locus-tag class description LNQ24_000005 PF00308 Bacterial dnaA protein LNQ24_000005 PF08299 Bacterial dnaA protein helix-turn-helix LNQ24_000005 PF11638 DnaA N-terminal domain LNQ24_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain LNQ24_000010 PF02767 DNA polymerase III beta subunit, central domain LNQ24_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain LNQ24_000015 PF02463 RecF/RecN/SMC N terminal domain LNQ24_000020 PF01751 Toprim domain LNQ24_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_000020 PF00986 DNA gyrase B subunit, carboxyl terminus LNQ24_000020 PF00204 DNA gyrase B LNQ24_000020 PF18053 DNA gyrase B subunit insert domain LNQ24_000030 PF12566 Protein of unknown function (DUF3748) LNQ24_000030 PF07676 WD40-like Beta Propeller Repeat LNQ24_000035 PF07119 Protein of unknown function (DUF1375) LNQ24_000040 PF00011 Hsp20/alpha crystallin family LNQ24_000045 PF00011 Hsp20/alpha crystallin family LNQ24_000050 PF02080 TrkA-C domain LNQ24_000050 PF06826 Predicted Permease Membrane Region LNQ24_000055 PF00155 Aminotransferase class I and II LNQ24_000060 PF13488 Glycine zipper LNQ24_000060 PF00691 OmpA family LNQ24_000080 PF03352 Methyladenine glycosylase LNQ24_000090 PF02091 Glycyl-tRNA synthetase alpha subunit LNQ24_000095 PF05746 DALR anticodon binding domain LNQ24_000095 PF02092 Glycyl-tRNA synthetase beta subunit LNQ24_000100 PF11254 Protein of unknown function (DUF3053) LNQ24_000130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ24_000130 PF02378 Phosphotransferase system, EIIC LNQ24_000130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ24_000135 PF01232 Mannitol dehydrogenase Rossmann domain LNQ24_000135 PF08125 Mannitol dehydrogenase C-terminal domain LNQ24_000140 PF05068 Mannitol repressor LNQ24_000145 PF10928 Protein of unknown function (DUF2810) LNQ24_000150 PF03473 MOSC domain LNQ24_000150 PF03475 3-alpha domain LNQ24_000155 PF00672 HAMP domain LNQ24_000155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_000155 PF02203 Tar ligand binding domain homologue LNQ24_000160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNQ24_000160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNQ24_000165 PF02634 FdhD/NarQ family LNQ24_000175 PF13247 4Fe-4S dicluster domain LNQ24_000175 PF09163 Formate dehydrogenase N, transmembrane LNQ24_000180 PF01292 Prokaryotic cytochrome b561 LNQ24_000185 PF04216 Protein involved in formate dehydrogenase formation LNQ24_000190 PF03841 L-seryl-tRNA selenium transferase LNQ24_000190 PF12390 Selenocysteine synthase N terminal LNQ24_000195 PF09107 Elongation factor SelB, winged helix LNQ24_000195 PF09106 Elongation factor SelB, winged helix LNQ24_000195 PF03144 Elongation factor Tu domain 2 LNQ24_000195 PF00009 Elongation factor Tu GTP binding domain LNQ24_000200 PF01427 D-ala-D-ala dipeptidase LNQ24_000205 PF07690 Major Facilitator Superfamily LNQ24_000210 PF01757 Acyltransferase family LNQ24_000245 PF17392 Urocanase C-terminal domain LNQ24_000245 PF01175 Urocanase Rossmann-like domain LNQ24_000245 PF17391 Urocanase N-terminal domain LNQ24_000250 PF00221 Aromatic amino acid lyase LNQ24_000255 PF00324 Amino acid permease LNQ24_000265 PF12146 Serine aminopeptidase, S33 LNQ24_000270 PF08019 Phosphoethanolamine transferase EptA/EptB LNQ24_000270 PF00884 Sulfatase LNQ24_000275 PF00196 Bacterial regulatory proteins, luxR family LNQ24_000275 PF00072 Response regulator receiver domain LNQ24_000280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_000280 PF05231 MASE1 LNQ24_000280 PF07730 Histidine kinase LNQ24_000285 PF07690 Major Facilitator Superfamily LNQ24_000295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_000300 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_000305 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ24_000305 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_000310 PF00005 ABC transporter LNQ24_000310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_000315 PF00005 ABC transporter LNQ24_000315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_000320 PF11658 Cellulose biosynthesis protein BcsG LNQ24_000325 PF11120 Cellulose biosynthesis protein BcsF LNQ24_000330 PF10995 Cellulose biosynthesis GIL LNQ24_000340 PF06564 Cellulose biosynthesis protein BcsQ LNQ24_000345 PF03552 Cellulose synthase LNQ24_000345 PF00535 Glycosyl transferase family 2 LNQ24_000345 PF07238 PilZ domain LNQ24_000350 PF03170 Bacterial cellulose synthase subunit LNQ24_000355 PF01270 Glycosyl hydrolases family 8 LNQ24_000360 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LNQ24_000365 PF00672 HAMP domain LNQ24_000365 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_000365 PF17154 Gammaproteobacterial periplasmic sensor domain LNQ24_000365 PF00563 EAL domain LNQ24_000370 PF00375 Sodium:dicarboxylate symporter family LNQ24_000375 PF05193 Peptidase M16 inactive domain LNQ24_000375 PF00675 Insulinase (Peptidase family M16) LNQ24_000380 PF00294 pfkB family carbohydrate kinase LNQ24_000385 PF01361 Tautomerase enzyme LNQ24_000390 PF00563 EAL domain LNQ24_000395 PF02611 CDP-diacylglycerol pyrophosphatase LNQ24_000400 PF03631 Virulence factor BrkB LNQ24_000405 PF03466 LysR substrate binding domain LNQ24_000405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_000410 PF00375 Sodium:dicarboxylate symporter family LNQ24_000415 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ24_000425 PF11924 Inverse autotransporter, beta-domain LNQ24_000425 PF02369 Bacterial Ig-like domain (group 1) LNQ24_000425 PF09134 Invasin, domain 3 LNQ24_000425 PF07979 Intimin C-type lectin domain LNQ24_000430 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_000430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ24_000435 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LNQ24_000440 PF01432 Peptidase family M3 LNQ24_000445 PF04445 Putative SAM-dependent methyltransferase LNQ24_000450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LNQ24_000450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LNQ24_000455 PF00582 Universal stress protein family LNQ24_000460 PF10625 Universal stress protein B (UspB) LNQ24_000465 PF01384 Phosphate transporter family LNQ24_000475 PF08722 TnsA endonuclease N terminal LNQ24_000475 PF08721 TnsA endonuclease C terminal LNQ24_000520 PF00239 Resolvase, N terminal domain LNQ24_000520 PF02796 Helix-turn-helix domain of resolvase LNQ24_000525 PF02796 Helix-turn-helix domain of resolvase LNQ24_000525 PF00239 Resolvase, N terminal domain LNQ24_000540 PF01810 LysE type translocator LNQ24_000545 PF00583 Acetyltransferase (GNAT) family LNQ24_000550 PF17954 Quercetinase C-terminal cupin domain LNQ24_000550 PF02678 Pirin LNQ24_000555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ24_000555 PF00356 Bacterial regulatory proteins, lacI family LNQ24_000560 PF02447 GntP family permease LNQ24_000565 PF01202 Shikimate kinase LNQ24_000570 PF01914 MarC family integral membrane protein LNQ24_000575 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ24_000575 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ24_000580 PF07694 5TMR of 5TMR-LYT LNQ24_000580 PF06580 Histidine kinase LNQ24_000585 PF00128 Alpha amylase, catalytic domain LNQ24_000585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNQ24_000585 PF02806 Alpha amylase, C-terminal all-beta domain LNQ24_000590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNQ24_000590 PF00128 Alpha amylase, catalytic domain LNQ24_000590 PF18390 Glycogen debranching enzyme C-terminal domain LNQ24_000595 PF00483 Nucleotidyl transferase LNQ24_000600 PF08323 Starch synthase catalytic domain LNQ24_000600 PF00534 Glycosyl transferases group 1 LNQ24_000605 PF00343 Carbohydrate phosphorylase LNQ24_000610 PF01266 FAD dependent oxidoreductase LNQ24_000610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LNQ24_000615 PF08220 DeoR-like helix-turn-helix domain LNQ24_000615 PF00455 DeoR C terminal sensor domain LNQ24_000620 PF01694 Rhomboid family LNQ24_000620 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LNQ24_000625 PF00581 Rhodanese-like domain LNQ24_000630 PF17874 MalT-like TPR region LNQ24_000630 PF00196 Bacterial regulatory proteins, luxR family LNQ24_000635 PF00343 Carbohydrate phosphorylase LNQ24_000640 PF02446 4-alpha-glucanotransferase LNQ24_000645 PF01521 Iron-sulphur cluster biosynthesis LNQ24_000645 PF01106 NifU-like domain LNQ24_000650 PF00156 Phosphoribosyl transferase domain LNQ24_000655 PF00561 alpha/beta hydrolase fold LNQ24_000665 PF09012 FeoC like transcriptional regulator LNQ24_000670 PF07664 Ferrous iron transport protein B C terminus LNQ24_000670 PF17910 FeoB cytosolic helical domain LNQ24_000670 PF02421 Ferrous iron transport protein B LNQ24_000670 PF07670 Nucleoside recognition LNQ24_000675 PF04023 FeoA domain LNQ24_000680 PF17674 HHH domain LNQ24_000680 PF00575 S1 RNA binding domain LNQ24_000680 PF16921 Tex protein YqgF-like domain LNQ24_000680 PF09371 Tex-like protein N-terminal domain LNQ24_000705 PF03449 Transcription elongation factor, N-terminal LNQ24_000705 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ24_000710 PF00072 Response regulator receiver domain LNQ24_000710 PF00486 Transcriptional regulatory protein, C terminal LNQ24_000715 PF00672 HAMP domain LNQ24_000715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_000715 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_000720 PF01293 Phosphoenolpyruvate carboxykinase LNQ24_000725 PF01430 Hsp33 protein LNQ24_000730 PF01479 S4 domain LNQ24_000735 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_000740 PF07095 Intracellular growth attenuator protein IgaA LNQ24_000745 PF00293 NUDIX domain LNQ24_000750 PF00905 Penicillin binding protein transpeptidase domain LNQ24_000750 PF00912 Transglycosylase LNQ24_000750 PF17092 Penicillin-binding protein OB-like domain LNQ24_000775 PF03958 Bacterial type II/III secretion system short domain LNQ24_000775 PF00263 Bacterial type II and III secretion system protein LNQ24_000780 PF01202 Shikimate kinase LNQ24_000785 PF01761 3-dehydroquinate synthase LNQ24_000790 PF05036 Sporulation related domain LNQ24_000795 PF02086 D12 class N6 adenine-specific DNA methyltransferase LNQ24_000800 PF00834 Ribulose-phosphate 3 epimerase family LNQ24_000805 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_000810 PF00579 tRNA synthetases class I (W and Y) LNQ24_000815 PF10414 Sirohaem synthase dimerisation region LNQ24_000815 PF14824 Sirohaem biosynthesis protein central LNQ24_000815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ24_000820 PF01226 Formate/nitrite transporter LNQ24_000825 PF13806 Rieske-like [2Fe-2S] domain LNQ24_000830 PF04324 BFD-like [2Fe-2S] binding domain LNQ24_000830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LNQ24_000830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LNQ24_000830 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_000830 PF18267 Rubredoxin NAD+ reductase C-terminal domain LNQ24_000835 PF07969 Amidohydrolase family LNQ24_000840 PF07690 Major Facilitator Superfamily LNQ24_000855 PF00356 Bacterial regulatory proteins, lacI family LNQ24_000860 PF11975 Family 4 glycosyl hydrolase C-terminal domain LNQ24_000860 PF02056 Family 4 glycosyl hydrolase LNQ24_000865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNQ24_000870 PF00117 Glutamine amidotransferase class-I LNQ24_000875 PF00202 Aminotransferase class-III LNQ24_000880 PF12805 FUSC-like inner membrane protein yccS LNQ24_000885 PF00027 Cyclic nucleotide-binding domain LNQ24_000885 PF13545 Crp-like helix-turn-helix domain LNQ24_000890 PF02566 OsmC-like protein LNQ24_000910 PF00156 Phosphoribosyl transferase domain LNQ24_000915 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_000920 PF00485 Phosphoribulokinase / Uridine kinase family LNQ24_000925 PF06794 Uncharacterised protein family (UPF0270) LNQ24_000930 PF00561 alpha/beta hydrolase fold LNQ24_000935 PF01810 LysE type translocator LNQ24_000945 PF00535 Glycosyl transferase family 2 LNQ24_000950 PF00005 ABC transporter LNQ24_000950 PF12848 ABC transporter LNQ24_000955 PF02525 Flavodoxin-like fold LNQ24_000960 PF00999 Sodium/hydrogen exchanger family LNQ24_000960 PF02254 TrkA-N domain LNQ24_000965 PF09526 Probable metal-binding protein (DUF2387) LNQ24_000970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ24_000975 PF04102 SlyX LNQ24_000980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNQ24_000980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ24_000985 PF13309 HTH domain LNQ24_000985 PF08348 YheO-like PAS domain LNQ24_000990 PF02635 DsrE/DsrF-like family LNQ24_000995 PF02635 DsrE/DsrF-like family LNQ24_001000 PF04077 DsrH like protein LNQ24_001005 PF00164 Ribosomal protein S12/S23 LNQ24_001010 PF00177 Ribosomal protein S7p/S5e LNQ24_001015 PF00679 Elongation factor G C-terminus LNQ24_001015 PF00009 Elongation factor Tu GTP binding domain LNQ24_001015 PF03144 Elongation factor Tu domain 2 LNQ24_001015 PF14492 Elongation Factor G, domain II LNQ24_001015 PF03764 Elongation factor G, domain IV LNQ24_001020 PF03143 Elongation factor Tu C-terminal domain LNQ24_001020 PF03144 Elongation factor Tu domain 2 LNQ24_001020 PF00009 Elongation factor Tu GTP binding domain LNQ24_001025 PF04324 BFD-like [2Fe-2S] binding domain LNQ24_001030 PF00210 Ferritin-like domain LNQ24_001035 PF00338 Ribosomal protein S10p/S20e LNQ24_001040 PF00297 Ribosomal protein L3 LNQ24_001045 PF00573 Ribosomal protein L4/L1 family LNQ24_001050 PF00276 Ribosomal protein L23 LNQ24_001055 PF03947 Ribosomal Proteins L2, C-terminal domain LNQ24_001055 PF00181 Ribosomal Proteins L2, RNA binding domain LNQ24_001060 PF00203 Ribosomal protein S19 LNQ24_001065 PF00237 Ribosomal protein L22p/L17e LNQ24_001070 PF07650 KH domain LNQ24_001070 PF00189 Ribosomal protein S3, C-terminal domain LNQ24_001075 PF00252 Ribosomal protein L16p/L10e LNQ24_001080 PF00831 Ribosomal L29 protein LNQ24_001085 PF00366 Ribosomal protein S17 LNQ24_001090 PF00238 Ribosomal protein L14p/L23e LNQ24_001095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LNQ24_001095 PF00467 KOW motif LNQ24_001100 PF00281 Ribosomal protein L5 LNQ24_001100 PF00673 ribosomal L5P family C-terminus LNQ24_001105 PF00253 Ribosomal protein S14p/S29e LNQ24_001110 PF00410 Ribosomal protein S8 LNQ24_001115 PF00347 Ribosomal protein L6 LNQ24_001120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LNQ24_001125 PF00333 Ribosomal protein S5, N-terminal domain LNQ24_001125 PF03719 Ribosomal protein S5, C-terminal domain LNQ24_001130 PF00327 Ribosomal protein L30p/L7e LNQ24_001135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LNQ24_001140 PF00344 SecY translocase LNQ24_001145 PF00444 Ribosomal protein L36 LNQ24_001150 PF00416 Ribosomal protein S13/S18 LNQ24_001155 PF00411 Ribosomal protein S11 LNQ24_001160 PF01479 S4 domain LNQ24_001160 PF00163 Ribosomal protein S4/S9 N-terminal domain LNQ24_001165 PF01000 RNA polymerase Rpb3/RpoA insert domain LNQ24_001165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LNQ24_001165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LNQ24_001170 PF01196 Ribosomal protein L17 LNQ24_001175 PF13411 MerR HTH family regulatory protein LNQ24_001180 PF03889 Alternative ribosome-rescue factor A LNQ24_001185 PF01741 Large-conductance mechanosensitive channel, MscL LNQ24_001190 PF02254 TrkA-N domain LNQ24_001190 PF02080 TrkA-C domain LNQ24_001195 PF01189 16S rRNA methyltransferase RsmB/F LNQ24_001195 PF01029 NusB family LNQ24_001200 PF02911 Formyl transferase, C-terminal domain LNQ24_001200 PF00551 Formyl transferase LNQ24_001205 PF01327 Polypeptide deformylase LNQ24_001210 PF17782 DprA winged helix domain LNQ24_001210 PF02481 DNA recombination-mediator protein A LNQ24_001215 PF04361 Protein of unknown function (DUF494) LNQ24_001220 PF01396 Topoisomerase DNA binding C4 zinc finger LNQ24_001225 PF01300 Telomere recombination LNQ24_001230 PF08501 Shikimate dehydrogenase substrate binding domain LNQ24_001230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LNQ24_001230 PF01488 Shikimate / quinate 5-dehydrogenase LNQ24_001235 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_001260 PF01565 FAD binding domain LNQ24_001260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LNQ24_001265 PF02237 Biotin protein ligase C terminal domain LNQ24_001265 PF03099 Biotin/lipoate A/B protein ligase family LNQ24_001265 PF08279 HTH domain LNQ24_001270 PF00485 Phosphoribulokinase / Uridine kinase family LNQ24_001295 PF00009 Elongation factor Tu GTP binding domain LNQ24_001295 PF03143 Elongation factor Tu C-terminal domain LNQ24_001295 PF03144 Elongation factor Tu domain 2 LNQ24_001300 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LNQ24_001305 PF00467 KOW motif LNQ24_001305 PF02357 Transcription termination factor nusG LNQ24_001310 PF00298 Ribosomal protein L11, RNA binding domain LNQ24_001310 PF03946 Ribosomal protein L11, N-terminal domain LNQ24_001315 PF00687 Ribosomal protein L1p/L10e family LNQ24_001320 PF00466 Ribosomal protein L10 LNQ24_001325 PF00542 Ribosomal protein L7/L12 C-terminal domain LNQ24_001325 PF16320 Ribosomal protein L7/L12 dimerisation domain LNQ24_001330 PF04563 RNA polymerase beta subunit LNQ24_001330 PF04561 RNA polymerase Rpb2, domain 2 LNQ24_001330 PF10385 RNA polymerase beta subunit external 1 domain LNQ24_001330 PF00562 RNA polymerase Rpb2, domain 6 LNQ24_001330 PF04560 RNA polymerase Rpb2, domain 7 LNQ24_001330 PF04565 RNA polymerase Rpb2, domain 3 LNQ24_001335 PF05000 RNA polymerase Rpb1, domain 4 LNQ24_001335 PF04983 RNA polymerase Rpb1, domain 3 LNQ24_001335 PF00623 RNA polymerase Rpb1, domain 2 LNQ24_001335 PF04997 RNA polymerase Rpb1, domain 1 LNQ24_001335 PF04998 RNA polymerase Rpb1, domain 5 LNQ24_001340 PF04055 Radical SAM superfamily LNQ24_001340 PF06968 Biotin and Thiamin Synthesis associated domain LNQ24_001345 PF05690 Thiazole biosynthesis protein ThiG LNQ24_001350 PF02597 ThiS family LNQ24_001355 PF00899 ThiF family LNQ24_001360 PF02581 Thiamine monophosphate synthase LNQ24_001365 PF01964 Radical SAM ThiC family LNQ24_001365 PF13667 ThiC-associated domain LNQ24_001370 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LNQ24_001375 PF00293 NUDIX domain LNQ24_001375 PF09297 NADH pyrophosphatase zinc ribbon domain LNQ24_001380 PF01208 Uroporphyrinogen decarboxylase (URO-D) LNQ24_001385 PF04493 Endonuclease V LNQ24_001390 PF04222 Protein of unknown function (DUF416) LNQ24_001395 PF00216 Bacterial DNA-binding protein LNQ24_001400 PF07356 Protein of unknown function (DUF1481) LNQ24_001405 PF02843 Phosphoribosylglycinamide synthetase, C domain LNQ24_001405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LNQ24_001405 PF02844 Phosphoribosylglycinamide synthetase, N domain LNQ24_001410 PF01808 AICARFT/IMPCHase bienzyme LNQ24_001410 PF02142 MGS-like domain LNQ24_001450 PF04204 Homoserine O-succinyltransferase LNQ24_001455 PF01274 Malate synthase LNQ24_001460 PF00463 Isocitrate lyase family LNQ24_001465 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LNQ24_001470 PF01614 Bacterial transcriptional regulator LNQ24_001470 PF09339 IclR helix-turn-helix domain LNQ24_001475 PF02310 B12 binding domain LNQ24_001475 PF02607 B12 binding domain LNQ24_001475 PF02965 Vitamin B12 dependent methionine synthase, activation domain LNQ24_001475 PF00809 Pterin binding enzyme LNQ24_001475 PF02574 Homocysteine S-methyltransferase LNQ24_001490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_001490 PF03466 LysR substrate binding domain LNQ24_001570 PF16450 Proteasomal ATPase OB C-terminal domain LNQ24_001570 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_001570 PF17758 Proteasomal ATPase OB N-terminal domain LNQ24_001580 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LNQ24_001590 PF09134 Invasin, domain 3 LNQ24_001590 PF02369 Bacterial Ig-like domain (group 1) LNQ24_001590 PF11924 Inverse autotransporter, beta-domain LNQ24_001590 PF07979 Intimin C-type lectin domain LNQ24_001595 PF00872 Transposase, Mutator family LNQ24_001600 PF13332 Hemagglutinin repeat LNQ24_001600 PF05860 haemagglutination activity domain LNQ24_001605 PF08479 POTRA domain, ShlB-type LNQ24_001605 PF17287 POTRA domain LNQ24_001605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ24_001610 PF00696 Amino acid kinase family LNQ24_001610 PF01842 ACT domain LNQ24_001615 PF00342 Phosphoglucose isomerase LNQ24_001620 PF06146 Phosphate-starvation-inducible E LNQ24_001625 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_001630 PF14785 Maltose transport system permease protein MalF P2 domain LNQ24_001630 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_001635 PF01547 Bacterial extracellular solute-binding protein LNQ24_001645 PF17912 MalK OB fold domain LNQ24_001645 PF00005 ABC transporter LNQ24_001650 PF02264 LamB porin LNQ24_001655 PF07148 Maltose operon periplasmic protein precursor (MalM) LNQ24_001660 PF04345 Chorismate lyase LNQ24_001665 PF01040 UbiA prenyltransferase family LNQ24_001670 PF01553 Acyltransferase LNQ24_001675 PF01219 Prokaryotic diacylglycerol kinase LNQ24_001680 PF01726 LexA DNA binding domain LNQ24_001680 PF00717 Peptidase S24-like LNQ24_001685 PF01475 Ferric uptake regulator family LNQ24_001690 PF01207 Dihydrouridine synthase (Dus) LNQ24_001695 PF09583 Phage shock protein G (Phageshock_PspG) LNQ24_001700 PF08240 Alcohol dehydrogenase GroES-like domain LNQ24_001700 PF00107 Zinc-binding dehydrogenase LNQ24_001705 PF00772 DnaB-like helicase N terminal domain LNQ24_001705 PF03796 DnaB-like helicase C terminal domain LNQ24_001710 PF01168 Alanine racemase, N-terminal domain LNQ24_001710 PF00842 Alanine racemase, C-terminal domain LNQ24_001715 PF00155 Aminotransferase class I and II LNQ24_001720 PF04237 YjbR LNQ24_001725 PF00005 ABC transporter LNQ24_001725 PF17755 UvrA DNA-binding domain LNQ24_001725 PF17760 UvrA interaction domain LNQ24_001730 PF00436 Single-strand binding protein family LNQ24_001740 PF00860 Permease family LNQ24_001745 PF00999 Sodium/hydrogen exchanger family LNQ24_001750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_001750 PF03466 LysR substrate binding domain LNQ24_001755 PF03788 LrgA family LNQ24_001760 PF04172 LrgB-like family LNQ24_001765 PF00484 Carbonic anhydrase LNQ24_001770 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ24_001780 PF02954 Bacterial regulatory protein, Fis family LNQ24_001785 PF01207 Dihydrouridine synthase (Dus) LNQ24_001795 PF00474 Sodium:solute symporter family LNQ24_001800 PF06196 Protein of unknown function (DUF997) LNQ24_001805 PF02785 Biotin carboxylase C-terminal domain LNQ24_001805 PF00289 Biotin carboxylase, N-terminal domain LNQ24_001805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNQ24_001810 PF00364 Biotin-requiring enzyme LNQ24_001815 PF01220 Dehydroquinase class II LNQ24_001820 PF01794 Ferric reductase like transmembrane component LNQ24_001825 PF00174 Oxidoreductase molybdopterin binding domain LNQ24_001830 PF08240 Alcohol dehydrogenase GroES-like domain LNQ24_001830 PF00107 Zinc-binding dehydrogenase LNQ24_001835 PF00563 EAL domain LNQ24_001835 PF17157 Gammaproteobacterial periplasmic sensor domain LNQ24_001835 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_001845 PF04085 rod shape-determining protein MreC LNQ24_001850 PF04093 rod shape-determining protein MreD LNQ24_001855 PF02545 Maf-like protein LNQ24_001860 PF00575 S1 RNA binding domain LNQ24_001860 PF10150 Ribonuclease E/G family LNQ24_001865 PF13116 Protein of unknown function LNQ24_001865 PF13502 AsmA-like C-terminal region LNQ24_001870 PF00795 Carbon-nitrogen hydrolase LNQ24_001875 PF01523 Putative modulator of DNA gyrase LNQ24_001880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_001880 PF03466 LysR substrate binding domain LNQ24_001885 PF07869 Protein of unknown function (DUF1656) LNQ24_001890 PF13533 Biotin-lipoyl like LNQ24_001895 PF04632 Fusaric acid resistance protein family LNQ24_001900 PF00171 Aldehyde dehydrogenase family LNQ24_001905 PF00545 ribonuclease LNQ24_001910 PF01337 Barstar (barnase inhibitor) LNQ24_001915 PF04751 Protein of unknown function (DUF615) LNQ24_001920 PF01523 Putative modulator of DNA gyrase LNQ24_001925 PF07361 Cytochrome b562 LNQ24_001930 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ24_001930 PF14760 Rnk N-terminus LNQ24_001940 PF00689 Cation transporting ATPase, C-terminus LNQ24_001940 PF00690 Cation transporter/ATPase, N-terminus LNQ24_001945 PF00356 Bacterial regulatory proteins, lacI family LNQ24_001950 PF02378 Phosphotransferase system, EIIC LNQ24_001950 PF00367 phosphotransferase system, EIIB LNQ24_001955 PF00128 Alpha amylase, catalytic domain LNQ24_001955 PF11941 Domain of unknown function (DUF3459) LNQ24_001960 PF01042 Endoribonuclease L-PSP LNQ24_001965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LNQ24_001965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LNQ24_001970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNQ24_001970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNQ24_001975 PF00381 PTS HPr component phosphorylation site LNQ24_001980 PF03668 P-loop ATPase protein family LNQ24_001985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ24_001990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LNQ24_001995 PF00309 Sigma-54 factor, Activator interacting domain (AID) LNQ24_001995 PF04963 Sigma-54 factor, core binding domain LNQ24_001995 PF04552 Sigma-54, DNA binding domain LNQ24_002000 PF12399 Branched-chain amino acid ATP-binding cassette transporter LNQ24_002000 PF00005 ABC transporter LNQ24_002005 PF03968 OstA-like protein LNQ24_002010 PF06835 Lipopolysaccharide-assembly, LptC-related LNQ24_002020 PF00571 CBS domain LNQ24_002020 PF01380 SIS domain LNQ24_002025 PF01699 Sodium/calcium exchanger protein LNQ24_002030 PF00005 ABC transporter LNQ24_002035 PF02405 Permease MlaE LNQ24_002040 PF02470 MlaD protein LNQ24_002045 PF05494 MlaC protein LNQ24_002050 PF13466 STAS domain LNQ24_002055 PF01722 BolA-like protein LNQ24_002060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNQ24_002065 PF13180 PDZ domain LNQ24_002070 PF00595 PDZ domain LNQ24_002070 PF13180 PDZ domain LNQ24_002075 PF06295 Protein of unknown function (DUF1043) LNQ24_002080 PF03969 AFG1-like ATPase LNQ24_002085 PF00572 Ribosomal protein L13 LNQ24_002090 PF00380 Ribosomal protein S9/S16 LNQ24_002095 PF00043 Glutathione S-transferase, C-terminal domain LNQ24_002095 PF02798 Glutathione S-transferase, N-terminal domain LNQ24_002100 PF04386 Stringent starvation protein B LNQ24_002110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LNQ24_002110 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_002115 PF01493 GXGXG motif LNQ24_002115 PF00310 Glutamine amidotransferases class-II LNQ24_002115 PF04898 Glutamate synthase central domain LNQ24_002115 PF01645 Conserved region in glutamate synthase LNQ24_002120 PF04055 Radical SAM superfamily LNQ24_002120 PF16199 Radical_SAM C-terminal domain LNQ24_002130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_002130 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_002130 PF18415 Histidine kinase receptor ArcB trans-membrane domain LNQ24_002130 PF01627 Hpt domain LNQ24_002130 PF00989 PAS fold LNQ24_002130 PF00072 Response regulator receiver domain LNQ24_002140 PF00912 Transglycosylase LNQ24_002145 PF04972 BON domain LNQ24_002150 PF13580 SIS domain LNQ24_002155 PF02021 Uncharacterised protein family UPF0102 LNQ24_002160 PF04348 LppC putative lipoprotein LNQ24_002165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ24_002180 PF17954 Quercetinase C-terminal cupin domain LNQ24_002180 PF02678 Pirin LNQ24_002185 PF03466 LysR substrate binding domain LNQ24_002185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_002190 PF07681 DoxX LNQ24_002195 PF13997 YqjK-like protein LNQ24_002200 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LNQ24_002205 PF05957 Bacterial protein of unknown function (DUF883) LNQ24_002215 PF13721 SecD export protein N-terminal TM region LNQ24_002220 PF09335 SNARE associated Golgi protein LNQ24_002230 PF07729 FCD domain LNQ24_002230 PF00392 Bacterial regulatory proteins, gntR family LNQ24_002235 PF07690 Major Facilitator Superfamily LNQ24_002240 PF02614 Glucuronate isomerase LNQ24_002245 PF01232 Mannitol dehydrogenase Rossmann domain LNQ24_002245 PF08125 Mannitol dehydrogenase C-terminal domain LNQ24_002250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LNQ24_002250 PF08666 SAF domain LNQ24_002255 PF10688 Bacterial inner membrane protein LNQ24_002260 PF00375 Sodium:dicarboxylate symporter family LNQ24_002265 PF03741 Integral membrane protein TerC family LNQ24_002270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ24_002275 PF01863 Protein of unknown function DUF45 LNQ24_002285 PF05175 Methyltransferase small domain LNQ24_002290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNQ24_002290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_002295 PF08479 POTRA domain, ShlB-type LNQ24_002295 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ24_002295 PF17287 POTRA domain LNQ24_002305 PF04740 LXG domain of WXG superfamily LNQ24_002340 PF00535 Glycosyl transferase family 2 LNQ24_002345 PF08241 Methyltransferase domain LNQ24_002370 PF00106 short chain dehydrogenase LNQ24_002395 PF03979 Sigma-70 factor, region 1.1 LNQ24_002395 PF00140 Sigma-70 factor, region 1.2 LNQ24_002395 PF04542 Sigma-70 region 2 LNQ24_002395 PF04539 Sigma-70 region 3 LNQ24_002395 PF04545 Sigma-70, region 4 LNQ24_002395 PF04546 Sigma-70, non-essential region LNQ24_002400 PF01807 CHC2 zinc finger LNQ24_002400 PF10410 DnaB-helicase binding domain of primase LNQ24_002400 PF08278 DNA primase DnaG DnaB-binding LNQ24_002400 PF08275 DNA primase catalytic core, N-terminal domain LNQ24_002405 PF01165 Ribosomal protein S21 LNQ24_002410 PF00814 Glycoprotease family LNQ24_002415 PF02660 Glycerol-3-phosphate acyltransferase LNQ24_002420 PF02152 Dihydroneopterin aldolase LNQ24_002425 PF02673 Bacitracin resistance protein BacA LNQ24_002430 PF01966 HD domain LNQ24_002430 PF01743 Poly A polymerase head domain LNQ24_002430 PF12627 Probable RNA and SrmB- binding site of polymerase A LNQ24_002435 PF08239 Bacterial SH3 domain LNQ24_002440 PF01928 CYTH domain LNQ24_002445 PF03710 Glutamate-ammonia ligase adenylyltransferase LNQ24_002445 PF08335 GlnD PII-uridylyltransferase LNQ24_002450 PF00294 pfkB family carbohydrate kinase LNQ24_002450 PF01467 Cytidylyltransferase-like LNQ24_002460 PF04380 Membrane fusogenic activity LNQ24_002465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LNQ24_002470 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LNQ24_002475 PF03738 Glutathionylspermidine synthase preATP-grasp LNQ24_002480 PF06693 Protein of unknown function (DUF1190) LNQ24_002485 PF02321 Outer membrane efflux protein LNQ24_002490 PF00293 NUDIX domain LNQ24_002495 PF06853 Protein of unknown function (DUF1249) LNQ24_002500 PF00149 Calcineurin-like phosphoesterase LNQ24_002505 PF05728 Uncharacterised protein family (UPF0227) LNQ24_002510 PF01751 Toprim domain LNQ24_002510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_002510 PF00986 DNA gyrase B subunit, carboxyl terminus LNQ24_002510 PF00204 DNA gyrase B LNQ24_002515 PF03466 LysR substrate binding domain LNQ24_002515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_002520 PF02525 Flavodoxin-like fold LNQ24_002525 PF00521 DNA gyrase/topoisomerase IV, subunit A LNQ24_002525 PF03989 DNA gyrase C-terminal domain, beta-propeller LNQ24_002530 PF01553 Acyltransferase LNQ24_002535 PF07732 Multicopper oxidase LNQ24_002535 PF07731 Multicopper oxidase LNQ24_002540 PF04055 Radical SAM superfamily LNQ24_002540 PF11842 Domain of unknown function (DUF3362) LNQ24_002540 PF08497 Radical SAM N-terminal LNQ24_002545 PF00248 Aldo/keto reductase family LNQ24_002550 PF00465 Iron-containing alcohol dehydrogenase LNQ24_002555 PF06719 AraC-type transcriptional regulator N-terminus LNQ24_002555 PF12833 Helix-turn-helix domain LNQ24_002560 PF09335 SNARE associated Golgi protein LNQ24_002565 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ24_002570 PF01618 MotA/TolQ/ExbB proton channel family LNQ24_002575 PF02472 Biopolymer transport protein ExbD/TolR LNQ24_002625 PF04972 BON domain LNQ24_002625 PF00263 Bacterial type II and III secretion system protein LNQ24_002625 PF13629 Pilus formation protein N terminal region LNQ24_002650 PF08501 Shikimate dehydrogenase substrate binding domain LNQ24_002655 PF07715 TonB-dependent Receptor Plug Domain LNQ24_002655 PF00593 TonB dependent receptor LNQ24_002660 PF11806 Domain of unknown function (DUF3327) LNQ24_002660 PF00756 Putative esterase LNQ24_002665 PF03621 MbtH-like protein LNQ24_002670 PF00501 AMP-binding enzyme LNQ24_002670 PF13193 AMP-binding enzyme C-terminal domain LNQ24_002670 PF00668 Condensation domain LNQ24_002670 PF00550 Phosphopantetheine attachment site LNQ24_002670 PF00975 Thioesterase domain LNQ24_002680 PF00005 ABC transporter LNQ24_002685 PF01032 FecCD transport family LNQ24_002690 PF01032 FecCD transport family LNQ24_002695 PF05977 Transmembrane secretion effector LNQ24_002700 PF01497 Periplasmic binding protein LNQ24_002705 PF00425 chorismate binding enzyme LNQ24_002710 PF00501 AMP-binding enzyme LNQ24_002710 PF13193 AMP-binding enzyme C-terminal domain LNQ24_002715 PF00857 Isochorismatase family LNQ24_002715 PF00550 Phosphopantetheine attachment site LNQ24_002725 PF00975 Thioesterase domain LNQ24_002725 PF13193 AMP-binding enzyme C-terminal domain LNQ24_002725 PF00668 Condensation domain LNQ24_002725 PF00501 AMP-binding enzyme LNQ24_002725 PF00550 Phosphopantetheine attachment site LNQ24_002730 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_002735 PF01490 Transmembrane amino acid transporter protein LNQ24_002740 PF00871 Acetokinase family LNQ24_002745 PF01228 Glycine radical LNQ24_002745 PF02901 Pyruvate formate lyase-like LNQ24_002750 PF00294 pfkB family carbohydrate kinase LNQ24_002790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LNQ24_002790 PF01464 Transglycosylase SLT domain LNQ24_002795 PF04362 Bacterial Fe(2+) trafficking LNQ24_002800 PF00633 Helix-hairpin-helix motif LNQ24_002800 PF00730 HhH-GPD superfamily base excision DNA repair protein LNQ24_002800 PF14815 NUDIX domain LNQ24_002800 PF10576 Iron-sulfur binding domain of endonuclease III LNQ24_002805 PF02390 Putative methyltransferase LNQ24_002810 PF04320 Protein with unknown function (DUF469) LNQ24_002815 PF04960 Glutaminase LNQ24_002820 PF11101 Protein of unknown function (DUF2884) LNQ24_002825 PF06969 HemN C-terminal domain LNQ24_002825 PF04055 Radical SAM superfamily LNQ24_002830 PF01725 Ham1 family LNQ24_002835 PF02594 Uncharacterised ACR, YggU family COG1872 LNQ24_002840 PF02325 YGGT family LNQ24_002845 PF03807 NADP oxidoreductase coenzyme F420-dependent LNQ24_002845 PF14748 Pyrroline-5-carboxylate reductase dimerisation LNQ24_002850 PF01168 Alanine racemase, N-terminal domain LNQ24_002855 PF00437 Type II/IV secretion system protein LNQ24_002860 PF04371 Porphyromonas-type peptidyl-arginine deiminase LNQ24_002865 PF00795 Carbon-nitrogen hydrolase LNQ24_002870 PF03652 Holliday junction resolvase LNQ24_002875 PF02622 Uncharacterized ACR, COG1678 LNQ24_002880 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LNQ24_002880 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LNQ24_002885 PF04452 RNA methyltransferase LNQ24_002890 PF04231 Endonuclease I LNQ24_002895 PF10263 SprT-like family LNQ24_002895 PF17283 SprT-like zinc ribbon domain LNQ24_002905 PF04143 Sulphur transport LNQ24_002915 PF02772 S-adenosylmethionine synthetase, central domain LNQ24_002915 PF02773 S-adenosylmethionine synthetase, C-terminal domain LNQ24_002915 PF00438 S-adenosylmethionine synthetase, N-terminal domain LNQ24_002920 PF17810 Arginine decarboxylase helical bundle domain LNQ24_002920 PF17944 Arginine decarboxylase C-terminal helical extension LNQ24_002920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LNQ24_002930 PF02779 Transketolase, pyrimidine binding domain LNQ24_002930 PF02780 Transketolase, C-terminal domain LNQ24_002930 PF00456 Transketolase, thiamine diphosphate binding domain LNQ24_002935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LNQ24_002935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LNQ24_002940 PF00162 Phosphoglycerate kinase LNQ24_002945 PF01116 Fructose-bisphosphate aldolase class-II LNQ24_002950 PF00924 Mechanosensitive ion channel LNQ24_002950 PF05552 Conserved TM helix LNQ24_002955 PF01810 LysE type translocator LNQ24_002960 PF04402 Protein of unknown function (DUF541) LNQ24_002965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_002965 PF03466 LysR substrate binding domain LNQ24_002970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LNQ24_002975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ24_002975 PF01842 ACT domain LNQ24_002975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ24_002980 PF01812 5-formyltetrahydrofolate cyclo-ligase family LNQ24_002990 PF05164 Cell division protein ZapA LNQ24_002995 PF03695 Uncharacterised protein family (UPF0149) LNQ24_003000 PF05195 Aminopeptidase P, N-terminal domain LNQ24_003000 PF00557 Metallopeptidase family M24 LNQ24_003005 PF01494 FAD binding domain LNQ24_003010 PF01494 FAD binding domain LNQ24_003015 PF01571 Aminomethyltransferase folate-binding domain LNQ24_003015 PF08669 Glycine cleavage T-protein C-terminal barrel domain LNQ24_003020 PF01597 Glycine cleavage H-protein LNQ24_003025 PF02347 Glycine cleavage system P-protein LNQ24_003035 PF03006 Haemolysin-III related LNQ24_003040 PF01571 Aminomethyltransferase folate-binding domain LNQ24_003045 PF03937 Flavinator of succinate dehydrogenase LNQ24_003050 PF07254 Membrane-bound toxin component of toxin-antitoxin system LNQ24_003055 PF00258 Flavodoxin LNQ24_003060 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_003060 PF00589 Phage integrase family LNQ24_003065 PF10411 Disulfide bond isomerase protein N-terminus LNQ24_003065 PF13098 Thioredoxin-like domain LNQ24_003070 PF01368 DHH family LNQ24_003070 PF17768 RecJ OB domain LNQ24_003070 PF02272 DHHA1 domain LNQ24_003080 PF00152 tRNA synthetases class II (D, K and N) LNQ24_003080 PF01336 OB-fold nucleic acid binding domain LNQ24_003090 PF02405 Permease MlaE LNQ24_003095 PF00005 ABC transporter LNQ24_003120 PF03958 Bacterial type II/III secretion system short domain LNQ24_003120 PF00263 Bacterial type II and III secretion system protein LNQ24_003125 PF00437 Type II/IV secretion system protein LNQ24_003130 PF00482 Type II secretion system (T2SS), protein F LNQ24_003135 PF07963 Prokaryotic N-terminal methylation motif LNQ24_003135 PF08334 Type II secretion system (T2SS), protein G LNQ24_003145 PF07963 Prokaryotic N-terminal methylation motif LNQ24_003145 PF02501 Type II secretion system (T2SS), protein I LNQ24_003150 PF11612 Type II secretion system (T2SS), protein J LNQ24_003150 PF07963 Prokaryotic N-terminal methylation motif LNQ24_003195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_003195 PF03466 LysR substrate binding domain LNQ24_003200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_003200 PF03466 LysR substrate binding domain LNQ24_003205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LNQ24_003205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LNQ24_003210 PF00356 Bacterial regulatory proteins, lacI family LNQ24_003215 PF00501 AMP-binding enzyme LNQ24_003215 PF13193 AMP-binding enzyme C-terminal domain LNQ24_003215 PF01553 Acyltransferase LNQ24_003220 PF07690 Major Facilitator Superfamily LNQ24_003225 PF00248 Aldo/keto reductase family LNQ24_003230 PF03741 Integral membrane protein TerC family LNQ24_003235 PF02976 DNA mismatch repair enzyme MutH LNQ24_003240 PF00293 NUDIX domain LNQ24_003245 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ24_003245 PF00391 PEP-utilising enzyme, mobile domain LNQ24_003245 PF05524 PEP-utilising enzyme, N-terminal LNQ24_003245 PF01590 GAF domain LNQ24_003250 PF01790 Prolipoprotein diacylglyceryl transferase LNQ24_003255 PF00303 Thymidylate synthase LNQ24_003275 PF12528 Type II secretion prepilin peptidase dependent protein C LNQ24_003275 PF07963 Prokaryotic N-terminal methylation motif LNQ24_003280 PF17946 RecC C-terminal domain LNQ24_003285 PF05193 Peptidase M16 inactive domain LNQ24_003285 PF00675 Insulinase (Peptidase family M16) LNQ24_003285 PF16187 Middle or third domain of peptidase_M16 LNQ24_003290 PF00580 UvrD/REP helicase N-terminal domain LNQ24_003290 PF13361 UvrD-like helicase C-terminal domain LNQ24_003290 PF12705 PD-(D/E)XK nuclease superfamily LNQ24_003295 PF13538 UvrD-like helicase C-terminal domain LNQ24_003300 PF00696 Amino acid kinase family LNQ24_003300 PF00583 Acetyltransferase (GNAT) family LNQ24_003305 PF01520 N-acetylmuramoyl-L-alanine amidase LNQ24_003305 PF11741 AMIN domain LNQ24_003325 PF03562 MltA specific insert domain LNQ24_003325 PF06725 3D domain LNQ24_003330 PF00899 ThiF family LNQ24_003335 PF02657 Fe-S metabolism associated domain LNQ24_003340 PF00266 Aminotransferase class-V LNQ24_003345 PF06004 Bacterial protein of unknown function (DUF903) LNQ24_003350 PF03466 LysR substrate binding domain LNQ24_003350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_003355 PF04241 Protein of unknown function (DUF423) LNQ24_003360 PF18125 RlmM ferredoxin-like domain LNQ24_003360 PF01728 FtsJ-like methyltransferase LNQ24_003365 PF01367 5'-3' exonuclease, C-terminal SAM fold LNQ24_003365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNQ24_003370 PF03641 Possible lysine decarboxylase LNQ24_003370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LNQ24_003370 PF11892 Domain of unknown function (DUF3412) LNQ24_003375 PF14489 QueF-like protein LNQ24_003375 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LNQ24_003380 PF07348 Syd protein (SUKH-2) LNQ24_003385 PF04287 tRNA pseudouridine synthase C LNQ24_003390 PF00849 RNA pseudouridylate synthase LNQ24_003395 PF00258 Flavodoxin LNQ24_003400 PF11944 Protein of unknown function (DUF3461) LNQ24_003405 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_003405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LNQ24_003405 PF14602 Hexapeptide repeat of succinyl-transferase LNQ24_003410 PF01909 Nucleotidyltransferase domain LNQ24_003410 PF01842 ACT domain LNQ24_003410 PF08335 GlnD PII-uridylyltransferase LNQ24_003410 PF01966 HD domain LNQ24_003415 PF00557 Metallopeptidase family M24 LNQ24_003425 PF00318 Ribosomal protein S2 LNQ24_003430 PF00889 Elongation factor TS LNQ24_003435 PF00696 Amino acid kinase family LNQ24_003440 PF01765 Ribosome recycling factor LNQ24_003445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LNQ24_003445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LNQ24_003445 PF13288 DXP reductoisomerase C-terminal domain LNQ24_003450 PF01255 Putative undecaprenyl diphosphate synthase LNQ24_003460 PF17820 PDZ domain LNQ24_003460 PF02163 Peptidase family M50 LNQ24_003465 PF01103 Surface antigen LNQ24_003465 PF07244 Surface antigen variable number repeat LNQ24_003470 PF03938 Outer membrane protein (OmpH-like) LNQ24_003475 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_003475 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LNQ24_003480 PF07977 FabA-like domain LNQ24_003485 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LNQ24_003485 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_003490 PF02684 Lipid-A-disaccharide synthetase LNQ24_003495 PF01351 Ribonuclease HII LNQ24_003500 PF07733 Bacterial DNA polymerase III alpha NTPase domain LNQ24_003500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LNQ24_003500 PF14579 Helix-hairpin-helix motif LNQ24_003500 PF02811 PHP domain LNQ24_003500 PF01336 OB-fold nucleic acid binding domain LNQ24_003505 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LNQ24_003520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNQ24_003525 PF01171 PP-loop family LNQ24_003525 PF11734 TilS substrate C-terminal domain LNQ24_003525 PF09179 TilS substrate binding domain LNQ24_003530 PF00034 Cytochrome c LNQ24_003535 PF07073 Modulator of Rho-dependent transcription termination (ROF) LNQ24_003540 PF06786 Uncharacterised protein family (UPF0253) LNQ24_003545 PF07152 YaeQ protein LNQ24_003550 PF00472 RF-1 domain LNQ24_003555 PF17185 NlpE C-terminal OB domain LNQ24_003555 PF04170 NlpE N-terminal domain LNQ24_003560 PF03129 Anticodon binding domain LNQ24_003560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ24_003560 PF04073 Aminoacyl-tRNA editing domain LNQ24_003565 PF01980 tRNA-methyltransferase O LNQ24_003565 PF18389 TrmO C-terminal domain LNQ24_003570 PF16358 RcsF lipoprotein LNQ24_003575 PF03180 NLPA lipoprotein LNQ24_003580 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_003585 PF09383 NIL domain LNQ24_003585 PF00005 ABC transporter LNQ24_003620 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ24_003625 PF01464 Transglycosylase SLT domain LNQ24_003625 PF01476 LysM domain LNQ24_003630 PF16123 Hydroxyacylglutathione hydrolase C-terminus LNQ24_003630 PF00753 Metallo-beta-lactamase superfamily LNQ24_003635 PF08241 Methyltransferase domain LNQ24_003640 PF00075 RNase H LNQ24_003645 PF00929 Exonuclease LNQ24_003655 PF09317 Domain of unknown function (DUF1974) LNQ24_003655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNQ24_003655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNQ24_003660 PF13580 SIS domain LNQ24_003665 PF13230 Glutamine amidotransferases class-II LNQ24_003670 PF03734 L,D-transpeptidase catalytic domain LNQ24_003675 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LNQ24_003675 PF11973 NQRA C-terminal domain LNQ24_003680 PF03116 NQR2, RnfD, RnfE family LNQ24_003685 PF04205 FMN-binding domain LNQ24_003690 PF02508 Rnf-Nqr subunit, membrane protein LNQ24_003695 PF02508 Rnf-Nqr subunit, membrane protein LNQ24_003700 PF00970 Oxidoreductase FAD-binding domain LNQ24_003700 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ24_003700 PF00175 Oxidoreductase NAD-binding domain LNQ24_003705 PF02424 ApbE family LNQ24_003710 PF04400 (Na+)-NQR maturation NqrM LNQ24_003715 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ24_003720 PF11799 impB/mucB/samB family C-terminal domain LNQ24_003720 PF00817 impB/mucB/samB family LNQ24_003720 PF11798 IMS family HHH motif LNQ24_003725 PF07687 Peptidase dimerisation domain LNQ24_003725 PF01546 Peptidase family M20/M25/M40 LNQ24_003730 PF00156 Phosphoribosyl transferase domain LNQ24_003735 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LNQ24_003740 PF07417 Sigma factor-binding transcriptional regulator Crl LNQ24_003745 PF00696 Amino acid kinase family LNQ24_003745 PF01472 PUA domain LNQ24_003750 PF00171 Aldehyde dehydrogenase family LNQ24_003755 PF07317 Flagellar regulator YcgR LNQ24_003755 PF07238 PilZ domain LNQ24_003780 PF00593 TonB dependent receptor LNQ24_003780 PF07715 TonB-dependent Receptor Plug Domain LNQ24_003785 PF01202 Shikimate kinase LNQ24_003805 PF07302 AroM protein LNQ24_003810 PF06865 Pyrimidine/purine nucleoside phosphorylase LNQ24_003815 PF04381 Putative exonuclease, RdgC LNQ24_003820 PF00480 ROK family LNQ24_003825 PF13476 AAA domain LNQ24_003830 PF00149 Calcineurin-like phosphoesterase LNQ24_003830 PF12320 Type 5 capsule protein repressor C-terminal domain LNQ24_003835 PF00072 Response regulator receiver domain LNQ24_003835 PF00486 Transcriptional regulatory protein, C terminal LNQ24_003840 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_003840 PF11808 Phosphate regulon sensor protein PhoR LNQ24_003840 PF00989 PAS fold LNQ24_003840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_003845 PF12849 PBP superfamily domain LNQ24_003850 PF05525 Branched-chain amino acid transport protein LNQ24_003855 PF00324 Amino acid permease LNQ24_003860 PF00128 Alpha amylase, catalytic domain LNQ24_003860 PF02903 Alpha amylase, N-terminal ig-like domain LNQ24_003870 PF10417 C-terminal domain of 1-Cys peroxiredoxin LNQ24_003870 PF00578 AhpC/TSA family LNQ24_003875 PF04336 Acyl carrier protein phosphodiesterase LNQ24_003880 PF02547 Queuosine biosynthesis protein LNQ24_003885 PF01702 Queuine tRNA-ribosyltransferase LNQ24_003890 PF02699 Preprotein translocase subunit LNQ24_003895 PF02355 Protein export membrane protein LNQ24_003895 PF13721 SecD export protein N-terminal TM region LNQ24_003895 PF07549 SecD/SecF GG Motif LNQ24_003900 PF02355 Protein export membrane protein LNQ24_003900 PF07549 SecD/SecF GG Motif LNQ24_003905 PF03477 ATP cone domain LNQ24_003910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ24_003910 PF01872 RibD C-terminal domain LNQ24_003915 PF00885 6,7-dimethyl-8-ribityllumazine synthase LNQ24_003920 PF01029 NusB family LNQ24_003925 PF00586 AIR synthase related protein, N-terminal domain LNQ24_003925 PF02769 AIR synthase related protein, C-terminal domain LNQ24_003930 PF04608 Phosphatidylglycerophosphatase A LNQ24_003935 PF02779 Transketolase, pyrimidine binding domain LNQ24_003935 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LNQ24_003935 PF02780 Transketolase, C-terminal domain LNQ24_003940 PF00348 Polyprenyl synthetase LNQ24_003945 PF02609 Exonuclease VII small subunit LNQ24_003950 PF02926 THUMP domain LNQ24_003950 PF02568 Thiamine biosynthesis protein (ThiI) LNQ24_003955 PF02954 Bacterial regulatory protein, Fis family LNQ24_003955 PF00072 Response regulator receiver domain LNQ24_003955 PF14532 Sigma-54 interaction domain LNQ24_003960 PF00672 HAMP domain LNQ24_003960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_003960 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_003970 PF07690 Major Facilitator Superfamily LNQ24_003975 PF01965 DJ-1/PfpI family LNQ24_003980 PF08546 Ketopantoate reductase PanE/ApbA C terminal LNQ24_003980 PF02558 Ketopantoate reductase PanE/ApbA LNQ24_003985 PF04461 Protein of unknown function (DUF520) LNQ24_003990 PF07690 Major Facilitator Superfamily LNQ24_003995 PF01040 UbiA prenyltransferase family LNQ24_004000 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LNQ24_004005 PF00510 Cytochrome c oxidase subunit III LNQ24_004010 PF00115 Cytochrome C and Quinol oxidase polypeptide I LNQ24_004015 PF06481 COX Aromatic Rich Motif LNQ24_004015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LNQ24_004020 PF03502 Nucleoside-specific channel-forming protein, Tsx LNQ24_004025 PF07690 Major Facilitator Superfamily LNQ24_004030 PF03923 Uncharacterized lipoprotein LNQ24_004030 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LNQ24_004035 PF01722 BolA-like protein LNQ24_004040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ24_004040 PF05698 Bacterial trigger factor protein (TF) C-terminus LNQ24_004040 PF05697 Bacterial trigger factor protein (TF) LNQ24_004045 PF00574 Clp protease LNQ24_004050 PF07724 AAA domain (Cdc48 subfamily) LNQ24_004050 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ24_004050 PF06689 ClpX C4-type zinc finger LNQ24_004055 PF02190 ATP-dependent protease La (LON) substrate-binding domain LNQ24_004055 PF05362 Lon protease (S16) C-terminal proteolytic domain LNQ24_004055 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_004060 PF00216 Bacterial DNA-binding protein LNQ24_004065 PF13145 PPIC-type PPIASE domain LNQ24_004080 PF06508 Queuosine biosynthesis protein QueC LNQ24_004085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_004085 PF12793 Sugar transport-related sRNA regulator N-term LNQ24_004100 PF01037 Lrp/AsnC ligand binding domain LNQ24_004100 PF13404 AsnC-type helix-turn-helix domain LNQ24_004105 PF00664 ABC transporter transmembrane region LNQ24_004105 PF00005 ABC transporter LNQ24_004110 PF00664 ABC transporter transmembrane region LNQ24_004110 PF00005 ABC transporter LNQ24_004115 PF00543 Nitrogen regulatory protein P-II LNQ24_004120 PF00909 Ammonium Transporter Family LNQ24_004130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNQ24_004140 PF05321 Haemolysin expression modulating protein LNQ24_004145 PF10757 Biofilm formation regulator YbaJ LNQ24_004155 PF00444 Ribosomal protein L36 LNQ24_004160 PF01197 Ribosomal protein L31 LNQ24_004165 PF00873 AcrB/AcrD/AcrF family LNQ24_004170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ24_004170 PF00529 HlyD membrane-fusion protein of T1SS LNQ24_004175 PF08361 MAATS-type transcriptional repressor, C-terminal region LNQ24_004175 PF00440 Bacterial regulatory proteins, tetR family LNQ24_004180 PF02635 DsrE/DsrF-like family LNQ24_004185 PF12794 Mechanosensitive ion channel inner membrane domain 1 LNQ24_004185 PF12795 Mechanosensitive ion channel porin domain LNQ24_004185 PF00924 Mechanosensitive ion channel LNQ24_004190 PF10689 Protein of unknown function (DUF2496) LNQ24_004200 PF04304 Protein of unknown function (DUF454) LNQ24_004205 PF00156 Phosphoribosyl transferase domain LNQ24_004210 PF01970 Tripartite tricarboxylate transporter TctA family LNQ24_004225 PF00486 Transcriptional regulatory protein, C terminal LNQ24_004225 PF00072 Response regulator receiver domain LNQ24_004230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_004230 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_004235 PF12169 DNA polymerase III subunits gamma and tau domain III LNQ24_004235 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LNQ24_004235 PF12170 DNA polymerase III tau subunit V interacting with alpha LNQ24_004240 PF02575 YbaB/EbfC DNA-binding family LNQ24_004245 PF02132 RecR protein LNQ24_004245 PF13662 Toprim domain LNQ24_004250 PF00183 Hsp90 protein LNQ24_004250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_004255 PF05191 Adenylate kinase, active site lid LNQ24_004260 PF00762 Ferrochelatase LNQ24_004265 PF02706 Chain length determinant protein LNQ24_004270 PF00294 pfkB family carbohydrate kinase LNQ24_004275 PF02254 TrkA-N domain LNQ24_004275 PF00999 Sodium/hydrogen exchanger family LNQ24_004280 PF02872 5'-nucleotidase, C-terminal domain LNQ24_004280 PF00149 Calcineurin-like phosphoesterase LNQ24_004285 PF04073 Aminoacyl-tRNA editing domain LNQ24_004290 PF01963 TraB family LNQ24_004295 PF00403 Heavy-metal-associated domain LNQ24_004300 PF13411 MerR HTH family regulatory protein LNQ24_004305 PF01957 NfeD-like C-terminal, partner-binding LNQ24_004310 PF01145 SPFH domain / Band 7 family LNQ24_004310 PF16200 C-terminal region of band_7 LNQ24_004315 PF00085 Thioredoxin LNQ24_004320 PF00106 short chain dehydrogenase LNQ24_004325 PF13472 GDSL-like Lipase/Acylhydrolase family LNQ24_004330 PF00005 ABC transporter LNQ24_004340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LNQ24_004340 PF02222 ATP-grasp domain LNQ24_004345 PF00731 AIR carboxylase LNQ24_004350 PF00149 Calcineurin-like phosphoesterase LNQ24_004355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNQ24_004360 PF01406 tRNA synthetases class I (C) catalytic domain LNQ24_004360 PF09190 DALR domain LNQ24_004375 PF00419 Fimbrial protein LNQ24_004380 PF13954 PapC N-terminal domain LNQ24_004380 PF00577 Outer membrane usher protein LNQ24_004380 PF13953 PapC C-terminal domain LNQ24_004385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_004385 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_004420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LNQ24_004420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LNQ24_004430 PF13356 Arm DNA-binding domain LNQ24_004430 PF14659 Phage integrase, N-terminal SAM-like domain LNQ24_004430 PF00589 Phage integrase family LNQ24_004480 PF01926 50S ribosome-binding GTPase LNQ24_004485 PF08220 DeoR-like helix-turn-helix domain LNQ24_004485 PF13280 WYL domain LNQ24_004505 PF01348 Type II intron maturase LNQ24_004505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LNQ24_004515 PF04002 RadC-like JAB domain LNQ24_004520 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LNQ24_004525 PF06755 CbtA_toxin of type IV toxin-antitoxin system LNQ24_004535 PF01022 Bacterial regulatory protein, arsR family LNQ24_004540 PF02040 Arsenical pump membrane protein LNQ24_004545 PF03960 ArsC family LNQ24_004555 PF00501 AMP-binding enzyme LNQ24_004580 PF01292 Prokaryotic cytochrome b561 LNQ24_004590 PF00343 Carbohydrate phosphorylase LNQ24_004600 PF00072 Response regulator receiver domain LNQ24_004600 PF00486 Transcriptional regulatory protein, C terminal LNQ24_004610 PF00483 Nucleotidyl transferase LNQ24_004620 PF00535 Glycosyl transferase family 2 LNQ24_004620 PF07238 PilZ domain LNQ24_004620 PF03552 Cellulose synthase LNQ24_004640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LNQ24_004640 PF02837 Glycosyl hydrolases family 2, sugar binding domain LNQ24_004640 PF00703 Glycosyl hydrolases family 2 LNQ24_004640 PF16355 Domain of unknown function (DUF4982) LNQ24_004645 PF00672 HAMP domain LNQ24_004645 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_004645 PF01627 Hpt domain LNQ24_004645 PF00072 Response regulator receiver domain LNQ24_004645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNQ24_004645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_004650 PF00072 Response regulator receiver domain LNQ24_004650 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_004655 PF00440 Bacterial regulatory proteins, tetR family LNQ24_004685 PF00196 Bacterial regulatory proteins, luxR family LNQ24_004690 PF00313 'Cold-shock' DNA-binding domain LNQ24_004695 PF00313 'Cold-shock' DNA-binding domain LNQ24_004700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LNQ24_004710 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_004710 PF05230 MASE2 domain LNQ24_004715 PF02416 mttA/Hcf106 family LNQ24_004720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LNQ24_004720 PF04055 Radical SAM superfamily LNQ24_004725 PF03099 Biotin/lipoate A/B protein ligase family LNQ24_004730 PF04359 Protein of unknown function (DUF493) LNQ24_004735 PF07943 Penicillin-binding protein 5, C-terminal domain LNQ24_004735 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ24_004740 PF03330 Lytic transglycolase LNQ24_004740 PF05036 Sporulation related domain LNQ24_004745 PF01098 Cell cycle protein LNQ24_004750 PF03717 Penicillin-binding Protein dimerisation domain LNQ24_004750 PF00905 Penicillin binding protein transpeptidase domain LNQ24_004755 PF02590 Predicted SPOUT methyltransferase LNQ24_004765 PF01467 Cytidylyltransferase-like LNQ24_004770 PF06144 DNA polymerase III, delta subunit LNQ24_004770 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LNQ24_004775 PF04390 Lipopolysaccharide-assembly LNQ24_004780 PF13603 Leucyl-tRNA synthetase, Domain 2 LNQ24_004780 PF08264 Anticodon-binding domain of tRNA LNQ24_004780 PF00133 tRNA synthetases class I (I, L, M and V) LNQ24_004785 PF07295 Zinc-ribbon containing domain LNQ24_004790 PF00005 ABC transporter LNQ24_004795 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_004800 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_004805 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_004810 PF00795 Carbon-nitrogen hydrolase LNQ24_004815 PF00571 CBS domain LNQ24_004815 PF03471 Transporter associated domain LNQ24_004820 PF02130 Uncharacterized protein family UPF0054 LNQ24_004825 PF02562 PhoH-like protein LNQ24_004830 PF04055 Radical SAM superfamily LNQ24_004830 PF01938 TRAM domain LNQ24_004830 PF00919 Uncharacterized protein family UPF0004 LNQ24_004835 PF01494 FAD binding domain LNQ24_004870 PF00733 Asparagine synthase LNQ24_004870 PF13537 Glutamine amidotransferase domain LNQ24_004875 PF13344 Haloacid dehalogenase-like hydrolase LNQ24_004880 PF01047 MarR family LNQ24_004880 PF00480 ROK family LNQ24_004885 PF01979 Amidohydrolase family LNQ24_004890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LNQ24_004895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LNQ24_004895 PF00367 phosphotransferase system, EIIB LNQ24_004895 PF02378 Phosphotransferase system, EIIC LNQ24_004900 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ24_004900 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LNQ24_004905 PF03573 outer membrane porin, OprD family LNQ24_004910 PF13982 YbfN-like lipoprotein LNQ24_004915 PF00728 Glycosyl hydrolase family 20, catalytic domain LNQ24_004915 PF03173 Putative carbohydrate binding domain LNQ24_004915 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LNQ24_004915 PF02838 Glycosyl hydrolase family 20, domain 2 LNQ24_004920 PF01475 Ferric uptake regulator family LNQ24_004925 PF00258 Flavodoxin LNQ24_004930 PF00672 HAMP domain LNQ24_004930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_004930 PF02203 Tar ligand binding domain homologue LNQ24_004935 PF01402 Ribbon-helix-helix protein, copG family LNQ24_004940 PF12697 Alpha/beta hydrolase family LNQ24_004945 PF03925 SeqA protein C-terminal domain LNQ24_004945 PF17206 SeqA protein N-terminal domain LNQ24_004950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNQ24_004950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNQ24_004950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNQ24_004950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNQ24_004960 PF00072 Response regulator receiver domain LNQ24_004960 PF00486 Transcriptional regulatory protein, C terminal LNQ24_004965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_004965 PF02702 Osmosensitive K+ channel His kinase sensor domain LNQ24_004965 PF13493 Domain of unknown function (DUF4118) LNQ24_004965 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_004965 PF13492 GAF domain LNQ24_004970 PF02669 K+-transporting ATPase, c chain LNQ24_004980 PF03814 Potassium-transporting ATPase A subunit LNQ24_004985 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) LNQ24_004990 PF10725 Protein of unknown function (DUF2517) LNQ24_004995 PF08349 Protein of unknown function (DUF1722) LNQ24_005000 PF00875 DNA photolyase LNQ24_005000 PF03441 FAD binding domain of DNA photolyase LNQ24_005005 PF02112 cAMP phosphodiesterases class-II LNQ24_005010 PF01784 NIF3 (NGG1p interacting factor 3) LNQ24_005015 PF02682 Carboxyltransferase domain, subdomain C and D LNQ24_005020 PF02626 Carboxyltransferase domain, subdomain A and B LNQ24_005025 PF03746 LamB/YcsF family LNQ24_005040 PF01470 Pyroglutamyl peptidase LNQ24_005050 PF00285 Citrate synthase, C-terminal domain LNQ24_005055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNQ24_005060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNQ24_005065 PF00890 FAD binding domain LNQ24_005065 PF02910 Fumarate reductase flavoprotein C-term LNQ24_005070 PF13085 2Fe-2S iron-sulfur cluster binding domain LNQ24_005075 PF02779 Transketolase, pyrimidine binding domain LNQ24_005075 PF16870 2-oxoglutarate dehydrogenase C-terminal LNQ24_005075 PF00676 Dehydrogenase E1 component LNQ24_005075 PF16078 2-oxoglutarate dehydrogenase N-terminus LNQ24_005080 PF02817 e3 binding domain LNQ24_005080 PF00364 Biotin-requiring enzyme LNQ24_005080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNQ24_005085 PF00549 CoA-ligase LNQ24_005085 PF08442 ATP-grasp domain LNQ24_005090 PF00549 CoA-ligase LNQ24_005090 PF02629 CoA binding domain LNQ24_005095 PF00149 Calcineurin-like phosphoesterase LNQ24_005095 PF02872 5'-nucleotidase, C-terminal domain LNQ24_005100 PF01654 Cytochrome bd terminal oxidase subunit I LNQ24_005105 PF02322 Cytochrome bd terminal oxidase subunit II LNQ24_005110 PF08173 Membrane bound YbgT-like protein LNQ24_005115 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LNQ24_005120 PF03061 Thioesterase superfamily LNQ24_005125 PF01618 MotA/TolQ/ExbB proton channel family LNQ24_005130 PF02472 Biopolymer transport protein ExbD/TolR LNQ24_005135 PF06519 TolA C-terminal LNQ24_005135 PF06519 TolA C-terminal LNQ24_005140 PF07676 WD40-like Beta Propeller Repeat LNQ24_005140 PF04052 TolB amino-terminal domain LNQ24_005145 PF00691 OmpA family LNQ24_005150 PF16331 TolA binding protein trimerisation LNQ24_005150 PF13174 Tetratricopeptide repeat LNQ24_005180 PF02445 Quinolinate synthetase A protein LNQ24_005185 PF04973 Nicotinamide mononucleotide transporter LNQ24_005190 PF00989 PAS fold LNQ24_005190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_005190 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_005190 PF01627 Hpt domain LNQ24_005190 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_005190 PF00072 Response regulator receiver domain LNQ24_005195 PF00196 Bacterial regulatory proteins, luxR family LNQ24_005195 PF00072 Response regulator receiver domain LNQ24_005200 PF00793 DAHP synthetase I family LNQ24_005205 PF00300 Histidine phosphatase superfamily (branch 1) LNQ24_005215 PF01263 Aldose 1-epimerase LNQ24_005220 PF10509 Galactokinase galactose-binding signature LNQ24_005220 PF08544 GHMP kinases C terminal LNQ24_005220 PF00288 GHMP kinases N terminal domain LNQ24_005225 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LNQ24_005225 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LNQ24_005230 PF16363 GDP-mannose 4,6 dehydratase LNQ24_005245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_005245 PF03459 TOBE domain LNQ24_005250 PF10766 Multidrug efflux pump-associated protein AcrZ LNQ24_005260 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005265 PF00005 ABC transporter LNQ24_005265 PF03459 TOBE domain LNQ24_005275 PF10282 Lactonase, 7-bladed beta-propeller LNQ24_005280 PF00202 Aminotransferase class-III LNQ24_005285 PF06968 Biotin and Thiamin Synthesis associated domain LNQ24_005285 PF04055 Radical SAM superfamily LNQ24_005290 PF00155 Aminotransferase class I and II LNQ24_005295 PF08241 Methyltransferase domain LNQ24_005305 PF00005 ABC transporter LNQ24_005310 PF00271 Helicase conserved C-terminal domain LNQ24_005310 PF04851 Type III restriction enzyme, res subunit LNQ24_005310 PF02151 UvrB/uvrC motif LNQ24_005310 PF12344 Ultra-violet resistance protein B LNQ24_005310 PF17757 UvrB interaction domain LNQ24_005315 PF09905 DNA-binding protein VF530 LNQ24_005330 PF01032 FecCD transport family LNQ24_005335 PF00005 ABC transporter LNQ24_005340 PF01933 Uncharacterised protein family UPF0052 LNQ24_005345 PF06463 Molybdenum Cofactor Synthesis C LNQ24_005345 PF04055 Radical SAM superfamily LNQ24_005350 PF01967 MoaC family LNQ24_005355 PF02597 ThiS family LNQ24_005360 PF02391 MoaE protein LNQ24_005365 PF01027 Inhibitor of apoptosis-promoting Bax1 LNQ24_005380 PF00005 ABC transporter LNQ24_005385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ24_005390 PF09209 Tetracyclin repressor-like, C-terminal domain LNQ24_005390 PF00440 Bacterial regulatory proteins, tetR family LNQ24_005395 PF00270 DEAD/DEAH box helicase LNQ24_005395 PF00271 Helicase conserved C-terminal domain LNQ24_005400 PF01207 Dihydrouridine synthase (Dus) LNQ24_005410 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ24_005415 PF01565 FAD binding domain LNQ24_005415 PF09330 D-lactate dehydrogenase, membrane binding LNQ24_005420 PF01928 CYTH domain LNQ24_005425 PF01844 HNH endonuclease LNQ24_005435 PF04226 Transglycosylase associated protein LNQ24_005440 PF00005 ABC transporter LNQ24_005450 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005455 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005460 PF07308 Protein of unknown function (DUF1456) LNQ24_005465 PF00581 Rhodanese-like domain LNQ24_005470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LNQ24_005475 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005480 PF00005 ABC transporter LNQ24_005485 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005490 PF13520 Amino acid permease LNQ24_005495 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ24_005495 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ24_005495 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ24_005505 PF00892 EamA-like transporter family LNQ24_005510 PF00267 Gram-negative porin LNQ24_005515 PF06733 DEAD_2 LNQ24_005515 PF13307 Helicase C-terminal domain LNQ24_005520 PF02885 Glycosyl transferase family, helical bundle domain LNQ24_005525 PF05971 RNA methyltransferase LNQ24_005530 PF00005 ABC transporter LNQ24_005535 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005540 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_005545 PF00210 Ferritin-like domain LNQ24_005550 PF13649 Methyltransferase domain LNQ24_005555 PF00892 EamA-like transporter family LNQ24_005560 PF13505 Outer membrane protein beta-barrel domain LNQ24_005565 PF01769 Divalent cation transporter LNQ24_005565 PF03448 MgtE intracellular N domain LNQ24_005565 PF00571 CBS domain LNQ24_005570 PF01545 Cation efflux family LNQ24_005570 PF16916 Dimerisation domain of Zinc Transporter LNQ24_005575 PF00005 ABC transporter LNQ24_005575 PF12848 ABC transporter LNQ24_005580 PF00899 ThiF family LNQ24_005585 PF00994 Probable molybdopterin binding domain LNQ24_005585 PF03453 MoeA N-terminal region (domain I and II) LNQ24_005585 PF03454 MoeA C-terminal region (domain IV) LNQ24_005595 PF00756 Putative esterase LNQ24_005600 PF08240 Alcohol dehydrogenase GroES-like domain LNQ24_005600 PF00107 Zinc-binding dehydrogenase LNQ24_005605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_005605 PF03466 LysR substrate binding domain LNQ24_005610 PF06779 Uncharacterised MFS-type transporter YbfB LNQ24_005615 PF01227 GTP cyclohydrolase I LNQ24_005620 PF04235 Protein of unknown function (DUF418) LNQ24_005625 PF00356 Bacterial regulatory proteins, lacI family LNQ24_005630 PF13407 Periplasmic binding protein domain LNQ24_005635 PF00005 ABC transporter LNQ24_005640 PF02653 Branched-chain amino acid transport system / permease component LNQ24_005645 PF02698 DUF218 domain LNQ24_005650 PF03949 Malic enzyme, NAD binding domain LNQ24_005650 PF00390 Malic enzyme, N-terminal domain LNQ24_005660 PF03466 LysR substrate binding domain LNQ24_005660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_005665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ24_005665 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ24_005670 PF04172 LrgB-like family LNQ24_005675 PF03788 LrgA family LNQ24_005685 PF01588 Putative tRNA binding domain LNQ24_005685 PF09334 tRNA synthetases class I (M) LNQ24_005690 PF10609 NUBPL iron-transfer P-loop NTPase LNQ24_005695 PF00485 Phosphoribulokinase / Uridine kinase family LNQ24_005700 PF00692 dUTPase LNQ24_005705 PF05170 AsmA family LNQ24_005710 PF03606 C4-dicarboxylate anaerobic carrier LNQ24_005715 PF03741 Integral membrane protein TerC family LNQ24_005715 PF00571 CBS domain LNQ24_005715 PF03471 Transporter associated domain LNQ24_005720 PF00483 Nucleotidyl transferase LNQ24_005725 PF00483 Nucleotidyl transferase LNQ24_005730 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LNQ24_005730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LNQ24_005740 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LNQ24_005740 PF01502 Phosphoribosyl-AMP cyclohydrolase LNQ24_005745 PF00977 Histidine biosynthesis protein LNQ24_005750 PF00977 Histidine biosynthesis protein LNQ24_005755 PF00117 Glutamine amidotransferase class-I LNQ24_005760 PF00475 Imidazoleglycerol-phosphate dehydratase LNQ24_005765 PF00155 Aminotransferase class I and II LNQ24_005770 PF00815 Histidinol dehydrogenase LNQ24_005775 PF01634 ATP phosphoribosyltransferase LNQ24_005775 PF08029 HisG, C-terminal domain LNQ24_005785 PF01370 NAD dependent epimerase/dehydratase family LNQ24_005790 PF00043 Glutathione S-transferase, C-terminal domain LNQ24_005790 PF13417 Glutathione S-transferase, N-terminal domain LNQ24_005805 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ24_005810 PF00571 CBS domain LNQ24_005810 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_005815 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ24_005815 PF07943 Penicillin-binding protein 5, C-terminal domain LNQ24_005820 PF03313 Serine dehydratase alpha chain LNQ24_005820 PF03315 Serine dehydratase beta chain LNQ24_005830 PF00455 DeoR C terminal sensor domain LNQ24_005830 PF08220 DeoR-like helix-turn-helix domain LNQ24_005835 PF01791 DeoC/LacD family aldolase LNQ24_005840 PF01569 PAP2 superfamily LNQ24_005850 PF00589 Phage integrase family LNQ24_005850 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_005865 PF07022 Bacteriophage CI repressor helix-turn-helix domain LNQ24_005865 PF16452 Bacteriophage CI repressor C-terminal domain LNQ24_005875 PF06892 Phage regulatory protein CII (CP76) LNQ24_005895 PF02080 TrkA-C domain LNQ24_005895 PF06826 Predicted Permease Membrane Region LNQ24_005900 PF00462 Glutaredoxin LNQ24_005905 PF07214 Protein of unknown function (DUF1418) LNQ24_005910 PF10722 Putative bacterial sensory transduction regulator LNQ24_005915 PF13416 Bacterial extracellular solute-binding protein LNQ24_005920 PF08402 TOBE domain LNQ24_005920 PF00005 ABC transporter LNQ24_005925 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005930 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005935 PF10767 Protein of unknown function (DUF2593) LNQ24_005940 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ24_005945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_005950 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005955 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_005960 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_005965 PF00005 ABC transporter LNQ24_005970 PF12883 Protein of unknown function (DUF3828) LNQ24_005975 PF01906 Putative heavy-metal-binding LNQ24_005980 PF01370 NAD dependent epimerase/dehydratase family LNQ24_005985 PF11066 Protein of unknown function (DUF2867) LNQ24_005985 PF13460 NAD(P)H-binding LNQ24_005990 PF01212 Beta-eliminating lyase LNQ24_005995 PF00970 Oxidoreductase FAD-binding domain LNQ24_005995 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ24_005995 PF00175 Oxidoreductase NAD-binding domain LNQ24_006000 PF03063 Prismane/CO dehydrogenase family LNQ24_006005 PF03956 Lysine exporter LysO LNQ24_006010 PF11398 Protein of unknown function (DUF2813) LNQ24_006015 PF04393 Protein of unknown function (DUF535) LNQ24_006020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ24_006025 PF02687 FtsX-like permease family LNQ24_006025 PF12704 MacB-like periplasmic core domain LNQ24_006025 PF00005 ABC transporter LNQ24_006030 PF00313 'Cold-shock' DNA-binding domain LNQ24_006035 PF02617 ATP-dependent Clp protease adaptor protein ClpS LNQ24_006040 PF02861 Clp amino terminal domain, pathogenicity island component LNQ24_006040 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ24_006040 PF07724 AAA domain (Cdc48 subfamily) LNQ24_006040 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_006040 PF17871 AAA lid domain LNQ24_006045 PF01176 Translation initiation factor 1A / IF-1 LNQ24_006050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LNQ24_006055 PF00664 ABC transporter transmembrane region LNQ24_006055 PF00005 ABC transporter LNQ24_006060 PF00664 ABC transporter transmembrane region LNQ24_006060 PF00005 ABC transporter LNQ24_006065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_006070 PF01037 Lrp/AsnC ligand binding domain LNQ24_006075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LNQ24_006075 PF17854 FtsK alpha domain LNQ24_006075 PF09397 Ftsk gamma domain LNQ24_006075 PF01580 FtsK/SpoIIIE family LNQ24_006080 PF03548 Outer membrane lipoprotein carrier protein LolA LNQ24_006085 PF12002 MgsA AAA+ ATPase C terminal LNQ24_006085 PF16193 AAA C-terminal domain LNQ24_006085 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_006090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ24_006090 PF02403 Seryl-tRNA synthetase N-terminal domain LNQ24_006095 PF07690 Major Facilitator Superfamily LNQ24_006100 PF04055 Radical SAM superfamily LNQ24_006105 PF02901 Pyruvate formate lyase-like LNQ24_006105 PF01228 Glycine radical LNQ24_006110 PF01226 Formate/nitrite transporter LNQ24_006115 PF18381 YcaO cyclodehydratase C-terminal domain LNQ24_006115 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LNQ24_006120 PF17763 Glutaminase/Asparaginase C-terminal domain LNQ24_006120 PF00710 Asparaginase, N-terminal LNQ24_006125 PF00266 Aminotransferase class-V LNQ24_006130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNQ24_006135 PF02224 Cytidylate kinase LNQ24_006140 PF00575 S1 RNA binding domain LNQ24_006145 PF00216 Bacterial DNA-binding protein LNQ24_006150 PF03772 Competence protein LNQ24_006150 PF00753 Metallo-beta-lactamase superfamily LNQ24_006155 PF00005 ABC transporter LNQ24_006155 PF00664 ABC transporter transmembrane region LNQ24_006160 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LNQ24_006165 PF07063 Domain of unknown function (DUF1338) LNQ24_006170 PF00313 'Cold-shock' DNA-binding domain LNQ24_006175 PF00313 'Cold-shock' DNA-binding domain LNQ24_006180 PF03966 Trm112p-like protein LNQ24_006185 PF02348 Cytidylyltransferase LNQ24_006190 PF01636 Phosphotransferase enzyme family LNQ24_006195 PF02698 DUF218 domain LNQ24_006200 PF13847 Methyltransferase domain LNQ24_006205 PF03882 MukF winged-helix domain LNQ24_006205 PF17193 MukF C-terminal domain LNQ24_006205 PF17192 MukF middle domain LNQ24_006210 PF04288 MukE-like family LNQ24_006215 PF04310 MukB N-terminal LNQ24_006215 PF16330 MukB hinge domain LNQ24_006220 PF01471 Putative peptidoglycan binding domain LNQ24_006220 PF03734 L,D-transpeptidase catalytic domain LNQ24_006225 PF05951 Bacterial protein of unknown function (DUF882) LNQ24_006230 PF00753 Metallo-beta-lactamase superfamily LNQ24_006235 PF00155 Aminotransferase class I and II LNQ24_006240 PF00267 Gram-negative porin LNQ24_006245 PF00152 tRNA synthetases class II (D, K and N) LNQ24_006245 PF01336 OB-fold nucleic acid binding domain LNQ24_006250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LNQ24_006250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LNQ24_006255 PF01433 Peptidase family M1 domain LNQ24_006255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LNQ24_006255 PF11940 Domain of unknown function (DUF3458) Ig-like fold LNQ24_006260 PF01180 Dihydroorotate dehydrogenase LNQ24_006265 PF07126 Cell-division protein ZapC LNQ24_006270 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ24_006270 PF03473 MOSC domain LNQ24_006270 PF03476 MOSC N-terminal beta barrel domain LNQ24_006275 PF10672 S-adenosylmethionine-dependent methyltransferase LNQ24_006275 PF02926 THUMP domain LNQ24_006275 PF01170 Putative RNA methylase family UPF0020 LNQ24_006280 PF00005 ABC transporter LNQ24_006280 PF12848 ABC transporter LNQ24_006280 PF16326 ABC transporter C-terminal domain LNQ24_006285 PF04403 Paraquat-inducible protein A LNQ24_006290 PF02470 MlaD protein LNQ24_006295 PF03886 ABC-type transport auxiliary lipoprotein component LNQ24_006300 PF04957 Ribosome modulation factor LNQ24_006305 PF07977 FabA-like domain LNQ24_006310 PF13654 AAA domain LNQ24_006310 PF05362 Lon protease (S16) C-terminal proteolytic domain LNQ24_006315 PF06303 MatP N-terminal domain LNQ24_006315 PF17414 MatP C-terminal ribbon-helix-helix domain LNQ24_006320 PF00691 OmpA family LNQ24_006320 PF01389 OmpA-like transmembrane domain LNQ24_006325 PF03846 Cell division inhibitor SulA LNQ24_006330 PF04994 TfoX C-terminal domain LNQ24_006330 PF04993 TfoX N-terminal domain LNQ24_006335 PF12805 FUSC-like inner membrane protein yccS LNQ24_006340 PF03733 Inner membrane component domain LNQ24_006345 PF12462 DNA helicase IV / RNA helicase N terminal LNQ24_006345 PF00580 UvrD/REP helicase N-terminal domain LNQ24_006345 PF13361 UvrD-like helicase C-terminal domain LNQ24_006350 PF02142 MGS-like domain LNQ24_006355 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LNQ24_006360 PF13380 CoA binding domain LNQ24_006365 PF08755 Hemimethylated DNA-binding protein YccV like LNQ24_006370 PF10672 S-adenosylmethionine-dependent methyltransferase LNQ24_006370 PF17785 PUA-like domain LNQ24_006375 PF00708 Acylphosphatase LNQ24_006380 PF04358 DsrC like protein LNQ24_006390 PF00484 Carbonic anhydrase LNQ24_006395 PF03471 Transporter associated domain LNQ24_006395 PF00999 Sodium/hydrogen exchanger family LNQ24_006395 PF02080 TrkA-C domain LNQ24_006405 PF01757 Acyltransferase family LNQ24_006410 PF04349 Periplasmic glucan biosynthesis protein, MdoG LNQ24_006415 PF00535 Glycosyl transferase family 2 LNQ24_006425 PF00854 POT family LNQ24_006435 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ24_006440 PF00581 Rhodanese-like domain LNQ24_006440 PF12368 Rhodanase C-terminal LNQ24_006440 PF17773 UPF0176 acylphosphatase like domain LNQ24_006445 PF01594 AI-2E family transporter LNQ24_006450 PF00196 Bacterial regulatory proteins, luxR family LNQ24_006455 PF01266 FAD dependent oxidoreductase LNQ24_006460 PF13991 BssS protein family LNQ24_006465 PF06183 DinI-like family LNQ24_006470 PF01979 Amidohydrolase family LNQ24_006475 PF03992 Antibiotic biosynthesis monooxygenase LNQ24_006485 PF12111 Polyribonucleotide phosphorylase C terminal LNQ24_006485 PF10150 Ribonuclease E/G family LNQ24_006485 PF00575 S1 RNA binding domain LNQ24_006490 PF00849 RNA pseudouridylate synthase LNQ24_006490 PF01479 S4 domain LNQ24_006495 PF02545 Maf-like protein LNQ24_006500 PF02620 Large ribosomal RNA subunit accumulation protein YceD LNQ24_006505 PF01783 Ribosomal L32p protein family LNQ24_006510 PF02504 Fatty acid synthesis protein LNQ24_006515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LNQ24_006515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LNQ24_006520 PF00698 Acyl transferase domain LNQ24_006530 PF00550 Phosphopantetheine attachment site LNQ24_006535 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ24_006535 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ24_006540 PF01063 Amino-transferase class IV LNQ24_006545 PF02618 YceG-like family LNQ24_006550 PF02223 Thymidylate kinase LNQ24_006555 PF09115 DNA polymerase III, delta subunit, C terminal LNQ24_006560 PF01026 TatD related DNase LNQ24_006565 PF00367 phosphotransferase system, EIIB LNQ24_006565 PF02378 Phosphotransferase system, EIIC LNQ24_006570 PF01230 HIT domain LNQ24_006575 PF07233 Protein of unknown function (DUF1425) LNQ24_006580 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LNQ24_006580 PF13036 Peptidoglycan-synthase activator LpoB LNQ24_006585 PF01636 Phosphotransferase enzyme family LNQ24_006590 PF00933 Glycosyl hydrolase family 3 N terminal domain LNQ24_006595 PF05728 Uncharacterised protein family (UPF0227) LNQ24_006600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_006605 PF05433 Glycine zipper 2TM domain LNQ24_006610 PF02559 CarD-like/TRCF domain LNQ24_006610 PF00270 DEAD/DEAH box helicase LNQ24_006610 PF00271 Helicase conserved C-terminal domain LNQ24_006610 PF03461 TRCF domain LNQ24_006610 PF17757 UvrB interaction domain LNQ24_006615 PF12704 MacB-like periplasmic core domain LNQ24_006615 PF02687 FtsX-like permease family LNQ24_006620 PF00005 ABC transporter LNQ24_006625 PF02687 FtsX-like permease family LNQ24_006625 PF12704 MacB-like periplasmic core domain LNQ24_006630 PF00480 ROK family LNQ24_006635 PF02146 Sir2 family LNQ24_006640 PF07687 Peptidase dimerisation domain LNQ24_006640 PF01546 Peptidase family M20/M25/M40 LNQ24_006645 PF08007 Cupin superfamily protein LNQ24_006650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_006650 PF08918 PhoQ Sensor LNQ24_006655 PF00486 Transcriptional regulatory protein, C terminal LNQ24_006655 PF00072 Response regulator receiver domain LNQ24_006665 PF08328 Adenylosuccinate lyase C-terminal LNQ24_006665 PF00206 Lyase LNQ24_006670 PF04356 Protein of unknown function (DUF489) LNQ24_006680 PF00293 NUDIX domain LNQ24_006685 PF00849 RNA pseudouridylate synthase LNQ24_006690 PF00180 Isocitrate/isopropylmalate dehydrogenase LNQ24_006695 PF03472 Autoinducer binding domain LNQ24_006695 PF00196 Bacterial regulatory proteins, luxR family LNQ24_006700 PF00765 Autoinducer synthase LNQ24_006705 PF00232 Glycosyl hydrolase family 1 LNQ24_006715 PF01432 Peptidase family M3 LNQ24_006720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_006720 PF00672 HAMP domain LNQ24_006720 PF02203 Tar ligand binding domain homologue LNQ24_006725 PF03390 2-hydroxycarboxylate transporter family LNQ24_006730 PF00072 Response regulator receiver domain LNQ24_006735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_006735 PF00989 PAS fold LNQ24_006735 PF17203 Single cache domain 3 LNQ24_006735 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LNQ24_006740 PF00939 Sodium:sulfate symporter transmembrane region LNQ24_006745 PF00413 Matrixin LNQ24_006745 PF08548 Peptidase M10 serralysin C terminal LNQ24_006745 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LNQ24_006750 PF02974 Protease inhibitor Inh LNQ24_006755 PF00664 ABC transporter transmembrane region LNQ24_006755 PF00005 ABC transporter LNQ24_006760 PF00529 HlyD membrane-fusion protein of T1SS LNQ24_006765 PF02321 Outer membrane efflux protein LNQ24_006780 PF12833 Helix-turn-helix domain LNQ24_006780 PF02311 AraC-like ligand binding domain LNQ24_006785 PF02562 PhoH-like protein LNQ24_006790 PF01699 Sodium/calcium exchanger protein LNQ24_006795 PF04954 Siderophore-interacting protein LNQ24_006795 PF08021 Siderophore-interacting FAD-binding domain LNQ24_006800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_006800 PF07730 Histidine kinase LNQ24_006800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LNQ24_006800 PF00672 HAMP domain LNQ24_006810 PF02322 Cytochrome bd terminal oxidase subunit II LNQ24_006815 PF01654 Cytochrome bd terminal oxidase subunit I LNQ24_006820 PF00392 Bacterial regulatory proteins, gntR family LNQ24_006820 PF00155 Aminotransferase class I and II LNQ24_006825 PF00202 Aminotransferase class-III LNQ24_006830 PF04958 Arginine N-succinyltransferase beta subunit LNQ24_006835 PF00171 Aldehyde dehydrogenase family LNQ24_006840 PF04996 Succinylarginine dihydrolase LNQ24_006850 PF00267 Gram-negative porin LNQ24_006860 PF01979 Amidohydrolase family LNQ24_006865 PF00392 Bacterial regulatory proteins, gntR family LNQ24_006865 PF07702 UTRA domain LNQ24_006870 PF01979 Amidohydrolase family LNQ24_006875 PF05962 HutD LNQ24_006880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_006880 PF03466 LysR substrate binding domain LNQ24_006890 PF03824 High-affinity nickel-transport protein LNQ24_006895 PF01300 Telomere recombination LNQ24_006895 PF07503 HypF finger LNQ24_006895 PF00708 Acylphosphatase LNQ24_006895 PF17788 HypF Kae1-like domain LNQ24_006900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ24_006900 PF00384 Molybdopterin oxidoreductase LNQ24_006900 PF01568 Molydopterin dinucleotide binding domain LNQ24_006905 PF12800 4Fe-4S binding domain LNQ24_006905 PF13247 4Fe-4S dicluster domain LNQ24_006910 PF01750 Hydrogenase maturation protease LNQ24_006915 PF07450 Formate hydrogenlyase maturation protein HycH LNQ24_006920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LNQ24_006925 PF12838 4Fe-4S dicluster domain LNQ24_006930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LNQ24_006930 PF00374 Nickel-dependent hydrogenase LNQ24_006930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LNQ24_006935 PF00146 NADH dehydrogenase LNQ24_006940 PF00361 Proton-conducting membrane transporter LNQ24_006945 PF13247 4Fe-4S dicluster domain LNQ24_006950 PF11046 Transcriptional repressor of hyc and hyp operons LNQ24_006955 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LNQ24_006960 PF02492 CobW/HypB/UreG, nucleotide-binding domain LNQ24_006965 PF01455 HupF/HypC family LNQ24_006970 PF01924 Hydrogenase formation hypA family LNQ24_006975 PF02769 AIR synthase related protein, C-terminal domain LNQ24_006975 PF00586 AIR synthase related protein, N-terminal domain LNQ24_006980 PF01590 GAF domain LNQ24_006980 PF02954 Bacterial regulatory protein, Fis family LNQ24_006980 PF00158 Sigma-54 interaction domain LNQ24_006990 PF13954 PapC N-terminal domain LNQ24_006990 PF00577 Outer membrane usher protein LNQ24_006995 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_006995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_007010 PF12833 Helix-turn-helix domain LNQ24_007015 PF01926 50S ribosome-binding GTPase LNQ24_007015 PF06071 Protein of unknown function (DUF933) LNQ24_007025 PF01195 Peptidyl-tRNA hydrolase LNQ24_007030 PF10762 Protein of unknown function (DUF2583) LNQ24_007035 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LNQ24_007035 PF14572 Phosphoribosyl synthetase-associated domain LNQ24_007040 PF08544 GHMP kinases C terminal LNQ24_007040 PF00288 GHMP kinases N terminal domain LNQ24_007045 PF03550 Outer membrane lipoprotein LolB LNQ24_007050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LNQ24_007050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LNQ24_007050 PF01488 Shikimate / quinate 5-dehydrogenase LNQ24_007055 PF03462 PCRF domain LNQ24_007055 PF00472 RF-1 domain LNQ24_007060 PF13847 Methyltransferase domain LNQ24_007060 PF17827 PrmC N-terminal domain LNQ24_007065 PF04247 Invasion gene expression up-regulator, SirB LNQ24_007070 PF13369 Transglutaminase-like superfamily LNQ24_007075 PF00793 DAHP synthetase I family LNQ24_007080 PF01740 STAS domain LNQ24_007080 PF00916 Sulfate permease family LNQ24_007085 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_007095 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ24_007105 PF00854 POT family LNQ24_007110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ24_007115 PF02811 PHP domain LNQ24_007120 PF02613 Nitrate reductase delta subunit LNQ24_007125 PF07273 Protein of unknown function (DUF1439) LNQ24_007135 PF07690 Major Facilitator Superfamily LNQ24_007140 PF13302 Acetyltransferase (GNAT) domain LNQ24_007145 PF04337 Protein of unknown function, DUF480 LNQ24_007150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ24_007155 PF03023 Lipid II flippase MurJ LNQ24_007160 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ24_007160 PF17287 POTRA domain LNQ24_007160 PF08479 POTRA domain, ShlB-type LNQ24_007165 PF05860 haemagglutination activity domain LNQ24_007165 PF13332 Hemagglutinin repeat LNQ24_007175 PF03485 Arginyl tRNA synthetase N terminal domain LNQ24_007175 PF05746 DALR anticodon binding domain LNQ24_007175 PF00750 tRNA synthetases class I (R) LNQ24_007180 PF06185 YecM protein LNQ24_007185 PF03932 CutC family LNQ24_007190 PF08003 Protein of unknown function (DUF1698) LNQ24_007195 PF13649 Methyltransferase domain LNQ24_007200 PF01124 MAPEG family LNQ24_007205 PF01904 Protein of unknown function DUF72 LNQ24_007215 PF02938 GAD domain LNQ24_007215 PF00152 tRNA synthetases class II (D, K and N) LNQ24_007215 PF01336 OB-fold nucleic acid binding domain LNQ24_007220 PF00293 NUDIX domain LNQ24_007225 PF01709 Transcriptional regulator LNQ24_007230 PF02075 Crossover junction endodeoxyribonuclease RuvC LNQ24_007235 PF07499 RuvA, C-terminal domain LNQ24_007235 PF01330 RuvA N terminal domain LNQ24_007240 PF17864 RuvB AAA lid domain LNQ24_007240 PF05491 RuvB C-terminal winged helix domain LNQ24_007240 PF05496 Holliday junction DNA helicase RuvB P-loop domain LNQ24_007245 PF00854 POT family LNQ24_007250 PF00950 ABC 3 transport family LNQ24_007255 PF00005 ABC transporter LNQ24_007260 PF01297 Zinc-uptake complex component A periplasmic LNQ24_007265 PF01551 Peptidase family M23 LNQ24_007265 PF08525 Opacity-associated protein A N-terminal motif LNQ24_007265 PF01476 LysM domain LNQ24_007270 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ24_007275 PF00224 Pyruvate kinase, barrel domain LNQ24_007275 PF02887 Pyruvate kinase, alpha/beta domain LNQ24_007280 PF01418 Helix-turn-helix domain, rpiR family LNQ24_007280 PF01380 SIS domain LNQ24_007285 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LNQ24_007285 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LNQ24_007290 PF01081 KDPG and KHG aldolase LNQ24_007295 PF00893 Small Multidrug Resistance protein LNQ24_007300 PF00893 Small Multidrug Resistance protein LNQ24_007305 PF01042 Endoribonuclease L-PSP LNQ24_007310 PF04851 Type III restriction enzyme, res subunit LNQ24_007310 PF13307 Helicase C-terminal domain LNQ24_007315 PF00814 Glycoprotease family LNQ24_007320 PF03843 Outer membrane lipoprotein Slp family LNQ24_007325 PF00501 AMP-binding enzyme LNQ24_007325 PF13193 AMP-binding enzyme C-terminal domain LNQ24_007330 PF01612 3'-5' exonuclease LNQ24_007330 PF00570 HRDC domain LNQ24_007335 PF03776 Septum formation topological specificity factor MinE LNQ24_007340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LNQ24_007345 PF05209 Septum formation inhibitor MinC, N-terminal domain LNQ24_007345 PF03775 Septum formation inhibitor MinC, C-terminal domain LNQ24_007350 PF05166 YcgL domain LNQ24_007355 PF01557 Fumarylacetoacetate (FAA) hydrolase family LNQ24_007360 PF03692 Putative zinc- or iron-chelating domain LNQ24_007375 PF02600 Disulfide bond formation protein DsbB LNQ24_007380 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LNQ24_007385 PF00392 Bacterial regulatory proteins, gntR family LNQ24_007385 PF07840 FadR C-terminal domain LNQ24_007390 PF04293 SpoVR like protein LNQ24_007395 PF01266 FAD dependent oxidoreductase LNQ24_007400 PF00842 Alanine racemase, C-terminal domain LNQ24_007400 PF01168 Alanine racemase, N-terminal domain LNQ24_007405 PF07690 Major Facilitator Superfamily LNQ24_007415 PF00563 EAL domain LNQ24_007415 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_007415 PF13426 PAS domain LNQ24_007420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_007420 PF03466 LysR substrate binding domain LNQ24_007425 PF03306 Alpha-acetolactate decarboxylase LNQ24_007430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ24_007430 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ24_007430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ24_007435 PF04285 Protein of unknown function (DUF444) LNQ24_007440 PF08298 PrkA AAA domain LNQ24_007440 PF06798 PrkA serine protein kinase C-terminal domain LNQ24_007445 PF06629 MltA-interacting protein MipA LNQ24_007450 PF00884 Sulfatase LNQ24_007455 PF01263 Aldose 1-epimerase LNQ24_007460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LNQ24_007460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LNQ24_007465 PF01641 SelR domain LNQ24_007470 PF07023 Protein of unknown function (DUF1315) LNQ24_007475 PF00857 Isochorismatase family LNQ24_007480 PF00710 Asparaginase, N-terminal LNQ24_007480 PF17763 Glutaminase/Asparaginase C-terminal domain LNQ24_007485 PF01343 Peptidase family S49 LNQ24_007490 PF00881 Nitroreductase family LNQ24_007495 PF00586 AIR synthase related protein, N-terminal domain LNQ24_007495 PF02769 AIR synthase related protein, C-terminal domain LNQ24_007500 PF01131 DNA topoisomerase LNQ24_007500 PF01751 Toprim domain LNQ24_007505 PF07383 Protein of unknown function (DUF1496) LNQ24_007510 PF00293 NUDIX domain LNQ24_007515 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ24_007545 PF01842 ACT domain LNQ24_007545 PF00551 Formyl transferase LNQ24_007550 PF02810 SEC-C motif LNQ24_007555 PF01734 Patatin-like phospholipase LNQ24_007560 PF00072 Response regulator receiver domain LNQ24_007565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNQ24_007565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNQ24_007565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNQ24_007570 PF00816 H-NS histone family LNQ24_007575 PF00265 Thymidine kinase LNQ24_007580 PF00171 Aldehyde dehydrogenase family LNQ24_007580 PF00465 Iron-containing alcohol dehydrogenase LNQ24_007585 PF01914 MarC family integral membrane protein LNQ24_007590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_007595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_007600 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_007605 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_007605 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ24_007610 PF00005 ABC transporter LNQ24_007610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_007615 PF00005 ABC transporter LNQ24_007615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_007620 PF04269 Protein of unknown function, DUF440 LNQ24_007625 PF13396 Phospholipase_D-nuclease N-terminal LNQ24_007625 PF13091 PLD-like domain LNQ24_007645 PF03795 YCII-related domain LNQ24_007660 PF00486 Transcriptional regulatory protein, C terminal LNQ24_007670 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_007670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_007675 PF13953 PapC C-terminal domain LNQ24_007675 PF13954 PapC N-terminal domain LNQ24_007675 PF00577 Outer membrane usher protein LNQ24_007695 PF03544 Gram-negative bacterial TonB protein C-terminal LNQ24_007700 PF03061 Thioesterase superfamily LNQ24_007705 PF04279 Intracellular septation protein A LNQ24_007710 PF01740 STAS domain LNQ24_007710 PF00916 Sulfate permease family LNQ24_007720 PF03692 Putative zinc- or iron-chelating domain LNQ24_007725 PF03922 OmpW family LNQ24_007735 PF00290 Tryptophan synthase alpha chain LNQ24_007740 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_007745 PF00218 Indole-3-glycerol phosphate synthase LNQ24_007745 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LNQ24_007750 PF02885 Glycosyl transferase family, helical bundle domain LNQ24_007750 PF00591 Glycosyl transferase family, a/b domain LNQ24_007755 PF00117 Glutamine amidotransferase class-I LNQ24_007760 PF04715 Anthranilate synthase component I, N terminal region LNQ24_007760 PF00425 chorismate binding enzyme LNQ24_007765 PF02811 PHP domain LNQ24_007770 PF01300 Telomere recombination LNQ24_007775 PF01479 S4 domain LNQ24_007775 PF00849 RNA pseudouridylate synthase LNQ24_007780 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LNQ24_007785 PF00106 short chain dehydrogenase LNQ24_007790 PF08496 Peptidase family S49 N-terminal LNQ24_007790 PF01343 Peptidase family S49 LNQ24_007795 PF10692 Protein of unknown function (DUF2498) LNQ24_007800 PF08272 Topoisomerase I zinc-ribbon-like LNQ24_007800 PF01131 DNA topoisomerase LNQ24_007800 PF01751 Toprim domain LNQ24_007800 PF01396 Topoisomerase DNA binding C4 zinc finger LNQ24_007805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_007805 PF03466 LysR substrate binding domain LNQ24_007825 PF00694 Aconitase C-terminal domain LNQ24_007825 PF00330 Aconitase family (aconitate hydratase) LNQ24_007830 PF00925 GTP cyclohydrolase II LNQ24_007835 PF01569 PAP2 superfamily LNQ24_007840 PF06305 Lipopolysaccharide assembly protein A domain LNQ24_007845 PF18073 Rubredoxin metal binding domain LNQ24_007855 PF07338 Protein of unknown function (DUF1471) LNQ24_007860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LNQ24_007865 PF01253 Translation initiation factor SUI1 LNQ24_007870 PF05433 Glycine zipper 2TM domain LNQ24_007875 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNQ24_007880 PF00563 EAL domain LNQ24_007880 PF13426 PAS domain LNQ24_007880 PF08448 PAS fold LNQ24_007880 PF05231 MASE1 LNQ24_007880 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_007880 PF08447 PAS fold LNQ24_007885 PF00575 S1 RNA binding domain LNQ24_007885 PF00773 RNB domain LNQ24_007885 PF08206 Ribonuclease B OB domain LNQ24_007890 PF00633 Helix-hairpin-helix motif LNQ24_007890 PF10576 Iron-sulfur binding domain of endonuclease III LNQ24_007890 PF00730 HhH-GPD superfamily base excision DNA repair protein LNQ24_007895 PF02508 Rnf-Nqr subunit, membrane protein LNQ24_007900 PF04205 FMN-binding domain LNQ24_007905 PF03116 NQR2, RnfD, RnfE family LNQ24_007910 PF12833 Helix-turn-helix domain LNQ24_007910 PF06445 GyrI-like small molecule binding domain LNQ24_007915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LNQ24_007915 PF10531 SLBB domain LNQ24_007915 PF13375 RnfC Barrel sandwich hybrid domain LNQ24_007915 PF13237 4Fe-4S dicluster domain LNQ24_007920 PF04060 Putative Fe-S cluster LNQ24_007925 PF02508 Rnf-Nqr subunit, membrane protein LNQ24_007930 PF10754 Protein of unknown function (DUF2569) LNQ24_007935 PF01268 Formate--tetrahydrofolate ligase LNQ24_007940 PF03848 Tellurite resistance protein TehB LNQ24_007940 PF09313 Domain of unknown function (DUF1971) LNQ24_007945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LNQ24_007945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ24_007950 PF13593 SBF-like CPA transporter family (DUF4137) LNQ24_007955 PF00962 Adenosine/AMP deaminase LNQ24_007960 PF06097 Bacterial protein of unknown function (DUF945) LNQ24_007965 PF01238 Phosphomannose isomerase type I LNQ24_007970 PF10415 Fumarase C C-terminus LNQ24_007970 PF00206 Lyase LNQ24_007975 PF05472 DNA replication terminus site-binding protein (Ter protein) LNQ24_007980 PF00480 ROK family LNQ24_007990 PF00654 Voltage gated chloride channel LNQ24_007995 PF06649 Protein of unknown function (DUF1161) LNQ24_008000 PF06932 Protein of unknown function (DUF1283) LNQ24_008005 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LNQ24_008010 PF00106 short chain dehydrogenase LNQ24_008015 PF01510 N-acetylmuramoyl-L-alanine amidase LNQ24_008060 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LNQ24_008060 PF01048 Phosphorylase superfamily LNQ24_008100 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_008110 PF06445 GyrI-like small molecule binding domain LNQ24_008115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNQ24_008115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LNQ24_008120 PF00027 Cyclic nucleotide-binding domain LNQ24_008120 PF13545 Crp-like helix-turn-helix domain LNQ24_008125 PF00582 Universal stress protein family LNQ24_008135 PF00455 DeoR C terminal sensor domain LNQ24_008135 PF08220 DeoR-like helix-turn-helix domain LNQ24_008140 PF03611 PTS system sugar-specific permease component LNQ24_008145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ24_008150 PF00596 Class II Aldolase and Adducin N-terminal domain LNQ24_008155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LNQ24_008160 PF01261 Xylose isomerase-like TIM barrel LNQ24_008165 PF02233 NAD(P) transhydrogenase beta subunit LNQ24_008170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LNQ24_008170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LNQ24_008170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LNQ24_008175 PF07338 Protein of unknown function (DUF1471) LNQ24_008180 PF13520 Amino acid permease LNQ24_008190 PF00072 Response regulator receiver domain LNQ24_008190 PF00486 Transcriptional regulatory protein, C terminal LNQ24_008195 PF00672 HAMP domain LNQ24_008195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_008195 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_008200 PF00080 Copper/zinc superoxide dismutase (SODC) LNQ24_008205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNQ24_008210 PF12833 Helix-turn-helix domain LNQ24_008215 PF01161 Phosphatidylethanolamine-binding protein LNQ24_008225 PF00089 Trypsin LNQ24_008230 PF11898 Domain of unknown function (DUF3418) LNQ24_008230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LNQ24_008230 PF00271 Helicase conserved C-terminal domain LNQ24_008230 PF04408 Helicase associated domain (HA2) LNQ24_008230 PF00270 DEAD/DEAH box helicase LNQ24_008235 PF02525 Flavodoxin-like fold LNQ24_008240 PF07027 Protein of unknown function (DUF1318) LNQ24_008245 PF13617 YnbE-like lipoprotein LNQ24_008255 PF11739 Dicarboxylate transport LNQ24_008260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ24_008260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ24_008265 PF03724 META domain LNQ24_008270 PF03891 Domain of unknown function (DUF333) LNQ24_008275 PF02308 MgtC family LNQ24_008280 PF00893 Small Multidrug Resistance protein LNQ24_008285 PF10371 Domain of unknown function LNQ24_008285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LNQ24_008285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LNQ24_008285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LNQ24_008285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ24_008290 PF01171 PP-loop family LNQ24_008295 PF01544 CorA-like Mg2+ transporter protein LNQ24_008300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_008305 PF00246 Zinc carboxypeptidase LNQ24_008310 PF13378 Enolase C-terminal domain-like LNQ24_008310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LNQ24_008315 PF08534 Redoxin LNQ24_008320 PF18024 Helix-turn-helix domain LNQ24_008320 PF00158 Sigma-54 interaction domain LNQ24_008325 PF09722 Protein of unknown function (DUF2384) LNQ24_008335 PF05128 Domain of unknown function (DUF697) LNQ24_008340 PF04317 YcjX-like family, DUF463 LNQ24_008345 PF09584 Phage shock protein PspD (Phageshock_PspD) LNQ24_008350 PF04024 PspC domain LNQ24_008355 PF06667 Phage shock protein B LNQ24_008360 PF04012 PspA/IM30 family LNQ24_008365 PF02954 Bacterial regulatory protein, Fis family LNQ24_008365 PF00158 Sigma-54 interaction domain LNQ24_008375 PF02917 Pertussis toxin, subunit 1 LNQ24_008380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_008385 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_008390 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_008390 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ24_008395 PF00005 ABC transporter LNQ24_008395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_008400 PF00005 ABC transporter LNQ24_008410 PF00854 POT family LNQ24_008420 PF01556 DnaJ C terminal domain LNQ24_008420 PF00226 DnaJ domain LNQ24_008430 PF04893 Yip1 domain LNQ24_008440 PF11656 YjbD family (DUF3811) LNQ24_008445 PF02798 Glutathione S-transferase, N-terminal domain LNQ24_008445 PF00043 Glutathione S-transferase, C-terminal domain LNQ24_008450 PF08543 Phosphomethylpyrimidine kinase LNQ24_008455 PF01479 S4 domain LNQ24_008455 PF00579 tRNA synthetases class I (W and Y) LNQ24_008460 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LNQ24_008460 PF01243 Pyridoxamine 5'-phosphate oxidase LNQ24_008465 PF03702 Anhydro-N-acetylmuramic acid kinase LNQ24_008470 PF05433 Glycine zipper 2TM domain LNQ24_008475 PF01047 MarR family LNQ24_008485 PF00248 Aldo/keto reductase family LNQ24_008490 PF06945 Protein of unknown function (DUF1289) LNQ24_008495 PF08019 Phosphoethanolamine transferase EptA/EptB LNQ24_008495 PF00884 Sulfatase LNQ24_008500 PF16925 Tetracyclin repressor-like, C-terminal domain LNQ24_008500 PF00440 Bacterial regulatory proteins, tetR family LNQ24_008505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNQ24_008510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNQ24_008515 PF00929 Exonuclease LNQ24_008520 PF00462 Glutaredoxin LNQ24_008525 PF00877 NlpC/P60 family LNQ24_008530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNQ24_008530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNQ24_008540 PF00356 Bacterial regulatory proteins, lacI family LNQ24_008545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_008545 PF03466 LysR substrate binding domain LNQ24_008550 PF07690 Major Facilitator Superfamily LNQ24_008560 PF00677 Lumazine binding domain LNQ24_008565 PF01554 MatE LNQ24_008585 PF00224 Pyruvate kinase, barrel domain LNQ24_008585 PF02887 Pyruvate kinase, alpha/beta domain LNQ24_008590 PF04728 Lipoprotein leucine-zipper LNQ24_008595 PF17969 L,D-transpeptidase C-terminal domain LNQ24_008595 PF01476 LysM domain LNQ24_008595 PF03734 L,D-transpeptidase catalytic domain LNQ24_008600 PF02657 Fe-S metabolism associated domain LNQ24_008605 PF00266 Aminotransferase class-V LNQ24_008610 PF01458 Uncharacterized protein family (UPF0051) LNQ24_008615 PF00005 ABC transporter LNQ24_008620 PF01458 Uncharacterized protein family (UPF0051) LNQ24_008625 PF01521 Iron-sulphur cluster biosynthesis LNQ24_008630 PF03061 Thioesterase superfamily LNQ24_008635 PF13183 4Fe-4S dicluster domain LNQ24_008635 PF02913 FAD linked oxidases, C-terminal domain LNQ24_008635 PF01565 FAD binding domain LNQ24_008640 PF01594 AI-2E family transporter LNQ24_008650 PF00391 PEP-utilising enzyme, mobile domain LNQ24_008650 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ24_008650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LNQ24_008655 PF03618 Kinase/pyrophosphorylase LNQ24_008660 PF00793 DAHP synthetase I family LNQ24_008665 PF10636 Hemin uptake protein hemP LNQ24_008670 PF07715 TonB-dependent Receptor Plug Domain LNQ24_008670 PF00593 TonB dependent receptor LNQ24_008675 PF05171 Haemin-degrading HemS.ChuX domain LNQ24_008680 PF01497 Periplasmic binding protein LNQ24_008685 PF01032 FecCD transport family LNQ24_008690 PF00005 ABC transporter LNQ24_008695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LNQ24_008700 PF03099 Biotin/lipoate A/B protein ligase family LNQ24_008700 PF10437 Bacterial lipoate protein ligase C-terminus LNQ24_008705 PF00877 NlpC/P60 family LNQ24_008715 PF00892 EamA-like transporter family LNQ24_008720 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LNQ24_008725 PF01522 Polysaccharide deacetylase LNQ24_008730 PF01370 NAD dependent epimerase/dehydratase family LNQ24_008730 PF02911 Formyl transferase, C-terminal domain LNQ24_008730 PF00551 Formyl transferase LNQ24_008735 PF00535 Glycosyl transferase family 2 LNQ24_008740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNQ24_008745 PF00005 ABC transporter LNQ24_008750 PF01032 FecCD transport family LNQ24_008755 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_008755 PF00589 Phage integrase family LNQ24_008770 PF02661 Fic/DOC family LNQ24_008785 PF04606 Ogr/Delta-like zinc finger LNQ24_008795 PF00216 Bacterial DNA-binding protein LNQ24_008800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LNQ24_008800 PF01588 Putative tRNA binding domain LNQ24_008800 PF03147 Ferredoxin-fold anticodon binding domain LNQ24_008800 PF03484 tRNA synthetase B5 domain LNQ24_008800 PF03483 B3/4 domain LNQ24_008805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LNQ24_008805 PF01409 tRNA synthetases class II core domain (F) LNQ24_008810 PF00453 Ribosomal protein L20 LNQ24_008815 PF01632 Ribosomal protein L35 LNQ24_008820 PF00707 Translation initiation factor IF-3, C-terminal domain LNQ24_008820 PF05198 Translation initiation factor IF-3, N-terminal domain LNQ24_008825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNQ24_008825 PF02824 TGS domain LNQ24_008825 PF03129 Anticodon binding domain LNQ24_008825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ24_008855 PF01914 MarC family integral membrane protein LNQ24_008860 PF01464 Transglycosylase SLT domain LNQ24_008865 PF01297 Zinc-uptake complex component A periplasmic LNQ24_008870 PF00005 ABC transporter LNQ24_008875 PF00950 ABC 3 transport family LNQ24_008880 PF00950 ABC 3 transport family LNQ24_008885 PF03881 Fructosamine kinase LNQ24_008890 PF14002 YniB-like protein LNQ24_008895 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_008900 PF04307 LexA-binding, inner membrane-associated putative hydrolase LNQ24_008905 PF00375 Sodium:dicarboxylate symporter family LNQ24_008910 PF01510 N-acetylmuramoyl-L-alanine amidase LNQ24_008915 PF09339 IclR helix-turn-helix domain LNQ24_008915 PF01614 Bacterial transcriptional regulator LNQ24_008920 PF07690 Major Facilitator Superfamily LNQ24_008930 PF01435 Peptidase family M48 LNQ24_008935 PF00595 PDZ domain LNQ24_008935 PF03572 Peptidase family S41 LNQ24_008935 PF17804 Tail specific protease N-terminal domain LNQ24_008935 PF11818 C-terminal domain of tail specific protease (DUF3340) LNQ24_008940 PF04352 ProQ/FINO family LNQ24_008940 PF17516 ProQ C-terminal domain LNQ24_008945 PF13185 GAF domain LNQ24_008950 PF04403 Paraquat-inducible protein A LNQ24_008955 PF02470 MlaD protein LNQ24_008960 PF00360 Phytochrome region LNQ24_008960 PF00563 EAL domain LNQ24_008960 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_008960 PF01590 GAF domain LNQ24_008965 PF07351 Protein of unknown function (DUF1480) LNQ24_008990 PF05643 Putative bacterial lipoprotein (DUF799) LNQ24_009000 PF03783 Curli production assembly/transport component CsgG LNQ24_009005 PF10753 Toxin GhoT_OrtT LNQ24_009025 PF00144 Beta-lactamase LNQ24_009035 PF10709 Protein of unknown function (DUF2511) LNQ24_009040 PF05425 Copper resistance protein D LNQ24_009045 PF04234 CopC domain LNQ24_009050 PF00210 Ferritin-like domain LNQ24_009055 PF06440 DNA polymerase III, theta subunit LNQ24_009060 PF00561 alpha/beta hydrolase fold LNQ24_009065 PF00929 Exonuclease LNQ24_009070 PF00326 Prolyl oligopeptidase family LNQ24_009070 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LNQ24_009075 PF13995 YebF-like protein LNQ24_009080 PF04266 ASCH domain LNQ24_009085 PF07130 YebG protein LNQ24_009090 PF03880 DbpA RNA binding domain LNQ24_009090 PF00270 DEAD/DEAH box helicase LNQ24_009090 PF00271 Helicase conserved C-terminal domain LNQ24_009095 PF02222 ATP-grasp domain LNQ24_009100 PF03701 Uncharacterised protein family (UPF0181) LNQ24_009105 PF04715 Anthranilate synthase component I, N terminal region LNQ24_009105 PF00425 chorismate binding enzyme LNQ24_009110 PF00293 NUDIX domain LNQ24_009115 PF03315 Serine dehydratase beta chain LNQ24_009115 PF03313 Serine dehydratase alpha chain LNQ24_009120 PF03471 Transporter associated domain LNQ24_009120 PF03741 Integral membrane protein TerC family LNQ24_009125 PF03610 PTS system fructose IIA component LNQ24_009125 PF03830 PTS system sorbose subfamily IIB component LNQ24_009130 PF03609 PTS system sorbose-specific iic component LNQ24_009135 PF03613 PTS system mannose/fructose/sorbose family IID component LNQ24_009140 PF06173 Protein of unknown function (DUF986) LNQ24_009145 PF02659 Putative manganese efflux pump LNQ24_009150 PF02441 Flavoprotein LNQ24_009165 PF02770 Acyl-CoA dehydrogenase, middle domain LNQ24_009165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNQ24_009165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNQ24_009175 PF05199 GMC oxidoreductase LNQ24_009175 PF00732 GMC oxidoreductase LNQ24_009180 PF00668 Condensation domain LNQ24_009180 PF00501 AMP-binding enzyme LNQ24_009180 PF13193 AMP-binding enzyme C-terminal domain LNQ24_009180 PF00550 Phosphopantetheine attachment site LNQ24_009185 PF07690 Major Facilitator Superfamily LNQ24_009205 PF13847 Methyltransferase domain LNQ24_009210 PF03717 Penicillin-binding Protein dimerisation domain LNQ24_009210 PF00905 Penicillin binding protein transpeptidase domain LNQ24_009215 PF02578 Multi-copper polyphenol oxidoreductase laccase LNQ24_009220 PF00313 'Cold-shock' DNA-binding domain LNQ24_009225 PF10736 Protein of unknown function (DUF2627) LNQ24_009230 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LNQ24_009235 PF00324 Amino acid permease LNQ24_009250 PF13974 YebO-like protein LNQ24_009255 PF13998 MgrB protein LNQ24_009260 PF13996 YobH-like protein LNQ24_009265 PF10964 Protein of unknown function (DUF2766) LNQ24_009270 PF12833 Helix-turn-helix domain LNQ24_009285 PF13520 Amino acid permease LNQ24_009290 PF00664 ABC transporter transmembrane region LNQ24_009290 PF00005 ABC transporter LNQ24_009305 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ24_009315 PF06411 HdeA/HdeB family LNQ24_009320 PF07478 D-ala D-ala ligase C-terminus LNQ24_009320 PF01820 D-ala D-ala ligase N-terminus LNQ24_009335 PF08241 Methyltransferase domain LNQ24_009340 PF00313 'Cold-shock' DNA-binding domain LNQ24_009345 PF00313 'Cold-shock' DNA-binding domain LNQ24_009350 PF00313 'Cold-shock' DNA-binding domain LNQ24_009360 PF04794 YdjC-like protein LNQ24_009365 PF07883 Cupin domain LNQ24_009365 PF12833 Helix-turn-helix domain LNQ24_009370 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LNQ24_009375 PF00232 Glycosyl hydrolase family 1 LNQ24_009380 PF02378 Phosphotransferase system, EIIC LNQ24_009385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ24_009390 PF01479 S4 domain LNQ24_009390 PF00849 RNA pseudouridylate synthase LNQ24_009400 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LNQ24_009405 PF03553 Na+/H+ antiporter family LNQ24_009415 PF13520 Amino acid permease LNQ24_009430 PF00849 RNA pseudouridylate synthase LNQ24_009435 PF00282 Pyridoxal-dependent decarboxylase conserved domain LNQ24_009440 PF13520 Amino acid permease LNQ24_009445 PF04960 Glutaminase LNQ24_009475 PF13673 Acetyltransferase (GNAT) domain LNQ24_009485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LNQ24_009485 PF00034 Cytochrome c LNQ24_009495 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_009500 PF00005 ABC transporter LNQ24_009510 PF02203 Tar ligand binding domain homologue LNQ24_009510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_009510 PF00672 HAMP domain LNQ24_009515 PF13276 HTH-like domain LNQ24_009515 PF00665 Integrase core domain LNQ24_009515 PF13333 Integrase core domain LNQ24_009520 PF13614 AAA domain LNQ24_009525 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_009525 PF00589 Phage integrase family LNQ24_009545 PF06892 Phage regulatory protein CII (CP76) LNQ24_009565 PF05840 Bacteriophage replication gene A protein (GPA) LNQ24_009670 PF07484 Phage Tail Collar Domain LNQ24_009675 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ24_009715 PF04606 Ogr/Delta-like zinc finger LNQ24_009735 PF01066 CDP-alcohol phosphatidyltransferase LNQ24_009740 PF01541 GIY-YIG catalytic domain LNQ24_009740 PF02151 UvrB/uvrC motif LNQ24_009740 PF08459 UvrC Helix-hairpin-helix N-terminal LNQ24_009745 PF00196 Bacterial regulatory proteins, luxR family LNQ24_009745 PF00072 Response regulator receiver domain LNQ24_009750 PF10769 Protein of unknown function (DUF2594) LNQ24_009770 PF00324 Amino acid permease LNQ24_009775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ24_009775 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ24_009775 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ24_009780 PF13520 Amino acid permease LNQ24_009785 PF18500 CadC C-terminal domain 1 LNQ24_009785 PF00486 Transcriptional regulatory protein, C terminal LNQ24_009790 PF00474 Sodium:solute symporter family LNQ24_009795 PF01619 Proline dehydrogenase LNQ24_009795 PF00171 Aldehyde dehydrogenase family LNQ24_009795 PF14850 DNA-binding domain of Proline dehydrogenase LNQ24_009795 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LNQ24_009800 PF00005 ABC transporter LNQ24_009805 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_009810 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_009815 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_009820 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_009825 PF04542 Sigma-70 region 2 LNQ24_009825 PF04539 Sigma-70 region 3 LNQ24_009825 PF04545 Sigma-70, region 4 LNQ24_009830 PF00669 Bacterial flagellin N-terminal helical region LNQ24_009830 PF00700 Bacterial flagellin C-terminal helical region LNQ24_009830 PF08884 Flagellin D3 domain LNQ24_009835 PF00700 Bacterial flagellin C-terminal helical region LNQ24_009835 PF08884 Flagellin D3 domain LNQ24_009835 PF00669 Bacterial flagellin N-terminal helical region LNQ24_009840 PF00669 Bacterial flagellin N-terminal helical region LNQ24_009840 PF00700 Bacterial flagellin C-terminal helical region LNQ24_009840 PF08884 Flagellin D3 domain LNQ24_009845 PF07196 Flagellin hook IN motif LNQ24_009845 PF02465 Flagellar hook-associated protein 2 N-terminus LNQ24_009845 PF07195 Flagellar hook-associated protein 2 C-terminus LNQ24_009850 PF02561 Flagellar protein FliS LNQ24_009855 PF05400 Flagellar protein FliT LNQ24_009860 PF12833 Helix-turn-helix domain LNQ24_009865 PF01966 HD domain LNQ24_009870 PF07885 Ion channel LNQ24_009870 PF02254 TrkA-N domain LNQ24_009875 PF01223 DNA/RNA non-specific endonuclease LNQ24_009885 PF02049 Flagellar hook-basal body complex protein FliE LNQ24_009890 PF01514 Secretory protein of YscJ/FliF family LNQ24_009890 PF08345 Flagellar M-ring protein C-terminal LNQ24_009895 PF01706 FliG C-terminal domain LNQ24_009895 PF14841 FliG middle domain LNQ24_009895 PF14842 FliG N-terminal domain LNQ24_009900 PF02108 Flagellar assembly protein FliH LNQ24_009905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ24_009905 PF18269 T3SS EscN ATPase C-terminal domain LNQ24_009910 PF02050 Flagellar FliJ protein LNQ24_009915 PF02120 Flagellar hook-length control protein FliK LNQ24_009920 PF03748 Flagellar basal body-associated protein FliL LNQ24_009925 PF02154 Flagellar motor switch protein FliM LNQ24_009925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ24_009930 PF16973 Flagellar motor switch protein FliN N-terminal LNQ24_009930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ24_009935 PF04347 Flagellar biosynthesis protein, FliO LNQ24_009940 PF00813 FliP family LNQ24_009945 PF01313 Bacterial export proteins, family 3 LNQ24_009950 PF01311 Bacterial export proteins, family 1 LNQ24_009955 PF00669 Bacterial flagellin N-terminal helical region LNQ24_009960 PF00460 Flagella basal body rod protein LNQ24_009960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ24_009965 PF10135 Rod binding protein LNQ24_009965 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LNQ24_009970 PF02119 Flagellar P-ring protein LNQ24_009975 PF02107 Flagellar L-ring protein LNQ24_009980 PF00460 Flagella basal body rod protein LNQ24_009980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ24_009985 PF00460 Flagella basal body rod protein LNQ24_009985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ24_009990 PF00460 Flagella basal body rod protein LNQ24_009990 PF07559 Flagellar basal body protein FlaE LNQ24_009990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ24_009995 PF03963 Flagellar hook capping protein - N-terminal region LNQ24_009995 PF13860 FlgD Ig-like domain LNQ24_009995 PF13861 FlgD Tudor-like domain LNQ24_010000 PF00460 Flagella basal body rod protein LNQ24_010000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ24_010005 PF00460 Flagella basal body rod protein LNQ24_010010 PF13144 Chaperone for flagella basal body P-ring formation LNQ24_010010 PF17656 FlgA N-terminal domain LNQ24_010015 PF04316 Anti-sigma-28 factor, FlgM LNQ24_010020 PF05130 FlgN protein LNQ24_010030 PF06366 Flagellar protein FlhE LNQ24_010035 PF00771 FHIPEP family LNQ24_010040 PF01312 FlhB HrpN YscU SpaS Family LNQ24_010045 PF01483 Proprotein convertase P-domain LNQ24_010045 PF00082 Subtilase family LNQ24_010060 PF00419 Fimbrial protein LNQ24_010065 PF13954 PapC N-terminal domain LNQ24_010065 PF13953 PapC C-terminal domain LNQ24_010065 PF00577 Outer membrane usher protein LNQ24_010070 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_010070 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_010080 PF00419 Fimbrial protein LNQ24_010110 PF04344 Chemotaxis phosphatase, CheZ LNQ24_010115 PF00072 Response regulator receiver domain LNQ24_010120 PF01339 CheB methylesterase LNQ24_010120 PF00072 Response regulator receiver domain LNQ24_010125 PF01739 CheR methyltransferase, SAM binding domain LNQ24_010125 PF03705 CheR methyltransferase, all-alpha domain LNQ24_010130 PF02203 Tar ligand binding domain homologue LNQ24_010130 PF00672 HAMP domain LNQ24_010130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_010135 PF00672 HAMP domain LNQ24_010135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_010135 PF02203 Tar ligand binding domain homologue LNQ24_010140 PF01584 CheW-like domain LNQ24_010145 PF09078 CheY binding LNQ24_010145 PF02895 Signal transducing histidine kinase, homodimeric domain LNQ24_010145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_010145 PF01627 Hpt domain LNQ24_010145 PF01584 CheW-like domain LNQ24_010150 PF00691 OmpA family LNQ24_010150 PF13677 Membrane MotB of proton-channel complex MotA/MotB LNQ24_010155 PF01618 MotA/TolQ/ExbB proton channel family LNQ24_010160 PF05280 Flagellar transcriptional activator (FlhC) LNQ24_010165 PF05247 Flagellar transcriptional activator (FlhD) LNQ24_010170 PF00582 Universal stress protein family LNQ24_010175 PF02308 MgtC family LNQ24_010180 PF00672 HAMP domain LNQ24_010180 PF02203 Tar ligand binding domain homologue LNQ24_010180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_010185 PF10781 Dextransucrase DSRB LNQ24_010190 PF00313 'Cold-shock' DNA-binding domain LNQ24_010195 PF00356 Bacterial regulatory proteins, lacI family LNQ24_010200 PF16353 Domain of unknown function(DUF4981) LNQ24_010200 PF02837 Glycosyl hydrolases family 2, sugar binding domain LNQ24_010200 PF02929 Beta galactosidase small chain LNQ24_010200 PF00703 Glycosyl hydrolases family 2 LNQ24_010200 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LNQ24_010205 PF14765 Polyketide synthase dehydratase LNQ24_010205 PF00698 Acyl transferase domain LNQ24_010205 PF08240 Alcohol dehydrogenase GroES-like domain LNQ24_010205 PF00107 Zinc-binding dehydrogenase LNQ24_010205 PF16197 Ketoacyl-synthetase C-terminal extension LNQ24_010205 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ24_010205 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ24_010205 PF08659 KR domain LNQ24_010205 PF00550 Phosphopantetheine attachment site LNQ24_010210 PF10777 Inner membrane protein YlaC LNQ24_010220 PF14001 YdfZ protein LNQ24_010230 PF06167 Glucose-regulated metallo-peptidase M90 LNQ24_010250 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LNQ24_010250 PF01648 4'-phosphopantetheinyl transferase superfamily LNQ24_010255 PF00939 Sodium:sulfate symporter transmembrane region LNQ24_010260 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LNQ24_010265 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LNQ24_010270 PF04223 Citrate lyase, alpha subunit (CitF) LNQ24_010275 PF03328 HpcH/HpaI aldolase/citrate lyase family LNQ24_010280 PF06857 Malonate decarboxylase delta subunit (MdcD) LNQ24_010285 PF08218 Citrate lyase ligase C-terminal domain LNQ24_010290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_010290 PF00989 PAS fold LNQ24_010290 PF17203 Single cache domain 3 LNQ24_010290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LNQ24_010295 PF12431 Transcriptional regulator LNQ24_010295 PF00072 Response regulator receiver domain LNQ24_010300 PF00196 Bacterial regulatory proteins, luxR family LNQ24_010300 PF00072 Response regulator receiver domain LNQ24_010305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_010305 PF05231 MASE1 LNQ24_010305 PF07730 Histidine kinase LNQ24_010310 PF07690 Major Facilitator Superfamily LNQ24_010320 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_010325 PF08402 TOBE domain LNQ24_010325 PF00005 ABC transporter LNQ24_010340 PF04363 Protein of unknown function (DUF496) LNQ24_010345 PF04632 Fusaric acid resistance protein family LNQ24_010355 PF08411 Exonuclease C-terminal LNQ24_010355 PF00929 Exonuclease LNQ24_010360 PF13520 Amino acid permease LNQ24_010365 PF07715 TonB-dependent Receptor Plug Domain LNQ24_010365 PF00593 TonB dependent receptor LNQ24_010370 PF00005 ABC transporter LNQ24_010375 PF01032 FecCD transport family LNQ24_010385 PF00324 Amino acid permease LNQ24_010390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_010390 PF03466 LysR substrate binding domain LNQ24_010400 PF03601 Conserved hypothetical protein 698 LNQ24_010405 PF01261 Xylose isomerase-like TIM barrel LNQ24_010410 PF02378 Phosphotransferase system, EIIC LNQ24_010410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ24_010415 PF00294 pfkB family carbohydrate kinase LNQ24_010420 PF00381 PTS HPr component phosphorylation site LNQ24_010420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ24_010425 PF00293 NUDIX domain LNQ24_010430 PF03264 NapC/NirT cytochrome c family, N-terminal region LNQ24_010435 PF00384 Molybdopterin oxidoreductase LNQ24_010435 PF18364 Molybdopterin oxidoreductase N-terminal domain LNQ24_010435 PF01568 Molydopterin dinucleotide binding domain LNQ24_010440 PF03692 Putative zinc- or iron-chelating domain LNQ24_010445 PF03222 Tryptophan/tyrosine permease family LNQ24_010450 PF09285 Elongation factor P, C-terminal LNQ24_010450 PF08207 Elongation factor P (EF-P) KOW-like domain LNQ24_010450 PF01132 Elongation factor P (EF-P) OB domain LNQ24_010455 PF03786 D-mannonate dehydratase (UxuA) LNQ24_010460 PF08125 Mannitol dehydrogenase C-terminal domain LNQ24_010460 PF01232 Mannitol dehydrogenase Rossmann domain LNQ24_010470 PF07683 Cobalamin synthesis protein cobW C-terminal domain LNQ24_010470 PF02492 CobW/HypB/UreG, nucleotide-binding domain LNQ24_010475 PF01569 PAP2 superfamily LNQ24_010480 PF00877 NlpC/P60 family LNQ24_010485 PF12792 CSS motif domain associated with EAL LNQ24_010485 PF00563 EAL domain LNQ24_010490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_010495 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_010500 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_010500 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ24_010505 PF00005 ABC transporter LNQ24_010505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ24_010510 PF13989 YejG-like protein LNQ24_010515 PF07690 Major Facilitator Superfamily LNQ24_010520 PF00849 RNA pseudouridylate synthase LNQ24_010520 PF01479 S4 domain LNQ24_010525 PF04851 Type III restriction enzyme, res subunit LNQ24_010525 PF00271 Helicase conserved C-terminal domain LNQ24_010530 PF01386 Ribosomal L25p family LNQ24_010535 PF04245 37-kD nucleoid-associated bacterial protein LNQ24_010540 PF07208 Protein of unknown function (DUF1414) LNQ24_010545 PF11893 Domain of unknown function (DUF3413) LNQ24_010545 PF00884 Sulfatase LNQ24_010565 PF06183 DinI-like family LNQ24_010570 PF12706 Beta-lactamase superfamily domain LNQ24_010575 PF00144 Beta-lactamase LNQ24_010580 PF13302 Acetyltransferase (GNAT) domain LNQ24_010595 PF00267 Gram-negative porin LNQ24_010600 PF07690 Major Facilitator Superfamily LNQ24_010605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_010605 PF01627 Hpt domain LNQ24_010605 PF16359 RcsD-ABL domain LNQ24_010610 PF00072 Response regulator receiver domain LNQ24_010610 PF00196 Bacterial regulatory proteins, luxR family LNQ24_010615 PF00072 Response regulator receiver domain LNQ24_010615 PF09456 RcsC Alpha-Beta-Loop (ABL) LNQ24_010615 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_010615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_010620 PF00521 DNA gyrase/topoisomerase IV, subunit A LNQ24_010620 PF03989 DNA gyrase C-terminal domain, beta-propeller LNQ24_010630 PF00317 Ribonucleotide reductase, all-alpha domain LNQ24_010630 PF03477 ATP cone domain LNQ24_010630 PF02867 Ribonucleotide reductase, barrel domain LNQ24_010635 PF00268 Ribonucleotide reductase, small chain LNQ24_010640 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ24_010650 PF03974 Ecotin LNQ24_010655 PF00994 Probable molybdopterin binding domain LNQ24_010660 PF04138 GtrA-like protein LNQ24_010665 PF00535 Glycosyl transferase family 2 LNQ24_010675 PF03222 Tryptophan/tyrosine permease family LNQ24_010680 PF07437 YfaZ precursor LNQ24_010685 PF06628 Catalase-related immune-responsive LNQ24_010685 PF00199 Catalase LNQ24_010690 PF00501 AMP-binding enzyme LNQ24_010690 PF13193 AMP-binding enzyme C-terminal domain LNQ24_010695 PF13378 Enolase C-terminal domain-like LNQ24_010700 PF00378 Enoyl-CoA hydratase/isomerase LNQ24_010705 PF12697 Alpha/beta hydrolase family LNQ24_010710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ24_010710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ24_010710 PF16582 Middle domain of thiamine pyrophosphate LNQ24_010715 PF00425 chorismate binding enzyme LNQ24_010720 PF05957 Bacterial protein of unknown function (DUF883) LNQ24_010725 PF06496 Protein of unknown function (DUF1097) LNQ24_010730 PF00361 Proton-conducting membrane transporter LNQ24_010735 PF00361 Proton-conducting membrane transporter LNQ24_010740 PF00361 Proton-conducting membrane transporter LNQ24_010740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LNQ24_010745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LNQ24_010750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LNQ24_010755 PF12838 4Fe-4S dicluster domain LNQ24_010760 PF00146 NADH dehydrogenase LNQ24_010765 PF01568 Molydopterin dinucleotide binding domain LNQ24_010765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LNQ24_010765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ24_010765 PF00384 Molybdopterin oxidoreductase LNQ24_010770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LNQ24_010770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LNQ24_010770 PF10531 SLBB domain LNQ24_010780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LNQ24_010780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LNQ24_010785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LNQ24_010790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LNQ24_010795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_010795 PF03466 LysR substrate binding domain LNQ24_010800 PF00155 Aminotransferase class I and II LNQ24_010810 PF03600 Citrate transporter LNQ24_010810 PF02080 TrkA-C domain LNQ24_010820 PF03887 YfbU domain LNQ24_010825 PF04217 Protein of unknown function, DUF412 LNQ24_010830 PF00871 Acetokinase family LNQ24_010835 PF07085 DRTGG domain LNQ24_010835 PF01515 Phosphate acetyl/butaryl transferase LNQ24_010840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ24_010840 PF00356 Bacterial regulatory proteins, lacI family LNQ24_010845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ24_010855 PF03611 PTS system sugar-specific permease component LNQ24_010860 PF00293 NUDIX domain LNQ24_010865 PF12850 Calcineurin-like phosphoesterase superfamily domain LNQ24_010875 PF02798 Glutathione S-transferase, N-terminal domain LNQ24_010875 PF00043 Glutathione S-transferase, C-terminal domain LNQ24_010880 PF08338 Domain of unknown function (DUF1731) LNQ24_010880 PF01370 NAD dependent epimerase/dehydratase family LNQ24_010885 PF00005 ABC transporter LNQ24_010890 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_010895 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_010900 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_010910 PF02441 Flavoprotein LNQ24_010915 PF00156 Phosphoribosyl transferase domain LNQ24_010920 PF02674 Colicin V production protein LNQ24_010925 PF05036 Sporulation related domain LNQ24_010930 PF02875 Mur ligase family, glutamate ligase domain LNQ24_010930 PF08245 Mur ligase middle domain LNQ24_010935 PF01039 Carboxyl transferase domain LNQ24_010935 PF17848 Acetyl-coA carboxylase zinc finger domain LNQ24_010940 PF09335 SNARE associated Golgi protein LNQ24_010945 PF01416 tRNA pseudouridine synthase LNQ24_010950 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ24_010950 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ24_010955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ24_010955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ24_010955 PF11890 Domain of unknown function (DUF3410) LNQ24_010975 PF00155 Aminotransferase class I and II LNQ24_010980 PF00578 AhpC/TSA family LNQ24_011010 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ24_011010 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ24_011015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LNQ24_011015 PF01266 FAD dependent oxidoreductase LNQ24_011020 PF08891 YfcL protein LNQ24_011025 PF04315 Elongation factor P hydroxylase LNQ24_011030 PF01925 Sulfite exporter TauE/SafE LNQ24_011035 PF03411 Penicillin-insensitive murein endopeptidase LNQ24_011040 PF01264 Chorismate synthase LNQ24_011045 PF05175 Methyltransferase small domain LNQ24_011050 PF01713 Smr domain LNQ24_011055 PF00300 Histidine phosphatase superfamily (branch 1) LNQ24_011060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNQ24_011060 PF00378 Enoyl-CoA hydratase/isomerase LNQ24_011060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNQ24_011065 PF00108 Thiolase, N-terminal domain LNQ24_011065 PF02803 Thiolase, C-terminal domain LNQ24_011070 PF04175 Protein of unknown function (DUF406) LNQ24_011075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LNQ24_011080 PF04333 MlaA lipoprotein LNQ24_011085 PF03918 Cytochrome C biogenesis protein LNQ24_011090 PF03918 Cytochrome C biogenesis protein LNQ24_011095 PF08534 Redoxin LNQ24_011100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LNQ24_011100 PF01578 Cytochrome C assembly protein LNQ24_011105 PF03100 CcmE LNQ24_011110 PF04995 Heme exporter protein D (CcmD) LNQ24_011115 PF01578 Cytochrome C assembly protein LNQ24_011120 PF03379 CcmB protein LNQ24_011125 PF00005 ABC transporter LNQ24_011140 PF08274 PhnA Zinc-Ribbon LNQ24_011140 PF03831 PhnA domain LNQ24_011145 PF13406 Transglycosylase SLT domain LNQ24_011160 PF01292 Prokaryotic cytochrome b561 LNQ24_011165 PF00155 Aminotransferase class I and II LNQ24_011170 PF07350 Protein of unknown function (DUF1479) LNQ24_011175 PF06580 Histidine kinase LNQ24_011175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_011175 PF07694 5TMR of 5TMR-LYT LNQ24_011180 PF04397 LytTr DNA-binding domain LNQ24_011180 PF00072 Response regulator receiver domain LNQ24_011185 PF07690 Major Facilitator Superfamily LNQ24_011190 PF02685 Glucokinase LNQ24_011200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_011200 PF03466 LysR substrate binding domain LNQ24_011210 PF01566 Natural resistance-associated macrophage protein LNQ24_011215 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ24_011215 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ24_011215 PF07670 Nucleoside recognition LNQ24_011250 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ24_011280 PF12843 Putative quorum-sensing-regulated virulence factor LNQ24_011285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LNQ24_011285 PF00533 BRCA1 C Terminus (BRCT) domain LNQ24_011285 PF01653 NAD-dependent DNA ligase adenylation domain LNQ24_011285 PF03120 NAD-dependent DNA ligase OB-fold domain LNQ24_011285 PF12826 Helix-hairpin-helix motif LNQ24_011290 PF04354 ZipA, C-terminal FtsZ-binding domain LNQ24_011300 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_011305 PF00381 PTS HPr component phosphorylation site LNQ24_011310 PF05524 PEP-utilising enzyme, N-terminal LNQ24_011310 PF00391 PEP-utilising enzyme, mobile domain LNQ24_011310 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ24_011315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LNQ24_011320 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_011325 PF00005 ABC transporter LNQ24_011330 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_011335 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_011345 PF07690 Major Facilitator Superfamily LNQ24_011350 PF01418 Helix-turn-helix domain, rpiR family LNQ24_011350 PF01380 SIS domain LNQ24_011355 PF04074 YhcH/YjgK/YiaL LNQ24_011360 PF00480 ROK family LNQ24_011365 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LNQ24_011370 PF00701 Dihydrodipicolinate synthetase family LNQ24_011375 PF04261 Dyp-type peroxidase family LNQ24_011380 PF06572 Protein of unknown function (DUF1131) LNQ24_011385 PF04076 Bacterial OB fold (BOF) protein LNQ24_011435 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_011435 PF06480 FtsH Extracellular LNQ24_011435 PF01434 Peptidase family M41 LNQ24_011435 PF17862 AAA+ lid domain LNQ24_011445 PF00583 Acetyltransferase (GNAT) family LNQ24_011450 PF01218 Coproporphyrinogen III oxidase LNQ24_011455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LNQ24_011460 PF00390 Malic enzyme, N-terminal domain LNQ24_011460 PF03949 Malic enzyme, NAD binding domain LNQ24_011460 PF01515 Phosphate acetyl/butaryl transferase LNQ24_011465 PF00293 NUDIX domain LNQ24_011470 PF03264 NapC/NirT cytochrome c family, N-terminal region LNQ24_011475 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LNQ24_011480 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNQ24_011480 PF00384 Molybdopterin oxidoreductase LNQ24_011480 PF01568 Molydopterin dinucleotide binding domain LNQ24_011480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ24_011485 PF03927 NapD protein LNQ24_011490 PF00037 4Fe-4S binding domain LNQ24_011490 PF12800 4Fe-4S binding domain LNQ24_011490 PF13187 4Fe-4S dicluster domain LNQ24_011495 PF00196 Bacterial regulatory proteins, luxR family LNQ24_011495 PF00072 Response regulator receiver domain LNQ24_011505 PF00873 AcrB/AcrD/AcrF family LNQ24_011515 PF01817 Chorismate mutase type II LNQ24_011520 PF03960 ArsC family LNQ24_011525 PF07687 Peptidase dimerisation domain LNQ24_011525 PF01546 Peptidase family M20/M25/M40 LNQ24_011530 PF02557 D-alanyl-D-alanine carboxypeptidase LNQ24_011535 PF13980 Uncharacterised protein family (UPF0370) LNQ24_011540 PF02230 Phospholipase/Carboxylesterase LNQ24_011545 PF17176 tRNA-binding domain LNQ24_011545 PF05127 Helicase LNQ24_011545 PF13718 GNAT acetyltransferase 2 LNQ24_011545 PF08351 Domain of unknown function (DUF1726) LNQ24_011550 PF04284 Protein of unknown function (DUF441) LNQ24_011555 PF01259 SAICAR synthetase LNQ24_011560 PF06804 NlpB/DapX lipoprotein LNQ24_011565 PF00701 Dihydrodipicolinate synthetase family LNQ24_011570 PF01842 ACT domain LNQ24_011575 PF00578 AhpC/TSA family LNQ24_011580 PF01594 AI-2E family transporter LNQ24_011585 PF01435 Peptidase family M48 LNQ24_011585 PF07720 Tetratricopeptide repeat LNQ24_011590 PF03960 ArsC family LNQ24_011595 PF00308 Bacterial dnaA protein LNQ24_011600 PF00860 Permease family LNQ24_011610 PF00586 AIR synthase related protein, N-terminal domain LNQ24_011610 PF02769 AIR synthase related protein, C-terminal domain LNQ24_011615 PF00551 Formyl transferase LNQ24_011620 PF13302 Acetyltransferase (GNAT) domain LNQ24_011625 PF00005 ABC transporter LNQ24_011630 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_011635 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_011640 PF13089 Polyphosphate kinase N-terminal domain LNQ24_011640 PF17941 Polyphosphate kinase C-terminal domain 1 LNQ24_011640 PF13090 Polyphosphate kinase C-terminal domain 2 LNQ24_011640 PF02503 Polyphosphate kinase middle domain LNQ24_011645 PF02541 Ppx/GppA phosphatase family LNQ24_011655 PF03448 MgtE intracellular N domain LNQ24_011655 PF01769 Divalent cation transporter LNQ24_011655 PF00571 CBS domain LNQ24_011660 PF00012 Hsp70 protein LNQ24_011670 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_011670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_011675 PF13953 PapC C-terminal domain LNQ24_011675 PF13954 PapC N-terminal domain LNQ24_011675 PF00577 Outer membrane usher protein LNQ24_011695 PF13533 Biotin-lipoyl like LNQ24_011700 PF00873 AcrB/AcrD/AcrF family LNQ24_011705 PF00873 AcrB/AcrD/AcrF family LNQ24_011710 PF07690 Major Facilitator Superfamily LNQ24_011715 PF00672 HAMP domain LNQ24_011715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_011715 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_011720 PF00072 Response regulator receiver domain LNQ24_011720 PF00486 Transcriptional regulatory protein, C terminal LNQ24_011725 PF07411 Domain of unknown function (DUF1508) LNQ24_011730 PF01136 Peptidase family U32 LNQ24_011730 PF16325 Peptidase family U32 C-terminal domain LNQ24_011735 PF00781 Diacylglycerol kinase catalytic domain LNQ24_011750 PF08543 Phosphomethylpyrimidine kinase LNQ24_011760 PF00117 Glutamine amidotransferase class-I LNQ24_011760 PF00958 GMP synthase C terminal domain LNQ24_011760 PF02540 NAD synthase LNQ24_011765 PF00571 CBS domain LNQ24_011765 PF00478 IMP dehydrogenase / GMP reductase domain LNQ24_011770 PF02601 Exonuclease VII, large subunit LNQ24_011770 PF13742 OB-fold nucleic acid binding domain LNQ24_011775 PF07191 zinc-ribbons LNQ24_011780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LNQ24_011780 PF01926 50S ribosome-binding GTPase LNQ24_011785 PF13360 PQQ-like domain LNQ24_011790 PF09976 Tetratricopeptide repeat-like domain LNQ24_011795 PF03129 Anticodon binding domain LNQ24_011795 PF13393 Histidyl-tRNA synthetase LNQ24_011800 PF04551 GcpE protein LNQ24_011805 PF13464 Domain of unknown function (DUF4115) LNQ24_011815 PF04055 Radical SAM superfamily LNQ24_011820 PF00334 Nucleoside diphosphate kinase LNQ24_011830 PF00912 Transglycosylase LNQ24_011830 PF00905 Penicillin binding protein transpeptidase domain LNQ24_011830 PF06832 Penicillin-Binding Protein C-terminus Family LNQ24_011835 PF07703 Alpha-2-macroglobulin bait region domain LNQ24_011835 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LNQ24_011835 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LNQ24_011835 PF17962 Bacterial macroglobulin domain 6 LNQ24_011835 PF01835 MG2 domain LNQ24_011835 PF07678 A-macroglobulin TED domain LNQ24_011835 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LNQ24_011835 PF00207 Alpha-2-macroglobulin family LNQ24_011835 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LNQ24_011840 PF14581 SseB protein C-terminal domain LNQ24_011840 PF07179 SseB protein N-terminal domain LNQ24_011845 PF00883 Cytosol aminopeptidase family, catalytic domain LNQ24_011845 PF12404 Peptidase LNQ24_011850 PF04384 Iron-sulphur cluster assembly LNQ24_011855 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ24_011860 PF00012 Hsp70 protein LNQ24_011865 PF00226 DnaJ domain LNQ24_011865 PF07743 HSCB C-terminal oligomerisation domain LNQ24_011870 PF01521 Iron-sulphur cluster biosynthesis LNQ24_011875 PF01592 NifU-like N terminal domain LNQ24_011880 PF00266 Aminotransferase class-V LNQ24_011885 PF02082 Transcriptional regulator LNQ24_011890 PF00588 SpoU rRNA Methylase family LNQ24_011895 PF00459 Inositol monophosphatase family LNQ24_011900 PF03824 High-affinity nickel-transport protein LNQ24_011905 PF06226 Protein of unknown function (DUF1007) LNQ24_011910 PF00874 PRD domain LNQ24_011915 PF12832 MFS_1 like family LNQ24_011920 PF00464 Serine hydroxymethyltransferase LNQ24_011925 PF00175 Oxidoreductase NAD-binding domain LNQ24_011925 PF00970 Oxidoreductase FAD-binding domain LNQ24_011925 PF00042 Globin LNQ24_011930 PF14503 YhfZ C-terminal domain LNQ24_011930 PF14502 Helix-turn-helix domain LNQ24_011940 PF01168 Alanine racemase, N-terminal domain LNQ24_011945 PF02126 Phosphotriesterase family LNQ24_011950 PF10941 Protein of unknown function DUF2620 LNQ24_011955 PF10797 Protein of unknown function LNQ24_011960 PF00543 Nitrogen regulatory protein P-II LNQ24_011965 PF00795 Carbon-nitrogen hydrolase LNQ24_011965 PF02540 NAD synthase LNQ24_011970 PF00072 Response regulator receiver domain LNQ24_011970 PF00158 Sigma-54 interaction domain LNQ24_011980 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_011980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_011990 PF02769 AIR synthase related protein, C-terminal domain LNQ24_011990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LNQ24_011990 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LNQ24_011995 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_011995 PF01464 Transglycosylase SLT domain LNQ24_012000 PF14437 MafB19-like deaminase LNQ24_012010 PF02378 Phosphotransferase system, EIIC LNQ24_012010 PF00367 phosphotransferase system, EIIB LNQ24_012015 PF01380 SIS domain LNQ24_012020 PF01418 Helix-turn-helix domain, rpiR family LNQ24_012020 PF01380 SIS domain LNQ24_012025 PF12838 4Fe-4S dicluster domain LNQ24_012030 PF01648 4'-phosphopantetheinyl transferase superfamily LNQ24_012035 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LNQ24_012040 PF02565 Recombination protein O C terminal LNQ24_012040 PF11967 Recombination protein O N terminal LNQ24_012045 PF07650 KH domain LNQ24_012045 PF01926 50S ribosome-binding GTPase LNQ24_012050 PF00035 Double-stranded RNA binding motif LNQ24_012050 PF14622 Ribonuclease-III-like LNQ24_012055 PF10502 Signal peptidase, peptidase S26 LNQ24_012060 PF00679 Elongation factor G C-terminus LNQ24_012060 PF00009 Elongation factor Tu GTP binding domain LNQ24_012060 PF03144 Elongation factor Tu domain 2 LNQ24_012060 PF06421 GTP-binding protein LepA C-terminus LNQ24_012070 PF17188 MucB/RseB C-terminal domain LNQ24_012070 PF03888 MucB/RseB N-terminal domain LNQ24_012075 PF03873 Anti sigma-E protein RseA, C-terminal domain LNQ24_012075 PF03872 Anti sigma-E protein RseA, N-terminal domain LNQ24_012080 PF04542 Sigma-70 region 2 LNQ24_012080 PF08281 Sigma-70, region 4 LNQ24_012085 PF00890 FAD binding domain LNQ24_012085 PF02910 Fumarate reductase flavoprotein C-term LNQ24_012090 PF05175 Methyltransferase small domain LNQ24_012095 PF00270 DEAD/DEAH box helicase LNQ24_012095 PF00271 Helicase conserved C-terminal domain LNQ24_012100 PF12796 Ankyrin repeats (3 copies) LNQ24_012110 PF01228 Glycine radical LNQ24_012115 PF03167 Uracil DNA glycosylase superfamily LNQ24_012120 PF01025 GrpE LNQ24_012125 PF01513 ATP-NAD kinase LNQ24_012130 PF02463 RecF/RecN/SMC N terminal domain LNQ24_012135 PF04355 SmpA / OmlA family LNQ24_012140 PF03658 RnfH family Ubiquitin LNQ24_012145 PF03364 Polyketide cyclase / dehydrase and lipid transport LNQ24_012150 PF01668 SmpB protein LNQ24_012195 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_012195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_012200 PF13953 PapC C-terminal domain LNQ24_012200 PF13954 PapC N-terminal domain LNQ24_012200 PF00577 Outer membrane usher protein LNQ24_012215 PF02796 Helix-turn-helix domain of resolvase LNQ24_012215 PF00239 Resolvase, N terminal domain LNQ24_012225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_012225 PF03466 LysR substrate binding domain LNQ24_012240 PF01527 Transposase LNQ24_012250 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LNQ24_012250 PF18413 Neuraminidase-like domain LNQ24_012250 PF18413 Neuraminidase-like domain LNQ24_012250 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LNQ24_012260 PF03534 Salmonella virulence plasmid 65kDa B protein LNQ24_012260 PF12255 Insecticide toxin TcdB middle/C-terminal region LNQ24_012260 PF12256 Insecticide toxin TcdB middle/N-terminal region LNQ24_012265 PF18807 Tripartite Tc toxins repeat LNQ24_012265 PF14431 YwqJ-like deaminase LNQ24_012295 PF00571 CBS domain LNQ24_012295 PF01380 SIS domain LNQ24_012300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNQ24_012300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNQ24_012310 PF02653 Branched-chain amino acid transport system / permease component LNQ24_012315 PF00005 ABC transporter LNQ24_012325 PF00561 alpha/beta hydrolase fold LNQ24_012330 PF03466 LysR substrate binding domain LNQ24_012330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_012335 PF02652 L-lactate permease LNQ24_012340 PF01070 FMN-dependent dehydrogenase LNQ24_012345 PF06039 Malate:quinone oxidoreductase (Mqo) LNQ24_012350 PF00313 'Cold-shock' DNA-binding domain LNQ24_012360 PF06711 Protein of unknown function (DUF1198) LNQ24_012365 PF09400 Protein of unknown function (DUF2002) LNQ24_012380 PF07972 NrdI Flavodoxin like LNQ24_012385 PF08343 Ribonucleotide reductase N-terminal LNQ24_012385 PF00317 Ribonucleotide reductase, all-alpha domain LNQ24_012385 PF02867 Ribonucleotide reductase, barrel domain LNQ24_012390 PF00268 Ribonucleotide reductase, small chain LNQ24_012395 PF00571 CBS domain LNQ24_012395 PF00005 ABC transporter LNQ24_012400 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_012405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LNQ24_012415 PF07690 Major Facilitator Superfamily LNQ24_012420 PF01047 MarR family LNQ24_012430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ24_012430 PF00529 HlyD membrane-fusion protein of T1SS LNQ24_012435 PF07690 Major Facilitator Superfamily LNQ24_012440 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNQ24_012440 PF00588 SpoU rRNA Methylase family LNQ24_012445 PF00085 Thioredoxin LNQ24_012450 PF03942 DTW domain LNQ24_012455 PF00583 Acetyltransferase (GNAT) family LNQ24_012455 PF13380 CoA binding domain LNQ24_012455 PF13607 Succinyl-CoA ligase like flavodoxin domain LNQ24_012460 PF13091 PLD-like domain LNQ24_012465 PF10043 Predicted periplasmic lipoprotein (DUF2279) LNQ24_012495 PF02861 Clp amino terminal domain, pathogenicity island component LNQ24_012495 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ24_012495 PF17871 AAA lid domain LNQ24_012495 PF07724 AAA domain (Cdc48 subfamily) LNQ24_012495 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_012500 PF02578 Multi-copper polyphenol oxidoreductase laccase LNQ24_012505 PF00849 RNA pseudouridylate synthase LNQ24_012505 PF01479 S4 domain LNQ24_012510 PF13525 Outer membrane lipoprotein LNQ24_012515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LNQ24_012525 PF01817 Chorismate mutase type II LNQ24_012525 PF00800 Prephenate dehydratase LNQ24_012530 PF02153 Prephenate dehydrogenase LNQ24_012530 PF01817 Chorismate mutase type II LNQ24_012535 PF00793 DAHP synthetase I family LNQ24_012540 PF04397 LytTr DNA-binding domain LNQ24_012540 PF00072 Response regulator receiver domain LNQ24_012545 PF03605 Anaerobic c4-dicarboxylate membrane transporter LNQ24_012550 PF04338 Protein of unknown function, DUF481 LNQ24_012555 PF01245 Ribosomal protein L19 LNQ24_012560 PF01746 tRNA (Guanine-1)-methyltransferase LNQ24_012565 PF05239 PRC-barrel domain LNQ24_012565 PF01782 RimM N-terminal domain LNQ24_012570 PF00886 Ribosomal protein S16 LNQ24_012575 PF02881 SRP54-type protein, helical bundle domain LNQ24_012575 PF00448 SRP54-type protein, GTPase domain LNQ24_012575 PF02978 Signal peptide binding domain LNQ24_012580 PF01578 Cytochrome C assembly protein LNQ24_012585 PF01595 Cyclin M transmembrane N-terminal domain LNQ24_012585 PF03471 Transporter associated domain LNQ24_012585 PF00571 CBS domain LNQ24_012590 PF02664 S-Ribosylhomocysteinase (LuxS) LNQ24_012595 PF04262 Glutamate-cysteine ligase LNQ24_012600 PF09335 SNARE associated Golgi protein LNQ24_012605 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_012610 PF01411 tRNA synthetases class II (A) LNQ24_012610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNQ24_012635 PF02599 Global regulator protein family LNQ24_012640 PF02272 DHHA1 domain LNQ24_012640 PF01411 tRNA synthetases class II (A) LNQ24_012640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNQ24_012645 PF02631 RecX family LNQ24_012650 PF00154 recA bacterial DNA recombination protein LNQ24_012655 PF02464 Competence-damaged protein LNQ24_012660 PF07690 Major Facilitator Superfamily LNQ24_012665 PF05683 Fumarase C-terminus LNQ24_012665 PF05681 Fumarate hydratase (Fumerase) LNQ24_012690 PF11356 Type II secretion system protein C LNQ24_012695 PF03958 Bacterial type II/III secretion system short domain LNQ24_012695 PF00263 Bacterial type II and III secretion system protein LNQ24_012700 PF00437 Type II/IV secretion system protein LNQ24_012705 PF00482 Type II secretion system (T2SS), protein F LNQ24_012710 PF07963 Prokaryotic N-terminal methylation motif LNQ24_012710 PF08334 Type II secretion system (T2SS), protein G LNQ24_012720 PF07963 Prokaryotic N-terminal methylation motif LNQ24_012720 PF02501 Type II secretion system (T2SS), protein I LNQ24_012725 PF07963 Prokaryotic N-terminal methylation motif LNQ24_012725 PF11612 Type II secretion system (T2SS), protein J LNQ24_012730 PF03934 Type II secretion system (T2SS), protein K LNQ24_012735 PF05134 Type II secretion system (T2SS), protein L LNQ24_012735 PF12693 GspL periplasmic domain LNQ24_012745 PF01478 Type IV leader peptidase family LNQ24_012745 PF06750 Bacterial Peptidase A24 N-terminal domain LNQ24_012750 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LNQ24_012755 PF18416 N-acetylglucosamine binding protein domain 2 LNQ24_012755 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ24_012775 PF00550 Phosphopantetheine attachment site LNQ24_012800 PF07720 Tetratricopeptide repeat LNQ24_012805 PF01312 FlhB HrpN YscU SpaS Family LNQ24_012810 PF01311 Bacterial export proteins, family 1 LNQ24_012815 PF01313 Bacterial export proteins, family 3 LNQ24_012820 PF00813 FliP family LNQ24_012825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ24_012840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ24_012840 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ24_012840 PF18269 T3SS EscN ATPase C-terminal domain LNQ24_012850 PF00771 FHIPEP family LNQ24_012875 PF05188 MutS domain II LNQ24_012875 PF05192 MutS domain III LNQ24_012875 PF05190 MutS family domain IV LNQ24_012875 PF01624 MutS domain I LNQ24_012875 PF00488 MutS domain V LNQ24_012880 PF00140 Sigma-70 factor, region 1.2 LNQ24_012880 PF04542 Sigma-70 region 2 LNQ24_012880 PF04539 Sigma-70 region 3 LNQ24_012880 PF04545 Sigma-70, region 4 LNQ24_012885 PF01476 LysM domain LNQ24_012885 PF01551 Peptidase family M23 LNQ24_012895 PF01975 Survival protein SurE LNQ24_012900 PF01142 tRNA pseudouridine synthase D (TruD) LNQ24_012905 PF02542 YgbB family LNQ24_012910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LNQ24_012915 PF04977 Septum formation initiator LNQ24_012920 PF12084 Protein of unknown function (DUF3561) LNQ24_012930 PF00009 Elongation factor Tu GTP binding domain LNQ24_012935 PF01507 Phosphoadenosine phosphosulfate reductase family LNQ24_012940 PF10414 Sirohaem synthase dimerisation region LNQ24_012940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ24_012940 PF14824 Sirohaem biosynthesis protein central LNQ24_012945 PF04389 Peptidase family M28 LNQ24_012960 PF01507 Phosphoadenosine phosphosulfate reductase family LNQ24_012965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LNQ24_012965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LNQ24_012970 PF00258 Flavodoxin LNQ24_012970 PF00667 FAD binding domain LNQ24_012970 PF00175 Oxidoreductase NAD-binding domain LNQ24_012975 PF01242 6-pyruvoyl tetrahydropterin synthase LNQ24_012980 PF04055 Radical SAM superfamily LNQ24_012985 PF03952 Enolase, N-terminal domain LNQ24_012985 PF00113 Enolase, C-terminal TIM barrel domain LNQ24_012990 PF00117 Glutamine amidotransferase class-I LNQ24_012990 PF06418 CTP synthase N-terminus LNQ24_012995 PF03819 MazG nucleotide pyrophosphohydrolase domain LNQ24_013000 PF02824 TGS domain LNQ24_013000 PF13291 ACT domain LNQ24_013000 PF04607 Region found in RelA / SpoT proteins LNQ24_013005 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ24_013005 PF01938 TRAM domain LNQ24_013010 PF00672 HAMP domain LNQ24_013010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNQ24_013010 PF01627 Hpt domain LNQ24_013010 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_013010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_013010 PF00072 Response regulator receiver domain LNQ24_013015 PF00595 PDZ domain LNQ24_013020 PF01966 HD domain LNQ24_013020 PF13286 Phosphohydrolase-associated domain LNQ24_013025 PF01048 Phosphorylase superfamily LNQ24_013030 PF01497 Periplasmic binding protein LNQ24_013035 PF03458 UPF0126 domain LNQ24_013040 PF01521 Iron-sulphur cluster biosynthesis LNQ24_013045 PF00654 Voltage gated chloride channel LNQ24_013050 PF00202 Aminotransferase class-III LNQ24_013055 PF14814 Bifunctional transglycosylase second domain LNQ24_013055 PF00912 Transglycosylase LNQ24_013055 PF00905 Penicillin binding protein transpeptidase domain LNQ24_013055 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LNQ24_013060 PF00270 DEAD/DEAH box helicase LNQ24_013060 PF04408 Helicase associated domain (HA2) LNQ24_013060 PF00271 Helicase conserved C-terminal domain LNQ24_013060 PF08482 ATP-dependent helicase C-terminal LNQ24_013065 PF02834 LigT like Phosphoesterase LNQ24_013070 PF17746 SfsA N-terminal OB domain LNQ24_013070 PF03749 Sugar fermentation stimulation protein RE domain LNQ24_013075 PF01258 Prokaryotic dksA/traR C4-type zinc finger LNQ24_013080 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ24_013085 PF01743 Poly A polymerase head domain LNQ24_013085 PF12626 Polymerase A arginine-rich C-terminus LNQ24_013085 PF12627 Probable RNA and SrmB- binding site of polymerase A LNQ24_013090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LNQ24_013095 PF02548 Ketopantoate hydroxymethyltransferase LNQ24_013100 PF02569 Pantoate-beta-alanine ligase LNQ24_013105 PF02261 Aspartate decarboxylase LNQ24_013110 PF01522 Polysaccharide deacetylase LNQ24_013115 PF01061 ABC-2 type transporter LNQ24_013120 PF00005 ABC transporter LNQ24_013125 PF00484 Carbonic anhydrase LNQ24_013130 PF00156 Phosphoribosyl transferase domain LNQ24_013135 PF07731 Multicopper oxidase LNQ24_013135 PF07732 Multicopper oxidase LNQ24_013135 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNQ24_013135 PF00394 Multicopper oxidase LNQ24_013140 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LNQ24_013145 PF17284 Spermidine synthase tetramerisation domain LNQ24_013150 PF02675 S-adenosylmethionine decarboxylase LNQ24_013155 PF00892 EamA-like transporter family LNQ24_013160 PF06062 Uncharacterised protein family (UPF0231) LNQ24_013165 PF11791 Aconitate B N-terminal domain LNQ24_013165 PF06434 Aconitate hydratase 2 N-terminus LNQ24_013165 PF00330 Aconitase family (aconitate hydratase) LNQ24_013175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ24_013175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_013180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNQ24_013180 PF02817 e3 binding domain LNQ24_013180 PF00364 Biotin-requiring enzyme LNQ24_013185 PF17831 Pyruvate dehydrogenase E1 component middle domain LNQ24_013185 PF00456 Transketolase, thiamine diphosphate binding domain LNQ24_013190 PF07729 FCD domain LNQ24_013190 PF00392 Bacterial regulatory proteins, gntR family LNQ24_013195 PF00324 Amino acid permease LNQ24_013200 PF17113 Regulatory signalling modulator protein AmpE LNQ24_013205 PF01510 N-acetylmuramoyl-L-alanine amidase LNQ24_013210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LNQ24_013210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LNQ24_013215 PF07963 Prokaryotic N-terminal methylation motif LNQ24_013220 PF00437 Type II/IV secretion system protein LNQ24_013220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNQ24_013225 PF00482 Type II secretion system (T2SS), protein F LNQ24_013230 PF00478 IMP dehydrogenase / GMP reductase domain LNQ24_013235 PF01121 Dephospho-CoA kinase LNQ24_013240 PF07072 Cell division protein LNQ24_013245 PF03884 DNA gyrase inhibitor YacG LNQ24_013250 PF00293 NUDIX domain LNQ24_013255 PF07517 SecA DEAD-like domain LNQ24_013255 PF01043 SecA preprotein cross-linking domain LNQ24_013255 PF07516 SecA Wing and Scaffold domain LNQ24_013255 PF02810 SEC-C motif LNQ24_013260 PF06558 Secretion monitor precursor protein (SecM) LNQ24_013270 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LNQ24_013275 PF00091 Tubulin/FtsZ family, GTPase domain LNQ24_013275 PF12327 FtsZ family, C-terminal domain LNQ24_013280 PF02491 SHS2 domain inserted in FTSA LNQ24_013285 PF08478 POTRA domain, FtsQ-type LNQ24_013285 PF03799 Cell division protein FtsQ LNQ24_013290 PF01820 D-ala D-ala ligase N-terminus LNQ24_013290 PF07478 D-ala D-ala ligase C-terminus LNQ24_013295 PF02875 Mur ligase family, glutamate ligase domain LNQ24_013295 PF01225 Mur ligase family, catalytic domain LNQ24_013295 PF08245 Mur ligase middle domain LNQ24_013300 PF04101 Glycosyltransferase family 28 C-terminal domain LNQ24_013300 PF03033 Glycosyltransferase family 28 N-terminal domain LNQ24_013305 PF01098 Cell cycle protein LNQ24_013310 PF02875 Mur ligase family, glutamate ligase domain LNQ24_013310 PF08245 Mur ligase middle domain LNQ24_013315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LNQ24_013315 PF00953 Glycosyl transferase family 4 LNQ24_013320 PF01225 Mur ligase family, catalytic domain LNQ24_013320 PF08245 Mur ligase middle domain LNQ24_013320 PF02875 Mur ligase family, glutamate ligase domain LNQ24_013325 PF01225 Mur ligase family, catalytic domain LNQ24_013325 PF02875 Mur ligase family, glutamate ligase domain LNQ24_013325 PF08245 Mur ligase middle domain LNQ24_013330 PF00905 Penicillin binding protein transpeptidase domain LNQ24_013330 PF03717 Penicillin-binding Protein dimerisation domain LNQ24_013335 PF04999 Cell division protein FtsL LNQ24_013340 PF01795 MraW methylase family LNQ24_013345 PF02381 MraZ protein, putative antitoxin-like LNQ24_013350 PF06610 L-alanine exporter LNQ24_013355 PF12323 Helix-turn-helix domain LNQ24_013355 PF07282 Putative transposase DNA-binding domain LNQ24_013355 PF01385 Probable transposase LNQ24_013360 PF01797 Transposase IS200 like LNQ24_013365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ24_013365 PF00356 Bacterial regulatory proteins, lacI family LNQ24_013370 PF10369 Small subunit of acetolactate synthase LNQ24_013375 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ24_013375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ24_013375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ24_013380 PF00501 AMP-binding enzyme LNQ24_013385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_013385 PF03466 LysR substrate binding domain LNQ24_013390 PF00682 HMGL-like LNQ24_013390 PF08502 LeuA allosteric (dimerisation) domain LNQ24_013395 PF00180 Isocitrate/isopropylmalate dehydrogenase LNQ24_013400 PF00330 Aconitase family (aconitate hydratase) LNQ24_013405 PF00694 Aconitase C-terminal domain LNQ24_013410 PF07690 Major Facilitator Superfamily LNQ24_013420 PF12793 Sugar transport-related sRNA regulator N-term LNQ24_013420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ24_013430 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_013435 PF00005 ABC transporter LNQ24_013440 PF09335 SNARE associated Golgi protein LNQ24_013445 PF03104 DNA polymerase family B, exonuclease domain LNQ24_013445 PF00136 DNA polymerase family B LNQ24_013450 PF18337 RapA N-terminal Tudor like domain LNQ24_013450 PF00271 Helicase conserved C-terminal domain LNQ24_013450 PF12137 RNA polymerase recycling family C-terminal LNQ24_013450 PF00176 SNF2 family N-terminal domain LNQ24_013450 PF18339 RapA N-terminal Tudor like domain 1 LNQ24_013455 PF00849 RNA pseudouridylate synthase LNQ24_013460 PF00226 DnaJ domain LNQ24_013460 PF05099 Tellurite resistance protein TerB LNQ24_013465 PF04453 LPS transport system D LNQ24_013465 PF03968 OstA-like protein LNQ24_013470 PF00639 PPIC-type PPIASE domain LNQ24_013470 PF09312 SurA N-terminal domain LNQ24_013475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LNQ24_013480 PF00398 Ribosomal RNA adenine dimethylase LNQ24_013485 PF04379 ApaG domain LNQ24_013490 PF00149 Calcineurin-like phosphoesterase LNQ24_013500 PF00186 Dihydrofolate reductase LNQ24_013505 PF12821 Threonine/Serine exporter, ThrE LNQ24_013510 PF06738 Putative threonine/serine exporter LNQ24_013515 PF01810 LysE type translocator LNQ24_013520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNQ24_013520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LNQ24_013520 PF02142 MGS-like domain LNQ24_013525 PF00117 Glutamine amidotransferase class-I LNQ24_013525 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LNQ24_013530 PF05173 Dihydrodipicolinate reductase, C-terminus LNQ24_013530 PF01113 Dihydrodipicolinate reductase, N-terminus LNQ24_013535 PF02401 LytB protein LNQ24_013540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ24_013545 PF01252 Signal peptidase (SPase) II LNQ24_013550 PF08264 Anticodon-binding domain of tRNA LNQ24_013550 PF00133 tRNA synthetases class I (I, L, M and V) LNQ24_013550 PF06827 Zinc finger found in FPG and IleRS LNQ24_013555 PF06574 FAD synthetase LNQ24_013555 PF01687 Riboflavin kinase LNQ24_013560 PF01649 Ribosomal protein S20 LNQ24_013565 PF03466 LysR substrate binding domain LNQ24_013565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_013570 PF06965 Na+/H+ antiporter 1 LNQ24_013575 PF00226 DnaJ domain LNQ24_013575 PF01556 DnaJ C terminal domain LNQ24_013575 PF00684 DnaJ central domain LNQ24_013580 PF00012 Hsp70 protein LNQ24_013585 PF01184 GPR1/FUN34/yaaH family LNQ24_013595 PF07690 Major Facilitator Superfamily LNQ24_013600 PF00994 Probable molybdopterin binding domain LNQ24_013605 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNQ24_013610 PF03883 Peroxide stress protein YaaA LNQ24_013615 PF14821 Threonine synthase N terminus LNQ24_013615 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_013620 PF00288 GHMP kinases N terminal domain LNQ24_013620 PF08544 GHMP kinases C terminal LNQ24_013625 PF00696 Amino acid kinase family LNQ24_013625 PF00742 Homoserine dehydrogenase LNQ24_013625 PF03447 Homoserine dehydrogenase, NAD binding domain LNQ24_013625 PF01842 ACT domain LNQ24_013625 PF13840 ACT domain LNQ24_013630 PF08254 Threonine leader peptide LNQ24_013640 PF00486 Transcriptional regulatory protein, C terminal LNQ24_013640 PF00072 Response regulator receiver domain LNQ24_013645 PF05981 CreA protein LNQ24_013650 PF12833 Helix-turn-helix domain LNQ24_013650 PF06445 GyrI-like small molecule binding domain LNQ24_013655 PF00300 Histidine phosphatase superfamily (branch 1) LNQ24_013660 PF01931 Protein of unknown function DUF84 LNQ24_013665 PF01371 Trp repressor protein LNQ24_013670 PF01464 Transglycosylase SLT domain LNQ24_013670 PF14718 Soluble lytic murein transglycosylase L domain LNQ24_013675 PF00689 Cation transporting ATPase, C-terminus LNQ24_013675 PF00690 Cation transporter/ATPase, N-terminus LNQ24_013690 PF00005 ABC transporter LNQ24_013690 PF12848 ABC transporter LNQ24_013695 PF01381 Helix-turn-helix LNQ24_013695 PF13521 AAA domain LNQ24_013700 PF18073 Rubredoxin metal binding domain LNQ24_013705 PF18429 Domain of unknown function (DUF5609) LNQ24_013710 PF10144 Bacterial virulence factor haemolysin LNQ24_013715 PF01048 Phosphorylase superfamily LNQ24_013720 PF01676 Metalloenzyme superfamily LNQ24_013725 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LNQ24_013725 PF02885 Glycosyl transferase family, helical bundle domain LNQ24_013725 PF00591 Glycosyl transferase family, a/b domain LNQ24_013730 PF01791 DeoC/LacD family aldolase LNQ24_013735 PF07670 Nucleoside recognition LNQ24_013735 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ24_013735 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ24_013740 PF01026 TatD related DNase LNQ24_013745 PF01734 Patatin-like phospholipase LNQ24_013750 PF07043 Protein of unknown function (DUF1328) LNQ24_013755 PF04972 BON domain LNQ24_013760 PF03144 Elongation factor Tu domain 2 LNQ24_013760 PF16658 Class II release factor RF3, C-terminal domain LNQ24_013760 PF00009 Elongation factor Tu GTP binding domain LNQ24_013765 PF00583 Acetyltransferase (GNAT) family LNQ24_013770 PF03603 DNA polymerase III psi subunit LNQ24_013775 PF08468 Methyltransferase small domain N-terminal LNQ24_013775 PF05175 Methyltransferase small domain LNQ24_013795 PF07256 Protein of unknown function (DUF1435) LNQ24_013805 PF00158 Sigma-54 interaction domain LNQ24_013805 PF00989 PAS fold LNQ24_013805 PF02954 Bacterial regulatory protein, Fis family LNQ24_013810 PF00391 PEP-utilising enzyme, mobile domain LNQ24_013810 PF05524 PEP-utilising enzyme, N-terminal LNQ24_013810 PF03610 PTS system fructose IIA component LNQ24_013810 PF00381 PTS HPr component phosphorylation site LNQ24_013815 PF02734 DAK2 domain LNQ24_013820 PF02733 Dak1 domain LNQ24_013825 PF00465 Iron-containing alcohol dehydrogenase LNQ24_013830 PF00873 AcrB/AcrD/AcrF family LNQ24_013835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ24_013850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ24_013855 PF10696 Protein of unknown function (DUF2501) LNQ24_013865 PF01116 Fructose-bisphosphate aldolase class-II LNQ24_013875 PF00884 Sulfatase LNQ24_013880 PF13186 Iron-sulfur cluster-binding domain LNQ24_013880 PF04055 Radical SAM superfamily LNQ24_013885 PF07470 Glycosyl Hydrolase Family 88 LNQ24_013895 PF04962 KduI/IolB family LNQ24_013900 PF01979 Amidohydrolase family LNQ24_013910 PF03613 PTS system mannose/fructose/sorbose family IID component LNQ24_013915 PF03609 PTS system sorbose-specific iic component LNQ24_013920 PF03830 PTS system sorbose subfamily IIB component LNQ24_013925 PF01380 SIS domain LNQ24_013930 PF08013 Tagatose 6 phosphate kinase LNQ24_013935 PF00455 DeoR C terminal sensor domain LNQ24_013935 PF08220 DeoR-like helix-turn-helix domain LNQ24_013940 PF00884 Sulfatase LNQ24_013945 PF09092 Lyase, N terminal LNQ24_013945 PF09093 Lyase, catalytic LNQ24_013945 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LNQ24_013945 PF02278 Polysaccharide lyase family 8, super-sandwich domain LNQ24_013960 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain LNQ24_013960 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LNQ24_013960 PF02278 Polysaccharide lyase family 8, super-sandwich domain LNQ24_013965 PF06178 Oligogalacturonate-specific porin protein (KdgM) LNQ24_013970 PF01344 Kelch motif LNQ24_014045 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LNQ24_014050 PF04221 RelB antitoxin LNQ24_014080 PF04851 Type III restriction enzyme, res subunit LNQ24_014080 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LNQ24_014080 PF00271 Helicase conserved C-terminal domain LNQ24_014080 PF08463 EcoEI R protein C-terminal LNQ24_014085 PF02384 N-6 DNA Methylase LNQ24_014085 PF12161 HsdM N-terminal domain LNQ24_014090 PF01420 Type I restriction modification DNA specificity domain LNQ24_014115 PF03739 Lipopolysaccharide export system permease LptF/LptG LNQ24_014120 PF03739 Lipopolysaccharide export system permease LptF/LptG LNQ24_014125 PF02789 Cytosol aminopeptidase family, N-terminal domain LNQ24_014125 PF00883 Cytosol aminopeptidase family, catalytic domain LNQ24_014130 PF04364 DNA polymerase III chi subunit, HolC LNQ24_014135 PF08264 Anticodon-binding domain of tRNA LNQ24_014135 PF10458 Valyl tRNA synthetase tRNA binding arm LNQ24_014135 PF00133 tRNA synthetases class I (I, L, M and V) LNQ24_014140 PF00583 Acetyltransferase (GNAT) family LNQ24_014145 PF06877 Regulator of ribonuclease activity B LNQ24_014150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNQ24_014150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNQ24_014155 PF13597 Anaerobic ribonucleoside-triphosphate reductase LNQ24_014155 PF03477 ATP cone domain LNQ24_014165 PF06754 Phosphonate metabolism protein PhnG LNQ24_014170 PF05845 Bacterial phosphonate metabolism protein (PhnH) LNQ24_014175 PF05861 Bacterial phosphonate metabolism protein (PhnI) LNQ24_014180 PF06007 Phosphonate metabolism protein PhnJ LNQ24_014185 PF00005 ABC transporter LNQ24_014190 PF00005 ABC transporter LNQ24_014195 PF07969 Amidohydrolase family LNQ24_014205 PF12706 Beta-lactamase superfamily domain LNQ24_014210 PF13460 NAD(P)H-binding LNQ24_014220 PF10940 Protein of unknown function (DUF2618) LNQ24_014225 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ24_014225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ24_014225 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ24_014230 PF13520 Amino acid permease LNQ24_014235 PF01541 GIY-YIG catalytic domain LNQ24_014240 PF13508 Acetyltransferase (GNAT) domain LNQ24_014245 PF02036 SCP-2 sterol transfer family LNQ24_014250 PF01136 Peptidase family U32 LNQ24_014255 PF01136 Peptidase family U32 LNQ24_014260 PF03313 Serine dehydratase alpha chain LNQ24_014270 PF00296 Luciferase-like monooxygenase LNQ24_014275 PF00271 Helicase conserved C-terminal domain LNQ24_014275 PF12343 Cold shock protein DEAD box A LNQ24_014275 PF00270 DEAD/DEAH box helicase LNQ24_014275 PF03880 DbpA RNA binding domain LNQ24_014280 PF07719 Tetratricopeptide repeat LNQ24_014280 PF13181 Tetratricopeptide repeat LNQ24_014285 PF00013 KH domain LNQ24_014285 PF01138 3' exoribonuclease family, domain 1 LNQ24_014285 PF03725 3' exoribonuclease family, domain 2 LNQ24_014285 PF00575 S1 RNA binding domain LNQ24_014285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LNQ24_014290 PF00312 Ribosomal protein S15 LNQ24_014295 PF09157 Pseudouridine synthase II TruB, C-terminal LNQ24_014295 PF16198 tRNA pseudouridylate synthase B C-terminal domain LNQ24_014295 PF01509 TruB family pseudouridylate synthase (N terminal domain) LNQ24_014300 PF02033 Ribosome-binding factor A LNQ24_014305 PF03144 Elongation factor Tu domain 2 LNQ24_014305 PF11987 Translation-initiation factor 2 LNQ24_014305 PF08364 Bacterial translation initiation factor IF-2 associated region LNQ24_014305 PF04760 Translation initiation factor IF-2, N-terminal region LNQ24_014305 PF00009 Elongation factor Tu GTP binding domain LNQ24_014310 PF08529 NusA N-terminal domain LNQ24_014310 PF00575 S1 RNA binding domain LNQ24_014310 PF13184 NusA-like KH domain LNQ24_014315 PF17384 RimP C-terminal SH3 domain LNQ24_014315 PF02576 RimP N-terminal domain LNQ24_014330 PF03840 Preprotein translocase SecG subunit LNQ24_014335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNQ24_014335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNQ24_014335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNQ24_014335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNQ24_014340 PF00809 Pterin binding enzyme LNQ24_014345 PF06480 FtsH Extracellular LNQ24_014345 PF17862 AAA+ lid domain LNQ24_014345 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_014345 PF01434 Peptidase family M41 LNQ24_014350 PF01728 FtsJ-like methyltransferase LNQ24_014355 PF01985 CRS1 / YhbY (CRM) domain LNQ24_014360 PF03449 Transcription elongation factor, N-terminal LNQ24_014360 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ24_014365 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LNQ24_014370 PF00072 Response regulator receiver domain LNQ24_014370 PF00486 Transcriptional regulatory protein, C terminal LNQ24_014375 PF00672 HAMP domain LNQ24_014375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_014375 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_014380 PF01018 GTP1/OBG LNQ24_014380 PF01926 50S ribosome-binding GTPase LNQ24_014385 PF00892 EamA-like transporter family LNQ24_014390 PF01016 Ribosomal L27 protein LNQ24_014395 PF00829 Ribosomal prokaryotic L21 protein LNQ24_014400 PF00348 Polyprenyl synthetase LNQ24_014415 PF13693 Winged helix-turn-helix DNA-binding LNQ24_014420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LNQ24_014420 PF00056 lactate/malate dehydrogenase, NAD binding domain LNQ24_014425 PF01316 Arginine repressor, DNA binding domain LNQ24_014425 PF02863 Arginine repressor, C-terminal domain LNQ24_014430 PF01225 Mur ligase family, catalytic domain LNQ24_014430 PF08245 Mur ligase middle domain LNQ24_014430 PF02875 Mur ligase family, glutamate ligase domain LNQ24_014435 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LNQ24_014440 PF00719 Inorganic pyrophosphatase LNQ24_014445 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LNQ24_014450 PF04357 TamB, inner membrane protein subunit of TAM complex LNQ24_014455 PF01103 Surface antigen LNQ24_014455 PF07244 Surface antigen variable number repeat LNQ24_014455 PF17243 POTRA domain TamA domain 1 LNQ24_014460 PF01625 Peptide methionine sulfoxide reductase LNQ24_014465 PF00571 CBS domain LNQ24_014465 PF03471 Transporter associated domain LNQ24_014465 PF01595 Cyclin M transmembrane N-terminal domain LNQ24_014470 PF06526 Protein of unknown function (DUF1107) LNQ24_014475 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LNQ24_014480 PF00459 Inositol monophosphatase family LNQ24_014485 PF00149 Calcineurin-like phosphoesterase LNQ24_014485 PF02872 5'-nucleotidase, C-terminal domain LNQ24_014490 PF04405 Domain of Unknown function (DUF542) LNQ24_014490 PF01814 Hemerythrin HHE cation binding domain LNQ24_014495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNQ24_014495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ24_014500 PF08525 Opacity-associated protein A N-terminal motif LNQ24_014500 PF04225 Opacity-associated protein A LysM-like domain LNQ24_014505 PF01281 Ribosomal protein L9, N-terminal domain LNQ24_014505 PF03948 Ribosomal protein L9, C-terminal domain LNQ24_014510 PF01084 Ribosomal protein S18 LNQ24_014515 PF00436 Single-strand binding protein family LNQ24_014520 PF01250 Ribosomal protein S6 LNQ24_014530 PF00326 Prolyl oligopeptidase family LNQ24_014550 PF00577 Outer membrane usher protein LNQ24_014550 PF13954 PapC N-terminal domain LNQ24_014550 PF13953 PapC C-terminal domain LNQ24_014555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_014575 PF00588 SpoU rRNA Methylase family LNQ24_014575 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNQ24_014580 PF00773 RNB domain LNQ24_014580 PF08206 Ribonuclease B OB domain LNQ24_014580 PF00575 S1 RNA binding domain LNQ24_014580 PF17876 Cold shock domain LNQ24_014580 PF08461 Ribonuclease R winged-helix domain LNQ24_014585 PF02082 Transcriptional regulator LNQ24_014590 PF00709 Adenylosuccinate synthetase LNQ24_014595 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LNQ24_014600 PF01145 SPFH domain / Band 7 family LNQ24_014605 PF12221 Bacterial membrane protein N terminal LNQ24_014605 PF01145 SPFH domain / Band 7 family LNQ24_014610 PF13167 GTP-binding GTPase N-terminal LNQ24_014610 PF01926 50S ribosome-binding GTPase LNQ24_014610 PF16360 GTP-binding GTPase Middle Region LNQ24_014615 PF17209 Hfq protein LNQ24_014625 PF01119 DNA mismatch repair protein, C-terminal domain LNQ24_014625 PF08676 MutL C terminal dimerisation domain LNQ24_014630 PF01520 N-acetylmuramoyl-L-alanine amidase LNQ24_014635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LNQ24_014640 PF03853 YjeF-related protein N-terminus LNQ24_014640 PF01256 Carbohydrate kinase LNQ24_014645 PF08331 Domain of unknown function (DUF1730) LNQ24_014665 PF00929 Exonuclease LNQ24_014670 PF03193 RsgA GTPase LNQ24_014675 PF02666 Phosphatidylserine decarboxylase LNQ24_014680 PF12794 Mechanosensitive ion channel inner membrane domain 1 LNQ24_014680 PF12795 Mechanosensitive ion channel porin domain LNQ24_014680 PF00924 Mechanosensitive ion channel LNQ24_014685 PF00152 tRNA synthetases class II (D, K and N) LNQ24_014690 PF02910 Fumarate reductase flavoprotein C-term LNQ24_014690 PF00890 FAD binding domain LNQ24_014695 PF13183 4Fe-4S dicluster domain LNQ24_014695 PF13085 2Fe-2S iron-sulfur cluster binding domain LNQ24_014700 PF02300 Fumarate reductase subunit C LNQ24_014705 PF02313 Fumarate reductase subunit D LNQ24_014710 PF08212 Lipocalin-like domain LNQ24_014715 PF00893 Small Multidrug Resistance protein LNQ24_014720 PF00419 Fimbrial protein LNQ24_014725 PF13954 PapC N-terminal domain LNQ24_014725 PF00577 Outer membrane usher protein LNQ24_014725 PF13953 PapC C-terminal domain LNQ24_014730 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_014730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_014740 PF00196 Bacterial regulatory proteins, luxR family LNQ24_014745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ24_014745 PF18416 N-acetylglucosamine binding protein domain 2 LNQ24_014750 PF09285 Elongation factor P, C-terminal LNQ24_014750 PF08207 Elongation factor P (EF-P) KOW-like domain LNQ24_014750 PF01132 Elongation factor P (EF-P) OB domain LNQ24_014755 PF04055 Radical SAM superfamily LNQ24_014760 PF13698 Domain of unknown function (DUF4156) LNQ24_014765 PF00118 TCP-1/cpn60 chaperonin family LNQ24_014770 PF00166 Chaperonin 10 Kd subunit LNQ24_014775 PF04186 FxsA cytoplasmic membrane protein LNQ24_014780 PF10415 Fumarase C C-terminus LNQ24_014780 PF00206 Lyase LNQ24_014785 PF03605 Anaerobic c4-dicarboxylate membrane transporter LNQ24_014790 PF03091 CutA1 divalent ion tolerance protein LNQ24_014795 PF02683 Cytochrome C biogenesis protein transmembrane region LNQ24_014795 PF11412 Disulphide bond corrector protein DsbC LNQ24_014820 PF02350 UDP-N-acetylglucosamine 2-epimerase LNQ24_014825 PF01370 NAD dependent epimerase/dehydratase family LNQ24_014830 PF08485 Polysaccharide biosynthesis protein C-terminal LNQ24_014830 PF02719 Polysaccharide biosynthesis protein LNQ24_014835 PF00977 Histidine biosynthesis protein LNQ24_014840 PF00117 Glutamine amidotransferase class-I LNQ24_014845 PF00795 Carbon-nitrogen hydrolase LNQ24_014845 PF02540 NAD synthase LNQ24_014870 PF13472 GDSL-like Lipase/Acylhydrolase family LNQ24_014870 PF02348 Cytidylyltransferase LNQ24_014880 PF00483 Nucleotidyl transferase LNQ24_014890 PF08666 SAF domain LNQ24_014890 PF03102 NeuB family LNQ24_014895 PF02350 UDP-N-acetylglucosamine 2-epimerase LNQ24_014900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNQ24_014905 PF02719 Polysaccharide biosynthesis protein LNQ24_014910 PF01206 Sulfurtransferase TusA LNQ24_014915 PF04143 Sulphur transport LNQ24_014925 PF16177 Acetyl-coenzyme A synthetase N-terminus LNQ24_014925 PF13193 AMP-binding enzyme C-terminal domain LNQ24_014925 PF00501 AMP-binding enzyme LNQ24_014930 PF04341 Protein of unknown function, DUF485 LNQ24_014935 PF00474 Sodium:solute symporter family LNQ24_014965 PF12724 Flavodoxin domain LNQ24_014970 PF02386 Cation transport protein LNQ24_014975 PF09186 Domain of unknown function (DUF1949) LNQ24_014975 PF01205 Uncharacterized protein family UPF0029 LNQ24_014980 PF00557 Metallopeptidase family M24 LNQ24_014985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNQ24_014985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNQ24_014985 PF00378 Enoyl-CoA hydratase/isomerase LNQ24_014990 PF02803 Thiolase, C-terminal domain LNQ24_014990 PF00108 Thiolase, N-terminal domain LNQ24_014995 PF00970 Oxidoreductase FAD-binding domain LNQ24_014995 PF00175 Oxidoreductase NAD-binding domain LNQ24_015000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LNQ24_015010 PF02357 Transcription termination factor nusG LNQ24_015015 PF00490 Delta-aminolevulinic acid dehydratase LNQ24_015020 PF01026 TatD related DNase LNQ24_015025 PF00902 Sec-independent protein translocase protein (TatC) LNQ24_015035 PF02416 mttA/Hcf106 family LNQ24_015040 PF03109 ABC1 family LNQ24_015045 PF02036 SCP-2 sterol transfer family LNQ24_015050 PF01209 ubiE/COQ5 methyltransferase family LNQ24_015055 PF02646 RmuC family LNQ24_015060 PF09335 SNARE associated Golgi protein LNQ24_015065 PF02554 Carbon starvation protein CstA LNQ24_015065 PF13722 5TM C-terminal transporter carbon starvation CstA LNQ24_015075 PF01048 Phosphorylase superfamily LNQ24_015080 PF01738 Dienelactone hydrolase family LNQ24_015085 PF01717 Cobalamin-independent synthase, Catalytic domain LNQ24_015085 PF08267 Cobalamin-independent synthase, N-terminal domain LNQ24_015090 PF03466 LysR substrate binding domain LNQ24_015090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_015095 PF00892 EamA-like transporter family LNQ24_015105 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ24_015110 PF00005 ABC transporter LNQ24_015110 PF17912 MalK OB fold domain LNQ24_015115 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_015120 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_015125 PF13416 Bacterial extracellular solute-binding protein LNQ24_015160 PF00005 ABC transporter LNQ24_015165 PF12399 Branched-chain amino acid ATP-binding cassette transporter LNQ24_015165 PF00005 ABC transporter LNQ24_015170 PF02653 Branched-chain amino acid transport system / permease component LNQ24_015170 PF11862 Domain of unknown function (DUF3382) LNQ24_015175 PF02653 Branched-chain amino acid transport system / permease component LNQ24_015180 PF13458 Periplasmic binding protein LNQ24_015185 PF12568 Acetyltransferase (GNAT) domain, PanZ LNQ24_015190 PF02595 Glycerate kinase family LNQ24_015195 PF02447 GntP family permease LNQ24_015200 PF13556 PucR C-terminal helix-turn-helix domain LNQ24_015200 PF17853 GGDEF-like domain LNQ24_015200 PF05651 Putative sugar diacid recognition LNQ24_015205 PF04545 Sigma-70, region 4 LNQ24_015205 PF04542 Sigma-70 region 2 LNQ24_015205 PF00140 Sigma-70 factor, region 1.2 LNQ24_015210 PF18075 FtsX extracellular domain LNQ24_015210 PF02687 FtsX-like permease family LNQ24_015215 PF00005 ABC transporter LNQ24_015220 PF02881 SRP54-type protein, helical bundle domain LNQ24_015220 PF00448 SRP54-type protein, GTPase domain LNQ24_015220 PF02881 SRP54-type protein, helical bundle domain LNQ24_015220 PF00448 SRP54-type protein, GTPase domain LNQ24_015230 PF06611 Protein of unknown function (DUF1145) LNQ24_015245 PF07947 YhhN family LNQ24_015250 PF00403 Heavy-metal-associated domain LNQ24_015255 PF01206 Sulfurtransferase TusA LNQ24_015260 PF02592 Putative vitamin uptake transporter LNQ24_015265 PF08786 DcrB LNQ24_015270 PF02754 Cysteine-rich domain LNQ24_015270 PF13183 4Fe-4S dicluster domain LNQ24_015275 PF00890 FAD binding domain LNQ24_015280 PF04324 BFD-like [2Fe-2S] binding domain LNQ24_015280 PF01266 FAD dependent oxidoreductase LNQ24_015290 PF07690 Major Facilitator Superfamily LNQ24_015295 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ24_015305 PF12146 Serine aminopeptidase, S33 LNQ24_015310 PF01810 LysE type translocator LNQ24_015315 PF09382 RQC domain LNQ24_015315 PF16124 RecQ zinc-binding LNQ24_015315 PF00570 HRDC domain LNQ24_015315 PF00271 Helicase conserved C-terminal domain LNQ24_015315 PF00270 DEAD/DEAH box helicase LNQ24_015320 PF02253 Phospholipase A1 LNQ24_015325 PF03061 Thioesterase superfamily LNQ24_015330 PF00892 EamA-like transporter family LNQ24_015335 PF01544 CorA-like Mg2+ transporter protein LNQ24_015345 PF09370 Phosphoenolpyruvate hydrolase-like LNQ24_015360 PF13361 UvrD-like helicase C-terminal domain LNQ24_015360 PF00580 UvrD/REP helicase N-terminal domain LNQ24_015365 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_015370 PF00589 Phage integrase family LNQ24_015370 PF02899 Phage integrase, N-terminal SAM-like domain LNQ24_015375 PF04340 Protein of unknown function, DUF484 LNQ24_015380 PF01678 Diaminopimelate epimerase LNQ24_015385 PF13627 Prokaryotic lipoprotein-attachment site LNQ24_015390 PF01491 Frataxin-like domain LNQ24_015395 PF12633 Adenylate cyclase NT domain LNQ24_015395 PF01295 Adenylate cyclase, class-I LNQ24_015400 PF03900 Porphobilinogen deaminase, C-terminal domain LNQ24_015400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LNQ24_015405 PF02602 Uroporphyrinogen-III synthase HemD LNQ24_015410 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LNQ24_015415 PF07219 HemY protein N-terminus LNQ24_015415 PF07719 Tetratricopeptide repeat LNQ24_015445 PF00324 Amino acid permease LNQ24_015450 PF03808 Glycosyl transferase WecB/TagA/CpsF family LNQ24_015455 PF06899 WzyE protein, O-antigen assembly polymerase LNQ24_015460 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LNQ24_015465 PF01943 Polysaccharide biosynthesis protein LNQ24_015470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNQ24_015480 PF00483 Nucleotidyl transferase LNQ24_015485 PF16363 GDP-mannose 4,6 dehydratase LNQ24_015490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNQ24_015490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNQ24_015490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNQ24_015495 PF02350 UDP-N-acetylglucosamine 2-epimerase LNQ24_015500 PF02706 Chain length determinant protein LNQ24_015505 PF00953 Glycosyl transferase family 4 LNQ24_015510 PF07497 Rho termination factor, RNA-binding domain LNQ24_015510 PF07498 Rho termination factor, N-terminal domain LNQ24_015510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ24_015515 PF00085 Thioredoxin LNQ24_015520 PF00271 Helicase conserved C-terminal domain LNQ24_015520 PF00270 DEAD/DEAH box helicase LNQ24_015525 PF02541 Ppx/GppA phosphatase family LNQ24_015530 PF13361 UvrD-like helicase C-terminal domain LNQ24_015530 PF00580 UvrD/REP helicase N-terminal domain LNQ24_015540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LNQ24_015540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LNQ24_015545 PF03466 LysR substrate binding domain LNQ24_015545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_015550 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ24_015550 PF18416 N-acetylglucosamine binding protein domain 2 LNQ24_015555 PF00585 C-terminal regulatory domain of Threonine dehydratase LNQ24_015555 PF00291 Pyridoxal-phosphate dependent enzyme LNQ24_015560 PF00920 Dehydratase family LNQ24_015565 PF01063 Amino-transferase class IV LNQ24_015575 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ24_015575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ24_015575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ24_015580 PF08046 IlvGEDA operon leader peptide LNQ24_015585 PF13335 Magnesium chelatase, subunit ChlI C-terminal LNQ24_015585 PF01078 Magnesium chelatase, subunit ChlI LNQ24_015590 PF04219 Protein of unknown function, DUF LNQ24_015595 PF03466 LysR substrate binding domain LNQ24_015595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_015635 PF01177 Asp/Glu/Hydantoin racemase LNQ24_015640 PF00593 TonB dependent receptor LNQ24_015640 PF07715 TonB-dependent Receptor Plug Domain LNQ24_015645 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ24_015650 PF07226 Protein of unknown function (DUF1422) LNQ24_015655 PF00440 Bacterial regulatory proteins, tetR family LNQ24_015660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ24_015660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_015665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_015665 PF03466 LysR substrate binding domain LNQ24_015670 PF00462 Glutaredoxin LNQ24_015670 PF08534 Redoxin LNQ24_015675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ24_015675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ24_015695 PF00529 HlyD membrane-fusion protein of T1SS LNQ24_015700 PF00005 ABC transporter LNQ24_015700 PF00664 ABC transporter transmembrane region LNQ24_015715 PF14698 Argininosuccinate lyase C-terminal LNQ24_015715 PF00206 Lyase LNQ24_015720 PF00764 Arginosuccinate synthase LNQ24_015725 PF00696 Amino acid kinase family LNQ24_015730 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ24_015730 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ24_015735 PF07687 Peptidase dimerisation domain LNQ24_015735 PF01546 Peptidase family M20/M25/M40 LNQ24_015740 PF00311 Phosphoenolpyruvate carboxylase LNQ24_015750 PF02219 Methylenetetrahydrofolate reductase LNQ24_015775 PF00696 Amino acid kinase family LNQ24_015775 PF00742 Homoserine dehydrogenase LNQ24_015775 PF03447 Homoserine dehydrogenase, NAD binding domain LNQ24_015780 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ24_015785 PF01340 Met Apo-repressor, MetJ LNQ24_015790 PF01197 Ribosomal protein L31 LNQ24_015795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LNQ24_015795 PF18074 Primosomal protein N C-terminal domain LNQ24_015795 PF17764 3′ DNA-binding domain (3′BD) LNQ24_015795 PF00271 Helicase conserved C-terminal domain LNQ24_015795 PF00270 DEAD/DEAH box helicase LNQ24_015800 PF00356 Bacterial regulatory proteins, lacI family LNQ24_015805 PF05036 Sporulation related domain LNQ24_015810 PF00227 Proteasome subunit LNQ24_015815 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ24_015815 PF00004 ATPase family associated with various cellular activities (AAA) LNQ24_015815 PF07724 AAA domain (Cdc48 subfamily) LNQ24_015820 PF01040 UbiA prenyltransferase family LNQ24_015825 PF03737 Aldolase/RraA LNQ24_015830 PF06005 Cell division protein ZapB LNQ24_015835 PF00230 Major intrinsic protein LNQ24_015840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNQ24_015840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNQ24_015845 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LNQ24_015850 PF07690 Major Facilitator Superfamily LNQ24_015855 PF00970 Oxidoreductase FAD-binding domain LNQ24_015855 PF00175 Oxidoreductase NAD-binding domain LNQ24_015860 PF05656 Protein of unknown function (DUF805) LNQ24_015865 PF07305 Protein of unknown function (DUF1454) LNQ24_015870 PF00121 Triosephosphate isomerase LNQ24_015880 PF00365 Phosphofructokinase LNQ24_015885 PF16916 Dimerisation domain of Zinc Transporter LNQ24_015885 PF01545 Cation efflux family LNQ24_015890 PF07813 LTXXQ motif family protein LNQ24_015895 PF00486 Transcriptional regulatory protein, C terminal LNQ24_015895 PF00072 Response regulator receiver domain LNQ24_015900 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_015900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_015900 PF00672 HAMP domain LNQ24_015900 PF16527 Two-component sensor protein CpxA, periplasmic domain LNQ24_015905 PF00588 SpoU rRNA Methylase family LNQ24_015910 PF06426 Serine acetyltransferase, N-terminal LNQ24_015910 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_015915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LNQ24_015915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LNQ24_015920 PF02556 Preprotein translocase subunit SecB LNQ24_015925 PF00462 Glutaredoxin LNQ24_015930 PF00581 Rhodanese-like domain LNQ24_015935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LNQ24_015935 PF01676 Metalloenzyme superfamily LNQ24_015940 PF01551 Peptidase family M23 LNQ24_015945 PF04748 Divergent polysaccharide deacetylase LNQ24_015950 PF00107 Zinc-binding dehydrogenase LNQ24_015950 PF08240 Alcohol dehydrogenase GroES-like domain LNQ24_015955 PF00155 Aminotransferase class I and II LNQ24_015960 PF01370 NAD dependent epimerase/dehydratase family LNQ24_015965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ24_015970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ24_015975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LNQ24_015980 PF00535 Glycosyl transferase family 2 LNQ24_015985 PF01467 Cytidylyltransferase-like LNQ24_015990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LNQ24_015990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LNQ24_015990 PF06827 Zinc finger found in FPG and IleRS LNQ24_015995 PF00471 Ribosomal protein L33 LNQ24_016000 PF00830 Ribosomal L28 family LNQ24_016005 PF04002 RadC-like JAB domain LNQ24_016010 PF04127 DNA / pantothenate metabolism flavoprotein LNQ24_016010 PF02441 Flavoprotein LNQ24_016015 PF00692 dUTPase LNQ24_016020 PF00440 Bacterial regulatory proteins, tetR family LNQ24_016025 PF00156 Phosphoribosyl transferase domain LNQ24_016030 PF01138 3' exoribonuclease family, domain 1 LNQ24_016030 PF03725 3' exoribonuclease family, domain 2 LNQ24_016035 PF03755 YicC-like family, N-terminal region LNQ24_016035 PF08340 Domain of unknown function (DUF1732) LNQ24_016045 PF03466 LysR substrate binding domain LNQ24_016045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ24_016050 PF00563 EAL domain LNQ24_016050 PF13426 PAS domain LNQ24_016050 PF00990 Diguanylate cyclase, GGDEF domain LNQ24_016055 PF00378 Enoyl-CoA hydratase/isomerase LNQ24_016060 PF07670 Nucleoside recognition LNQ24_016060 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ24_016060 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ24_016070 PF03458 UPF0126 domain LNQ24_016075 PF01653 NAD-dependent DNA ligase adenylation domain LNQ24_016075 PF03120 NAD-dependent DNA ligase OB-fold domain LNQ24_016080 PF00625 Guanylate kinase LNQ24_016085 PF01192 RNA polymerase Rpb6 LNQ24_016090 PF02824 TGS domain LNQ24_016090 PF04607 Region found in RelA / SpoT proteins LNQ24_016090 PF13291 ACT domain LNQ24_016095 PF12105 SpoU, rRNA methylase, C-terminal LNQ24_016095 PF00588 SpoU rRNA Methylase family LNQ24_016100 PF00270 DEAD/DEAH box helicase LNQ24_016100 PF00271 Helicase conserved C-terminal domain LNQ24_016100 PF17191 RecG wedge domain LNQ24_016105 PF03616 Sodium/glutamate symporter LNQ24_016110 PF00860 Permease family LNQ24_016115 PF05170 AsmA family LNQ24_016120 PF09500 Putative thioesterase (yiiD_Cterm) LNQ24_016120 PF00583 Acetyltransferase (GNAT) family LNQ24_016125 PF02580 D-Tyr-tRNA(Tyr) deacylase LNQ24_016130 PF03631 Virulence factor BrkB LNQ24_016135 PF13419 Haloacid dehalogenase-like hydrolase LNQ24_016140 PF00679 Elongation factor G C-terminus LNQ24_016140 PF00009 Elongation factor Tu GTP binding domain LNQ24_016140 PF03144 Elongation factor Tu domain 2 LNQ24_016145 PF00120 Glutamine synthetase, catalytic domain LNQ24_016145 PF03951 Glutamine synthetase, beta-Grasp domain LNQ24_016150 PF00989 PAS fold LNQ24_016150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ24_016150 PF00512 His Kinase A (phospho-acceptor) domain LNQ24_016155 PF02954 Bacterial regulatory protein, Fis family LNQ24_016155 PF00072 Response regulator receiver domain LNQ24_016155 PF00158 Sigma-54 interaction domain LNQ24_016160 PF04055 Radical SAM superfamily LNQ24_016160 PF06969 HemN C-terminal domain LNQ24_016165 PF04220 Der GTPase activator (YihI) LNQ24_016170 PF01926 50S ribosome-binding GTPase LNQ24_016175 PF01367 5'-3' exonuclease, C-terminal SAM fold LNQ24_016175 PF00476 DNA polymerase family A LNQ24_016175 PF01612 3'-5' exonuclease LNQ24_016175 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNQ24_016180 PF01323 DSBA-like thioredoxin domain LNQ24_016185 PF01636 Phosphotransferase enzyme family LNQ24_016190 PF06288 Protein of unknown function (DUF1040) LNQ24_016195 PF12804 MobA-like NTP transferase domain LNQ24_016200 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LNQ24_016225 PF00392 Bacterial regulatory proteins, gntR family LNQ24_016225 PF07729 FCD domain LNQ24_016230 PF00356 Bacterial regulatory proteins, lacI family LNQ24_016235 PF00294 pfkB family carbohydrate kinase LNQ24_016240 PF13407 Periplasmic binding protein domain LNQ24_016245 PF02653 Branched-chain amino acid transport system / permease component LNQ24_016250 PF00005 ABC transporter LNQ24_016255 PF05025 RbsD / FucU transport protein family LNQ24_016260 PF02705 K+ potassium transporter LNQ24_016265 PF12592 Protein of unknown function (DUF3763) LNQ24_016265 PF07728 AAA domain (dynein-related subfamily) LNQ24_016265 PF17868 AAA lid domain LNQ24_016270 PF05762 VWA domain containing CoxE-like protein LNQ24_016280 PF03590 Aspartate-ammonia ligase LNQ24_016285 PF01037 Lrp/AsnC ligand binding domain LNQ24_016290 PF00258 Flavodoxin LNQ24_016295 PF01134 Glucose inhibited division protein A LNQ24_016295 PF13932 GidA associated domain LNQ24_016300 PF02527 rRNA small subunit methyltransferase G LNQ24_016305 PF03899 ATP synthase I chain LNQ24_016310 PF00119 ATP synthase A chain LNQ24_016315 PF00137 ATP synthase subunit C LNQ24_016320 PF00430 ATP synthase B/B' CF(0) LNQ24_016325 PF00213 ATP synthase delta (OSCP) subunit LNQ24_016330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ24_016330 PF00306 ATP synthase alpha/beta chain, C terminal domain LNQ24_016330 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ24_016335 PF00231 ATP synthase LNQ24_016340 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ24_016340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ24_016345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LNQ24_016345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LNQ24_016350 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ24_016350 PF12804 MobA-like NTP transferase domain LNQ24_016355 PF01380 SIS domain LNQ24_016360 PF12849 PBP superfamily domain LNQ24_016365 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_016370 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_016375 PF00005 ABC transporter LNQ24_016380 PF01895 PhoU domain LNQ24_016385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ24_016390 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_016395 PF00528 Binding-protein-dependent transport system inner membrane component LNQ24_016400 PF00860 Permease family LNQ24_016405 PF00672 HAMP domain LNQ24_016405 PF02203 Tar ligand binding domain homologue LNQ24_016405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ24_016415 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ24_016415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ24_016420 PF13954 PapC N-terminal domain LNQ24_016420 PF13953 PapC C-terminal domain LNQ24_016420 PF00577 Outer membrane usher protein LNQ24_016430 PF01926 50S ribosome-binding GTPase LNQ24_016430 PF12631 MnmE helical domain LNQ24_016430 PF10396 GTP-binding protein TrmE N-terminus LNQ24_016435 PF02096 60Kd inner membrane protein LNQ24_016435 PF14849 YidC periplasmic domain LNQ24_016440 PF01809 Putative membrane protein insertion efficiency factor LNQ24_016445 PF00825 Ribonuclease P LNQ24_016450 PF00468 Ribosomal protein L34