locus-tag	class	description
LNQ24_000010	COG0592	DNA-directed DNA polymerase activity
LNQ24_000020	COG0187	DNA topoisomerase II activity
LNQ24_000025	COG0561	phosphatase activity
LNQ24_000030	COG0823	Involved in the tonB-independent uptake of proteins
LNQ24_000035	COG5645	(Lipo)protein
LNQ24_000050	COG0569	domain protein
LNQ24_000050	COG2985	domain, Protein
LNQ24_000055	COG3977	Valine--pyruvate aminotransferase
LNQ24_000060	COG2885	chlorophyll binding
LNQ24_000080	COG2818	Glycosylase
LNQ24_000130	COG2213	PTS system mannitol-specific
LNQ24_000130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LNQ24_000140	COG3722	fumarate hydratase activity
LNQ24_000150	COG2258	MOSC domain
LNQ24_000155	COG0840	transmembrane signaling receptor activity
LNQ24_000160	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LNQ24_000175	COG0437	4 iron, 4 sulfur cluster binding
LNQ24_000180	COG2864	formate dehydrogenase
LNQ24_000190	COG1921	L-seryl-tRNASec selenium transferase activity
LNQ24_000195	COG3276	selenocysteine insertion sequence binding
LNQ24_000200	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LNQ24_000210	COG3274	enterobacterial common antigen metabolic process
LNQ24_000245	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LNQ24_000250	COG2986	histidine ammonia-lyase
LNQ24_000270	COG2194	sulfuric ester hydrolase activity
LNQ24_000275	COG2197	response regulator
LNQ24_000280	COG3851	Histidine kinase
LNQ24_000285	COG2271	Major facilitator Superfamily
LNQ24_000295	COG0747	negative chemotaxis
LNQ24_000300	COG0601	transmembrane transport
LNQ24_000305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNQ24_000310	COG0444	Belongs to the ABC transporter superfamily
LNQ24_000315	COG4608	Belongs to the ABC transporter superfamily
LNQ24_000320	COG2194	sulfuric ester hydrolase activity
LNQ24_000345	COG1215	transferase activity, transferring glycosyl groups
LNQ24_000350	COG1215	transferase activity, transferring glycosyl groups
LNQ24_000355	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LNQ24_000360	COG3118	belongs to the thioredoxin family
LNQ24_000360	COG0457	Tetratricopeptide repeat
LNQ24_000365	COG2199	diguanylate cyclase activity
LNQ24_000365	COG2200	EAL domain
LNQ24_000370	COG1301	dicarboxylic acid transport
LNQ24_000375	COG0612	Peptidase, M16
LNQ24_000380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNQ24_000385	COG1942	4-Oxalocrotonate Tautomerase
LNQ24_000390	COG2200	EAL domain
LNQ24_000395	COG2134	cdp-diacylglycerol pyrophosphatase
LNQ24_000400	COG1295	ribonuclease BN
LNQ24_000410	COG1301	dicarboxylic acid transport
LNQ24_000415	COG0626	cystathionine gamma-synthase activity
LNQ24_000430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LNQ24_000435	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LNQ24_000440	COG0339	signal peptide processing
LNQ24_000445	COG0742	ribosomal rna small subunit methyltransferase
LNQ24_000455	COG0589	response to stress
LNQ24_000465	COG0306	phosphate transporter
LNQ24_000470	COG2081	HI0933 family
LNQ24_000545	COG1247	-acetyltransferase
LNQ24_000550	COG1741	Belongs to the pirin family
LNQ24_000555	COG1609	Transcriptional regulator
LNQ24_000560	COG2610	gluconate transmembrane transporter activity
LNQ24_000565	COG3265	gluconokinase activity
LNQ24_000570	COG2095	MarC family integral membrane protein
LNQ24_000575	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LNQ24_000580	COG3275	phosphorelay sensor kinase activity
LNQ24_000585	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LNQ24_000590	COG1523	belongs to the glycosyl hydrolase 13 family
LNQ24_000595	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LNQ24_000600	COG0297	glycogen (starch) synthase activity
LNQ24_000605	COG0058	SHG alpha-glucan phosphorylase activity
LNQ24_000610	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LNQ24_000615	COG1349	DNA-binding transcription factor activity
LNQ24_000620	COG0705	Rhomboid family
LNQ24_000630	COG2909	trisaccharide binding
LNQ24_000635	COG0058	SHG alpha-glucan phosphorylase activity
LNQ24_000640	COG1640	4-alpha-glucanotransferase
LNQ24_000650	COG1040	competence protein
LNQ24_000655	COG0596	Alpha beta hydrolase
LNQ24_000675	COG1918	ferrous iron import across plasma membrane
LNQ24_000680	COG2183	response to ionizing radiation
LNQ24_000705	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LNQ24_000720	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LNQ24_000730	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LNQ24_000735	COG1011	Hydrolase
LNQ24_000745	COG0494	nUDIX hydrolase
LNQ24_000750	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LNQ24_000775	COG4796	Type ii and iii secretion system protein
LNQ24_000780	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LNQ24_000800	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LNQ24_000810	COG0180	Tryptophanyl-tRNA synthetase
LNQ24_000830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LNQ24_000835	COG0402	S-adenosylhomocysteine deaminase activity
LNQ24_000840	COG0738	Major facilitator superfamily
LNQ24_000855	COG1609	Transcriptional regulator
LNQ24_000860	COG1486	melibiose metabolic process
LNQ24_000865	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNQ24_000880	COG1289	transmembrane transporter activity
LNQ24_000885	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LNQ24_000890	COG1765	OsmC-like protein
LNQ24_000915	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LNQ24_000920	COG3954	Phosphoribulokinase
LNQ24_000930	COG0429	hydrolase of the alpha beta-hydrolase fold
LNQ24_000945	COG1216	Glycosyl transferase, family 2
LNQ24_000950	COG0488	(ABC) transporter
LNQ24_000955	COG2249	NAD(P)H dehydrogenase (quinone) activity
LNQ24_000965	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LNQ24_000970	COG1047	Peptidyl-prolyl cis-trans
LNQ24_000980	COG0545	Peptidyl-prolyl cis-trans isomerase
LNQ24_000985	COG2964	Protein conserved in bacteria
LNQ24_000995	COG2923	Belongs to the DsrF TusC family
LNQ24_001000	COG2168	tRNA wobble position uridine thiolation
LNQ24_001005	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LNQ24_001010	COG0049	tRNA binding
LNQ24_001020	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LNQ24_001035	COG0051	transcription antitermination factor activity, RNA binding
LNQ24_001040	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LNQ24_001050	COG0089	rRNA binding
LNQ24_001055	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LNQ24_001060	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LNQ24_001065	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LNQ24_001075	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LNQ24_001080	COG0255	Belongs to the universal ribosomal protein uL29 family
LNQ24_001085	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LNQ24_001090	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LNQ24_001100	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LNQ24_001125	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LNQ24_001130	COG1841	ribosomal large subunit assembly
LNQ24_001135	COG0200	Binds to the 23S rRNA
LNQ24_001140	COG0201	protein transport
LNQ24_001145	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LNQ24_001150	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LNQ24_001160	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LNQ24_001170	COG0203	ribosomal protein L17
LNQ24_001175	COG0789	Transcriptional regulator
LNQ24_001180	COG3036	rescue of stalled ribosome
LNQ24_001185	COG1970	mechanosensitive ion channel activity
LNQ24_001195	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LNQ24_001195	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LNQ24_001200	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LNQ24_001205	COG0242	peptide deformylase activity
LNQ24_001210	COG0758	DNA mediated transformation
LNQ24_001215	COG2922	Belongs to the Smg family
LNQ24_001220	COG0551	DNA topoisomerase type I activity
LNQ24_001225	COG0009	L-threonylcarbamoyladenylate synthase
LNQ24_001235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LNQ24_001260	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LNQ24_001305	COG0250	Participates in transcription elongation, termination and antitermination
LNQ24_001310	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LNQ24_001320	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LNQ24_001325	COG0222	ribosome binding
LNQ24_001330	COG0085	RNA polymerase activity
LNQ24_001335	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNQ24_001345	COG2022	thiamine diphosphate biosynthetic process
LNQ24_001350	COG2104	thiamine diphosphate biosynthetic process
LNQ24_001355	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LNQ24_001370	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LNQ24_001375	COG2816	NAD+ diphosphatase activity
LNQ24_001380	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LNQ24_001385	COG1515	deoxyribonuclease V activity
LNQ24_001405	COG0151	Belongs to the GarS family
LNQ24_001410	COG0138	bifunctional purine biosynthesis protein purh
LNQ24_001455	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LNQ24_001490	COG0583	DNA-binding transcription factor activity
LNQ24_001570	COG1222	aaa ATPase
LNQ24_001595	COG3328	transposase activity
LNQ24_001610	COG0527	aspartate kinase activity
LNQ24_001620	COG3223	Belongs to the PsiE family
LNQ24_001625	COG3833	ABC-type maltose transport systems, permease component
LNQ24_001630	COG1175	transmembrane transport
LNQ24_001635	COG2182	Extracellular solute-binding protein
LNQ24_001650	COG4580	involved in the transport of maltose and maltodextrins
LNQ24_001670	COG2937	Belongs to the GPAT DAPAT family
LNQ24_001675	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LNQ24_001680	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LNQ24_001685	COG0735	belongs to the Fur family
LNQ24_001690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNQ24_001700	COG0604	alcohol dehydrogenase
LNQ24_001715	COG1448	Aminotransferase
LNQ24_001720	COG2315	Protein conserved in bacteria
LNQ24_001725	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LNQ24_001740	COG2252	PERMEase
LNQ24_001745	COG0025	NhaP-type Na H and K H
LNQ24_001750	COG0583	DNA-binding transcription factor activity
LNQ24_001755	COG1380	Effector of murein hydrolase LrgA
LNQ24_001760	COG1346	cytolysis
LNQ24_001770	COG1560	Kdo2-lipid A biosynthetic process
LNQ24_001780	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LNQ24_001785	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNQ24_001790	COG2264	protein methyltransferase activity
LNQ24_001795	COG4145	pantothenate transmembrane transporter activity
LNQ24_001800	COG3924	membrane
LNQ24_001805	COG0439	Biotin carboxylase
LNQ24_001810	COG0511	ligase activity, forming carbon-carbon bonds
LNQ24_001820	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LNQ24_001825	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LNQ24_001830	COG0604	alcohol dehydrogenase
LNQ24_001835	COG2200	EAL domain
LNQ24_001835	COG2199	diguanylate cyclase activity
LNQ24_001840	COG1077	Cell shape determining protein MreB Mrl
LNQ24_001845	COG1792	Involved in formation and maintenance of cell shape
LNQ24_001850	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LNQ24_001855	COG0424	maF-like protein
LNQ24_001865	COG3164	Protein of unknown function
LNQ24_001870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LNQ24_001875	COG0312	modulator of DNA gyrase
LNQ24_001880	COG0583	DNA-binding transcription factor activity
LNQ24_001890	COG1566	PFAM secretion protein HlyD family protein
LNQ24_001895	COG1289	transmembrane transporter activity
LNQ24_001905	COG4290	ribonuclease
LNQ24_001910	COG2732	(Barnase) inhibitor
LNQ24_001915	COG3028	Belongs to the UPF0307 family
LNQ24_001920	COG0312	modulator of DNA gyrase
LNQ24_001925	COG3783	Cytochrome b(562)
LNQ24_001930	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LNQ24_001940	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LNQ24_001950	COG1263	PTS System
LNQ24_001950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_001955	COG0366	Alpha amylase catalytic
LNQ24_001965	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LNQ24_001970	COG0540	Belongs to the ATCase OTCase family
LNQ24_001975	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LNQ24_001995	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LNQ24_002000	COG1137	ATPase activity
LNQ24_002005	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LNQ24_002010	COG3117	lipopolysaccharide transmembrane transporter activity
LNQ24_002015	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LNQ24_002020	COG0517	IMP dehydrogenase activity
LNQ24_002020	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LNQ24_002025	COG0530	calcium, potassium:sodium antiporter activity
LNQ24_002030	COG1127	ABC transporter
LNQ24_002035	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LNQ24_002040	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LNQ24_002045	COG2854	intermembrane phospholipid transfer
LNQ24_002050	COG3113	response to antibiotic
LNQ24_002055	COG5007	Belongs to the BolA IbaG family
LNQ24_002060	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNQ24_002070	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNQ24_002075	COG3105	Protein conserved in bacteria
LNQ24_002080	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LNQ24_002085	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LNQ24_002090	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LNQ24_002095	COG0625	glutathione transferase activity
LNQ24_002100	COG2969	positive regulation of protein catabolic process
LNQ24_002110	COG0493	'glutamate synthase
LNQ24_002115	COG0067	glutamate synthase
LNQ24_002115	COG0069	glutamate synthase activity
LNQ24_002115	COG0070	glutamate synthase
LNQ24_002120	COG1242	4 iron, 4 sulfur cluster binding
LNQ24_002130	COG0784	Response regulator, receiver
LNQ24_002130	COG2198	Histidine kinase
LNQ24_002130	COG5002	protein histidine kinase activity
LNQ24_002135	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LNQ24_002140	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LNQ24_002145	COG2823	Periplasmic or secreted lipoprotein
LNQ24_002150	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LNQ24_002165	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LNQ24_002180	COG1741	Belongs to the pirin family
LNQ24_002185	COG0583	DNA-binding transcription factor activity
LNQ24_002190	COG2259	Doxx family
LNQ24_002200	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
LNQ24_002205	COG4575	ribosome binding
LNQ24_002220	COG0586	Pfam SNARE associated Golgi protein
LNQ24_002235	COG2271	Major facilitator Superfamily
LNQ24_002250	COG2721	sulfolactate sulfo-lyase activity
LNQ24_002260	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LNQ24_002265	COG0861	Integral membrane protein TerC family
LNQ24_002270	COG0673	inositol 2-dehydrogenase activity
LNQ24_002275	COG1451	nucleotide metabolic process
LNQ24_002290	COG0446	pyridine nucleotide-disulphide oxidoreductase
LNQ24_002290	COG1902	pentaerythritol trinitrate reductase activity
LNQ24_002295	COG2831	hemolysin activation secretion protein
LNQ24_002305	COG5444	nuclease activity
LNQ24_002340	COG0463	Glycosyl transferase, family 2
LNQ24_002370	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_002400	COG0358	DNA primase activity
LNQ24_002405	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LNQ24_002410	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LNQ24_002415	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LNQ24_002420	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LNQ24_002425	COG1968	undecaprenyl-diphosphatase activity
LNQ24_002430	COG0617	tRNA 3'-terminal CCA addition
LNQ24_002435	COG4991	sh3 domain protein
LNQ24_002440	COG3025	triphosphatase activity
LNQ24_002450	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LNQ24_002450	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LNQ24_002465	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LNQ24_002470	COG3384	dioxygenase
LNQ24_002475	COG0754	glutathionylspermidine amidase activity
LNQ24_002480	COG5463	Belongs to the UPF0441 family
LNQ24_002485	COG1538	Outer membrane efflux protein
LNQ24_002490	COG0494	nUDIX hydrolase
LNQ24_002495	COG3151	Protein conserved in bacteria
LNQ24_002500	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LNQ24_002505	COG3150	esterase
LNQ24_002510	COG0187	DNA topoisomerase II activity
LNQ24_002515	COG0583	DNA-binding transcription factor activity
LNQ24_002520	COG2249	NAD(P)H dehydrogenase (quinone) activity
LNQ24_002525	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNQ24_002535	COG2132	Multicopper oxidase
LNQ24_002545	COG0656	L-ascorbic acid biosynthetic process
LNQ24_002550	COG1979	alcohol dehydrogenase
LNQ24_002555	COG2207	Transcriptional regulator
LNQ24_002560	COG0586	Pfam SNARE associated Golgi protein
LNQ24_002565	COG0626	cystathionine gamma-synthase activity
LNQ24_002570	COG0811	peptide transport
LNQ24_002575	COG0848	biopolymer transport protein
LNQ24_002625	COG4964	Belongs to the GSP D family
LNQ24_002650	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LNQ24_002655	COG4774	siderophore transport
LNQ24_002665	COG3251	PFAM MbtH domain protein
LNQ24_002670	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LNQ24_002680	COG1120	ATPase activity
LNQ24_002685	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNQ24_002690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNQ24_002700	COG4592	Periplasmic binding protein
LNQ24_002705	COG1169	isochorismate synthase
LNQ24_002710	COG1021	2,3-dihydroxybenzoate-AMP ligase
LNQ24_002715	COG1535	isochorismatase
LNQ24_002715	COG3433	isochorismatase activity
LNQ24_002720	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_002735	COG0814	amino acid
LNQ24_002740	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNQ24_002745	COG1882	Formate acetyltransferase
LNQ24_002750	COG1105	Belongs to the carbohydrate kinase PfkB family
LNQ24_002790	COG0741	lytic transglycosylase activity
LNQ24_002795	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LNQ24_002800	COG1194	a g-specific adenine glycosylase
LNQ24_002810	COG3171	Protein conserved in bacteria
LNQ24_002825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LNQ24_002830	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LNQ24_002835	COG1872	DUF167
LNQ24_002840	COG0762	integral membrane protein
LNQ24_002845	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNQ24_002850	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LNQ24_002855	COG2805	Type II/IV secretion system protein
LNQ24_002865	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LNQ24_002870	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LNQ24_002875	COG1678	Uncharacterized ACR, COG1678
LNQ24_002880	COG0189	ligase activity
LNQ24_002885	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LNQ24_002890	COG2356	endonuclease I
LNQ24_002895	COG3091	SprT-like family
LNQ24_002900	COG0640	Transcriptional regulator
LNQ24_002915	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LNQ24_002920	COG1166	arginine decarboxylase activity
LNQ24_002930	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LNQ24_002935	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LNQ24_002940	COG0126	phosphoglycerate kinase activity
LNQ24_002945	COG0191	fructose-bisphosphate aldolase activity
LNQ24_002955	COG1279	arginine transmembrane transporter activity
LNQ24_002970	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LNQ24_002975	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LNQ24_002980	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LNQ24_002990	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LNQ24_003000	COG0006	proline dipeptidase activity
LNQ24_003005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LNQ24_003010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LNQ24_003015	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LNQ24_003035	COG1272	protein, Hemolysin III
LNQ24_003045	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LNQ24_003055	COG0716	FMN binding
LNQ24_003060	COG4974	Belongs to the 'phage' integrase family
LNQ24_003065	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LNQ24_003070	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LNQ24_003080	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LNQ24_003090	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LNQ24_003095	COG1127	ABC transporter
LNQ24_003125	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LNQ24_003135	COG2165	general secretion pathway protein
LNQ24_003195	COG0583	DNA-binding transcription factor activity
LNQ24_003200	COG0583	DNA-binding transcription factor activity
LNQ24_003210	COG1609	Transcriptional regulator
LNQ24_003215	COG0318	PFAM AMP-dependent synthetase and ligase
LNQ24_003215	COG0204	Acyl-transferase
LNQ24_003220	COG0477	Major facilitator Superfamily
LNQ24_003225	COG0667	Aldo Keto reductase
LNQ24_003230	COG0861	Integral membrane protein TerC family
LNQ24_003235	COG3066	DNA modification
LNQ24_003245	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
LNQ24_003250	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LNQ24_003275	COG4967	type IV pilus modification protein PilV
LNQ24_003280	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LNQ24_003285	COG1025	Belongs to the peptidase M16 family
LNQ24_003290	COG1074	ATP-dependent DNA helicase activity
LNQ24_003295	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LNQ24_003300	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LNQ24_003300	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LNQ24_003305	COG0860	N-Acetylmuramoyl-L-alanine amidase
LNQ24_003325	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LNQ24_003330	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LNQ24_003335	COG2166	iron-sulfur cluster assembly
LNQ24_003340	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LNQ24_003350	COG0583	DNA-binding transcription factor activity
LNQ24_003355	COG2363	Small membrane protein
LNQ24_003360	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LNQ24_003370	COG1611	Belongs to the LOG family
LNQ24_003385	COG3098	single-species biofilm formation
LNQ24_003390	COG0564	pseudouridine synthase activity
LNQ24_003405	COG2171	N-acyltransferase activity
LNQ24_003410	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LNQ24_003430	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LNQ24_003435	COG0528	UMP kinase activity
LNQ24_003455	COG0575	Belongs to the CDS family
LNQ24_003460	COG0750	zinc metalloprotease
LNQ24_003470	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
LNQ24_003475	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LNQ24_003495	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNQ24_003500	COG0587	DNA-directed DNA polymerase activity
LNQ24_003505	COG0825	malonyl-CoA metabolic process
LNQ24_003520	COG0346	lactoylglutathione lyase activity
LNQ24_003535	COG4568	rho-dependent transcription termination
LNQ24_003545	COG4681	YaeQ
LNQ24_003555	COG3015	lipoprotein NlpE involved in copper resistance
LNQ24_003560	COG0442	prolyl-tRNA aminoacylation
LNQ24_003565	COG1720	tRNA m6t6A37 methyltransferase activity
LNQ24_003575	COG1464	Belongs to the NlpA lipoprotein family
LNQ24_003580	COG2011	ABC-type metal ion transport system permease component
LNQ24_003590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LNQ24_003620	COG3021	interspecies interaction between organisms
LNQ24_003625	COG1388	LysM domain
LNQ24_003625	COG0741	lytic transglycosylase activity
LNQ24_003635	COG2226	methyltransferase
LNQ24_003645	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LNQ24_003655	COG1960	acyl-CoA dehydrogenase activity
LNQ24_003660	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LNQ24_003665	COG0121	glutamine amidotransferase
LNQ24_003670	COG3034	peptidoglycan biosynthetic process
LNQ24_003680	COG1805	sodium ion transport
LNQ24_003685	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LNQ24_003690	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LNQ24_003695	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LNQ24_003705	COG1477	protein flavinylation
LNQ24_003710	COG2991	Protein conserved in bacteria
LNQ24_003720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNQ24_003725	COG2195	Cleaves the N-terminal amino acid of tripeptides
LNQ24_003730	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LNQ24_003735	COG1073	alpha beta
LNQ24_003750	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LNQ24_003785	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LNQ24_003805	COG4126	flavin adenine dinucleotide binding
LNQ24_003815	COG2974	May be involved in recombination
LNQ24_003820	COG1940	carbohydrate kinase activity
LNQ24_003825	COG0419	ATPase involved in DNA repair
LNQ24_003830	COG0420	3'-5' exonuclease activity
LNQ24_003835	COG0745	RESPONSE REGULATOR receiver
LNQ24_003840	COG5002	protein histidine kinase activity
LNQ24_003855	COG1113	amino acid transport
LNQ24_003860	COG0366	Alpha amylase catalytic
LNQ24_003865	COG0300	oxidoreductase activity
LNQ24_003870	COG0450	alkyl hydroperoxide reductase
LNQ24_003875	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LNQ24_003890	COG1862	Preprotein translocase
LNQ24_003895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LNQ24_003900	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LNQ24_003905	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LNQ24_003910	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LNQ24_003910	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LNQ24_003915	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LNQ24_003925	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LNQ24_003930	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LNQ24_003935	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LNQ24_003940	COG0142	geranyltranstransferase activity
LNQ24_003975	COG0693	protein deglycase activity
LNQ24_003980	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LNQ24_003985	COG1666	GTP binding
LNQ24_003990	COG2814	Major facilitator Superfamily
LNQ24_004000	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LNQ24_004005	COG1845	cytochrome c oxidase, subunit III
LNQ24_004010	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LNQ24_004015	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LNQ24_004025	COG2223	nitrite transmembrane transporter activity
LNQ24_004030	COG3056	Lipoprotein
LNQ24_004035	COG0271	Belongs to the BolA IbaG family
LNQ24_004045	COG0740	serine-type endopeptidase activity
LNQ24_004050	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LNQ24_004055	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LNQ24_004060	COG0776	regulation of translation
LNQ24_004065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LNQ24_004070	COG1555	photosystem II stabilization
LNQ24_004075	COG0824	Thioesterase
LNQ24_004080	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LNQ24_004085	COG4533	DNA binding
LNQ24_004100	COG1522	sequence-specific DNA binding
LNQ24_004105	COG1132	(ABC) transporter
LNQ24_004110	COG1132	(ABC) transporter
LNQ24_004115	COG0347	Belongs to the P(II) protein family
LNQ24_004120	COG0004	ammonium transporteR
LNQ24_004125	COG1946	Acyl-CoA thioesterase
LNQ24_004130	COG3695	enzyme binding
LNQ24_004155	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LNQ24_004160	COG0254	rRNA binding
LNQ24_004165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNQ24_004170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNQ24_004175	COG1309	transcriptional regulator
LNQ24_004180	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LNQ24_004185	COG1196	nuclear chromosome segregation
LNQ24_004185	COG3264	Mechanosensitive ion channel
LNQ24_004200	COG2832	Protein of unknown function (DUF454)
LNQ24_004205	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LNQ24_004245	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LNQ24_004250	COG0326	Molecular chaperone. Has ATPase activity
LNQ24_004265	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LNQ24_004270	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNQ24_004275	COG4651	solute:proton antiporter activity
LNQ24_004275	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LNQ24_004280	COG0737	Belongs to the 5'-nucleotidase family
LNQ24_004285	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LNQ24_004290	COG3735	TraB family
LNQ24_004295	COG2217	Heavy metal translocating P-type atpase
LNQ24_004300	COG0789	Transcriptional regulator
LNQ24_004305	COG1585	Membrane protein implicated in regulation of membrane protease activity
LNQ24_004310	COG0330	HflC and HflK could
LNQ24_004315	COG3118	belongs to the thioredoxin family
LNQ24_004320	COG0300	oxidoreductase activity
LNQ24_004325	COG2755	lipolytic protein G-D-S-L family
LNQ24_004330	COG4181	ATPase activity
LNQ24_004335	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LNQ24_004340	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LNQ24_004345	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LNQ24_004350	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LNQ24_004355	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNQ24_004380	COG3188	usher protein
LNQ24_004385	COG3121	Chaperone
LNQ24_004415	COG2501	S4 domain
LNQ24_004420	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LNQ24_004430	COG0582	viral genome integration into host DNA
LNQ24_004480	COG3596	GTP binding
LNQ24_004485	COG2378	regulation of single-species biofilm formation
LNQ24_004515	COG2003	Belongs to the UPF0758 family
LNQ24_004540	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LNQ24_004545	COG1393	Belongs to the ArsC family
LNQ24_004555	COG1022	Amp-dependent synthetase and ligase
LNQ24_004580	COG3038	cytochrome b561
LNQ24_004610	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LNQ24_004620	COG1215	transferase activity, transferring glycosyl groups
LNQ24_004640	COG3250	beta-galactosidase activity
LNQ24_004655	COG1309	transcriptional regulator
LNQ24_004685	COG2197	response regulator
LNQ24_004690	COG1278	Cold shock
LNQ24_004710	COG3706	GGDEF domain
LNQ24_004720	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LNQ24_004730	COG2921	Belongs to the UPF0250 family
LNQ24_004735	COG1686	Belongs to the peptidase S11 family
LNQ24_004740	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LNQ24_004745	COG0772	Belongs to the SEDS family
LNQ24_004750	COG0768	penicillin binding
LNQ24_004755	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LNQ24_004760	COG0799	negative regulation of ribosome biogenesis
LNQ24_004765	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LNQ24_004770	COG1466	dna polymerase III delta subunit
LNQ24_004775	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LNQ24_004785	COG2888	peptidyl-tyrosine sulfation
LNQ24_004790	COG1126	abc transporter atp-binding protein
LNQ24_004795	COG0765	amino acid transport
LNQ24_004800	COG0765	amino acid transport
LNQ24_004810	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LNQ24_004815	COG4535	Mg2 and Co2 transporter CorC
LNQ24_004820	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LNQ24_004825	COG1702	phosphate starvation-inducible protein PhoH
LNQ24_004830	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LNQ24_004835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LNQ24_004870	COG0367	asparagine synthase
LNQ24_004875	COG0647	UMP catabolic process
LNQ24_004880	COG1940	carbohydrate kinase activity
LNQ24_004880	COG1846	Transcriptional regulator
LNQ24_004885	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LNQ24_004895	COG2190	(PTS) system
LNQ24_004895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_004895	COG1263	PTS System
LNQ24_004920	COG0735	belongs to the Fur family
LNQ24_004930	COG0840	transmembrane signaling receptor activity
LNQ24_004940	COG0596	Alpha beta hydrolase
LNQ24_004945	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LNQ24_004950	COG0033	Phosphoglucomutase
LNQ24_004960	COG0745	RESPONSE REGULATOR receiver
LNQ24_004965	COG2205	protein histidine kinase activity
LNQ24_004970	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LNQ24_004975	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LNQ24_004995	COG3272	Protein of unknown function (DUF1722)
LNQ24_005000	COG0415	Belongs to the DNA photolyase family
LNQ24_005005	COG5212	phosphodiesterase
LNQ24_005010	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LNQ24_005015	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LNQ24_005020	COG1984	allophanate hydrolase subunit 2
LNQ24_005025	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LNQ24_005060	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LNQ24_005065	COG1053	succinate dehydrogenase
LNQ24_005070	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LNQ24_005075	COG0567	Dehydrogenase, E1 component
LNQ24_005080	COG0508	dehydrogenase complex catalyzes the overall conversion of
LNQ24_005085	COG0045	succinate-CoA ligase (ADP-forming) activity
LNQ24_005090	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LNQ24_005095	COG0737	Belongs to the 5'-nucleotidase family
LNQ24_005100	COG1271	oxidase subunit
LNQ24_005105	COG1294	oxidase, subunit
LNQ24_005110	COG4890	Cyd operon protein YbgT
LNQ24_005115	COG3790	cyd operon protein YbgE
LNQ24_005120	COG0824	Thioesterase
LNQ24_005125	COG0811	peptide transport
LNQ24_005130	COG0848	biopolymer transport protein
LNQ24_005135	COG3064	Membrane
LNQ24_005135	COG3064	Membrane
LNQ24_005140	COG0823	Involved in the tonB-independent uptake of proteins
LNQ24_005145	COG2885	chlorophyll binding
LNQ24_005150	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LNQ24_005180	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LNQ24_005190	COG2205	protein histidine kinase activity
LNQ24_005190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_005200	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LNQ24_005205	COG0588	phosphoglycerate mutase activity
LNQ24_005215	COG2017	converts alpha-aldose to the beta-anomer
LNQ24_005225	COG1085	galactose-1-phosphate uridylyltransferase
LNQ24_005230	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LNQ24_005245	COG3585	molybdate ion transport
LNQ24_005245	COG2005	Transcriptional regulator
LNQ24_005255	COG0725	ABC transporter, periplasmic molybdate-binding protein
LNQ24_005260	COG4149	molybdate abc transporter
LNQ24_005270	COG0561	phosphatase activity
LNQ24_005275	COG2706	6-phosphogluconolactonase activity
LNQ24_005290	COG0156	8-amino-7-oxononanoate synthase activity
LNQ24_005295	COG2226	methyltransferase
LNQ24_005310	COG0556	nucleotide-excision repair
LNQ24_005315	COG4628	conserved protein (DUF2132)
LNQ24_005330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNQ24_005335	COG1120	ATPase activity
LNQ24_005340	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LNQ24_005345	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LNQ24_005355	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LNQ24_005360	COG0314	molybdopterin synthase activity
LNQ24_005365	COG0670	Belongs to the BI1 family
LNQ24_005370	COG0842	Transport permease protein
LNQ24_005375	COG0842	Transport permease protein
LNQ24_005380	COG1131	(ABC) transporter
LNQ24_005385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNQ24_005390	COG1309	transcriptional regulator
LNQ24_005395	COG0513	Belongs to the DEAD box helicase family
LNQ24_005400	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNQ24_005410	COG1686	Belongs to the peptidase S11 family
LNQ24_005415	COG0277	FAD linked oxidase domain protein
LNQ24_005435	COG2261	transglycosylase associated protein
LNQ24_005445	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LNQ24_005455	COG3639	organic phosphonate transmembrane transporter activity
LNQ24_005460	COG4807	Protein conserved in bacteria
LNQ24_005465	COG2897	thiosulfate sulfurtransferase activity
LNQ24_005470	COG1732	Glycine betaine
LNQ24_005475	COG1174	glycine betaine transport
LNQ24_005480	COG1125	glycine betaine transport
LNQ24_005485	COG1174	glycine betaine transport
LNQ24_005490	COG0531	amino acid
LNQ24_005495	COG1982	Orn Lys Arg decarboxylase major
LNQ24_005505	COG0697	spore germination
LNQ24_005520	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LNQ24_005525	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LNQ24_005530	COG1126	abc transporter atp-binding protein
LNQ24_005535	COG0765	amino acid transport
LNQ24_005540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_005560	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LNQ24_005565	COG2239	Acts as a magnesium transporter
LNQ24_005570	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNQ24_005575	COG0488	(ABC) transporter
LNQ24_005580	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LNQ24_005585	COG0303	'Molybdopterin
LNQ24_005605	COG0583	DNA-binding transcription factor activity
LNQ24_005610	COG0477	Major facilitator Superfamily
LNQ24_005615	COG0302	gtp cyclohydrolase
LNQ24_005620	COG2311	Membrane
LNQ24_005645	COG2949	membrane
LNQ24_005650	COG0281	malic enzyme
LNQ24_005660	COG0583	DNA-binding transcription factor activity
LNQ24_005670	COG1346	cytolysis
LNQ24_005675	COG1380	Effector of murein hydrolase LrgA
LNQ24_005685	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LNQ24_005685	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LNQ24_005690	COG0489	protein tyrosine kinase activity
LNQ24_005695	COG0572	uridine kinase
LNQ24_005700	COG0717	Belongs to the dCTP deaminase family
LNQ24_005705	COG2982	Protein involved in outer membrane biogenesis
LNQ24_005710	COG3069	C4-dicarboxylate transmembrane transporter activity
LNQ24_005715	COG1253	flavin adenine dinucleotide binding
LNQ24_005720	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LNQ24_005725	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LNQ24_005730	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LNQ24_005740	COG0140	phosphoribosyl-ATP diphosphatase activity
LNQ24_005740	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LNQ24_005750	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LNQ24_005760	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LNQ24_005760	COG0131	Imidazoleglycerol-phosphate dehydratase
LNQ24_005765	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LNQ24_005770	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LNQ24_005785	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LNQ24_005790	COG0625	glutathione transferase activity
LNQ24_005805	COG0626	cystathionine gamma-synthase activity
LNQ24_005815	COG1686	Belongs to the peptidase S11 family
LNQ24_005820	COG1760	l-serine dehydratase
LNQ24_005825	COG0814	amino acid
LNQ24_005830	COG1349	DNA-binding transcription factor activity
LNQ24_005840	COG0671	phosphoesterase, PA-phosphatase related
LNQ24_005895	COG0569	domain protein
LNQ24_005895	COG2985	domain, Protein
LNQ24_005915	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LNQ24_005920	COG3842	ATPase activity
LNQ24_005925	COG1176	ABC-type spermidine putrescine transport system, permease component I
LNQ24_005930	COG1177	transmembrane transport
LNQ24_005945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_005950	COG4160	amino acid transport
LNQ24_005955	COG4215	(ABC) transporter
LNQ24_005960	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_005965	COG1126	abc transporter atp-binding protein
LNQ24_005975	COG0393	Putative heavy-metal-binding
LNQ24_005980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LNQ24_005985	COG0702	epimerase
LNQ24_005990	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LNQ24_005995	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LNQ24_006000	COG1151	hydroxylamine reductase activity
LNQ24_006005	COG2431	L-lysine efflux transmembrane transporter activity
LNQ24_006010	COG3593	DNA synthesis involved in DNA repair
LNQ24_006015	COG2990	Protein conserved in bacteria
LNQ24_006020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNQ24_006030	COG1278	Cold shock
LNQ24_006035	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LNQ24_006040	COG0542	response to heat
LNQ24_006045	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LNQ24_006055	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LNQ24_006065	COG0492	ferredoxin-NADP+ reductase activity
LNQ24_006070	COG1522	sequence-specific DNA binding
LNQ24_006075	COG3107	peptidoglycan biosynthetic process
LNQ24_006075	COG1674	ftsk spoiiie
LNQ24_006080	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LNQ24_006085	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LNQ24_006090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LNQ24_006095	COG2814	Major facilitator Superfamily
LNQ24_006100	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LNQ24_006105	COG1882	Formate acetyltransferase
LNQ24_006110	COG2116	formate transmembrane transporter activity
LNQ24_006115	COG1944	ATP diphosphatase activity
LNQ24_006120	COG0252	asparaginase activity
LNQ24_006130	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LNQ24_006140	COG0539	negative regulation of cytoplasmic translation
LNQ24_006150	COG0658	competence protein
LNQ24_006150	COG2333	competence protein COMEC
LNQ24_006160	COG1663	tetraacyldisaccharide 4'-kinase activity
LNQ24_006165	COG5383	Protein conserved in bacteria
LNQ24_006175	COG1278	Cold shock
LNQ24_006180	COG2835	tetraacyldisaccharide 4'-kinase activity
LNQ24_006185	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LNQ24_006190	COG3173	Aminoglycoside phosphotransferase
LNQ24_006195	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LNQ24_006200	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LNQ24_006205	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
LNQ24_006215	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LNQ24_006220	COG2989	Protein conserved in bacteria
LNQ24_006225	COG3108	Peptidase M15
LNQ24_006230	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LNQ24_006235	COG1448	Aminotransferase
LNQ24_006250	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LNQ24_006255	COG0308	aminopeptidase N
LNQ24_006260	COG0167	dihydroorotate dehydrogenase activity
LNQ24_006270	COG0633	Ferredoxin
LNQ24_006270	COG3217	Mosc domain protein beta barrel domain protein
LNQ24_006275	COG0116	Belongs to the methyltransferase superfamily
LNQ24_006275	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LNQ24_006280	COG0488	(ABC) transporter
LNQ24_006285	COG2995	paraquat-inducible protein a
LNQ24_006290	COG3008	intermembrane lipid transfer
LNQ24_006290	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LNQ24_006295	COG3009	Protein conserved in bacteria
LNQ24_006300	COG3130	regulation of translation
LNQ24_006305	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LNQ24_006310	COG1067	ATP-dependent peptidase activity
LNQ24_006315	COG3120	sequence-specific DNA binding
LNQ24_006325	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
LNQ24_006330	COG3070	regulator of competence-specific genes
LNQ24_006335	COG1289	transmembrane transporter activity
LNQ24_006340	COG3304	Inner membrane component domain
LNQ24_006345	COG0210	DNA helicase
LNQ24_006350	COG1803	Methylglyoxal synthase
LNQ24_006360	COG1832	CoA-binding protein
LNQ24_006365	COG3785	DNA binding
LNQ24_006370	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LNQ24_006375	COG1254	Belongs to the acylphosphatase family
LNQ24_006380	COG2920	part of a sulfur-relay system
LNQ24_006390	COG0288	reversible hydration of carbon dioxide
LNQ24_006410	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LNQ24_006415	COG2943	transferase activity, transferring hexosyl groups
LNQ24_006435	COG1560	Kdo2-lipid A biosynthetic process
LNQ24_006445	COG0628	permease
LNQ24_006470	COG0418	dihydroorotase activity
LNQ24_006475	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LNQ24_006485	COG1530	ribonuclease E activity
LNQ24_006490	COG0564	pseudouridine synthase activity
LNQ24_006495	COG0424	maF-like protein
LNQ24_006500	COG1399	metal-binding, possibly nucleic acid-binding protein
LNQ24_006505	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LNQ24_006515	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LNQ24_006520	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LNQ24_006530	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNQ24_006535	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LNQ24_006540	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LNQ24_006545	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LNQ24_006550	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LNQ24_006555	COG0470	DNA polymerase III
LNQ24_006560	COG0084	hydrolase, TatD family'
LNQ24_006565	COG1263	PTS System
LNQ24_006565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_006570	COG0537	adenosine 5'-monophosphoramidase activity
LNQ24_006575	COG5633	Lipoprotein
LNQ24_006580	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
LNQ24_006595	COG3150	esterase
LNQ24_006600	COG1252	NADH dehydrogenase
LNQ24_006605	COG3134	Outer membrane lipoprotein
LNQ24_006610	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LNQ24_006615	COG4591	ABC-type transport system involved in lipoprotein release permease component
LNQ24_006625	COG4591	ABC-type transport system involved in lipoprotein release permease component
LNQ24_006645	COG2850	peptidyl-arginine hydroxylation
LNQ24_006650	COG2205	protein histidine kinase activity
LNQ24_006655	COG0745	RESPONSE REGULATOR receiver
LNQ24_006665	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LNQ24_006675	COG0482	sulfurtransferase activity
LNQ24_006685	COG1187	pseudouridine synthase activity
LNQ24_006690	COG0538	isocitrate dehydrogenase activity
LNQ24_006695	COG2771	luxR family
LNQ24_006700	COG3916	Acyl-homoserine-lactone synthase
LNQ24_006705	COG2723	6-phospho-beta-galactosidase activity
LNQ24_006715	COG0339	signal peptide processing
LNQ24_006720	COG0840	transmembrane signaling receptor activity
LNQ24_006725	COG3493	citrate carrier protein
LNQ24_006730	COG4565	transcriptional regulatory protein
LNQ24_006735	COG3290	protein histidine kinase activity
LNQ24_006740	COG0471	metal ion transport
LNQ24_006780	COG4977	sequence-specific DNA binding
LNQ24_006785	COG1702	phosphate starvation-inducible protein PhoH
LNQ24_006790	COG0387	Pfam Sodium calcium exchanger
LNQ24_006795	COG2375	cellular response to nickel ion
LNQ24_006800	COG3850	Histidine kinase
LNQ24_006810	COG1294	oxidase, subunit
LNQ24_006815	COG1271	oxidase subunit
LNQ24_006820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LNQ24_006825	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LNQ24_006830	COG3138	arginine N-succinyltransferase
LNQ24_006840	COG3724	N-succinylarginine dihydrolase activity
LNQ24_006860	COG1228	amidohydrolase
LNQ24_006870	COG0402	S-adenosylhomocysteine deaminase activity
LNQ24_006890	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LNQ24_006895	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LNQ24_006900	COG3383	formate dehydrogenase (NAD+) activity
LNQ24_006905	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LNQ24_006910	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LNQ24_006920	COG3260	NADH ubiquinone oxidoreductase 20
LNQ24_006925	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_006930	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LNQ24_006930	COG3261	NADH dehydrogenase
LNQ24_006935	COG0650	Formate hydrogenlyase subunit 4
LNQ24_006940	COG0651	ATP synthesis coupled electron transport
LNQ24_006945	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LNQ24_006955	COG0375	protein maturation
LNQ24_006960	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LNQ24_006965	COG0298	carbon dioxide binding
LNQ24_006970	COG0409	Hydrogenase expression formation protein
LNQ24_006975	COG0309	Hydrogenase expression formation protein (HypE)
LNQ24_007010	COG2207	Transcriptional regulator
LNQ24_007010	COG3708	Transcriptional regulator
LNQ24_007015	COG0012	GTP binding
LNQ24_007025	COG0193	aminoacyl-tRNA hydrolase activity
LNQ24_007035	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNQ24_007045	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LNQ24_007050	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LNQ24_007055	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LNQ24_007060	COG2890	protein-(glutamine-N5) methyltransferase activity
LNQ24_007075	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LNQ24_007080	COG0659	secondary active sulfate transmembrane transporter activity
LNQ24_007085	COG3706	GGDEF domain
LNQ24_007110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LNQ24_007120	COG3381	protein complex oligomerization
LNQ24_007140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LNQ24_007150	COG0673	inositol 2-dehydrogenase activity
LNQ24_007155	COG0728	peptidoglycan biosynthetic process
LNQ24_007180	COG3102	Protein conserved in bacteria
LNQ24_007185	COG3142	Participates in the control of copper homeostasis
LNQ24_007200	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LNQ24_007205	COG1801	Protein of unknown function DUF72
LNQ24_007215	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LNQ24_007220	COG0494	nUDIX hydrolase
LNQ24_007230	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LNQ24_007240	COG2255	four-way junction helicase activity
LNQ24_007245	COG3104	oligopeptide transport
LNQ24_007250	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LNQ24_007255	COG1121	(ABC) transporter
LNQ24_007260	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LNQ24_007265	COG0739	heme binding
LNQ24_007270	COG1560	Kdo2-lipid A biosynthetic process
LNQ24_007275	COG0469	pyruvate kinase activity
LNQ24_007280	COG1737	Transcriptional regulator
LNQ24_007285	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LNQ24_007290	COG0800	Aldolase
LNQ24_007300	COG2076	Multidrug Resistance protein
LNQ24_007305	COG0251	oxidation-reduction process
LNQ24_007310	COG1199	ATP-dependent helicase activity
LNQ24_007315	COG1214	PFAM Peptidase M22, glycoprotease
LNQ24_007320	COG3065	identical protein binding
LNQ24_007325	COG0318	PFAM AMP-dependent synthetase and ligase
LNQ24_007330	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LNQ24_007335	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LNQ24_007340	COG2894	cell division
LNQ24_007345	COG0850	regulation of cytokinetic process
LNQ24_007350	COG3100	YcgL domain-containing protein
LNQ24_007355	COG0179	Fumarylacetoacetate (FAA) hydrolase
LNQ24_007360	COG2983	Belongs to the UPF0260 family
LNQ24_007380	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LNQ24_007390	COG2719	SpoVR family
LNQ24_007395	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LNQ24_007400	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LNQ24_007405	COG2814	Major facilitator Superfamily
LNQ24_007415	COG2200	EAL domain
LNQ24_007415	COG2199	diguanylate cyclase activity
LNQ24_007415	COG2202	Pas domain
LNQ24_007435	COG2718	Belongs to the UPF0229 family
LNQ24_007440	COG2766	serine protein kinase
LNQ24_007445	COG3713	MltA-interacting MipA family protein
LNQ24_007450	COG2194	sulfuric ester hydrolase activity
LNQ24_007465	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LNQ24_007470	COG3139	Protein of unknown function (DUF1315)
LNQ24_007475	COG1335	isochorismatase
LNQ24_007480	COG0252	asparaginase activity
LNQ24_007485	COG0616	signal peptide processing
LNQ24_007490	COG0778	Nitroreductase
LNQ24_007500	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNQ24_007510	COG0494	nUDIX hydrolase
LNQ24_007515	COG0708	Exodeoxyribonuclease III
LNQ24_007545	COG0788	formyltetrahydrofolate deformylase activity
LNQ24_007555	COG1752	Esterase of the alpha-beta hydrolase superfamily
LNQ24_007560	COG0745	RESPONSE REGULATOR receiver
LNQ24_007580	COG1454	alcohol dehydrogenase
LNQ24_007580	COG1012	belongs to the aldehyde dehydrogenase family
LNQ24_007585	COG2095	MarC family integral membrane protein
LNQ24_007590	COG4166	transmembrane transport
LNQ24_007605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNQ24_007620	COG3099	Belongs to the UPF0263 family
LNQ24_007625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNQ24_007645	COG2350	Protein conserved in bacteria
LNQ24_007660	COG3710	Transcriptional regulator
LNQ24_007695	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LNQ24_007720	COG0727	PFAM Uncharacterised protein family (UPF0153)
LNQ24_007725	COG3047	cAMP biosynthetic process
LNQ24_007740	COG0133	tryptophan synthase activity
LNQ24_007745	COG0134	indole-3-glycerol-phosphate synthase activity
LNQ24_007745	COG0135	phosphoribosylanthranilate isomerase activity
LNQ24_007755	COG0512	Glutamine amidotransferase of anthranilate synthase
LNQ24_007765	COG0613	PHP domain protein
LNQ24_007770	COG0009	L-threonylcarbamoyladenylate synthase
LNQ24_007775	COG1187	pseudouridine synthase activity
LNQ24_007785	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_007790	COG0616	signal peptide processing
LNQ24_007805	COG0583	DNA-binding transcription factor activity
LNQ24_007825	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LNQ24_007835	COG0671	phosphoesterase, PA-phosphatase related
LNQ24_007840	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LNQ24_007845	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LNQ24_007865	COG0023	Translation Initiation Factor
LNQ24_007875	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LNQ24_007880	COG3447	MASE1 domain protein
LNQ24_007880	COG5002	protein histidine kinase activity
LNQ24_007880	COG5001	Diguanylate cyclase
LNQ24_007885	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LNQ24_007890	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LNQ24_007900	COG4659	FMN binding
LNQ24_007910	COG2207	Transcriptional regulator
LNQ24_007910	COG3708	Transcriptional regulator
LNQ24_007925	COG4657	Part of a membrane complex involved in electron transport
LNQ24_007935	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LNQ24_007945	COG0673	inositol 2-dehydrogenase activity
LNQ24_007950	COG0385	Bile acid
LNQ24_007955	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LNQ24_007960	COG5339	Protein conserved in bacteria
LNQ24_007965	COG1482	cell wall glycoprotein biosynthetic process
LNQ24_007970	COG0114	fumarate hydratase activity
LNQ24_007980	COG1940	carbohydrate kinase activity
LNQ24_007985	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LNQ24_008005	COG1742	UPF0060 membrane protein
LNQ24_008010	COG4221	oxidoreductase activity
LNQ24_008015	COG3023	N-Acetylmuramoyl-L-alanine amidase
LNQ24_008060	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LNQ24_008100	COG1011	Hydrolase
LNQ24_008110	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LNQ24_008115	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LNQ24_008120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LNQ24_008125	COG0589	response to stress
LNQ24_008155	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LNQ24_008160	COG3623	hexulose-6-phosphate isomerase
LNQ24_008165	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LNQ24_008170	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LNQ24_008180	COG0531	amino acid
LNQ24_008190	COG0745	RESPONSE REGULATOR receiver
LNQ24_008195	COG2205	protein histidine kinase activity
LNQ24_008210	COG2207	Transcriptional regulator
LNQ24_008215	COG1881	PFAM PEBP family protein
LNQ24_008225	COG3591	Belongs to the peptidase S1B family
LNQ24_008230	COG1643	Atp-dependent helicase
LNQ24_008235	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LNQ24_008240	COG3784	Protein of unknown function (DUF1318)
LNQ24_008255	COG2911	Protein conserved in bacteria
LNQ24_008260	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNQ24_008265	COG3187	Heat shock protein
LNQ24_008270	COG3042	response to heat
LNQ24_008275	COG1285	pathogenesis
LNQ24_008285	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LNQ24_008285	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_008285	COG1013	pyruvate-flavodoxin oxidoreductase activity
LNQ24_008285	COG0674	pyruvate-flavodoxin oxidoreductase activity
LNQ24_008300	COG4166	transmembrane transport
LNQ24_008305	COG2866	Carboxypeptidase
LNQ24_008310	COG4948	Mandelate Racemase Muconate Lactonizing
LNQ24_008315	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LNQ24_008325	COG5642	Protein of unknown function (DUF2384)
LNQ24_008335	COG3768	UPF0283 membrane protein
LNQ24_008340	COG3106	COG3106 Predicted ATPase
LNQ24_008350	COG1983	PspC domain protein
LNQ24_008360	COG1842	Phage shock protein A
LNQ24_008365	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LNQ24_008380	COG4166	transmembrane transport
LNQ24_008390	COG4171	peptide transport system, permease
LNQ24_008395	COG4172	Belongs to the ABC transporter superfamily
LNQ24_008400	COG4172	Belongs to the ABC transporter superfamily
LNQ24_008410	COG3104	oligopeptide transport
LNQ24_008420	COG0484	heat shock protein binding
LNQ24_008465	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LNQ24_008470	COG3133	Outer membrane lipoprotein
LNQ24_008475	COG1846	Transcriptional regulator
LNQ24_008485	COG4989	oxidoreductase activity
LNQ24_008490	COG3313	Fe-S protein
LNQ24_008495	COG2194	sulfuric ester hydrolase activity
LNQ24_008500	COG1309	transcriptional regulator
LNQ24_008505	COG1902	pentaerythritol trinitrate reductase activity
LNQ24_008520	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LNQ24_008525	COG0791	NLP P60 protein
LNQ24_008530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LNQ24_008540	COG1609	Transcriptional regulator
LNQ24_008545	COG0583	DNA-binding transcription factor activity
LNQ24_008550	COG2814	Major facilitator Superfamily
LNQ24_008555	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LNQ24_008560	COG0307	riboflavin synthase, alpha
LNQ24_008595	COG1376	ErfK ybiS ycfS ynhG family protein
LNQ24_008595	COG1388	LysM domain
LNQ24_008600	COG2166	iron-sulfur cluster assembly
LNQ24_008610	COG0719	Fe-S assembly protein
LNQ24_008615	COG0396	ATPase activity
LNQ24_008620	COG0719	Fe-S assembly protein
LNQ24_008625	COG0316	Belongs to the HesB IscA family
LNQ24_008630	COG2050	protein possibly involved in aromatic compounds catabolism
LNQ24_008635	COG0277	FAD linked oxidase domain protein
LNQ24_008635	COG0247	lactate metabolic process
LNQ24_008640	COG0628	permease
LNQ24_008650	COG0574	Belongs to the PEP-utilizing enzyme family
LNQ24_008650	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LNQ24_008655	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LNQ24_008660	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LNQ24_008670	COG4771	TonB-dependent receptor
LNQ24_008675	COG3720	iron ion transport
LNQ24_008680	COG4558	Periplasmic binding protein
LNQ24_008685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNQ24_008690	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LNQ24_008700	COG0095	Lipoate-protein ligase
LNQ24_008705	COG0791	NLP P60 protein
LNQ24_008710	COG2076	Multidrug Resistance protein
LNQ24_008715	COG2076	Multidrug Resistance protein
LNQ24_008720	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LNQ24_008735	COG0463	Glycosyl transferase, family 2
LNQ24_008740	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LNQ24_008750	COG4139	cobalamin transport
LNQ24_008755	COG4974	Belongs to the 'phage' integrase family
LNQ24_008770	COG2184	nucleotidyltransferase activity
LNQ24_008795	COG0776	regulation of translation
LNQ24_008865	COG0803	Belongs to the bacterial solute-binding protein 9 family
LNQ24_008870	COG1121	(ABC) transporter
LNQ24_008875	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LNQ24_008880	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LNQ24_008885	COG3001	Fructosamine kinase
LNQ24_008895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LNQ24_008900	COG1988	membrane-bound metal-dependent
LNQ24_008905	COG1823	symporter activity
LNQ24_008910	COG3023	N-Acetylmuramoyl-L-alanine amidase
LNQ24_008920	COG2814	Major facilitator Superfamily
LNQ24_008930	COG0501	Belongs to the peptidase M48B family
LNQ24_008935	COG0793	Belongs to the peptidase S41A family
LNQ24_008945	COG1956	GAF domain-containing protein
LNQ24_008950	COG2995	paraquat-inducible protein a
LNQ24_008955	COG3008	intermembrane lipid transfer
LNQ24_008960	COG2203	Gaf domain
LNQ24_008960	COG5001	Diguanylate cyclase
LNQ24_008960	COG4251	negative regulation of phosphorylation
LNQ24_008960	COG3706	GGDEF domain
LNQ24_009040	COG1276	copper resistance
LNQ24_009045	COG2372	response to copper ion
LNQ24_009050	COG1528	Iron-storage protein
LNQ24_009065	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LNQ24_009070	COG1770	oligopeptidase
LNQ24_009080	COG3097	Belongs to the UPF0267 family
LNQ24_009085	COG3141	response to X-ray
LNQ24_009090	COG0513	Belongs to the DEAD box helicase family
LNQ24_009110	COG0494	nUDIX hydrolase
LNQ24_009115	COG1760	l-serine dehydratase
LNQ24_009120	COG1253	flavin adenine dinucleotide binding
LNQ24_009125	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LNQ24_009125	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_009130	COG3715	PTS system
LNQ24_009135	COG3716	PTS system mannose fructose sorbose family IID component
LNQ24_009140	COG4811	Protein of unknown function (DUF986)
LNQ24_009145	COG1971	Probably functions as a manganese efflux pump
LNQ24_009165	COG1960	acyl-CoA dehydrogenase activity
LNQ24_009175	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LNQ24_009205	COG2226	methyltransferase
LNQ24_009210	COG0768	penicillin binding
LNQ24_009215	COG1496	oxidoreductase activity
LNQ24_009235	COG1113	amino acid transport
LNQ24_009270	COG2207	Transcriptional regulator
LNQ24_009290	COG1132	(ABC) transporter
LNQ24_009320	COG1181	Belongs to the D-alanine--D-alanine ligase family
LNQ24_009340	COG1278	Cold shock
LNQ24_009345	COG1278	Cold shock
LNQ24_009350	COG1278	Cold shock
LNQ24_009365	COG2169	Transcriptional regulator
LNQ24_009365	COG1917	Cupin 2, conserved barrel domain protein
LNQ24_009370	COG1447	Phosphotransferase system cellobiose-specific component IIA
LNQ24_009375	COG2723	6-phospho-beta-galactosidase activity
LNQ24_009380	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LNQ24_009385	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LNQ24_009390	COG1187	pseudouridine synthase activity
LNQ24_009400	COG3122	Protein conserved in bacteria
LNQ24_009405	COG1757	Na H antiporter
LNQ24_009420	COG2235	arginine
LNQ24_009435	COG0076	glutamate decarboxylase activity
LNQ24_009440	COG0531	amino acid
LNQ24_009475	COG2153	protein acetylation
LNQ24_009480	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LNQ24_009510	COG0840	transmembrane signaling receptor activity
LNQ24_009515	COG2801	Transposase and inactivated derivatives
LNQ24_009520	COG1192	Involved in chromosome partitioning
LNQ24_009525	COG4974	Belongs to the 'phage' integrase family
LNQ24_009580	COG4695	Portal protein
LNQ24_009675	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LNQ24_009735	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LNQ24_009740	COG0322	excinuclease ABC activity
LNQ24_009745	COG2197	response regulator
LNQ24_009770	COG1113	amino acid transport
LNQ24_009780	COG0531	amino acid
LNQ24_009785	COG3710	Transcriptional regulator
LNQ24_009790	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNQ24_009795	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LNQ24_009795	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LNQ24_009795	COG0506	proline dehydrogenase activity
LNQ24_009800	COG1126	abc transporter atp-binding protein
LNQ24_009805	COG0765	amino acid transport
LNQ24_009810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_009815	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LNQ24_009825	COG1191	sigma factor activity
LNQ24_009865	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LNQ24_009870	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LNQ24_009885	COG1677	Flagellar hook-basal body complex protein FliE
LNQ24_009895	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LNQ24_009900	COG1317	bacterial-type flagellum organization
LNQ24_009905	COG1157	protein secretion by the type III secretion system
LNQ24_009920	COG1580	Controls the rotational direction of flagella during chemotaxis
LNQ24_010000	COG1558	bacterial-type flagellum-dependent cell motility
LNQ24_010005	COG1815	bacterial-type flagellum-dependent cell motility
LNQ24_010015	COG2747	anti-sigma28 factor FlgM
LNQ24_010020	COG3418	PFAM FlgN family protein
LNQ24_010035	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNQ24_010040	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNQ24_010045	COG4935	Belongs to the peptidase S8 family
LNQ24_010045	COG1404	Belongs to the peptidase S8 family
LNQ24_010065	COG3188	usher protein
LNQ24_010070	COG3121	Chaperone
LNQ24_010080	COG3539	Fimbrial protein
LNQ24_010110	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LNQ24_010115	COG0745	RESPONSE REGULATOR receiver
LNQ24_010125	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LNQ24_010130	COG0840	transmembrane signaling receptor activity
LNQ24_010135	COG0840	transmembrane signaling receptor activity
LNQ24_010140	COG0835	chemotaxis
LNQ24_010145	COG2198	Histidine kinase
LNQ24_010145	COG0643	Histidine kinase
LNQ24_010150	COG1360	Flagellar Motor Protein
LNQ24_010170	COG0589	response to stress
LNQ24_010175	COG1285	pathogenesis
LNQ24_010180	COG0840	transmembrane signaling receptor activity
LNQ24_010195	COG1609	Transcriptional regulator
LNQ24_010205	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_010205	COG3321	synthase
LNQ24_010205	COG0604	alcohol dehydrogenase
LNQ24_010255	COG0471	metal ion transport
LNQ24_010270	COG3051	citrate lyase alpha subunit
LNQ24_010275	COG2301	Belongs to the HpcH HpaI aldolase family
LNQ24_010280	COG3052	prosthetic group binding
LNQ24_010285	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LNQ24_010290	COG3290	protein histidine kinase activity
LNQ24_010295	COG4565	transcriptional regulatory protein
LNQ24_010310	COG2271	Major facilitator Superfamily
LNQ24_010315	COG1840	ABC-type Fe3 transport system, periplasmic component
LNQ24_010325	COG3842	ATPase activity
LNQ24_010345	COG1289	transmembrane transporter activity
LNQ24_010355	COG2925	Exonuclease
LNQ24_010360	COG0531	amino acid
LNQ24_010365	COG4771	TonB-dependent receptor
LNQ24_010375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNQ24_010385	COG0833	amino acid
LNQ24_010390	COG0583	DNA-binding transcription factor activity
LNQ24_010400	COG2855	membrane
LNQ24_010405	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LNQ24_010410	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LNQ24_010410	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LNQ24_010410	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LNQ24_010415	COG1105	Belongs to the carbohydrate kinase PfkB family
LNQ24_010430	COG3005	denitrification pathway
LNQ24_010435	COG0243	molybdopterin cofactor binding
LNQ24_010450	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LNQ24_010460	COG0246	Mannitol dehydrogenase
LNQ24_010470	COG0523	cobalamin synthesis protein
LNQ24_010475	COG0671	phosphoesterase, PA-phosphatase related
LNQ24_010480	COG0791	NLP P60 protein
LNQ24_010485	COG2200	EAL domain
LNQ24_010490	COG4166	transmembrane transport
LNQ24_010495	COG4174	ABC transporter (Permease)
LNQ24_010500	COG4239	(ABC) transporter, permease
LNQ24_010505	COG4172	Belongs to the ABC transporter superfamily
LNQ24_010515	COG2814	Major facilitator Superfamily
LNQ24_010520	COG1187	pseudouridine synthase activity
LNQ24_010525	COG1061	Type III restriction enzyme res subunit
LNQ24_010540	COG3082	Protein of unknown function (DUF1414)
LNQ24_010545	COG3083	sulfuric ester hydrolase activity
LNQ24_010575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LNQ24_010580	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LNQ24_010600	COG2223	nitrite transmembrane transporter activity
LNQ24_010605	COG2198	Histidine kinase
LNQ24_010605	COG0642	Histidine kinase
LNQ24_010615	COG2205	protein histidine kinase activity
LNQ24_010615	COG0784	Response regulator, receiver
LNQ24_010625	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LNQ24_010630	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNQ24_010640	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LNQ24_010650	COG4574	serine-type endopeptidase inhibitor activity
LNQ24_010660	COG2246	polysaccharide biosynthetic process
LNQ24_010675	COG0814	amino acid
LNQ24_010700	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LNQ24_010705	COG0596	Alpha beta hydrolase
LNQ24_010710	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LNQ24_010715	COG1169	isochorismate synthase
LNQ24_010720	COG4575	ribosome binding
LNQ24_010735	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_010740	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LNQ24_010750	COG0839	Belongs to the complex I subunit 6 family
LNQ24_010755	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_010760	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LNQ24_010765	COG1034	ATP synthesis coupled electron transport
LNQ24_010785	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_010790	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LNQ24_010795	COG0583	DNA-binding transcription factor activity
LNQ24_010800	COG0436	Aminotransferase
LNQ24_010805	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LNQ24_010810	COG0471	metal ion transport
LNQ24_010810	COG0490	domain, Protein
LNQ24_010820	COG3013	Belongs to the UPF0304 family
LNQ24_010825	COG3092	negative regulation of chromosome organization
LNQ24_010835	COG0280	phosphate acetyltransferase
LNQ24_010835	COG0857	belongs to the CobB CobQ family
LNQ24_010840	COG1609	Transcriptional regulator
LNQ24_010855	COG3037	sugar-specific permease SgaT UlaA
LNQ24_010860	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LNQ24_010865	COG0622	Phosphoesterase
LNQ24_010875	COG0625	glutathione transferase activity
LNQ24_010880	COG1090	epimerase
LNQ24_010890	COG4160	amino acid transport
LNQ24_010895	COG4215	(ABC) transporter
LNQ24_010910	COG0163	prenyltransferase activity
LNQ24_010915	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LNQ24_010920	COG1286	toxin biosynthetic process
LNQ24_010925	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LNQ24_010930	COG0285	dihydrofolate synthase activity
LNQ24_010940	COG0586	Pfam SNARE associated Golgi protein
LNQ24_010950	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LNQ24_010975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LNQ24_010980	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LNQ24_011010	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LNQ24_011025	COG3101	peptidyl-lysine hydroxylation
LNQ24_011030	COG0730	response to heat
LNQ24_011035	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LNQ24_011045	COG2890	protein-(glutamine-N5) methyltransferase activity
LNQ24_011050	COG2840	Smr protein MutS2
LNQ24_011055	COG2062	phosphohistidine phosphatase, SixA
LNQ24_011060	COG1024	Enoyl-CoA hydratase
LNQ24_011060	COG1250	3-hydroxyacyl-CoA dehydrogenase
LNQ24_011065	COG0183	Belongs to the thiolase family
LNQ24_011070	COG3691	Protein conserved in bacteria
LNQ24_011085	COG4235	cytochrome complex assembly
LNQ24_011085	COG3088	subunit of a heme lyase
LNQ24_011090	COG4235	cytochrome complex assembly
LNQ24_011090	COG3088	subunit of a heme lyase
LNQ24_011095	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LNQ24_011100	COG1138	Cytochrome C-type biogenesis protein
LNQ24_011105	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LNQ24_011110	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LNQ24_011115	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LNQ24_011120	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LNQ24_011140	COG2824	Alkylphosphonate utilization operon protein PhnA
LNQ24_011145	COG2951	lytic endotransglycosylase activity
LNQ24_011150	COG1598	PFAM Uncharacterised protein family UPF0150
LNQ24_011160	COG3038	cytochrome b561
LNQ24_011165	COG0436	Aminotransferase
LNQ24_011175	COG3275	phosphorelay sensor kinase activity
LNQ24_011180	COG3279	Response regulator of the LytR AlgR family
LNQ24_011185	COG2223	nitrite transmembrane transporter activity
LNQ24_011190	COG0837	glucose binding
LNQ24_011210	COG1914	H( )-stimulated, divalent metal cation uptake system
LNQ24_011215	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNQ24_011280	COG3530	Putative quorum-sensing-regulated virulence factor
LNQ24_011285	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LNQ24_011295	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LNQ24_011305	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LNQ24_011320	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LNQ24_011330	COG4208	sulfate ABC transporter
LNQ24_011335	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LNQ24_011340	COG4150	thiosulfate binding
LNQ24_011350	COG1737	Transcriptional regulator
LNQ24_011355	COG2731	YhcH YjgK YiaL family protein
LNQ24_011370	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNQ24_011375	COG2837	iron assimilation
LNQ24_011385	COG3111	PFAM Bacterial OB fold (BOF) protein
LNQ24_011435	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LNQ24_011455	COG1671	Belongs to the UPF0178 family
LNQ24_011460	COG0281	malic enzyme
LNQ24_011460	COG0280	phosphate acetyltransferase
LNQ24_011465	COG0494	nUDIX hydrolase
LNQ24_011470	COG3005	denitrification pathway
LNQ24_011475	COG3043	anaerobic respiration
LNQ24_011480	COG0243	molybdopterin cofactor binding
LNQ24_011485	COG3062	negative regulation of establishment of protein localization
LNQ24_011490	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LNQ24_011490	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LNQ24_011495	COG2197	response regulator
LNQ24_011505	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNQ24_011515	COG1605	Chorismate mutase
LNQ24_011520	COG1393	Belongs to the ArsC family
LNQ24_011525	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LNQ24_011530	COG1876	peptidase activity
LNQ24_011540	COG0400	carboxylic ester hydrolase activity
LNQ24_011560	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LNQ24_011565	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNQ24_011570	COG2716	regulation of RNA biosynthetic process
LNQ24_011575	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LNQ24_011580	COG0628	permease
LNQ24_011585	COG4783	chaperone-mediated protein folding
LNQ24_011590	COG1393	Belongs to the ArsC family
LNQ24_011595	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LNQ24_011600	COG2233	PERMEase
LNQ24_011605	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LNQ24_011610	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LNQ24_011615	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LNQ24_011620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LNQ24_011630	COG0581	inorganic phosphate transmembrane transporter activity
LNQ24_011635	COG0573	inorganic phosphate transmembrane transporter activity
LNQ24_011640	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LNQ24_011655	COG2239	Acts as a magnesium transporter
LNQ24_011660	COG0443	Heat shock 70 kDa protein
LNQ24_011670	COG3121	Chaperone
LNQ24_011695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNQ24_011705	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNQ24_011710	COG0477	Major facilitator Superfamily
LNQ24_011715	COG2205	protein histidine kinase activity
LNQ24_011720	COG0745	RESPONSE REGULATOR receiver
LNQ24_011725	COG3422	double-strand break repair
LNQ24_011730	COG0826	peptidase U32
LNQ24_011735	COG1597	lipid kinase activity
LNQ24_011750	COG0351	phosphomethylpyrimidine kinase
LNQ24_011760	COG0519	Catalyzes the synthesis of GMP from XMP
LNQ24_011760	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LNQ24_011765	COG0517	IMP dehydrogenase activity
LNQ24_011765	COG0516	GMP reductase activity
LNQ24_011770	COG1570	exodeoxyribonuclease VII activity
LNQ24_011775	COG1645	bacterial-type flagellum-dependent swarming motility
LNQ24_011785	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LNQ24_011790	COG2976	Protein conserved in bacteria
LNQ24_011795	COG0124	histidyl-tRNA synthetase
LNQ24_011815	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LNQ24_011830	COG4953	penicillin-binding protein 1C
LNQ24_011835	COG2373	Large extracellular alpha-helical protein
LNQ24_011850	COG2975	iron-sulfur cluster assembly
LNQ24_011855	COG0633	Ferredoxin
LNQ24_011860	COG0443	Heat shock 70 kDa protein
LNQ24_011875	COG0822	iron-sulfur transferase activity
LNQ24_011885	COG1959	2 iron, 2 sulfur cluster binding
LNQ24_011890	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LNQ24_011900	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LNQ24_011905	COG3683	transport system, periplasmic component
LNQ24_011910	COG3711	transcriptional antiterminator
LNQ24_011915	COG2814	Major facilitator Superfamily
LNQ24_011925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LNQ24_011925	COG1017	nitric oxide dioxygenase activity
LNQ24_011930	COG2188	Transcriptional regulator
LNQ24_011940	COG3457	Alanine racemase
LNQ24_011945	COG1735	metal-dependent hydrolase with the TIM-barrel fold
LNQ24_011960	COG0347	Belongs to the P(II) protein family
LNQ24_011965	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LNQ24_011965	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LNQ24_011970	COG2204	response regulator
LNQ24_011980	COG2205	protein histidine kinase activity
LNQ24_011995	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LNQ24_012005	COG0560	Phosphoserine phosphatase
LNQ24_012010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_012010	COG1263	PTS System
LNQ24_012020	COG1737	Transcriptional regulator
LNQ24_012025	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LNQ24_012035	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LNQ24_012045	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LNQ24_012060	COG0481	GTPase activity
LNQ24_012065	COG3086	response to oxidative stress
LNQ24_012075	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LNQ24_012085	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LNQ24_012095	COG0513	Belongs to the DEAD box helicase family
LNQ24_012110	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LNQ24_012120	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LNQ24_012125	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LNQ24_012130	COG0497	DNA recombination
LNQ24_012135	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LNQ24_012145	COG2867	negative regulation of translational initiation
LNQ24_012150	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LNQ24_012195	COG3121	Chaperone
LNQ24_012200	COG3188	usher protein
LNQ24_012225	COG0583	DNA-binding transcription factor activity
LNQ24_012300	COG1069	ribulokinase activity
LNQ24_012310	COG1172	Belongs to the binding-protein-dependent transport system permease family
LNQ24_012315	COG1129	ABC transporter
LNQ24_012335	COG1620	l-lactate permease
LNQ24_012340	COG1304	FMN binding
LNQ24_012345	COG0579	oxidoreductase
LNQ24_012350	COG1278	Cold shock
LNQ24_012380	COG1780	Probably involved in ribonucleotide reductase function
LNQ24_012385	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNQ24_012395	COG4175	Glycine betaine
LNQ24_012400	COG4176	ABC-type proline glycine betaine transport system permease component
LNQ24_012405	COG2113	Glycine betaine
LNQ24_012415	COG2814	Major facilitator Superfamily
LNQ24_012420	COG1846	Transcriptional regulator
LNQ24_012430	COG1566	PFAM secretion protein HlyD family protein
LNQ24_012435	COG2814	Major facilitator Superfamily
LNQ24_012440	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNQ24_012445	COG3118	belongs to the thioredoxin family
LNQ24_012450	COG3148	PFAM DTW domain containing protein
LNQ24_012455	COG0045	succinate-CoA ligase (ADP-forming) activity
LNQ24_012455	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LNQ24_012455	COG1042	CoA-binding domain protein
LNQ24_012460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNQ24_012465	COG5544	Lipoprotein
LNQ24_012495	COG0542	response to heat
LNQ24_012500	COG1496	oxidoreductase activity
LNQ24_012505	COG0564	pseudouridine synthase activity
LNQ24_012510	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LNQ24_012515	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LNQ24_012525	COG1605	Chorismate mutase
LNQ24_012525	COG0077	Prephenate dehydratase
LNQ24_012530	COG0287	Prephenate dehydrogenase
LNQ24_012530	COG1605	Chorismate mutase
LNQ24_012535	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LNQ24_012540	COG3279	Response regulator of the LytR AlgR family
LNQ24_012545	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LNQ24_012550	COG3137	Salt-induced outer membrane protein
LNQ24_012555	COG0335	large ribosomal subunit rRNA binding
LNQ24_012560	COG0336	Belongs to the RNA methyltransferase TrmD family
LNQ24_012565	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LNQ24_012575	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LNQ24_012580	COG4137	Cytochrome C assembly protein
LNQ24_012585	COG4536	flavin adenine dinucleotide binding
LNQ24_012590	COG1854	S-ribosylhomocysteine lyase activity
LNQ24_012595	COG2918	glutathione biosynthetic process
LNQ24_012600	COG1238	metal cluster binding
LNQ24_012605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LNQ24_012635	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LNQ24_012640	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LNQ24_012645	COG2137	regulation of response to DNA damage stimulus
LNQ24_012650	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LNQ24_012665	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LNQ24_012665	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LNQ24_012690	COG3031	protein transport across the cell outer membrane
LNQ24_012700	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LNQ24_012745	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LNQ24_012755	COG3397	chitin binding
LNQ24_012775	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNQ24_012875	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LNQ24_012880	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNQ24_012885	COG4942	peptidase
LNQ24_012885	COG1388	LysM domain
LNQ24_012895	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LNQ24_012900	COG0585	pseudouridine synthase activity
LNQ24_012905	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
LNQ24_012915	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LNQ24_012925	COG0529	Catalyzes the synthesis of activated sulfate
LNQ24_012930	COG2895	sulfate adenylyltransferase (ATP) activity
LNQ24_012935	COG0175	sulfate reduction
LNQ24_012940	COG1648	precorrin-2 dehydrogenase activity
LNQ24_012940	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LNQ24_012945	COG2234	aminopeptidase activity
LNQ24_012960	COG0175	sulfate reduction
LNQ24_012970	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LNQ24_012975	COG0720	synthase
LNQ24_012980	COG0602	queuosine metabolic process
LNQ24_012990	COG0504	CTP synthase activity
LNQ24_012995	COG3956	TIGRFAM MazG family protein
LNQ24_013000	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LNQ24_013005	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNQ24_013015	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNQ24_013020	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LNQ24_013025	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LNQ24_013035	COG2860	membrane
LNQ24_013040	COG0316	Belongs to the HesB IscA family
LNQ24_013050	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LNQ24_013055	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LNQ24_013060	COG1643	Atp-dependent helicase
LNQ24_013065	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LNQ24_013070	COG1489	DNA binding
LNQ24_013085	COG0617	tRNA 3'-terminal CCA addition
LNQ24_013090	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LNQ24_013095	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LNQ24_013100	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LNQ24_013105	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LNQ24_013110	COG0726	polysaccharide deacetylase
LNQ24_013115	COG0842	Transport permease protein
LNQ24_013120	COG1131	(ABC) transporter
LNQ24_013125	COG0288	reversible hydration of carbon dioxide
LNQ24_013135	COG2132	Multicopper oxidase
LNQ24_013145	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LNQ24_013160	COG3112	Uncharacterised protein family (UPF0231)
LNQ24_013165	COG1049	propionate catabolic process, 2-methylcitrate cycle
LNQ24_013175	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LNQ24_013180	COG0508	dehydrogenase complex catalyzes the overall conversion of
LNQ24_013185	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LNQ24_013190	COG2186	Transcriptional regulator
LNQ24_013195	COG1113	amino acid transport
LNQ24_013200	COG3725	Membrane protein required for beta-lactamase induction
LNQ24_013215	COG4969	Belongs to the N-Me-Phe pilin family
LNQ24_013220	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LNQ24_013225	COG1459	type II secretion system
LNQ24_013230	COG0516	GMP reductase activity
LNQ24_013250	COG0494	nUDIX hydrolase
LNQ24_013275	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LNQ24_013280	COG0849	cell division
LNQ24_013285	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LNQ24_013295	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LNQ24_013300	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LNQ24_013305	COG0772	Belongs to the SEDS family
LNQ24_013320	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LNQ24_013325	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LNQ24_013330	COG0768	penicillin binding
LNQ24_013335	COG3116	cell division
LNQ24_013340	COG0275	rRNA processing
LNQ24_013355	COG0675	Transposase, IS605 OrfB family
LNQ24_013375	COG0028	Belongs to the TPP enzyme family
LNQ24_013380	COG1022	Amp-dependent synthetase and ligase
LNQ24_013395	COG0473	3-isopropylmalate dehydrogenase activity
LNQ24_013400	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LNQ24_013410	COG2814	Major facilitator Superfamily
LNQ24_013425	COG4143	(ABC) transporter
LNQ24_013430	COG1178	ABC-type Fe3 transport system permease component
LNQ24_013440	COG0586	Pfam SNARE associated Golgi protein
LNQ24_013445	COG0417	DNA replication proofreading
LNQ24_013450	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LNQ24_013455	COG0564	pseudouridine synthase activity
LNQ24_013465	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LNQ24_013475	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LNQ24_013480	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LNQ24_013485	COG2967	ApaG domain
LNQ24_013510	COG2966	Psort location CytoplasmicMembrane, score
LNQ24_013520	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LNQ24_013535	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LNQ24_013540	COG1047	Peptidyl-prolyl cis-trans
LNQ24_013545	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LNQ24_013555	COG0196	riboflavin kinase activity
LNQ24_013565	COG0583	DNA-binding transcription factor activity
LNQ24_013570	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LNQ24_013580	COG0443	Heat shock 70 kDa protein
LNQ24_013585	COG1584	GPR1 FUN34 yaaH family protein
LNQ24_013595	COG0477	Major facilitator Superfamily
LNQ24_013600	COG0521	Mo-molybdopterin cofactor biosynthetic process
LNQ24_013605	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LNQ24_013640	COG0745	RESPONSE REGULATOR receiver
LNQ24_013645	COG3045	CreA protein
LNQ24_013650	COG3708	Transcriptional regulator
LNQ24_013650	COG2207	Transcriptional regulator
LNQ24_013655	COG0406	alpha-ribazole phosphatase activity
LNQ24_013660	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LNQ24_013665	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LNQ24_013670	COG0741	lytic transglycosylase activity
LNQ24_013690	COG0488	(ABC) transporter
LNQ24_013705	COG0560	Phosphoserine phosphatase
LNQ24_013710	COG3726	membrane protein affecting hemolysin expression
LNQ24_013720	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LNQ24_013735	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNQ24_013740	COG0084	hydrolase, TatD family'
LNQ24_013745	COG4667	esterase of the alpha-beta hydrolase superfamily
LNQ24_013755	COG2823	Periplasmic or secreted lipoprotein
LNQ24_013770	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
LNQ24_013810	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LNQ24_013810	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
LNQ24_013810	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LNQ24_013815	COG1461	Dihydroxyacetone kinase
LNQ24_013820	COG2376	Dihydroxyacetone kinase
LNQ24_013830	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNQ24_013835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNQ24_013850	COG0859	PFAM glycosyl transferase family 9
LNQ24_013875	COG3119	arylsulfatase activity
LNQ24_013880	COG0641	radical SAM
LNQ24_013890	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_013900	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LNQ24_013910	COG3716	PTS system mannose fructose sorbose family IID component
LNQ24_013915	COG3715	PTS system
LNQ24_013920	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LNQ24_013925	COG2222	sugar isomerase
LNQ24_013935	COG1349	DNA-binding transcription factor activity
LNQ24_013940	COG3119	arylsulfatase activity
LNQ24_013960	COG5492	domain, Protein
LNQ24_014050	COG3077	Addiction module antitoxin, RelB DinJ family
LNQ24_014115	COG0795	lipopolysaccharide-transporting ATPase activity
LNQ24_014120	COG0795	lipopolysaccharide-transporting ATPase activity
LNQ24_014125	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LNQ24_014130	COG2927	DNA polymerase III (CHI subunit)
LNQ24_014145	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LNQ24_014165	COG3624	Phosphonate C-P lyase system protein PhnG
LNQ24_014170	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LNQ24_014175	COG3626	phosphonate metabolism
LNQ24_014180	COG3627	carbon phosphorus lyase activity
LNQ24_014185	COG4107	phosphonate C-P lyase system protein PhnK
LNQ24_014190	COG4778	phosphonate C-P lyase system protein PhnL
LNQ24_014195	COG3454	Phosphonate metabolism
LNQ24_014200	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
LNQ24_014205	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LNQ24_014210	COG0702	epimerase
LNQ24_014215	COG3787	Belongs to the UPF0306 family
LNQ24_014225	COG1982	Orn Lys Arg decarboxylase major
LNQ24_014230	COG0531	amino acid
LNQ24_014235	COG2827	Endonuclease containing a URI domain
LNQ24_014240	COG3153	acetyltransferase
LNQ24_014245	COG3154	lipid carrier protein
LNQ24_014250	COG0826	peptidase U32
LNQ24_014255	COG0826	peptidase U32
LNQ24_014265	COG0814	amino acid
LNQ24_014270	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNQ24_014275	COG0513	Belongs to the DEAD box helicase family
LNQ24_014285	COG1185	polyribonucleotide nucleotidyltransferase activity
LNQ24_014300	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LNQ24_014310	COG0195	Participates in both transcription termination and antitermination
LNQ24_014330	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LNQ24_014335	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LNQ24_014340	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LNQ24_014350	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LNQ24_014355	COG1534	Rna-binding protein
LNQ24_014365	COG2027	D-alanyl-D-alanine carboxypeptidase
LNQ24_014370	COG0745	RESPONSE REGULATOR receiver
LNQ24_014375	COG0642	Histidine kinase
LNQ24_014380	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LNQ24_014385	COG0697	spore germination
LNQ24_014400	COG0142	geranyltranstransferase activity
LNQ24_014415	COG3423	Transcriptional regulator
LNQ24_014430	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LNQ24_014440	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LNQ24_014445	COG2105	PFAM AIG2 family protein
LNQ24_014450	COG2911	Protein conserved in bacteria
LNQ24_014455	COG0729	surface antigen
LNQ24_014460	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LNQ24_014465	COG1253	flavin adenine dinucleotide binding
LNQ24_014475	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LNQ24_014480	COG1218	3'(2'),5'-bisphosphate nucleotidase
LNQ24_014485	COG0737	Belongs to the 5'-nucleotidase family
LNQ24_014495	COG0545	Peptidyl-prolyl cis-trans isomerase
LNQ24_014500	COG3061	Opacity-associated protein A
LNQ24_014505	COG0359	binds to the 23S rRNA
LNQ24_014510	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LNQ24_014515	COG2965	DNA replication, synthesis of RNA primer
LNQ24_014520	COG0360	Binds together with S18 to 16S ribosomal RNA
LNQ24_014530	COG1073	alpha beta
LNQ24_014550	COG3188	usher protein
LNQ24_014555	COG3121	Chaperone
LNQ24_014575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNQ24_014580	COG0557	exoribonuclease II activity
LNQ24_014585	COG1959	2 iron, 2 sulfur cluster binding
LNQ24_014590	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LNQ24_014595	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LNQ24_014600	COG0330	HflC and HflK could
LNQ24_014605	COG0330	HflC and HflK could
LNQ24_014610	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LNQ24_014620	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LNQ24_014630	COG0860	N-Acetylmuramoyl-L-alanine amidase
LNQ24_014635	COG0802	atpase or kinase
LNQ24_014640	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LNQ24_014640	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LNQ24_014645	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LNQ24_014665	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LNQ24_014670	COG1162	GTPase activity
LNQ24_014675	COG0688	phosphatidylethanolamine metabolic process
LNQ24_014680	COG1511	domain protein
LNQ24_014680	COG3264	Mechanosensitive ion channel
LNQ24_014685	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LNQ24_014690	COG1053	succinate dehydrogenase
LNQ24_014695	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LNQ24_014700	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LNQ24_014705	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LNQ24_014725	COG3188	usher protein
LNQ24_014745	COG3397	chitin binding
LNQ24_014755	COG1509	lysine 2,3-aminomutase activity
LNQ24_014785	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LNQ24_014795	COG4232	protein-disulfide reductase activity
LNQ24_014800	COG1309	transcriptional regulator
LNQ24_014820	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LNQ24_014840	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LNQ24_014845	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LNQ24_014845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LNQ24_014865	COG1028	Short-chain dehydrogenase reductase Sdr
LNQ24_014870	COG1083	cytidylyl-transferase
LNQ24_014870	COG2755	lipolytic protein G-D-S-L family
LNQ24_014890	COG2089	acid synthase
LNQ24_014895	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LNQ24_014900	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LNQ24_014905	COG1086	Polysaccharide biosynthesis protein
LNQ24_014910	COG0425	Belongs to the sulfur carrier protein TusA family
LNQ24_014915	COG2391	methyltransferase activity
LNQ24_014925	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LNQ24_014930	COG3162	membrane
LNQ24_014935	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNQ24_014965	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LNQ24_014970	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LNQ24_014975	COG1739	Uncharacterized protein family UPF0029
LNQ24_014985	COG1250	3-hydroxyacyl-CoA dehydrogenase
LNQ24_014985	COG1024	Enoyl-CoA hydratase
LNQ24_014995	COG0543	2 iron, 2 sulfur cluster binding
LNQ24_015010	COG0250	Participates in transcription elongation, termination and antitermination
LNQ24_015025	COG0805	protein transport
LNQ24_015030	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LNQ24_015035	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LNQ24_015040	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LNQ24_015045	COG3165	ubiquinone biosynthetic process from chorismate
LNQ24_015050	COG2226	methyltransferase
LNQ24_015055	COG1322	Protein conserved in bacteria
LNQ24_015060	COG0586	Pfam SNARE associated Golgi protein
LNQ24_015065	COG1966	Carbon starvation protein
LNQ24_015080	COG0412	Dienelactone hydrolase
LNQ24_015085	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LNQ24_015090	COG0583	DNA-binding transcription factor activity
LNQ24_015095	COG0697	spore germination
LNQ24_015105	COG0584	glycerophosphoryl diester phosphodiesterase
LNQ24_015115	COG0395	ABC-type sugar transport system, permease component
LNQ24_015120	COG1175	transmembrane transport
LNQ24_015125	COG1653	transport
LNQ24_015160	COG0410	ABC transporter
LNQ24_015170	COG4177	L-phenylalanine transmembrane transporter activity
LNQ24_015190	COG1929	Belongs to the glycerate kinase type-1 family
LNQ24_015195	COG2610	gluconate transmembrane transporter activity
LNQ24_015200	COG3835	regulator
LNQ24_015210	COG2177	Part of the ABC transporter FtsEX involved in
LNQ24_015215	COG2884	Cell division ATP-binding protein ftsE
LNQ24_015220	COG0552	protein localization to endoplasmic reticulum
LNQ24_015220	COG0552	protein localization to endoplasmic reticulum
LNQ24_015225	COG0742	ribosomal rna small subunit methyltransferase
LNQ24_015230	COG3776	membrane
LNQ24_015245	COG3714	YhhN family
LNQ24_015260	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LNQ24_015270	COG0247	lactate metabolic process
LNQ24_015280	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LNQ24_015290	COG2271	Major facilitator Superfamily
LNQ24_015295	COG0584	glycerophosphoryl diester phosphodiesterase
LNQ24_015300	COG0561	phosphatase activity
LNQ24_015305	COG2267	carboxylic ester hydrolase activity
LNQ24_015310	COG1280	lysine exporter protein (LysE YggA)
LNQ24_015315	COG0514	ATP-dependent DNA helicase (RecQ)
LNQ24_015320	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
LNQ24_015325	COG2050	protein possibly involved in aromatic compounds catabolism
LNQ24_015345	COG5564	TIM-barrel signal transduction protein
LNQ24_015350	COG5441	Belongs to the UPF0261 family
LNQ24_015360	COG0210	DNA helicase
LNQ24_015365	COG1011	Hydrolase
LNQ24_015370	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LNQ24_015375	COG3159	Protein conserved in bacteria
LNQ24_015380	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LNQ24_015385	COG5567	small periplasmic lipoprotein
LNQ24_015395	COG3072	Adenylate cyclase
LNQ24_015400	COG0181	hydroxymethylbilane synthase activity
LNQ24_015405	COG1587	Uroporphyrinogen-III synthase
LNQ24_015410	COG2959	enzyme of heme biosynthesis
LNQ24_015415	COG3071	HemY protein
LNQ24_015465	COG2244	polysaccharide biosynthetic process
LNQ24_015470	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LNQ24_015475	COG0456	acetyltransferase
LNQ24_015480	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LNQ24_015485	COG1088	dTDP-glucose 4,6-dehydratase activity
LNQ24_015490	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LNQ24_015495	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LNQ24_015500	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LNQ24_015505	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LNQ24_015510	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LNQ24_015515	COG3118	belongs to the thioredoxin family
LNQ24_015525	COG0248	Ppx GppA phosphatase
LNQ24_015535	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LNQ24_015550	COG3397	chitin binding
LNQ24_015560	COG0129	dihydroxy-acid dehydratase activity
LNQ24_015570	COG3978	acetolactate synthase activity
LNQ24_015590	COG3085	chromosome segregation
LNQ24_015595	COG0583	DNA-binding transcription factor activity
LNQ24_015660	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LNQ24_015670	COG0678	peroxiredoxin activity
LNQ24_015670	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LNQ24_015675	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LNQ24_015715	COG0165	Argininosuccinate lyase
LNQ24_015720	COG0137	argininosuccinate synthase activity
LNQ24_015725	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LNQ24_015775	COG0460	homoserine dehydrogenase
LNQ24_015775	COG0527	aspartate kinase activity
LNQ24_015780	COG0626	cystathionine gamma-synthase activity
LNQ24_015785	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
LNQ24_015795	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LNQ24_015800	COG1609	Transcriptional regulator
LNQ24_015805	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LNQ24_015810	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LNQ24_015815	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LNQ24_015820	COG1575	Belongs to the MenA family. Type 1 subfamily
LNQ24_015825	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LNQ24_015830	COG3074	FtsZ-dependent cytokinesis
LNQ24_015835	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LNQ24_015840	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LNQ24_015845	COG1494	fructose-1,6-bisphosphatase
LNQ24_015850	COG2814	Major facilitator Superfamily
LNQ24_015860	COG3152	Membrane
LNQ24_015875	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LNQ24_015885	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNQ24_015890	COG3678	ATP-independent chaperone mediated protein folding
LNQ24_015895	COG0745	RESPONSE REGULATOR receiver
LNQ24_015900	COG2205	protein histidine kinase activity
LNQ24_015905	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LNQ24_015910	COG1045	serine acetyltransferase
LNQ24_015915	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LNQ24_015920	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LNQ24_015925	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LNQ24_015930	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LNQ24_015935	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LNQ24_015940	COG4942	peptidase
LNQ24_015945	COG2861	carbohydrate metabolic process
LNQ24_015960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LNQ24_015965	COG0859	PFAM glycosyl transferase family 9
LNQ24_015970	COG0859	PFAM glycosyl transferase family 9
LNQ24_015975	COG1519	Transferase
LNQ24_015995	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LNQ24_016000	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LNQ24_016005	COG2003	Belongs to the UPF0758 family
LNQ24_016010	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LNQ24_016015	COG0756	dUTP diphosphatase activity
LNQ24_016020	COG1309	transcriptional regulator
LNQ24_016025	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LNQ24_016030	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LNQ24_016035	COG1561	YicC-like family, N-terminal region
LNQ24_016050	COG5001	Diguanylate cyclase
LNQ24_016055	COG1024	Enoyl-CoA hydratase
LNQ24_016060	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNQ24_016070	COG2860	membrane
LNQ24_016075	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LNQ24_016085	COG1758	RNA polymerase activity
LNQ24_016090	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LNQ24_016095	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNQ24_016100	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LNQ24_016105	COG0786	glutamate:sodium symporter activity
LNQ24_016110	COG2233	PERMEase
LNQ24_016115	COG2982	Protein involved in outer membrane biogenesis
LNQ24_016120	COG0456	acetyltransferase
LNQ24_016135	COG1011	Hydrolase
LNQ24_016150	COG3852	Histidine kinase
LNQ24_016160	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LNQ24_016170	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LNQ24_016175	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LNQ24_016175	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LNQ24_016180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LNQ24_016185	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LNQ24_016190	COG3084	Protein conserved in bacteria
LNQ24_016200	COG1763	Mo-molybdopterin cofactor biosynthetic process
LNQ24_016225	COG2186	Transcriptional regulator
LNQ24_016230	COG1609	Transcriptional regulator
LNQ24_016235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNQ24_016245	COG1172	Belongs to the binding-protein-dependent transport system permease family
LNQ24_016250	COG1129	ABC transporter
LNQ24_016255	COG1869	D-ribose catabolic process
LNQ24_016260	COG3158	transport of potassium into the cell
LNQ24_016265	COG0714	Associated with various cellular activities
LNQ24_016270	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LNQ24_016280	COG2502	aspartate--ammonia ligase
LNQ24_016285	COG1522	sequence-specific DNA binding
LNQ24_016290	COG0716	FMN binding
LNQ24_016295	COG0445	tRNA wobble uridine modification
LNQ24_016300	COG0357	Ribosomal RNA small subunit methyltransferase G
LNQ24_016305	COG3312	ion transport
LNQ24_016310	COG0356	it plays a direct role in the translocation of protons across the membrane
LNQ24_016320	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LNQ24_016330	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LNQ24_016335	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LNQ24_016345	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LNQ24_016360	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LNQ24_016365	COG0573	inorganic phosphate transmembrane transporter activity
LNQ24_016370	COG0581	inorganic phosphate transmembrane transporter activity
LNQ24_016380	COG0704	Plays a role in the regulation of phosphate uptake
LNQ24_016385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LNQ24_016390	COG0765	amino acid transport
LNQ24_016395	COG0765	amino acid transport
LNQ24_016400	COG2252	PERMEase
LNQ24_016405	COG0840	transmembrane signaling receptor activity
LNQ24_016415	COG3121	Chaperone
LNQ24_016430	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LNQ24_016435	COG0706	membrane insertase activity
LNQ24_016445	COG0594	ribonuclease P activity
LNQ24_016450	COG0230	Belongs to the bacterial ribosomal protein bL34 family