241 Methyltransferase domain ND447_09755 PF00313 'Cold-shock' DNA-binding domain ND447_09760 PF00313 'Cold-shock' DNA-binding domain ND447_09765 PF00313 'Cold-shock' DNA-binding domain ND447_09775 PF04794 YdjC-like protein ND447_09780 PF12833 Helix-turn-helix domain ND447_09780 PF07883 Cupin domain ND447_09785 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND447_09790 PF00232 Glycosyl hydrolase family 1 ND447_09795 PF02378 Phosphotransferase system, EIIC ND447_09800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND447_09805 PF00849 RNA pseudouridylate synthase ND447_09805 PF01479 S4 domain ND447_09815 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND447_09820 PF03553 Na+/H+ antiporter family ND447_09830 PF13520 Amino acid permease ND447_09845 PF00849 RNA pseudouridylate synthase ND447_09850 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND447_09855 PF13520 Amino acid permease ND447_09860 PF04960 Glutaminase ND447_09890 PF13673 Acetyltransferase (GNAT) domain ND447_09900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ND447_09900 PF00034 Cytochrome c ND447_09910 PF00528 Binding-protein-dependent transport system inner membrane component ND447_09915 PF00005 ABC transporter ND447_09925 PF02203 Tar ligand binding domain homologue ND447_09925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_09925 PF00672 HAMP domain ND447_09930 PF00665 Integrase core domain ND447_09930 PF13333 Integrase core domain ND447_09930 PF13276 HTH-like domain ND447_09950 PF01066 CDP-alcohol phosphatidyltransferase ND447_09955 PF01541 GIY-YIG catalytic domain ND447_09955 PF02151 UvrB/uvrC motif ND447_09955 PF08459 UvrC Helix-hairpin-helix N-terminal ND447_09960 PF00196 Bacterial regulatory proteins, luxR family ND447_09960 PF00072 Response regulator receiver domain ND447_09965 PF10769 Protein of unknown function (DUF2594) ND447_09985 PF00324 Amino acid permease ND447_09990 PF01276 Orn/Lys/Arg decarboxylase, major domain ND447_09990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND447_09990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND447_09995 PF13520 Amino acid permease ND447_10000 PF00486 Transcriptional regulatory protein, C terminal ND447_10000 PF18500 CadC C-terminal domain 1 ND447_10005 PF00474 Sodium:solute symporter family ND447_10010 PF00171 Aldehyde dehydrogenase family ND447_10010 PF01619 Proline dehydrogenase ND447_10010 PF14850 DNA-binding domain of Proline dehydrogenase ND447_10010 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND447_10015 PF00005 ABC transporter ND447_10020 PF00528 Binding-protein-dependent transport system inner membrane component ND447_10025 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_10030 PF00291 Pyridoxal-phosphate dependent enzyme ND447_10035 PF02899 Phage integrase, N-terminal SAM-like domain ND447_10040 PF04542 Sigma-70 region 2 ND447_10040 PF04539 Sigma-70 region 3 ND447_10040 PF04545 Sigma-70, region 4 ND447_10045 PF00700 Bacterial flagellin C-terminal helical region ND447_10045 PF08884 Flagellin D3 domain ND447_10045 PF00669 Bacterial flagellin N-terminal helical region ND447_10050 PF00669 Bacterial flagellin N-terminal helical region ND447_10050 PF00700 Bacterial flagellin C-terminal helical region ND447_10050 PF08884 Flagellin D3 domain ND447_10055 PF08884 Flagellin D3 domain ND447_10055 PF00700 Bacterial flagellin C-terminal helical region ND447_10055 PF00669 Bacterial flagellin N-terminal helical region ND447_10060 PF07195 Flagellar hook-associated protein 2 C-terminus ND447_10060 PF07196 Flagellin hook IN motif ND447_10060 PF02465 Flagellar hook-associated protein 2 N-terminus ND447_10065 PF02561 Flagellar protein FliS ND447_10070 PF05400 Flagellar protein FliT ND447_10075 PF12833 Helix-turn-helix domain ND447_10080 PF01966 HD domain ND447_10085 PF02254 TrkA-N domain ND447_10085 PF07885 Ion channel ND447_10090 PF01223 DNA/RNA non-specific endonuclease ND447_10100 PF02049 Flagellar hook-basal body complex protein FliE ND447_10105 PF01514 Secretory protein of YscJ/FliF family ND447_10105 PF08345 Flagellar M-ring protein C-terminal ND447_10110 PF01706 FliG C-terminal domain ND447_10110 PF14841 FliG middle domain ND447_10110 PF14842 FliG N-terminal domain ND447_10115 PF02108 Flagellar assembly protein FliH ND447_10120 PF18269 T3SS EscN ATPase C-terminal domain ND447_10120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND447_10125 PF02050 Flagellar FliJ protein ND447_10130 PF02120 Flagellar hook-length control protein FliK ND447_10135 PF03748 Flagellar basal body-associated protein FliL ND447_10140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND447_10140 PF02154 Flagellar motor switch protein FliM ND447_10145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND447_10145 PF16973 Flagellar motor switch protein FliN N-terminal ND447_10150 PF04347 Flagellar biosynthesis protein, FliO ND447_10155 PF00813 FliP family ND447_10160 PF01313 Bacterial export proteins, family 3 ND447_10165 PF01311 Bacterial export proteins, family 1 ND447_10170 PF00669 Bacterial flagellin N-terminal helical region ND447_10175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND447_10175 PF00460 Flagella basal body rod protein ND447_10180 PF10135 Rod binding protein ND447_10180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND447_10185 PF02119 Flagellar P-ring protein ND447_10190 PF02107 Flagellar L-ring protein ND447_10195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND447_10195 PF00460 Flagella basal body rod protein ND447_10200 PF00460 Flagella basal body rod protein ND447_10200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND447_10205 PF07559 Flagellar basal body protein FlaE ND447_10205 PF00460 Flagella basal body rod protein ND447_10205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND447_10210 PF03963 Flagellar hook capping protein - N-terminal region ND447_10210 PF13860 FlgD Ig-like domain ND447_10210 PF13861 FlgD Tudor-like domain ND447_10215 PF00460 Flagella basal body rod protein ND447_10215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND447_10220 PF00460 Flagella basal body rod protein ND447_10225 PF17656 FlgA N-terminal domain ND447_10225 PF13144 Chaperone for flagella basal body P-ring formation ND447_10230 PF04316 Anti-sigma-28 factor, FlgM ND447_10235 PF05130 FlgN protein ND447_10240 PF06366 Flagellar protein FlhE ND447_10245 PF00771 FHIPEP family ND447_10250 PF01312 FlhB HrpN YscU SpaS Family ND447_10255 PF00082 Subtilase family ND447_10255 PF01483 Proprotein convertase P-domain ND447_10260 PF00196 Bacterial regulatory proteins, luxR family ND447_10270 PF00419 Fimbrial protein ND447_10275 PF13953 PapC C-terminal domain ND447_10275 PF13954 PapC N-terminal domain ND447_10275 PF00577 Outer membrane usher protein ND447_10280 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_10280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_10290 PF00419 Fimbrial protein ND447_10320 PF04344 Chemotaxis phosphatase, CheZ ND447_10325 PF00072 Response regulator receiver domain ND447_10330 PF01339 CheB methylesterase ND447_10330 PF00072 Response regulator receiver domain ND447_10335 PF01739 CheR methyltransferase, SAM binding domain ND447_10335 PF03705 CheR methyltransferase, all-alpha domain ND447_10340 PF00672 HAMP domain ND447_10340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_10340 PF02203 Tar ligand binding domain homologue ND447_10345 PF00672 HAMP domain ND447_10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_10345 PF02203 Tar ligand binding domain homologue ND447_10350 PF01584 CheW-like domain ND447_10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_10355 PF01627 Hpt domain ND447_10355 PF02895 Signal transducing histidine kinase, homodimeric domain ND447_10355 PF01584 CheW-like domain ND447_10355 PF09078 CheY binding ND447_10360 PF00691 OmpA family ND447_10360 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND447_10365 PF01618 MotA/TolQ/ExbB proton channel family ND447_10370 PF05280 Flagellar transcriptional activator (FlhC) ND447_10375 PF05247 Flagellar transcriptional activator (FlhD) ND447_10380 PF00582 Universal stress protein family ND447_10385 PF02308 MgtC family ND447_10390 PF00672 HAMP domain ND447_10390 PF02203 Tar ligand binding domain homologue ND447_10390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_10395 PF10781 Dextransucrase DSRB ND447_10400 PF00313 'Cold-shock' DNA-binding domain ND447_10405 PF00356 Bacterial regulatory proteins, lacI family ND447_10410 PF16353 Domain of unknown function(DUF4981) ND447_10410 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND447_10410 PF02929 Beta galactosidase small chain ND447_10410 PF00703 Glycosyl hydrolases family 2 ND447_10410 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND447_10415 PF00698 Acyl transferase domain ND447_10415 PF08240 Alcohol dehydrogenase GroES-like domain ND447_10415 PF00107 Zinc-binding dehydrogenase ND447_10415 PF16197 Ketoacyl-synthetase C-terminal extension ND447_10415 PF00109 Beta-ketoacyl synthase, N-terminal domain ND447_10415 PF08659 KR domain ND447_10415 PF00550 Phosphopantetheine attachment site ND447_10415 PF14765 Polyketide synthase dehydratase ND447_10415 PF02801 Beta-ketoacyl synthase, C-terminal domain ND447_10420 PF10777 Inner membrane protein YlaC ND447_10430 PF14001 YdfZ protein ND447_10440 PF06167 Glucose-regulated metallo-peptidase M90 ND447_10450 PF13356 Arm DNA-binding domain ND447_10450 PF00589 Phage integrase family ND447_10465 PF13693 Winged helix-turn-helix DNA-binding ND447_10500 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ND447_10520 PF04335 VirB8 protein ND447_10525 PF03524 Conjugal transfer protein ND447_10530 PF03743 Bacterial conjugation TrbI-like protein ND447_10535 PF00437 Type II/IV secretion system protein ND447_10550 PF08401 Domain of unknown function (DUF1738) ND447_10550 PF18818 Metallopeptidase superfamily domain ND447_10605 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND447_10605 PF01648 4'-phosphopantetheinyl transferase superfamily ND447_10610 PF00939 Sodium:sulfate symporter transmembrane region ND447_10615 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND447_10620 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND447_10625 PF04223 Citrate lyase, alpha subunit (CitF) ND447_10630 PF03328 HpcH/HpaI aldolase/citrate lyase family ND447_10635 PF06857 Malonate decarboxylase delta subunit (MdcD) ND447_10640 PF08218 Citrate lyase ligase C-terminal domain ND447_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_10645 PF17203 Single cache domain 3 ND447_10645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND447_10645 PF00989 PAS fold ND447_10650 PF12431 Transcriptional regulator ND447_10650 PF00072 Response regulator receiver domain ND447_10655 PF00072 Response regulator receiver domain ND447_10655 PF00196 Bacterial regulatory proteins, luxR family ND447_10660 PF05231 MASE1 ND447_10660 PF07730 Histidine kinase ND447_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_10665 PF07690 Major Facilitator Superfamily ND447_10675 PF00528 Binding-protein-dependent transport system inner membrane component ND447_10680 PF08402 TOBE domain ND447_10680 PF00005 ABC transporter ND447_10695 PF04363 Protein of unknown function (DUF496) ND447_10700 PF04632 Fusaric acid resistance protein family ND447_10710 PF00929 Exonuclease ND447_10710 PF08411 Exonuclease C-terminal ND447_10715 PF13520 Amino acid permease ND447_10720 PF07715 TonB-dependent Receptor Plug Domain ND447_10720 PF00593 TonB dependent receptor ND447_10725 PF00005 ABC transporter ND447_10730 PF01032 FecCD transport family ND447_10740 PF00324 Amino acid permease ND447_10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_10745 PF03466 LysR substrate binding domain ND447_10755 PF03601 Conserved hypothetical protein 698 ND447_10760 PF01261 Xylose isomerase-like TIM barrel ND447_10765 PF02378 Phosphotransferase system, EIIC ND447_10765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND447_10770 PF00294 pfkB family carbohydrate kinase ND447_10775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND447_10775 PF00381 PTS HPr component phosphorylation site ND447_10780 PF00293 NUDIX domain ND447_10785 PF03264 NapC/NirT cytochrome c family, N-terminal region ND447_10790 PF00384 Molybdopterin oxidoreductase ND447_10790 PF18364 Molybdopterin oxidoreductase N-terminal domain ND447_10790 PF01568 Molydopterin dinucleotide binding domain ND447_10795 PF03692 Putative zinc- or iron-chelating domain ND447_10800 PF03222 Tryptophan/tyrosine permease family ND447_10810 PF08207 Elongation factor P (EF-P) KOW-like domain ND447_10810 PF09285 Elongation factor P, C-terminal ND447_10810 PF01132 Elongation factor P (EF-P) OB domain ND447_10815 PF03786 D-mannonate dehydratase (UxuA) ND447_10820 PF01232 Mannitol dehydrogenase Rossmann domain ND447_10820 PF08125 Mannitol dehydrogenase C-terminal domain ND447_10830 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND447_10830 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND447_10835 PF01569 PAP2 superfamily ND447_10840 PF00877 NlpC/P60 family ND447_10845 PF00563 EAL domain ND447_10845 PF12792 CSS motif domain associated with EAL ND447_10850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND447_10855 PF00528 Binding-protein-dependent transport system inner membrane component ND447_10860 PF00528 Binding-protein-dependent transport system inner membrane component ND447_10860 PF12911 N-terminal TM domain of oligopeptide transport permease C ND447_10865 PF00005 ABC transporter ND447_10865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND447_10870 PF13989 YejG-like protein ND447_10875 PF07690 Major Facilitator Superfamily ND447_10880 PF01479 S4 domain ND447_10880 PF00849 RNA pseudouridylate synthase ND447_10885 PF04851 Type III restriction enzyme, res subunit ND447_10885 PF00271 Helicase conserved C-terminal domain ND447_10890 PF01386 Ribosomal L25p family ND447_10895 PF04245 37-kD nucleoid-associated bacterial protein ND447_10900 PF07208 Protein of unknown function (DUF1414) ND447_10905 PF00884 Sulfatase ND447_10905 PF11893 Domain of unknown function (DUF3413) ND447_10920 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND447_10930 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ND447_10935 PF04865 Baseplate J-like protein ND447_10980 PF04984 Phage tail sheath protein subtilisin-like domain ND447_10980 PF17482 Phage tail sheath C-terminal domain ND447_11030 PF03354 Phage Terminase ND447_11050 PF03245 Bacteriophage Rz lysis protein ND447_11055 PF13539 D-alanyl-D-alanine carboxypeptidase ND447_11080 PF00069 Protein kinase domain ND447_11080 PF03793 PASTA domain ND447_11085 PF01555 DNA methylase ND447_11095 PF06147 Protein of unknown function (DUF968) ND447_11110 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND447_11115 PF03354 Phage Terminase ND447_11150 PF10065 Uncharacterized conserved protein (DUF2303) ND447_11195 PF06183 DinI-like family ND447_11200 PF12706 Beta-lactamase superfamily domain ND447_11205 PF00144 Beta-lactamase ND447_11210 PF13302 Acetyltransferase (GNAT) domain ND447_11225 PF00267 Gram-negative porin ND447_11230 PF07690 Major Facilitator Superfamily ND447_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_11235 PF01627 Hpt domain ND447_11235 PF16359 RcsD-ABL domain ND447_11240 PF00196 Bacterial regulatory proteins, luxR family ND447_11240 PF00072 Response regulator receiver domain ND447_11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_11245 PF00072 Response regulator receiver domain ND447_11245 PF00512 His Kinase A (phospho-acceptor) domain ND447_11245 PF09456 RcsC Alpha-Beta-Loop (ABL) ND447_11250 PF00521 DNA gyrase/topoisomerase IV, subunit A ND447_11250 PF03989 DNA gyrase C-terminal domain, beta-propeller ND447_11260 PF02867 Ribonucleotide reductase, barrel domain ND447_11260 PF00317 Ribonucleotide reductase, all-alpha domain ND447_11260 PF03477 ATP cone domain ND447_11265 PF00268 Ribonucleotide reductase, small chain ND447_11270 PF00111 2Fe-2S iron-sulfur cluster binding domain ND447_11280 PF03974 Ecotin ND447_11285 PF00994 Probable molybdopterin binding domain ND447_11290 PF04138 GtrA-like protein ND447_11295 PF00535 Glycosyl transferase family 2 ND447_11305 PF03222 Tryptophan/tyrosine permease family ND447_11310 PF07437 YfaZ precursor ND447_11315 PF00199 Catalase ND447_11315 PF06628 Catalase-related immune-responsive ND447_11320 PF13193 AMP-binding enzyme C-terminal domain ND447_11320 PF00501 AMP-binding enzyme ND447_11325 PF13378 Enolase C-terminal domain-like ND447_11330 PF00378 Enoyl-CoA hydratase/isomerase ND447_11335 PF12697 Alpha/beta hydrolase family ND447_11340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND447_11340 PF16582 Middle domain of thiamine pyrophosphate ND447_11340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND447_11345 PF00425 chorismate binding enzyme ND447_11350 PF05957 Bacterial protein of unknown function (DUF883) ND447_11355 PF06496 Protein of unknown function (DUF1097) ND447_11360 PF00361 Proton-conducting membrane transporter ND447_11365 PF00361 Proton-conducting membrane transporter ND447_11370 PF00361 Proton-conducting membrane transporter ND447_11370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND447_11375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND447_11380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND447_11385 PF12838 4Fe-4S dicluster domain ND447_11390 PF00146 NADH dehydrogenase ND447_11395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND447_11395 PF00384 Molybdopterin oxidoreductase ND447_11395 PF01568 Molydopterin dinucleotide binding domain ND447_11395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND447_11400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND447_11400 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND447_11400 PF10531 SLBB domain ND447_11410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND447_11410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND447_11415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND447_11420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND447_11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_11425 PF03466 LysR substrate binding domain ND447_11430 PF00155 Aminotransferase class I and II ND447_11440 PF02080 TrkA-C domain ND447_11440 PF03600 Citrate transporter ND447_11450 PF03887 YfbU domain ND447_11455 PF04217 Protein of unknown function, DUF412 ND447_11460 PF00871 Acetokinase family ND447_11465 PF01515 Phosphate acetyl/butaryl transferase ND447_11465 PF07085 DRTGG domain ND447_11470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND447_11470 PF00356 Bacterial regulatory proteins, lacI family ND447_11475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND447_11485 PF03611 PTS system sugar-specific permease component ND447_11490 PF00293 NUDIX domain ND447_11495 PF12850 Calcineurin-like phosphoesterase superfamily domain ND447_11510 PF00043 Glutathione S-transferase, C-terminal domain ND447_11510 PF02798 Glutathione S-transferase, N-terminal domain ND447_11515 PF08338 Domain of unknown function (DUF1731) ND447_11515 PF01370 NAD dependent epimerase/dehydratase family ND447_11520 PF00005 ABC transporter ND447_11525 PF00528 Binding-protein-dependent transport system inner membrane component ND447_11530 PF00528 Binding-protein-dependent transport system inner membrane component ND447_11535 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_11545 PF02441 Flavoprotein ND447_11550 PF00156 Phosphoribosyl transferase domain ND447_11555 PF02674 Colicin V production protein ND447_11560 PF05036 Sporulation related domain ND447_11565 PF08245 Mur ligase middle domain ND447_11565 PF02875 Mur ligase family, glutamate ligase domain ND447_11570 PF01039 Carboxyl transferase domain ND447_11570 PF17848 Acetyl-coA carboxylase zinc finger domain ND447_11575 PF09335 SNARE associated Golgi protein ND447_11580 PF01416 tRNA pseudouridine synthase ND447_11585 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND447_11585 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND447_11590 PF11890 Domain of unknown function (DUF3410) ND447_11590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND447_11590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND447_11610 PF00155 Aminotransferase class I and II ND447_11615 PF00578 AhpC/TSA family ND447_11645 PF00109 Beta-ketoacyl synthase, N-terminal domain ND447_11645 PF02801 Beta-ketoacyl synthase, C-terminal domain ND447_11650 PF01266 FAD dependent oxidoreductase ND447_11650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND447_11655 PF08891 YfcL protein ND447_11660 PF04315 Elongation factor P hydroxylase ND447_11665 PF01925 Sulfite exporter TauE/SafE ND447_11670 PF03411 Penicillin-insensitive murein endopeptidase ND447_11675 PF01264 Chorismate synthase ND447_11680 PF05175 Methyltransferase small domain ND447_11685 PF01713 Smr domain ND447_11690 PF00300 Histidine phosphatase superfamily (branch 1) ND447_11695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND447_11695 PF00378 Enoyl-CoA hydratase/isomerase ND447_11695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND447_11700 PF00108 Thiolase, N-terminal domain ND447_11700 PF02803 Thiolase, C-terminal domain ND447_11705 PF04175 Protein of unknown function (DUF406) ND447_11710 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND447_11715 PF04333 MlaA lipoprotein ND447_11720 PF03918 Cytochrome C biogenesis protein ND447_11725 PF03918 Cytochrome C biogenesis protein ND447_11730 PF08534 Redoxin ND447_11735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND447_11735 PF01578 Cytochrome C assembly protein ND447_11740 PF03100 CcmE ND447_11745 PF04995 Heme exporter protein D (CcmD) ND447_11750 PF01578 Cytochrome C assembly protein ND447_11755 PF03379 CcmB protein ND447_11760 PF00005 ABC transporter ND447_11770 PF13356 Arm DNA-binding domain ND447_11770 PF14659 Phage integrase, N-terminal SAM-like domain ND447_11770 PF00589 Phage integrase family ND447_11775 PF01119 DNA mismatch repair protein, C-terminal domain ND447_11775 PF08676 MutL C terminal dimerisation domain ND447_11830 PF08274 PhnA Zinc-Ribbon ND447_11830 PF03831 PhnA domain ND447_11835 PF13406 Transglycosylase SLT domain ND447_11850 PF01292 Prokaryotic cytochrome b561 ND447_11855 PF00155 Aminotransferase class I and II ND447_11860 PF07350 Protein of unknown function (DUF1479) ND447_11865 PF06580 Histidine kinase ND447_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_11865 PF07694 5TMR of 5TMR-LYT ND447_11870 PF00072 Response regulator receiver domain ND447_11870 PF04397 LytTr DNA-binding domain ND447_11875 PF07690 Major Facilitator Superfamily ND447_11880 PF02685 Glucokinase ND447_11890 PF03466 LysR substrate binding domain ND447_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_11900 PF01566 Natural resistance-associated macrophage protein ND447_11905 PF07670 Nucleoside recognition ND447_11905 PF07662 Na+ dependent nucleoside transporter C-terminus ND447_11905 PF01773 Na+ dependent nucleoside transporter N-terminus ND447_11940 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND447_11965 PF12843 Putative quorum-sensing-regulated virulence factor ND447_11970 PF12826 Helix-hairpin-helix motif ND447_11970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND447_11970 PF03120 NAD-dependent DNA ligase OB-fold domain ND447_11970 PF01653 NAD-dependent DNA ligase adenylation domain ND447_11970 PF00533 BRCA1 C Terminus (BRCT) domain ND447_11975 PF04354 ZipA, C-terminal FtsZ-binding domain ND447_11985 PF00291 Pyridoxal-phosphate dependent enzyme ND447_11990 PF00381 PTS HPr component phosphorylation site ND447_11995 PF05524 PEP-utilising enzyme, N-terminal ND447_11995 PF00391 PEP-utilising enzyme, mobile domain ND447_11995 PF02896 PEP-utilising enzyme, TIM barrel domain ND447_12000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND447_12005 PF00291 Pyridoxal-phosphate dependent enzyme ND447_12010 PF00005 ABC transporter ND447_12015 PF00528 Binding-protein-dependent transport system inner membrane component ND447_12020 PF00528 Binding-protein-dependent transport system inner membrane component ND447_12030 PF07690 Major Facilitator Superfamily ND447_12035 PF01418 Helix-turn-helix domain, rpiR family ND447_12035 PF01380 SIS domain ND447_12040 PF04074 YhcH/YjgK/YiaL ND447_12045 PF00480 ROK family ND447_12050 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND447_12055 PF00701 Dihydrodipicolinate synthetase family ND447_12060 PF04261 Dyp-type peroxidase family ND447_12065 PF06572 Protein of unknown function (DUF1131) ND447_12070 PF04076 Bacterial OB fold (BOF) protein ND447_12120 PF00583 Acetyltransferase (GNAT) family ND447_12125 PF01218 Coproporphyrinogen III oxidase ND447_12130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND447_12135 PF03949 Malic enzyme, NAD binding domain ND447_12135 PF01515 Phosphate acetyl/butaryl transferase ND447_12135 PF00390 Malic enzyme, N-terminal domain ND447_12140 PF00293 NUDIX domain ND447_12145 PF03264 NapC/NirT cytochrome c family, N-terminal region ND447_12150 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND447_12155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND447_12155 PF01568 Molydopterin dinucleotide binding domain ND447_12155 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND447_12155 PF00384 Molybdopterin oxidoreductase ND447_12160 PF03927 NapD protein ND447_12165 PF12800 4Fe-4S binding domain ND447_12165 PF00037 4Fe-4S binding domain ND447_12165 PF13187 4Fe-4S dicluster domain ND447_12170 PF00196 Bacterial regulatory proteins, luxR family ND447_12170 PF00072 Response regulator receiver domain ND447_12180 PF00873 AcrB/AcrD/AcrF family ND447_12190 PF01817 Chorismate mutase type II ND447_12195 PF03960 ArsC family ND447_12200 PF01546 Peptidase family M20/M25/M40 ND447_12200 PF07687 Peptidase dimerisation domain ND447_12205 PF02557 D-alanyl-D-alanine carboxypeptidase ND447_12210 PF13980 Uncharacterised protein family (UPF0370) ND447_12215 PF02230 Phospholipase/Carboxylesterase ND447_12220 PF08351 Domain of unknown function (DUF1726) ND447_12220 PF13718 GNAT acetyltransferase 2 ND447_12220 PF05127 Helicase ND447_12220 PF17176 tRNA-binding domain ND447_12225 PF04284 Protein of unknown function (DUF441) ND447_12230 PF01259 SAICAR synthetase ND447_12235 PF06804 NlpB/DapX lipoprotein ND447_12240 PF00701 Dihydrodipicolinate synthetase family ND447_12245 PF01842 ACT domain ND447_12250 PF00578 AhpC/TSA family ND447_12255 PF01594 AI-2E family transporter ND447_12260 PF01435 Peptidase family M48 ND447_12260 PF07720 Tetratricopeptide repeat ND447_12265 PF03960 ArsC family ND447_12270 PF00308 Bacterial dnaA protein ND447_12275 PF00860 Permease family ND447_12285 PF00586 AIR synthase related protein, N-terminal domain ND447_12285 PF02769 AIR synthase related protein, C-terminal domain ND447_12290 PF00551 Formyl transferase ND447_12295 PF13302 Acetyltransferase (GNAT) domain ND447_12300 PF00005 ABC transporter ND447_12305 PF00528 Binding-protein-dependent transport system inner membrane component ND447_12310 PF00528 Binding-protein-dependent transport system inner membrane component ND447_12315 PF13089 Polyphosphate kinase N-terminal domain ND447_12315 PF17941 Polyphosphate kinase C-terminal domain 1 ND447_12315 PF13090 Polyphosphate kinase C-terminal domain 2 ND447_12315 PF02503 Polyphosphate kinase middle domain ND447_12320 PF02541 Ppx/GppA phosphatase family ND447_12330 PF01769 Divalent cation transporter ND447_12330 PF00571 CBS domain ND447_12330 PF03448 MgtE intracellular N domain ND447_12335 PF00012 Hsp70 protein ND447_12345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_12345 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_12350 PF13954 PapC N-terminal domain ND447_12350 PF00577 Outer membrane usher protein ND447_12350 PF13953 PapC C-terminal domain ND447_12365 PF13533 Biotin-lipoyl like ND447_12370 PF00873 AcrB/AcrD/AcrF family ND447_12375 PF00873 AcrB/AcrD/AcrF family ND447_12380 PF07690 Major Facilitator Superfamily ND447_12385 PF00672 HAMP domain ND447_12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_12385 PF00512 His Kinase A (phospho-acceptor) domain ND447_12390 PF00072 Response regulator receiver domain ND447_12390 PF00486 Transcriptional regulatory protein, C terminal ND447_12395 PF07411 Domain of unknown function (DUF1508) ND447_12400 PF16325 Peptidase family U32 C-terminal domain ND447_12400 PF01136 Peptidase family U32 ND447_12405 PF00781 Diacylglycerol kinase catalytic domain ND447_12420 PF08543 Phosphomethylpyrimidine kinase ND447_12435 PF00117 Glutamine amidotransferase class-I ND447_12435 PF00958 GMP synthase C terminal domain ND447_12435 PF02540 NAD synthase ND447_12440 PF00571 CBS domain ND447_12440 PF00478 IMP dehydrogenase / GMP reductase domain ND447_12445 PF13742 OB-fold nucleic acid binding domain ND447_12445 PF02601 Exonuclease VII, large subunit ND447_12450 PF07191 zinc-ribbons ND447_12455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND447_12455 PF01926 50S ribosome-binding GTPase ND447_12460 PF13360 PQQ-like domain ND447_12465 PF09976 Tetratricopeptide repeat-like domain ND447_12470 PF13393 Histidyl-tRNA synthetase ND447_12470 PF03129 Anticodon binding domain ND447_12475 PF04551 GcpE protein ND447_12480 PF13464 Domain of unknown function (DUF4115) ND447_12490 PF04055 Radical SAM superfamily ND447_12495 PF00334 Nucleoside diphosphate kinase ND447_12505 PF00905 Penicillin binding protein transpeptidase domain ND447_12505 PF06832 Penicillin-Binding Protein C-terminus Family ND447_12505 PF00912 Transglycosylase ND447_12510 PF07703 Alpha-2-macroglobulin bait region domain ND447_12510 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND447_12510 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND447_12510 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND447_12510 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND447_12510 PF17962 Bacterial macroglobulin domain 6 ND447_12510 PF01835 MG2 domain ND447_12510 PF07678 A-macroglobulin TED domain ND447_12510 PF00207 Alpha-2-macroglobulin family ND447_12515 PF14581 SseB protein C-terminal domain ND447_12515 PF07179 SseB protein N-terminal domain ND447_12520 PF12404 Peptidase ND447_12520 PF00883 Cytosol aminopeptidase family, catalytic domain ND447_12525 PF04384 Iron-sulphur cluster assembly ND447_12530 PF00111 2Fe-2S iron-sulfur cluster binding domain ND447_12535 PF00012 Hsp70 protein ND447_12540 PF07743 HSCB C-terminal oligomerisation domain ND447_12540 PF00226 DnaJ domain ND447_12545 PF01521 Iron-sulphur cluster biosynthesis ND447_12550 PF01592 NifU-like N terminal domain ND447_12555 PF00266 Aminotransferase class-V ND447_12560 PF02082 Transcriptional regulator ND447_12565 PF00588 SpoU rRNA Methylase family ND447_12570 PF00459 Inositol monophosphatase family ND447_12575 PF03824 High-affinity nickel-transport protein ND447_12580 PF06226 Protein of unknown function (DUF1007) ND447_12585 PF00874 PRD domain ND447_12590 PF12832 MFS_1 like family ND447_12595 PF00464 Serine hydroxymethyltransferase ND447_12600 PF00175 Oxidoreductase NAD-binding domain ND447_12600 PF00970 Oxidoreductase FAD-binding domain ND447_12600 PF00042 Globin ND447_12605 PF14502 Helix-turn-helix domain ND447_12605 PF14503 YhfZ C-terminal domain ND447_12615 PF01168 Alanine racemase, N-terminal domain ND447_12620 PF02126 Phosphotriesterase family ND447_12625 PF10941 Protein of unknown function DUF2620 ND447_12630 PF10797 Protein of unknown function ND447_12635 PF00543 Nitrogen regulatory protein P-II ND447_12640 PF00795 Carbon-nitrogen hydrolase ND447_12640 PF02540 NAD synthase ND447_12645 PF00158 Sigma-54 interaction domain ND447_12645 PF00072 Response regulator receiver domain ND447_12650 PF13942 YfhG lipoprotein ND447_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_12655 PF00512 His Kinase A (phospho-acceptor) domain ND447_12665 PF02769 AIR synthase related protein, C-terminal domain ND447_12665 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND447_12665 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND447_12670 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_12670 PF01464 Transglycosylase SLT domain ND447_12675 PF14437 MafB19-like deaminase ND447_12685 PF02378 Phosphotransferase system, EIIC ND447_12685 PF00367 phosphotransferase system, EIIB ND447_12690 PF01380 SIS domain ND447_12695 PF01380 SIS domain ND447_12695 PF01418 Helix-turn-helix domain, rpiR family ND447_12700 PF12838 4Fe-4S dicluster domain ND447_12705 PF01648 4'-phosphopantetheinyl transferase superfamily ND447_12710 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND447_12715 PF02565 Recombination protein O C terminal ND447_12715 PF11967 Recombination protein O N terminal ND447_12720 PF07650 KH domain ND447_12720 PF01926 50S ribosome-binding GTPase ND447_12725 PF00035 Double-stranded RNA binding motif ND447_12725 PF14622 Ribonuclease-III-like ND447_12730 PF10502 Signal peptidase, peptidase S26 ND447_12735 PF03144 Elongation factor Tu domain 2 ND447_12735 PF06421 GTP-binding protein LepA C-terminus ND447_12735 PF00679 Elongation factor G C-terminus ND447_12735 PF00009 Elongation factor Tu GTP binding domain ND447_12745 PF17188 MucB/RseB C-terminal domain ND447_12745 PF03888 MucB/RseB N-terminal domain ND447_12750 PF03872 Anti sigma-E protein RseA, N-terminal domain ND447_12750 PF03873 Anti sigma-E protein RseA, C-terminal domain ND447_12755 PF08281 Sigma-70, region 4 ND447_12755 PF04542 Sigma-70 region 2 ND447_12760 PF00890 FAD binding domain ND447_12760 PF02910 Fumarate reductase flavoprotein C-term ND447_12765 PF05175 Methyltransferase small domain ND447_12770 PF00271 Helicase conserved C-terminal domain ND447_12770 PF00270 DEAD/DEAH box helicase ND447_12775 PF12796 Ankyrin repeats (3 copies) ND447_12785 PF01228 Glycine radical ND447_12790 PF03167 Uracil DNA glycosylase superfamily ND447_12795 PF01025 GrpE ND447_12800 PF01513 ATP-NAD kinase ND447_12805 PF02463 RecF/RecN/SMC N terminal domain ND447_12810 PF04355 SmpA / OmlA family ND447_12815 PF03658 RnfH family Ubiquitin ND447_12820 PF03364 Polyketide cyclase / dehydrase and lipid transport ND447_12825 PF01668 SmpB protein ND447_12835 PF13356 Arm DNA-binding domain ND447_12835 PF00589 Phage integrase family ND447_12865 PF01926 50S ribosome-binding GTPase ND447_12870 PF08220 DeoR-like helix-turn-helix domain ND447_12870 PF13280 WYL domain ND447_12895 PF06067 Domain of unknown function (DUF932) ND447_12900 PF03230 Antirestriction protein ND447_12905 PF04002 RadC-like JAB domain ND447_12910 PF06174 Protein of unknown function (DUF987) ND447_12915 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND447_12920 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND447_12960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_12960 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_12965 PF13953 PapC C-terminal domain ND447_12965 PF13954 PapC N-terminal domain ND447_12965 PF00577 Outer membrane usher protein ND447_12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_12990 PF03466 LysR substrate binding domain ND447_13005 PF01527 Transposase ND447_13015 PF18413 Neuraminidase-like domain ND447_13015 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND447_13015 PF18413 Neuraminidase-like domain ND447_13015 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ND447_13025 PF03534 Salmonella virulence plasmid 65kDa B protein ND447_13025 PF12255 Insecticide toxin TcdB middle/C-terminal region ND447_13025 PF12256 Insecticide toxin TcdB middle/N-terminal region ND447_13030 PF14431 YwqJ-like deaminase ND447_13030 PF18807 Tripartite Tc toxins repeat ND447_13060 PF01380 SIS domain ND447_13060 PF00571 CBS domain ND447_13065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND447_13065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND447_13075 PF02653 Branched-chain amino acid transport system / permease component ND447_13080 PF00005 ABC transporter ND447_13090 PF00561 alpha/beta hydrolase fold ND447_13095 PF03466 LysR substrate binding domain ND447_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_13100 PF02652 L-lactate permease ND447_13105 PF01070 FMN-dependent dehydrogenase ND447_13110 PF06039 Malate:quinone oxidoreductase (Mqo) ND447_13115 PF00313 'Cold-shock' DNA-binding domain ND447_13125 PF06711 Protein of unknown function (DUF1198) ND447_13130 PF09400 Protein of unknown function (DUF2002) ND447_13145 PF07972 NrdI Flavodoxin like ND447_13150 PF02867 Ribonucleotide reductase, barrel domain ND447_13150 PF00317 Ribonucleotide reductase, all-alpha domain ND447_13150 PF08343 Ribonucleotide reductase N-terminal ND447_13155 PF00268 Ribonucleotide reductase, small chain ND447_13160 PF00005 ABC transporter ND447_13160 PF00571 CBS domain ND447_13165 PF00528 Binding-protein-dependent transport system inner membrane component ND447_13170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND447_13180 PF07690 Major Facilitator Superfamily ND447_13185 PF01047 MarR family ND447_13195 PF00529 HlyD membrane-fusion protein of T1SS ND447_13195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND447_13200 PF07690 Major Facilitator Superfamily ND447_13205 PF00588 SpoU rRNA Methylase family ND447_13205 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND447_13210 PF00085 Thioredoxin ND447_13215 PF03942 DTW domain ND447_13220 PF00583 Acetyltransferase (GNAT) family ND447_13220 PF13380 CoA binding domain ND447_13220 PF13607 Succinyl-CoA ligase like flavodoxin domain ND447_13225 PF13091 PLD-like domain ND447_13230 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND447_13260 PF00005 ABC transporter ND447_13260 PF09383 NIL domain ND447_13265 PF00528 Binding-protein-dependent transport system inner membrane component ND447_13270 PF03180 NLPA lipoprotein ND447_13275 PF16358 RcsF lipoprotein ND447_13280 PF01980 tRNA-methyltransferase O ND447_13280 PF18389 TrmO C-terminal domain ND447_13285 PF03129 Anticodon binding domain ND447_13285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND447_13285 PF04073 Aminoacyl-tRNA editing domain ND447_13290 PF17185 NlpE C-terminal OB domain ND447_13290 PF04170 NlpE N-terminal domain ND447_13295 PF00472 RF-1 domain ND447_13300 PF07152 YaeQ protein ND447_13305 PF06786 Uncharacterised protein family (UPF0253) ND447_13310 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND447_13315 PF00034 Cytochrome c ND447_13320 PF09179 TilS substrate binding domain ND447_13320 PF01171 PP-loop family ND447_13320 PF11734 TilS substrate C-terminal domain ND447_13325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND447_13340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND447_13345 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND447_13345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND447_13345 PF14579 Helix-hairpin-helix motif ND447_13345 PF02811 PHP domain ND447_13345 PF01336 OB-fold nucleic acid binding domain ND447_13350 PF01351 Ribonuclease HII ND447_13355 PF02684 Lipid-A-disaccharide synthetase ND447_13360 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_13360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND447_13365 PF07977 FabA-like domain ND447_13370 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_13370 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND447_13375 PF03938 Outer membrane protein (OmpH-like) ND447_13380 PF01103 Surface antigen ND447_13380 PF07244 Surface antigen variable number repeat ND447_13385 PF17820 PDZ domain ND447_13385 PF02163 Peptidase family M50 ND447_13395 PF01255 Putative undecaprenyl diphosphate synthase ND447_13400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND447_13400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND447_13400 PF13288 DXP reductoisomerase C-terminal domain ND447_13405 PF01765 Ribosome recycling factor ND447_13410 PF00696 Amino acid kinase family ND447_13415 PF00889 Elongation factor TS ND447_13420 PF00318 Ribosomal protein S2 ND447_13425 PF00557 Metallopeptidase family M24 ND447_13430 PF01842 ACT domain ND447_13430 PF01966 HD domain ND447_13430 PF01909 Nucleotidyltransferase domain ND447_13430 PF08335 GlnD PII-uridylyltransferase ND447_13435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND447_13435 PF14602 Hexapeptide repeat of succinyl-transferase ND447_13435 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_13440 PF11944 Protein of unknown function (DUF3461) ND447_13445 PF00258 Flavodoxin ND447_13450 PF00849 RNA pseudouridylate synthase ND447_13455 PF04287 tRNA pseudouridine synthase C ND447_13460 PF07348 Syd protein (SUKH-2) ND447_13465 PF14489 QueF-like protein ND447_13465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND447_13470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND447_13470 PF11892 Domain of unknown function (DUF3412) ND447_13470 PF03641 Possible lysine decarboxylase ND447_13475 PF01367 5'-3' exonuclease, C-terminal SAM fold ND447_13475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND447_13480 PF18125 RlmM ferredoxin-like domain ND447_13480 PF01728 FtsJ-like methyltransferase ND447_13485 PF04241 Protein of unknown function (DUF423) ND447_13490 PF03466 LysR substrate binding domain ND447_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_13495 PF06004 Bacterial protein of unknown function (DUF903) ND447_13500 PF00266 Aminotransferase class-V ND447_13505 PF02657 Fe-S metabolism associated domain ND447_13510 PF00899 ThiF family ND447_13515 PF03562 MltA specific insert domain ND447_13515 PF06725 3D domain ND447_13535 PF11741 AMIN domain ND447_13535 PF01520 N-acetylmuramoyl-L-alanine amidase ND447_13540 PF00696 Amino acid kinase family ND447_13540 PF00583 Acetyltransferase (GNAT) family ND447_13545 PF13538 UvrD-like helicase C-terminal domain ND447_13550 PF13361 UvrD-like helicase C-terminal domain ND447_13550 PF12705 PD-(D/E)XK nuclease superfamily ND447_13550 PF00580 UvrD/REP helicase N-terminal domain ND447_13555 PF16187 Middle or third domain of peptidase_M16 ND447_13555 PF00675 Insulinase (Peptidase family M16) ND447_13555 PF05193 Peptidase M16 inactive domain ND447_13560 PF17946 RecC C-terminal domain ND447_13565 PF07963 Prokaryotic N-terminal methylation motif ND447_13565 PF12528 Type II secretion prepilin peptidase dependent protein C ND447_13580 PF07963 Prokaryotic N-terminal methylation motif ND447_13580 PF00114 Pilin (bacterial filament) ND447_13585 PF00303 Thymidylate synthase ND447_13590 PF01790 Prolipoprotein diacylglyceryl transferase ND447_13595 PF01590 GAF domain ND447_13595 PF05524 PEP-utilising enzyme, N-terminal ND447_13595 PF00391 PEP-utilising enzyme, mobile domain ND447_13595 PF02896 PEP-utilising enzyme, TIM barrel domain ND447_13600 PF00293 NUDIX domain ND447_13605 PF02976 DNA mismatch repair enzyme MutH ND447_13610 PF03741 Integral membrane protein TerC family ND447_13615 PF00248 Aldo/keto reductase family ND447_13620 PF07690 Major Facilitator Superfamily ND447_13625 PF01553 Acyltransferase ND447_13625 PF00501 AMP-binding enzyme ND447_13625 PF13193 AMP-binding enzyme C-terminal domain ND447_13635 PF00356 Bacterial regulatory proteins, lacI family ND447_13640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND447_13640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND447_13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_13645 PF03466 LysR substrate binding domain ND447_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_13650 PF03466 LysR substrate binding domain ND447_13695 PF11612 Type II secretion system (T2SS), protein J ND447_13695 PF07963 Prokaryotic N-terminal methylation motif ND447_13700 PF07963 Prokaryotic N-terminal methylation motif ND447_13700 PF02501 Type II secretion system (T2SS), protein I ND447_13705 PF12019 Type II transport protein GspH ND447_13705 PF07963 Prokaryotic N-terminal methylation motif ND447_13710 PF07963 Prokaryotic N-terminal methylation motif ND447_13710 PF08334 Type II secretion system (T2SS), protein G ND447_13715 PF00482 Type II secretion system (T2SS), protein F ND447_13755 PF00005 ABC transporter ND447_13760 PF02405 Permease MlaE ND447_13770 PF00152 tRNA synthetases class II (D, K and N) ND447_13770 PF01336 OB-fold nucleic acid binding domain ND447_13780 PF17768 RecJ OB domain ND447_13780 PF01368 DHH family ND447_13780 PF02272 DHHA1 domain ND447_13785 PF10411 Disulfide bond isomerase protein N-terminus ND447_13785 PF13098 Thioredoxin-like domain ND447_13790 PF02899 Phage integrase, N-terminal SAM-like domain ND447_13790 PF00589 Phage integrase family ND447_13795 PF00258 Flavodoxin ND447_13800 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND447_13805 PF03937 Flavinator of succinate dehydrogenase ND447_13810 PF01571 Aminomethyltransferase folate-binding domain ND447_13815 PF03006 Haemolysin-III related ND447_13825 PF02347 Glycine cleavage system P-protein ND447_13830 PF01597 Glycine cleavage H-protein ND447_13835 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND447_13835 PF01571 Aminomethyltransferase folate-binding domain ND447_13840 PF01494 FAD binding domain ND447_13845 PF01494 FAD binding domain ND447_13850 PF00557 Metallopeptidase family M24 ND447_13850 PF05195 Aminopeptidase P, N-terminal domain ND447_13855 PF03695 Uncharacterised protein family (UPF0149) ND447_13860 PF05164 Cell division protein ZapA ND447_13870 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND447_13875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND447_13875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND447_13875 PF01842 ACT domain ND447_13880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND447_13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_13885 PF03466 LysR substrate binding domain ND447_13890 PF04402 Protein of unknown function (DUF541) ND447_13895 PF01810 LysE type translocator ND447_13900 PF00924 Mechanosensitive ion channel ND447_13900 PF05552 Conserved TM helix ND447_13905 PF01116 Fructose-bisphosphate aldolase class-II ND447_13910 PF00162 Phosphoglycerate kinase ND447_13915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND447_13915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND447_13920 PF00456 Transketolase, thiamine diphosphate binding domain ND447_13920 PF02780 Transketolase, C-terminal domain ND447_13920 PF02779 Transketolase, pyrimidine binding domain ND447_13930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND447_13930 PF17944 Arginine decarboxylase C-terminal helical extension ND447_13930 PF17810 Arginine decarboxylase helical bundle domain ND447_13935 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND447_13935 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND447_13935 PF02772 S-adenosylmethionine synthetase, central domain ND447_13945 PF04143 Sulphur transport ND447_13955 PF17283 SprT-like zinc ribbon domain ND447_13955 PF10263 SprT-like family ND447_13960 PF04231 Endonuclease I ND447_13965 PF04452 RNA methyltransferase ND447_13970 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND447_13970 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND447_13975 PF02622 Uncharacterized ACR, COG1678 ND447_13980 PF03652 Holliday junction resolvase ND447_13985 PF00795 Carbon-nitrogen hydrolase ND447_13990 PF04371 Porphyromonas-type peptidyl-arginine deiminase ND447_13995 PF00437 Type II/IV secretion system protein ND447_14000 PF01168 Alanine racemase, N-terminal domain ND447_14005 PF03807 NADP oxidoreductase coenzyme F420-dependent ND447_14005 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND447_14010 PF02325 YGGT family ND447_14015 PF02594 Uncharacterised ACR, YggU family COG1872 ND447_14020 PF01725 Ham1 family ND447_14025 PF06969 HemN C-terminal domain ND447_14025 PF04055 Radical SAM superfamily ND447_14030 PF11101 Protein of unknown function (DUF2884) ND447_14035 PF04960 Glutaminase ND447_14040 PF04320 Protein with unknown function (DUF469) ND447_14045 PF02390 Putative methyltransferase ND447_14050 PF14815 NUDIX domain ND447_14050 PF10576 Iron-sulfur binding domain of endonuclease III ND447_14050 PF00730 HhH-GPD superfamily base excision DNA repair protein ND447_14050 PF00633 Helix-hairpin-helix motif ND447_14055 PF04362 Bacterial Fe(2+) trafficking ND447_14060 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND447_14060 PF01464 Transglycosylase SLT domain ND447_14105 PF00294 pfkB family carbohydrate kinase ND447_14110 PF01228 Glycine radical ND447_14110 PF02901 Pyruvate formate lyase-like ND447_14115 PF00871 Acetokinase family ND447_14120 PF01490 Transmembrane amino acid transporter protein ND447_14125 PF00291 Pyridoxal-phosphate dependent enzyme ND447_14130 PF00668 Condensation domain ND447_14130 PF13193 AMP-binding enzyme C-terminal domain ND447_14130 PF00501 AMP-binding enzyme ND447_14130 PF00975 Thioesterase domain ND447_14130 PF00550 Phosphopantetheine attachment site ND447_14140 PF00857 Isochorismatase family ND447_14140 PF00550 Phosphopantetheine attachment site ND447_14145 PF00501 AMP-binding enzyme ND447_14145 PF13193 AMP-binding enzyme C-terminal domain ND447_14150 PF00425 chorismate binding enzyme ND447_14155 PF01497 Periplasmic binding protein ND447_14160 PF05977 Transmembrane secretion effector ND447_14165 PF01032 FecCD transport family ND447_14170 PF01032 FecCD transport family ND447_14175 PF00005 ABC transporter ND447_14185 PF00501 AMP-binding enzyme ND447_14185 PF13193 AMP-binding enzyme C-terminal domain ND447_14185 PF00668 Condensation domain ND447_14185 PF00550 Phosphopantetheine attachment site ND447_14185 PF00975 Thioesterase domain ND447_14190 PF03621 MbtH-like protein ND447_14195 PF00756 Putative esterase ND447_14195 PF11806 Domain of unknown function (DUF3327) ND447_14200 PF07715 TonB-dependent Receptor Plug Domain ND447_14200 PF00593 TonB dependent receptor ND447_14205 PF08501 Shikimate dehydrogenase substrate binding domain ND447_14280 PF02472 Biopolymer transport protein ExbD/TolR ND447_14285 PF01618 MotA/TolQ/ExbB proton channel family ND447_14290 PF01053 Cys/Met metabolism PLP-dependent enzyme ND447_14295 PF09335 SNARE associated Golgi protein ND447_14300 PF06719 AraC-type transcriptional regulator N-terminus ND447_14300 PF12833 Helix-turn-helix domain ND447_14305 PF00465 Iron-containing alcohol dehydrogenase ND447_14310 PF00248 Aldo/keto reductase family ND447_14315 PF11842 Domain of unknown function (DUF3362) ND447_14315 PF04055 Radical SAM superfamily ND447_14315 PF08497 Radical SAM N-terminal ND447_14320 PF07731 Multicopper oxidase ND447_14320 PF07732 Multicopper oxidase ND447_14325 PF01553 Acyltransferase ND447_14330 PF00521 DNA gyrase/topoisomerase IV, subunit A ND447_14330 PF03989 DNA gyrase C-terminal domain, beta-propeller ND447_14335 PF02525 Flavodoxin-like fold ND447_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_14340 PF03466 LysR substrate binding domain ND447_14345 PF00986 DNA gyrase B subunit, carboxyl terminus ND447_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_14345 PF01751 Toprim domain ND447_14345 PF00204 DNA gyrase B ND447_14350 PF05728 Uncharacterised protein family (UPF0227) ND447_14355 PF00149 Calcineurin-like phosphoesterase ND447_14360 PF06853 Protein of unknown function (DUF1249) ND447_14365 PF00293 NUDIX domain ND447_14370 PF02321 Outer membrane efflux protein ND447_14375 PF06693 Protein of unknown function (DUF1190) ND447_14380 PF03738 Glutathionylspermidine synthase preATP-grasp ND447_14385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND447_14390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND447_14395 PF04380 Membrane fusogenic activity ND447_14405 PF00294 pfkB family carbohydrate kinase ND447_14405 PF01467 Cytidylyltransferase-like ND447_14410 PF03710 Glutamate-ammonia ligase adenylyltransferase ND447_14410 PF08335 GlnD PII-uridylyltransferase ND447_14415 PF01928 CYTH domain ND447_14420 PF08239 Bacterial SH3 domain ND447_14425 PF01966 HD domain ND447_14425 PF01743 Poly A polymerase head domain ND447_14425 PF12627 Probable RNA and SrmB- binding site of polymerase A ND447_14430 PF02673 Bacitracin resistance protein BacA ND447_14435 PF02152 Dihydroneopterin aldolase ND447_14440 PF02660 Glycerol-3-phosphate acyltransferase ND447_14445 PF00814 Glycoprotease family ND447_14450 PF01165 Ribosomal protein S21 ND447_14455 PF01807 CHC2 zinc finger ND447_14455 PF10410 DnaB-helicase binding domain of primase ND447_14455 PF08278 DNA primase DnaG DnaB-binding ND447_14455 PF08275 DNA primase catalytic core, N-terminal domain ND447_14460 PF03979 Sigma-70 factor, region 1.1 ND447_14460 PF04542 Sigma-70 region 2 ND447_14460 PF00140 Sigma-70 factor, region 1.2 ND447_14460 PF04546 Sigma-70, non-essential region ND447_14460 PF04539 Sigma-70 region 3 ND447_14460 PF04545 Sigma-70, region 4 ND447_14485 PF00106 short chain dehydrogenase ND447_14510 PF08241 Methyltransferase domain ND447_14515 PF00535 Glycosyl transferase family 2 ND447_14550 PF13018 Extended Signal Peptide of Type V secretion system ND447_14550 PF13332 Hemagglutinin repeat ND447_14550 PF04829 Pre-toxin domain with VENN motif ND447_14550 PF05860 haemagglutination activity domain ND447_14555 PF13018 Extended Signal Peptide of Type V secretion system ND447_14555 PF13332 Hemagglutinin repeat ND447_14555 PF05860 haemagglutination activity domain ND447_14555 PF04829 Pre-toxin domain with VENN motif ND447_14565 PF08479 POTRA domain, ShlB-type ND447_14565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND447_14565 PF17287 POTRA domain ND447_14570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND447_14570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_14575 PF05175 Methyltransferase small domain ND447_14585 PF01863 Protein of unknown function DUF45 ND447_14590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND447_14595 PF03741 Integral membrane protein TerC family ND447_14600 PF00375 Sodium:dicarboxylate symporter family ND447_14605 PF10688 Bacterial inner membrane protein ND447_14610 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND447_14610 PF08666 SAF domain ND447_14615 PF01232 Mannitol dehydrogenase Rossmann domain ND447_14615 PF08125 Mannitol dehydrogenase C-terminal domain ND447_14620 PF02614 Glucuronate isomerase ND447_14625 PF07690 Major Facilitator Superfamily ND447_14630 PF07729 FCD domain ND447_14630 PF00392 Bacterial regulatory proteins, gntR family ND447_14640 PF09335 SNARE associated Golgi protein ND447_14645 PF13721 SecD export protein N-terminal TM region ND447_14655 PF05957 Bacterial protein of unknown function (DUF883) ND447_14660 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND447_14665 PF13997 YqjK-like protein ND447_14670 PF07681 DoxX ND447_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_14675 PF03466 LysR substrate binding domain ND447_14680 PF02678 Pirin ND447_14680 PF17954 Quercetinase C-terminal cupin domain ND447_14695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND447_14700 PF04348 LppC putative lipoprotein ND447_14705 PF02021 Uncharacterised protein family UPF0102 ND447_14710 PF13580 SIS domain ND447_14715 PF04972 BON domain ND447_14720 PF00912 Transglycosylase ND447_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_14730 PF00072 Response regulator receiver domain ND447_14730 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND447_14730 PF01627 Hpt domain ND447_14730 PF00989 PAS fold ND447_14730 PF00512 His Kinase A (phospho-acceptor) domain ND447_14735 PF04055 Radical SAM superfamily ND447_14735 PF16199 Radical_SAM C-terminal domain ND447_14740 PF00310 Glutamine amidotransferases class-II ND447_14740 PF04898 Glutamate synthase central domain ND447_14740 PF01645 Conserved region in glutamate synthase ND447_14740 PF01493 GXGXG motif ND447_14745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND447_14745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_14755 PF04386 Stringent starvation protein B ND447_14760 PF00043 Glutathione S-transferase, C-terminal domain ND447_14760 PF02798 Glutathione S-transferase, N-terminal domain ND447_14765 PF00380 Ribosomal protein S9/S16 ND447_14770 PF00572 Ribosomal protein L13 ND447_14775 PF03969 AFG1-like ATPase ND447_14780 PF06295 Protein of unknown function (DUF1043) ND447_14785 PF00595 PDZ domain ND447_14785 PF13180 PDZ domain ND447_14790 PF13180 PDZ domain ND447_14795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND447_14800 PF01722 BolA-like protein ND447_14805 PF13466 STAS domain ND447_14810 PF05494 MlaC protein ND447_14815 PF02470 MlaD protein ND447_14820 PF02405 Permease MlaE ND447_14825 PF00005 ABC transporter ND447_14830 PF01699 Sodium/calcium exchanger protein ND447_14835 PF00571 CBS domain ND447_14835 PF01380 SIS domain ND447_14845 PF06835 Lipopolysaccharide-assembly, LptC-related ND447_14850 PF03968 OstA-like protein ND447_14855 PF00005 ABC transporter ND447_14855 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND447_14860 PF04552 Sigma-54, DNA binding domain ND447_14860 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND447_14860 PF04963 Sigma-54 factor, core binding domain ND447_14865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND447_14870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND447_14875 PF03668 P-loop ATPase protein family ND447_14880 PF00381 PTS HPr component phosphorylation site ND447_14885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND447_14885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND447_14890 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND447_14890 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND447_14895 PF01042 Endoribonuclease L-PSP ND447_14900 PF00128 Alpha amylase, catalytic domain ND447_14900 PF11941 Domain of unknown function (DUF3459) ND447_14905 PF02378 Phosphotransferase system, EIIC ND447_14905 PF00367 phosphotransferase system, EIIB ND447_14910 PF00356 Bacterial regulatory proteins, lacI family ND447_14915 PF00690 Cation transporter/ATPase, N-terminus ND447_14915 PF00689 Cation transporting ATPase, C-terminus ND447_14925 PF01272 Transcription elongation factor, GreA/GreB, C-term ND447_14925 PF14760 Rnk N-terminus ND447_14930 PF07361 Cytochrome b562 ND447_14935 PF01523 Putative modulator of DNA gyrase ND447_14940 PF04751 Protein of unknown function (DUF615) ND447_14945 PF01337 Barstar (barnase inhibitor) ND447_14950 PF00545 ribonuclease ND447_14955 PF00171 Aldehyde dehydrogenase family ND447_14960 PF04632 Fusaric acid resistance protein family ND447_14965 PF13533 Biotin-lipoyl like ND447_14970 PF07869 Protein of unknown function (DUF1656) ND447_14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_14975 PF03466 LysR substrate binding domain ND447_14980 PF01523 Putative modulator of DNA gyrase ND447_14985 PF00795 Carbon-nitrogen hydrolase ND447_14990 PF13502 AsmA-like C-terminal region ND447_14990 PF13116 Protein of unknown function ND447_14995 PF10150 Ribonuclease E/G family ND447_14995 PF00575 S1 RNA binding domain ND447_15000 PF02545 Maf-like protein ND447_15005 PF04093 rod shape-determining protein MreD ND447_15010 PF04085 rod shape-determining protein MreC ND447_15020 PF00563 EAL domain ND447_15020 PF17157 Gammaproteobacterial periplasmic sensor domain ND447_15020 PF00990 Diguanylate cyclase, GGDEF domain ND447_15025 PF08240 Alcohol dehydrogenase GroES-like domain ND447_15025 PF00107 Zinc-binding dehydrogenase ND447_15030 PF00174 Oxidoreductase molybdopterin binding domain ND447_15035 PF01794 Ferric reductase like transmembrane component ND447_15040 PF01220 Dehydroquinase class II ND447_15045 PF00364 Biotin-requiring enzyme ND447_15050 PF02785 Biotin carboxylase C-terminal domain ND447_15050 PF00289 Biotin carboxylase, N-terminal domain ND447_15050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND447_15055 PF06196 Protein of unknown function (DUF997) ND447_15060 PF00474 Sodium:solute symporter family ND447_15070 PF01207 Dihydrouridine synthase (Dus) ND447_15075 PF02954 Bacterial regulatory protein, Fis family ND447_15085 PF03279 Bacterial lipid A biosynthesis acyltransferase ND447_15090 PF00484 Carbonic anhydrase ND447_15095 PF04172 LrgB-like family ND447_15100 PF03788 LrgA family ND447_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_15105 PF03466 LysR substrate binding domain ND447_15110 PF00999 Sodium/hydrogen exchanger family ND447_15115 PF00860 Permease family ND447_15125 PF00436 Single-strand binding protein family ND447_15130 PF17755 UvrA DNA-binding domain ND447_15130 PF17760 UvrA interaction domain ND447_15130 PF00005 ABC transporter ND447_15135 PF04237 YjbR ND447_15140 PF00155 Aminotransferase class I and II ND447_15145 PF01168 Alanine racemase, N-terminal domain ND447_15145 PF00842 Alanine racemase, C-terminal domain ND447_15150 PF00772 DnaB-like helicase N terminal domain ND447_15150 PF03796 DnaB-like helicase C terminal domain ND447_15155 PF08240 Alcohol dehydrogenase GroES-like domain ND447_15155 PF00107 Zinc-binding dehydrogenase ND447_15160 PF09583 Phage shock protein G (Phageshock_PspG) ND447_15165 PF01207 Dihydrouridine synthase (Dus) ND447_15170 PF01475 Ferric uptake regulator family ND447_15175 PF01726 LexA DNA binding domain ND447_15175 PF00717 Peptidase S24-like ND447_15180 PF01219 Prokaryotic diacylglycerol kinase ND447_15185 PF01553 Acyltransferase ND447_15190 PF01040 UbiA prenyltransferase family ND447_15195 PF04345 Chorismate lyase ND447_15200 PF07148 Maltose operon periplasmic protein precursor (MalM) ND447_15205 PF02264 LamB porin ND447_15210 PF00005 ABC transporter ND447_15210 PF17912 MalK OB fold domain ND447_15220 PF01547 Bacterial extracellular solute-binding protein ND447_15225 PF00528 Binding-protein-dependent transport system inner membrane component ND447_15225 PF14785 Maltose transport system permease protein MalF P2 domain ND447_15230 PF00528 Binding-protein-dependent transport system inner membrane component ND447_15235 PF06146 Phosphate-starvation-inducible E ND447_15240 PF00342 Phosphoglucose isomerase ND447_15245 PF01842 ACT domain ND447_15245 PF00696 Amino acid kinase family ND447_15250 PF08479 POTRA domain, ShlB-type ND447_15250 PF17287 POTRA domain ND447_15250 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND447_15255 PF13332 Hemagglutinin repeat ND447_15255 PF05860 haemagglutination activity domain ND447_15260 PF00872 Transposase, Mutator family ND447_15265 PF09134 Invasin, domain 3 ND447_15265 PF07979 Intimin C-type lectin domain ND447_15265 PF11924 Inverse autotransporter, beta-domain ND447_15265 PF02369 Bacterial Ig-like domain (group 1) ND447_15270 PF00872 Transposase, Mutator family ND447_15275 PF09134 Invasin, domain 3 ND447_15275 PF07979 Intimin C-type lectin domain ND447_15275 PF11924 Inverse autotransporter, beta-domain ND447_15275 PF02369 Bacterial Ig-like domain (group 1) ND447_15285 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND447_15290 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND447_15295 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND447_15305 PF01434 Peptidase family M41 ND447_15305 PF17862 AAA+ lid domain ND447_15305 PF00004 ATPase family associated with various cellular activities (AAA) ND447_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_15385 PF03466 LysR substrate binding domain ND447_15405 PF02310 B12 binding domain ND447_15405 PF02607 B12 binding domain ND447_15405 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND447_15405 PF00809 Pterin binding enzyme ND447_15405 PF02574 Homocysteine S-methyltransferase ND447_15410 PF01614 Bacterial transcriptional regulator ND447_15410 PF09339 IclR helix-turn-helix domain ND447_15415 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND447_15420 PF00463 Isocitrate lyase family ND447_15425 PF01274 Malate synthase ND447_15430 PF04204 Homoserine O-succinyltransferase ND447_15465 PF02142 MGS-like domain ND447_15465 PF01808 AICARFT/IMPCHase bienzyme ND447_15470 PF02844 Phosphoribosylglycinamide synthetase, N domain ND447_15470 PF02843 Phosphoribosylglycinamide synthetase, C domain ND447_15470 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND447_15475 PF07356 Protein of unknown function (DUF1481) ND447_15480 PF00216 Bacterial DNA-binding protein ND447_15485 PF04222 Protein of unknown function (DUF416) ND447_15490 PF04493 Endonuclease V ND447_15495 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND447_15500 PF09297 NADH pyrophosphatase zinc ribbon domain ND447_15500 PF00293 NUDIX domain ND447_15505 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND447_15510 PF01964 Radical SAM ThiC family ND447_15510 PF13667 ThiC-associated domain ND447_15515 PF02581 Thiamine monophosphate synthase ND447_15520 PF00899 ThiF family ND447_15525 PF02597 ThiS family ND447_15530 PF05690 Thiazole biosynthesis protein ThiG ND447_15535 PF04055 Radical SAM superfamily ND447_15535 PF06968 Biotin and Thiamin Synthesis associated domain ND447_15540 PF04998 RNA polymerase Rpb1, domain 5 ND447_15540 PF05000 RNA polymerase Rpb1, domain 4 ND447_15540 PF04983 RNA polymerase Rpb1, domain 3 ND447_15540 PF00623 RNA polymerase Rpb1, domain 2 ND447_15540 PF04997 RNA polymerase Rpb1, domain 1 ND447_15545 PF04565 RNA polymerase Rpb2, domain 3 ND447_15545 PF10385 RNA polymerase beta subunit external 1 domain ND447_15545 PF04560 RNA polymerase Rpb2, domain 7 ND447_15545 PF00562 RNA polymerase Rpb2, domain 6 ND447_15545 PF04563 RNA polymerase beta subunit ND447_15545 PF04561 RNA polymerase Rpb2, domain 2 ND447_15550 PF16320 Ribosomal protein L7/L12 dimerisation domain ND447_15550 PF00542 Ribosomal protein L7/L12 C-terminal domain ND447_15555 PF00466 Ribosomal protein L10 ND447_15560 PF00687 Ribosomal protein L1p/L10e family ND447_15565 PF00298 Ribosomal protein L11, RNA binding domain ND447_15565 PF03946 Ribosomal protein L11, N-terminal domain ND447_15570 PF02357 Transcription termination factor nusG ND447_15570 PF00467 KOW motif ND447_15575 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND447_15580 PF03144 Elongation factor Tu domain 2 ND447_15580 PF00009 Elongation factor Tu GTP binding domain ND447_15580 PF03143 Elongation factor Tu C-terminal domain ND447_15605 PF00485 Phosphoribulokinase / Uridine kinase family ND447_15610 PF03099 Biotin/lipoate A/B protein ligase family ND447_15610 PF08279 HTH domain ND447_15610 PF02237 Biotin protein ligase C terminal domain ND447_15615 PF01565 FAD binding domain ND447_15615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND447_15640 PF12724 Flavodoxin domain ND447_15645 PF02386 Cation transport protein ND447_15650 PF09186 Domain of unknown function (DUF1949) ND447_15650 PF01205 Uncharacterized protein family UPF0029 ND447_15655 PF00557 Metallopeptidase family M24 ND447_15660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND447_15660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND447_15660 PF00378 Enoyl-CoA hydratase/isomerase ND447_15665 PF02803 Thiolase, C-terminal domain ND447_15665 PF00108 Thiolase, N-terminal domain ND447_15670 PF00175 Oxidoreductase NAD-binding domain ND447_15670 PF00970 Oxidoreductase FAD-binding domain ND447_15675 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND447_15685 PF02357 Transcription termination factor nusG ND447_15690 PF00490 Delta-aminolevulinic acid dehydratase ND447_15695 PF01026 TatD related DNase ND447_15700 PF00902 Sec-independent protein translocase protein (TatC) ND447_15710 PF02416 mttA/Hcf106 family ND447_15715 PF03109 ABC1 family ND447_15720 PF02036 SCP-2 sterol transfer family ND447_15725 PF01209 ubiE/COQ5 methyltransferase family ND447_15730 PF02646 RmuC family ND447_15735 PF09335 SNARE associated Golgi protein ND447_15740 PF02554 Carbon starvation protein CstA ND447_15740 PF13722 5TM C-terminal transporter carbon starvation CstA ND447_15750 PF01048 Phosphorylase superfamily ND447_15755 PF01738 Dienelactone hydrolase family ND447_15760 PF08267 Cobalamin-independent synthase, N-terminal domain ND447_15760 PF01717 Cobalamin-independent synthase, Catalytic domain ND447_15765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_15765 PF03466 LysR substrate binding domain ND447_15770 PF00892 EamA-like transporter family ND447_15780 PF03009 Glycerophosphoryl diester phosphodiesterase family ND447_15785 PF17912 MalK OB fold domain ND447_15785 PF00005 ABC transporter ND447_15790 PF00528 Binding-protein-dependent transport system inner membrane component ND447_15795 PF00528 Binding-protein-dependent transport system inner membrane component ND447_15800 PF13416 Bacterial extracellular solute-binding protein ND447_15835 PF00005 ABC transporter ND447_15840 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND447_15840 PF00005 ABC transporter ND447_15845 PF02653 Branched-chain amino acid transport system / permease component ND447_15845 PF11862 Domain of unknown function (DUF3382) ND447_15850 PF02653 Branched-chain amino acid transport system / permease component ND447_15855 PF13458 Periplasmic binding protein ND447_15860 PF12568 Acetyltransferase (GNAT) domain, PanZ ND447_15865 PF02595 Glycerate kinase family ND447_15870 PF02447 GntP family permease ND447_15875 PF05651 Putative sugar diacid recognition ND447_15875 PF17853 GGDEF-like domain ND447_15875 PF13556 PucR C-terminal helix-turn-helix domain ND447_15880 PF04545 Sigma-70, region 4 ND447_15880 PF04542 Sigma-70 region 2 ND447_15880 PF00140 Sigma-70 factor, region 1.2 ND447_15885 PF02687 FtsX-like permease family ND447_15885 PF18075 FtsX extracellular domain ND447_15890 PF00005 ABC transporter ND447_15895 PF00448 SRP54-type protein, GTPase domain ND447_15895 PF02881 SRP54-type protein, helical bundle domain ND447_15895 PF00448 SRP54-type protein, GTPase domain ND447_15895 PF02881 SRP54-type protein, helical bundle domain ND447_15905 PF06611 Protein of unknown function (DUF1145) ND447_15920 PF07947 YhhN family ND447_15925 PF00403 Heavy-metal-associated domain ND447_15930 PF01206 Sulfurtransferase TusA ND447_15935 PF02592 Putative vitamin uptake transporter ND447_15940 PF08786 DcrB ND447_15945 PF13183 4Fe-4S dicluster domain ND447_15945 PF02754 Cysteine-rich domain ND447_15950 PF00890 FAD binding domain ND447_15955 PF04324 BFD-like [2Fe-2S] binding domain ND447_15955 PF01266 FAD dependent oxidoreductase ND447_15965 PF07690 Major Facilitator Superfamily ND447_15970 PF03009 Glycerophosphoryl diester phosphodiesterase family ND447_15980 PF12146 Serine aminopeptidase, S33 ND447_15985 PF01810 LysE type translocator ND447_15990 PF00271 Helicase conserved C-terminal domain ND447_15990 PF00570 HRDC domain ND447_15990 PF16124 RecQ zinc-binding ND447_15990 PF09382 RQC domain ND447_15990 PF00270 DEAD/DEAH box helicase ND447_15995 PF02253 Phospholipase A1 ND447_16000 PF03061 Thioesterase superfamily ND447_16005 PF00892 EamA-like transporter family ND447_16010 PF01544 CorA-like Mg2+ transporter protein ND447_16020 PF09370 Phosphoenolpyruvate hydrolase-like ND447_16035 PF13361 UvrD-like helicase C-terminal domain ND447_16035 PF00580 UvrD/REP helicase N-terminal domain ND447_16040 PF13419 Haloacid dehalogenase-like hydrolase ND447_16045 PF00589 Phage integrase family ND447_16045 PF02899 Phage integrase, N-terminal SAM-like domain ND447_16050 PF04340 Protein of unknown function, DUF484 ND447_16055 PF01678 Diaminopimelate epimerase ND447_16060 PF13627 Prokaryotic lipoprotein-attachment site ND447_16065 PF01491 Frataxin-like domain ND447_16070 PF12633 Adenylate cyclase NT domain ND447_16070 PF01295 Adenylate cyclase, class-I ND447_16075 PF03900 Porphobilinogen deaminase, C-terminal domain ND447_16075 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND447_16080 PF02602 Uroporphyrinogen-III synthase HemD ND447_16085 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND447_16090 PF07719 Tetratricopeptide repeat ND447_16090 PF07219 HemY protein N-terminus ND447_16120 PF00324 Amino acid permease ND447_16125 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND447_16130 PF06899 WzyE protein, O-antigen assembly polymerase ND447_16135 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND447_16140 PF01943 Polysaccharide biosynthesis protein ND447_16145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND447_16155 PF00483 Nucleotidyl transferase ND447_16160 PF16363 GDP-mannose 4,6 dehydratase ND447_16165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND447_16165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND447_16165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND447_16170 PF02350 UDP-N-acetylglucosamine 2-epimerase ND447_16175 PF02706 Chain length determinant protein ND447_16180 PF00953 Glycosyl transferase family 4 ND447_16185 PF07497 Rho termination factor, RNA-binding domain ND447_16185 PF07498 Rho termination factor, N-terminal domain ND447_16185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND447_16190 PF00085 Thioredoxin ND447_16195 PF00271 Helicase conserved C-terminal domain ND447_16195 PF00270 DEAD/DEAH box helicase ND447_16200 PF02541 Ppx/GppA phosphatase family ND447_16205 PF13361 UvrD-like helicase C-terminal domain ND447_16205 PF00580 UvrD/REP helicase N-terminal domain ND447_16215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND447_16215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND447_16220 PF03466 LysR substrate binding domain ND447_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_16225 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND447_16225 PF18416 N-acetylglucosamine binding protein domain 2 ND447_16230 PF00291 Pyridoxal-phosphate dependent enzyme ND447_16230 PF00585 C-terminal regulatory domain of Threonine dehydratase ND447_16235 PF00920 Dehydratase family ND447_16240 PF01063 Amino-transferase class IV ND447_16250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND447_16250 PF00205 Thiamine pyrophosphate enzyme, central domain ND447_16250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND447_16255 PF08046 IlvGEDA operon leader peptide ND447_16260 PF13335 Magnesium chelatase, subunit ChlI C-terminal ND447_16260 PF01078 Magnesium chelatase, subunit ChlI ND447_16265 PF04219 Protein of unknown function, DUF ND447_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_16270 PF03466 LysR substrate binding domain ND447_16320 PF01177 Asp/Glu/Hydantoin racemase ND447_16325 PF07715 TonB-dependent Receptor Plug Domain ND447_16325 PF00593 TonB dependent receptor ND447_16330 PF05958 tRNA (Uracil-5-)-methyltransferase ND447_16335 PF07226 Protein of unknown function (DUF1422) ND447_16340 PF00440 Bacterial regulatory proteins, tetR family ND447_16345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND447_16345 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_16350 PF03466 LysR substrate binding domain ND447_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_16355 PF08534 Redoxin ND447_16355 PF00462 Glutaredoxin ND447_16360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND447_16360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND447_16380 PF00529 HlyD membrane-fusion protein of T1SS ND447_16385 PF00664 ABC transporter transmembrane region ND447_16385 PF00005 ABC transporter ND447_16395 PF00593 TonB dependent receptor ND447_16395 PF07715 TonB-dependent Receptor Plug Domain ND447_16400 PF14698 Argininosuccinate lyase C-terminal ND447_16400 PF00206 Lyase ND447_16405 PF00764 Arginosuccinate synthase ND447_16410 PF00696 Amino acid kinase family ND447_16415 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND447_16415 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND447_16420 PF07687 Peptidase dimerisation domain ND447_16420 PF01546 Peptidase family M20/M25/M40 ND447_16425 PF00311 Phosphoenolpyruvate carboxylase ND447_16435 PF02219 Methylenetetrahydrofolate reductase ND447_16455 PF00742 Homoserine dehydrogenase ND447_16455 PF00696 Amino acid kinase family ND447_16455 PF03447 Homoserine dehydrogenase, NAD binding domain ND447_16460 PF01053 Cys/Met metabolism PLP-dependent enzyme ND447_16465 PF01340 Met Apo-repressor, MetJ ND447_16470 PF01197 Ribosomal protein L31 ND447_16475 PF00271 Helicase conserved C-terminal domain ND447_16475 PF00270 DEAD/DEAH box helicase ND447_16475 PF17764 3′ DNA-binding domain (3′BD) ND447_16475 PF18074 Primosomal protein N C-terminal domain ND447_16475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND447_16480 PF00356 Bacterial regulatory proteins, lacI family ND447_16485 PF05036 Sporulation related domain ND447_16490 PF00227 Proteasome subunit ND447_16495 PF10431 C-terminal, D2-small domain, of ClpB protein ND447_16495 PF07724 AAA domain (Cdc48 subfamily) ND447_16495 PF00004 ATPase family associated with various cellular activities (AAA) ND447_16500 PF01040 UbiA prenyltransferase family ND447_16505 PF03737 Aldolase/RraA ND447_16510 PF06005 Cell division protein ZapB ND447_16515 PF00230 Major intrinsic protein ND447_16520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND447_16520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND447_16525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND447_16530 PF07690 Major Facilitator Superfamily ND447_16535 PF00175 Oxidoreductase NAD-binding domain ND447_16535 PF00970 Oxidoreductase FAD-binding domain ND447_16540 PF05656 Protein of unknown function (DUF805) ND447_16545 PF07305 Protein of unknown function (DUF1454) ND447_16550 PF00121 Triosephosphate isomerase ND447_16560 PF00365 Phosphofructokinase ND447_16565 PF01545 Cation efflux family ND447_16565 PF16916 Dimerisation domain of Zinc Transporter ND447_16570 PF07813 LTXXQ motif family protein ND447_16575 PF00072 Response regulator receiver domain ND447_16575 PF00486 Transcriptional regulatory protein, C terminal ND447_16580 PF00672 HAMP domain ND447_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_16580 PF00512 His Kinase A (phospho-acceptor) domain ND447_16580 PF16527 Two-component sensor protein CpxA, periplasmic domain ND447_16585 PF00588 SpoU rRNA Methylase family ND447_16590 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_16590 PF06426 Serine acetyltransferase, N-terminal ND447_16595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND447_16595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND447_16600 PF02556 Preprotein translocase subunit SecB ND447_16605 PF00462 Glutaredoxin ND447_16610 PF00581 Rhodanese-like domain ND447_16615 PF01676 Metalloenzyme superfamily ND447_16615 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND447_16620 PF01551 Peptidase family M23 ND447_16625 PF04748 Divergent polysaccharide deacetylase ND447_16630 PF00107 Zinc-binding dehydrogenase ND447_16630 PF08240 Alcohol dehydrogenase GroES-like domain ND447_16635 PF00155 Aminotransferase class I and II ND447_16640 PF01370 NAD dependent epimerase/dehydratase family ND447_16645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND447_16650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND447_16655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND447_16660 PF00535 Glycosyl transferase family 2 ND447_16665 PF01467 Cytidylyltransferase-like ND447_16670 PF06827 Zinc finger found in FPG and IleRS ND447_16670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND447_16670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND447_16675 PF00471 Ribosomal protein L33 ND447_16680 PF00830 Ribosomal L28 family ND447_16685 PF04002 RadC-like JAB domain ND447_16690 PF04127 DNA / pantothenate metabolism flavoprotein ND447_16690 PF02441 Flavoprotein ND447_16695 PF00692 dUTPase ND447_16700 PF00440 Bacterial regulatory proteins, tetR family ND447_16705 PF00156 Phosphoribosyl transferase domain ND447_16710 PF03725 3' exoribonuclease family, domain 2 ND447_16710 PF01138 3' exoribonuclease family, domain 1 ND447_16715 PF08340 Domain of unknown function (DUF1732) ND447_16715 PF03755 YicC-like family, N-terminal region ND447_16725 PF03466 LysR substrate binding domain ND447_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND447_16730 PF13426 PAS domain ND447_16730 PF00990 Diguanylate cyclase, GGDEF domain ND447_16730 PF00563 EAL domain ND447_16735 PF00378 Enoyl-CoA hydratase/isomerase ND447_16740 PF01773 Na+ dependent nucleoside transporter N-terminus ND447_16740 PF07662 Na+ dependent nucleoside transporter C-terminus ND447_16740 PF07670 Nucleoside recognition ND447_16750 PF03458 UPF0126 domain ND447_16755 PF03120 NAD-dependent DNA ligase OB-fold domain ND447_16755 PF01653 NAD-dependent DNA ligase adenylation domain ND447_16760 PF00625 Guanylate kinase ND447_16765 PF01192 RNA polymerase Rpb6 ND447_16770 PF02824 TGS domain ND447_16770 PF04607 Region found in RelA / SpoT proteins ND447_16770 PF13291 ACT domain ND447_16775 PF00588 SpoU rRNA Methylase family ND447_16775 PF12105 SpoU, rRNA methylase, C-terminal ND447_16780 PF17191 RecG wedge domain ND447_16780 PF00270 DEAD/DEAH box helicase ND447_16780 PF00271 Helicase conserved C-terminal domain ND447_16785 PF03616 Sodium/glutamate symporter ND447_16790 PF00860 Permease family ND447_16795 PF05170 AsmA family ND447_16800 PF09500 Putative thioesterase (yiiD_Cterm) ND447_16800 PF00583 Acetyltransferase (GNAT) family ND447_16805 PF02580 D-Tyr-tRNA(Tyr) deacylase ND447_16810 PF03631 Virulence factor BrkB ND447_16815 PF13419 Haloacid dehalogenase-like hydrolase ND447_16820 PF00009 Elongation factor Tu GTP binding domain ND447_16820 PF00679 Elongation factor G C-terminus ND447_16820 PF03144 Elongation factor Tu domain 2 ND447_16825 PF03951 Glutamine synthetase, beta-Grasp domain ND447_16825 PF00120 Glutamine synthetase, catalytic domain ND447_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND447_16830 PF00989 PAS fold ND447_16830 PF00512 His Kinase A (phospho-acceptor) domain ND447_16835 PF02954 Bacterial regulatory protein, Fis family ND447_16835 PF00072 Response regulator receiver domain ND447_16835 PF00158 Sigma-54 interaction domain ND447_16840 PF06969 HemN C-terminal domain ND447_16840 PF04055 Radical SAM superfamily ND447_16845 PF04220 Der GTPase activator (YihI) ND447_16850 PF01926 50S ribosome-binding GTPase ND447_16855 PF01367 5'-3' exonuclease, C-terminal SAM fold ND447_16855 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND447_16855 PF00476 DNA polymerase family A ND447_16855 PF01612 3'-5' exonuclease ND447_16860 PF01323 DSBA-like thioredoxin domain ND447_16865 PF01636 Phosphotransferase enzyme family ND447_16870 PF06288 Protein of unknown function (DUF1040) ND447_16875 PF12804 MobA-like NTP transferase domain ND447_16880 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND447_16905 PF07729 FCD domain ND447_16905 PF00392 Bacterial regulatory proteins, gntR family ND447_16910 PF00356 Bacterial regulatory proteins, lacI family ND447_16915 PF00294 pfkB family carbohydrate kinase ND447_16920 PF13407 Periplasmic binding protein domain ND447_16925 PF02653 Branched-chain amino acid transport system / permease component ND447_16930 PF00005 ABC transporter ND447_16935 PF05025 RbsD / FucU transport protein family ND447_16940 PF02705 K+ potassium transporter ND447_16945 PF12592 Protein of unknown function (DUF3763) ND447_16945 PF17868 AAA lid domain ND447_16945 PF07728 AAA domain (dynein-related subfamily) ND447_16950 PF05762 VWA domain containing CoxE-like protein ND447_16960 PF03590 Aspartate-ammonia ligase ND447_16965 PF01037 Lrp/AsnC ligand binding domain ND447_16970 PF00258 Flavodoxin ND447_16975 PF13932 GidA associated domain ND447_16975 PF01134 Glucose inhibited division protein A ND447_16980 PF02527 rRNA small subunit methyltransferase G ND447_16985 PF03899 ATP synthase I chain ND447_16990 PF00119 ATP synthase A chain ND447_16995 PF00137 ATP synthase subunit C ND447_17000 PF00430 ATP synthase B/B' CF(0) ND447_17005 PF00213 ATP synthase delta (OSCP) subunit ND447_17010 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND447_17010 PF00306 ATP synthase alpha/beta chain, C terminal domain ND447_17010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND447_17015 PF00231 ATP synthase ND447_17020 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND447_17020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND447_17025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND447_17025 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND447_17030 PF12804 MobA-like NTP transferase domain ND447_17030 PF00132 Bacterial transferase hexapeptide (six repeats) ND447_17035 PF01380 SIS domain ND447_17040 PF12849 PBP superfamily domain ND447_17045 PF00528 Binding-protein-dependent transport system inner membrane component ND447_17050 PF00528 Binding-protein-dependent transport system inner membrane component ND447_17055 PF00005 ABC transporter ND447_17060 PF01895 PhoU domain ND447_17065 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND447_17070 PF00528 Binding-protein-dependent transport system inner membrane component ND447_17075 PF00528 Binding-protein-dependent transport system inner membrane component ND447_17080 PF00860 Permease family ND447_17085 PF02203 Tar ligand binding domain homologue ND447_17085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND447_17085 PF00672 HAMP domain ND447_17095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND447_17095 PF02753 Pili assembly chaperone PapD, C-terminal domain ND447_17100 PF00577 Outer membrane usher protein ND447_17100 PF13953 PapC C-terminal domain ND447_17100 PF13954 PapC N-terminal domain ND447_17110 PF01926 50S ribosome-binding GTPase ND447_17110 PF12631 MnmE helical domain ND447_17110 PF10396 GTP-binding protein TrmE N-terminus ND447_17115 PF02096 60Kd inner membrane protein ND447_17115 PF14849 YidC periplasmic domain ND447_17120 PF01809 Putative membrane protein insertion efficiency factor ND447_17125 PF00825 Ribonuclease P ND447_17130 PF00468 Ribosomal protein L34 ND447_17145 PF02796 Helix-turn-helix domain of resolvase ND447_17145 PF00239 Resolvase, N terminal domain ND447_17155 PF13614 AAA domain ND447_17160 PF06406 StbA protein ND447_17225 PF01381 Helix-turn-helix ND447_17245 PF03432 Relaxase/Mobilisation nuclease domain ND447_17245 PF18821 Large polyvalent protein-associated domain 7 ND447_17350 PF08401 Domain of unknown function (DUF1738) ND447_17350 PF18818 Metallopeptidase superfamily domain ND447_17350 PF13362 Toprim domain ND447_17360 PF00437 Type II/IV secretion system protein ND447_17375 PF04917 Bacterial shufflon protein, N-terminal constant region ND447_17385 PF01464 Transglycosylase SLT domain ND447_17400 PF00437 Type II/IV secretion system protein ND447_17485 PF02796 Helix-turn-helix domain of resolvase ND447_17485 PF00239 Resolvase, N terminal domain ND447_17505 PF00465 Iron-containing alcohol dehydrogenase ND447_17510 PF02583 Metal-sensitive transcriptional repressor ND447_17515 PF00107 Zinc-binding dehydrogenase ND447_17515 PF08240 Alcohol dehydrogenase GroES-like domain ND447_17525 PF00756 Putative esterase ND447_17540 PF13610 DDE domain ND447_17545 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ND447_17550 PF02796 Helix-turn-helix domain of resolvase ND447_17550 PF00239 Resolvase, N terminal domain ND447_17555 PF13610 DDE domain ND447_17590 PF00437 Type II/IV secretion system protein ND447_17615 PF04917 Bacterial shufflon protein, N-terminal constant region ND447_17630 PF00437 Type II/IV secretion system protein ND447_17730 PF13091 PLD-like domain ND447_17740 PF03432 Relaxase/Mobilisation nuclease domain ND447_17740 PF18821 Large polyvalent protein-associated domain 7 ND447_17760 PF06067 Domain of unknown function (DUF932) ND447_17790 PF06952 PsiA protein ND447_17800 PF02195 ParB-like nuclease domain ND447_17830 PF06924 Protein of unknown function (DUF1281) ND447_17850 PF06406 StbA protein ND447_17860 PF01381 Helix-turn-helix ND447_17865 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ND447_17875 PF00717 Peptidase S24-like ND447_17880 PF13438 Domain of unknown function (DUF4113) ND447_17880 PF00817 impB/mucB/samB family ND447_17880 PF11798 IMS family HHH motif ND447_17880 PF11799 impB/mucB/samB family C-terminal domain ND447_17915 PF00239 Resolvase, N terminal domain ND447_17915 PF02796 Helix-turn-helix domain of resolvase