locus-tag class description ND437_00005 PF00308 Bacterial dnaA protein ND437_00005 PF08299 Bacterial dnaA protein helix-turn-helix ND437_00005 PF11638 DnaA N-terminal domain ND437_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ND437_00010 PF02767 DNA polymerase III beta subunit, central domain ND437_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ND437_00015 PF02463 RecF/RecN/SMC N terminal domain ND437_00020 PF01751 Toprim domain ND437_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ND437_00020 PF00204 DNA gyrase B ND437_00020 PF18053 DNA gyrase B subunit insert domain ND437_00030 PF12566 Protein of unknown function (DUF3748) ND437_00030 PF07676 WD40-like Beta Propeller Repeat ND437_00035 PF07119 Protein of unknown function (DUF1375) ND437_00040 PF00011 Hsp20/alpha crystallin family ND437_00045 PF00011 Hsp20/alpha crystallin family ND437_00050 PF02080 TrkA-C domain ND437_00050 PF06826 Predicted Permease Membrane Region ND437_00055 PF00155 Aminotransferase class I and II ND437_00060 PF13488 Glycine zipper ND437_00060 PF00691 OmpA family ND437_00080 PF03352 Methyladenine glycosylase ND437_00090 PF02091 Glycyl-tRNA synthetase alpha subunit ND437_00095 PF05746 DALR anticodon binding domain ND437_00095 PF02092 Glycyl-tRNA synthetase beta subunit ND437_00100 PF11254 Protein of unknown function (DUF3053) ND437_00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND437_00130 PF02378 Phosphotransferase system, EIIC ND437_00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND437_00135 PF01232 Mannitol dehydrogenase Rossmann domain ND437_00135 PF08125 Mannitol dehydrogenase C-terminal domain ND437_00140 PF05068 Mannitol repressor ND437_00145 PF10928 Protein of unknown function (DUF2810) ND437_00150 PF03473 MOSC domain ND437_00150 PF03475 3-alpha domain ND437_00155 PF00672 HAMP domain ND437_00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_00155 PF02203 Tar ligand binding domain homologue ND437_00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND437_00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND437_00165 PF02634 FdhD/NarQ family ND437_00175 PF13247 4Fe-4S dicluster domain ND437_00175 PF09163 Formate dehydrogenase N, transmembrane ND437_00180 PF01292 Prokaryotic cytochrome b561 ND437_00185 PF04216 Protein involved in formate dehydrogenase formation ND437_00190 PF03841 L-seryl-tRNA selenium transferase ND437_00190 PF12390 Selenocysteine synthase N terminal ND437_00195 PF09107 Elongation factor SelB, winged helix ND437_00195 PF09106 Elongation factor SelB, winged helix ND437_00195 PF00009 Elongation factor Tu GTP binding domain ND437_00195 PF03144 Elongation factor Tu domain 2 ND437_00200 PF01427 D-ala-D-ala dipeptidase ND437_00205 PF07690 Major Facilitator Superfamily ND437_00210 PF01757 Acyltransferase family ND437_00245 PF17391 Urocanase N-terminal domain ND437_00245 PF17392 Urocanase C-terminal domain ND437_00245 PF01175 Urocanase Rossmann-like domain ND437_00250 PF00221 Aromatic amino acid lyase ND437_00255 PF00324 Amino acid permease ND437_00265 PF12146 Serine aminopeptidase, S33 ND437_00270 PF08019 Phosphoethanolamine transferase EptA/EptB ND437_00270 PF00884 Sulfatase ND437_00275 PF00072 Response regulator receiver domain ND437_00275 PF00196 Bacterial regulatory proteins, luxR family ND437_00280 PF05231 MASE1 ND437_00280 PF07730 Histidine kinase ND437_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_00285 PF07690 Major Facilitator Superfamily ND437_00295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_00300 PF00528 Binding-protein-dependent transport system inner membrane component ND437_00305 PF00528 Binding-protein-dependent transport system inner membrane component ND437_00305 PF12911 N-terminal TM domain of oligopeptide transport permease C ND437_00310 PF00005 ABC transporter ND437_00310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_00315 PF00005 ABC transporter ND437_00315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_00320 PF11658 Cellulose biosynthesis protein BcsG ND437_00325 PF11120 Cellulose biosynthesis protein BcsF ND437_00330 PF10995 Cellulose biosynthesis GIL ND437_00340 PF06564 Cellulose biosynthesis protein BcsQ ND437_00345 PF03552 Cellulose synthase ND437_00345 PF00535 Glycosyl transferase family 2 ND437_00345 PF07238 PilZ domain ND437_00350 PF03170 Bacterial cellulose synthase subunit ND437_00355 PF01270 Glycosyl hydrolases family 8 ND437_00360 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND437_00365 PF17154 Gammaproteobacterial periplasmic sensor domain ND437_00365 PF00990 Diguanylate cyclase, GGDEF domain ND437_00365 PF00672 HAMP domain ND437_00365 PF00563 EAL domain ND437_00370 PF00375 Sodium:dicarboxylate symporter family ND437_00375 PF05193 Peptidase M16 inactive domain ND437_00375 PF00675 Insulinase (Peptidase family M16) ND437_00380 PF00294 pfkB family carbohydrate kinase ND437_00385 PF01361 Tautomerase enzyme ND437_00390 PF00563 EAL domain ND437_00395 PF02611 CDP-diacylglycerol pyrophosphatase ND437_00400 PF03631 Virulence factor BrkB ND437_00405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_00405 PF03466 LysR substrate binding domain ND437_00410 PF00375 Sodium:dicarboxylate symporter family ND437_00415 PF01053 Cys/Met metabolism PLP-dependent enzyme ND437_00435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_00435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND437_00440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND437_00445 PF01432 Peptidase family M3 ND437_00450 PF04445 Putative SAM-dependent methyltransferase ND437_00455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND437_00455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND437_00460 PF00582 Universal stress protein family ND437_00465 PF10625 Universal stress protein B (UspB) ND437_00470 PF01384 Phosphate transporter family ND437_00480 PF01810 LysE type translocator ND437_00485 PF00583 Acetyltransferase (GNAT) family ND437_00490 PF17954 Quercetinase C-terminal cupin domain ND437_00490 PF02678 Pirin ND437_00495 PF00356 Bacterial regulatory proteins, lacI family ND437_00495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND437_00500 PF02447 GntP family permease ND437_00505 PF01202 Shikimate kinase ND437_00510 PF01914 MarC family integral membrane protein ND437_00515 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND437_00515 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND437_00520 PF07694 5TMR of 5TMR-LYT ND437_00520 PF06580 Histidine kinase ND437_00525 PF00128 Alpha amylase, catalytic domain ND437_00525 PF02806 Alpha amylase, C-terminal all-beta domain ND437_00525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND437_00530 PF00128 Alpha amylase, catalytic domain ND437_00530 PF18390 Glycogen debranching enzyme C-terminal domain ND437_00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND437_00535 PF00483 Nucleotidyl transferase ND437_00540 PF08323 Starch synthase catalytic domain ND437_00540 PF00534 Glycosyl transferases group 1 ND437_00545 PF00343 Carbohydrate phosphorylase ND437_00550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND437_00550 PF01266 FAD dependent oxidoreductase ND437_00560 PF00239 Resolvase, N terminal domain ND437_00560 PF02796 Helix-turn-helix domain of resolvase ND437_00585 PF08220 DeoR-like helix-turn-helix domain ND437_00585 PF00455 DeoR C terminal sensor domain ND437_00590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND437_00590 PF01694 Rhomboid family ND437_00595 PF00581 Rhodanese-like domain ND437_00600 PF17874 MalT-like TPR region ND437_00600 PF00196 Bacterial regulatory proteins, luxR family ND437_00605 PF00343 Carbohydrate phosphorylase ND437_00610 PF02446 4-alpha-glucanotransferase ND437_00615 PF01106 NifU-like domain ND437_00615 PF01521 Iron-sulphur cluster biosynthesis ND437_00620 PF00156 Phosphoribosyl transferase domain ND437_00625 PF00561 alpha/beta hydrolase fold ND437_00635 PF09012 FeoC like transcriptional regulator ND437_00640 PF02421 Ferrous iron transport protein B ND437_00640 PF17910 FeoB cytosolic helical domain ND437_00640 PF07670 Nucleoside recognition ND437_00640 PF07664 Ferrous iron transport protein B C terminus ND437_00645 PF04023 FeoA domain ND437_00650 PF09371 Tex-like protein N-terminal domain ND437_00650 PF00575 S1 RNA binding domain ND437_00650 PF17674 HHH domain ND437_00650 PF16921 Tex protein YqgF-like domain ND437_00675 PF03449 Transcription elongation factor, N-terminal ND437_00675 PF01272 Transcription elongation factor, GreA/GreB, C-term ND437_00680 PF00072 Response regulator receiver domain ND437_00680 PF00486 Transcriptional regulatory protein, C terminal ND437_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_00685 PF00512 His Kinase A (phospho-acceptor) domain ND437_00685 PF00672 HAMP domain ND437_00690 PF01293 Phosphoenolpyruvate carboxykinase ND437_00695 PF01430 Hsp33 protein ND437_00700 PF01479 S4 domain ND437_00705 PF13419 Haloacid dehalogenase-like hydrolase ND437_00710 PF07095 Intracellular growth attenuator protein IgaA ND437_00715 PF00293 NUDIX domain ND437_00720 PF17092 Penicillin-binding protein OB-like domain ND437_00720 PF00905 Penicillin binding protein transpeptidase domain ND437_00720 PF00912 Transglycosylase ND437_00745 PF00263 Bacterial type II and III secretion system protein ND437_00745 PF03958 Bacterial type II/III secretion system short domain ND437_00750 PF01202 Shikimate kinase ND437_00755 PF01761 3-dehydroquinate synthase ND437_00760 PF05036 Sporulation related domain ND437_00765 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND437_00770 PF00834 Ribulose-phosphate 3 epimerase family ND437_00775 PF13419 Haloacid dehalogenase-like hydrolase ND437_00780 PF00579 tRNA synthetases class I (W and Y) ND437_00785 PF10414 Sirohaem synthase dimerisation region ND437_00785 PF14824 Sirohaem biosynthesis protein central ND437_00785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND437_00790 PF01226 Formate/nitrite transporter ND437_00795 PF13806 Rieske-like [2Fe-2S] domain ND437_00800 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND437_00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_00800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND437_00800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND437_00800 PF04324 BFD-like [2Fe-2S] binding domain ND437_00805 PF07969 Amidohydrolase family ND437_00810 PF07690 Major Facilitator Superfamily ND437_00825 PF00356 Bacterial regulatory proteins, lacI family ND437_00830 PF02056 Family 4 glycosyl hydrolase ND437_00830 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND437_00835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND437_00840 PF00117 Glutamine amidotransferase class-I ND437_00845 PF00202 Aminotransferase class-III ND437_00850 PF12805 FUSC-like inner membrane protein yccS ND437_00855 PF13545 Crp-like helix-turn-helix domain ND437_00855 PF00027 Cyclic nucleotide-binding domain ND437_00860 PF02566 OsmC-like protein ND437_00880 PF00156 Phosphoribosyl transferase domain ND437_00885 PF00291 Pyridoxal-phosphate dependent enzyme ND437_00890 PF00485 Phosphoribulokinase / Uridine kinase family ND437_00895 PF06794 Uncharacterised protein family (UPF0270) ND437_00900 PF00561 alpha/beta hydrolase fold ND437_00905 PF01810 LysE type translocator ND437_00910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND437_00915 PF00535 Glycosyl transferase family 2 ND437_00920 PF00005 ABC transporter ND437_00920 PF12848 ABC transporter ND437_00925 PF02525 Flavodoxin-like fold ND437_00930 PF02254 TrkA-N domain ND437_00930 PF00999 Sodium/hydrogen exchanger family ND437_00935 PF09526 Probable metal-binding protein (DUF2387) ND437_00940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND437_00945 PF04102 SlyX ND437_00950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND437_00950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND437_00955 PF13309 HTH domain ND437_00955 PF08348 YheO-like PAS domain ND437_00960 PF02635 DsrE/DsrF-like family ND437_00965 PF02635 DsrE/DsrF-like family ND437_00970 PF04077 DsrH like protein ND437_00975 PF00164 Ribosomal protein S12/S23 ND437_00980 PF00177 Ribosomal protein S7p/S5e ND437_00985 PF00679 Elongation factor G C-terminus ND437_00985 PF03764 Elongation factor G, domain IV ND437_00985 PF00009 Elongation factor Tu GTP binding domain ND437_00985 PF03144 Elongation factor Tu domain 2 ND437_00985 PF14492 Elongation Factor G, domain II ND437_00990 PF03143 Elongation factor Tu C-terminal domain ND437_00990 PF03144 Elongation factor Tu domain 2 ND437_00990 PF00009 Elongation factor Tu GTP binding domain ND437_00995 PF04324 BFD-like [2Fe-2S] binding domain ND437_01000 PF00210 Ferritin-like domain ND437_01005 PF00338 Ribosomal protein S10p/S20e ND437_01010 PF00297 Ribosomal protein L3 ND437_01015 PF00573 Ribosomal protein L4/L1 family ND437_01020 PF00276 Ribosomal protein L23 ND437_01025 PF03947 Ribosomal Proteins L2, C-terminal domain ND437_01025 PF00181 Ribosomal Proteins L2, RNA binding domain ND437_01030 PF00203 Ribosomal protein S19 ND437_01035 PF00237 Ribosomal protein L22p/L17e ND437_01040 PF00189 Ribosomal protein S3, C-terminal domain ND437_01040 PF07650 KH domain ND437_01045 PF00252 Ribosomal protein L16p/L10e ND437_01050 PF00831 Ribosomal L29 protein ND437_01055 PF00366 Ribosomal protein S17 ND437_01060 PF00238 Ribosomal protein L14p/L23e ND437_01065 PF00467 KOW motif ND437_01065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND437_01070 PF00281 Ribosomal protein L5 ND437_01070 PF00673 ribosomal L5P family C-terminus ND437_01075 PF00253 Ribosomal protein S14p/S29e ND437_01080 PF00410 Ribosomal protein S8 ND437_01085 PF00347 Ribosomal protein L6 ND437_01090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND437_01095 PF03719 Ribosomal protein S5, C-terminal domain ND437_01095 PF00333 Ribosomal protein S5, N-terminal domain ND437_01100 PF00327 Ribosomal protein L30p/L7e ND437_01105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND437_01110 PF00344 SecY translocase ND437_01115 PF00444 Ribosomal protein L36 ND437_01120 PF00416 Ribosomal protein S13/S18 ND437_01125 PF00411 Ribosomal protein S11 ND437_01130 PF01479 S4 domain ND437_01130 PF00163 Ribosomal protein S4/S9 N-terminal domain ND437_01135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND437_01135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND437_01135 PF01000 RNA polymerase Rpb3/RpoA insert domain ND437_01140 PF01196 Ribosomal protein L17 ND437_01145 PF13411 MerR HTH family regulatory protein ND437_01150 PF03889 Alternative ribosome-rescue factor A ND437_01155 PF01741 Large-conductance mechanosensitive channel, MscL ND437_01160 PF02080 TrkA-C domain ND437_01160 PF02254 TrkA-N domain ND437_01165 PF01189 16S rRNA methyltransferase RsmB/F ND437_01165 PF01029 NusB family ND437_01170 PF02911 Formyl transferase, C-terminal domain ND437_01170 PF00551 Formyl transferase ND437_01175 PF01327 Polypeptide deformylase ND437_01180 PF02481 DNA recombination-mediator protein A ND437_01180 PF17782 DprA winged helix domain ND437_01185 PF04361 Protein of unknown function (DUF494) ND437_01190 PF01396 Topoisomerase DNA binding C4 zinc finger ND437_01195 PF01300 Telomere recombination ND437_01200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND437_01200 PF01488 Shikimate / quinate 5-dehydrogenase ND437_01200 PF08501 Shikimate dehydrogenase substrate binding domain ND437_01205 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_01245 PF04204 Homoserine O-succinyltransferase ND437_01250 PF01274 Malate synthase ND437_01255 PF00463 Isocitrate lyase family ND437_01260 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND437_01265 PF01614 Bacterial transcriptional regulator ND437_01265 PF09339 IclR helix-turn-helix domain ND437_01270 PF02574 Homocysteine S-methyltransferase ND437_01270 PF00809 Pterin binding enzyme ND437_01270 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND437_01270 PF02607 B12 binding domain ND437_01270 PF02310 B12 binding domain ND437_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_01285 PF03466 LysR substrate binding domain ND437_01365 PF17758 Proteasomal ATPase OB N-terminal domain ND437_01365 PF16450 Proteasomal ATPase OB C-terminal domain ND437_01365 PF00004 ATPase family associated with various cellular activities (AAA) ND437_01375 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ND437_01380 PF05860 haemagglutination activity domain ND437_01380 PF13332 Hemagglutinin repeat ND437_01385 PF08479 POTRA domain, ShlB-type ND437_01385 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND437_01385 PF17287 POTRA domain ND437_01390 PF00696 Amino acid kinase family ND437_01390 PF01842 ACT domain ND437_01395 PF00342 Phosphoglucose isomerase ND437_01400 PF06146 Phosphate-starvation-inducible E ND437_01405 PF00528 Binding-protein-dependent transport system inner membrane component ND437_01410 PF00528 Binding-protein-dependent transport system inner membrane component ND437_01410 PF14785 Maltose transport system permease protein MalF P2 domain ND437_01415 PF01547 Bacterial extracellular solute-binding protein ND437_01425 PF17912 MalK OB fold domain ND437_01425 PF00005 ABC transporter ND437_01430 PF02264 LamB porin ND437_01435 PF07148 Maltose operon periplasmic protein precursor (MalM) ND437_01440 PF04345 Chorismate lyase ND437_01445 PF01040 UbiA prenyltransferase family ND437_01450 PF01553 Acyltransferase ND437_01455 PF01219 Prokaryotic diacylglycerol kinase ND437_01460 PF00717 Peptidase S24-like ND437_01460 PF01726 LexA DNA binding domain ND437_01465 PF01475 Ferric uptake regulator family ND437_01470 PF01207 Dihydrouridine synthase (Dus) ND437_01475 PF09583 Phage shock protein G (Phageshock_PspG) ND437_01480 PF00107 Zinc-binding dehydrogenase ND437_01480 PF08240 Alcohol dehydrogenase GroES-like domain ND437_01485 PF00772 DnaB-like helicase N terminal domain ND437_01485 PF03796 DnaB-like helicase C terminal domain ND437_01490 PF00842 Alanine racemase, C-terminal domain ND437_01490 PF01168 Alanine racemase, N-terminal domain ND437_01495 PF00155 Aminotransferase class I and II ND437_01500 PF04237 YjbR ND437_01505 PF00005 ABC transporter ND437_01505 PF17755 UvrA DNA-binding domain ND437_01505 PF17760 UvrA interaction domain ND437_01510 PF00436 Single-strand binding protein family ND437_01520 PF00860 Permease family ND437_01525 PF00999 Sodium/hydrogen exchanger family ND437_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_01530 PF03466 LysR substrate binding domain ND437_01535 PF03788 LrgA family ND437_01540 PF04172 LrgB-like family ND437_01545 PF00484 Carbonic anhydrase ND437_01550 PF03279 Bacterial lipid A biosynthesis acyltransferase ND437_01560 PF02954 Bacterial regulatory protein, Fis family ND437_01565 PF01207 Dihydrouridine synthase (Dus) ND437_01575 PF00474 Sodium:solute symporter family ND437_01580 PF06196 Protein of unknown function (DUF997) ND437_01585 PF02785 Biotin carboxylase C-terminal domain ND437_01585 PF00289 Biotin carboxylase, N-terminal domain ND437_01585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND437_01590 PF00364 Biotin-requiring enzyme ND437_01595 PF01220 Dehydroquinase class II ND437_01600 PF01794 Ferric reductase like transmembrane component ND437_01605 PF00174 Oxidoreductase molybdopterin binding domain ND437_01610 PF00107 Zinc-binding dehydrogenase ND437_01610 PF08240 Alcohol dehydrogenase GroES-like domain ND437_01615 PF17157 Gammaproteobacterial periplasmic sensor domain ND437_01615 PF00990 Diguanylate cyclase, GGDEF domain ND437_01615 PF00563 EAL domain ND437_01625 PF04085 rod shape-determining protein MreC ND437_01630 PF04093 rod shape-determining protein MreD ND437_01635 PF02545 Maf-like protein ND437_01640 PF10150 Ribonuclease E/G family ND437_01640 PF00575 S1 RNA binding domain ND437_01645 PF13116 Protein of unknown function ND437_01645 PF13502 AsmA-like C-terminal region ND437_01650 PF00795 Carbon-nitrogen hydrolase ND437_01655 PF01523 Putative modulator of DNA gyrase ND437_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_01660 PF03466 LysR substrate binding domain ND437_01665 PF07869 Protein of unknown function (DUF1656) ND437_01670 PF13533 Biotin-lipoyl like ND437_01675 PF04632 Fusaric acid resistance protein family ND437_01680 PF00171 Aldehyde dehydrogenase family ND437_01685 PF00545 ribonuclease ND437_01690 PF01337 Barstar (barnase inhibitor) ND437_01695 PF04751 Protein of unknown function (DUF615) ND437_01700 PF01523 Putative modulator of DNA gyrase ND437_01705 PF07361 Cytochrome b562 ND437_01710 PF14760 Rnk N-terminus ND437_01710 PF01272 Transcription elongation factor, GreA/GreB, C-term ND437_01720 PF00690 Cation transporter/ATPase, N-terminus ND437_01720 PF00689 Cation transporting ATPase, C-terminus ND437_01725 PF00356 Bacterial regulatory proteins, lacI family ND437_01730 PF02378 Phosphotransferase system, EIIC ND437_01730 PF00367 phosphotransferase system, EIIB ND437_01735 PF11941 Domain of unknown function (DUF3459) ND437_01735 PF00128 Alpha amylase, catalytic domain ND437_01740 PF01042 Endoribonuclease L-PSP ND437_01745 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND437_01745 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND437_01750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND437_01750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND437_01755 PF00381 PTS HPr component phosphorylation site ND437_01760 PF03668 P-loop ATPase protein family ND437_01765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND437_01770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND437_01775 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND437_01775 PF04963 Sigma-54 factor, core binding domain ND437_01775 PF04552 Sigma-54, DNA binding domain ND437_01780 PF00005 ABC transporter ND437_01780 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND437_01785 PF03968 OstA-like protein ND437_01790 PF06835 Lipopolysaccharide-assembly, LptC-related ND437_01800 PF01380 SIS domain ND437_01800 PF00571 CBS domain ND437_01805 PF01699 Sodium/calcium exchanger protein ND437_01810 PF00005 ABC transporter ND437_01815 PF02405 Permease MlaE ND437_01820 PF02470 MlaD protein ND437_01825 PF05494 MlaC protein ND437_01830 PF13466 STAS domain ND437_01835 PF01722 BolA-like protein ND437_01840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND437_01845 PF13180 PDZ domain ND437_01850 PF13180 PDZ domain ND437_01850 PF00595 PDZ domain ND437_01855 PF06295 Protein of unknown function (DUF1043) ND437_01860 PF03969 AFG1-like ATPase ND437_01865 PF00572 Ribosomal protein L13 ND437_01870 PF00380 Ribosomal protein S9/S16 ND437_01875 PF00043 Glutathione S-transferase, C-terminal domain ND437_01875 PF02798 Glutathione S-transferase, N-terminal domain ND437_01880 PF04386 Stringent starvation protein B ND437_01890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND437_01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_01895 PF00310 Glutamine amidotransferases class-II ND437_01895 PF04898 Glutamate synthase central domain ND437_01895 PF01645 Conserved region in glutamate synthase ND437_01895 PF01493 GXGXG motif ND437_01900 PF16199 Radical_SAM C-terminal domain ND437_01900 PF04055 Radical SAM superfamily ND437_01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_01910 PF00512 His Kinase A (phospho-acceptor) domain ND437_01910 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND437_01910 PF01627 Hpt domain ND437_01910 PF00989 PAS fold ND437_01910 PF00072 Response regulator receiver domain ND437_01920 PF00912 Transglycosylase ND437_01925 PF04972 BON domain ND437_01930 PF13580 SIS domain ND437_01935 PF02021 Uncharacterised protein family UPF0102 ND437_01940 PF04348 LppC putative lipoprotein ND437_01945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND437_01960 PF02678 Pirin ND437_01960 PF17954 Quercetinase C-terminal cupin domain ND437_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_01965 PF03466 LysR substrate binding domain ND437_01970 PF07681 DoxX ND437_01975 PF13997 YqjK-like protein ND437_01980 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND437_01985 PF05957 Bacterial protein of unknown function (DUF883) ND437_01995 PF13721 SecD export protein N-terminal TM region ND437_02000 PF09335 SNARE associated Golgi protein ND437_02010 PF07729 FCD domain ND437_02010 PF00392 Bacterial regulatory proteins, gntR family ND437_02015 PF07690 Major Facilitator Superfamily ND437_02020 PF02614 Glucuronate isomerase ND437_02025 PF01232 Mannitol dehydrogenase Rossmann domain ND437_02025 PF08125 Mannitol dehydrogenase C-terminal domain ND437_02030 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND437_02030 PF08666 SAF domain ND437_02035 PF10688 Bacterial inner membrane protein ND437_02040 PF00375 Sodium:dicarboxylate symporter family ND437_02045 PF03741 Integral membrane protein TerC family ND437_02050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND437_02055 PF01863 Protein of unknown function DUF45 ND437_02065 PF05175 Methyltransferase small domain ND437_02070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND437_02070 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_02075 PF08479 POTRA domain, ShlB-type ND437_02075 PF17287 POTRA domain ND437_02075 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND437_02080 PF13018 Extended Signal Peptide of Type V secretion system ND437_02080 PF05860 haemagglutination activity domain ND437_02080 PF04829 Pre-toxin domain with VENN motif ND437_02080 PF13332 Hemagglutinin repeat ND437_02095 PF13332 Hemagglutinin repeat ND437_02095 PF04829 Pre-toxin domain with VENN motif ND437_02100 PF07262 CDI immunity protein ND437_02130 PF00106 short chain dehydrogenase ND437_02155 PF04546 Sigma-70, non-essential region ND437_02155 PF03979 Sigma-70 factor, region 1.1 ND437_02155 PF04542 Sigma-70 region 2 ND437_02155 PF04539 Sigma-70 region 3 ND437_02155 PF04545 Sigma-70, region 4 ND437_02155 PF00140 Sigma-70 factor, region 1.2 ND437_02160 PF10410 DnaB-helicase binding domain of primase ND437_02160 PF08278 DNA primase DnaG DnaB-binding ND437_02160 PF08275 DNA primase catalytic core, N-terminal domain ND437_02160 PF01807 CHC2 zinc finger ND437_02165 PF01165 Ribosomal protein S21 ND437_02170 PF00814 Glycoprotease family ND437_02175 PF02660 Glycerol-3-phosphate acyltransferase ND437_02180 PF02152 Dihydroneopterin aldolase ND437_02185 PF02673 Bacitracin resistance protein BacA ND437_02190 PF12627 Probable RNA and SrmB- binding site of polymerase A ND437_02190 PF01743 Poly A polymerase head domain ND437_02190 PF01966 HD domain ND437_02195 PF08239 Bacterial SH3 domain ND437_02200 PF01928 CYTH domain ND437_02205 PF08335 GlnD PII-uridylyltransferase ND437_02205 PF03710 Glutamate-ammonia ligase adenylyltransferase ND437_02210 PF01467 Cytidylyltransferase-like ND437_02210 PF00294 pfkB family carbohydrate kinase ND437_02215 PF04380 Membrane fusogenic activity ND437_02220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND437_02225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND437_02230 PF03738 Glutathionylspermidine synthase preATP-grasp ND437_02235 PF06693 Protein of unknown function (DUF1190) ND437_02240 PF02321 Outer membrane efflux protein ND437_02245 PF00293 NUDIX domain ND437_02250 PF06853 Protein of unknown function (DUF1249) ND437_02255 PF00149 Calcineurin-like phosphoesterase ND437_02260 PF05728 Uncharacterised protein family (UPF0227) ND437_02265 PF01751 Toprim domain ND437_02265 PF00204 DNA gyrase B ND437_02265 PF00986 DNA gyrase B subunit, carboxyl terminus ND437_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_02270 PF03466 LysR substrate binding domain ND437_02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_02275 PF02525 Flavodoxin-like fold ND437_02280 PF03989 DNA gyrase C-terminal domain, beta-propeller ND437_02280 PF00521 DNA gyrase/topoisomerase IV, subunit A ND437_02285 PF01553 Acyltransferase ND437_02290 PF07732 Multicopper oxidase ND437_02290 PF07731 Multicopper oxidase ND437_02295 PF11842 Domain of unknown function (DUF3362) ND437_02295 PF04055 Radical SAM superfamily ND437_02295 PF08497 Radical SAM N-terminal ND437_02300 PF00248 Aldo/keto reductase family ND437_02305 PF00465 Iron-containing alcohol dehydrogenase ND437_02310 PF06719 AraC-type transcriptional regulator N-terminus ND437_02310 PF12833 Helix-turn-helix domain ND437_02315 PF09335 SNARE associated Golgi protein ND437_02320 PF01053 Cys/Met metabolism PLP-dependent enzyme ND437_02325 PF01618 MotA/TolQ/ExbB proton channel family ND437_02330 PF02472 Biopolymer transport protein ExbD/TolR ND437_02365 PF00437 Type II/IV secretion system protein ND437_02380 PF04972 BON domain ND437_02380 PF00263 Bacterial type II and III secretion system protein ND437_02380 PF13629 Pilus formation protein N terminal region ND437_02405 PF08501 Shikimate dehydrogenase substrate binding domain ND437_02410 PF00593 TonB dependent receptor ND437_02410 PF07715 TonB-dependent Receptor Plug Domain ND437_02415 PF00756 Putative esterase ND437_02415 PF11806 Domain of unknown function (DUF3327) ND437_02420 PF03621 MbtH-like protein ND437_02425 PF00501 AMP-binding enzyme ND437_02425 PF00550 Phosphopantetheine attachment site ND437_02425 PF00668 Condensation domain ND437_02425 PF13193 AMP-binding enzyme C-terminal domain ND437_02425 PF00975 Thioesterase domain ND437_02435 PF00005 ABC transporter ND437_02440 PF01032 FecCD transport family ND437_02445 PF01032 FecCD transport family ND437_02450 PF05977 Transmembrane secretion effector ND437_02455 PF01497 Periplasmic binding protein ND437_02460 PF00425 chorismate binding enzyme ND437_02465 PF00501 AMP-binding enzyme ND437_02465 PF13193 AMP-binding enzyme C-terminal domain ND437_02470 PF00550 Phosphopantetheine attachment site ND437_02470 PF00857 Isochorismatase family ND437_02480 PF00668 Condensation domain ND437_02480 PF00501 AMP-binding enzyme ND437_02480 PF00550 Phosphopantetheine attachment site ND437_02480 PF00975 Thioesterase domain ND437_02480 PF13193 AMP-binding enzyme C-terminal domain ND437_02485 PF00291 Pyridoxal-phosphate dependent enzyme ND437_02490 PF01490 Transmembrane amino acid transporter protein ND437_02495 PF00871 Acetokinase family ND437_02500 PF01228 Glycine radical ND437_02500 PF02901 Pyruvate formate lyase-like ND437_02505 PF00294 pfkB family carbohydrate kinase ND437_02510 PF00571 CBS domain ND437_02510 PF01380 SIS domain ND437_02515 PF00455 DeoR C terminal sensor domain ND437_02515 PF08220 DeoR-like helix-turn-helix domain ND437_02520 PF06923 Glucitol operon activator protein (GutM) ND437_02525 PF00106 short chain dehydrogenase ND437_02530 PF03829 PTS system glucitol/sorbitol-specific IIA component ND437_02535 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ND437_02535 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ND437_02540 PF03608 PTS system enzyme II sorbitol-specific factor ND437_02550 PF16456 YmgD protein ND437_02560 PF01464 Transglycosylase SLT domain ND437_02560 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND437_02565 PF04362 Bacterial Fe(2+) trafficking ND437_02570 PF14815 NUDIX domain ND437_02570 PF10576 Iron-sulfur binding domain of endonuclease III ND437_02570 PF00633 Helix-hairpin-helix motif ND437_02570 PF00730 HhH-GPD superfamily base excision DNA repair protein ND437_02575 PF02390 Putative methyltransferase ND437_02580 PF04320 Protein with unknown function (DUF469) ND437_02585 PF04960 Glutaminase ND437_02590 PF11101 Protein of unknown function (DUF2884) ND437_02595 PF06969 HemN C-terminal domain ND437_02595 PF04055 Radical SAM superfamily ND437_02600 PF01725 Ham1 family ND437_02605 PF02594 Uncharacterised ACR, YggU family COG1872 ND437_02610 PF02325 YGGT family ND437_02615 PF03807 NADP oxidoreductase coenzyme F420-dependent ND437_02615 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND437_02620 PF01168 Alanine racemase, N-terminal domain ND437_02625 PF00437 Type II/IV secretion system protein ND437_02630 PF04371 Porphyromonas-type peptidyl-arginine deiminase ND437_02635 PF00795 Carbon-nitrogen hydrolase ND437_02640 PF03652 Holliday junction resolvase ND437_02645 PF02622 Uncharacterized ACR, COG1678 ND437_02650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND437_02650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND437_02655 PF04452 RNA methyltransferase ND437_02660 PF04231 Endonuclease I ND437_02665 PF17283 SprT-like zinc ribbon domain ND437_02665 PF10263 SprT-like family ND437_02675 PF04143 Sulphur transport ND437_02685 PF02772 S-adenosylmethionine synthetase, central domain ND437_02685 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND437_02685 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND437_02690 PF17810 Arginine decarboxylase helical bundle domain ND437_02690 PF17944 Arginine decarboxylase C-terminal helical extension ND437_02690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND437_02700 PF02779 Transketolase, pyrimidine binding domain ND437_02700 PF02780 Transketolase, C-terminal domain ND437_02700 PF00456 Transketolase, thiamine diphosphate binding domain ND437_02705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND437_02705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND437_02710 PF00162 Phosphoglycerate kinase ND437_02715 PF01116 Fructose-bisphosphate aldolase class-II ND437_02720 PF05552 Conserved TM helix ND437_02720 PF00924 Mechanosensitive ion channel ND437_02725 PF01810 LysE type translocator ND437_02730 PF04402 Protein of unknown function (DUF541) ND437_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_02735 PF03466 LysR substrate binding domain ND437_02740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND437_02745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND437_02745 PF01842 ACT domain ND437_02745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND437_02750 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND437_02760 PF05164 Cell division protein ZapA ND437_02765 PF03695 Uncharacterised protein family (UPF0149) ND437_02770 PF00557 Metallopeptidase family M24 ND437_02770 PF05195 Aminopeptidase P, N-terminal domain ND437_02775 PF01494 FAD binding domain ND437_02780 PF01494 FAD binding domain ND437_02785 PF01571 Aminomethyltransferase folate-binding domain ND437_02785 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND437_02790 PF01597 Glycine cleavage H-protein ND437_02795 PF02347 Glycine cleavage system P-protein ND437_02805 PF03006 Haemolysin-III related ND437_02810 PF01571 Aminomethyltransferase folate-binding domain ND437_02815 PF03937 Flavinator of succinate dehydrogenase ND437_02820 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND437_02825 PF00258 Flavodoxin ND437_02830 PF02899 Phage integrase, N-terminal SAM-like domain ND437_02830 PF00589 Phage integrase family ND437_02835 PF10411 Disulfide bond isomerase protein N-terminus ND437_02835 PF13098 Thioredoxin-like domain ND437_02840 PF01368 DHH family ND437_02840 PF02272 DHHA1 domain ND437_02840 PF17768 RecJ OB domain ND437_02850 PF00152 tRNA synthetases class II (D, K and N) ND437_02850 PF01336 OB-fold nucleic acid binding domain ND437_02860 PF02405 Permease MlaE ND437_02865 PF00005 ABC transporter ND437_02890 PF03958 Bacterial type II/III secretion system short domain ND437_02890 PF00263 Bacterial type II and III secretion system protein ND437_02895 PF00437 Type II/IV secretion system protein ND437_02900 PF00482 Type II secretion system (T2SS), protein F ND437_02905 PF08334 Type II secretion system (T2SS), protein G ND437_02905 PF07963 Prokaryotic N-terminal methylation motif ND437_02915 PF02501 Type II secretion system (T2SS), protein I ND437_02915 PF07963 Prokaryotic N-terminal methylation motif ND437_02920 PF11612 Type II secretion system (T2SS), protein J ND437_02920 PF07963 Prokaryotic N-terminal methylation motif ND437_02965 PF03466 LysR substrate binding domain ND437_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_02970 PF03466 LysR substrate binding domain ND437_02975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND437_02975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND437_02980 PF00356 Bacterial regulatory proteins, lacI family ND437_02985 PF13193 AMP-binding enzyme C-terminal domain ND437_02985 PF00501 AMP-binding enzyme ND437_02985 PF01553 Acyltransferase ND437_02990 PF07690 Major Facilitator Superfamily ND437_02995 PF00248 Aldo/keto reductase family ND437_03000 PF03741 Integral membrane protein TerC family ND437_03005 PF02976 DNA mismatch repair enzyme MutH ND437_03010 PF00293 NUDIX domain ND437_03015 PF01590 GAF domain ND437_03015 PF05524 PEP-utilising enzyme, N-terminal ND437_03015 PF00391 PEP-utilising enzyme, mobile domain ND437_03015 PF02896 PEP-utilising enzyme, TIM barrel domain ND437_03020 PF01790 Prolipoprotein diacylglyceryl transferase ND437_03025 PF00303 Thymidylate synthase ND437_03045 PF07963 Prokaryotic N-terminal methylation motif ND437_03045 PF12528 Type II secretion prepilin peptidase dependent protein C ND437_03050 PF17946 RecC C-terminal domain ND437_03055 PF00675 Insulinase (Peptidase family M16) ND437_03055 PF05193 Peptidase M16 inactive domain ND437_03055 PF16187 Middle or third domain of peptidase_M16 ND437_03060 PF13361 UvrD-like helicase C-terminal domain ND437_03060 PF12705 PD-(D/E)XK nuclease superfamily ND437_03060 PF00580 UvrD/REP helicase N-terminal domain ND437_03065 PF13538 UvrD-like helicase C-terminal domain ND437_03070 PF00583 Acetyltransferase (GNAT) family ND437_03070 PF00696 Amino acid kinase family ND437_03075 PF01520 N-acetylmuramoyl-L-alanine amidase ND437_03075 PF11741 AMIN domain ND437_03095 PF06725 3D domain ND437_03095 PF03562 MltA specific insert domain ND437_03100 PF00899 ThiF family ND437_03105 PF02657 Fe-S metabolism associated domain ND437_03110 PF00266 Aminotransferase class-V ND437_03115 PF06004 Bacterial protein of unknown function (DUF903) ND437_03120 PF03466 LysR substrate binding domain ND437_03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_03125 PF04241 Protein of unknown function (DUF423) ND437_03130 PF18125 RlmM ferredoxin-like domain ND437_03130 PF01728 FtsJ-like methyltransferase ND437_03135 PF01367 5'-3' exonuclease, C-terminal SAM fold ND437_03135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND437_03140 PF11892 Domain of unknown function (DUF3412) ND437_03140 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND437_03140 PF03641 Possible lysine decarboxylase ND437_03145 PF14489 QueF-like protein ND437_03145 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND437_03150 PF07348 Syd protein (SUKH-2) ND437_03155 PF04287 tRNA pseudouridine synthase C ND437_03160 PF00849 RNA pseudouridylate synthase ND437_03165 PF00258 Flavodoxin ND437_03170 PF11944 Protein of unknown function (DUF3461) ND437_03175 PF14602 Hexapeptide repeat of succinyl-transferase ND437_03175 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_03175 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND437_03180 PF01842 ACT domain ND437_03180 PF08335 GlnD PII-uridylyltransferase ND437_03180 PF01966 HD domain ND437_03180 PF01909 Nucleotidyltransferase domain ND437_03185 PF00557 Metallopeptidase family M24 ND437_03195 PF00318 Ribosomal protein S2 ND437_03200 PF00889 Elongation factor TS ND437_03205 PF00696 Amino acid kinase family ND437_03210 PF01765 Ribosome recycling factor ND437_03215 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND437_03215 PF13288 DXP reductoisomerase C-terminal domain ND437_03215 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND437_03220 PF01255 Putative undecaprenyl diphosphate synthase ND437_03230 PF17820 PDZ domain ND437_03230 PF02163 Peptidase family M50 ND437_03235 PF01103 Surface antigen ND437_03235 PF07244 Surface antigen variable number repeat ND437_03240 PF03938 Outer membrane protein (OmpH-like) ND437_03245 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_03245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND437_03250 PF07977 FabA-like domain ND437_03255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND437_03255 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_03260 PF02684 Lipid-A-disaccharide synthetase ND437_03265 PF01351 Ribonuclease HII ND437_03270 PF02811 PHP domain ND437_03270 PF14579 Helix-hairpin-helix motif ND437_03270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND437_03270 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND437_03270 PF01336 OB-fold nucleic acid binding domain ND437_03275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND437_03290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND437_03295 PF01171 PP-loop family ND437_03295 PF09179 TilS substrate binding domain ND437_03295 PF11734 TilS substrate C-terminal domain ND437_03300 PF00034 Cytochrome c ND437_03305 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND437_03310 PF06786 Uncharacterised protein family (UPF0253) ND437_03315 PF07152 YaeQ protein ND437_03320 PF00472 RF-1 domain ND437_03325 PF04170 NlpE N-terminal domain ND437_03325 PF17185 NlpE C-terminal OB domain ND437_03330 PF03129 Anticodon binding domain ND437_03330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND437_03330 PF04073 Aminoacyl-tRNA editing domain ND437_03335 PF01980 tRNA-methyltransferase O ND437_03335 PF18389 TrmO C-terminal domain ND437_03340 PF16358 RcsF lipoprotein ND437_03345 PF03180 NLPA lipoprotein ND437_03350 PF00528 Binding-protein-dependent transport system inner membrane component ND437_03355 PF00005 ABC transporter ND437_03355 PF09383 NIL domain ND437_03390 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND437_03395 PF13091 PLD-like domain ND437_03400 PF00583 Acetyltransferase (GNAT) family ND437_03400 PF13380 CoA binding domain ND437_03400 PF13607 Succinyl-CoA ligase like flavodoxin domain ND437_03405 PF03942 DTW domain ND437_03410 PF00085 Thioredoxin ND437_03415 PF00588 SpoU rRNA Methylase family ND437_03415 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND437_03420 PF07690 Major Facilitator Superfamily ND437_03425 PF00529 HlyD membrane-fusion protein of T1SS ND437_03425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND437_03435 PF01047 MarR family ND437_03440 PF07690 Major Facilitator Superfamily ND437_03445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND437_03450 PF00528 Binding-protein-dependent transport system inner membrane component ND437_03455 PF00005 ABC transporter ND437_03455 PF00571 CBS domain ND437_03460 PF00268 Ribonucleotide reductase, small chain ND437_03465 PF02867 Ribonucleotide reductase, barrel domain ND437_03465 PF00317 Ribonucleotide reductase, all-alpha domain ND437_03465 PF08343 Ribonucleotide reductase N-terminal ND437_03470 PF07972 NrdI Flavodoxin like ND437_03485 PF09400 Protein of unknown function (DUF2002) ND437_03490 PF06711 Protein of unknown function (DUF1198) ND437_03500 PF00313 'Cold-shock' DNA-binding domain ND437_03505 PF06039 Malate:quinone oxidoreductase (Mqo) ND437_03510 PF01070 FMN-dependent dehydrogenase ND437_03515 PF02652 L-lactate permease ND437_03520 PF03466 LysR substrate binding domain ND437_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_03525 PF00561 alpha/beta hydrolase fold ND437_03535 PF00005 ABC transporter ND437_03540 PF02653 Branched-chain amino acid transport system / permease component ND437_03550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND437_03550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND437_03555 PF01380 SIS domain ND437_03555 PF00571 CBS domain ND437_03625 PF01668 SmpB protein ND437_03630 PF03364 Polyketide cyclase / dehydrase and lipid transport ND437_03635 PF03658 RnfH family Ubiquitin ND437_03640 PF04355 SmpA / OmlA family ND437_03645 PF02463 RecF/RecN/SMC N terminal domain ND437_03650 PF01513 ATP-NAD kinase ND437_03655 PF01025 GrpE ND437_03660 PF03167 Uracil DNA glycosylase superfamily ND437_03665 PF01228 Glycine radical ND437_03675 PF12796 Ankyrin repeats (3 copies) ND437_03680 PF00271 Helicase conserved C-terminal domain ND437_03680 PF00270 DEAD/DEAH box helicase ND437_03685 PF05175 Methyltransferase small domain ND437_03690 PF02910 Fumarate reductase flavoprotein C-term ND437_03690 PF00890 FAD binding domain ND437_03695 PF04542 Sigma-70 region 2 ND437_03695 PF08281 Sigma-70, region 4 ND437_03700 PF03873 Anti sigma-E protein RseA, C-terminal domain ND437_03700 PF03872 Anti sigma-E protein RseA, N-terminal domain ND437_03705 PF03888 MucB/RseB N-terminal domain ND437_03705 PF17188 MucB/RseB C-terminal domain ND437_03715 PF03144 Elongation factor Tu domain 2 ND437_03715 PF06421 GTP-binding protein LepA C-terminus ND437_03715 PF00009 Elongation factor Tu GTP binding domain ND437_03715 PF00679 Elongation factor G C-terminus ND437_03720 PF10502 Signal peptidase, peptidase S26 ND437_03725 PF00035 Double-stranded RNA binding motif ND437_03725 PF14622 Ribonuclease-III-like ND437_03730 PF01926 50S ribosome-binding GTPase ND437_03730 PF07650 KH domain ND437_03735 PF11967 Recombination protein O N terminal ND437_03735 PF02565 Recombination protein O C terminal ND437_03740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND437_03745 PF01648 4'-phosphopantetheinyl transferase superfamily ND437_03750 PF12838 4Fe-4S dicluster domain ND437_03755 PF01418 Helix-turn-helix domain, rpiR family ND437_03755 PF01380 SIS domain ND437_03760 PF01380 SIS domain ND437_03765 PF02378 Phosphotransferase system, EIIC ND437_03765 PF00367 phosphotransferase system, EIIB ND437_03775 PF14437 MafB19-like deaminase ND437_03780 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_03780 PF01464 Transglycosylase SLT domain ND437_03785 PF02769 AIR synthase related protein, C-terminal domain ND437_03785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND437_03785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND437_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_03795 PF00512 His Kinase A (phospho-acceptor) domain ND437_03800 PF13942 YfhG lipoprotein ND437_03805 PF00072 Response regulator receiver domain ND437_03805 PF00158 Sigma-54 interaction domain ND437_03810 PF02540 NAD synthase ND437_03810 PF00795 Carbon-nitrogen hydrolase ND437_03815 PF00543 Nitrogen regulatory protein P-II ND437_03820 PF10797 Protein of unknown function ND437_03825 PF10941 Protein of unknown function DUF2620 ND437_03830 PF02126 Phosphotriesterase family ND437_03835 PF01168 Alanine racemase, N-terminal domain ND437_03845 PF14502 Helix-turn-helix domain ND437_03845 PF14503 YhfZ C-terminal domain ND437_03850 PF00175 Oxidoreductase NAD-binding domain ND437_03850 PF00042 Globin ND437_03850 PF00970 Oxidoreductase FAD-binding domain ND437_03855 PF00464 Serine hydroxymethyltransferase ND437_03860 PF12832 MFS_1 like family ND437_03865 PF00874 PRD domain ND437_03870 PF06226 Protein of unknown function (DUF1007) ND437_03875 PF03824 High-affinity nickel-transport protein ND437_03880 PF00459 Inositol monophosphatase family ND437_03885 PF00588 SpoU rRNA Methylase family ND437_03890 PF02082 Transcriptional regulator ND437_03895 PF00266 Aminotransferase class-V ND437_03900 PF01592 NifU-like N terminal domain ND437_03905 PF01521 Iron-sulphur cluster biosynthesis ND437_03910 PF07743 HSCB C-terminal oligomerisation domain ND437_03910 PF00226 DnaJ domain ND437_03915 PF00012 Hsp70 protein ND437_03920 PF00111 2Fe-2S iron-sulfur cluster binding domain ND437_03925 PF04384 Iron-sulphur cluster assembly ND437_03930 PF12404 Peptidase ND437_03930 PF00883 Cytosol aminopeptidase family, catalytic domain ND437_03935 PF07179 SseB protein N-terminal domain ND437_03935 PF14581 SseB protein C-terminal domain ND437_03940 PF07703 Alpha-2-macroglobulin bait region domain ND437_03940 PF00207 Alpha-2-macroglobulin family ND437_03940 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND437_03940 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND437_03940 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND437_03940 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND437_03940 PF17962 Bacterial macroglobulin domain 6 ND437_03940 PF01835 MG2 domain ND437_03940 PF07678 A-macroglobulin TED domain ND437_03945 PF06832 Penicillin-Binding Protein C-terminus Family ND437_03945 PF00912 Transglycosylase ND437_03945 PF00905 Penicillin binding protein transpeptidase domain ND437_03955 PF00334 Nucleoside diphosphate kinase ND437_03960 PF04055 Radical SAM superfamily ND437_03970 PF13464 Domain of unknown function (DUF4115) ND437_03975 PF04551 GcpE protein ND437_03980 PF03129 Anticodon binding domain ND437_03980 PF13393 Histidyl-tRNA synthetase ND437_03985 PF09976 Tetratricopeptide repeat-like domain ND437_03990 PF13360 PQQ-like domain ND437_03995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND437_03995 PF01926 50S ribosome-binding GTPase ND437_04000 PF07191 zinc-ribbons ND437_04005 PF02601 Exonuclease VII, large subunit ND437_04005 PF13742 OB-fold nucleic acid binding domain ND437_04010 PF00571 CBS domain ND437_04010 PF00478 IMP dehydrogenase / GMP reductase domain ND437_04015 PF00117 Glutamine amidotransferase class-I ND437_04015 PF00958 GMP synthase C terminal domain ND437_04015 PF02540 NAD synthase ND437_04025 PF08543 Phosphomethylpyrimidine kinase ND437_04040 PF00781 Diacylglycerol kinase catalytic domain ND437_04045 PF01136 Peptidase family U32 ND437_04045 PF16325 Peptidase family U32 C-terminal domain ND437_04050 PF07411 Domain of unknown function (DUF1508) ND437_04055 PF00072 Response regulator receiver domain ND437_04055 PF00486 Transcriptional regulatory protein, C terminal ND437_04060 PF00672 HAMP domain ND437_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_04060 PF00512 His Kinase A (phospho-acceptor) domain ND437_04065 PF07690 Major Facilitator Superfamily ND437_04070 PF00873 AcrB/AcrD/AcrF family ND437_04075 PF00873 AcrB/AcrD/AcrF family ND437_04080 PF13533 Biotin-lipoyl like ND437_04090 PF13953 PapC C-terminal domain ND437_04090 PF13954 PapC N-terminal domain ND437_04090 PF00577 Outer membrane usher protein ND437_04095 PF02753 Pili assembly chaperone PapD, C-terminal domain ND437_04095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_04105 PF00012 Hsp70 protein ND437_04110 PF03448 MgtE intracellular N domain ND437_04110 PF01769 Divalent cation transporter ND437_04110 PF00571 CBS domain ND437_04120 PF02541 Ppx/GppA phosphatase family ND437_04125 PF13089 Polyphosphate kinase N-terminal domain ND437_04125 PF17941 Polyphosphate kinase C-terminal domain 1 ND437_04125 PF13090 Polyphosphate kinase C-terminal domain 2 ND437_04125 PF02503 Polyphosphate kinase middle domain ND437_04130 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04135 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04140 PF00005 ABC transporter ND437_04145 PF13302 Acetyltransferase (GNAT) domain ND437_04150 PF00551 Formyl transferase ND437_04155 PF00586 AIR synthase related protein, N-terminal domain ND437_04155 PF02769 AIR synthase related protein, C-terminal domain ND437_04165 PF00860 Permease family ND437_04170 PF00308 Bacterial dnaA protein ND437_04175 PF03960 ArsC family ND437_04180 PF01435 Peptidase family M48 ND437_04180 PF07720 Tetratricopeptide repeat ND437_04185 PF01594 AI-2E family transporter ND437_04190 PF00578 AhpC/TSA family ND437_04195 PF01842 ACT domain ND437_04200 PF00701 Dihydrodipicolinate synthetase family ND437_04205 PF06804 NlpB/DapX lipoprotein ND437_04210 PF01259 SAICAR synthetase ND437_04215 PF04284 Protein of unknown function (DUF441) ND437_04220 PF05127 Helicase ND437_04220 PF17176 tRNA-binding domain ND437_04220 PF13718 GNAT acetyltransferase 2 ND437_04220 PF08351 Domain of unknown function (DUF1726) ND437_04225 PF02230 Phospholipase/Carboxylesterase ND437_04230 PF13980 Uncharacterised protein family (UPF0370) ND437_04235 PF02557 D-alanyl-D-alanine carboxypeptidase ND437_04240 PF01546 Peptidase family M20/M25/M40 ND437_04240 PF07687 Peptidase dimerisation domain ND437_04245 PF03960 ArsC family ND437_04250 PF01817 Chorismate mutase type II ND437_04260 PF00873 AcrB/AcrD/AcrF family ND437_04270 PF00072 Response regulator receiver domain ND437_04270 PF00196 Bacterial regulatory proteins, luxR family ND437_04275 PF00037 4Fe-4S binding domain ND437_04275 PF12800 4Fe-4S binding domain ND437_04275 PF13187 4Fe-4S dicluster domain ND437_04280 PF03927 NapD protein ND437_04285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND437_04285 PF00384 Molybdopterin oxidoreductase ND437_04285 PF01568 Molydopterin dinucleotide binding domain ND437_04285 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND437_04290 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND437_04295 PF03264 NapC/NirT cytochrome c family, N-terminal region ND437_04300 PF00293 NUDIX domain ND437_04305 PF03949 Malic enzyme, NAD binding domain ND437_04305 PF01515 Phosphate acetyl/butaryl transferase ND437_04305 PF00390 Malic enzyme, N-terminal domain ND437_04310 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND437_04315 PF01218 Coproporphyrinogen III oxidase ND437_04320 PF00583 Acetyltransferase (GNAT) family ND437_04330 PF00589 Phage integrase family ND437_04395 PF04076 Bacterial OB fold (BOF) protein ND437_04400 PF06572 Protein of unknown function (DUF1131) ND437_04405 PF04261 Dyp-type peroxidase family ND437_04410 PF00701 Dihydrodipicolinate synthetase family ND437_04415 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND437_04420 PF00480 ROK family ND437_04425 PF04074 YhcH/YjgK/YiaL ND437_04430 PF01418 Helix-turn-helix domain, rpiR family ND437_04430 PF01380 SIS domain ND437_04435 PF07690 Major Facilitator Superfamily ND437_04445 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04450 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04455 PF00005 ABC transporter ND437_04460 PF00291 Pyridoxal-phosphate dependent enzyme ND437_04465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND437_04470 PF02896 PEP-utilising enzyme, TIM barrel domain ND437_04470 PF05524 PEP-utilising enzyme, N-terminal ND437_04470 PF00391 PEP-utilising enzyme, mobile domain ND437_04475 PF00381 PTS HPr component phosphorylation site ND437_04480 PF00291 Pyridoxal-phosphate dependent enzyme ND437_04490 PF04354 ZipA, C-terminal FtsZ-binding domain ND437_04495 PF00533 BRCA1 C Terminus (BRCT) domain ND437_04495 PF01653 NAD-dependent DNA ligase adenylation domain ND437_04495 PF03120 NAD-dependent DNA ligase OB-fold domain ND437_04495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND437_04495 PF12826 Helix-hairpin-helix motif ND437_04500 PF12843 Putative quorum-sensing-regulated virulence factor ND437_04530 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND437_04575 PF07670 Nucleoside recognition ND437_04575 PF01773 Na+ dependent nucleoside transporter N-terminus ND437_04575 PF07662 Na+ dependent nucleoside transporter C-terminus ND437_04580 PF01566 Natural resistance-associated macrophage protein ND437_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_04590 PF03466 LysR substrate binding domain ND437_04600 PF02685 Glucokinase ND437_04605 PF07690 Major Facilitator Superfamily ND437_04610 PF04397 LytTr DNA-binding domain ND437_04610 PF00072 Response regulator receiver domain ND437_04615 PF07694 5TMR of 5TMR-LYT ND437_04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_04615 PF06580 Histidine kinase ND437_04620 PF07350 Protein of unknown function (DUF1479) ND437_04625 PF00155 Aminotransferase class I and II ND437_04630 PF01292 Prokaryotic cytochrome b561 ND437_04645 PF13406 Transglycosylase SLT domain ND437_04650 PF03831 PhnA domain ND437_04650 PF08274 PhnA Zinc-Ribbon ND437_04665 PF00005 ABC transporter ND437_04670 PF03379 CcmB protein ND437_04675 PF01578 Cytochrome C assembly protein ND437_04680 PF04995 Heme exporter protein D (CcmD) ND437_04685 PF03100 CcmE ND437_04690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND437_04690 PF01578 Cytochrome C assembly protein ND437_04695 PF08534 Redoxin ND437_04700 PF03918 Cytochrome C biogenesis protein ND437_04705 PF03918 Cytochrome C biogenesis protein ND437_04710 PF04333 MlaA lipoprotein ND437_04715 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND437_04720 PF04175 Protein of unknown function (DUF406) ND437_04725 PF02803 Thiolase, C-terminal domain ND437_04725 PF00108 Thiolase, N-terminal domain ND437_04730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND437_04730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND437_04730 PF00378 Enoyl-CoA hydratase/isomerase ND437_04735 PF00300 Histidine phosphatase superfamily (branch 1) ND437_04740 PF01713 Smr domain ND437_04745 PF05175 Methyltransferase small domain ND437_04750 PF01264 Chorismate synthase ND437_04755 PF03411 Penicillin-insensitive murein endopeptidase ND437_04760 PF01925 Sulfite exporter TauE/SafE ND437_04765 PF04315 Elongation factor P hydroxylase ND437_04770 PF08891 YfcL protein ND437_04775 PF01266 FAD dependent oxidoreductase ND437_04775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND437_04780 PF00109 Beta-ketoacyl synthase, N-terminal domain ND437_04780 PF02801 Beta-ketoacyl synthase, C-terminal domain ND437_04810 PF00578 AhpC/TSA family ND437_04815 PF00155 Aminotransferase class I and II ND437_04835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND437_04835 PF11890 Domain of unknown function (DUF3410) ND437_04835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND437_04840 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND437_04840 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND437_04845 PF01416 tRNA pseudouridine synthase ND437_04850 PF09335 SNARE associated Golgi protein ND437_04855 PF01039 Carboxyl transferase domain ND437_04855 PF17848 Acetyl-coA carboxylase zinc finger domain ND437_04860 PF02875 Mur ligase family, glutamate ligase domain ND437_04860 PF08245 Mur ligase middle domain ND437_04865 PF05036 Sporulation related domain ND437_04870 PF02674 Colicin V production protein ND437_04875 PF00156 Phosphoribosyl transferase domain ND437_04880 PF02441 Flavoprotein ND437_04890 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_04895 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04900 PF00528 Binding-protein-dependent transport system inner membrane component ND437_04905 PF00005 ABC transporter ND437_04910 PF01370 NAD dependent epimerase/dehydratase family ND437_04910 PF08338 Domain of unknown function (DUF1731) ND437_04915 PF00043 Glutathione S-transferase, C-terminal domain ND437_04915 PF02798 Glutathione S-transferase, N-terminal domain ND437_04925 PF12850 Calcineurin-like phosphoesterase superfamily domain ND437_04930 PF00293 NUDIX domain ND437_04935 PF03611 PTS system sugar-specific permease component ND437_04945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND437_04950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND437_04950 PF00356 Bacterial regulatory proteins, lacI family ND437_04955 PF07085 DRTGG domain ND437_04955 PF01515 Phosphate acetyl/butaryl transferase ND437_04960 PF00871 Acetokinase family ND437_04965 PF04217 Protein of unknown function, DUF412 ND437_04970 PF03887 YfbU domain ND437_04980 PF03600 Citrate transporter ND437_04980 PF02080 TrkA-C domain ND437_04990 PF00155 Aminotransferase class I and II ND437_04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_04995 PF03466 LysR substrate binding domain ND437_05000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND437_05005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND437_05010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND437_05010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND437_05020 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND437_05020 PF10531 SLBB domain ND437_05020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND437_05025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND437_05025 PF00384 Molybdopterin oxidoreductase ND437_05025 PF01568 Molydopterin dinucleotide binding domain ND437_05025 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND437_05030 PF00146 NADH dehydrogenase ND437_05035 PF12838 4Fe-4S dicluster domain ND437_05040 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND437_05045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND437_05050 PF00361 Proton-conducting membrane transporter ND437_05050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND437_05055 PF00361 Proton-conducting membrane transporter ND437_05060 PF00361 Proton-conducting membrane transporter ND437_05065 PF06496 Protein of unknown function (DUF1097) ND437_05070 PF05957 Bacterial protein of unknown function (DUF883) ND437_05075 PF00425 chorismate binding enzyme ND437_05080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND437_05080 PF16582 Middle domain of thiamine pyrophosphate ND437_05080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND437_05085 PF12697 Alpha/beta hydrolase family ND437_05090 PF00378 Enoyl-CoA hydratase/isomerase ND437_05095 PF13378 Enolase C-terminal domain-like ND437_05100 PF13193 AMP-binding enzyme C-terminal domain ND437_05100 PF00501 AMP-binding enzyme ND437_05105 PF00199 Catalase ND437_05105 PF06628 Catalase-related immune-responsive ND437_05110 PF07437 YfaZ precursor ND437_05115 PF03222 Tryptophan/tyrosine permease family ND437_05125 PF00535 Glycosyl transferase family 2 ND437_05130 PF04138 GtrA-like protein ND437_05135 PF00994 Probable molybdopterin binding domain ND437_05140 PF03974 Ecotin ND437_05150 PF00111 2Fe-2S iron-sulfur cluster binding domain ND437_05155 PF00268 Ribonucleotide reductase, small chain ND437_05160 PF03477 ATP cone domain ND437_05160 PF02867 Ribonucleotide reductase, barrel domain ND437_05160 PF00317 Ribonucleotide reductase, all-alpha domain ND437_05170 PF03989 DNA gyrase C-terminal domain, beta-propeller ND437_05170 PF00521 DNA gyrase/topoisomerase IV, subunit A ND437_05175 PF00072 Response regulator receiver domain ND437_05175 PF09456 RcsC Alpha-Beta-Loop (ABL) ND437_05175 PF00512 His Kinase A (phospho-acceptor) domain ND437_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_05180 PF00072 Response regulator receiver domain ND437_05180 PF00196 Bacterial regulatory proteins, luxR family ND437_05185 PF16359 RcsD-ABL domain ND437_05185 PF01627 Hpt domain ND437_05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_05190 PF07690 Major Facilitator Superfamily ND437_05195 PF00267 Gram-negative porin ND437_05210 PF13302 Acetyltransferase (GNAT) domain ND437_05215 PF00144 Beta-lactamase ND437_05220 PF12706 Beta-lactamase superfamily domain ND437_05225 PF06183 DinI-like family ND437_05270 PF10065 Uncharacterized conserved protein (DUF2303) ND437_05305 PF03354 Phage Terminase ND437_05310 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND437_05325 PF06147 Protein of unknown function (DUF968) ND437_05350 PF00182 Chitinase class I ND437_05400 PF01343 Peptidase family S49 ND437_05440 PF17482 Phage tail sheath C-terminal domain ND437_05440 PF04984 Phage tail sheath protein subtilisin-like domain ND437_05485 PF04865 Baseplate J-like protein ND437_05500 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND437_05515 PF00239 Resolvase, N terminal domain ND437_05515 PF02796 Helix-turn-helix domain of resolvase ND437_05530 PF11893 Domain of unknown function (DUF3413) ND437_05530 PF00884 Sulfatase ND437_05535 PF07208 Protein of unknown function (DUF1414) ND437_05540 PF04245 37-kD nucleoid-associated bacterial protein ND437_05545 PF01386 Ribosomal L25p family ND437_05550 PF00271 Helicase conserved C-terminal domain ND437_05550 PF04851 Type III restriction enzyme, res subunit ND437_05555 PF01479 S4 domain ND437_05555 PF00849 RNA pseudouridylate synthase ND437_05560 PF07690 Major Facilitator Superfamily ND437_05565 PF13989 YejG-like protein ND437_05570 PF00005 ABC transporter ND437_05570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_05575 PF00528 Binding-protein-dependent transport system inner membrane component ND437_05575 PF12911 N-terminal TM domain of oligopeptide transport permease C ND437_05580 PF00528 Binding-protein-dependent transport system inner membrane component ND437_05585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_05590 PF12792 CSS motif domain associated with EAL ND437_05590 PF00563 EAL domain ND437_05595 PF00877 NlpC/P60 family ND437_05600 PF01569 PAP2 superfamily ND437_05605 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND437_05605 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND437_05615 PF01232 Mannitol dehydrogenase Rossmann domain ND437_05615 PF08125 Mannitol dehydrogenase C-terminal domain ND437_05620 PF03786 D-mannonate dehydratase (UxuA) ND437_05625 PF01132 Elongation factor P (EF-P) OB domain ND437_05625 PF08207 Elongation factor P (EF-P) KOW-like domain ND437_05625 PF09285 Elongation factor P, C-terminal ND437_05630 PF03222 Tryptophan/tyrosine permease family ND437_05635 PF03692 Putative zinc- or iron-chelating domain ND437_05640 PF18364 Molybdopterin oxidoreductase N-terminal domain ND437_05640 PF01568 Molydopterin dinucleotide binding domain ND437_05640 PF00384 Molybdopterin oxidoreductase ND437_05645 PF03264 NapC/NirT cytochrome c family, N-terminal region ND437_05650 PF00293 NUDIX domain ND437_05655 PF00381 PTS HPr component phosphorylation site ND437_05655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND437_05660 PF00294 pfkB family carbohydrate kinase ND437_05665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND437_05665 PF02378 Phosphotransferase system, EIIC ND437_05670 PF01261 Xylose isomerase-like TIM barrel ND437_05675 PF03601 Conserved hypothetical protein 698 ND437_05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_05685 PF03466 LysR substrate binding domain ND437_05690 PF00324 Amino acid permease ND437_05700 PF01032 FecCD transport family ND437_05705 PF00005 ABC transporter ND437_05710 PF07715 TonB-dependent Receptor Plug Domain ND437_05710 PF00593 TonB dependent receptor ND437_05715 PF13520 Amino acid permease ND437_05720 PF08411 Exonuclease C-terminal ND437_05720 PF00929 Exonuclease ND437_05730 PF04632 Fusaric acid resistance protein family ND437_05735 PF04363 Protein of unknown function (DUF496) ND437_05750 PF00005 ABC transporter ND437_05750 PF08402 TOBE domain ND437_05755 PF00528 Binding-protein-dependent transport system inner membrane component ND437_05765 PF07690 Major Facilitator Superfamily ND437_05770 PF05231 MASE1 ND437_05770 PF07730 Histidine kinase ND437_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_05775 PF00072 Response regulator receiver domain ND437_05775 PF00196 Bacterial regulatory proteins, luxR family ND437_05780 PF12431 Transcriptional regulator ND437_05780 PF00072 Response regulator receiver domain ND437_05785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_05785 PF00989 PAS fold ND437_05785 PF17203 Single cache domain 3 ND437_05785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND437_05790 PF08218 Citrate lyase ligase C-terminal domain ND437_05795 PF06857 Malonate decarboxylase delta subunit (MdcD) ND437_05800 PF03328 HpcH/HpaI aldolase/citrate lyase family ND437_05805 PF04223 Citrate lyase, alpha subunit (CitF) ND437_05810 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND437_05815 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND437_05820 PF00939 Sodium:sulfate symporter transmembrane region ND437_05825 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND437_05825 PF01648 4'-phosphopantetheinyl transferase superfamily ND437_05845 PF06167 Glucose-regulated metallo-peptidase M90 ND437_05855 PF14001 YdfZ protein ND437_05865 PF10777 Inner membrane protein YlaC ND437_05870 PF00550 Phosphopantetheine attachment site ND437_05870 PF08659 KR domain ND437_05870 PF02801 Beta-ketoacyl synthase, C-terminal domain ND437_05870 PF00109 Beta-ketoacyl synthase, N-terminal domain ND437_05870 PF08240 Alcohol dehydrogenase GroES-like domain ND437_05870 PF00107 Zinc-binding dehydrogenase ND437_05870 PF00698 Acyl transferase domain ND437_05870 PF16197 Ketoacyl-synthetase C-terminal extension ND437_05870 PF14765 Polyketide synthase dehydratase ND437_05890 PF00356 Bacterial regulatory proteins, lacI family ND437_05895 PF00313 'Cold-shock' DNA-binding domain ND437_05900 PF10781 Dextransucrase DSRB ND437_05905 PF02203 Tar ligand binding domain homologue ND437_05905 PF00672 HAMP domain ND437_05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_05910 PF02308 MgtC family ND437_05915 PF00582 Universal stress protein family ND437_05920 PF05247 Flagellar transcriptional activator (FlhD) ND437_05925 PF05280 Flagellar transcriptional activator (FlhC) ND437_05930 PF01618 MotA/TolQ/ExbB proton channel family ND437_05935 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND437_05935 PF00691 OmpA family ND437_05940 PF01584 CheW-like domain ND437_05940 PF09078 CheY binding ND437_05940 PF02895 Signal transducing histidine kinase, homodimeric domain ND437_05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_05940 PF01627 Hpt domain ND437_05945 PF01584 CheW-like domain ND437_05950 PF02203 Tar ligand binding domain homologue ND437_05950 PF00672 HAMP domain ND437_05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_05955 PF00672 HAMP domain ND437_05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_05955 PF02203 Tar ligand binding domain homologue ND437_05960 PF01739 CheR methyltransferase, SAM binding domain ND437_05960 PF03705 CheR methyltransferase, all-alpha domain ND437_05965 PF01339 CheB methylesterase ND437_05965 PF00072 Response regulator receiver domain ND437_05970 PF00072 Response regulator receiver domain ND437_05975 PF04344 Chemotaxis phosphatase, CheZ ND437_05980 PF01483 Proprotein convertase P-domain ND437_05980 PF00082 Subtilase family ND437_05985 PF01312 FlhB HrpN YscU SpaS Family ND437_05990 PF00771 FHIPEP family ND437_05995 PF06366 Flagellar protein FlhE ND437_06000 PF05130 FlgN protein ND437_06005 PF04316 Anti-sigma-28 factor, FlgM ND437_06010 PF17656 FlgA N-terminal domain ND437_06010 PF13144 Chaperone for flagella basal body P-ring formation ND437_06015 PF00460 Flagella basal body rod protein ND437_06020 PF00460 Flagella basal body rod protein ND437_06020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND437_06025 PF03963 Flagellar hook capping protein - N-terminal region ND437_06025 PF13860 FlgD Ig-like domain ND437_06025 PF13861 FlgD Tudor-like domain ND437_06030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND437_06030 PF00460 Flagella basal body rod protein ND437_06030 PF07559 Flagellar basal body protein FlaE ND437_06035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND437_06035 PF00460 Flagella basal body rod protein ND437_06040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND437_06040 PF00460 Flagella basal body rod protein ND437_06045 PF02107 Flagellar L-ring protein ND437_06050 PF02119 Flagellar P-ring protein ND437_06055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND437_06055 PF10135 Rod binding protein ND437_06060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND437_06060 PF00460 Flagella basal body rod protein ND437_06065 PF00669 Bacterial flagellin N-terminal helical region ND437_06070 PF01311 Bacterial export proteins, family 1 ND437_06075 PF01313 Bacterial export proteins, family 3 ND437_06080 PF00813 FliP family ND437_06085 PF04347 Flagellar biosynthesis protein, FliO ND437_06090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND437_06090 PF16973 Flagellar motor switch protein FliN N-terminal ND437_06095 PF02154 Flagellar motor switch protein FliM ND437_06095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND437_06100 PF03748 Flagellar basal body-associated protein FliL ND437_06105 PF02120 Flagellar hook-length control protein FliK ND437_06110 PF02050 Flagellar FliJ protein ND437_06115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND437_06115 PF18269 T3SS EscN ATPase C-terminal domain ND437_06120 PF02108 Flagellar assembly protein FliH ND437_06125 PF01706 FliG C-terminal domain ND437_06125 PF14841 FliG middle domain ND437_06125 PF14842 FliG N-terminal domain ND437_06130 PF01514 Secretory protein of YscJ/FliF family ND437_06130 PF08345 Flagellar M-ring protein C-terminal ND437_06135 PF02049 Flagellar hook-basal body complex protein FliE ND437_06145 PF01223 DNA/RNA non-specific endonuclease ND437_06150 PF02254 TrkA-N domain ND437_06150 PF07885 Ion channel ND437_06155 PF01966 HD domain ND437_06160 PF12833 Helix-turn-helix domain ND437_06165 PF05400 Flagellar protein FliT ND437_06170 PF02561 Flagellar protein FliS ND437_06175 PF07196 Flagellin hook IN motif ND437_06175 PF07195 Flagellar hook-associated protein 2 C-terminus ND437_06175 PF02465 Flagellar hook-associated protein 2 N-terminus ND437_06180 PF00700 Bacterial flagellin C-terminal helical region ND437_06180 PF08884 Flagellin D3 domain ND437_06180 PF00669 Bacterial flagellin N-terminal helical region ND437_06185 PF00700 Bacterial flagellin C-terminal helical region ND437_06185 PF08884 Flagellin D3 domain ND437_06185 PF00669 Bacterial flagellin N-terminal helical region ND437_06190 PF00700 Bacterial flagellin C-terminal helical region ND437_06190 PF00669 Bacterial flagellin N-terminal helical region ND437_06190 PF08884 Flagellin D3 domain ND437_06195 PF00700 Bacterial flagellin C-terminal helical region ND437_06195 PF08884 Flagellin D3 domain ND437_06195 PF00669 Bacterial flagellin N-terminal helical region ND437_06200 PF04542 Sigma-70 region 2 ND437_06200 PF04539 Sigma-70 region 3 ND437_06200 PF04545 Sigma-70, region 4 ND437_06205 PF02899 Phage integrase, N-terminal SAM-like domain ND437_06210 PF00291 Pyridoxal-phosphate dependent enzyme ND437_06215 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_06220 PF00528 Binding-protein-dependent transport system inner membrane component ND437_06225 PF00005 ABC transporter ND437_06230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND437_06230 PF00171 Aldehyde dehydrogenase family ND437_06230 PF01619 Proline dehydrogenase ND437_06230 PF14850 DNA-binding domain of Proline dehydrogenase ND437_06235 PF00474 Sodium:solute symporter family ND437_06240 PF18500 CadC C-terminal domain 1 ND437_06240 PF00486 Transcriptional regulatory protein, C terminal ND437_06245 PF13520 Amino acid permease ND437_06250 PF01276 Orn/Lys/Arg decarboxylase, major domain ND437_06250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND437_06250 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND437_06255 PF00324 Amino acid permease ND437_06275 PF10769 Protein of unknown function (DUF2594) ND437_06280 PF00072 Response regulator receiver domain ND437_06280 PF00196 Bacterial regulatory proteins, luxR family ND437_06285 PF01541 GIY-YIG catalytic domain ND437_06285 PF02151 UvrB/uvrC motif ND437_06285 PF08459 UvrC Helix-hairpin-helix N-terminal ND437_06290 PF01066 CDP-alcohol phosphatidyltransferase ND437_06310 PF13276 HTH-like domain ND437_06310 PF00665 Integrase core domain ND437_06310 PF13333 Integrase core domain ND437_06315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_06315 PF00672 HAMP domain ND437_06315 PF02203 Tar ligand binding domain homologue ND437_06325 PF00005 ABC transporter ND437_06330 PF00528 Binding-protein-dependent transport system inner membrane component ND437_06345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ND437_06345 PF00034 Cytochrome c ND437_06355 PF13673 Acetyltransferase (GNAT) domain ND437_06385 PF04960 Glutaminase ND437_06390 PF13520 Amino acid permease ND437_06395 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND437_06400 PF00849 RNA pseudouridylate synthase ND437_06415 PF13520 Amino acid permease ND437_06425 PF03553 Na+/H+ antiporter family ND437_06430 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND437_06445 PF00849 RNA pseudouridylate synthase ND437_06445 PF01479 S4 domain ND437_06450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND437_06455 PF02378 Phosphotransferase system, EIIC ND437_06460 PF00232 Glycosyl hydrolase family 1 ND437_06465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND437_06470 PF07883 Cupin domain ND437_06470 PF12833 Helix-turn-helix domain ND437_06475 PF04794 YdjC-like protein ND437_06485 PF00313 'Cold-shock' DNA-binding domain ND437_06490 PF00313 'Cold-shock' DNA-binding domain ND437_06495 PF00313 'Cold-shock' DNA-binding domain ND437_06500 PF08241 Methyltransferase domain ND437_06515 PF07478 D-ala D-ala ligase C-terminus ND437_06515 PF01820 D-ala D-ala ligase N-terminus ND437_06520 PF06411 HdeA/HdeB family ND437_06530 PF03372 Endonuclease/Exonuclease/phosphatase family ND437_06535 PF00360 Phytochrome region ND437_06535 PF00990 Diguanylate cyclase, GGDEF domain ND437_06535 PF01590 GAF domain ND437_06535 PF00563 EAL domain ND437_06545 PF00005 ABC transporter ND437_06545 PF00664 ABC transporter transmembrane region ND437_06550 PF13520 Amino acid permease ND437_06565 PF12833 Helix-turn-helix domain ND437_06570 PF10964 Protein of unknown function (DUF2766) ND437_06575 PF13996 YobH-like protein ND437_06580 PF13998 MgrB protein ND437_06585 PF13974 YebO-like protein ND437_06600 PF00324 Amino acid permease ND437_06605 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND437_06610 PF10736 Protein of unknown function (DUF2627) ND437_06615 PF00313 'Cold-shock' DNA-binding domain ND437_06620 PF02578 Multi-copper polyphenol oxidoreductase laccase ND437_06625 PF00905 Penicillin binding protein transpeptidase domain ND437_06625 PF03717 Penicillin-binding Protein dimerisation domain ND437_06630 PF13847 Methyltransferase domain ND437_06650 PF07690 Major Facilitator Superfamily ND437_06655 PF00550 Phosphopantetheine attachment site ND437_06655 PF00668 Condensation domain ND437_06655 PF13193 AMP-binding enzyme C-terminal domain ND437_06655 PF00501 AMP-binding enzyme ND437_06660 PF00732 GMC oxidoreductase ND437_06660 PF05199 GMC oxidoreductase ND437_06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND437_06670 PF02770 Acyl-CoA dehydrogenase, middle domain ND437_06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND437_06685 PF02441 Flavoprotein ND437_06690 PF02659 Putative manganese efflux pump ND437_06695 PF06173 Protein of unknown function (DUF986) ND437_06700 PF03613 PTS system mannose/fructose/sorbose family IID component ND437_06705 PF03609 PTS system sorbose-specific iic component ND437_06710 PF03830 PTS system sorbose subfamily IIB component ND437_06710 PF03610 PTS system fructose IIA component ND437_06715 PF03471 Transporter associated domain ND437_06715 PF03741 Integral membrane protein TerC family ND437_06720 PF03315 Serine dehydratase beta chain ND437_06720 PF03313 Serine dehydratase alpha chain ND437_06725 PF00293 NUDIX domain ND437_06730 PF04715 Anthranilate synthase component I, N terminal region ND437_06730 PF00425 chorismate binding enzyme ND437_06735 PF03701 Uncharacterised protein family (UPF0181) ND437_06740 PF02222 ATP-grasp domain ND437_06745 PF03880 DbpA RNA binding domain ND437_06745 PF00270 DEAD/DEAH box helicase ND437_06745 PF00271 Helicase conserved C-terminal domain ND437_06750 PF07130 YebG protein ND437_06755 PF04266 ASCH domain ND437_06760 PF13995 YebF-like protein ND437_06765 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND437_06765 PF00326 Prolyl oligopeptidase family ND437_06770 PF00929 Exonuclease ND437_06775 PF00561 alpha/beta hydrolase fold ND437_06780 PF06440 DNA polymerase III, theta subunit ND437_06785 PF00210 Ferritin-like domain ND437_06790 PF04234 CopC domain ND437_06795 PF05425 Copper resistance protein D ND437_06800 PF10709 Protein of unknown function (DUF2511) ND437_06805 PF02899 Phage integrase, N-terminal SAM-like domain ND437_06805 PF00589 Phage integrase family ND437_06810 PF04606 Ogr/Delta-like zinc finger ND437_06850 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND437_06855 PF07484 Phage Tail Collar Domain ND437_06960 PF05840 Bacteriophage replication gene A protein (GPA) ND437_06995 PF16452 Bacteriophage CI repressor C-terminal domain ND437_06995 PF07022 Bacteriophage CI repressor helix-turn-helix domain ND437_07020 PF00144 Beta-lactamase ND437_07040 PF10753 Toxin GhoT_OrtT ND437_07045 PF03783 Curli production assembly/transport component CsgG ND437_07055 PF05643 Putative bacterial lipoprotein (DUF799) ND437_07080 PF07351 Protein of unknown function (DUF1480) ND437_07085 PF00360 Phytochrome region ND437_07085 PF00563 EAL domain ND437_07085 PF01590 GAF domain ND437_07085 PF00990 Diguanylate cyclase, GGDEF domain ND437_07090 PF02470 MlaD protein ND437_07095 PF04403 Paraquat-inducible protein A ND437_07100 PF13185 GAF domain ND437_07105 PF17516 ProQ C-terminal domain ND437_07105 PF04352 ProQ/FINO family ND437_07110 PF17804 Tail specific protease N-terminal domain ND437_07110 PF03572 Peptidase family S41 ND437_07110 PF00595 PDZ domain ND437_07110 PF11818 C-terminal domain of tail specific protease (DUF3340) ND437_07115 PF01435 Peptidase family M48 ND437_07125 PF07690 Major Facilitator Superfamily ND437_07130 PF09339 IclR helix-turn-helix domain ND437_07130 PF01614 Bacterial transcriptional regulator ND437_07135 PF01510 N-acetylmuramoyl-L-alanine amidase ND437_07140 PF00375 Sodium:dicarboxylate symporter family ND437_07145 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND437_07150 PF13419 Haloacid dehalogenase-like hydrolase ND437_07155 PF14002 YniB-like protein ND437_07160 PF03881 Fructosamine kinase ND437_07165 PF00950 ABC 3 transport family ND437_07170 PF00950 ABC 3 transport family ND437_07175 PF00005 ABC transporter ND437_07180 PF01297 Zinc-uptake complex component A periplasmic ND437_07185 PF01464 Transglycosylase SLT domain ND437_07190 PF01914 MarC family integral membrane protein ND437_07220 PF03129 Anticodon binding domain ND437_07220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND437_07220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND437_07220 PF02824 TGS domain ND437_07225 PF05198 Translation initiation factor IF-3, N-terminal domain ND437_07225 PF00707 Translation initiation factor IF-3, C-terminal domain ND437_07230 PF01632 Ribosomal protein L35 ND437_07235 PF00453 Ribosomal protein L20 ND437_07240 PF01409 tRNA synthetases class II core domain (F) ND437_07240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND437_07245 PF03484 tRNA synthetase B5 domain ND437_07245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND437_07245 PF01588 Putative tRNA binding domain ND437_07245 PF03147 Ferredoxin-fold anticodon binding domain ND437_07245 PF03483 B3/4 domain ND437_07250 PF00216 Bacterial DNA-binding protein ND437_07260 PF04606 Ogr/Delta-like zinc finger ND437_07310 PF09553 Eco47II restriction endonuclease ND437_07315 PF13411 MerR HTH family regulatory protein ND437_07315 PF00145 C-5 cytosine-specific DNA methylase ND437_07320 PF01032 FecCD transport family ND437_07325 PF00005 ABC transporter ND437_07330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND437_07335 PF00535 Glycosyl transferase family 2 ND437_07340 PF00551 Formyl transferase ND437_07340 PF02911 Formyl transferase, C-terminal domain ND437_07340 PF01370 NAD dependent epimerase/dehydratase family ND437_07345 PF01522 Polysaccharide deacetylase ND437_07350 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND437_07355 PF00892 EamA-like transporter family ND437_07365 PF00877 NlpC/P60 family ND437_07370 PF10437 Bacterial lipoate protein ligase C-terminus ND437_07370 PF03099 Biotin/lipoate A/B protein ligase family ND437_07375 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND437_07380 PF00005 ABC transporter ND437_07385 PF01032 FecCD transport family ND437_07390 PF01497 Periplasmic binding protein ND437_07395 PF05171 Haemin-degrading HemS.ChuX domain ND437_07400 PF00593 TonB dependent receptor ND437_07400 PF07715 TonB-dependent Receptor Plug Domain ND437_07405 PF10636 Hemin uptake protein hemP ND437_07410 PF00793 DAHP synthetase I family ND437_07415 PF03618 Kinase/pyrophosphorylase ND437_07420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND437_07420 PF00391 PEP-utilising enzyme, mobile domain ND437_07420 PF02896 PEP-utilising enzyme, TIM barrel domain ND437_07430 PF01594 AI-2E family transporter ND437_07435 PF02913 FAD linked oxidases, C-terminal domain ND437_07435 PF01565 FAD binding domain ND437_07435 PF13183 4Fe-4S dicluster domain ND437_07440 PF03061 Thioesterase superfamily ND437_07445 PF01521 Iron-sulphur cluster biosynthesis ND437_07450 PF01458 Uncharacterized protein family (UPF0051) ND437_07455 PF00005 ABC transporter ND437_07460 PF01458 Uncharacterized protein family (UPF0051) ND437_07465 PF00266 Aminotransferase class-V ND437_07470 PF02657 Fe-S metabolism associated domain ND437_07475 PF17969 L,D-transpeptidase C-terminal domain ND437_07475 PF01476 LysM domain ND437_07475 PF03734 L,D-transpeptidase catalytic domain ND437_07480 PF04728 Lipoprotein leucine-zipper ND437_07485 PF00224 Pyruvate kinase, barrel domain ND437_07485 PF02887 Pyruvate kinase, alpha/beta domain ND437_07505 PF01554 MatE ND437_07510 PF00677 Lumazine binding domain ND437_07520 PF07690 Major Facilitator Superfamily ND437_07525 PF03466 LysR substrate binding domain ND437_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_07530 PF00356 Bacterial regulatory proteins, lacI family ND437_07540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND437_07540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND437_07545 PF00877 NlpC/P60 family ND437_07550 PF00462 Glutaredoxin ND437_07555 PF00929 Exonuclease ND437_07560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND437_07565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND437_07570 PF16925 Tetracyclin repressor-like, C-terminal domain ND437_07570 PF00440 Bacterial regulatory proteins, tetR family ND437_07575 PF00884 Sulfatase ND437_07575 PF08019 Phosphoethanolamine transferase EptA/EptB ND437_07580 PF06945 Protein of unknown function (DUF1289) ND437_07585 PF00248 Aldo/keto reductase family ND437_07595 PF01047 MarR family ND437_07600 PF05433 Glycine zipper 2TM domain ND437_07605 PF03702 Anhydro-N-acetylmuramic acid kinase ND437_07610 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND437_07610 PF01243 Pyridoxamine 5'-phosphate oxidase ND437_07615 PF01479 S4 domain ND437_07615 PF00579 tRNA synthetases class I (W and Y) ND437_07620 PF08543 Phosphomethylpyrimidine kinase ND437_07625 PF00043 Glutathione S-transferase, C-terminal domain ND437_07625 PF02798 Glutathione S-transferase, N-terminal domain ND437_07630 PF11656 YjbD family (DUF3811) ND437_07640 PF04893 Yip1 domain ND437_07650 PF00226 DnaJ domain ND437_07650 PF01556 DnaJ C terminal domain ND437_07660 PF00854 POT family ND437_07670 PF00005 ABC transporter ND437_07675 PF00005 ABC transporter ND437_07675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_07680 PF00528 Binding-protein-dependent transport system inner membrane component ND437_07680 PF12911 N-terminal TM domain of oligopeptide transport permease C ND437_07685 PF00528 Binding-protein-dependent transport system inner membrane component ND437_07690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_07695 PF02917 Pertussis toxin, subunit 1 ND437_07705 PF02954 Bacterial regulatory protein, Fis family ND437_07705 PF00158 Sigma-54 interaction domain ND437_07710 PF04012 PspA/IM30 family ND437_07715 PF06667 Phage shock protein B ND437_07720 PF04024 PspC domain ND437_07725 PF09584 Phage shock protein PspD (Phageshock_PspD) ND437_07730 PF04317 YcjX-like family, DUF463 ND437_07735 PF05128 Domain of unknown function (DUF697) ND437_07740 PF08808 RES domain ND437_07745 PF09722 Protein of unknown function (DUF2384) ND437_07750 PF18024 Helix-turn-helix domain ND437_07750 PF00158 Sigma-54 interaction domain ND437_07755 PF08534 Redoxin ND437_07760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND437_07760 PF13378 Enolase C-terminal domain-like ND437_07765 PF00246 Zinc carboxypeptidase ND437_07770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_07775 PF01544 CorA-like Mg2+ transporter protein ND437_07780 PF01171 PP-loop family ND437_07785 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND437_07785 PF10371 Domain of unknown function ND437_07785 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND437_07785 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND437_07785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND437_07790 PF00893 Small Multidrug Resistance protein ND437_07795 PF02308 MgtC family ND437_07800 PF03891 Domain of unknown function (DUF333) ND437_07805 PF03724 META domain ND437_07810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND437_07810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND437_07815 PF11739 Dicarboxylate transport ND437_07825 PF13617 YnbE-like lipoprotein ND437_07830 PF07027 Protein of unknown function (DUF1318) ND437_07835 PF02525 Flavodoxin-like fold ND437_07840 PF11898 Domain of unknown function (DUF3418) ND437_07840 PF04408 Helicase associated domain (HA2) ND437_07840 PF00271 Helicase conserved C-terminal domain ND437_07840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND437_07840 PF00270 DEAD/DEAH box helicase ND437_07845 PF00089 Trypsin ND437_07855 PF01161 Phosphatidylethanolamine-binding protein ND437_07860 PF12833 Helix-turn-helix domain ND437_07865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND437_07870 PF00080 Copper/zinc superoxide dismutase (SODC) ND437_07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_07875 PF00512 His Kinase A (phospho-acceptor) domain ND437_07875 PF00672 HAMP domain ND437_07880 PF00072 Response regulator receiver domain ND437_07880 PF00486 Transcriptional regulatory protein, C terminal ND437_07890 PF13520 Amino acid permease ND437_07895 PF07338 Protein of unknown function (DUF1471) ND437_07900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND437_07900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND437_07900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND437_07905 PF02233 NAD(P) transhydrogenase beta subunit ND437_07910 PF01261 Xylose isomerase-like TIM barrel ND437_07915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND437_07920 PF00596 Class II Aldolase and Adducin N-terminal domain ND437_07925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND437_07930 PF03611 PTS system sugar-specific permease component ND437_07935 PF00455 DeoR C terminal sensor domain ND437_07935 PF08220 DeoR-like helix-turn-helix domain ND437_07945 PF00582 Universal stress protein family ND437_07950 PF00027 Cyclic nucleotide-binding domain ND437_07950 PF13545 Crp-like helix-turn-helix domain ND437_07955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND437_07955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND437_07960 PF06445 GyrI-like small molecule binding domain ND437_07970 PF13419 Haloacid dehalogenase-like hydrolase ND437_08010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND437_08010 PF01048 Phosphorylase superfamily ND437_08030 PF01510 N-acetylmuramoyl-L-alanine amidase ND437_08035 PF00106 short chain dehydrogenase ND437_08040 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND437_08045 PF06932 Protein of unknown function (DUF1283) ND437_08050 PF06649 Protein of unknown function (DUF1161) ND437_08055 PF00654 Voltage gated chloride channel ND437_08065 PF00480 ROK family ND437_08070 PF05472 DNA replication terminus site-binding protein (Ter protein) ND437_08075 PF00206 Lyase ND437_08075 PF10415 Fumarase C C-terminus ND437_08080 PF01238 Phosphomannose isomerase type I ND437_08085 PF06097 Bacterial protein of unknown function (DUF945) ND437_08090 PF00962 Adenosine/AMP deaminase ND437_08095 PF13593 SBF-like CPA transporter family (DUF4137) ND437_08100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND437_08100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND437_08105 PF03848 Tellurite resistance protein TehB ND437_08105 PF09313 Domain of unknown function (DUF1971) ND437_08110 PF01268 Formate--tetrahydrofolate ligase ND437_08115 PF10754 Protein of unknown function (DUF2569) ND437_08120 PF02508 Rnf-Nqr subunit, membrane protein ND437_08125 PF04060 Putative Fe-S cluster ND437_08130 PF13237 4Fe-4S dicluster domain ND437_08130 PF13375 RnfC Barrel sandwich hybrid domain ND437_08130 PF10531 SLBB domain ND437_08130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND437_08135 PF06445 GyrI-like small molecule binding domain ND437_08135 PF12833 Helix-turn-helix domain ND437_08140 PF03116 NQR2, RnfD, RnfE family ND437_08145 PF04205 FMN-binding domain ND437_08150 PF02508 Rnf-Nqr subunit, membrane protein ND437_08155 PF10576 Iron-sulfur binding domain of endonuclease III ND437_08155 PF00633 Helix-hairpin-helix motif ND437_08155 PF00730 HhH-GPD superfamily base excision DNA repair protein ND437_08160 PF00575 S1 RNA binding domain ND437_08160 PF08206 Ribonuclease B OB domain ND437_08160 PF00773 RNB domain ND437_08165 PF00563 EAL domain ND437_08165 PF05231 MASE1 ND437_08165 PF08447 PAS fold ND437_08165 PF08448 PAS fold ND437_08165 PF13426 PAS domain ND437_08165 PF00990 Diguanylate cyclase, GGDEF domain ND437_08170 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND437_08175 PF05433 Glycine zipper 2TM domain ND437_08180 PF01253 Translation initiation factor SUI1 ND437_08185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND437_08190 PF07338 Protein of unknown function (DUF1471) ND437_08200 PF18073 Rubredoxin metal binding domain ND437_08205 PF06305 Lipopolysaccharide assembly protein A domain ND437_08210 PF01569 PAP2 superfamily ND437_08215 PF00925 GTP cyclohydrolase II ND437_08220 PF00330 Aconitase family (aconitate hydratase) ND437_08220 PF00694 Aconitase C-terminal domain ND437_08240 PF03466 LysR substrate binding domain ND437_08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_08245 PF01751 Toprim domain ND437_08245 PF01396 Topoisomerase DNA binding C4 zinc finger ND437_08245 PF08272 Topoisomerase I zinc-ribbon-like ND437_08245 PF01131 DNA topoisomerase ND437_08250 PF10692 Protein of unknown function (DUF2498) ND437_08255 PF01343 Peptidase family S49 ND437_08255 PF08496 Peptidase family S49 N-terminal ND437_08260 PF00106 short chain dehydrogenase ND437_08265 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND437_08270 PF00849 RNA pseudouridylate synthase ND437_08270 PF01479 S4 domain ND437_08275 PF01300 Telomere recombination ND437_08280 PF02811 PHP domain ND437_08285 PF00425 chorismate binding enzyme ND437_08285 PF04715 Anthranilate synthase component I, N terminal region ND437_08290 PF00117 Glutamine amidotransferase class-I ND437_08295 PF02885 Glycosyl transferase family, helical bundle domain ND437_08295 PF00591 Glycosyl transferase family, a/b domain ND437_08300 PF00218 Indole-3-glycerol phosphate synthase ND437_08300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND437_08305 PF00291 Pyridoxal-phosphate dependent enzyme ND437_08310 PF00290 Tryptophan synthase alpha chain ND437_08320 PF03922 OmpW family ND437_08325 PF03692 Putative zinc- or iron-chelating domain ND437_08335 PF01740 STAS domain ND437_08335 PF00916 Sulfate permease family ND437_08340 PF04279 Intracellular septation protein A ND437_08345 PF03061 Thioesterase superfamily ND437_08350 PF03544 Gram-negative bacterial TonB protein C-terminal ND437_08370 PF13953 PapC C-terminal domain ND437_08370 PF13954 PapC N-terminal domain ND437_08370 PF00577 Outer membrane usher protein ND437_08375 PF02753 Pili assembly chaperone PapD, C-terminal domain ND437_08375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_08385 PF00486 Transcriptional regulatory protein, C terminal ND437_08400 PF03795 YCII-related domain ND437_08420 PF13091 PLD-like domain ND437_08420 PF13396 Phospholipase_D-nuclease N-terminal ND437_08425 PF04269 Protein of unknown function, DUF440 ND437_08430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_08430 PF00005 ABC transporter ND437_08435 PF00005 ABC transporter ND437_08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND437_08440 PF00528 Binding-protein-dependent transport system inner membrane component ND437_08440 PF12911 N-terminal TM domain of oligopeptide transport permease C ND437_08445 PF00528 Binding-protein-dependent transport system inner membrane component ND437_08450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_08455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_08460 PF01914 MarC family integral membrane protein ND437_08470 PF00171 Aldehyde dehydrogenase family ND437_08470 PF00465 Iron-containing alcohol dehydrogenase ND437_08475 PF00265 Thymidine kinase ND437_08480 PF00816 H-NS histone family ND437_08485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND437_08485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND437_08485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND437_08490 PF00072 Response regulator receiver domain ND437_08495 PF01734 Patatin-like phospholipase ND437_08500 PF02810 SEC-C motif ND437_08505 PF00551 Formyl transferase ND437_08505 PF01842 ACT domain ND437_08520 PF03466 LysR substrate binding domain ND437_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_08530 PF03372 Endonuclease/Exonuclease/phosphatase family ND437_08535 PF00293 NUDIX domain ND437_08540 PF07383 Protein of unknown function (DUF1496) ND437_08545 PF01751 Toprim domain ND437_08545 PF01131 DNA topoisomerase ND437_08550 PF02769 AIR synthase related protein, C-terminal domain ND437_08550 PF00586 AIR synthase related protein, N-terminal domain ND437_08555 PF00881 Nitroreductase family ND437_08560 PF01343 Peptidase family S49 ND437_08565 PF17763 Glutaminase/Asparaginase C-terminal domain ND437_08565 PF00710 Asparaginase, N-terminal ND437_08570 PF00857 Isochorismatase family ND437_08575 PF07023 Protein of unknown function (DUF1315) ND437_08580 PF01641 SelR domain ND437_08585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND437_08585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND437_08590 PF01263 Aldose 1-epimerase ND437_08595 PF00884 Sulfatase ND437_08600 PF06629 MltA-interacting protein MipA ND437_08605 PF06798 PrkA serine protein kinase C-terminal domain ND437_08605 PF08298 PrkA AAA domain ND437_08610 PF04285 Protein of unknown function (DUF444) ND437_08615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND437_08615 PF00205 Thiamine pyrophosphate enzyme, central domain ND437_08615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND437_08620 PF03306 Alpha-acetolactate decarboxylase ND437_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_08625 PF03466 LysR substrate binding domain ND437_08630 PF00563 EAL domain ND437_08630 PF00990 Diguanylate cyclase, GGDEF domain ND437_08630 PF13426 PAS domain ND437_08640 PF07690 Major Facilitator Superfamily ND437_08645 PF00842 Alanine racemase, C-terminal domain ND437_08645 PF01168 Alanine racemase, N-terminal domain ND437_08650 PF01266 FAD dependent oxidoreductase ND437_08655 PF04293 SpoVR like protein ND437_08660 PF00392 Bacterial regulatory proteins, gntR family ND437_08660 PF07840 FadR C-terminal domain ND437_08665 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND437_08670 PF02600 Disulfide bond formation protein DsbB ND437_08685 PF03692 Putative zinc- or iron-chelating domain ND437_08690 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND437_08695 PF05166 YcgL domain ND437_08700 PF05209 Septum formation inhibitor MinC, N-terminal domain ND437_08700 PF03775 Septum formation inhibitor MinC, C-terminal domain ND437_08705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND437_08710 PF03776 Septum formation topological specificity factor MinE ND437_08715 PF00570 HRDC domain ND437_08715 PF01612 3'-5' exonuclease ND437_08720 PF13193 AMP-binding enzyme C-terminal domain ND437_08720 PF00501 AMP-binding enzyme ND437_08725 PF03843 Outer membrane lipoprotein Slp family ND437_08730 PF00814 Glycoprotease family ND437_08735 PF04851 Type III restriction enzyme, res subunit ND437_08735 PF13307 Helicase C-terminal domain ND437_08740 PF01042 Endoribonuclease L-PSP ND437_08745 PF00893 Small Multidrug Resistance protein ND437_08750 PF00893 Small Multidrug Resistance protein ND437_08755 PF01081 KDPG and KHG aldolase ND437_08760 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND437_08760 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND437_08765 PF01380 SIS domain ND437_08765 PF01418 Helix-turn-helix domain, rpiR family ND437_08770 PF00224 Pyruvate kinase, barrel domain ND437_08770 PF02887 Pyruvate kinase, alpha/beta domain ND437_08775 PF03279 Bacterial lipid A biosynthesis acyltransferase ND437_08780 PF01476 LysM domain ND437_08780 PF08525 Opacity-associated protein A N-terminal motif ND437_08780 PF01551 Peptidase family M23 ND437_08785 PF01297 Zinc-uptake complex component A periplasmic ND437_08790 PF00005 ABC transporter ND437_08795 PF00950 ABC 3 transport family ND437_08800 PF00854 POT family ND437_08805 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND437_08805 PF05491 RuvB C-terminal winged helix domain ND437_08805 PF17864 RuvB AAA lid domain ND437_08810 PF01330 RuvA N terminal domain ND437_08810 PF07499 RuvA, C-terminal domain ND437_08815 PF02075 Crossover junction endodeoxyribonuclease RuvC ND437_08820 PF01709 Transcriptional regulator ND437_08825 PF00293 NUDIX domain ND437_08830 PF02938 GAD domain ND437_08830 PF00152 tRNA synthetases class II (D, K and N) ND437_08830 PF01336 OB-fold nucleic acid binding domain ND437_08840 PF01904 Protein of unknown function DUF72 ND437_08845 PF01124 MAPEG family ND437_08850 PF13649 Methyltransferase domain ND437_08855 PF08003 Protein of unknown function (DUF1698) ND437_08860 PF03932 CutC family ND437_08865 PF06185 YecM protein ND437_08870 PF03485 Arginyl tRNA synthetase N terminal domain ND437_08870 PF05746 DALR anticodon binding domain ND437_08870 PF00750 tRNA synthetases class I (R) ND437_08880 PF05860 haemagglutination activity domain ND437_08880 PF13332 Hemagglutinin repeat ND437_08885 PF17287 POTRA domain ND437_08885 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ND437_08885 PF08479 POTRA domain, ShlB-type ND437_08890 PF03023 Lipid II flippase MurJ ND437_08895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND437_08900 PF04337 Protein of unknown function, DUF480 ND437_08905 PF13302 Acetyltransferase (GNAT) domain ND437_08910 PF07690 Major Facilitator Superfamily ND437_08920 PF07273 Protein of unknown function (DUF1439) ND437_08925 PF02613 Nitrate reductase delta subunit ND437_08930 PF02811 PHP domain ND437_08935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND437_08940 PF00854 POT family ND437_08950 PF03009 Glycerophosphoryl diester phosphodiesterase family ND437_08960 PF00990 Diguanylate cyclase, GGDEF domain ND437_08965 PF01740 STAS domain ND437_08965 PF00916 Sulfate permease family ND437_08970 PF00793 DAHP synthetase I family ND437_08975 PF13369 Transglutaminase-like superfamily ND437_08980 PF04247 Invasion gene expression up-regulator, SirB ND437_08985 PF17827 PrmC N-terminal domain ND437_08985 PF13847 Methyltransferase domain ND437_08990 PF03462 PCRF domain ND437_08990 PF00472 RF-1 domain ND437_08995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND437_08995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND437_08995 PF01488 Shikimate / quinate 5-dehydrogenase ND437_09000 PF03550 Outer membrane lipoprotein LolB ND437_09005 PF00288 GHMP kinases N terminal domain ND437_09005 PF08544 GHMP kinases C terminal ND437_09010 PF14572 Phosphoribosyl synthetase-associated domain ND437_09010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND437_09015 PF10762 Protein of unknown function (DUF2583) ND437_09020 PF01195 Peptidyl-tRNA hydrolase ND437_09030 PF01926 50S ribosome-binding GTPase ND437_09030 PF06071 Protein of unknown function (DUF933) ND437_09045 PF01590 GAF domain ND437_09045 PF02954 Bacterial regulatory protein, Fis family ND437_09045 PF00158 Sigma-54 interaction domain ND437_09050 PF00586 AIR synthase related protein, N-terminal domain ND437_09050 PF02769 AIR synthase related protein, C-terminal domain ND437_09055 PF01924 Hydrogenase formation hypA family ND437_09060 PF01455 HupF/HypC family ND437_09065 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND437_09070 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND437_09075 PF11046 Transcriptional repressor of hyc and hyp operons ND437_09080 PF13247 4Fe-4S dicluster domain ND437_09085 PF00361 Proton-conducting membrane transporter ND437_09090 PF00146 NADH dehydrogenase ND437_09095 PF00374 Nickel-dependent hydrogenase ND437_09095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND437_09095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND437_09100 PF12838 4Fe-4S dicluster domain ND437_09105 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND437_09110 PF07450 Formate hydrogenlyase maturation protein HycH ND437_09115 PF01750 Hydrogenase maturation protease ND437_09120 PF13247 4Fe-4S dicluster domain ND437_09120 PF12800 4Fe-4S binding domain ND437_09125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND437_09125 PF00384 Molybdopterin oxidoreductase ND437_09125 PF01568 Molydopterin dinucleotide binding domain ND437_09130 PF00708 Acylphosphatase ND437_09130 PF17788 HypF Kae1-like domain ND437_09130 PF01300 Telomere recombination ND437_09130 PF07503 HypF finger ND437_09135 PF03824 High-affinity nickel-transport protein ND437_09145 PF03466 LysR substrate binding domain ND437_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_09150 PF05962 HutD ND437_09155 PF01979 Amidohydrolase family ND437_09160 PF00392 Bacterial regulatory proteins, gntR family ND437_09160 PF07702 UTRA domain ND437_09165 PF01979 Amidohydrolase family ND437_09175 PF00267 Gram-negative porin ND437_09185 PF04996 Succinylarginine dihydrolase ND437_09190 PF00171 Aldehyde dehydrogenase family ND437_09195 PF04958 Arginine N-succinyltransferase beta subunit ND437_09200 PF00202 Aminotransferase class-III ND437_09205 PF00155 Aminotransferase class I and II ND437_09205 PF00392 Bacterial regulatory proteins, gntR family ND437_09210 PF01654 Cytochrome bd terminal oxidase subunit I ND437_09215 PF02322 Cytochrome bd terminal oxidase subunit II ND437_09225 PF00672 HAMP domain ND437_09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_09225 PF07730 Histidine kinase ND437_09225 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND437_09230 PF08021 Siderophore-interacting FAD-binding domain ND437_09230 PF04954 Siderophore-interacting protein ND437_09235 PF01699 Sodium/calcium exchanger protein ND437_09240 PF02562 PhoH-like protein ND437_09245 PF02311 AraC-like ligand binding domain ND437_09245 PF12833 Helix-turn-helix domain ND437_09260 PF02321 Outer membrane efflux protein ND437_09265 PF00529 HlyD membrane-fusion protein of T1SS ND437_09270 PF00664 ABC transporter transmembrane region ND437_09270 PF00005 ABC transporter ND437_09275 PF02974 Protease inhibitor Inh ND437_09280 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND437_09280 PF00413 Matrixin ND437_09280 PF08548 Peptidase M10 serralysin C terminal ND437_09285 PF00939 Sodium:sulfate symporter transmembrane region ND437_09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_09290 PF00989 PAS fold ND437_09290 PF17203 Single cache domain 3 ND437_09290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND437_09295 PF00072 Response regulator receiver domain ND437_09300 PF03390 2-hydroxycarboxylate transporter family ND437_09310 PF01432 Peptidase family M3 ND437_09320 PF00232 Glycosyl hydrolase family 1 ND437_09325 PF00765 Autoinducer synthase ND437_09330 PF03472 Autoinducer binding domain ND437_09330 PF00196 Bacterial regulatory proteins, luxR family ND437_09455 PF03354 Phage Terminase ND437_09470 PF09669 Phage regulatory protein Rha (Phage_pRha) ND437_09470 PF10549 ORF11CD3 domain ND437_09480 PF00182 Chitinase class I ND437_09505 PF01555 DNA methylase ND437_09515 PF06147 Protein of unknown function (DUF968) ND437_09535 PF05063 MT-A70 ND437_09540 PF03354 Phage Terminase ND437_09565 PF01381 Helix-turn-helix ND437_09565 PF00717 Peptidase S24-like ND437_09590 PF10065 Uncharacterized conserved protein (DUF2303) ND437_09610 PF07825 Excisionase-like protein ND437_09615 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ND437_09615 PF00589 Phage integrase family ND437_09620 PF00180 Isocitrate/isopropylmalate dehydrogenase ND437_09625 PF00849 RNA pseudouridylate synthase ND437_09630 PF00293 NUDIX domain ND437_09640 PF04356 Protein of unknown function (DUF489) ND437_09645 PF00206 Lyase ND437_09645 PF08328 Adenylosuccinate lyase C-terminal ND437_09655 PF00486 Transcriptional regulatory protein, C terminal ND437_09655 PF00072 Response regulator receiver domain ND437_09660 PF08918 PhoQ Sensor ND437_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_09665 PF08007 Cupin superfamily protein ND437_09670 PF01546 Peptidase family M20/M25/M40 ND437_09670 PF07687 Peptidase dimerisation domain ND437_09675 PF02146 Sir2 family ND437_09680 PF00480 ROK family ND437_09685 PF12704 MacB-like periplasmic core domain ND437_09685 PF02687 FtsX-like permease family ND437_09690 PF00005 ABC transporter ND437_09695 PF02687 FtsX-like permease family ND437_09695 PF12704 MacB-like periplasmic core domain ND437_09700 PF00271 Helicase conserved C-terminal domain ND437_09700 PF00270 DEAD/DEAH box helicase ND437_09700 PF02559 CarD-like/TRCF domain ND437_09700 PF03461 TRCF domain ND437_09700 PF17757 UvrB interaction domain ND437_09705 PF05433 Glycine zipper 2TM domain ND437_09710 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_09715 PF05728 Uncharacterised protein family (UPF0227) ND437_09720 PF00933 Glycosyl hydrolase family 3 N terminal domain ND437_09725 PF01636 Phosphotransferase enzyme family ND437_09730 PF13036 Peptidoglycan-synthase activator LpoB ND437_09730 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND437_09735 PF07233 Protein of unknown function (DUF1425) ND437_09740 PF01230 HIT domain ND437_09745 PF00367 phosphotransferase system, EIIB ND437_09745 PF02378 Phosphotransferase system, EIIC ND437_09750 PF01026 TatD related DNase ND437_09755 PF09115 DNA polymerase III, delta subunit, C terminal ND437_09760 PF02223 Thymidylate kinase ND437_09765 PF02618 YceG-like family ND437_09770 PF01063 Amino-transferase class IV ND437_09775 PF00109 Beta-ketoacyl synthase, N-terminal domain ND437_09775 PF02801 Beta-ketoacyl synthase, C-terminal domain ND437_09780 PF00550 Phosphopantetheine attachment site ND437_09790 PF00698 Acyl transferase domain ND437_09795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND437_09795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND437_09800 PF02504 Fatty acid synthesis protein ND437_09805 PF01783 Ribosomal L32p protein family ND437_09810 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND437_09815 PF02545 Maf-like protein ND437_09820 PF00849 RNA pseudouridylate synthase ND437_09820 PF01479 S4 domain ND437_09825 PF12111 Polyribonucleotide phosphorylase C terminal ND437_09825 PF10150 Ribonuclease E/G family ND437_09825 PF00575 S1 RNA binding domain ND437_09835 PF03992 Antibiotic biosynthesis monooxygenase ND437_09840 PF01979 Amidohydrolase family ND437_09845 PF06183 DinI-like family ND437_09850 PF13991 BssS protein family ND437_09855 PF01266 FAD dependent oxidoreductase ND437_09860 PF00196 Bacterial regulatory proteins, luxR family ND437_09865 PF01594 AI-2E family transporter ND437_09870 PF00581 Rhodanese-like domain ND437_09870 PF17773 UPF0176 acylphosphatase like domain ND437_09870 PF12368 Rhodanase C-terminal ND437_09875 PF03279 Bacterial lipid A biosynthesis acyltransferase ND437_09890 PF00854 POT family ND437_09900 PF00535 Glycosyl transferase family 2 ND437_09905 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND437_09910 PF01757 Acyltransferase family ND437_09920 PF03471 Transporter associated domain ND437_09920 PF00999 Sodium/hydrogen exchanger family ND437_09920 PF02080 TrkA-C domain ND437_09925 PF00484 Carbonic anhydrase ND437_09935 PF04358 DsrC like protein ND437_09940 PF00708 Acylphosphatase ND437_09945 PF10672 S-adenosylmethionine-dependent methyltransferase ND437_09945 PF17785 PUA-like domain ND437_09950 PF08755 Hemimethylated DNA-binding protein YccV like ND437_09955 PF13380 CoA binding domain ND437_09960 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND437_09965 PF02142 MGS-like domain ND437_09970 PF12462 DNA helicase IV / RNA helicase N terminal ND437_09970 PF00580 UvrD/REP helicase N-terminal domain ND437_09970 PF13361 UvrD-like helicase C-terminal domain ND437_09975 PF03733 Inner membrane component domain ND437_09980 PF12805 FUSC-like inner membrane protein yccS ND437_09985 PF04993 TfoX N-terminal domain ND437_09985 PF04994 TfoX C-terminal domain ND437_09990 PF03846 Cell division inhibitor SulA ND437_09995 PF01389 OmpA-like transmembrane domain ND437_09995 PF00691 OmpA family ND437_10000 PF06303 MatP N-terminal domain ND437_10000 PF17414 MatP C-terminal ribbon-helix-helix domain ND437_10005 PF13654 AAA domain ND437_10005 PF05362 Lon protease (S16) C-terminal proteolytic domain ND437_10010 PF07977 FabA-like domain ND437_10015 PF04957 Ribosome modulation factor ND437_10020 PF03886 ABC-type transport auxiliary lipoprotein component ND437_10025 PF02470 MlaD protein ND437_10030 PF04403 Paraquat-inducible protein A ND437_10035 PF00005 ABC transporter ND437_10035 PF16326 ABC transporter C-terminal domain ND437_10035 PF12848 ABC transporter ND437_10040 PF10672 S-adenosylmethionine-dependent methyltransferase ND437_10040 PF01170 Putative RNA methylase family UPF0020 ND437_10040 PF02926 THUMP domain ND437_10045 PF00111 2Fe-2S iron-sulfur cluster binding domain ND437_10045 PF03473 MOSC domain ND437_10045 PF03476 MOSC N-terminal beta barrel domain ND437_10050 PF07126 Cell-division protein ZapC ND437_10055 PF01180 Dihydroorotate dehydrogenase ND437_10060 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND437_10060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND437_10060 PF01433 Peptidase family M1 domain ND437_10065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND437_10065 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND437_10070 PF01336 OB-fold nucleic acid binding domain ND437_10070 PF00152 tRNA synthetases class II (D, K and N) ND437_10075 PF00267 Gram-negative porin ND437_10080 PF00155 Aminotransferase class I and II ND437_10085 PF00753 Metallo-beta-lactamase superfamily ND437_10090 PF05951 Bacterial protein of unknown function (DUF882) ND437_10095 PF01471 Putative peptidoglycan binding domain ND437_10095 PF03734 L,D-transpeptidase catalytic domain ND437_10100 PF04310 MukB N-terminal ND437_10100 PF16330 MukB hinge domain ND437_10105 PF04288 MukE-like family ND437_10110 PF03882 MukF winged-helix domain ND437_10110 PF17192 MukF middle domain ND437_10110 PF17193 MukF C-terminal domain ND437_10115 PF13847 Methyltransferase domain ND437_10120 PF02698 DUF218 domain ND437_10125 PF01636 Phosphotransferase enzyme family ND437_10130 PF02348 Cytidylyltransferase ND437_10135 PF03966 Trm112p-like protein ND437_10140 PF00313 'Cold-shock' DNA-binding domain ND437_10145 PF00313 'Cold-shock' DNA-binding domain ND437_10150 PF07063 Domain of unknown function (DUF1338) ND437_10155 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND437_10160 PF00664 ABC transporter transmembrane region ND437_10160 PF00005 ABC transporter ND437_10165 PF00753 Metallo-beta-lactamase superfamily ND437_10165 PF03772 Competence protein ND437_10170 PF00216 Bacterial DNA-binding protein ND437_10175 PF00575 S1 RNA binding domain ND437_10180 PF02224 Cytidylate kinase ND437_10185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND437_10190 PF00266 Aminotransferase class-V ND437_10195 PF17763 Glutaminase/Asparaginase C-terminal domain ND437_10195 PF00710 Asparaginase, N-terminal ND437_10200 PF18381 YcaO cyclodehydratase C-terminal domain ND437_10200 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND437_10205 PF01226 Formate/nitrite transporter ND437_10210 PF01228 Glycine radical ND437_10210 PF02901 Pyruvate formate lyase-like ND437_10215 PF04055 Radical SAM superfamily ND437_10220 PF07690 Major Facilitator Superfamily ND437_10225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND437_10225 PF02403 Seryl-tRNA synthetase N-terminal domain ND437_10230 PF00004 ATPase family associated with various cellular activities (AAA) ND437_10230 PF16193 AAA C-terminal domain ND437_10230 PF12002 MgsA AAA+ ATPase C terminal ND437_10235 PF03548 Outer membrane lipoprotein carrier protein LolA ND437_10240 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND437_10240 PF17854 FtsK alpha domain ND437_10240 PF09397 Ftsk gamma domain ND437_10240 PF01580 FtsK/SpoIIIE family ND437_10245 PF01037 Lrp/AsnC ligand binding domain ND437_10250 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_10255 PF00005 ABC transporter ND437_10255 PF00664 ABC transporter transmembrane region ND437_10260 PF00005 ABC transporter ND437_10260 PF00664 ABC transporter transmembrane region ND437_10265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND437_10270 PF01176 Translation initiation factor 1A / IF-1 ND437_10275 PF00004 ATPase family associated with various cellular activities (AAA) ND437_10275 PF10431 C-terminal, D2-small domain, of ClpB protein ND437_10275 PF07724 AAA domain (Cdc48 subfamily) ND437_10275 PF02861 Clp amino terminal domain, pathogenicity island component ND437_10275 PF17871 AAA lid domain ND437_10280 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND437_10285 PF00313 'Cold-shock' DNA-binding domain ND437_10290 PF00005 ABC transporter ND437_10290 PF02687 FtsX-like permease family ND437_10290 PF12704 MacB-like periplasmic core domain ND437_10295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND437_10300 PF04393 Protein of unknown function (DUF535) ND437_10305 PF11398 Protein of unknown function (DUF2813) ND437_10310 PF03956 Lysine exporter LysO ND437_10315 PF03063 Prismane/CO dehydrogenase family ND437_10320 PF00970 Oxidoreductase FAD-binding domain ND437_10320 PF00111 2Fe-2S iron-sulfur cluster binding domain ND437_10320 PF00175 Oxidoreductase NAD-binding domain ND437_10325 PF01212 Beta-eliminating lyase ND437_10330 PF11066 Protein of unknown function (DUF2867) ND437_10330 PF13460 NAD(P)H-binding ND437_10335 PF01370 NAD dependent epimerase/dehydratase family ND437_10340 PF01906 Putative heavy-metal-binding ND437_10345 PF12883 Protein of unknown function (DUF3828) ND437_10350 PF00005 ABC transporter ND437_10355 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_10360 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10365 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10370 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_10375 PF05958 tRNA (Uracil-5-)-methyltransferase ND437_10380 PF10767 Protein of unknown function (DUF2593) ND437_10385 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10390 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10395 PF00005 ABC transporter ND437_10395 PF08402 TOBE domain ND437_10400 PF13416 Bacterial extracellular solute-binding protein ND437_10405 PF10722 Putative bacterial sensory transduction regulator ND437_10410 PF07214 Protein of unknown function (DUF1418) ND437_10415 PF00462 Glutaredoxin ND437_10420 PF06826 Predicted Permease Membrane Region ND437_10420 PF02080 TrkA-C domain ND437_10430 PF01569 PAP2 superfamily ND437_10435 PF01791 DeoC/LacD family aldolase ND437_10440 PF00455 DeoR C terminal sensor domain ND437_10440 PF08220 DeoR-like helix-turn-helix domain ND437_10450 PF03313 Serine dehydratase alpha chain ND437_10450 PF03315 Serine dehydratase beta chain ND437_10455 PF07943 Penicillin-binding protein 5, C-terminal domain ND437_10455 PF00768 D-alanyl-D-alanine carboxypeptidase ND437_10460 PF00571 CBS domain ND437_10460 PF00291 Pyridoxal-phosphate dependent enzyme ND437_10465 PF01053 Cys/Met metabolism PLP-dependent enzyme ND437_10480 PF00043 Glutathione S-transferase, C-terminal domain ND437_10480 PF13417 Glutathione S-transferase, N-terminal domain ND437_10485 PF01370 NAD dependent epimerase/dehydratase family ND437_10495 PF08029 HisG, C-terminal domain ND437_10495 PF01634 ATP phosphoribosyltransferase ND437_10500 PF00815 Histidinol dehydrogenase ND437_10505 PF00155 Aminotransferase class I and II ND437_10510 PF00475 Imidazoleglycerol-phosphate dehydratase ND437_10515 PF00117 Glutamine amidotransferase class-I ND437_10520 PF00977 Histidine biosynthesis protein ND437_10525 PF00977 Histidine biosynthesis protein ND437_10530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND437_10530 PF01502 Phosphoribosyl-AMP cyclohydrolase ND437_10540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND437_10540 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND437_10545 PF00483 Nucleotidyl transferase ND437_10550 PF00483 Nucleotidyl transferase ND437_10555 PF03741 Integral membrane protein TerC family ND437_10555 PF03471 Transporter associated domain ND437_10555 PF00571 CBS domain ND437_10560 PF03606 C4-dicarboxylate anaerobic carrier ND437_10565 PF05170 AsmA family ND437_10570 PF00692 dUTPase ND437_10575 PF00485 Phosphoribulokinase / Uridine kinase family ND437_10580 PF10609 NUBPL iron-transfer P-loop NTPase ND437_10585 PF09334 tRNA synthetases class I (M) ND437_10585 PF01588 Putative tRNA binding domain ND437_10595 PF03788 LrgA family ND437_10600 PF04172 LrgB-like family ND437_10605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND437_10605 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND437_10610 PF03466 LysR substrate binding domain ND437_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_10620 PF00390 Malic enzyme, N-terminal domain ND437_10620 PF03949 Malic enzyme, NAD binding domain ND437_10625 PF02698 DUF218 domain ND437_10630 PF02653 Branched-chain amino acid transport system / permease component ND437_10635 PF00005 ABC transporter ND437_10640 PF13407 Periplasmic binding protein domain ND437_10645 PF00356 Bacterial regulatory proteins, lacI family ND437_10650 PF04235 Protein of unknown function (DUF418) ND437_10655 PF01227 GTP cyclohydrolase I ND437_10660 PF06779 Uncharacterised MFS-type transporter YbfB ND437_10665 PF03466 LysR substrate binding domain ND437_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_10670 PF08240 Alcohol dehydrogenase GroES-like domain ND437_10670 PF00107 Zinc-binding dehydrogenase ND437_10675 PF00756 Putative esterase ND437_10685 PF00994 Probable molybdopterin binding domain ND437_10685 PF03454 MoeA C-terminal region (domain IV) ND437_10685 PF03453 MoeA N-terminal region (domain I and II) ND437_10690 PF00899 ThiF family ND437_10695 PF00005 ABC transporter ND437_10695 PF12848 ABC transporter ND437_10700 PF01545 Cation efflux family ND437_10700 PF16916 Dimerisation domain of Zinc Transporter ND437_10705 PF00571 CBS domain ND437_10705 PF01769 Divalent cation transporter ND437_10705 PF03448 MgtE intracellular N domain ND437_10710 PF13505 Outer membrane protein beta-barrel domain ND437_10715 PF00892 EamA-like transporter family ND437_10720 PF13649 Methyltransferase domain ND437_10725 PF00210 Ferritin-like domain ND437_10730 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_10735 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10740 PF00005 ABC transporter ND437_10745 PF05971 RNA methyltransferase ND437_10750 PF02885 Glycosyl transferase family, helical bundle domain ND437_10755 PF06733 DEAD_2 ND437_10755 PF13307 Helicase C-terminal domain ND437_10760 PF00267 Gram-negative porin ND437_10765 PF00892 EamA-like transporter family ND437_10775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND437_10775 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND437_10775 PF01276 Orn/Lys/Arg decarboxylase, major domain ND437_10780 PF13520 Amino acid permease ND437_10785 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10790 PF00005 ABC transporter ND437_10795 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND437_10805 PF00581 Rhodanese-like domain ND437_10810 PF07308 Protein of unknown function (DUF1456) ND437_10815 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10820 PF00528 Binding-protein-dependent transport system inner membrane component ND437_10830 PF00005 ABC transporter ND437_10835 PF04226 Transglycosylase associated protein ND437_10845 PF01844 HNH endonuclease ND437_10850 PF01928 CYTH domain ND437_10855 PF01565 FAD binding domain ND437_10855 PF09330 D-lactate dehydrogenase, membrane binding ND437_10860 PF00768 D-alanyl-D-alanine carboxypeptidase ND437_10870 PF01207 Dihydrouridine synthase (Dus) ND437_10875 PF00270 DEAD/DEAH box helicase ND437_10875 PF00271 Helicase conserved C-terminal domain ND437_10880 PF09209 Tetracyclin repressor-like, C-terminal domain ND437_10880 PF00440 Bacterial regulatory proteins, tetR family ND437_10885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND437_10890 PF00005 ABC transporter ND437_10905 PF01027 Inhibitor of apoptosis-promoting Bax1 ND437_10910 PF02391 MoaE protein ND437_10915 PF02597 ThiS family ND437_10920 PF01967 MoaC family ND437_10925 PF06463 Molybdenum Cofactor Synthesis C ND437_10925 PF04055 Radical SAM superfamily ND437_10930 PF01933 Uncharacterised protein family UPF0052 ND437_10935 PF00005 ABC transporter ND437_10940 PF01032 FecCD transport family ND437_10955 PF09905 DNA-binding protein VF530 ND437_10960 PF00271 Helicase conserved C-terminal domain ND437_10960 PF04851 Type III restriction enzyme, res subunit ND437_10960 PF02151 UvrB/uvrC motif ND437_10960 PF12344 Ultra-violet resistance protein B ND437_10960 PF17757 UvrB interaction domain ND437_10965 PF00005 ABC transporter ND437_10975 PF08241 Methyltransferase domain ND437_10980 PF00155 Aminotransferase class I and II ND437_10985 PF06968 Biotin and Thiamin Synthesis associated domain ND437_10985 PF04055 Radical SAM superfamily ND437_10990 PF00202 Aminotransferase class-III ND437_10995 PF10282 Lactonase, 7-bladed beta-propeller ND437_11005 PF00005 ABC transporter ND437_11005 PF03459 TOBE domain ND437_11010 PF00528 Binding-protein-dependent transport system inner membrane component ND437_11020 PF10766 Multidrug efflux pump-associated protein AcrZ ND437_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_11025 PF03459 TOBE domain ND437_11040 PF16363 GDP-mannose 4,6 dehydratase ND437_11045 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND437_11045 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND437_11050 PF08544 GHMP kinases C terminal ND437_11050 PF00288 GHMP kinases N terminal domain ND437_11050 PF10509 Galactokinase galactose-binding signature ND437_11055 PF01263 Aldose 1-epimerase ND437_11065 PF00300 Histidine phosphatase superfamily (branch 1) ND437_11070 PF00793 DAHP synthetase I family ND437_11075 PF00072 Response regulator receiver domain ND437_11075 PF00196 Bacterial regulatory proteins, luxR family ND437_11080 PF00512 His Kinase A (phospho-acceptor) domain ND437_11080 PF01627 Hpt domain ND437_11080 PF00989 PAS fold ND437_11080 PF00072 Response regulator receiver domain ND437_11080 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_11085 PF04973 Nicotinamide mononucleotide transporter ND437_11090 PF02445 Quinolinate synthetase A protein ND437_11115 PF16331 TolA binding protein trimerisation ND437_11115 PF13174 Tetratricopeptide repeat ND437_11120 PF00691 OmpA family ND437_11125 PF04052 TolB amino-terminal domain ND437_11125 PF07676 WD40-like Beta Propeller Repeat ND437_11130 PF06519 TolA C-terminal ND437_11130 PF06519 TolA C-terminal ND437_11135 PF02472 Biopolymer transport protein ExbD/TolR ND437_11140 PF01618 MotA/TolQ/ExbB proton channel family ND437_11145 PF03061 Thioesterase superfamily ND437_11150 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND437_11155 PF08173 Membrane bound YbgT-like protein ND437_11160 PF02322 Cytochrome bd terminal oxidase subunit II ND437_11165 PF01654 Cytochrome bd terminal oxidase subunit I ND437_11170 PF02872 5'-nucleotidase, C-terminal domain ND437_11170 PF00149 Calcineurin-like phosphoesterase ND437_11175 PF00549 CoA-ligase ND437_11175 PF02629 CoA binding domain ND437_11180 PF08442 ATP-grasp domain ND437_11180 PF00549 CoA-ligase ND437_11185 PF02817 e3 binding domain ND437_11185 PF00364 Biotin-requiring enzyme ND437_11185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND437_11190 PF16078 2-oxoglutarate dehydrogenase N-terminus ND437_11190 PF02779 Transketolase, pyrimidine binding domain ND437_11190 PF16870 2-oxoglutarate dehydrogenase C-terminal ND437_11190 PF00676 Dehydrogenase E1 component ND437_11195 PF13085 2Fe-2S iron-sulfur cluster binding domain ND437_11200 PF02910 Fumarate reductase flavoprotein C-term ND437_11200 PF00890 FAD binding domain ND437_11205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND437_11210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND437_11215 PF00285 Citrate synthase, C-terminal domain ND437_11225 PF01470 Pyroglutamyl peptidase ND437_11240 PF03746 LamB/YcsF family ND437_11245 PF02626 Carboxyltransferase domain, subdomain A and B ND437_11250 PF02682 Carboxyltransferase domain, subdomain C and D ND437_11255 PF01784 NIF3 (NGG1p interacting factor 3) ND437_11260 PF02112 cAMP phosphodiesterases class-II ND437_11265 PF00875 DNA photolyase ND437_11265 PF03441 FAD binding domain of DNA photolyase ND437_11270 PF08349 Protein of unknown function (DUF1722) ND437_11275 PF10725 Protein of unknown function (DUF2517) ND437_11280 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND437_11285 PF03814 Potassium-transporting ATPase A subunit ND437_11295 PF02669 K+-transporting ATPase, c chain ND437_11300 PF02702 Osmosensitive K+ channel His kinase sensor domain ND437_11300 PF13492 GAF domain ND437_11300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_11300 PF00512 His Kinase A (phospho-acceptor) domain ND437_11300 PF13493 Domain of unknown function (DUF4118) ND437_11305 PF00072 Response regulator receiver domain ND437_11305 PF00486 Transcriptional regulatory protein, C terminal ND437_11315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND437_11315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND437_11315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND437_11315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND437_11320 PF03925 SeqA protein C-terminal domain ND437_11320 PF17206 SeqA protein N-terminal domain ND437_11325 PF12697 Alpha/beta hydrolase family ND437_11330 PF01402 Ribbon-helix-helix protein, copG family ND437_11335 PF00672 HAMP domain ND437_11335 PF02203 Tar ligand binding domain homologue ND437_11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_11340 PF00258 Flavodoxin ND437_11345 PF01475 Ferric uptake regulator family ND437_11350 PF02838 Glycosyl hydrolase family 20, domain 2 ND437_11350 PF00728 Glycosyl hydrolase family 20, catalytic domain ND437_11350 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ND437_11350 PF03173 Putative carbohydrate binding domain ND437_11355 PF13982 YbfN-like lipoprotein ND437_11360 PF03573 outer membrane porin, OprD family ND437_11365 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND437_11365 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND437_11370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND437_11370 PF02378 Phosphotransferase system, EIIC ND437_11370 PF00367 phosphotransferase system, EIIB ND437_11375 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND437_11380 PF01979 Amidohydrolase family ND437_11385 PF01047 MarR family ND437_11385 PF00480 ROK family ND437_11390 PF13344 Haloacid dehalogenase-like hydrolase ND437_11395 PF00733 Asparagine synthase ND437_11395 PF13537 Glutamine amidotransferase domain ND437_11430 PF01494 FAD binding domain ND437_11435 PF00919 Uncharacterized protein family UPF0004 ND437_11435 PF01938 TRAM domain ND437_11435 PF04055 Radical SAM superfamily ND437_11440 PF02562 PhoH-like protein ND437_11445 PF02130 Uncharacterized protein family UPF0054 ND437_11450 PF03471 Transporter associated domain ND437_11450 PF00571 CBS domain ND437_11455 PF00795 Carbon-nitrogen hydrolase ND437_11460 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_11465 PF00528 Binding-protein-dependent transport system inner membrane component ND437_11470 PF00528 Binding-protein-dependent transport system inner membrane component ND437_11475 PF00005 ABC transporter ND437_11480 PF07295 Zinc-ribbon containing domain ND437_11485 PF08264 Anticodon-binding domain of tRNA ND437_11485 PF00133 tRNA synthetases class I (I, L, M and V) ND437_11485 PF13603 Leucyl-tRNA synthetase, Domain 2 ND437_11490 PF04390 Lipopolysaccharide-assembly ND437_11495 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND437_11495 PF06144 DNA polymerase III, delta subunit ND437_11500 PF01467 Cytidylyltransferase-like ND437_11510 PF02590 Predicted SPOUT methyltransferase ND437_11515 PF00905 Penicillin binding protein transpeptidase domain ND437_11515 PF03717 Penicillin-binding Protein dimerisation domain ND437_11520 PF01098 Cell cycle protein ND437_11525 PF03330 Lytic transglycolase ND437_11525 PF05036 Sporulation related domain ND437_11530 PF00768 D-alanyl-D-alanine carboxypeptidase ND437_11530 PF07943 Penicillin-binding protein 5, C-terminal domain ND437_11535 PF04359 Protein of unknown function (DUF493) ND437_11540 PF03099 Biotin/lipoate A/B protein ligase family ND437_11545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND437_11545 PF04055 Radical SAM superfamily ND437_11550 PF02416 mttA/Hcf106 family ND437_11555 PF00990 Diguanylate cyclase, GGDEF domain ND437_11555 PF05230 MASE2 domain ND437_11565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND437_11570 PF00313 'Cold-shock' DNA-binding domain ND437_11575 PF00313 'Cold-shock' DNA-binding domain ND437_11580 PF00196 Bacterial regulatory proteins, luxR family ND437_11615 PF00440 Bacterial regulatory proteins, tetR family ND437_11620 PF00990 Diguanylate cyclase, GGDEF domain ND437_11620 PF00072 Response regulator receiver domain ND437_11625 PF00672 HAMP domain ND437_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_11625 PF00512 His Kinase A (phospho-acceptor) domain ND437_11625 PF01627 Hpt domain ND437_11625 PF00072 Response regulator receiver domain ND437_11625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND437_11630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND437_11630 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND437_11630 PF16355 Domain of unknown function (DUF4982) ND437_11630 PF00703 Glycosyl hydrolases family 2 ND437_11650 PF07238 PilZ domain ND437_11650 PF03552 Cellulose synthase ND437_11650 PF00535 Glycosyl transferase family 2 ND437_11660 PF00483 Nucleotidyl transferase ND437_11670 PF00072 Response regulator receiver domain ND437_11670 PF00486 Transcriptional regulatory protein, C terminal ND437_11680 PF00343 Carbohydrate phosphorylase ND437_11690 PF01292 Prokaryotic cytochrome b561 ND437_11715 PF00501 AMP-binding enzyme ND437_11725 PF03960 ArsC family ND437_11730 PF02040 Arsenical pump membrane protein ND437_11735 PF01022 Bacterial regulatory protein, arsR family ND437_11790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND437_11790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND437_11825 PF02753 Pili assembly chaperone PapD, C-terminal domain ND437_11825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_11830 PF00577 Outer membrane usher protein ND437_11830 PF13954 PapC N-terminal domain ND437_11830 PF13953 PapC C-terminal domain ND437_11835 PF00419 Fimbrial protein ND437_11850 PF01406 tRNA synthetases class I (C) catalytic domain ND437_11850 PF09190 DALR domain ND437_11855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND437_11860 PF00149 Calcineurin-like phosphoesterase ND437_11865 PF00731 AIR carboxylase ND437_11870 PF02222 ATP-grasp domain ND437_11870 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND437_11880 PF00005 ABC transporter ND437_11885 PF13472 GDSL-like Lipase/Acylhydrolase family ND437_11890 PF00106 short chain dehydrogenase ND437_11895 PF00085 Thioredoxin ND437_11900 PF01145 SPFH domain / Band 7 family ND437_11900 PF16200 C-terminal region of band_7 ND437_11905 PF01957 NfeD-like C-terminal, partner-binding ND437_11910 PF13411 MerR HTH family regulatory protein ND437_11915 PF00403 Heavy-metal-associated domain ND437_11920 PF01963 TraB family ND437_11925 PF04073 Aminoacyl-tRNA editing domain ND437_11935 PF08485 Polysaccharide biosynthesis protein C-terminal ND437_11935 PF02719 Polysaccharide biosynthesis protein ND437_11945 PF02350 UDP-N-acetylglucosamine 2-epimerase ND437_11965 PF08242 Methyltransferase domain ND437_11980 PF02872 5'-nucleotidase, C-terminal domain ND437_11980 PF00149 Calcineurin-like phosphoesterase ND437_11985 PF02254 TrkA-N domain ND437_11985 PF00999 Sodium/hydrogen exchanger family ND437_11990 PF00294 pfkB family carbohydrate kinase ND437_11995 PF02706 Chain length determinant protein ND437_12000 PF00762 Ferrochelatase ND437_12005 PF05191 Adenylate kinase, active site lid ND437_12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_12010 PF00183 Hsp90 protein ND437_12015 PF02132 RecR protein ND437_12015 PF13662 Toprim domain ND437_12020 PF02575 YbaB/EbfC DNA-binding family ND437_12025 PF12169 DNA polymerase III subunits gamma and tau domain III ND437_12025 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND437_12025 PF12170 DNA polymerase III tau subunit V interacting with alpha ND437_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_12030 PF00512 His Kinase A (phospho-acceptor) domain ND437_12035 PF00072 Response regulator receiver domain ND437_12035 PF00486 Transcriptional regulatory protein, C terminal ND437_12050 PF01970 Tripartite tricarboxylate transporter TctA family ND437_12055 PF00156 Phosphoribosyl transferase domain ND437_12060 PF04304 Protein of unknown function (DUF454) ND437_12070 PF10689 Protein of unknown function (DUF2496) ND437_12075 PF00924 Mechanosensitive ion channel ND437_12075 PF12795 Mechanosensitive ion channel porin domain ND437_12075 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND437_12080 PF02635 DsrE/DsrF-like family ND437_12085 PF08361 MAATS-type transcriptional repressor, C-terminal region ND437_12085 PF00440 Bacterial regulatory proteins, tetR family ND437_12090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND437_12090 PF00529 HlyD membrane-fusion protein of T1SS ND437_12095 PF00873 AcrB/AcrD/AcrF family ND437_12100 PF01197 Ribosomal protein L31 ND437_12105 PF00444 Ribosomal protein L36 ND437_12115 PF10757 Biofilm formation regulator YbaJ ND437_12120 PF05321 Haemolysin expression modulating protein ND437_12130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND437_12140 PF00909 Ammonium Transporter Family ND437_12145 PF00543 Nitrogen regulatory protein P-II ND437_12150 PF00664 ABC transporter transmembrane region ND437_12150 PF00005 ABC transporter ND437_12155 PF00664 ABC transporter transmembrane region ND437_12155 PF00005 ABC transporter ND437_12160 PF01037 Lrp/AsnC ligand binding domain ND437_12160 PF13404 AsnC-type helix-turn-helix domain ND437_12175 PF12793 Sugar transport-related sRNA regulator N-term ND437_12175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_12180 PF06508 Queuosine biosynthesis protein QueC ND437_12195 PF13145 PPIC-type PPIASE domain ND437_12200 PF00216 Bacterial DNA-binding protein ND437_12205 PF00004 ATPase family associated with various cellular activities (AAA) ND437_12205 PF05362 Lon protease (S16) C-terminal proteolytic domain ND437_12205 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND437_12210 PF07724 AAA domain (Cdc48 subfamily) ND437_12210 PF10431 C-terminal, D2-small domain, of ClpB protein ND437_12210 PF06689 ClpX C4-type zinc finger ND437_12215 PF00574 Clp protease ND437_12220 PF05697 Bacterial trigger factor protein (TF) ND437_12220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND437_12220 PF05698 Bacterial trigger factor protein (TF) C-terminus ND437_12225 PF01722 BolA-like protein ND437_12230 PF03923 Uncharacterized lipoprotein ND437_12230 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND437_12235 PF07690 Major Facilitator Superfamily ND437_12240 PF03502 Nucleoside-specific channel-forming protein, Tsx ND437_12245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND437_12245 PF06481 COX Aromatic Rich Motif ND437_12250 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND437_12255 PF00510 Cytochrome c oxidase subunit III ND437_12260 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND437_12265 PF01040 UbiA prenyltransferase family ND437_12270 PF07690 Major Facilitator Superfamily ND437_12275 PF04461 Protein of unknown function (DUF520) ND437_12280 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND437_12280 PF02558 Ketopantoate reductase PanE/ApbA ND437_12285 PF01965 DJ-1/PfpI family ND437_12290 PF07690 Major Facilitator Superfamily ND437_12300 PF00512 His Kinase A (phospho-acceptor) domain ND437_12300 PF00672 HAMP domain ND437_12300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_12305 PF02954 Bacterial regulatory protein, Fis family ND437_12305 PF00072 Response regulator receiver domain ND437_12305 PF14532 Sigma-54 interaction domain ND437_12310 PF02568 Thiamine biosynthesis protein (ThiI) ND437_12310 PF02926 THUMP domain ND437_12315 PF02609 Exonuclease VII small subunit ND437_12320 PF00348 Polyprenyl synthetase ND437_12325 PF02780 Transketolase, C-terminal domain ND437_12325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND437_12325 PF02779 Transketolase, pyrimidine binding domain ND437_12330 PF04608 Phosphatidylglycerophosphatase A ND437_12335 PF00586 AIR synthase related protein, N-terminal domain ND437_12335 PF02769 AIR synthase related protein, C-terminal domain ND437_12340 PF01029 NusB family ND437_12345 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND437_12350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND437_12350 PF01872 RibD C-terminal domain ND437_12355 PF03477 ATP cone domain ND437_12360 PF07549 SecD/SecF GG Motif ND437_12360 PF02355 Protein export membrane protein ND437_12365 PF07549 SecD/SecF GG Motif ND437_12365 PF02355 Protein export membrane protein ND437_12365 PF13721 SecD export protein N-terminal TM region ND437_12370 PF02699 Preprotein translocase subunit ND437_12375 PF01702 Queuine tRNA-ribosyltransferase ND437_12380 PF02547 Queuosine biosynthesis protein ND437_12385 PF04336 Acyl carrier protein phosphodiesterase ND437_12390 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND437_12390 PF00578 AhpC/TSA family ND437_12400 PF00128 Alpha amylase, catalytic domain ND437_12400 PF02903 Alpha amylase, N-terminal ig-like domain ND437_12405 PF00324 Amino acid permease ND437_12410 PF05525 Branched-chain amino acid transport protein ND437_12415 PF12849 PBP superfamily domain ND437_12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_12420 PF00512 His Kinase A (phospho-acceptor) domain ND437_12420 PF00989 PAS fold ND437_12420 PF11808 Phosphate regulon sensor protein PhoR ND437_12425 PF00072 Response regulator receiver domain ND437_12425 PF00486 Transcriptional regulatory protein, C terminal ND437_12430 PF00149 Calcineurin-like phosphoesterase ND437_12430 PF12320 Type 5 capsule protein repressor C-terminal domain ND437_12435 PF13476 AAA domain ND437_12440 PF00480 ROK family ND437_12445 PF04381 Putative exonuclease, RdgC ND437_12450 PF06865 Pyrimidine/purine nucleoside phosphorylase ND437_12455 PF07302 AroM protein ND437_12475 PF01202 Shikimate kinase ND437_12480 PF00593 TonB dependent receptor ND437_12480 PF07715 TonB-dependent Receptor Plug Domain ND437_12485 PF01497 Periplasmic binding protein ND437_12505 PF07238 PilZ domain ND437_12505 PF07317 Flagellar regulator YcgR ND437_12510 PF00171 Aldehyde dehydrogenase family ND437_12515 PF01472 PUA domain ND437_12515 PF00696 Amino acid kinase family ND437_12520 PF07417 Sigma factor-binding transcriptional regulator Crl ND437_12525 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND437_12530 PF00156 Phosphoribosyl transferase domain ND437_12535 PF07687 Peptidase dimerisation domain ND437_12535 PF01546 Peptidase family M20/M25/M40 ND437_12540 PF00817 impB/mucB/samB family ND437_12540 PF11799 impB/mucB/samB family C-terminal domain ND437_12540 PF11798 IMS family HHH motif ND437_12545 PF03009 Glycerophosphoryl diester phosphodiesterase family ND437_12550 PF04400 (Na+)-NQR maturation NqrM ND437_12555 PF02424 ApbE family ND437_12560 PF00111 2Fe-2S iron-sulfur cluster binding domain ND437_12560 PF00970 Oxidoreductase FAD-binding domain ND437_12560 PF00175 Oxidoreductase NAD-binding domain ND437_12565 PF02508 Rnf-Nqr subunit, membrane protein ND437_12570 PF02508 Rnf-Nqr subunit, membrane protein ND437_12575 PF04205 FMN-binding domain ND437_12580 PF03116 NQR2, RnfD, RnfE family ND437_12585 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ND437_12585 PF11973 NQRA C-terminal domain ND437_12590 PF03734 L,D-transpeptidase catalytic domain ND437_12595 PF13230 Glutamine amidotransferases class-II ND437_12600 PF13580 SIS domain ND437_12605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND437_12605 PF09317 Domain of unknown function (DUF1974) ND437_12605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND437_12615 PF00929 Exonuclease ND437_12620 PF00075 RNase H ND437_12625 PF08241 Methyltransferase domain ND437_12630 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND437_12630 PF00753 Metallo-beta-lactamase superfamily ND437_12635 PF01476 LysM domain ND437_12635 PF01464 Transglycosylase SLT domain ND437_12640 PF03372 Endonuclease/Exonuclease/phosphatase family ND437_12670 PF07724 AAA domain (Cdc48 subfamily) ND437_12670 PF17871 AAA lid domain ND437_12670 PF02861 Clp amino terminal domain, pathogenicity island component ND437_12670 PF10431 C-terminal, D2-small domain, of ClpB protein ND437_12670 PF00004 ATPase family associated with various cellular activities (AAA) ND437_12675 PF02578 Multi-copper polyphenol oxidoreductase laccase ND437_12680 PF01479 S4 domain ND437_12680 PF00849 RNA pseudouridylate synthase ND437_12685 PF13525 Outer membrane lipoprotein ND437_12690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND437_12700 PF00800 Prephenate dehydratase ND437_12700 PF01817 Chorismate mutase type II ND437_12705 PF02153 Prephenate dehydrogenase ND437_12705 PF01817 Chorismate mutase type II ND437_12710 PF00793 DAHP synthetase I family ND437_12715 PF04397 LytTr DNA-binding domain ND437_12715 PF00072 Response regulator receiver domain ND437_12720 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND437_12725 PF04338 Protein of unknown function, DUF481 ND437_12730 PF01245 Ribosomal protein L19 ND437_12735 PF01746 tRNA (Guanine-1)-methyltransferase ND437_12740 PF01782 RimM N-terminal domain ND437_12740 PF05239 PRC-barrel domain ND437_12745 PF00886 Ribosomal protein S16 ND437_12750 PF00448 SRP54-type protein, GTPase domain ND437_12750 PF02978 Signal peptide binding domain ND437_12750 PF02881 SRP54-type protein, helical bundle domain ND437_12755 PF01578 Cytochrome C assembly protein ND437_12760 PF01595 Cyclin M transmembrane N-terminal domain ND437_12760 PF03471 Transporter associated domain ND437_12760 PF00571 CBS domain ND437_12765 PF02664 S-Ribosylhomocysteinase (LuxS) ND437_12770 PF04262 Glutamate-cysteine ligase ND437_12775 PF09335 SNARE associated Golgi protein ND437_12780 PF13419 Haloacid dehalogenase-like hydrolase ND437_12805 PF02599 Global regulator protein family ND437_12810 PF02272 DHHA1 domain ND437_12810 PF01411 tRNA synthetases class II (A) ND437_12810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND437_12815 PF02631 RecX family ND437_12820 PF00154 recA bacterial DNA recombination protein ND437_12825 PF02464 Competence-damaged protein ND437_12830 PF07690 Major Facilitator Superfamily ND437_12835 PF05681 Fumarate hydratase (Fumerase) ND437_12835 PF05683 Fumarase C-terminus ND437_12860 PF11356 Type II secretion system protein C ND437_12865 PF03958 Bacterial type II/III secretion system short domain ND437_12865 PF00263 Bacterial type II and III secretion system protein ND437_12870 PF00437 Type II/IV secretion system protein ND437_12875 PF00482 Type II secretion system (T2SS), protein F ND437_12880 PF08334 Type II secretion system (T2SS), protein G ND437_12880 PF07963 Prokaryotic N-terminal methylation motif ND437_12890 PF07963 Prokaryotic N-terminal methylation motif ND437_12890 PF02501 Type II secretion system (T2SS), protein I ND437_12895 PF07963 Prokaryotic N-terminal methylation motif ND437_12895 PF11612 Type II secretion system (T2SS), protein J ND437_12900 PF03934 Type II secretion system (T2SS), protein K ND437_12905 PF12693 GspL periplasmic domain ND437_12905 PF05134 Type II secretion system (T2SS), protein L ND437_12915 PF06750 Bacterial Peptidase A24 N-terminal domain ND437_12915 PF01478 Type IV leader peptidase family ND437_12920 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND437_12925 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND437_12925 PF18416 N-acetylglucosamine binding protein domain 2 ND437_12945 PF00550 Phosphopantetheine attachment site ND437_12970 PF07720 Tetratricopeptide repeat ND437_12975 PF01312 FlhB HrpN YscU SpaS Family ND437_12980 PF01311 Bacterial export proteins, family 1 ND437_12985 PF01313 Bacterial export proteins, family 3 ND437_12990 PF00813 FliP family ND437_12995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND437_13010 PF18269 T3SS EscN ATPase C-terminal domain ND437_13010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND437_13010 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND437_13020 PF00771 FHIPEP family ND437_13025 PF07201 HrpJ-like domain ND437_13030 PF03958 Bacterial type II/III secretion system short domain ND437_13030 PF00263 Bacterial type II and III secretion system protein ND437_13035 PF12833 Helix-turn-helix domain ND437_13055 PF01514 Secretory protein of YscJ/FliF family ND437_13075 PF01464 Transglycosylase SLT domain ND437_13090 PF00196 Bacterial regulatory proteins, luxR family ND437_13090 PF00072 Response regulator receiver domain ND437_13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_13095 PF00512 His Kinase A (phospho-acceptor) domain ND437_13095 PF09308 LuxQ, periplasmic ND437_13095 PF00072 Response regulator receiver domain ND437_13160 PF05190 MutS family domain IV ND437_13160 PF01624 MutS domain I ND437_13160 PF05188 MutS domain II ND437_13160 PF00488 MutS domain V ND437_13160 PF05192 MutS domain III ND437_13165 PF00140 Sigma-70 factor, region 1.2 ND437_13165 PF04542 Sigma-70 region 2 ND437_13165 PF04539 Sigma-70 region 3 ND437_13165 PF04545 Sigma-70, region 4 ND437_13170 PF01476 LysM domain ND437_13170 PF01551 Peptidase family M23 ND437_13180 PF01975 Survival protein SurE ND437_13185 PF01142 tRNA pseudouridine synthase D (TruD) ND437_13190 PF02542 YgbB family ND437_13195 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND437_13200 PF04977 Septum formation initiator ND437_13205 PF12084 Protein of unknown function (DUF3561) ND437_13215 PF00009 Elongation factor Tu GTP binding domain ND437_13220 PF01507 Phosphoadenosine phosphosulfate reductase family ND437_13225 PF10414 Sirohaem synthase dimerisation region ND437_13225 PF14824 Sirohaem biosynthesis protein central ND437_13225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND437_13230 PF04389 Peptidase family M28 ND437_13245 PF01507 Phosphoadenosine phosphosulfate reductase family ND437_13250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND437_13250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND437_13255 PF00667 FAD binding domain ND437_13255 PF00175 Oxidoreductase NAD-binding domain ND437_13255 PF00258 Flavodoxin ND437_13260 PF01242 6-pyruvoyl tetrahydropterin synthase ND437_13265 PF04055 Radical SAM superfamily ND437_13270 PF00113 Enolase, C-terminal TIM barrel domain ND437_13270 PF03952 Enolase, N-terminal domain ND437_13275 PF06418 CTP synthase N-terminus ND437_13275 PF00117 Glutamine amidotransferase class-I ND437_13280 PF03819 MazG nucleotide pyrophosphohydrolase domain ND437_13285 PF04607 Region found in RelA / SpoT proteins ND437_13285 PF02824 TGS domain ND437_13285 PF13291 ACT domain ND437_13290 PF01938 TRAM domain ND437_13290 PF05958 tRNA (Uracil-5-)-methyltransferase ND437_13295 PF00072 Response regulator receiver domain ND437_13295 PF01627 Hpt domain ND437_13295 PF00512 His Kinase A (phospho-acceptor) domain ND437_13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_13295 PF00672 HAMP domain ND437_13295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND437_13300 PF00595 PDZ domain ND437_13305 PF01966 HD domain ND437_13305 PF13286 Phosphohydrolase-associated domain ND437_13310 PF01048 Phosphorylase superfamily ND437_13315 PF01497 Periplasmic binding protein ND437_13320 PF03458 UPF0126 domain ND437_13325 PF01521 Iron-sulphur cluster biosynthesis ND437_13330 PF00654 Voltage gated chloride channel ND437_13335 PF00202 Aminotransferase class-III ND437_13340 PF14814 Bifunctional transglycosylase second domain ND437_13340 PF00905 Penicillin binding protein transpeptidase domain ND437_13340 PF00912 Transglycosylase ND437_13340 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND437_13345 PF04408 Helicase associated domain (HA2) ND437_13345 PF00270 DEAD/DEAH box helicase ND437_13345 PF00271 Helicase conserved C-terminal domain ND437_13345 PF08482 ATP-dependent helicase C-terminal ND437_13350 PF02834 LigT like Phosphoesterase ND437_13355 PF17746 SfsA N-terminal OB domain ND437_13355 PF03749 Sugar fermentation stimulation protein RE domain ND437_13360 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND437_13365 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND437_13370 PF01743 Poly A polymerase head domain ND437_13370 PF12627 Probable RNA and SrmB- binding site of polymerase A ND437_13370 PF12626 Polymerase A arginine-rich C-terminus ND437_13375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND437_13380 PF02548 Ketopantoate hydroxymethyltransferase ND437_13385 PF02569 Pantoate-beta-alanine ligase ND437_13390 PF02261 Aspartate decarboxylase ND437_13395 PF01522 Polysaccharide deacetylase ND437_13400 PF01061 ABC-2 type transporter ND437_13405 PF00005 ABC transporter ND437_13410 PF00484 Carbonic anhydrase ND437_13415 PF00156 Phosphoribosyl transferase domain ND437_13420 PF07731 Multicopper oxidase ND437_13420 PF07732 Multicopper oxidase ND437_13420 PF10518 TAT (twin-arginine translocation) pathway signal sequence ND437_13420 PF00394 Multicopper oxidase ND437_13425 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND437_13430 PF17284 Spermidine synthase tetramerisation domain ND437_13435 PF02675 S-adenosylmethionine decarboxylase ND437_13440 PF00892 EamA-like transporter family ND437_13445 PF06062 Uncharacterised protein family (UPF0231) ND437_13450 PF00330 Aconitase family (aconitate hydratase) ND437_13450 PF11791 Aconitate B N-terminal domain ND437_13450 PF06434 Aconitate hydratase 2 N-terminus ND437_13460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_13460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND437_13465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND437_13465 PF00364 Biotin-requiring enzyme ND437_13465 PF02817 e3 binding domain ND437_13470 PF17831 Pyruvate dehydrogenase E1 component middle domain ND437_13470 PF00456 Transketolase, thiamine diphosphate binding domain ND437_13475 PF00392 Bacterial regulatory proteins, gntR family ND437_13475 PF07729 FCD domain ND437_13480 PF00324 Amino acid permease ND437_13485 PF17113 Regulatory signalling modulator protein AmpE ND437_13490 PF01510 N-acetylmuramoyl-L-alanine amidase ND437_13495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND437_13495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND437_13500 PF07963 Prokaryotic N-terminal methylation motif ND437_13505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND437_13505 PF00437 Type II/IV secretion system protein ND437_13510 PF00482 Type II secretion system (T2SS), protein F ND437_13515 PF00478 IMP dehydrogenase / GMP reductase domain ND437_13520 PF01121 Dephospho-CoA kinase ND437_13525 PF07072 Cell division protein ND437_13530 PF03884 DNA gyrase inhibitor YacG ND437_13535 PF00293 NUDIX domain ND437_13540 PF02810 SEC-C motif ND437_13540 PF07517 SecA DEAD-like domain ND437_13540 PF01043 SecA preprotein cross-linking domain ND437_13540 PF07516 SecA Wing and Scaffold domain ND437_13545 PF06558 Secretion monitor precursor protein (SecM) ND437_13555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND437_13560 PF12327 FtsZ family, C-terminal domain ND437_13560 PF00091 Tubulin/FtsZ family, GTPase domain ND437_13565 PF02491 SHS2 domain inserted in FTSA ND437_13570 PF03799 Cell division protein FtsQ ND437_13570 PF08478 POTRA domain, FtsQ-type ND437_13575 PF07478 D-ala D-ala ligase C-terminus ND437_13575 PF01820 D-ala D-ala ligase N-terminus ND437_13580 PF01225 Mur ligase family, catalytic domain ND437_13580 PF02875 Mur ligase family, glutamate ligase domain ND437_13580 PF08245 Mur ligase middle domain ND437_13585 PF03033 Glycosyltransferase family 28 N-terminal domain ND437_13585 PF04101 Glycosyltransferase family 28 C-terminal domain ND437_13590 PF01098 Cell cycle protein ND437_13595 PF08245 Mur ligase middle domain ND437_13595 PF02875 Mur ligase family, glutamate ligase domain ND437_13600 PF00953 Glycosyl transferase family 4 ND437_13600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND437_13605 PF01225 Mur ligase family, catalytic domain ND437_13605 PF02875 Mur ligase family, glutamate ligase domain ND437_13605 PF08245 Mur ligase middle domain ND437_13610 PF01225 Mur ligase family, catalytic domain ND437_13610 PF08245 Mur ligase middle domain ND437_13610 PF02875 Mur ligase family, glutamate ligase domain ND437_13615 PF03717 Penicillin-binding Protein dimerisation domain ND437_13615 PF00905 Penicillin binding protein transpeptidase domain ND437_13620 PF04999 Cell division protein FtsL ND437_13625 PF01795 MraW methylase family ND437_13630 PF02381 MraZ protein, putative antitoxin-like ND437_13635 PF06610 L-alanine exporter ND437_13640 PF12323 Helix-turn-helix domain ND437_13640 PF01385 Probable transposase ND437_13640 PF07282 Putative transposase DNA-binding domain ND437_13645 PF01797 Transposase IS200 like ND437_13650 PF00356 Bacterial regulatory proteins, lacI family ND437_13650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND437_13655 PF10369 Small subunit of acetolactate synthase ND437_13660 PF00205 Thiamine pyrophosphate enzyme, central domain ND437_13660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND437_13660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND437_13665 PF00501 AMP-binding enzyme ND437_13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_13670 PF03466 LysR substrate binding domain ND437_13675 PF00682 HMGL-like ND437_13675 PF08502 LeuA allosteric (dimerisation) domain ND437_13680 PF00180 Isocitrate/isopropylmalate dehydrogenase ND437_13685 PF00330 Aconitase family (aconitate hydratase) ND437_13690 PF00694 Aconitase C-terminal domain ND437_13695 PF07690 Major Facilitator Superfamily ND437_13705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND437_13705 PF12793 Sugar transport-related sRNA regulator N-term ND437_13715 PF00528 Binding-protein-dependent transport system inner membrane component ND437_13720 PF00005 ABC transporter ND437_13725 PF09335 SNARE associated Golgi protein ND437_13730 PF00136 DNA polymerase family B ND437_13730 PF03104 DNA polymerase family B, exonuclease domain ND437_13735 PF12137 RNA polymerase recycling family C-terminal ND437_13735 PF18337 RapA N-terminal Tudor like domain ND437_13735 PF00176 SNF2 family N-terminal domain ND437_13735 PF18339 RapA N-terminal Tudor like domain 1 ND437_13735 PF00271 Helicase conserved C-terminal domain ND437_13740 PF00849 RNA pseudouridylate synthase ND437_13745 PF05099 Tellurite resistance protein TerB ND437_13745 PF00226 DnaJ domain ND437_13750 PF03968 OstA-like protein ND437_13750 PF04453 LPS transport system D ND437_13755 PF09312 SurA N-terminal domain ND437_13755 PF00639 PPIC-type PPIASE domain ND437_13760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND437_13765 PF00398 Ribosomal RNA adenine dimethylase ND437_13770 PF04379 ApaG domain ND437_13775 PF00149 Calcineurin-like phosphoesterase ND437_13785 PF00186 Dihydrofolate reductase ND437_13790 PF12821 Threonine/Serine exporter, ThrE ND437_13795 PF06738 Putative threonine/serine exporter ND437_13800 PF01810 LysE type translocator ND437_13805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND437_13805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND437_13805 PF02142 MGS-like domain ND437_13810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND437_13810 PF00117 Glutamine amidotransferase class-I ND437_13815 PF01113 Dihydrodipicolinate reductase, N-terminus ND437_13815 PF05173 Dihydrodipicolinate reductase, C-terminus ND437_13820 PF02401 LytB protein ND437_13825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND437_13830 PF01252 Signal peptidase (SPase) II ND437_13835 PF00133 tRNA synthetases class I (I, L, M and V) ND437_13835 PF08264 Anticodon-binding domain of tRNA ND437_13835 PF06827 Zinc finger found in FPG and IleRS ND437_13840 PF01687 Riboflavin kinase ND437_13840 PF06574 FAD synthetase ND437_13845 PF01649 Ribosomal protein S20 ND437_13850 PF03466 LysR substrate binding domain ND437_13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_13855 PF06965 Na+/H+ antiporter 1 ND437_13860 PF00226 DnaJ domain ND437_13860 PF00684 DnaJ central domain ND437_13860 PF01556 DnaJ C terminal domain ND437_13865 PF00012 Hsp70 protein ND437_13870 PF01184 GPR1/FUN34/yaaH family ND437_13880 PF07690 Major Facilitator Superfamily ND437_13885 PF00994 Probable molybdopterin binding domain ND437_13890 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND437_13895 PF03883 Peroxide stress protein YaaA ND437_13900 PF00291 Pyridoxal-phosphate dependent enzyme ND437_13900 PF14821 Threonine synthase N terminus ND437_13905 PF08544 GHMP kinases C terminal ND437_13905 PF00288 GHMP kinases N terminal domain ND437_13910 PF00696 Amino acid kinase family ND437_13910 PF13840 ACT domain ND437_13910 PF00742 Homoserine dehydrogenase ND437_13910 PF03447 Homoserine dehydrogenase, NAD binding domain ND437_13910 PF01842 ACT domain ND437_13915 PF08254 Threonine leader peptide ND437_13925 PF00072 Response regulator receiver domain ND437_13925 PF00486 Transcriptional regulatory protein, C terminal ND437_13930 PF05981 CreA protein ND437_13935 PF06445 GyrI-like small molecule binding domain ND437_13935 PF12833 Helix-turn-helix domain ND437_13940 PF00300 Histidine phosphatase superfamily (branch 1) ND437_13945 PF01931 Protein of unknown function DUF84 ND437_13950 PF01371 Trp repressor protein ND437_13955 PF14718 Soluble lytic murein transglycosylase L domain ND437_13955 PF01464 Transglycosylase SLT domain ND437_13960 PF00689 Cation transporting ATPase, C-terminus ND437_13960 PF00690 Cation transporter/ATPase, N-terminus ND437_13975 PF00005 ABC transporter ND437_13975 PF12848 ABC transporter ND437_13980 PF13521 AAA domain ND437_13980 PF01381 Helix-turn-helix ND437_13985 PF18073 Rubredoxin metal binding domain ND437_13990 PF18429 Domain of unknown function (DUF5609) ND437_13995 PF10144 Bacterial virulence factor haemolysin ND437_14000 PF01048 Phosphorylase superfamily ND437_14005 PF01676 Metalloenzyme superfamily ND437_14010 PF02885 Glycosyl transferase family, helical bundle domain ND437_14010 PF00591 Glycosyl transferase family, a/b domain ND437_14010 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND437_14015 PF01791 DeoC/LacD family aldolase ND437_14020 PF07670 Nucleoside recognition ND437_14020 PF07662 Na+ dependent nucleoside transporter C-terminus ND437_14020 PF01773 Na+ dependent nucleoside transporter N-terminus ND437_14025 PF01026 TatD related DNase ND437_14030 PF01734 Patatin-like phospholipase ND437_14035 PF07043 Protein of unknown function (DUF1328) ND437_14040 PF04972 BON domain ND437_14045 PF16658 Class II release factor RF3, C-terminal domain ND437_14045 PF03144 Elongation factor Tu domain 2 ND437_14045 PF00009 Elongation factor Tu GTP binding domain ND437_14050 PF00583 Acetyltransferase (GNAT) family ND437_14055 PF03603 DNA polymerase III psi subunit ND437_14060 PF08468 Methyltransferase small domain N-terminal ND437_14060 PF05175 Methyltransferase small domain ND437_14080 PF07256 Protein of unknown function (DUF1435) ND437_14085 PF00990 Diguanylate cyclase, GGDEF domain ND437_14090 PF00158 Sigma-54 interaction domain ND437_14090 PF00989 PAS fold ND437_14090 PF02954 Bacterial regulatory protein, Fis family ND437_14095 PF00381 PTS HPr component phosphorylation site ND437_14095 PF00391 PEP-utilising enzyme, mobile domain ND437_14095 PF05524 PEP-utilising enzyme, N-terminal ND437_14095 PF03610 PTS system fructose IIA component ND437_14100 PF02734 DAK2 domain ND437_14105 PF02733 Dak1 domain ND437_14110 PF00465 Iron-containing alcohol dehydrogenase ND437_14115 PF00873 AcrB/AcrD/AcrF family ND437_14120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND437_14135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND437_14140 PF10696 Protein of unknown function (DUF2501) ND437_14150 PF01116 Fructose-bisphosphate aldolase class-II ND437_14160 PF00884 Sulfatase ND437_14165 PF13186 Iron-sulfur cluster-binding domain ND437_14165 PF04055 Radical SAM superfamily ND437_14170 PF07470 Glycosyl Hydrolase Family 88 ND437_14180 PF04962 KduI/IolB family ND437_14185 PF01979 Amidohydrolase family ND437_14195 PF03613 PTS system mannose/fructose/sorbose family IID component ND437_14200 PF03609 PTS system sorbose-specific iic component ND437_14205 PF03830 PTS system sorbose subfamily IIB component ND437_14210 PF01380 SIS domain ND437_14215 PF08013 Tagatose 6 phosphate kinase ND437_14220 PF08220 DeoR-like helix-turn-helix domain ND437_14220 PF00455 DeoR C terminal sensor domain ND437_14225 PF00884 Sulfatase ND437_14230 PF09092 Lyase, N terminal ND437_14230 PF09093 Lyase, catalytic ND437_14230 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND437_14230 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND437_14245 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ND437_14245 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ND437_14245 PF02278 Polysaccharide lyase family 8, super-sandwich domain ND437_14250 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND437_14255 PF01344 Kelch motif ND437_14330 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ND437_14335 PF04221 RelB antitoxin ND437_14360 PF03739 Lipopolysaccharide export system permease LptF/LptG ND437_14365 PF03739 Lipopolysaccharide export system permease LptF/LptG ND437_14370 PF02789 Cytosol aminopeptidase family, N-terminal domain ND437_14370 PF00883 Cytosol aminopeptidase family, catalytic domain ND437_14375 PF04364 DNA polymerase III chi subunit, HolC ND437_14380 PF10458 Valyl tRNA synthetase tRNA binding arm ND437_14380 PF00133 tRNA synthetases class I (I, L, M and V) ND437_14380 PF08264 Anticodon-binding domain of tRNA ND437_14385 PF00583 Acetyltransferase (GNAT) family ND437_14390 PF06877 Regulator of ribonuclease activity B ND437_14395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND437_14395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND437_14400 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND437_14400 PF03477 ATP cone domain ND437_14410 PF06754 Phosphonate metabolism protein PhnG ND437_14415 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND437_14420 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND437_14425 PF06007 Phosphonate metabolism protein PhnJ ND437_14430 PF00005 ABC transporter ND437_14435 PF00005 ABC transporter ND437_14440 PF07969 Amidohydrolase family ND437_14450 PF12706 Beta-lactamase superfamily domain ND437_14455 PF13460 NAD(P)H-binding ND437_14465 PF10940 Protein of unknown function (DUF2618) ND437_14470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND437_14470 PF01276 Orn/Lys/Arg decarboxylase, major domain ND437_14470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND437_14475 PF13520 Amino acid permease ND437_14480 PF01541 GIY-YIG catalytic domain ND437_14485 PF13508 Acetyltransferase (GNAT) domain ND437_14490 PF02036 SCP-2 sterol transfer family ND437_14495 PF01136 Peptidase family U32 ND437_14500 PF01136 Peptidase family U32 ND437_14505 PF03313 Serine dehydratase alpha chain ND437_14515 PF00296 Luciferase-like monooxygenase ND437_14520 PF12343 Cold shock protein DEAD box A ND437_14520 PF00270 DEAD/DEAH box helicase ND437_14520 PF03880 DbpA RNA binding domain ND437_14520 PF00271 Helicase conserved C-terminal domain ND437_14525 PF07719 Tetratricopeptide repeat ND437_14525 PF13181 Tetratricopeptide repeat ND437_14530 PF00013 KH domain ND437_14530 PF00575 S1 RNA binding domain ND437_14530 PF03725 3' exoribonuclease family, domain 2 ND437_14530 PF01138 3' exoribonuclease family, domain 1 ND437_14530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND437_14535 PF00312 Ribosomal protein S15 ND437_14540 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND437_14540 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND437_14540 PF09157 Pseudouridine synthase II TruB, C-terminal ND437_14545 PF02033 Ribosome-binding factor A ND437_14550 PF08364 Bacterial translation initiation factor IF-2 associated region ND437_14550 PF11987 Translation-initiation factor 2 ND437_14550 PF03144 Elongation factor Tu domain 2 ND437_14550 PF00009 Elongation factor Tu GTP binding domain ND437_14550 PF04760 Translation initiation factor IF-2, N-terminal region ND437_14555 PF08529 NusA N-terminal domain ND437_14555 PF00575 S1 RNA binding domain ND437_14555 PF13184 NusA-like KH domain ND437_14560 PF17384 RimP C-terminal SH3 domain ND437_14560 PF02576 RimP N-terminal domain ND437_14575 PF03840 Preprotein translocase SecG subunit ND437_14580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND437_14580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND437_14580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND437_14580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND437_14585 PF00809 Pterin binding enzyme ND437_14590 PF01434 Peptidase family M41 ND437_14590 PF06480 FtsH Extracellular ND437_14590 PF17862 AAA+ lid domain ND437_14590 PF00004 ATPase family associated with various cellular activities (AAA) ND437_14595 PF01728 FtsJ-like methyltransferase ND437_14600 PF01985 CRS1 / YhbY (CRM) domain ND437_14605 PF01272 Transcription elongation factor, GreA/GreB, C-term ND437_14605 PF03449 Transcription elongation factor, N-terminal ND437_14610 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND437_14615 PF00486 Transcriptional regulatory protein, C terminal ND437_14615 PF00072 Response regulator receiver domain ND437_14620 PF00672 HAMP domain ND437_14620 PF00512 His Kinase A (phospho-acceptor) domain ND437_14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_14625 PF01926 50S ribosome-binding GTPase ND437_14625 PF01018 GTP1/OBG ND437_14630 PF00892 EamA-like transporter family ND437_14635 PF01016 Ribosomal L27 protein ND437_14640 PF00829 Ribosomal prokaryotic L21 protein ND437_14645 PF00348 Polyprenyl synthetase ND437_14660 PF13693 Winged helix-turn-helix DNA-binding ND437_14665 PF00056 lactate/malate dehydrogenase, NAD binding domain ND437_14665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND437_14670 PF02863 Arginine repressor, C-terminal domain ND437_14670 PF01316 Arginine repressor, DNA binding domain ND437_14675 PF08245 Mur ligase middle domain ND437_14675 PF02875 Mur ligase family, glutamate ligase domain ND437_14675 PF01225 Mur ligase family, catalytic domain ND437_14680 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND437_14685 PF00719 Inorganic pyrophosphatase ND437_14690 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND437_14695 PF04357 TamB, inner membrane protein subunit of TAM complex ND437_14700 PF17243 POTRA domain TamA domain 1 ND437_14700 PF07244 Surface antigen variable number repeat ND437_14700 PF01103 Surface antigen ND437_14705 PF01625 Peptide methionine sulfoxide reductase ND437_14710 PF00571 CBS domain ND437_14710 PF01595 Cyclin M transmembrane N-terminal domain ND437_14710 PF03471 Transporter associated domain ND437_14715 PF06526 Protein of unknown function (DUF1107) ND437_14720 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND437_14725 PF00459 Inositol monophosphatase family ND437_14730 PF00149 Calcineurin-like phosphoesterase ND437_14730 PF02872 5'-nucleotidase, C-terminal domain ND437_14735 PF04405 Domain of Unknown function (DUF542) ND437_14735 PF01814 Hemerythrin HHE cation binding domain ND437_14740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND437_14740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND437_14745 PF08525 Opacity-associated protein A N-terminal motif ND437_14745 PF04225 Opacity-associated protein A LysM-like domain ND437_14750 PF03948 Ribosomal protein L9, C-terminal domain ND437_14750 PF01281 Ribosomal protein L9, N-terminal domain ND437_14755 PF01084 Ribosomal protein S18 ND437_14760 PF00436 Single-strand binding protein family ND437_14765 PF01250 Ribosomal protein S6 ND437_14775 PF00326 Prolyl oligopeptidase family ND437_14795 PF13954 PapC N-terminal domain ND437_14795 PF13953 PapC C-terminal domain ND437_14795 PF00577 Outer membrane usher protein ND437_14800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_14820 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND437_14820 PF00588 SpoU rRNA Methylase family ND437_14825 PF08461 Ribonuclease R winged-helix domain ND437_14825 PF17876 Cold shock domain ND437_14825 PF00575 S1 RNA binding domain ND437_14825 PF08206 Ribonuclease B OB domain ND437_14825 PF00773 RNB domain ND437_14830 PF02082 Transcriptional regulator ND437_14835 PF00709 Adenylosuccinate synthetase ND437_14840 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND437_14845 PF01145 SPFH domain / Band 7 family ND437_14850 PF12221 Bacterial membrane protein N terminal ND437_14850 PF01145 SPFH domain / Band 7 family ND437_14855 PF16360 GTP-binding GTPase Middle Region ND437_14855 PF01926 50S ribosome-binding GTPase ND437_14855 PF13167 GTP-binding GTPase N-terminal ND437_14860 PF17209 Hfq protein ND437_14870 PF01119 DNA mismatch repair protein, C-terminal domain ND437_14870 PF08676 MutL C terminal dimerisation domain ND437_14875 PF01520 N-acetylmuramoyl-L-alanine amidase ND437_14880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND437_14885 PF03853 YjeF-related protein N-terminus ND437_14885 PF01256 Carbohydrate kinase ND437_14890 PF08331 Domain of unknown function (DUF1730) ND437_14910 PF00929 Exonuclease ND437_14915 PF03193 RsgA GTPase ND437_14920 PF02666 Phosphatidylserine decarboxylase ND437_14925 PF00924 Mechanosensitive ion channel ND437_14925 PF12795 Mechanosensitive ion channel porin domain ND437_14925 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND437_14930 PF00152 tRNA synthetases class II (D, K and N) ND437_14935 PF00890 FAD binding domain ND437_14935 PF02910 Fumarate reductase flavoprotein C-term ND437_14940 PF13085 2Fe-2S iron-sulfur cluster binding domain ND437_14940 PF13183 4Fe-4S dicluster domain ND437_14945 PF02300 Fumarate reductase subunit C ND437_14950 PF02313 Fumarate reductase subunit D ND437_14955 PF08212 Lipocalin-like domain ND437_14960 PF00893 Small Multidrug Resistance protein ND437_14965 PF00419 Fimbrial protein ND437_14970 PF13953 PapC C-terminal domain ND437_14970 PF13954 PapC N-terminal domain ND437_14970 PF00577 Outer membrane usher protein ND437_14975 PF02753 Pili assembly chaperone PapD, C-terminal domain ND437_14975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_14985 PF00196 Bacterial regulatory proteins, luxR family ND437_14990 PF18416 N-acetylglucosamine binding protein domain 2 ND437_14990 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND437_14995 PF01132 Elongation factor P (EF-P) OB domain ND437_14995 PF08207 Elongation factor P (EF-P) KOW-like domain ND437_14995 PF09285 Elongation factor P, C-terminal ND437_15000 PF04055 Radical SAM superfamily ND437_15005 PF13698 Domain of unknown function (DUF4156) ND437_15010 PF00118 TCP-1/cpn60 chaperonin family ND437_15015 PF00166 Chaperonin 10 Kd subunit ND437_15020 PF04186 FxsA cytoplasmic membrane protein ND437_15025 PF00206 Lyase ND437_15025 PF10415 Fumarase C C-terminus ND437_15030 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND437_15035 PF03091 CutA1 divalent ion tolerance protein ND437_15040 PF11412 Disulphide bond corrector protein DsbC ND437_15040 PF02683 Cytochrome C biogenesis protein transmembrane region ND437_15055 PF00375 Sodium:dicarboxylate symporter family ND437_15060 PF13193 AMP-binding enzyme C-terminal domain ND437_15060 PF00501 AMP-binding enzyme ND437_15060 PF16177 Acetyl-coenzyme A synthetase N-terminus ND437_15065 PF04341 Protein of unknown function, DUF485 ND437_15070 PF00474 Sodium:solute symporter family ND437_15095 PF02142 MGS-like domain ND437_15095 PF01808 AICARFT/IMPCHase bienzyme ND437_15100 PF02844 Phosphoribosylglycinamide synthetase, N domain ND437_15100 PF02843 Phosphoribosylglycinamide synthetase, C domain ND437_15100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND437_15105 PF07356 Protein of unknown function (DUF1481) ND437_15110 PF00216 Bacterial DNA-binding protein ND437_15115 PF04222 Protein of unknown function (DUF416) ND437_15120 PF04493 Endonuclease V ND437_15125 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND437_15130 PF09297 NADH pyrophosphatase zinc ribbon domain ND437_15130 PF00293 NUDIX domain ND437_15135 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND437_15140 PF01964 Radical SAM ThiC family ND437_15140 PF13667 ThiC-associated domain ND437_15145 PF02581 Thiamine monophosphate synthase ND437_15150 PF00899 ThiF family ND437_15155 PF02597 ThiS family ND437_15160 PF05690 Thiazole biosynthesis protein ThiG ND437_15165 PF04055 Radical SAM superfamily ND437_15165 PF06968 Biotin and Thiamin Synthesis associated domain ND437_15170 PF04998 RNA polymerase Rpb1, domain 5 ND437_15170 PF05000 RNA polymerase Rpb1, domain 4 ND437_15170 PF04983 RNA polymerase Rpb1, domain 3 ND437_15170 PF00623 RNA polymerase Rpb1, domain 2 ND437_15170 PF04997 RNA polymerase Rpb1, domain 1 ND437_15175 PF04565 RNA polymerase Rpb2, domain 3 ND437_15175 PF04563 RNA polymerase beta subunit ND437_15175 PF04561 RNA polymerase Rpb2, domain 2 ND437_15175 PF00562 RNA polymerase Rpb2, domain 6 ND437_15175 PF04560 RNA polymerase Rpb2, domain 7 ND437_15175 PF10385 RNA polymerase beta subunit external 1 domain ND437_15180 PF00542 Ribosomal protein L7/L12 C-terminal domain ND437_15180 PF16320 Ribosomal protein L7/L12 dimerisation domain ND437_15185 PF00466 Ribosomal protein L10 ND437_15190 PF00687 Ribosomal protein L1p/L10e family ND437_15195 PF03946 Ribosomal protein L11, N-terminal domain ND437_15195 PF00298 Ribosomal protein L11, RNA binding domain ND437_15200 PF02357 Transcription termination factor nusG ND437_15200 PF00467 KOW motif ND437_15205 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND437_15210 PF03143 Elongation factor Tu C-terminal domain ND437_15210 PF03144 Elongation factor Tu domain 2 ND437_15210 PF00009 Elongation factor Tu GTP binding domain ND437_15235 PF00485 Phosphoribulokinase / Uridine kinase family ND437_15240 PF02237 Biotin protein ligase C terminal domain ND437_15240 PF08279 HTH domain ND437_15240 PF03099 Biotin/lipoate A/B protein ligase family ND437_15245 PF01565 FAD binding domain ND437_15245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND437_15270 PF12724 Flavodoxin domain ND437_15275 PF02386 Cation transport protein ND437_15280 PF01205 Uncharacterized protein family UPF0029 ND437_15280 PF09186 Domain of unknown function (DUF1949) ND437_15285 PF00557 Metallopeptidase family M24 ND437_15290 PF00378 Enoyl-CoA hydratase/isomerase ND437_15290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND437_15290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND437_15295 PF00108 Thiolase, N-terminal domain ND437_15295 PF02803 Thiolase, C-terminal domain ND437_15300 PF00175 Oxidoreductase NAD-binding domain ND437_15300 PF00970 Oxidoreductase FAD-binding domain ND437_15305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND437_15315 PF02357 Transcription termination factor nusG ND437_15320 PF00490 Delta-aminolevulinic acid dehydratase ND437_15325 PF01026 TatD related DNase ND437_15330 PF00902 Sec-independent protein translocase protein (TatC) ND437_15340 PF02416 mttA/Hcf106 family ND437_15345 PF03109 ABC1 family ND437_15350 PF02036 SCP-2 sterol transfer family ND437_15355 PF01209 ubiE/COQ5 methyltransferase family ND437_15360 PF02646 RmuC family ND437_15365 PF09335 SNARE associated Golgi protein ND437_15370 PF13722 5TM C-terminal transporter carbon starvation CstA ND437_15370 PF02554 Carbon starvation protein CstA ND437_15380 PF01048 Phosphorylase superfamily ND437_15385 PF01738 Dienelactone hydrolase family ND437_15390 PF01717 Cobalamin-independent synthase, Catalytic domain ND437_15390 PF08267 Cobalamin-independent synthase, N-terminal domain ND437_15395 PF03466 LysR substrate binding domain ND437_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_15400 PF00892 EamA-like transporter family ND437_15410 PF03009 Glycerophosphoryl diester phosphodiesterase family ND437_15415 PF17912 MalK OB fold domain ND437_15415 PF00005 ABC transporter ND437_15420 PF00528 Binding-protein-dependent transport system inner membrane component ND437_15425 PF00528 Binding-protein-dependent transport system inner membrane component ND437_15430 PF13416 Bacterial extracellular solute-binding protein ND437_15465 PF00005 ABC transporter ND437_15470 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND437_15470 PF00005 ABC transporter ND437_15475 PF11862 Domain of unknown function (DUF3382) ND437_15475 PF02653 Branched-chain amino acid transport system / permease component ND437_15480 PF02653 Branched-chain amino acid transport system / permease component ND437_15485 PF13458 Periplasmic binding protein ND437_15490 PF12568 Acetyltransferase (GNAT) domain, PanZ ND437_15495 PF02595 Glycerate kinase family ND437_15500 PF02447 GntP family permease ND437_15505 PF05651 Putative sugar diacid recognition ND437_15505 PF17853 GGDEF-like domain ND437_15505 PF13556 PucR C-terminal helix-turn-helix domain ND437_15510 PF00140 Sigma-70 factor, region 1.2 ND437_15510 PF04542 Sigma-70 region 2 ND437_15510 PF04545 Sigma-70, region 4 ND437_15515 PF02687 FtsX-like permease family ND437_15515 PF18075 FtsX extracellular domain ND437_15520 PF00005 ABC transporter ND437_15525 PF02881 SRP54-type protein, helical bundle domain ND437_15525 PF00448 SRP54-type protein, GTPase domain ND437_15525 PF02881 SRP54-type protein, helical bundle domain ND437_15525 PF00448 SRP54-type protein, GTPase domain ND437_15535 PF06611 Protein of unknown function (DUF1145) ND437_15550 PF07947 YhhN family ND437_15555 PF00403 Heavy-metal-associated domain ND437_15560 PF01206 Sulfurtransferase TusA ND437_15565 PF02592 Putative vitamin uptake transporter ND437_15570 PF08786 DcrB ND437_15575 PF13183 4Fe-4S dicluster domain ND437_15575 PF02754 Cysteine-rich domain ND437_15580 PF00890 FAD binding domain ND437_15585 PF04324 BFD-like [2Fe-2S] binding domain ND437_15585 PF01266 FAD dependent oxidoreductase ND437_15595 PF07690 Major Facilitator Superfamily ND437_15600 PF03009 Glycerophosphoryl diester phosphodiesterase family ND437_15610 PF12146 Serine aminopeptidase, S33 ND437_15615 PF01810 LysE type translocator ND437_15620 PF09382 RQC domain ND437_15620 PF16124 RecQ zinc-binding ND437_15620 PF00570 HRDC domain ND437_15620 PF00271 Helicase conserved C-terminal domain ND437_15620 PF00270 DEAD/DEAH box helicase ND437_15625 PF02253 Phospholipase A1 ND437_15630 PF03061 Thioesterase superfamily ND437_15635 PF00892 EamA-like transporter family ND437_15640 PF01544 CorA-like Mg2+ transporter protein ND437_15650 PF09370 Phosphoenolpyruvate hydrolase-like ND437_15665 PF00580 UvrD/REP helicase N-terminal domain ND437_15665 PF13361 UvrD-like helicase C-terminal domain ND437_15670 PF13419 Haloacid dehalogenase-like hydrolase ND437_15675 PF00589 Phage integrase family ND437_15675 PF02899 Phage integrase, N-terminal SAM-like domain ND437_15680 PF04340 Protein of unknown function, DUF484 ND437_15685 PF01678 Diaminopimelate epimerase ND437_15690 PF13627 Prokaryotic lipoprotein-attachment site ND437_15695 PF01491 Frataxin-like domain ND437_15700 PF01295 Adenylate cyclase, class-I ND437_15700 PF12633 Adenylate cyclase NT domain ND437_15705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND437_15705 PF03900 Porphobilinogen deaminase, C-terminal domain ND437_15710 PF02602 Uroporphyrinogen-III synthase HemD ND437_15715 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND437_15720 PF07219 HemY protein N-terminus ND437_15720 PF07719 Tetratricopeptide repeat ND437_15745 PF00324 Amino acid permease ND437_15750 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND437_15755 PF06899 WzyE protein, O-antigen assembly polymerase ND437_15760 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND437_15765 PF01943 Polysaccharide biosynthesis protein ND437_15770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND437_15780 PF00483 Nucleotidyl transferase ND437_15785 PF16363 GDP-mannose 4,6 dehydratase ND437_15790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND437_15790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND437_15790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND437_15795 PF02350 UDP-N-acetylglucosamine 2-epimerase ND437_15800 PF02706 Chain length determinant protein ND437_15805 PF00953 Glycosyl transferase family 4 ND437_15810 PF07497 Rho termination factor, RNA-binding domain ND437_15810 PF07498 Rho termination factor, N-terminal domain ND437_15810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND437_15815 PF00085 Thioredoxin ND437_15820 PF00271 Helicase conserved C-terminal domain ND437_15820 PF00270 DEAD/DEAH box helicase ND437_15825 PF02541 Ppx/GppA phosphatase family ND437_15830 PF13361 UvrD-like helicase C-terminal domain ND437_15830 PF00580 UvrD/REP helicase N-terminal domain ND437_15840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND437_15840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND437_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_15845 PF03466 LysR substrate binding domain ND437_15850 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ND437_15850 PF18416 N-acetylglucosamine binding protein domain 2 ND437_15855 PF00585 C-terminal regulatory domain of Threonine dehydratase ND437_15855 PF00291 Pyridoxal-phosphate dependent enzyme ND437_15860 PF00920 Dehydratase family ND437_15865 PF01063 Amino-transferase class IV ND437_15875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND437_15875 PF00205 Thiamine pyrophosphate enzyme, central domain ND437_15875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND437_15880 PF08046 IlvGEDA operon leader peptide ND437_15885 PF13335 Magnesium chelatase, subunit ChlI C-terminal ND437_15885 PF01078 Magnesium chelatase, subunit ChlI ND437_15890 PF04219 Protein of unknown function, DUF ND437_15895 PF03466 LysR substrate binding domain ND437_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_15940 PF01177 Asp/Glu/Hydantoin racemase ND437_15945 PF00593 TonB dependent receptor ND437_15945 PF07715 TonB-dependent Receptor Plug Domain ND437_15950 PF05958 tRNA (Uracil-5-)-methyltransferase ND437_15955 PF07226 Protein of unknown function (DUF1422) ND437_15960 PF00440 Bacterial regulatory proteins, tetR family ND437_15965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND437_15965 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_15970 PF03466 LysR substrate binding domain ND437_15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_15975 PF08534 Redoxin ND437_15975 PF00462 Glutaredoxin ND437_15980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND437_15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND437_16000 PF00529 HlyD membrane-fusion protein of T1SS ND437_16005 PF00005 ABC transporter ND437_16005 PF00664 ABC transporter transmembrane region ND437_16015 PF07715 TonB-dependent Receptor Plug Domain ND437_16015 PF00593 TonB dependent receptor ND437_16020 PF00206 Lyase ND437_16020 PF14698 Argininosuccinate lyase C-terminal ND437_16025 PF00764 Arginosuccinate synthase ND437_16030 PF00696 Amino acid kinase family ND437_16035 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND437_16035 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND437_16040 PF01546 Peptidase family M20/M25/M40 ND437_16040 PF07687 Peptidase dimerisation domain ND437_16045 PF00311 Phosphoenolpyruvate carboxylase ND437_16055 PF02219 Methylenetetrahydrofolate reductase ND437_16075 PF00742 Homoserine dehydrogenase ND437_16075 PF03447 Homoserine dehydrogenase, NAD binding domain ND437_16075 PF00696 Amino acid kinase family ND437_16080 PF01053 Cys/Met metabolism PLP-dependent enzyme ND437_16085 PF01340 Met Apo-repressor, MetJ ND437_16090 PF01197 Ribosomal protein L31 ND437_16095 PF00270 DEAD/DEAH box helicase ND437_16095 PF00271 Helicase conserved C-terminal domain ND437_16095 PF18074 Primosomal protein N C-terminal domain ND437_16095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND437_16095 PF17764 3′ DNA-binding domain (3′BD) ND437_16100 PF00356 Bacterial regulatory proteins, lacI family ND437_16105 PF05036 Sporulation related domain ND437_16110 PF00227 Proteasome subunit ND437_16115 PF10431 C-terminal, D2-small domain, of ClpB protein ND437_16115 PF07724 AAA domain (Cdc48 subfamily) ND437_16115 PF00004 ATPase family associated with various cellular activities (AAA) ND437_16120 PF01040 UbiA prenyltransferase family ND437_16125 PF03737 Aldolase/RraA ND437_16130 PF06005 Cell division protein ZapB ND437_16135 PF00230 Major intrinsic protein ND437_16140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND437_16140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND437_16145 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND437_16150 PF07690 Major Facilitator Superfamily ND437_16155 PF00970 Oxidoreductase FAD-binding domain ND437_16155 PF00175 Oxidoreductase NAD-binding domain ND437_16160 PF05656 Protein of unknown function (DUF805) ND437_16165 PF07305 Protein of unknown function (DUF1454) ND437_16170 PF00121 Triosephosphate isomerase ND437_16180 PF00365 Phosphofructokinase ND437_16185 PF16916 Dimerisation domain of Zinc Transporter ND437_16185 PF01545 Cation efflux family ND437_16190 PF07813 LTXXQ motif family protein ND437_16195 PF00072 Response regulator receiver domain ND437_16195 PF00486 Transcriptional regulatory protein, C terminal ND437_16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_16200 PF00512 His Kinase A (phospho-acceptor) domain ND437_16200 PF00672 HAMP domain ND437_16200 PF16527 Two-component sensor protein CpxA, periplasmic domain ND437_16205 PF00588 SpoU rRNA Methylase family ND437_16210 PF06426 Serine acetyltransferase, N-terminal ND437_16210 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_16215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND437_16215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND437_16220 PF02556 Preprotein translocase subunit SecB ND437_16225 PF00462 Glutaredoxin ND437_16230 PF00581 Rhodanese-like domain ND437_16235 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND437_16235 PF01676 Metalloenzyme superfamily ND437_16240 PF01551 Peptidase family M23 ND437_16245 PF04748 Divergent polysaccharide deacetylase ND437_16250 PF00107 Zinc-binding dehydrogenase ND437_16250 PF08240 Alcohol dehydrogenase GroES-like domain ND437_16255 PF00155 Aminotransferase class I and II ND437_16260 PF01370 NAD dependent epimerase/dehydratase family ND437_16265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND437_16270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND437_16275 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND437_16280 PF00535 Glycosyl transferase family 2 ND437_16285 PF01467 Cytidylyltransferase-like ND437_16290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND437_16290 PF06827 Zinc finger found in FPG and IleRS ND437_16290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND437_16295 PF00471 Ribosomal protein L33 ND437_16300 PF00830 Ribosomal L28 family ND437_16305 PF04002 RadC-like JAB domain ND437_16310 PF04127 DNA / pantothenate metabolism flavoprotein ND437_16310 PF02441 Flavoprotein ND437_16315 PF00692 dUTPase ND437_16320 PF00440 Bacterial regulatory proteins, tetR family ND437_16325 PF00156 Phosphoribosyl transferase domain ND437_16330 PF01138 3' exoribonuclease family, domain 1 ND437_16330 PF03725 3' exoribonuclease family, domain 2 ND437_16335 PF08340 Domain of unknown function (DUF1732) ND437_16335 PF03755 YicC-like family, N-terminal region ND437_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND437_16345 PF03466 LysR substrate binding domain ND437_16365 PF00378 Enoyl-CoA hydratase/isomerase ND437_16370 PF01773 Na+ dependent nucleoside transporter N-terminus ND437_16370 PF07662 Na+ dependent nucleoside transporter C-terminus ND437_16370 PF07670 Nucleoside recognition ND437_16385 PF03458 UPF0126 domain ND437_16390 PF03120 NAD-dependent DNA ligase OB-fold domain ND437_16390 PF01653 NAD-dependent DNA ligase adenylation domain ND437_16395 PF00625 Guanylate kinase ND437_16400 PF01192 RNA polymerase Rpb6 ND437_16405 PF02824 TGS domain ND437_16405 PF04607 Region found in RelA / SpoT proteins ND437_16405 PF13291 ACT domain ND437_16410 PF12105 SpoU, rRNA methylase, C-terminal ND437_16410 PF00588 SpoU rRNA Methylase family ND437_16415 PF17191 RecG wedge domain ND437_16415 PF00271 Helicase conserved C-terminal domain ND437_16415 PF00270 DEAD/DEAH box helicase ND437_16420 PF03616 Sodium/glutamate symporter ND437_16425 PF00860 Permease family ND437_16430 PF05170 AsmA family ND437_16435 PF09500 Putative thioesterase (yiiD_Cterm) ND437_16435 PF00583 Acetyltransferase (GNAT) family ND437_16440 PF02580 D-Tyr-tRNA(Tyr) deacylase ND437_16445 PF03631 Virulence factor BrkB ND437_16450 PF13419 Haloacid dehalogenase-like hydrolase ND437_16455 PF00679 Elongation factor G C-terminus ND437_16455 PF03144 Elongation factor Tu domain 2 ND437_16455 PF00009 Elongation factor Tu GTP binding domain ND437_16460 PF00120 Glutamine synthetase, catalytic domain ND437_16460 PF03951 Glutamine synthetase, beta-Grasp domain ND437_16465 PF00989 PAS fold ND437_16465 PF00512 His Kinase A (phospho-acceptor) domain ND437_16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_16470 PF00072 Response regulator receiver domain ND437_16470 PF02954 Bacterial regulatory protein, Fis family ND437_16470 PF00158 Sigma-54 interaction domain ND437_16475 PF06969 HemN C-terminal domain ND437_16475 PF04055 Radical SAM superfamily ND437_16480 PF04220 Der GTPase activator (YihI) ND437_16485 PF01926 50S ribosome-binding GTPase ND437_16490 PF01367 5'-3' exonuclease, C-terminal SAM fold ND437_16490 PF00476 DNA polymerase family A ND437_16490 PF01612 3'-5' exonuclease ND437_16490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND437_16495 PF01323 DSBA-like thioredoxin domain ND437_16500 PF01636 Phosphotransferase enzyme family ND437_16505 PF06288 Protein of unknown function (DUF1040) ND437_16510 PF12804 MobA-like NTP transferase domain ND437_16515 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND437_16540 PF00392 Bacterial regulatory proteins, gntR family ND437_16540 PF07729 FCD domain ND437_16545 PF00356 Bacterial regulatory proteins, lacI family ND437_16550 PF00294 pfkB family carbohydrate kinase ND437_16555 PF13407 Periplasmic binding protein domain ND437_16560 PF02653 Branched-chain amino acid transport system / permease component ND437_16565 PF00005 ABC transporter ND437_16570 PF05025 RbsD / FucU transport protein family ND437_16575 PF02705 K+ potassium transporter ND437_16580 PF17868 AAA lid domain ND437_16580 PF12592 Protein of unknown function (DUF3763) ND437_16580 PF07728 AAA domain (dynein-related subfamily) ND437_16585 PF05762 VWA domain containing CoxE-like protein ND437_16595 PF03590 Aspartate-ammonia ligase ND437_16600 PF01037 Lrp/AsnC ligand binding domain ND437_16605 PF00258 Flavodoxin ND437_16610 PF01134 Glucose inhibited division protein A ND437_16610 PF13932 GidA associated domain ND437_16615 PF02527 rRNA small subunit methyltransferase G ND437_16620 PF03899 ATP synthase I chain ND437_16625 PF00119 ATP synthase A chain ND437_16630 PF00137 ATP synthase subunit C ND437_16635 PF00430 ATP synthase B/B' CF(0) ND437_16640 PF00213 ATP synthase delta (OSCP) subunit ND437_16645 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND437_16645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND437_16645 PF00306 ATP synthase alpha/beta chain, C terminal domain ND437_16650 PF00231 ATP synthase ND437_16655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND437_16655 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND437_16660 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND437_16660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND437_16665 PF00132 Bacterial transferase hexapeptide (six repeats) ND437_16665 PF12804 MobA-like NTP transferase domain ND437_16670 PF01380 SIS domain ND437_16675 PF12849 PBP superfamily domain ND437_16680 PF00528 Binding-protein-dependent transport system inner membrane component ND437_16685 PF00528 Binding-protein-dependent transport system inner membrane component ND437_16690 PF00005 ABC transporter ND437_16695 PF01895 PhoU domain ND437_16700 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND437_16705 PF00528 Binding-protein-dependent transport system inner membrane component ND437_16710 PF00528 Binding-protein-dependent transport system inner membrane component ND437_16715 PF00860 Permease family ND437_16720 PF02203 Tar ligand binding domain homologue ND437_16720 PF00672 HAMP domain ND437_16720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND437_16730 PF02753 Pili assembly chaperone PapD, C-terminal domain ND437_16730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND437_16735 PF00577 Outer membrane usher protein ND437_16735 PF13954 PapC N-terminal domain ND437_16735 PF13953 PapC C-terminal domain ND437_16745 PF01926 50S ribosome-binding GTPase ND437_16745 PF12631 MnmE helical domain ND437_16745 PF10396 GTP-binding protein TrmE N-terminus ND437_16750 PF02096 60Kd inner membrane protein ND437_16750 PF14849 YidC periplasmic domain ND437_16755 PF01809 Putative membrane protein insertion efficiency factor ND437_16760 PF00825 Ribonuclease P ND437_16765 PF00468 Ribosomal protein L34 ND437_16800 PF18340 DNA relaxase TraI 2B/2B-like domain ND437_16800 PF08751 TrwC relaxase ND437_16800 PF07057 DNA helicase TraI ND437_16800 PF18272 single-stranded DNA binding TraI N-terminal subdomain ND437_16835 PF00589 Phage integrase family ND437_16915 PF06122 Conjugative relaxosome accessory transposon protein ND437_16940 PF06834 TraU protein ND437_17080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ND437_17090 PF00672 HAMP domain ND437_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND437_17090 PF00512 His Kinase A (phospho-acceptor) domain ND437_17090 PF01627 Hpt domain ND437_17090 PF00072 Response regulator receiver domain ND437_17090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND437_17095 PF02796 Helix-turn-helix domain of resolvase ND437_17095 PF00239 Resolvase, N terminal domain ND437_17100 PF13700 Domain of unknown function (DUF4158) ND437_17100 PF01526 Tn3 transposase DDE domain ND437_17175 PF01051 Initiator Replication protein