locus-tag class description LNQ37_000005 PF00308 Bacterial dnaA protein LNQ37_000005 PF08299 Bacterial dnaA protein helix-turn-helix LNQ37_000005 PF11638 DnaA N-terminal domain LNQ37_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain LNQ37_000010 PF02767 DNA polymerase III beta subunit, central domain LNQ37_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain LNQ37_000015 PF02463 RecF/RecN/SMC N terminal domain LNQ37_000020 PF01751 Toprim domain LNQ37_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_000020 PF00986 DNA gyrase B subunit, carboxyl terminus LNQ37_000020 PF00204 DNA gyrase B LNQ37_000020 PF18053 DNA gyrase B subunit insert domain LNQ37_000030 PF12566 Protein of unknown function (DUF3748) LNQ37_000030 PF07676 WD40-like Beta Propeller Repeat LNQ37_000035 PF07119 Protein of unknown function (DUF1375) LNQ37_000040 PF00011 Hsp20/alpha crystallin family LNQ37_000045 PF00011 Hsp20/alpha crystallin family LNQ37_000050 PF02080 TrkA-C domain LNQ37_000050 PF06826 Predicted Permease Membrane Region LNQ37_000055 PF00155 Aminotransferase class I and II LNQ37_000060 PF13488 Glycine zipper LNQ37_000060 PF00691 OmpA family LNQ37_000080 PF03352 Methyladenine glycosylase LNQ37_000090 PF02091 Glycyl-tRNA synthetase alpha subunit LNQ37_000095 PF05746 DALR anticodon binding domain LNQ37_000095 PF02092 Glycyl-tRNA synthetase beta subunit LNQ37_000100 PF11254 Protein of unknown function (DUF3053) LNQ37_000130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ37_000130 PF02378 Phosphotransferase system, EIIC LNQ37_000130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ37_000135 PF01232 Mannitol dehydrogenase Rossmann domain LNQ37_000135 PF08125 Mannitol dehydrogenase C-terminal domain LNQ37_000140 PF05068 Mannitol repressor LNQ37_000145 PF10928 Protein of unknown function (DUF2810) LNQ37_000150 PF03473 MOSC domain LNQ37_000150 PF03475 3-alpha domain LNQ37_000155 PF02203 Tar ligand binding domain homologue LNQ37_000155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_000155 PF00672 HAMP domain LNQ37_000160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNQ37_000160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNQ37_000165 PF02634 FdhD/NarQ family LNQ37_000175 PF09163 Formate dehydrogenase N, transmembrane LNQ37_000175 PF13247 4Fe-4S dicluster domain LNQ37_000180 PF01292 Prokaryotic cytochrome b561 LNQ37_000185 PF04216 Protein involved in formate dehydrogenase formation LNQ37_000190 PF03841 L-seryl-tRNA selenium transferase LNQ37_000190 PF12390 Selenocysteine synthase N terminal LNQ37_000195 PF00009 Elongation factor Tu GTP binding domain LNQ37_000195 PF09107 Elongation factor SelB, winged helix LNQ37_000195 PF03144 Elongation factor Tu domain 2 LNQ37_000195 PF09106 Elongation factor SelB, winged helix LNQ37_000200 PF01427 D-ala-D-ala dipeptidase LNQ37_000205 PF07690 Major Facilitator Superfamily LNQ37_000210 PF01757 Acyltransferase family LNQ37_000245 PF01175 Urocanase Rossmann-like domain LNQ37_000245 PF17391 Urocanase N-terminal domain LNQ37_000245 PF17392 Urocanase C-terminal domain LNQ37_000250 PF00221 Aromatic amino acid lyase LNQ37_000255 PF00324 Amino acid permease LNQ37_000265 PF12146 Serine aminopeptidase, S33 LNQ37_000270 PF00884 Sulfatase LNQ37_000270 PF08019 Phosphoethanolamine transferase EptA/EptB LNQ37_000275 PF00196 Bacterial regulatory proteins, luxR family LNQ37_000275 PF00072 Response regulator receiver domain LNQ37_000280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_000280 PF07730 Histidine kinase LNQ37_000280 PF05231 MASE1 LNQ37_000285 PF07690 Major Facilitator Superfamily LNQ37_000295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_000300 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_000305 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ37_000305 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_000310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_000310 PF00005 ABC transporter LNQ37_000315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_000315 PF00005 ABC transporter LNQ37_000320 PF11658 Cellulose biosynthesis protein BcsG LNQ37_000325 PF11120 Cellulose biosynthesis protein BcsF LNQ37_000330 PF10995 Cellulose biosynthesis GIL LNQ37_000340 PF06564 Cellulose biosynthesis protein BcsQ LNQ37_000345 PF07238 PilZ domain LNQ37_000345 PF00535 Glycosyl transferase family 2 LNQ37_000345 PF03552 Cellulose synthase LNQ37_000350 PF03170 Bacterial cellulose synthase subunit LNQ37_000355 PF01270 Glycosyl hydrolases family 8 LNQ37_000360 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LNQ37_000365 PF00672 HAMP domain LNQ37_000365 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_000365 PF17154 Gammaproteobacterial periplasmic sensor domain LNQ37_000365 PF00563 EAL domain LNQ37_000370 PF00375 Sodium:dicarboxylate symporter family LNQ37_000375 PF00675 Insulinase (Peptidase family M16) LNQ37_000375 PF05193 Peptidase M16 inactive domain LNQ37_000380 PF00294 pfkB family carbohydrate kinase LNQ37_000385 PF01361 Tautomerase enzyme LNQ37_000390 PF00563 EAL domain LNQ37_000395 PF02611 CDP-diacylglycerol pyrophosphatase LNQ37_000400 PF03631 Virulence factor BrkB LNQ37_000405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_000405 PF03466 LysR substrate binding domain LNQ37_000410 PF00375 Sodium:dicarboxylate symporter family LNQ37_000415 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ37_000420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_000420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ37_000425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LNQ37_000430 PF01432 Peptidase family M3 LNQ37_000435 PF04445 Putative SAM-dependent methyltransferase LNQ37_000440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LNQ37_000440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LNQ37_000445 PF00582 Universal stress protein family LNQ37_000450 PF10625 Universal stress protein B (UspB) LNQ37_000455 PF01384 Phosphate transporter family LNQ37_000465 PF01810 LysE type translocator LNQ37_000470 PF00583 Acetyltransferase (GNAT) family LNQ37_000480 PF17954 Quercetinase C-terminal cupin domain LNQ37_000480 PF02678 Pirin LNQ37_000485 PF00356 Bacterial regulatory proteins, lacI family LNQ37_000485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ37_000490 PF02447 GntP family permease LNQ37_000495 PF01202 Shikimate kinase LNQ37_000500 PF01914 MarC family integral membrane protein LNQ37_000505 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ37_000505 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ37_000510 PF07694 5TMR of 5TMR-LYT LNQ37_000510 PF06580 Histidine kinase LNQ37_000515 PF00128 Alpha amylase, catalytic domain LNQ37_000515 PF02806 Alpha amylase, C-terminal all-beta domain LNQ37_000515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNQ37_000520 PF00128 Alpha amylase, catalytic domain LNQ37_000520 PF18390 Glycogen debranching enzyme C-terminal domain LNQ37_000520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNQ37_000525 PF00483 Nucleotidyl transferase LNQ37_000530 PF08323 Starch synthase catalytic domain LNQ37_000530 PF00534 Glycosyl transferases group 1 LNQ37_000535 PF00343 Carbohydrate phosphorylase LNQ37_000540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LNQ37_000540 PF01266 FAD dependent oxidoreductase LNQ37_000545 PF00455 DeoR C terminal sensor domain LNQ37_000545 PF08220 DeoR-like helix-turn-helix domain LNQ37_000550 PF01694 Rhomboid family LNQ37_000550 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LNQ37_000555 PF00581 Rhodanese-like domain LNQ37_000560 PF17874 MalT-like TPR region LNQ37_000560 PF00196 Bacterial regulatory proteins, luxR family LNQ37_000565 PF00343 Carbohydrate phosphorylase LNQ37_000570 PF02446 4-alpha-glucanotransferase LNQ37_000575 PF01106 NifU-like domain LNQ37_000575 PF01521 Iron-sulphur cluster biosynthesis LNQ37_000580 PF00156 Phosphoribosyl transferase domain LNQ37_000585 PF00561 alpha/beta hydrolase fold LNQ37_000595 PF09012 FeoC like transcriptional regulator LNQ37_000600 PF17910 FeoB cytosolic helical domain LNQ37_000600 PF02421 Ferrous iron transport protein B LNQ37_000600 PF07670 Nucleoside recognition LNQ37_000600 PF07664 Ferrous iron transport protein B C terminus LNQ37_000605 PF04023 FeoA domain LNQ37_000610 PF00575 S1 RNA binding domain LNQ37_000610 PF16921 Tex protein YqgF-like domain LNQ37_000610 PF09371 Tex-like protein N-terminal domain LNQ37_000610 PF17674 HHH domain LNQ37_000635 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ37_000635 PF03449 Transcription elongation factor, N-terminal LNQ37_000640 PF00072 Response regulator receiver domain LNQ37_000640 PF00486 Transcriptional regulatory protein, C terminal LNQ37_000645 PF00672 HAMP domain LNQ37_000645 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_000645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_000650 PF01293 Phosphoenolpyruvate carboxykinase LNQ37_000655 PF01430 Hsp33 protein LNQ37_000660 PF01479 S4 domain LNQ37_000665 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_000670 PF07095 Intracellular growth attenuator protein IgaA LNQ37_000675 PF00293 NUDIX domain LNQ37_000680 PF17092 Penicillin-binding protein OB-like domain LNQ37_000680 PF00905 Penicillin binding protein transpeptidase domain LNQ37_000680 PF00912 Transglycosylase LNQ37_000705 PF03958 Bacterial type II/III secretion system short domain LNQ37_000705 PF00263 Bacterial type II and III secretion system protein LNQ37_000710 PF01202 Shikimate kinase LNQ37_000715 PF01761 3-dehydroquinate synthase LNQ37_000720 PF05036 Sporulation related domain LNQ37_000725 PF02086 D12 class N6 adenine-specific DNA methyltransferase LNQ37_000730 PF00834 Ribulose-phosphate 3 epimerase family LNQ37_000735 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_000740 PF00579 tRNA synthetases class I (W and Y) LNQ37_000745 PF10414 Sirohaem synthase dimerisation region LNQ37_000745 PF14824 Sirohaem biosynthesis protein central LNQ37_000745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ37_000750 PF01226 Formate/nitrite transporter LNQ37_000755 PF13806 Rieske-like [2Fe-2S] domain LNQ37_000760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LNQ37_000760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_000760 PF18267 Rubredoxin NAD+ reductase C-terminal domain LNQ37_000760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LNQ37_000760 PF04324 BFD-like [2Fe-2S] binding domain LNQ37_000765 PF07969 Amidohydrolase family LNQ37_000770 PF07690 Major Facilitator Superfamily LNQ37_000785 PF00356 Bacterial regulatory proteins, lacI family LNQ37_000790 PF02056 Family 4 glycosyl hydrolase LNQ37_000790 PF11975 Family 4 glycosyl hydrolase C-terminal domain LNQ37_000795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNQ37_000800 PF00117 Glutamine amidotransferase class-I LNQ37_000805 PF00202 Aminotransferase class-III LNQ37_000810 PF12805 FUSC-like inner membrane protein yccS LNQ37_000815 PF00027 Cyclic nucleotide-binding domain LNQ37_000815 PF13545 Crp-like helix-turn-helix domain LNQ37_000820 PF02566 OsmC-like protein LNQ37_000840 PF00156 Phosphoribosyl transferase domain LNQ37_000850 PF00485 Phosphoribulokinase / Uridine kinase family LNQ37_000855 PF06794 Uncharacterised protein family (UPF0270) LNQ37_000860 PF00561 alpha/beta hydrolase fold LNQ37_000865 PF01810 LysE type translocator LNQ37_000870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ37_000875 PF00535 Glycosyl transferase family 2 LNQ37_000880 PF00005 ABC transporter LNQ37_000880 PF12848 ABC transporter LNQ37_000885 PF02525 Flavodoxin-like fold LNQ37_000890 PF00999 Sodium/hydrogen exchanger family LNQ37_000890 PF02254 TrkA-N domain LNQ37_000895 PF09526 Probable metal-binding protein (DUF2387) LNQ37_000900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ37_000905 PF04102 SlyX LNQ37_000910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNQ37_000910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ37_000915 PF08348 YheO-like PAS domain LNQ37_000915 PF13309 HTH domain LNQ37_000920 PF02635 DsrE/DsrF-like family LNQ37_000925 PF02635 DsrE/DsrF-like family LNQ37_000930 PF04077 DsrH like protein LNQ37_000935 PF00164 Ribosomal protein S12/S23 LNQ37_000940 PF00177 Ribosomal protein S7p/S5e LNQ37_000945 PF03144 Elongation factor Tu domain 2 LNQ37_000945 PF00009 Elongation factor Tu GTP binding domain LNQ37_000945 PF03764 Elongation factor G, domain IV LNQ37_000945 PF14492 Elongation Factor G, domain II LNQ37_000945 PF00679 Elongation factor G C-terminus LNQ37_000950 PF03143 Elongation factor Tu C-terminal domain LNQ37_000950 PF03144 Elongation factor Tu domain 2 LNQ37_000950 PF00009 Elongation factor Tu GTP binding domain LNQ37_000955 PF04324 BFD-like [2Fe-2S] binding domain LNQ37_000960 PF00210 Ferritin-like domain LNQ37_000965 PF00338 Ribosomal protein S10p/S20e LNQ37_000970 PF00297 Ribosomal protein L3 LNQ37_000975 PF00573 Ribosomal protein L4/L1 family LNQ37_000980 PF00276 Ribosomal protein L23 LNQ37_000985 PF03947 Ribosomal Proteins L2, C-terminal domain LNQ37_000985 PF00181 Ribosomal Proteins L2, RNA binding domain LNQ37_000990 PF00203 Ribosomal protein S19 LNQ37_000995 PF00237 Ribosomal protein L22p/L17e LNQ37_001000 PF07650 KH domain LNQ37_001000 PF00189 Ribosomal protein S3, C-terminal domain LNQ37_001005 PF00252 Ribosomal protein L16p/L10e LNQ37_001010 PF00831 Ribosomal L29 protein LNQ37_001015 PF00366 Ribosomal protein S17 LNQ37_001020 PF00238 Ribosomal protein L14p/L23e LNQ37_001025 PF00467 KOW motif LNQ37_001025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LNQ37_001030 PF00673 ribosomal L5P family C-terminus LNQ37_001030 PF00281 Ribosomal protein L5 LNQ37_001035 PF00253 Ribosomal protein S14p/S29e LNQ37_001040 PF00410 Ribosomal protein S8 LNQ37_001045 PF00347 Ribosomal protein L6 LNQ37_001050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LNQ37_001055 PF00333 Ribosomal protein S5, N-terminal domain LNQ37_001055 PF03719 Ribosomal protein S5, C-terminal domain LNQ37_001060 PF00327 Ribosomal protein L30p/L7e LNQ37_001065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LNQ37_001070 PF00344 SecY translocase LNQ37_001075 PF00444 Ribosomal protein L36 LNQ37_001080 PF00416 Ribosomal protein S13/S18 LNQ37_001085 PF00411 Ribosomal protein S11 LNQ37_001090 PF01479 S4 domain LNQ37_001090 PF00163 Ribosomal protein S4/S9 N-terminal domain LNQ37_001095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LNQ37_001095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LNQ37_001095 PF01000 RNA polymerase Rpb3/RpoA insert domain LNQ37_001100 PF01196 Ribosomal protein L17 LNQ37_001105 PF13411 MerR HTH family regulatory protein LNQ37_001110 PF03889 Alternative ribosome-rescue factor A LNQ37_001115 PF01741 Large-conductance mechanosensitive channel, MscL LNQ37_001120 PF02080 TrkA-C domain LNQ37_001120 PF02254 TrkA-N domain LNQ37_001125 PF01189 16S rRNA methyltransferase RsmB/F LNQ37_001125 PF01029 NusB family LNQ37_001130 PF00551 Formyl transferase LNQ37_001130 PF02911 Formyl transferase, C-terminal domain LNQ37_001135 PF01327 Polypeptide deformylase LNQ37_001140 PF02481 DNA recombination-mediator protein A LNQ37_001140 PF17782 DprA winged helix domain LNQ37_001145 PF04361 Protein of unknown function (DUF494) LNQ37_001150 PF01396 Topoisomerase DNA binding C4 zinc finger LNQ37_001155 PF01300 Telomere recombination LNQ37_001160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LNQ37_001160 PF01488 Shikimate / quinate 5-dehydrogenase LNQ37_001160 PF08501 Shikimate dehydrogenase substrate binding domain LNQ37_001165 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_001190 PF00474 Sodium:solute symporter family LNQ37_001195 PF04341 Protein of unknown function, DUF485 LNQ37_001200 PF16177 Acetyl-coenzyme A synthetase N-terminus LNQ37_001200 PF00501 AMP-binding enzyme LNQ37_001200 PF13193 AMP-binding enzyme C-terminal domain LNQ37_001205 PF00375 Sodium:dicarboxylate symporter family LNQ37_001220 PF02683 Cytochrome C biogenesis protein transmembrane region LNQ37_001220 PF11412 Disulphide bond corrector protein DsbC LNQ37_001225 PF03091 CutA1 divalent ion tolerance protein LNQ37_001230 PF03605 Anaerobic c4-dicarboxylate membrane transporter LNQ37_001235 PF10415 Fumarase C C-terminus LNQ37_001235 PF00206 Lyase LNQ37_001240 PF04186 FxsA cytoplasmic membrane protein LNQ37_001245 PF00166 Chaperonin 10 Kd subunit LNQ37_001250 PF00118 TCP-1/cpn60 chaperonin family LNQ37_001255 PF13698 Domain of unknown function (DUF4156) LNQ37_001260 PF04055 Radical SAM superfamily LNQ37_001265 PF01132 Elongation factor P (EF-P) OB domain LNQ37_001265 PF08207 Elongation factor P (EF-P) KOW-like domain LNQ37_001265 PF09285 Elongation factor P, C-terminal LNQ37_001270 PF18416 N-acetylglucosamine binding protein domain 2 LNQ37_001270 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ37_001275 PF00196 Bacterial regulatory proteins, luxR family LNQ37_001285 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_001285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_001290 PF13953 PapC C-terminal domain LNQ37_001290 PF00577 Outer membrane usher protein LNQ37_001290 PF13954 PapC N-terminal domain LNQ37_001295 PF00419 Fimbrial protein LNQ37_001300 PF00893 Small Multidrug Resistance protein LNQ37_001305 PF08212 Lipocalin-like domain LNQ37_001310 PF02313 Fumarate reductase subunit D LNQ37_001315 PF02300 Fumarate reductase subunit C LNQ37_001320 PF13183 4Fe-4S dicluster domain LNQ37_001320 PF13085 2Fe-2S iron-sulfur cluster binding domain LNQ37_001325 PF02910 Fumarate reductase flavoprotein C-term LNQ37_001325 PF00890 FAD binding domain LNQ37_001330 PF00152 tRNA synthetases class II (D, K and N) LNQ37_001335 PF12795 Mechanosensitive ion channel porin domain LNQ37_001335 PF12794 Mechanosensitive ion channel inner membrane domain 1 LNQ37_001335 PF00924 Mechanosensitive ion channel LNQ37_001340 PF02666 Phosphatidylserine decarboxylase LNQ37_001345 PF03193 RsgA GTPase LNQ37_001350 PF00929 Exonuclease LNQ37_001370 PF08331 Domain of unknown function (DUF1730) LNQ37_001375 PF01256 Carbohydrate kinase LNQ37_001375 PF03853 YjeF-related protein N-terminus LNQ37_001380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LNQ37_001385 PF01520 N-acetylmuramoyl-L-alanine amidase LNQ37_001390 PF01119 DNA mismatch repair protein, C-terminal domain LNQ37_001390 PF08676 MutL C terminal dimerisation domain LNQ37_001400 PF17209 Hfq protein LNQ37_001405 PF01926 50S ribosome-binding GTPase LNQ37_001405 PF16360 GTP-binding GTPase Middle Region LNQ37_001405 PF13167 GTP-binding GTPase N-terminal LNQ37_001410 PF01145 SPFH domain / Band 7 family LNQ37_001410 PF12221 Bacterial membrane protein N terminal LNQ37_001415 PF01145 SPFH domain / Band 7 family LNQ37_001420 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LNQ37_001425 PF00709 Adenylosuccinate synthetase LNQ37_001430 PF02082 Transcriptional regulator LNQ37_001435 PF17876 Cold shock domain LNQ37_001435 PF08461 Ribonuclease R winged-helix domain LNQ37_001435 PF08206 Ribonuclease B OB domain LNQ37_001435 PF00773 RNB domain LNQ37_001435 PF00575 S1 RNA binding domain LNQ37_001440 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNQ37_001440 PF00588 SpoU rRNA Methylase family LNQ37_001460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_001465 PF13953 PapC C-terminal domain LNQ37_001465 PF13954 PapC N-terminal domain LNQ37_001465 PF00577 Outer membrane usher protein LNQ37_001485 PF00326 Prolyl oligopeptidase family LNQ37_001495 PF01250 Ribosomal protein S6 LNQ37_001500 PF00436 Single-strand binding protein family LNQ37_001505 PF01084 Ribosomal protein S18 LNQ37_001510 PF03948 Ribosomal protein L9, C-terminal domain LNQ37_001510 PF01281 Ribosomal protein L9, N-terminal domain LNQ37_001515 PF04225 Opacity-associated protein A LysM-like domain LNQ37_001515 PF08525 Opacity-associated protein A N-terminal motif LNQ37_001520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ37_001520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNQ37_001525 PF01814 Hemerythrin HHE cation binding domain LNQ37_001525 PF04405 Domain of Unknown function (DUF542) LNQ37_001530 PF02872 5'-nucleotidase, C-terminal domain LNQ37_001530 PF00149 Calcineurin-like phosphoesterase LNQ37_001535 PF00459 Inositol monophosphatase family LNQ37_001540 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LNQ37_001545 PF06526 Protein of unknown function (DUF1107) LNQ37_001550 PF00571 CBS domain LNQ37_001550 PF03471 Transporter associated domain LNQ37_001550 PF01595 Cyclin M transmembrane N-terminal domain LNQ37_001555 PF01625 Peptide methionine sulfoxide reductase LNQ37_001560 PF01103 Surface antigen LNQ37_001560 PF17243 POTRA domain TamA domain 1 LNQ37_001560 PF07244 Surface antigen variable number repeat LNQ37_001565 PF04357 TamB, inner membrane protein subunit of TAM complex LNQ37_001570 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LNQ37_001575 PF00719 Inorganic pyrophosphatase LNQ37_001580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LNQ37_001585 PF01225 Mur ligase family, catalytic domain LNQ37_001585 PF02875 Mur ligase family, glutamate ligase domain LNQ37_001585 PF08245 Mur ligase middle domain LNQ37_001590 PF02863 Arginine repressor, C-terminal domain LNQ37_001590 PF01316 Arginine repressor, DNA binding domain LNQ37_001595 PF00056 lactate/malate dehydrogenase, NAD binding domain LNQ37_001595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LNQ37_001600 PF13693 Winged helix-turn-helix DNA-binding LNQ37_001615 PF00348 Polyprenyl synthetase LNQ37_001620 PF00829 Ribosomal prokaryotic L21 protein LNQ37_001625 PF01016 Ribosomal L27 protein LNQ37_001630 PF00892 EamA-like transporter family LNQ37_001635 PF01018 GTP1/OBG LNQ37_001635 PF01926 50S ribosome-binding GTPase LNQ37_001640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_001640 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_001640 PF00672 HAMP domain LNQ37_001645 PF00486 Transcriptional regulatory protein, C terminal LNQ37_001645 PF00072 Response regulator receiver domain LNQ37_001650 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LNQ37_001655 PF03449 Transcription elongation factor, N-terminal LNQ37_001655 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ37_001660 PF01985 CRS1 / YhbY (CRM) domain LNQ37_001665 PF01728 FtsJ-like methyltransferase LNQ37_001670 PF06480 FtsH Extracellular LNQ37_001670 PF17862 AAA+ lid domain LNQ37_001670 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_001670 PF01434 Peptidase family M41 LNQ37_001675 PF00809 Pterin binding enzyme LNQ37_001680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNQ37_001680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNQ37_001680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNQ37_001680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNQ37_001685 PF03840 Preprotein translocase SecG subunit LNQ37_001700 PF02576 RimP N-terminal domain LNQ37_001700 PF17384 RimP C-terminal SH3 domain LNQ37_001705 PF00575 S1 RNA binding domain LNQ37_001705 PF08529 NusA N-terminal domain LNQ37_001705 PF13184 NusA-like KH domain LNQ37_001710 PF03144 Elongation factor Tu domain 2 LNQ37_001710 PF04760 Translation initiation factor IF-2, N-terminal region LNQ37_001710 PF08364 Bacterial translation initiation factor IF-2 associated region LNQ37_001710 PF11987 Translation-initiation factor 2 LNQ37_001710 PF00009 Elongation factor Tu GTP binding domain LNQ37_001715 PF02033 Ribosome-binding factor A LNQ37_001720 PF09157 Pseudouridine synthase II TruB, C-terminal LNQ37_001720 PF01509 TruB family pseudouridylate synthase (N terminal domain) LNQ37_001720 PF16198 tRNA pseudouridylate synthase B C-terminal domain LNQ37_001725 PF00312 Ribosomal protein S15 LNQ37_001730 PF00013 KH domain LNQ37_001730 PF01138 3' exoribonuclease family, domain 1 LNQ37_001730 PF03725 3' exoribonuclease family, domain 2 LNQ37_001730 PF00575 S1 RNA binding domain LNQ37_001730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LNQ37_001735 PF07719 Tetratricopeptide repeat LNQ37_001735 PF13181 Tetratricopeptide repeat LNQ37_001740 PF03880 DbpA RNA binding domain LNQ37_001740 PF00270 DEAD/DEAH box helicase LNQ37_001740 PF12343 Cold shock protein DEAD box A LNQ37_001740 PF00271 Helicase conserved C-terminal domain LNQ37_001745 PF00296 Luciferase-like monooxygenase LNQ37_001755 PF03313 Serine dehydratase alpha chain LNQ37_001760 PF01136 Peptidase family U32 LNQ37_001765 PF01136 Peptidase family U32 LNQ37_001770 PF02036 SCP-2 sterol transfer family LNQ37_001775 PF13508 Acetyltransferase (GNAT) domain LNQ37_001780 PF01541 GIY-YIG catalytic domain LNQ37_001785 PF13520 Amino acid permease LNQ37_001790 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ37_001790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ37_001790 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ37_001795 PF10940 Protein of unknown function (DUF2618) LNQ37_001805 PF13460 NAD(P)H-binding LNQ37_001810 PF12706 Beta-lactamase superfamily domain LNQ37_001820 PF07969 Amidohydrolase family LNQ37_001825 PF00005 ABC transporter LNQ37_001830 PF00005 ABC transporter LNQ37_001835 PF06007 Phosphonate metabolism protein PhnJ LNQ37_001840 PF05861 Bacterial phosphonate metabolism protein (PhnI) LNQ37_001845 PF05845 Bacterial phosphonate metabolism protein (PhnH) LNQ37_001850 PF06754 Phosphonate metabolism protein PhnG LNQ37_001860 PF03477 ATP cone domain LNQ37_001860 PF13597 Anaerobic ribonucleoside-triphosphate reductase LNQ37_001865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNQ37_001865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNQ37_001870 PF06877 Regulator of ribonuclease activity B LNQ37_001875 PF00583 Acetyltransferase (GNAT) family LNQ37_001880 PF00133 tRNA synthetases class I (I, L, M and V) LNQ37_001880 PF10458 Valyl tRNA synthetase tRNA binding arm LNQ37_001880 PF08264 Anticodon-binding domain of tRNA LNQ37_001885 PF04364 DNA polymerase III chi subunit, HolC LNQ37_001890 PF00883 Cytosol aminopeptidase family, catalytic domain LNQ37_001890 PF02789 Cytosol aminopeptidase family, N-terminal domain LNQ37_001895 PF03739 Lipopolysaccharide export system permease LptF/LptG LNQ37_001900 PF03739 Lipopolysaccharide export system permease LptF/LptG LNQ37_001910 PF13356 Arm DNA-binding domain LNQ37_001910 PF00589 Phage integrase family LNQ37_001925 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_001925 PF00589 Phage integrase family LNQ37_001990 PF13361 UvrD-like helicase C-terminal domain LNQ37_001990 PF00580 UvrD/REP helicase N-terminal domain LNQ37_002040 PF01344 Kelch motif LNQ37_002045 PF06178 Oligogalacturonate-specific porin protein (KdgM) LNQ37_002050 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LNQ37_002050 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain LNQ37_002050 PF02278 Polysaccharide lyase family 8, super-sandwich domain LNQ37_002065 PF02278 Polysaccharide lyase family 8, super-sandwich domain LNQ37_002065 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LNQ37_002065 PF09093 Lyase, catalytic LNQ37_002065 PF09092 Lyase, N terminal LNQ37_002070 PF00884 Sulfatase LNQ37_002075 PF00455 DeoR C terminal sensor domain LNQ37_002075 PF08220 DeoR-like helix-turn-helix domain LNQ37_002080 PF08013 Tagatose 6 phosphate kinase LNQ37_002085 PF01380 SIS domain LNQ37_002090 PF03830 PTS system sorbose subfamily IIB component LNQ37_002095 PF03609 PTS system sorbose-specific iic component LNQ37_002100 PF03613 PTS system mannose/fructose/sorbose family IID component LNQ37_002110 PF01979 Amidohydrolase family LNQ37_002115 PF04962 KduI/IolB family LNQ37_002125 PF07470 Glycosyl Hydrolase Family 88 LNQ37_002130 PF13186 Iron-sulfur cluster-binding domain LNQ37_002130 PF04055 Radical SAM superfamily LNQ37_002135 PF00884 Sulfatase LNQ37_002145 PF01116 Fructose-bisphosphate aldolase class-II LNQ37_002155 PF10696 Protein of unknown function (DUF2501) LNQ37_002160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ37_002175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ37_002180 PF00873 AcrB/AcrD/AcrF family LNQ37_002185 PF00465 Iron-containing alcohol dehydrogenase LNQ37_002190 PF02733 Dak1 domain LNQ37_002195 PF02734 DAK2 domain LNQ37_002200 PF05524 PEP-utilising enzyme, N-terminal LNQ37_002200 PF03610 PTS system fructose IIA component LNQ37_002200 PF00391 PEP-utilising enzyme, mobile domain LNQ37_002200 PF00381 PTS HPr component phosphorylation site LNQ37_002205 PF02954 Bacterial regulatory protein, Fis family LNQ37_002205 PF00989 PAS fold LNQ37_002205 PF00158 Sigma-54 interaction domain LNQ37_002210 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_002215 PF07256 Protein of unknown function (DUF1435) LNQ37_002235 PF08468 Methyltransferase small domain N-terminal LNQ37_002235 PF05175 Methyltransferase small domain LNQ37_002240 PF03603 DNA polymerase III psi subunit LNQ37_002245 PF00583 Acetyltransferase (GNAT) family LNQ37_002250 PF00009 Elongation factor Tu GTP binding domain LNQ37_002250 PF16658 Class II release factor RF3, C-terminal domain LNQ37_002250 PF03144 Elongation factor Tu domain 2 LNQ37_002255 PF04972 BON domain LNQ37_002260 PF07043 Protein of unknown function (DUF1328) LNQ37_002265 PF01734 Patatin-like phospholipase LNQ37_002270 PF01026 TatD related DNase LNQ37_002275 PF07670 Nucleoside recognition LNQ37_002275 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ37_002275 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ37_002280 PF01791 DeoC/LacD family aldolase LNQ37_002285 PF02885 Glycosyl transferase family, helical bundle domain LNQ37_002285 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LNQ37_002285 PF00591 Glycosyl transferase family, a/b domain LNQ37_002290 PF01676 Metalloenzyme superfamily LNQ37_002295 PF01048 Phosphorylase superfamily LNQ37_002300 PF10144 Bacterial virulence factor haemolysin LNQ37_002305 PF18429 Domain of unknown function (DUF5609) LNQ37_002310 PF18073 Rubredoxin metal binding domain LNQ37_002315 PF13521 AAA domain LNQ37_002315 PF01381 Helix-turn-helix LNQ37_002320 PF00005 ABC transporter LNQ37_002320 PF12848 ABC transporter LNQ37_002335 PF00689 Cation transporting ATPase, C-terminus LNQ37_002335 PF00690 Cation transporter/ATPase, N-terminus LNQ37_002340 PF01464 Transglycosylase SLT domain LNQ37_002340 PF14718 Soluble lytic murein transglycosylase L domain LNQ37_002345 PF01371 Trp repressor protein LNQ37_002350 PF01931 Protein of unknown function DUF84 LNQ37_002355 PF00300 Histidine phosphatase superfamily (branch 1) LNQ37_002360 PF12833 Helix-turn-helix domain LNQ37_002360 PF06445 GyrI-like small molecule binding domain LNQ37_002365 PF05981 CreA protein LNQ37_002370 PF00072 Response regulator receiver domain LNQ37_002370 PF00486 Transcriptional regulatory protein, C terminal LNQ37_002380 PF08254 Threonine leader peptide LNQ37_002385 PF01842 ACT domain LNQ37_002385 PF13840 ACT domain LNQ37_002385 PF00742 Homoserine dehydrogenase LNQ37_002385 PF03447 Homoserine dehydrogenase, NAD binding domain LNQ37_002385 PF00696 Amino acid kinase family LNQ37_002390 PF08544 GHMP kinases C terminal LNQ37_002390 PF00288 GHMP kinases N terminal domain LNQ37_002395 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_002395 PF14821 Threonine synthase N terminus LNQ37_002400 PF03883 Peroxide stress protein YaaA LNQ37_002405 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNQ37_002410 PF00994 Probable molybdopterin binding domain LNQ37_002415 PF07690 Major Facilitator Superfamily LNQ37_002425 PF01184 GPR1/FUN34/yaaH family LNQ37_002430 PF00012 Hsp70 protein LNQ37_002435 PF00684 DnaJ central domain LNQ37_002435 PF01556 DnaJ C terminal domain LNQ37_002435 PF00226 DnaJ domain LNQ37_002440 PF06965 Na+/H+ antiporter 1 LNQ37_002445 PF03466 LysR substrate binding domain LNQ37_002445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_002450 PF01649 Ribosomal protein S20 LNQ37_002455 PF06574 FAD synthetase LNQ37_002455 PF01687 Riboflavin kinase LNQ37_002460 PF00133 tRNA synthetases class I (I, L, M and V) LNQ37_002460 PF06827 Zinc finger found in FPG and IleRS LNQ37_002460 PF08264 Anticodon-binding domain of tRNA LNQ37_002465 PF01252 Signal peptidase (SPase) II LNQ37_002470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ37_002475 PF02401 LytB protein LNQ37_002480 PF01113 Dihydrodipicolinate reductase, N-terminus LNQ37_002480 PF05173 Dihydrodipicolinate reductase, C-terminus LNQ37_002485 PF00117 Glutamine amidotransferase class-I LNQ37_002485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LNQ37_002490 PF02142 MGS-like domain LNQ37_002490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNQ37_002490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LNQ37_002495 PF01810 LysE type translocator LNQ37_002500 PF06738 Putative threonine/serine exporter LNQ37_002505 PF12821 Threonine/Serine exporter, ThrE LNQ37_002510 PF00186 Dihydrofolate reductase LNQ37_002520 PF00149 Calcineurin-like phosphoesterase LNQ37_002525 PF04379 ApaG domain LNQ37_002530 PF00398 Ribosomal RNA adenine dimethylase LNQ37_002535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LNQ37_002540 PF00639 PPIC-type PPIASE domain LNQ37_002540 PF09312 SurA N-terminal domain LNQ37_002545 PF04453 LPS transport system D LNQ37_002545 PF03968 OstA-like protein LNQ37_002550 PF05099 Tellurite resistance protein TerB LNQ37_002550 PF00226 DnaJ domain LNQ37_002555 PF00849 RNA pseudouridylate synthase LNQ37_002560 PF00271 Helicase conserved C-terminal domain LNQ37_002560 PF12137 RNA polymerase recycling family C-terminal LNQ37_002560 PF00176 SNF2 family N-terminal domain LNQ37_002560 PF18339 RapA N-terminal Tudor like domain 1 LNQ37_002560 PF18337 RapA N-terminal Tudor like domain LNQ37_002565 PF00136 DNA polymerase family B LNQ37_002565 PF03104 DNA polymerase family B, exonuclease domain LNQ37_002570 PF09335 SNARE associated Golgi protein LNQ37_002575 PF00005 ABC transporter LNQ37_002580 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_002590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_002590 PF12793 Sugar transport-related sRNA regulator N-term LNQ37_002600 PF07690 Major Facilitator Superfamily LNQ37_002605 PF00694 Aconitase C-terminal domain LNQ37_002610 PF00330 Aconitase family (aconitate hydratase) LNQ37_002615 PF00180 Isocitrate/isopropylmalate dehydrogenase LNQ37_002620 PF00682 HMGL-like LNQ37_002620 PF08502 LeuA allosteric (dimerisation) domain LNQ37_002625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_002625 PF03466 LysR substrate binding domain LNQ37_002630 PF00501 AMP-binding enzyme LNQ37_002635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ37_002635 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ37_002635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ37_002640 PF10369 Small subunit of acetolactate synthase LNQ37_002645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ37_002645 PF00356 Bacterial regulatory proteins, lacI family LNQ37_002650 PF01797 Transposase IS200 like LNQ37_002655 PF07282 Putative transposase DNA-binding domain LNQ37_002655 PF01385 Probable transposase LNQ37_002655 PF12323 Helix-turn-helix domain LNQ37_002660 PF06610 L-alanine exporter LNQ37_002665 PF02381 MraZ protein, putative antitoxin-like LNQ37_002670 PF01795 MraW methylase family LNQ37_002675 PF04999 Cell division protein FtsL LNQ37_002680 PF00905 Penicillin binding protein transpeptidase domain LNQ37_002680 PF03717 Penicillin-binding Protein dimerisation domain LNQ37_002685 PF02875 Mur ligase family, glutamate ligase domain LNQ37_002685 PF01225 Mur ligase family, catalytic domain LNQ37_002685 PF08245 Mur ligase middle domain LNQ37_002690 PF02875 Mur ligase family, glutamate ligase domain LNQ37_002690 PF08245 Mur ligase middle domain LNQ37_002690 PF01225 Mur ligase family, catalytic domain LNQ37_002695 PF00953 Glycosyl transferase family 4 LNQ37_002695 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LNQ37_002700 PF02875 Mur ligase family, glutamate ligase domain LNQ37_002700 PF08245 Mur ligase middle domain LNQ37_002705 PF01098 Cell cycle protein LNQ37_002710 PF04101 Glycosyltransferase family 28 C-terminal domain LNQ37_002710 PF03033 Glycosyltransferase family 28 N-terminal domain LNQ37_002715 PF08245 Mur ligase middle domain LNQ37_002715 PF02875 Mur ligase family, glutamate ligase domain LNQ37_002715 PF01225 Mur ligase family, catalytic domain LNQ37_002720 PF01820 D-ala D-ala ligase N-terminus LNQ37_002720 PF07478 D-ala D-ala ligase C-terminus LNQ37_002725 PF08478 POTRA domain, FtsQ-type LNQ37_002725 PF03799 Cell division protein FtsQ LNQ37_002730 PF02491 SHS2 domain inserted in FTSA LNQ37_002735 PF00091 Tubulin/FtsZ family, GTPase domain LNQ37_002735 PF12327 FtsZ family, C-terminal domain LNQ37_002740 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LNQ37_002750 PF06558 Secretion monitor precursor protein (SecM) LNQ37_002755 PF02810 SEC-C motif LNQ37_002755 PF07517 SecA DEAD-like domain LNQ37_002755 PF01043 SecA preprotein cross-linking domain LNQ37_002755 PF07516 SecA Wing and Scaffold domain LNQ37_002760 PF00293 NUDIX domain LNQ37_002765 PF03884 DNA gyrase inhibitor YacG LNQ37_002770 PF07072 Cell division protein LNQ37_002775 PF01121 Dephospho-CoA kinase LNQ37_002780 PF00478 IMP dehydrogenase / GMP reductase domain LNQ37_002785 PF00482 Type II secretion system (T2SS), protein F LNQ37_002790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNQ37_002790 PF00437 Type II/IV secretion system protein LNQ37_002795 PF07963 Prokaryotic N-terminal methylation motif LNQ37_002800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LNQ37_002800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LNQ37_002805 PF01510 N-acetylmuramoyl-L-alanine amidase LNQ37_002810 PF17113 Regulatory signalling modulator protein AmpE LNQ37_002815 PF00324 Amino acid permease LNQ37_002820 PF00392 Bacterial regulatory proteins, gntR family LNQ37_002820 PF07729 FCD domain LNQ37_002825 PF17831 Pyruvate dehydrogenase E1 component middle domain LNQ37_002825 PF00456 Transketolase, thiamine diphosphate binding domain LNQ37_002830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNQ37_002830 PF00364 Biotin-requiring enzyme LNQ37_002830 PF02817 e3 binding domain LNQ37_002835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ37_002835 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_002845 PF00330 Aconitase family (aconitate hydratase) LNQ37_002845 PF06434 Aconitate hydratase 2 N-terminus LNQ37_002845 PF11791 Aconitate B N-terminal domain LNQ37_002850 PF06062 Uncharacterised protein family (UPF0231) LNQ37_002855 PF00892 EamA-like transporter family LNQ37_002860 PF02675 S-adenosylmethionine decarboxylase LNQ37_002865 PF17284 Spermidine synthase tetramerisation domain LNQ37_002870 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LNQ37_002875 PF07731 Multicopper oxidase LNQ37_002875 PF07732 Multicopper oxidase LNQ37_002875 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNQ37_002875 PF00394 Multicopper oxidase LNQ37_002880 PF00156 Phosphoribosyl transferase domain LNQ37_002885 PF00484 Carbonic anhydrase LNQ37_002890 PF00005 ABC transporter LNQ37_002895 PF01061 ABC-2 type transporter LNQ37_002900 PF01522 Polysaccharide deacetylase LNQ37_002905 PF02261 Aspartate decarboxylase LNQ37_002910 PF02569 Pantoate-beta-alanine ligase LNQ37_002915 PF02548 Ketopantoate hydroxymethyltransferase LNQ37_002920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LNQ37_002925 PF01743 Poly A polymerase head domain LNQ37_002925 PF12627 Probable RNA and SrmB- binding site of polymerase A LNQ37_002925 PF12626 Polymerase A arginine-rich C-terminus LNQ37_002930 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ37_002935 PF01258 Prokaryotic dksA/traR C4-type zinc finger LNQ37_002940 PF03749 Sugar fermentation stimulation protein RE domain LNQ37_002940 PF17746 SfsA N-terminal OB domain LNQ37_002945 PF02834 LigT like Phosphoesterase LNQ37_002950 PF00270 DEAD/DEAH box helicase LNQ37_002950 PF04408 Helicase associated domain (HA2) LNQ37_002950 PF00271 Helicase conserved C-terminal domain LNQ37_002950 PF08482 ATP-dependent helicase C-terminal LNQ37_002955 PF00905 Penicillin binding protein transpeptidase domain LNQ37_002955 PF14814 Bifunctional transglycosylase second domain LNQ37_002955 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LNQ37_002955 PF00912 Transglycosylase LNQ37_002960 PF00202 Aminotransferase class-III LNQ37_002965 PF00654 Voltage gated chloride channel LNQ37_002970 PF01521 Iron-sulphur cluster biosynthesis LNQ37_002975 PF03458 UPF0126 domain LNQ37_002980 PF01497 Periplasmic binding protein LNQ37_002985 PF01048 Phosphorylase superfamily LNQ37_002990 PF01966 HD domain LNQ37_002990 PF13286 Phosphohydrolase-associated domain LNQ37_002995 PF00595 PDZ domain LNQ37_003000 PF00672 HAMP domain LNQ37_003000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_003000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNQ37_003000 PF01627 Hpt domain LNQ37_003000 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_003000 PF00072 Response regulator receiver domain LNQ37_003005 PF01938 TRAM domain LNQ37_003005 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ37_003010 PF02824 TGS domain LNQ37_003010 PF04607 Region found in RelA / SpoT proteins LNQ37_003010 PF13291 ACT domain LNQ37_003015 PF03819 MazG nucleotide pyrophosphohydrolase domain LNQ37_003020 PF06418 CTP synthase N-terminus LNQ37_003020 PF00117 Glutamine amidotransferase class-I LNQ37_003025 PF00113 Enolase, C-terminal TIM barrel domain LNQ37_003025 PF03952 Enolase, N-terminal domain LNQ37_003030 PF04055 Radical SAM superfamily LNQ37_003035 PF01242 6-pyruvoyl tetrahydropterin synthase LNQ37_003040 PF00258 Flavodoxin LNQ37_003040 PF00175 Oxidoreductase NAD-binding domain LNQ37_003040 PF00667 FAD binding domain LNQ37_003045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LNQ37_003045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LNQ37_003050 PF01507 Phosphoadenosine phosphosulfate reductase family LNQ37_003065 PF04389 Peptidase family M28 LNQ37_003070 PF10414 Sirohaem synthase dimerisation region LNQ37_003070 PF14824 Sirohaem biosynthesis protein central LNQ37_003070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ37_003075 PF01507 Phosphoadenosine phosphosulfate reductase family LNQ37_003080 PF00009 Elongation factor Tu GTP binding domain LNQ37_003090 PF12084 Protein of unknown function (DUF3561) LNQ37_003095 PF04977 Septum formation initiator LNQ37_003100 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LNQ37_003105 PF02542 YgbB family LNQ37_003110 PF01142 tRNA pseudouridine synthase D (TruD) LNQ37_003115 PF01975 Survival protein SurE LNQ37_003125 PF01551 Peptidase family M23 LNQ37_003125 PF01476 LysM domain LNQ37_003130 PF04542 Sigma-70 region 2 LNQ37_003130 PF04539 Sigma-70 region 3 LNQ37_003130 PF00140 Sigma-70 factor, region 1.2 LNQ37_003130 PF04545 Sigma-70, region 4 LNQ37_003135 PF05192 MutS domain III LNQ37_003135 PF00488 MutS domain V LNQ37_003135 PF01624 MutS domain I LNQ37_003135 PF05190 MutS family domain IV LNQ37_003135 PF05188 MutS domain II LNQ37_003200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_003200 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_003200 PF09308 LuxQ, periplasmic LNQ37_003200 PF00072 Response regulator receiver domain LNQ37_003210 PF00196 Bacterial regulatory proteins, luxR family LNQ37_003210 PF00072 Response regulator receiver domain LNQ37_003225 PF01464 Transglycosylase SLT domain LNQ37_003245 PF01514 Secretory protein of YscJ/FliF family LNQ37_003265 PF12833 Helix-turn-helix domain LNQ37_003270 PF03958 Bacterial type II/III secretion system short domain LNQ37_003270 PF00263 Bacterial type II and III secretion system protein LNQ37_003275 PF07201 HrpJ-like domain LNQ37_003280 PF00771 FHIPEP family LNQ37_003290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ37_003290 PF18269 T3SS EscN ATPase C-terminal domain LNQ37_003290 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ37_003305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ37_003310 PF00813 FliP family LNQ37_003315 PF01313 Bacterial export proteins, family 3 LNQ37_003320 PF01311 Bacterial export proteins, family 1 LNQ37_003325 PF01312 FlhB HrpN YscU SpaS Family LNQ37_003330 PF07720 Tetratricopeptide repeat LNQ37_003355 PF00550 Phosphopantetheine attachment site LNQ37_003375 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ37_003375 PF18416 N-acetylglucosamine binding protein domain 2 LNQ37_003380 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LNQ37_003385 PF01478 Type IV leader peptidase family LNQ37_003385 PF06750 Bacterial Peptidase A24 N-terminal domain LNQ37_003395 PF05134 Type II secretion system (T2SS), protein L LNQ37_003395 PF12693 GspL periplasmic domain LNQ37_003400 PF03934 Type II secretion system (T2SS), protein K LNQ37_003405 PF07963 Prokaryotic N-terminal methylation motif LNQ37_003405 PF11612 Type II secretion system (T2SS), protein J LNQ37_003410 PF07963 Prokaryotic N-terminal methylation motif LNQ37_003410 PF02501 Type II secretion system (T2SS), protein I LNQ37_003415 PF07963 Prokaryotic N-terminal methylation motif LNQ37_003415 PF12019 Type II transport protein GspH LNQ37_003420 PF07963 Prokaryotic N-terminal methylation motif LNQ37_003420 PF08334 Type II secretion system (T2SS), protein G LNQ37_003425 PF00482 Type II secretion system (T2SS), protein F LNQ37_003430 PF00437 Type II/IV secretion system protein LNQ37_003435 PF03958 Bacterial type II/III secretion system short domain LNQ37_003435 PF00263 Bacterial type II and III secretion system protein LNQ37_003440 PF11356 Type II secretion system protein C LNQ37_003465 PF05683 Fumarase C-terminus LNQ37_003465 PF05681 Fumarate hydratase (Fumerase) LNQ37_003470 PF07690 Major Facilitator Superfamily LNQ37_003475 PF02464 Competence-damaged protein LNQ37_003480 PF00154 recA bacterial DNA recombination protein LNQ37_003485 PF02631 RecX family LNQ37_003490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNQ37_003490 PF02272 DHHA1 domain LNQ37_003490 PF01411 tRNA synthetases class II (A) LNQ37_003495 PF02599 Global regulator protein family LNQ37_003520 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_003525 PF09335 SNARE associated Golgi protein LNQ37_003530 PF04262 Glutamate-cysteine ligase LNQ37_003535 PF02664 S-Ribosylhomocysteinase (LuxS) LNQ37_003540 PF00571 CBS domain LNQ37_003540 PF03471 Transporter associated domain LNQ37_003540 PF01595 Cyclin M transmembrane N-terminal domain LNQ37_003545 PF01578 Cytochrome C assembly protein LNQ37_003550 PF00448 SRP54-type protein, GTPase domain LNQ37_003550 PF02978 Signal peptide binding domain LNQ37_003550 PF02881 SRP54-type protein, helical bundle domain LNQ37_003555 PF00886 Ribosomal protein S16 LNQ37_003560 PF01782 RimM N-terminal domain LNQ37_003560 PF05239 PRC-barrel domain LNQ37_003565 PF01746 tRNA (Guanine-1)-methyltransferase LNQ37_003570 PF01245 Ribosomal protein L19 LNQ37_003575 PF04338 Protein of unknown function, DUF481 LNQ37_003580 PF03605 Anaerobic c4-dicarboxylate membrane transporter LNQ37_003585 PF04397 LytTr DNA-binding domain LNQ37_003585 PF00072 Response regulator receiver domain LNQ37_003590 PF00793 DAHP synthetase I family LNQ37_003595 PF02153 Prephenate dehydrogenase LNQ37_003595 PF01817 Chorismate mutase type II LNQ37_003600 PF01817 Chorismate mutase type II LNQ37_003600 PF00800 Prephenate dehydratase LNQ37_003610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LNQ37_003615 PF13525 Outer membrane lipoprotein LNQ37_003620 PF01479 S4 domain LNQ37_003620 PF00849 RNA pseudouridylate synthase LNQ37_003625 PF02578 Multi-copper polyphenol oxidoreductase laccase LNQ37_003630 PF17871 AAA lid domain LNQ37_003630 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_003630 PF02861 Clp amino terminal domain, pathogenicity island component LNQ37_003630 PF07724 AAA domain (Cdc48 subfamily) LNQ37_003630 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ37_003665 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ37_003670 PF01476 LysM domain LNQ37_003670 PF01464 Transglycosylase SLT domain LNQ37_003675 PF16123 Hydroxyacylglutathione hydrolase C-terminus LNQ37_003675 PF00753 Metallo-beta-lactamase superfamily LNQ37_003680 PF08241 Methyltransferase domain LNQ37_003685 PF00075 RNase H LNQ37_003690 PF00929 Exonuclease LNQ37_003700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNQ37_003700 PF09317 Domain of unknown function (DUF1974) LNQ37_003700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNQ37_003705 PF13580 SIS domain LNQ37_003710 PF13230 Glutamine amidotransferases class-II LNQ37_003715 PF03734 L,D-transpeptidase catalytic domain LNQ37_003720 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LNQ37_003720 PF11973 NQRA C-terminal domain LNQ37_003725 PF03116 NQR2, RnfD, RnfE family LNQ37_003730 PF04205 FMN-binding domain LNQ37_003735 PF02508 Rnf-Nqr subunit, membrane protein LNQ37_003740 PF02508 Rnf-Nqr subunit, membrane protein LNQ37_003745 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ37_003745 PF00175 Oxidoreductase NAD-binding domain LNQ37_003745 PF00970 Oxidoreductase FAD-binding domain LNQ37_003750 PF02424 ApbE family LNQ37_003755 PF04400 (Na+)-NQR maturation NqrM LNQ37_003760 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ37_003765 PF11798 IMS family HHH motif LNQ37_003765 PF11799 impB/mucB/samB family C-terminal domain LNQ37_003765 PF00817 impB/mucB/samB family LNQ37_003770 PF01546 Peptidase family M20/M25/M40 LNQ37_003770 PF07687 Peptidase dimerisation domain LNQ37_003775 PF00156 Phosphoribosyl transferase domain LNQ37_003780 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LNQ37_003785 PF07417 Sigma factor-binding transcriptional regulator Crl LNQ37_003790 PF01472 PUA domain LNQ37_003790 PF00696 Amino acid kinase family LNQ37_003795 PF00171 Aldehyde dehydrogenase family LNQ37_003800 PF07238 PilZ domain LNQ37_003800 PF07317 Flagellar regulator YcgR LNQ37_003825 PF07715 TonB-dependent Receptor Plug Domain LNQ37_003825 PF00593 TonB dependent receptor LNQ37_003830 PF01202 Shikimate kinase LNQ37_003850 PF07302 AroM protein LNQ37_003855 PF06865 Pyrimidine/purine nucleoside phosphorylase LNQ37_003860 PF04381 Putative exonuclease, RdgC LNQ37_003865 PF00480 ROK family LNQ37_003870 PF13476 AAA domain LNQ37_003875 PF00149 Calcineurin-like phosphoesterase LNQ37_003875 PF12320 Type 5 capsule protein repressor C-terminal domain LNQ37_003880 PF00072 Response regulator receiver domain LNQ37_003880 PF00486 Transcriptional regulatory protein, C terminal LNQ37_003885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_003885 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_003885 PF00989 PAS fold LNQ37_003885 PF11808 Phosphate regulon sensor protein PhoR LNQ37_003890 PF12849 PBP superfamily domain LNQ37_003895 PF05525 Branched-chain amino acid transport protein LNQ37_003900 PF00324 Amino acid permease LNQ37_003905 PF02903 Alpha amylase, N-terminal ig-like domain LNQ37_003905 PF00128 Alpha amylase, catalytic domain LNQ37_003915 PF10417 C-terminal domain of 1-Cys peroxiredoxin LNQ37_003915 PF00578 AhpC/TSA family LNQ37_003920 PF04336 Acyl carrier protein phosphodiesterase LNQ37_003925 PF02547 Queuosine biosynthesis protein LNQ37_003930 PF01702 Queuine tRNA-ribosyltransferase LNQ37_003935 PF02699 Preprotein translocase subunit LNQ37_003940 PF02355 Protein export membrane protein LNQ37_003940 PF13721 SecD export protein N-terminal TM region LNQ37_003940 PF07549 SecD/SecF GG Motif LNQ37_003945 PF07549 SecD/SecF GG Motif LNQ37_003945 PF02355 Protein export membrane protein LNQ37_003950 PF03477 ATP cone domain LNQ37_003955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ37_003955 PF01872 RibD C-terminal domain LNQ37_003960 PF00885 6,7-dimethyl-8-ribityllumazine synthase LNQ37_003965 PF01029 NusB family LNQ37_003970 PF00586 AIR synthase related protein, N-terminal domain LNQ37_003970 PF02769 AIR synthase related protein, C-terminal domain LNQ37_003975 PF04608 Phosphatidylglycerophosphatase A LNQ37_003980 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LNQ37_003980 PF02779 Transketolase, pyrimidine binding domain LNQ37_003980 PF02780 Transketolase, C-terminal domain LNQ37_003985 PF00348 Polyprenyl synthetase LNQ37_003990 PF02609 Exonuclease VII small subunit LNQ37_003995 PF02926 THUMP domain LNQ37_003995 PF02568 Thiamine biosynthesis protein (ThiI) LNQ37_004000 PF14532 Sigma-54 interaction domain LNQ37_004000 PF00072 Response regulator receiver domain LNQ37_004000 PF02954 Bacterial regulatory protein, Fis family LNQ37_004005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_004005 PF00672 HAMP domain LNQ37_004005 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_004015 PF07690 Major Facilitator Superfamily LNQ37_004020 PF01965 DJ-1/PfpI family LNQ37_004025 PF02558 Ketopantoate reductase PanE/ApbA LNQ37_004025 PF08546 Ketopantoate reductase PanE/ApbA C terminal LNQ37_004030 PF04461 Protein of unknown function (DUF520) LNQ37_004035 PF07690 Major Facilitator Superfamily LNQ37_004040 PF01040 UbiA prenyltransferase family LNQ37_004045 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LNQ37_004050 PF00510 Cytochrome c oxidase subunit III LNQ37_004055 PF00115 Cytochrome C and Quinol oxidase polypeptide I LNQ37_004060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LNQ37_004060 PF06481 COX Aromatic Rich Motif LNQ37_004065 PF03502 Nucleoside-specific channel-forming protein, Tsx LNQ37_004070 PF07690 Major Facilitator Superfamily LNQ37_004075 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LNQ37_004075 PF03923 Uncharacterized lipoprotein LNQ37_004080 PF01722 BolA-like protein LNQ37_004085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNQ37_004085 PF05698 Bacterial trigger factor protein (TF) C-terminus LNQ37_004085 PF05697 Bacterial trigger factor protein (TF) LNQ37_004090 PF00574 Clp protease LNQ37_004095 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ37_004095 PF07724 AAA domain (Cdc48 subfamily) LNQ37_004095 PF06689 ClpX C4-type zinc finger LNQ37_004100 PF02190 ATP-dependent protease La (LON) substrate-binding domain LNQ37_004100 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_004100 PF05362 Lon protease (S16) C-terminal proteolytic domain LNQ37_004105 PF00216 Bacterial DNA-binding protein LNQ37_004110 PF13145 PPIC-type PPIASE domain LNQ37_004125 PF06508 Queuosine biosynthesis protein QueC LNQ37_004130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_004130 PF12793 Sugar transport-related sRNA regulator N-term LNQ37_004145 PF01037 Lrp/AsnC ligand binding domain LNQ37_004145 PF13404 AsnC-type helix-turn-helix domain LNQ37_004150 PF00005 ABC transporter LNQ37_004150 PF00664 ABC transporter transmembrane region LNQ37_004155 PF00664 ABC transporter transmembrane region LNQ37_004155 PF00005 ABC transporter LNQ37_004160 PF00543 Nitrogen regulatory protein P-II LNQ37_004165 PF00909 Ammonium Transporter Family LNQ37_004175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNQ37_004185 PF05321 Haemolysin expression modulating protein LNQ37_004190 PF10757 Biofilm formation regulator YbaJ LNQ37_004200 PF00444 Ribosomal protein L36 LNQ37_004205 PF01197 Ribosomal protein L31 LNQ37_004210 PF00873 AcrB/AcrD/AcrF family LNQ37_004215 PF00529 HlyD membrane-fusion protein of T1SS LNQ37_004215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ37_004220 PF08361 MAATS-type transcriptional repressor, C-terminal region LNQ37_004220 PF00440 Bacterial regulatory proteins, tetR family LNQ37_004225 PF02635 DsrE/DsrF-like family LNQ37_004230 PF00924 Mechanosensitive ion channel LNQ37_004230 PF12795 Mechanosensitive ion channel porin domain LNQ37_004230 PF12794 Mechanosensitive ion channel inner membrane domain 1 LNQ37_004235 PF10689 Protein of unknown function (DUF2496) LNQ37_004245 PF04304 Protein of unknown function (DUF454) LNQ37_004250 PF00156 Phosphoribosyl transferase domain LNQ37_004255 PF01970 Tripartite tricarboxylate transporter TctA family LNQ37_004270 PF00072 Response regulator receiver domain LNQ37_004270 PF00486 Transcriptional regulatory protein, C terminal LNQ37_004275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_004275 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_004280 PF12170 DNA polymerase III tau subunit V interacting with alpha LNQ37_004280 PF12169 DNA polymerase III subunits gamma and tau domain III LNQ37_004280 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LNQ37_004285 PF02575 YbaB/EbfC DNA-binding family LNQ37_004290 PF13662 Toprim domain LNQ37_004290 PF02132 RecR protein LNQ37_004295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_004295 PF00183 Hsp90 protein LNQ37_004300 PF05191 Adenylate kinase, active site lid LNQ37_004305 PF00762 Ferrochelatase LNQ37_004310 PF02706 Chain length determinant protein LNQ37_004315 PF00294 pfkB family carbohydrate kinase LNQ37_004320 PF00999 Sodium/hydrogen exchanger family LNQ37_004320 PF02254 TrkA-N domain LNQ37_004325 PF02872 5'-nucleotidase, C-terminal domain LNQ37_004325 PF00149 Calcineurin-like phosphoesterase LNQ37_004340 PF08242 Methyltransferase domain LNQ37_004360 PF02350 UDP-N-acetylglucosamine 2-epimerase LNQ37_004370 PF08485 Polysaccharide biosynthesis protein C-terminal LNQ37_004370 PF02719 Polysaccharide biosynthesis protein LNQ37_004380 PF04073 Aminoacyl-tRNA editing domain LNQ37_004385 PF01963 TraB family LNQ37_004390 PF00403 Heavy-metal-associated domain LNQ37_004395 PF13411 MerR HTH family regulatory protein LNQ37_004400 PF01957 NfeD-like C-terminal, partner-binding LNQ37_004405 PF01145 SPFH domain / Band 7 family LNQ37_004405 PF16200 C-terminal region of band_7 LNQ37_004410 PF00085 Thioredoxin LNQ37_004415 PF00106 short chain dehydrogenase LNQ37_004420 PF13472 GDSL-like Lipase/Acylhydrolase family LNQ37_004425 PF00005 ABC transporter LNQ37_004435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LNQ37_004435 PF02222 ATP-grasp domain LNQ37_004440 PF00731 AIR carboxylase LNQ37_004445 PF00149 Calcineurin-like phosphoesterase LNQ37_004450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNQ37_004455 PF09190 DALR domain LNQ37_004455 PF01406 tRNA synthetases class I (C) catalytic domain LNQ37_004470 PF00419 Fimbrial protein LNQ37_004475 PF00577 Outer membrane usher protein LNQ37_004475 PF13953 PapC C-terminal domain LNQ37_004475 PF13954 PapC N-terminal domain LNQ37_004480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_004480 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_004515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LNQ37_004515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LNQ37_004525 PF01022 Bacterial regulatory protein, arsR family LNQ37_004530 PF02040 Arsenical pump membrane protein LNQ37_004535 PF03960 ArsC family LNQ37_004545 PF00501 AMP-binding enzyme LNQ37_004570 PF01292 Prokaryotic cytochrome b561 LNQ37_004580 PF00343 Carbohydrate phosphorylase LNQ37_004590 PF00072 Response regulator receiver domain LNQ37_004590 PF00486 Transcriptional regulatory protein, C terminal LNQ37_004600 PF00483 Nucleotidyl transferase LNQ37_004610 PF03552 Cellulose synthase LNQ37_004610 PF00535 Glycosyl transferase family 2 LNQ37_004610 PF07238 PilZ domain LNQ37_004630 PF16355 Domain of unknown function (DUF4982) LNQ37_004630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LNQ37_004630 PF02837 Glycosyl hydrolases family 2, sugar binding domain LNQ37_004630 PF00703 Glycosyl hydrolases family 2 LNQ37_004635 PF00072 Response regulator receiver domain LNQ37_004635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNQ37_004635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_004635 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_004635 PF01627 Hpt domain LNQ37_004635 PF00672 HAMP domain LNQ37_004640 PF00072 Response regulator receiver domain LNQ37_004640 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_004645 PF00440 Bacterial regulatory proteins, tetR family LNQ37_004675 PF00196 Bacterial regulatory proteins, luxR family LNQ37_004680 PF00313 'Cold-shock' DNA-binding domain LNQ37_004685 PF00313 'Cold-shock' DNA-binding domain LNQ37_004690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LNQ37_004700 PF05230 MASE2 domain LNQ37_004700 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_004705 PF02416 mttA/Hcf106 family LNQ37_004710 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LNQ37_004710 PF04055 Radical SAM superfamily LNQ37_004715 PF03099 Biotin/lipoate A/B protein ligase family LNQ37_004720 PF04359 Protein of unknown function (DUF493) LNQ37_004725 PF07943 Penicillin-binding protein 5, C-terminal domain LNQ37_004725 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ37_004730 PF03330 Lytic transglycolase LNQ37_004730 PF05036 Sporulation related domain LNQ37_004735 PF01098 Cell cycle protein LNQ37_004740 PF03717 Penicillin-binding Protein dimerisation domain LNQ37_004740 PF00905 Penicillin binding protein transpeptidase domain LNQ37_004745 PF02590 Predicted SPOUT methyltransferase LNQ37_004755 PF01467 Cytidylyltransferase-like LNQ37_004760 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LNQ37_004760 PF06144 DNA polymerase III, delta subunit LNQ37_004765 PF04390 Lipopolysaccharide-assembly LNQ37_004770 PF13603 Leucyl-tRNA synthetase, Domain 2 LNQ37_004770 PF08264 Anticodon-binding domain of tRNA LNQ37_004770 PF00133 tRNA synthetases class I (I, L, M and V) LNQ37_004775 PF07295 Zinc-ribbon containing domain LNQ37_004780 PF00005 ABC transporter LNQ37_004785 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_004790 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_004795 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_004800 PF00795 Carbon-nitrogen hydrolase LNQ37_004805 PF03471 Transporter associated domain LNQ37_004805 PF00571 CBS domain LNQ37_004810 PF02130 Uncharacterized protein family UPF0054 LNQ37_004815 PF02562 PhoH-like protein LNQ37_004820 PF00919 Uncharacterized protein family UPF0004 LNQ37_004820 PF01938 TRAM domain LNQ37_004820 PF04055 Radical SAM superfamily LNQ37_004825 PF01494 FAD binding domain LNQ37_004860 PF13537 Glutamine amidotransferase domain LNQ37_004860 PF00733 Asparagine synthase LNQ37_004865 PF13344 Haloacid dehalogenase-like hydrolase LNQ37_004870 PF01047 MarR family LNQ37_004870 PF00480 ROK family LNQ37_004875 PF01979 Amidohydrolase family LNQ37_004880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LNQ37_004885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LNQ37_004885 PF00367 phosphotransferase system, EIIB LNQ37_004885 PF02378 Phosphotransferase system, EIIC LNQ37_004890 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ37_004890 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LNQ37_004895 PF03573 outer membrane porin, OprD family LNQ37_004900 PF13982 YbfN-like lipoprotein LNQ37_004905 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LNQ37_004905 PF03173 Putative carbohydrate binding domain LNQ37_004905 PF02838 Glycosyl hydrolase family 20, domain 2 LNQ37_004905 PF00728 Glycosyl hydrolase family 20, catalytic domain LNQ37_004910 PF01475 Ferric uptake regulator family LNQ37_004915 PF00258 Flavodoxin LNQ37_004920 PF00672 HAMP domain LNQ37_004920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_004920 PF02203 Tar ligand binding domain homologue LNQ37_004925 PF01402 Ribbon-helix-helix protein, copG family LNQ37_004930 PF12697 Alpha/beta hydrolase family LNQ37_004935 PF17206 SeqA protein N-terminal domain LNQ37_004935 PF03925 SeqA protein C-terminal domain LNQ37_004940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNQ37_004940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNQ37_004940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNQ37_004940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNQ37_004950 PF00072 Response regulator receiver domain LNQ37_004950 PF00486 Transcriptional regulatory protein, C terminal LNQ37_004955 PF13493 Domain of unknown function (DUF4118) LNQ37_004955 PF13492 GAF domain LNQ37_004955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_004955 PF02702 Osmosensitive K+ channel His kinase sensor domain LNQ37_004955 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_004960 PF02669 K+-transporting ATPase, c chain LNQ37_004970 PF03814 Potassium-transporting ATPase A subunit LNQ37_004975 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) LNQ37_004980 PF10725 Protein of unknown function (DUF2517) LNQ37_004985 PF08349 Protein of unknown function (DUF1722) LNQ37_004990 PF03441 FAD binding domain of DNA photolyase LNQ37_004990 PF00875 DNA photolyase LNQ37_004995 PF02112 cAMP phosphodiesterases class-II LNQ37_005000 PF01784 NIF3 (NGG1p interacting factor 3) LNQ37_005005 PF02682 Carboxyltransferase domain, subdomain C and D LNQ37_005010 PF02626 Carboxyltransferase domain, subdomain A and B LNQ37_005015 PF03746 LamB/YcsF family LNQ37_005030 PF01470 Pyroglutamyl peptidase LNQ37_005040 PF00285 Citrate synthase, C-terminal domain LNQ37_005045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNQ37_005050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNQ37_005055 PF02910 Fumarate reductase flavoprotein C-term LNQ37_005055 PF00890 FAD binding domain LNQ37_005060 PF13085 2Fe-2S iron-sulfur cluster binding domain LNQ37_005065 PF02779 Transketolase, pyrimidine binding domain LNQ37_005065 PF00676 Dehydrogenase E1 component LNQ37_005065 PF16870 2-oxoglutarate dehydrogenase C-terminal LNQ37_005065 PF16078 2-oxoglutarate dehydrogenase N-terminus LNQ37_005070 PF02817 e3 binding domain LNQ37_005070 PF00364 Biotin-requiring enzyme LNQ37_005070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNQ37_005075 PF08442 ATP-grasp domain LNQ37_005075 PF00549 CoA-ligase LNQ37_005080 PF02629 CoA binding domain LNQ37_005080 PF00549 CoA-ligase LNQ37_005085 PF02872 5'-nucleotidase, C-terminal domain LNQ37_005085 PF00149 Calcineurin-like phosphoesterase LNQ37_005090 PF01654 Cytochrome bd terminal oxidase subunit I LNQ37_005095 PF02322 Cytochrome bd terminal oxidase subunit II LNQ37_005100 PF08173 Membrane bound YbgT-like protein LNQ37_005105 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LNQ37_005110 PF03061 Thioesterase superfamily LNQ37_005115 PF01618 MotA/TolQ/ExbB proton channel family LNQ37_005120 PF02472 Biopolymer transport protein ExbD/TolR LNQ37_005125 PF06519 TolA C-terminal LNQ37_005125 PF06519 TolA C-terminal LNQ37_005130 PF04052 TolB amino-terminal domain LNQ37_005130 PF07676 WD40-like Beta Propeller Repeat LNQ37_005135 PF00691 OmpA family LNQ37_005140 PF16331 TolA binding protein trimerisation LNQ37_005140 PF13174 Tetratricopeptide repeat LNQ37_005170 PF02445 Quinolinate synthetase A protein LNQ37_005175 PF04973 Nicotinamide mononucleotide transporter LNQ37_005180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_005180 PF01627 Hpt domain LNQ37_005180 PF00989 PAS fold LNQ37_005180 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_005180 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_005180 PF00072 Response regulator receiver domain LNQ37_005185 PF00196 Bacterial regulatory proteins, luxR family LNQ37_005185 PF00072 Response regulator receiver domain LNQ37_005190 PF00793 DAHP synthetase I family LNQ37_005195 PF00300 Histidine phosphatase superfamily (branch 1) LNQ37_005205 PF01263 Aldose 1-epimerase LNQ37_005210 PF10509 Galactokinase galactose-binding signature LNQ37_005210 PF08544 GHMP kinases C terminal LNQ37_005210 PF00288 GHMP kinases N terminal domain LNQ37_005215 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LNQ37_005215 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LNQ37_005220 PF16363 GDP-mannose 4,6 dehydratase LNQ37_005235 PF03459 TOBE domain LNQ37_005235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_005240 PF10766 Multidrug efflux pump-associated protein AcrZ LNQ37_005250 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005255 PF00005 ABC transporter LNQ37_005255 PF03459 TOBE domain LNQ37_005265 PF10282 Lactonase, 7-bladed beta-propeller LNQ37_005270 PF00202 Aminotransferase class-III LNQ37_005275 PF06968 Biotin and Thiamin Synthesis associated domain LNQ37_005275 PF04055 Radical SAM superfamily LNQ37_005280 PF00155 Aminotransferase class I and II LNQ37_005285 PF08241 Methyltransferase domain LNQ37_005295 PF00005 ABC transporter LNQ37_005300 PF17757 UvrB interaction domain LNQ37_005300 PF04851 Type III restriction enzyme, res subunit LNQ37_005300 PF02151 UvrB/uvrC motif LNQ37_005300 PF12344 Ultra-violet resistance protein B LNQ37_005300 PF00271 Helicase conserved C-terminal domain LNQ37_005305 PF09905 DNA-binding protein VF530 LNQ37_005320 PF01032 FecCD transport family LNQ37_005325 PF00005 ABC transporter LNQ37_005330 PF01933 Uncharacterised protein family UPF0052 LNQ37_005335 PF04055 Radical SAM superfamily LNQ37_005335 PF06463 Molybdenum Cofactor Synthesis C LNQ37_005340 PF01967 MoaC family LNQ37_005345 PF02597 ThiS family LNQ37_005350 PF02391 MoaE protein LNQ37_005355 PF01027 Inhibitor of apoptosis-promoting Bax1 LNQ37_005370 PF00005 ABC transporter LNQ37_005375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ37_005380 PF09209 Tetracyclin repressor-like, C-terminal domain LNQ37_005380 PF00440 Bacterial regulatory proteins, tetR family LNQ37_005385 PF00270 DEAD/DEAH box helicase LNQ37_005385 PF00271 Helicase conserved C-terminal domain LNQ37_005390 PF01207 Dihydrouridine synthase (Dus) LNQ37_005400 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ37_005405 PF09330 D-lactate dehydrogenase, membrane binding LNQ37_005405 PF01565 FAD binding domain LNQ37_005410 PF01928 CYTH domain LNQ37_005415 PF01844 HNH endonuclease LNQ37_005425 PF04226 Transglycosylase associated protein LNQ37_005430 PF00005 ABC transporter LNQ37_005440 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005445 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005450 PF07308 Protein of unknown function (DUF1456) LNQ37_005455 PF00581 Rhodanese-like domain LNQ37_005460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LNQ37_005465 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005470 PF00005 ABC transporter LNQ37_005475 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005480 PF13520 Amino acid permease LNQ37_005485 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ37_005485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ37_005485 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ37_005495 PF00892 EamA-like transporter family LNQ37_005500 PF00267 Gram-negative porin LNQ37_005505 PF06733 DEAD_2 LNQ37_005505 PF13307 Helicase C-terminal domain LNQ37_005510 PF02885 Glycosyl transferase family, helical bundle domain LNQ37_005515 PF05971 RNA methyltransferase LNQ37_005520 PF00005 ABC transporter LNQ37_005525 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005530 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_005535 PF00210 Ferritin-like domain LNQ37_005540 PF13649 Methyltransferase domain LNQ37_005545 PF00892 EamA-like transporter family LNQ37_005550 PF13505 Outer membrane protein beta-barrel domain LNQ37_005555 PF00571 CBS domain LNQ37_005555 PF01769 Divalent cation transporter LNQ37_005555 PF03448 MgtE intracellular N domain LNQ37_005560 PF16916 Dimerisation domain of Zinc Transporter LNQ37_005560 PF01545 Cation efflux family LNQ37_005565 PF00005 ABC transporter LNQ37_005565 PF12848 ABC transporter LNQ37_005570 PF00899 ThiF family LNQ37_005575 PF00994 Probable molybdopterin binding domain LNQ37_005575 PF03454 MoeA C-terminal region (domain IV) LNQ37_005575 PF03453 MoeA N-terminal region (domain I and II) LNQ37_005585 PF00756 Putative esterase LNQ37_005590 PF08240 Alcohol dehydrogenase GroES-like domain LNQ37_005590 PF00107 Zinc-binding dehydrogenase LNQ37_005595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_005595 PF03466 LysR substrate binding domain LNQ37_005600 PF06779 Uncharacterised MFS-type transporter YbfB LNQ37_005605 PF01227 GTP cyclohydrolase I LNQ37_005610 PF04235 Protein of unknown function (DUF418) LNQ37_005615 PF00356 Bacterial regulatory proteins, lacI family LNQ37_005620 PF13407 Periplasmic binding protein domain LNQ37_005625 PF00005 ABC transporter LNQ37_005630 PF02653 Branched-chain amino acid transport system / permease component LNQ37_005635 PF02698 DUF218 domain LNQ37_005640 PF03949 Malic enzyme, NAD binding domain LNQ37_005640 PF00390 Malic enzyme, N-terminal domain LNQ37_005650 PF03466 LysR substrate binding domain LNQ37_005650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_005655 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ37_005655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LNQ37_005660 PF04172 LrgB-like family LNQ37_005665 PF03788 LrgA family LNQ37_005675 PF09334 tRNA synthetases class I (M) LNQ37_005675 PF01588 Putative tRNA binding domain LNQ37_005680 PF10609 NUBPL iron-transfer P-loop NTPase LNQ37_005685 PF00485 Phosphoribulokinase / Uridine kinase family LNQ37_005690 PF00692 dUTPase LNQ37_005695 PF05170 AsmA family LNQ37_005700 PF03606 C4-dicarboxylate anaerobic carrier LNQ37_005705 PF03471 Transporter associated domain LNQ37_005705 PF03741 Integral membrane protein TerC family LNQ37_005705 PF00571 CBS domain LNQ37_005710 PF00483 Nucleotidyl transferase LNQ37_005715 PF00483 Nucleotidyl transferase LNQ37_005720 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LNQ37_005720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LNQ37_005730 PF01502 Phosphoribosyl-AMP cyclohydrolase LNQ37_005730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LNQ37_005735 PF00977 Histidine biosynthesis protein LNQ37_005740 PF00977 Histidine biosynthesis protein LNQ37_005745 PF00117 Glutamine amidotransferase class-I LNQ37_005750 PF00475 Imidazoleglycerol-phosphate dehydratase LNQ37_005755 PF00155 Aminotransferase class I and II LNQ37_005760 PF00815 Histidinol dehydrogenase LNQ37_005765 PF01634 ATP phosphoribosyltransferase LNQ37_005765 PF08029 HisG, C-terminal domain LNQ37_005775 PF01370 NAD dependent epimerase/dehydratase family LNQ37_005780 PF00043 Glutathione S-transferase, C-terminal domain LNQ37_005780 PF13417 Glutathione S-transferase, N-terminal domain LNQ37_005795 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ37_005800 PF00571 CBS domain LNQ37_005800 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_005805 PF07943 Penicillin-binding protein 5, C-terminal domain LNQ37_005805 PF00768 D-alanyl-D-alanine carboxypeptidase LNQ37_005810 PF03313 Serine dehydratase alpha chain LNQ37_005810 PF03315 Serine dehydratase beta chain LNQ37_005820 PF00455 DeoR C terminal sensor domain LNQ37_005820 PF08220 DeoR-like helix-turn-helix domain LNQ37_005825 PF01791 DeoC/LacD family aldolase LNQ37_005830 PF01569 PAP2 superfamily LNQ37_005840 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_005840 PF00589 Phage integrase family LNQ37_005860 PF07022 Bacteriophage CI repressor helix-turn-helix domain LNQ37_005860 PF16452 Bacteriophage CI repressor C-terminal domain LNQ37_005870 PF06892 Phage regulatory protein CII (CP76) LNQ37_005895 PF06826 Predicted Permease Membrane Region LNQ37_005895 PF02080 TrkA-C domain LNQ37_005900 PF00462 Glutaredoxin LNQ37_005905 PF07214 Protein of unknown function (DUF1418) LNQ37_005910 PF10722 Putative bacterial sensory transduction regulator LNQ37_005915 PF13416 Bacterial extracellular solute-binding protein LNQ37_005920 PF00005 ABC transporter LNQ37_005920 PF08402 TOBE domain LNQ37_005925 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005930 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005935 PF10767 Protein of unknown function (DUF2593) LNQ37_005940 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ37_005945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_005950 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005955 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_005960 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_005965 PF00005 ABC transporter LNQ37_005970 PF12883 Protein of unknown function (DUF3828) LNQ37_005975 PF01906 Putative heavy-metal-binding LNQ37_005980 PF01370 NAD dependent epimerase/dehydratase family LNQ37_005985 PF11066 Protein of unknown function (DUF2867) LNQ37_005985 PF13460 NAD(P)H-binding LNQ37_005990 PF01212 Beta-eliminating lyase LNQ37_005995 PF00970 Oxidoreductase FAD-binding domain LNQ37_005995 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ37_005995 PF00175 Oxidoreductase NAD-binding domain LNQ37_006000 PF03063 Prismane/CO dehydrogenase family LNQ37_006005 PF03956 Lysine exporter LysO LNQ37_006010 PF11398 Protein of unknown function (DUF2813) LNQ37_006015 PF04393 Protein of unknown function (DUF535) LNQ37_006020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ37_006025 PF00005 ABC transporter LNQ37_006025 PF12704 MacB-like periplasmic core domain LNQ37_006025 PF02687 FtsX-like permease family LNQ37_006030 PF00313 'Cold-shock' DNA-binding domain LNQ37_006035 PF02617 ATP-dependent Clp protease adaptor protein ClpS LNQ37_006040 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_006040 PF07724 AAA domain (Cdc48 subfamily) LNQ37_006040 PF17871 AAA lid domain LNQ37_006040 PF02861 Clp amino terminal domain, pathogenicity island component LNQ37_006040 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ37_006045 PF01176 Translation initiation factor 1A / IF-1 LNQ37_006050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LNQ37_006055 PF00664 ABC transporter transmembrane region LNQ37_006055 PF00005 ABC transporter LNQ37_006060 PF00005 ABC transporter LNQ37_006060 PF00664 ABC transporter transmembrane region LNQ37_006065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_006070 PF01037 Lrp/AsnC ligand binding domain LNQ37_006075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LNQ37_006075 PF17854 FtsK alpha domain LNQ37_006075 PF09397 Ftsk gamma domain LNQ37_006075 PF01580 FtsK/SpoIIIE family LNQ37_006080 PF03548 Outer membrane lipoprotein carrier protein LolA LNQ37_006085 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_006085 PF16193 AAA C-terminal domain LNQ37_006085 PF12002 MgsA AAA+ ATPase C terminal LNQ37_006090 PF02403 Seryl-tRNA synthetase N-terminal domain LNQ37_006090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ37_006095 PF07690 Major Facilitator Superfamily LNQ37_006100 PF04055 Radical SAM superfamily LNQ37_006105 PF01228 Glycine radical LNQ37_006105 PF02901 Pyruvate formate lyase-like LNQ37_006110 PF01226 Formate/nitrite transporter LNQ37_006115 PF18381 YcaO cyclodehydratase C-terminal domain LNQ37_006115 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LNQ37_006120 PF00710 Asparaginase, N-terminal LNQ37_006120 PF17763 Glutaminase/Asparaginase C-terminal domain LNQ37_006125 PF00266 Aminotransferase class-V LNQ37_006130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNQ37_006135 PF02224 Cytidylate kinase LNQ37_006140 PF00575 S1 RNA binding domain LNQ37_006145 PF00216 Bacterial DNA-binding protein LNQ37_006150 PF03772 Competence protein LNQ37_006150 PF00753 Metallo-beta-lactamase superfamily LNQ37_006155 PF00664 ABC transporter transmembrane region LNQ37_006155 PF00005 ABC transporter LNQ37_006160 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LNQ37_006165 PF07063 Domain of unknown function (DUF1338) LNQ37_006170 PF00313 'Cold-shock' DNA-binding domain LNQ37_006175 PF00313 'Cold-shock' DNA-binding domain LNQ37_006180 PF03966 Trm112p-like protein LNQ37_006185 PF02348 Cytidylyltransferase LNQ37_006190 PF01636 Phosphotransferase enzyme family LNQ37_006195 PF02698 DUF218 domain LNQ37_006200 PF13847 Methyltransferase domain LNQ37_006205 PF03882 MukF winged-helix domain LNQ37_006205 PF17193 MukF C-terminal domain LNQ37_006205 PF17192 MukF middle domain LNQ37_006210 PF04288 MukE-like family LNQ37_006215 PF04310 MukB N-terminal LNQ37_006215 PF16330 MukB hinge domain LNQ37_006220 PF01471 Putative peptidoglycan binding domain LNQ37_006220 PF03734 L,D-transpeptidase catalytic domain LNQ37_006225 PF05951 Bacterial protein of unknown function (DUF882) LNQ37_006230 PF00753 Metallo-beta-lactamase superfamily LNQ37_006235 PF00155 Aminotransferase class I and II LNQ37_006240 PF00267 Gram-negative porin LNQ37_006245 PF00152 tRNA synthetases class II (D, K and N) LNQ37_006245 PF01336 OB-fold nucleic acid binding domain LNQ37_006250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LNQ37_006250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LNQ37_006255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LNQ37_006255 PF01433 Peptidase family M1 domain LNQ37_006255 PF11940 Domain of unknown function (DUF3458) Ig-like fold LNQ37_006260 PF01180 Dihydroorotate dehydrogenase LNQ37_006265 PF07126 Cell-division protein ZapC LNQ37_006270 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ37_006270 PF03473 MOSC domain LNQ37_006270 PF03476 MOSC N-terminal beta barrel domain LNQ37_006275 PF10672 S-adenosylmethionine-dependent methyltransferase LNQ37_006275 PF02926 THUMP domain LNQ37_006275 PF01170 Putative RNA methylase family UPF0020 LNQ37_006280 PF00005 ABC transporter LNQ37_006280 PF16326 ABC transporter C-terminal domain LNQ37_006280 PF12848 ABC transporter LNQ37_006285 PF04403 Paraquat-inducible protein A LNQ37_006290 PF02470 MlaD protein LNQ37_006295 PF03886 ABC-type transport auxiliary lipoprotein component LNQ37_006300 PF04957 Ribosome modulation factor LNQ37_006305 PF07977 FabA-like domain LNQ37_006310 PF13654 AAA domain LNQ37_006310 PF05362 Lon protease (S16) C-terminal proteolytic domain LNQ37_006315 PF06303 MatP N-terminal domain LNQ37_006315 PF17414 MatP C-terminal ribbon-helix-helix domain LNQ37_006320 PF00691 OmpA family LNQ37_006320 PF01389 OmpA-like transmembrane domain LNQ37_006325 PF03846 Cell division inhibitor SulA LNQ37_006330 PF04994 TfoX C-terminal domain LNQ37_006330 PF04993 TfoX N-terminal domain LNQ37_006335 PF12805 FUSC-like inner membrane protein yccS LNQ37_006340 PF03733 Inner membrane component domain LNQ37_006345 PF12462 DNA helicase IV / RNA helicase N terminal LNQ37_006345 PF00580 UvrD/REP helicase N-terminal domain LNQ37_006345 PF13361 UvrD-like helicase C-terminal domain LNQ37_006350 PF02142 MGS-like domain LNQ37_006355 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LNQ37_006360 PF13380 CoA binding domain LNQ37_006365 PF08755 Hemimethylated DNA-binding protein YccV like LNQ37_006370 PF10672 S-adenosylmethionine-dependent methyltransferase LNQ37_006370 PF17785 PUA-like domain LNQ37_006375 PF00708 Acylphosphatase LNQ37_006380 PF04358 DsrC like protein LNQ37_006390 PF00484 Carbonic anhydrase LNQ37_006395 PF03471 Transporter associated domain LNQ37_006395 PF00999 Sodium/hydrogen exchanger family LNQ37_006395 PF02080 TrkA-C domain LNQ37_006405 PF01757 Acyltransferase family LNQ37_006410 PF04349 Periplasmic glucan biosynthesis protein, MdoG LNQ37_006415 PF00535 Glycosyl transferase family 2 LNQ37_006425 PF00854 POT family LNQ37_006435 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ37_006440 PF17773 UPF0176 acylphosphatase like domain LNQ37_006440 PF12368 Rhodanase C-terminal LNQ37_006440 PF00581 Rhodanese-like domain LNQ37_006445 PF01594 AI-2E family transporter LNQ37_006450 PF00196 Bacterial regulatory proteins, luxR family LNQ37_006455 PF01266 FAD dependent oxidoreductase LNQ37_006460 PF13991 BssS protein family LNQ37_006465 PF06183 DinI-like family LNQ37_006470 PF01979 Amidohydrolase family LNQ37_006475 PF03992 Antibiotic biosynthesis monooxygenase LNQ37_006485 PF00575 S1 RNA binding domain LNQ37_006485 PF12111 Polyribonucleotide phosphorylase C terminal LNQ37_006485 PF10150 Ribonuclease E/G family LNQ37_006490 PF00849 RNA pseudouridylate synthase LNQ37_006490 PF01479 S4 domain LNQ37_006495 PF02545 Maf-like protein LNQ37_006500 PF02620 Large ribosomal RNA subunit accumulation protein YceD LNQ37_006505 PF01783 Ribosomal L32p protein family LNQ37_006510 PF02504 Fatty acid synthesis protein LNQ37_006515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LNQ37_006515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LNQ37_006520 PF00698 Acyl transferase domain LNQ37_006530 PF00550 Phosphopantetheine attachment site LNQ37_006535 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ37_006535 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ37_006540 PF01063 Amino-transferase class IV LNQ37_006545 PF02618 YceG-like family LNQ37_006550 PF02223 Thymidylate kinase LNQ37_006555 PF09115 DNA polymerase III, delta subunit, C terminal LNQ37_006560 PF01026 TatD related DNase LNQ37_006565 PF00367 phosphotransferase system, EIIB LNQ37_006565 PF02378 Phosphotransferase system, EIIC LNQ37_006570 PF01230 HIT domain LNQ37_006575 PF07233 Protein of unknown function (DUF1425) LNQ37_006580 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LNQ37_006580 PF13036 Peptidoglycan-synthase activator LpoB LNQ37_006585 PF01636 Phosphotransferase enzyme family LNQ37_006590 PF00933 Glycosyl hydrolase family 3 N terminal domain LNQ37_006595 PF05728 Uncharacterised protein family (UPF0227) LNQ37_006600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_006605 PF05433 Glycine zipper 2TM domain LNQ37_006610 PF03461 TRCF domain LNQ37_006610 PF00270 DEAD/DEAH box helicase LNQ37_006610 PF17757 UvrB interaction domain LNQ37_006610 PF00271 Helicase conserved C-terminal domain LNQ37_006610 PF02559 CarD-like/TRCF domain LNQ37_006615 PF02687 FtsX-like permease family LNQ37_006615 PF12704 MacB-like periplasmic core domain LNQ37_006620 PF00005 ABC transporter LNQ37_006625 PF02687 FtsX-like permease family LNQ37_006625 PF12704 MacB-like periplasmic core domain LNQ37_006630 PF00480 ROK family LNQ37_006635 PF02146 Sir2 family LNQ37_006640 PF07687 Peptidase dimerisation domain LNQ37_006640 PF01546 Peptidase family M20/M25/M40 LNQ37_006645 PF08007 Cupin superfamily protein LNQ37_006650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_006650 PF08918 PhoQ Sensor LNQ37_006655 PF00486 Transcriptional regulatory protein, C terminal LNQ37_006655 PF00072 Response regulator receiver domain LNQ37_006665 PF00206 Lyase LNQ37_006665 PF08328 Adenylosuccinate lyase C-terminal LNQ37_006670 PF04356 Protein of unknown function (DUF489) LNQ37_006680 PF00293 NUDIX domain LNQ37_006685 PF00849 RNA pseudouridylate synthase LNQ37_006690 PF00180 Isocitrate/isopropylmalate dehydrogenase LNQ37_006695 PF03472 Autoinducer binding domain LNQ37_006695 PF00196 Bacterial regulatory proteins, luxR family LNQ37_006700 PF00765 Autoinducer synthase LNQ37_006705 PF00232 Glycosyl hydrolase family 1 LNQ37_006715 PF01432 Peptidase family M3 LNQ37_006720 PF02203 Tar ligand binding domain homologue LNQ37_006720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_006720 PF00672 HAMP domain LNQ37_006725 PF03390 2-hydroxycarboxylate transporter family LNQ37_006730 PF00072 Response regulator receiver domain LNQ37_006740 PF00939 Sodium:sulfate symporter transmembrane region LNQ37_006745 PF00413 Matrixin LNQ37_006745 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LNQ37_006745 PF08548 Peptidase M10 serralysin C terminal LNQ37_006750 PF02974 Protease inhibitor Inh LNQ37_006755 PF00664 ABC transporter transmembrane region LNQ37_006755 PF00005 ABC transporter LNQ37_006760 PF00529 HlyD membrane-fusion protein of T1SS LNQ37_006765 PF02321 Outer membrane efflux protein LNQ37_006780 PF12833 Helix-turn-helix domain LNQ37_006780 PF02311 AraC-like ligand binding domain LNQ37_006785 PF02562 PhoH-like protein LNQ37_006790 PF01699 Sodium/calcium exchanger protein LNQ37_006795 PF08021 Siderophore-interacting FAD-binding domain LNQ37_006795 PF04954 Siderophore-interacting protein LNQ37_006800 PF07730 Histidine kinase LNQ37_006800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LNQ37_006800 PF00672 HAMP domain LNQ37_006800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_006810 PF02322 Cytochrome bd terminal oxidase subunit II LNQ37_006815 PF01654 Cytochrome bd terminal oxidase subunit I LNQ37_006820 PF00155 Aminotransferase class I and II LNQ37_006820 PF00392 Bacterial regulatory proteins, gntR family LNQ37_006825 PF00202 Aminotransferase class-III LNQ37_006830 PF04958 Arginine N-succinyltransferase beta subunit LNQ37_006835 PF00171 Aldehyde dehydrogenase family LNQ37_006840 PF04996 Succinylarginine dihydrolase LNQ37_006850 PF00267 Gram-negative porin LNQ37_006860 PF01979 Amidohydrolase family LNQ37_006865 PF07702 UTRA domain LNQ37_006865 PF00392 Bacterial regulatory proteins, gntR family LNQ37_006870 PF01979 Amidohydrolase family LNQ37_006875 PF05962 HutD LNQ37_006880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_006880 PF03466 LysR substrate binding domain LNQ37_006890 PF03824 High-affinity nickel-transport protein LNQ37_006895 PF07503 HypF finger LNQ37_006895 PF01300 Telomere recombination LNQ37_006895 PF17788 HypF Kae1-like domain LNQ37_006895 PF00708 Acylphosphatase LNQ37_006900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ37_006900 PF00384 Molybdopterin oxidoreductase LNQ37_006900 PF01568 Molydopterin dinucleotide binding domain LNQ37_006905 PF13247 4Fe-4S dicluster domain LNQ37_006905 PF12800 4Fe-4S binding domain LNQ37_006910 PF01750 Hydrogenase maturation protease LNQ37_006915 PF07450 Formate hydrogenlyase maturation protein HycH LNQ37_006920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LNQ37_006925 PF12838 4Fe-4S dicluster domain LNQ37_006930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LNQ37_006930 PF00374 Nickel-dependent hydrogenase LNQ37_006930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LNQ37_006935 PF00146 NADH dehydrogenase LNQ37_006940 PF00361 Proton-conducting membrane transporter LNQ37_006945 PF13247 4Fe-4S dicluster domain LNQ37_006950 PF11046 Transcriptional repressor of hyc and hyp operons LNQ37_006955 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LNQ37_006960 PF02492 CobW/HypB/UreG, nucleotide-binding domain LNQ37_006965 PF01455 HupF/HypC family LNQ37_006970 PF01924 Hydrogenase formation hypA family LNQ37_006975 PF00586 AIR synthase related protein, N-terminal domain LNQ37_006975 PF02769 AIR synthase related protein, C-terminal domain LNQ37_006980 PF01590 GAF domain LNQ37_006980 PF02954 Bacterial regulatory protein, Fis family LNQ37_006980 PF00158 Sigma-54 interaction domain LNQ37_007015 PF07693 KAP family P-loop domain LNQ37_007025 PF06071 Protein of unknown function (DUF933) LNQ37_007025 PF01926 50S ribosome-binding GTPase LNQ37_007035 PF01195 Peptidyl-tRNA hydrolase LNQ37_007040 PF10762 Protein of unknown function (DUF2583) LNQ37_007045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LNQ37_007045 PF14572 Phosphoribosyl synthetase-associated domain LNQ37_007050 PF00288 GHMP kinases N terminal domain LNQ37_007050 PF08544 GHMP kinases C terminal LNQ37_007055 PF03550 Outer membrane lipoprotein LolB LNQ37_007060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LNQ37_007060 PF01488 Shikimate / quinate 5-dehydrogenase LNQ37_007060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LNQ37_007065 PF00472 RF-1 domain LNQ37_007065 PF03462 PCRF domain LNQ37_007070 PF17827 PrmC N-terminal domain LNQ37_007070 PF13847 Methyltransferase domain LNQ37_007075 PF04247 Invasion gene expression up-regulator, SirB LNQ37_007080 PF13369 Transglutaminase-like superfamily LNQ37_007085 PF00793 DAHP synthetase I family LNQ37_007090 PF00916 Sulfate permease family LNQ37_007090 PF01740 STAS domain LNQ37_007095 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_007105 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ37_007115 PF00854 POT family LNQ37_007120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ37_007125 PF02811 PHP domain LNQ37_007130 PF02613 Nitrate reductase delta subunit LNQ37_007135 PF07273 Protein of unknown function (DUF1439) LNQ37_007145 PF07690 Major Facilitator Superfamily LNQ37_007150 PF13302 Acetyltransferase (GNAT) domain LNQ37_007155 PF04337 Protein of unknown function, DUF480 LNQ37_007160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ37_007165 PF03023 Lipid II flippase MurJ LNQ37_007170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ37_007170 PF17287 POTRA domain LNQ37_007170 PF08479 POTRA domain, ShlB-type LNQ37_007175 PF13332 Hemagglutinin repeat LNQ37_007175 PF05860 haemagglutination activity domain LNQ37_007185 PF03485 Arginyl tRNA synthetase N terminal domain LNQ37_007185 PF05746 DALR anticodon binding domain LNQ37_007185 PF00750 tRNA synthetases class I (R) LNQ37_007190 PF06185 YecM protein LNQ37_007195 PF03932 CutC family LNQ37_007200 PF08003 Protein of unknown function (DUF1698) LNQ37_007205 PF13649 Methyltransferase domain LNQ37_007210 PF01124 MAPEG family LNQ37_007215 PF01904 Protein of unknown function DUF72 LNQ37_007225 PF02938 GAD domain LNQ37_007225 PF00152 tRNA synthetases class II (D, K and N) LNQ37_007225 PF01336 OB-fold nucleic acid binding domain LNQ37_007230 PF00293 NUDIX domain LNQ37_007235 PF01709 Transcriptional regulator LNQ37_007240 PF02075 Crossover junction endodeoxyribonuclease RuvC LNQ37_007245 PF07499 RuvA, C-terminal domain LNQ37_007245 PF01330 RuvA N terminal domain LNQ37_007250 PF05491 RuvB C-terminal winged helix domain LNQ37_007250 PF05496 Holliday junction DNA helicase RuvB P-loop domain LNQ37_007250 PF17864 RuvB AAA lid domain LNQ37_007255 PF00854 POT family LNQ37_007260 PF00950 ABC 3 transport family LNQ37_007265 PF00005 ABC transporter LNQ37_007270 PF01297 Zinc-uptake complex component A periplasmic LNQ37_007275 PF01476 LysM domain LNQ37_007275 PF08525 Opacity-associated protein A N-terminal motif LNQ37_007275 PF01551 Peptidase family M23 LNQ37_007280 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ37_007285 PF02887 Pyruvate kinase, alpha/beta domain LNQ37_007285 PF00224 Pyruvate kinase, barrel domain LNQ37_007290 PF01418 Helix-turn-helix domain, rpiR family LNQ37_007290 PF01380 SIS domain LNQ37_007295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LNQ37_007295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LNQ37_007300 PF01081 KDPG and KHG aldolase LNQ37_007305 PF00893 Small Multidrug Resistance protein LNQ37_007310 PF00893 Small Multidrug Resistance protein LNQ37_007315 PF01042 Endoribonuclease L-PSP LNQ37_007320 PF13307 Helicase C-terminal domain LNQ37_007320 PF04851 Type III restriction enzyme, res subunit LNQ37_007325 PF00814 Glycoprotease family LNQ37_007330 PF03843 Outer membrane lipoprotein Slp family LNQ37_007335 PF13193 AMP-binding enzyme C-terminal domain LNQ37_007335 PF00501 AMP-binding enzyme LNQ37_007340 PF00570 HRDC domain LNQ37_007340 PF01612 3'-5' exonuclease LNQ37_007345 PF03776 Septum formation topological specificity factor MinE LNQ37_007350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LNQ37_007355 PF05209 Septum formation inhibitor MinC, N-terminal domain LNQ37_007355 PF03775 Septum formation inhibitor MinC, C-terminal domain LNQ37_007360 PF05166 YcgL domain LNQ37_007365 PF01557 Fumarylacetoacetate (FAA) hydrolase family LNQ37_007370 PF03692 Putative zinc- or iron-chelating domain LNQ37_007385 PF02600 Disulfide bond formation protein DsbB LNQ37_007390 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LNQ37_007395 PF07840 FadR C-terminal domain LNQ37_007395 PF00392 Bacterial regulatory proteins, gntR family LNQ37_007400 PF04293 SpoVR like protein LNQ37_007405 PF01266 FAD dependent oxidoreductase LNQ37_007410 PF00842 Alanine racemase, C-terminal domain LNQ37_007410 PF01168 Alanine racemase, N-terminal domain LNQ37_007415 PF07690 Major Facilitator Superfamily LNQ37_007425 PF00563 EAL domain LNQ37_007425 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_007425 PF13426 PAS domain LNQ37_007430 PF03466 LysR substrate binding domain LNQ37_007430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_007435 PF03306 Alpha-acetolactate decarboxylase LNQ37_007440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ37_007440 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ37_007440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ37_007445 PF04285 Protein of unknown function (DUF444) LNQ37_007450 PF08298 PrkA AAA domain LNQ37_007450 PF06798 PrkA serine protein kinase C-terminal domain LNQ37_007460 PF06629 MltA-interacting protein MipA LNQ37_007465 PF00884 Sulfatase LNQ37_007470 PF01263 Aldose 1-epimerase LNQ37_007475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LNQ37_007475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LNQ37_007480 PF01641 SelR domain LNQ37_007485 PF07023 Protein of unknown function (DUF1315) LNQ37_007490 PF00857 Isochorismatase family LNQ37_007495 PF00710 Asparaginase, N-terminal LNQ37_007495 PF17763 Glutaminase/Asparaginase C-terminal domain LNQ37_007500 PF01343 Peptidase family S49 LNQ37_007505 PF00881 Nitroreductase family LNQ37_007510 PF02769 AIR synthase related protein, C-terminal domain LNQ37_007510 PF00586 AIR synthase related protein, N-terminal domain LNQ37_007515 PF01131 DNA topoisomerase LNQ37_007515 PF01751 Toprim domain LNQ37_007520 PF07383 Protein of unknown function (DUF1496) LNQ37_007525 PF00293 NUDIX domain LNQ37_007530 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ37_007540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_007540 PF03466 LysR substrate binding domain LNQ37_007565 PF01842 ACT domain LNQ37_007565 PF00551 Formyl transferase LNQ37_007570 PF02810 SEC-C motif LNQ37_007575 PF01734 Patatin-like phospholipase LNQ37_007580 PF00072 Response regulator receiver domain LNQ37_007585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNQ37_007585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNQ37_007585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNQ37_007590 PF00816 H-NS histone family LNQ37_007595 PF00265 Thymidine kinase LNQ37_007600 PF00171 Aldehyde dehydrogenase family LNQ37_007600 PF00465 Iron-containing alcohol dehydrogenase LNQ37_007610 PF01914 MarC family integral membrane protein LNQ37_007615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_007620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_007625 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_007630 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_007630 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ37_007635 PF00005 ABC transporter LNQ37_007635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_007640 PF00005 ABC transporter LNQ37_007640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_007645 PF04269 Protein of unknown function, DUF440 LNQ37_007650 PF13396 Phospholipase_D-nuclease N-terminal LNQ37_007650 PF13091 PLD-like domain LNQ37_007670 PF03795 YCII-related domain LNQ37_007685 PF00486 Transcriptional regulatory protein, C terminal LNQ37_007695 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_007695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_007700 PF13953 PapC C-terminal domain LNQ37_007700 PF13954 PapC N-terminal domain LNQ37_007700 PF00577 Outer membrane usher protein LNQ37_007720 PF03544 Gram-negative bacterial TonB protein C-terminal LNQ37_007725 PF03061 Thioesterase superfamily LNQ37_007730 PF04279 Intracellular septation protein A LNQ37_007735 PF01740 STAS domain LNQ37_007735 PF00916 Sulfate permease family LNQ37_007745 PF03692 Putative zinc- or iron-chelating domain LNQ37_007750 PF03922 OmpW family LNQ37_007760 PF00290 Tryptophan synthase alpha chain LNQ37_007765 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_007770 PF00218 Indole-3-glycerol phosphate synthase LNQ37_007770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LNQ37_007775 PF00591 Glycosyl transferase family, a/b domain LNQ37_007775 PF02885 Glycosyl transferase family, helical bundle domain LNQ37_007780 PF00117 Glutamine amidotransferase class-I LNQ37_007785 PF00425 chorismate binding enzyme LNQ37_007785 PF04715 Anthranilate synthase component I, N terminal region LNQ37_007790 PF02811 PHP domain LNQ37_007795 PF01300 Telomere recombination LNQ37_007800 PF00849 RNA pseudouridylate synthase LNQ37_007800 PF01479 S4 domain LNQ37_007805 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LNQ37_007810 PF00106 short chain dehydrogenase LNQ37_007815 PF01343 Peptidase family S49 LNQ37_007815 PF08496 Peptidase family S49 N-terminal LNQ37_007820 PF10692 Protein of unknown function (DUF2498) LNQ37_007825 PF08272 Topoisomerase I zinc-ribbon-like LNQ37_007825 PF01131 DNA topoisomerase LNQ37_007825 PF01751 Toprim domain LNQ37_007825 PF01396 Topoisomerase DNA binding C4 zinc finger LNQ37_007830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_007830 PF03466 LysR substrate binding domain LNQ37_007845 PF00330 Aconitase family (aconitate hydratase) LNQ37_007845 PF00694 Aconitase C-terminal domain LNQ37_007850 PF00925 GTP cyclohydrolase II LNQ37_007855 PF01569 PAP2 superfamily LNQ37_007860 PF06305 Lipopolysaccharide assembly protein A domain LNQ37_007865 PF18073 Rubredoxin metal binding domain LNQ37_007875 PF07338 Protein of unknown function (DUF1471) LNQ37_007880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LNQ37_007885 PF01253 Translation initiation factor SUI1 LNQ37_007890 PF05433 Glycine zipper 2TM domain LNQ37_007895 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNQ37_007900 PF05231 MASE1 LNQ37_007900 PF00563 EAL domain LNQ37_007900 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_007900 PF08447 PAS fold LNQ37_007900 PF08448 PAS fold LNQ37_007900 PF13426 PAS domain LNQ37_007905 PF00575 S1 RNA binding domain LNQ37_007905 PF08206 Ribonuclease B OB domain LNQ37_007905 PF00773 RNB domain LNQ37_007910 PF10576 Iron-sulfur binding domain of endonuclease III LNQ37_007910 PF00633 Helix-hairpin-helix motif LNQ37_007910 PF00730 HhH-GPD superfamily base excision DNA repair protein LNQ37_007915 PF02508 Rnf-Nqr subunit, membrane protein LNQ37_007920 PF04205 FMN-binding domain LNQ37_007925 PF03116 NQR2, RnfD, RnfE family LNQ37_007930 PF12833 Helix-turn-helix domain LNQ37_007930 PF06445 GyrI-like small molecule binding domain LNQ37_007935 PF13237 4Fe-4S dicluster domain LNQ37_007935 PF13375 RnfC Barrel sandwich hybrid domain LNQ37_007935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LNQ37_007935 PF10531 SLBB domain LNQ37_007940 PF04060 Putative Fe-S cluster LNQ37_007945 PF02508 Rnf-Nqr subunit, membrane protein LNQ37_007950 PF10754 Protein of unknown function (DUF2569) LNQ37_007955 PF01268 Formate--tetrahydrofolate ligase LNQ37_007960 PF09313 Domain of unknown function (DUF1971) LNQ37_007960 PF03848 Tellurite resistance protein TehB LNQ37_007965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ37_007965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LNQ37_007970 PF13593 SBF-like CPA transporter family (DUF4137) LNQ37_007975 PF00962 Adenosine/AMP deaminase LNQ37_007980 PF06097 Bacterial protein of unknown function (DUF945) LNQ37_007985 PF01238 Phosphomannose isomerase type I LNQ37_007990 PF10415 Fumarase C C-terminus LNQ37_007990 PF00206 Lyase LNQ37_007995 PF05472 DNA replication terminus site-binding protein (Ter protein) LNQ37_008000 PF00480 ROK family LNQ37_008010 PF00654 Voltage gated chloride channel LNQ37_008015 PF06649 Protein of unknown function (DUF1161) LNQ37_008020 PF06932 Protein of unknown function (DUF1283) LNQ37_008025 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LNQ37_008050 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LNQ37_008050 PF01048 Phosphorylase superfamily LNQ37_008090 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_008100 PF06445 GyrI-like small molecule binding domain LNQ37_008105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNQ37_008105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LNQ37_008110 PF00027 Cyclic nucleotide-binding domain LNQ37_008110 PF13545 Crp-like helix-turn-helix domain LNQ37_008115 PF00582 Universal stress protein family LNQ37_008125 PF00455 DeoR C terminal sensor domain LNQ37_008125 PF08220 DeoR-like helix-turn-helix domain LNQ37_008130 PF03611 PTS system sugar-specific permease component LNQ37_008135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ37_008140 PF00596 Class II Aldolase and Adducin N-terminal domain LNQ37_008145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LNQ37_008150 PF01261 Xylose isomerase-like TIM barrel LNQ37_008155 PF02233 NAD(P) transhydrogenase beta subunit LNQ37_008160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LNQ37_008160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LNQ37_008160 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LNQ37_008165 PF07338 Protein of unknown function (DUF1471) LNQ37_008170 PF13520 Amino acid permease LNQ37_008180 PF00072 Response regulator receiver domain LNQ37_008180 PF00486 Transcriptional regulatory protein, C terminal LNQ37_008185 PF00672 HAMP domain LNQ37_008185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_008185 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_008190 PF00080 Copper/zinc superoxide dismutase (SODC) LNQ37_008200 PF12833 Helix-turn-helix domain LNQ37_008205 PF01161 Phosphatidylethanolamine-binding protein LNQ37_008215 PF00089 Trypsin LNQ37_008220 PF00270 DEAD/DEAH box helicase LNQ37_008220 PF11898 Domain of unknown function (DUF3418) LNQ37_008220 PF04408 Helicase associated domain (HA2) LNQ37_008220 PF00271 Helicase conserved C-terminal domain LNQ37_008220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LNQ37_008225 PF02525 Flavodoxin-like fold LNQ37_008230 PF07027 Protein of unknown function (DUF1318) LNQ37_008235 PF13617 YnbE-like lipoprotein LNQ37_008245 PF11739 Dicarboxylate transport LNQ37_008250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ37_008250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ37_008255 PF03724 META domain LNQ37_008260 PF03891 Domain of unknown function (DUF333) LNQ37_008265 PF02308 MgtC family LNQ37_008270 PF00893 Small Multidrug Resistance protein LNQ37_008275 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LNQ37_008275 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LNQ37_008275 PF10371 Domain of unknown function LNQ37_008275 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LNQ37_008275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ37_008280 PF01171 PP-loop family LNQ37_008285 PF01544 CorA-like Mg2+ transporter protein LNQ37_008290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_008295 PF00246 Zinc carboxypeptidase LNQ37_008300 PF13378 Enolase C-terminal domain-like LNQ37_008300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LNQ37_008305 PF08534 Redoxin LNQ37_008310 PF18024 Helix-turn-helix domain LNQ37_008310 PF00158 Sigma-54 interaction domain LNQ37_008315 PF09722 Protein of unknown function (DUF2384) LNQ37_008320 PF08808 RES domain LNQ37_008325 PF05128 Domain of unknown function (DUF697) LNQ37_008330 PF04317 YcjX-like family, DUF463 LNQ37_008335 PF09584 Phage shock protein PspD (Phageshock_PspD) LNQ37_008340 PF04024 PspC domain LNQ37_008345 PF06667 Phage shock protein B LNQ37_008350 PF04012 PspA/IM30 family LNQ37_008355 PF00158 Sigma-54 interaction domain LNQ37_008355 PF02954 Bacterial regulatory protein, Fis family LNQ37_008365 PF02917 Pertussis toxin, subunit 1 LNQ37_008370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_008375 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_008380 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ37_008380 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_008385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_008385 PF00005 ABC transporter LNQ37_008390 PF00005 ABC transporter LNQ37_008400 PF00854 POT family LNQ37_008410 PF01556 DnaJ C terminal domain LNQ37_008410 PF00226 DnaJ domain LNQ37_008420 PF04893 Yip1 domain LNQ37_008430 PF11656 YjbD family (DUF3811) LNQ37_008435 PF02798 Glutathione S-transferase, N-terminal domain LNQ37_008435 PF00043 Glutathione S-transferase, C-terminal domain LNQ37_008440 PF08543 Phosphomethylpyrimidine kinase LNQ37_008445 PF00579 tRNA synthetases class I (W and Y) LNQ37_008445 PF01479 S4 domain LNQ37_008450 PF01243 Pyridoxamine 5'-phosphate oxidase LNQ37_008450 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LNQ37_008455 PF03702 Anhydro-N-acetylmuramic acid kinase LNQ37_008460 PF05433 Glycine zipper 2TM domain LNQ37_008465 PF01047 MarR family LNQ37_008475 PF00248 Aldo/keto reductase family LNQ37_008480 PF06945 Protein of unknown function (DUF1289) LNQ37_008485 PF08019 Phosphoethanolamine transferase EptA/EptB LNQ37_008485 PF00884 Sulfatase LNQ37_008490 PF00440 Bacterial regulatory proteins, tetR family LNQ37_008490 PF16925 Tetracyclin repressor-like, C-terminal domain LNQ37_008495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNQ37_008500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNQ37_008505 PF00929 Exonuclease LNQ37_008510 PF00462 Glutaredoxin LNQ37_008515 PF00877 NlpC/P60 family LNQ37_008520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNQ37_008520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNQ37_008530 PF00356 Bacterial regulatory proteins, lacI family LNQ37_008535 PF03466 LysR substrate binding domain LNQ37_008535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_008540 PF07690 Major Facilitator Superfamily LNQ37_008550 PF00677 Lumazine binding domain LNQ37_008555 PF01554 MatE LNQ37_008575 PF02887 Pyruvate kinase, alpha/beta domain LNQ37_008575 PF00224 Pyruvate kinase, barrel domain LNQ37_008580 PF04728 Lipoprotein leucine-zipper LNQ37_008585 PF03734 L,D-transpeptidase catalytic domain LNQ37_008585 PF01476 LysM domain LNQ37_008585 PF17969 L,D-transpeptidase C-terminal domain LNQ37_008590 PF02657 Fe-S metabolism associated domain LNQ37_008595 PF00266 Aminotransferase class-V LNQ37_008600 PF01458 Uncharacterized protein family (UPF0051) LNQ37_008605 PF00005 ABC transporter LNQ37_008610 PF01458 Uncharacterized protein family (UPF0051) LNQ37_008615 PF01521 Iron-sulphur cluster biosynthesis LNQ37_008620 PF03061 Thioesterase superfamily LNQ37_008625 PF01565 FAD binding domain LNQ37_008625 PF02913 FAD linked oxidases, C-terminal domain LNQ37_008625 PF13183 4Fe-4S dicluster domain LNQ37_008630 PF01594 AI-2E family transporter LNQ37_008640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LNQ37_008640 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ37_008640 PF00391 PEP-utilising enzyme, mobile domain LNQ37_008645 PF03618 Kinase/pyrophosphorylase LNQ37_008650 PF00793 DAHP synthetase I family LNQ37_008655 PF10636 Hemin uptake protein hemP LNQ37_008660 PF00593 TonB dependent receptor LNQ37_008660 PF07715 TonB-dependent Receptor Plug Domain LNQ37_008665 PF05171 Haemin-degrading HemS.ChuX domain LNQ37_008670 PF01497 Periplasmic binding protein LNQ37_008675 PF01032 FecCD transport family LNQ37_008680 PF00005 ABC transporter LNQ37_008685 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LNQ37_008690 PF10437 Bacterial lipoate protein ligase C-terminus LNQ37_008690 PF03099 Biotin/lipoate A/B protein ligase family LNQ37_008695 PF00877 NlpC/P60 family LNQ37_008705 PF00892 EamA-like transporter family LNQ37_008710 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LNQ37_008715 PF01522 Polysaccharide deacetylase LNQ37_008720 PF00551 Formyl transferase LNQ37_008720 PF01370 NAD dependent epimerase/dehydratase family LNQ37_008720 PF02911 Formyl transferase, C-terminal domain LNQ37_008725 PF00535 Glycosyl transferase family 2 LNQ37_008730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNQ37_008735 PF00005 ABC transporter LNQ37_008740 PF01032 FecCD transport family LNQ37_008745 PF00589 Phage integrase family LNQ37_008745 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_008760 PF02661 Fic/DOC family LNQ37_008775 PF05154 TM2 domain LNQ37_008780 PF00216 Bacterial DNA-binding protein LNQ37_008785 PF03483 B3/4 domain LNQ37_008785 PF03484 tRNA synthetase B5 domain LNQ37_008785 PF03147 Ferredoxin-fold anticodon binding domain LNQ37_008785 PF01588 Putative tRNA binding domain LNQ37_008785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LNQ37_008790 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LNQ37_008790 PF01409 tRNA synthetases class II core domain (F) LNQ37_008795 PF00453 Ribosomal protein L20 LNQ37_008800 PF01632 Ribosomal protein L35 LNQ37_008805 PF00707 Translation initiation factor IF-3, C-terminal domain LNQ37_008805 PF05198 Translation initiation factor IF-3, N-terminal domain LNQ37_008810 PF03129 Anticodon binding domain LNQ37_008810 PF02824 TGS domain LNQ37_008810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ37_008810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNQ37_008845 PF01914 MarC family integral membrane protein LNQ37_008850 PF01464 Transglycosylase SLT domain LNQ37_008855 PF01297 Zinc-uptake complex component A periplasmic LNQ37_008860 PF00005 ABC transporter LNQ37_008865 PF00950 ABC 3 transport family LNQ37_008870 PF00950 ABC 3 transport family LNQ37_008875 PF03881 Fructosamine kinase LNQ37_008880 PF14002 YniB-like protein LNQ37_008885 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_008890 PF04307 LexA-binding, inner membrane-associated putative hydrolase LNQ37_008895 PF00375 Sodium:dicarboxylate symporter family LNQ37_008900 PF01510 N-acetylmuramoyl-L-alanine amidase LNQ37_008905 PF09339 IclR helix-turn-helix domain LNQ37_008905 PF01614 Bacterial transcriptional regulator LNQ37_008910 PF07690 Major Facilitator Superfamily LNQ37_008920 PF01435 Peptidase family M48 LNQ37_008925 PF11818 C-terminal domain of tail specific protease (DUF3340) LNQ37_008925 PF00595 PDZ domain LNQ37_008925 PF03572 Peptidase family S41 LNQ37_008925 PF17804 Tail specific protease N-terminal domain LNQ37_008930 PF17516 ProQ C-terminal domain LNQ37_008930 PF04352 ProQ/FINO family LNQ37_008935 PF13185 GAF domain LNQ37_008940 PF04403 Paraquat-inducible protein A LNQ37_008945 PF02470 MlaD protein LNQ37_008950 PF01590 GAF domain LNQ37_008950 PF00563 EAL domain LNQ37_008950 PF00360 Phytochrome region LNQ37_008950 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_008955 PF07351 Protein of unknown function (DUF1480) LNQ37_008980 PF05643 Putative bacterial lipoprotein (DUF799) LNQ37_008990 PF03783 Curli production assembly/transport component CsgG LNQ37_008995 PF10753 Toxin GhoT_OrtT LNQ37_009015 PF00144 Beta-lactamase LNQ37_009025 PF10709 Protein of unknown function (DUF2511) LNQ37_009030 PF05425 Copper resistance protein D LNQ37_009035 PF04234 CopC domain LNQ37_009040 PF00210 Ferritin-like domain LNQ37_009045 PF06440 DNA polymerase III, theta subunit LNQ37_009050 PF00561 alpha/beta hydrolase fold LNQ37_009055 PF00929 Exonuclease LNQ37_009060 PF00326 Prolyl oligopeptidase family LNQ37_009060 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LNQ37_009065 PF13995 YebF-like protein LNQ37_009070 PF04266 ASCH domain LNQ37_009075 PF07130 YebG protein LNQ37_009080 PF03880 DbpA RNA binding domain LNQ37_009080 PF00270 DEAD/DEAH box helicase LNQ37_009080 PF00271 Helicase conserved C-terminal domain LNQ37_009085 PF02222 ATP-grasp domain LNQ37_009090 PF03701 Uncharacterised protein family (UPF0181) LNQ37_009095 PF04715 Anthranilate synthase component I, N terminal region LNQ37_009095 PF00425 chorismate binding enzyme LNQ37_009100 PF00293 NUDIX domain LNQ37_009105 PF03313 Serine dehydratase alpha chain LNQ37_009105 PF03315 Serine dehydratase beta chain LNQ37_009115 PF03471 Transporter associated domain LNQ37_009115 PF03741 Integral membrane protein TerC family LNQ37_009120 PF03610 PTS system fructose IIA component LNQ37_009120 PF03830 PTS system sorbose subfamily IIB component LNQ37_009125 PF03609 PTS system sorbose-specific iic component LNQ37_009130 PF03613 PTS system mannose/fructose/sorbose family IID component LNQ37_009135 PF06173 Protein of unknown function (DUF986) LNQ37_009140 PF02659 Putative manganese efflux pump LNQ37_009145 PF02441 Flavoprotein LNQ37_009160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNQ37_009160 PF02770 Acyl-CoA dehydrogenase, middle domain LNQ37_009160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNQ37_009170 PF00732 GMC oxidoreductase LNQ37_009170 PF05199 GMC oxidoreductase LNQ37_009175 PF00501 AMP-binding enzyme LNQ37_009175 PF13193 AMP-binding enzyme C-terminal domain LNQ37_009175 PF00668 Condensation domain LNQ37_009175 PF00550 Phosphopantetheine attachment site LNQ37_009185 PF13693 Winged helix-turn-helix DNA-binding LNQ37_009250 PF06252 Protein of unknown function (DUF1018) LNQ37_009305 PF06074 Protein of unknown function (DUF935) LNQ37_009330 PF10124 Mu-like prophage major head subunit gpT LNQ37_009355 PF04984 Phage tail sheath protein subtilisin-like domain LNQ37_009355 PF17482 Phage tail sheath C-terminal domain LNQ37_009405 PF07484 Phage Tail Collar Domain LNQ37_009405 PF03335 Phage tail fibre repeat LNQ37_009405 PF08400 Prophage tail fibre N-terminal LNQ37_009410 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_009415 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_009420 PF00239 Resolvase, N terminal domain LNQ37_009420 PF02796 Helix-turn-helix domain of resolvase LNQ37_009425 PF07690 Major Facilitator Superfamily LNQ37_009445 PF13847 Methyltransferase domain LNQ37_009450 PF03717 Penicillin-binding Protein dimerisation domain LNQ37_009450 PF00905 Penicillin binding protein transpeptidase domain LNQ37_009455 PF02578 Multi-copper polyphenol oxidoreductase laccase LNQ37_009460 PF00313 'Cold-shock' DNA-binding domain LNQ37_009465 PF10736 Protein of unknown function (DUF2627) LNQ37_009470 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LNQ37_009475 PF00324 Amino acid permease LNQ37_009490 PF13974 YebO-like protein LNQ37_009495 PF13998 MgrB protein LNQ37_009500 PF13996 YobH-like protein LNQ37_009505 PF10964 Protein of unknown function (DUF2766) LNQ37_009510 PF12833 Helix-turn-helix domain LNQ37_009525 PF13520 Amino acid permease LNQ37_009530 PF00664 ABC transporter transmembrane region LNQ37_009530 PF00005 ABC transporter LNQ37_009540 PF01590 GAF domain LNQ37_009540 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_009540 PF00360 Phytochrome region LNQ37_009540 PF00563 EAL domain LNQ37_009545 PF03372 Endonuclease/Exonuclease/phosphatase family LNQ37_009555 PF06411 HdeA/HdeB family LNQ37_009560 PF01820 D-ala D-ala ligase N-terminus LNQ37_009560 PF07478 D-ala D-ala ligase C-terminus LNQ37_009575 PF08241 Methyltransferase domain LNQ37_009580 PF00313 'Cold-shock' DNA-binding domain LNQ37_009585 PF00313 'Cold-shock' DNA-binding domain LNQ37_009590 PF00313 'Cold-shock' DNA-binding domain LNQ37_009595 PF00313 'Cold-shock' DNA-binding domain LNQ37_009605 PF04794 YdjC-like protein LNQ37_009610 PF12833 Helix-turn-helix domain LNQ37_009610 PF07883 Cupin domain LNQ37_009615 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LNQ37_009620 PF00232 Glycosyl hydrolase family 1 LNQ37_009625 PF02378 Phosphotransferase system, EIIC LNQ37_009630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ37_009635 PF00849 RNA pseudouridylate synthase LNQ37_009635 PF01479 S4 domain LNQ37_009645 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LNQ37_009650 PF03553 Na+/H+ antiporter family LNQ37_009660 PF13520 Amino acid permease LNQ37_009675 PF00849 RNA pseudouridylate synthase LNQ37_009680 PF00282 Pyridoxal-dependent decarboxylase conserved domain LNQ37_009685 PF13520 Amino acid permease LNQ37_009690 PF04960 Glutaminase LNQ37_009720 PF13673 Acetyltransferase (GNAT) domain LNQ37_009730 PF00034 Cytochrome c LNQ37_009730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LNQ37_009740 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_009745 PF00005 ABC transporter LNQ37_009755 PF00672 HAMP domain LNQ37_009755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_009755 PF02203 Tar ligand binding domain homologue LNQ37_009760 PF00665 Integrase core domain LNQ37_009760 PF13333 Integrase core domain LNQ37_009760 PF13276 HTH-like domain LNQ37_009765 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_009765 PF00589 Phage integrase family LNQ37_009800 PF17282 Family of unknown function (DUF5347) LNQ37_009805 PF12961 Domain of unknown function (DUF3850) LNQ37_009810 PF00929 Exonuclease LNQ37_009815 PF02086 D12 class N6 adenine-specific DNA methyltransferase LNQ37_009825 PF05840 Bacteriophage replication gene A protein (GPA) LNQ37_009835 PF06689 ClpX C4-type zinc finger LNQ37_009835 PF07724 AAA domain (Cdc48 subfamily) LNQ37_009835 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ37_009930 PF07484 Phage Tail Collar Domain LNQ37_009935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_010000 PF01066 CDP-alcohol phosphatidyltransferase LNQ37_010005 PF01541 GIY-YIG catalytic domain LNQ37_010005 PF02151 UvrB/uvrC motif LNQ37_010005 PF08459 UvrC Helix-hairpin-helix N-terminal LNQ37_010010 PF00196 Bacterial regulatory proteins, luxR family LNQ37_010010 PF00072 Response regulator receiver domain LNQ37_010015 PF10769 Protein of unknown function (DUF2594) LNQ37_010035 PF00324 Amino acid permease LNQ37_010040 PF01276 Orn/Lys/Arg decarboxylase, major domain LNQ37_010040 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNQ37_010040 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNQ37_010045 PF13520 Amino acid permease LNQ37_010050 PF00486 Transcriptional regulatory protein, C terminal LNQ37_010050 PF18500 CadC C-terminal domain 1 LNQ37_010055 PF00474 Sodium:solute symporter family LNQ37_010060 PF00171 Aldehyde dehydrogenase family LNQ37_010060 PF01619 Proline dehydrogenase LNQ37_010060 PF14850 DNA-binding domain of Proline dehydrogenase LNQ37_010060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LNQ37_010065 PF00005 ABC transporter LNQ37_010070 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_010075 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_010080 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_010085 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_010090 PF04542 Sigma-70 region 2 LNQ37_010090 PF04545 Sigma-70, region 4 LNQ37_010090 PF04539 Sigma-70 region 3 LNQ37_010095 PF00700 Bacterial flagellin C-terminal helical region LNQ37_010095 PF08884 Flagellin D3 domain LNQ37_010095 PF00669 Bacterial flagellin N-terminal helical region LNQ37_010100 PF00700 Bacterial flagellin C-terminal helical region LNQ37_010100 PF00669 Bacterial flagellin N-terminal helical region LNQ37_010100 PF08884 Flagellin D3 domain LNQ37_010105 PF00700 Bacterial flagellin C-terminal helical region LNQ37_010105 PF08884 Flagellin D3 domain LNQ37_010105 PF00669 Bacterial flagellin N-terminal helical region LNQ37_010110 PF07195 Flagellar hook-associated protein 2 C-terminus LNQ37_010110 PF07196 Flagellin hook IN motif LNQ37_010110 PF02465 Flagellar hook-associated protein 2 N-terminus LNQ37_010115 PF02561 Flagellar protein FliS LNQ37_010120 PF05400 Flagellar protein FliT LNQ37_010125 PF12833 Helix-turn-helix domain LNQ37_010130 PF01966 HD domain LNQ37_010135 PF07885 Ion channel LNQ37_010135 PF02254 TrkA-N domain LNQ37_010140 PF01223 DNA/RNA non-specific endonuclease LNQ37_010150 PF02049 Flagellar hook-basal body complex protein FliE LNQ37_010155 PF01514 Secretory protein of YscJ/FliF family LNQ37_010155 PF08345 Flagellar M-ring protein C-terminal LNQ37_010160 PF14842 FliG N-terminal domain LNQ37_010160 PF14841 FliG middle domain LNQ37_010160 PF01706 FliG C-terminal domain LNQ37_010165 PF02108 Flagellar assembly protein FliH LNQ37_010170 PF18269 T3SS EscN ATPase C-terminal domain LNQ37_010170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ37_010175 PF02050 Flagellar FliJ protein LNQ37_010180 PF02120 Flagellar hook-length control protein FliK LNQ37_010185 PF03748 Flagellar basal body-associated protein FliL LNQ37_010190 PF02154 Flagellar motor switch protein FliM LNQ37_010190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ37_010195 PF16973 Flagellar motor switch protein FliN N-terminal LNQ37_010195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNQ37_010200 PF04347 Flagellar biosynthesis protein, FliO LNQ37_010205 PF00813 FliP family LNQ37_010210 PF01313 Bacterial export proteins, family 3 LNQ37_010215 PF01311 Bacterial export proteins, family 1 LNQ37_010220 PF00669 Bacterial flagellin N-terminal helical region LNQ37_010225 PF00460 Flagella basal body rod protein LNQ37_010225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ37_010230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LNQ37_010230 PF10135 Rod binding protein LNQ37_010235 PF02119 Flagellar P-ring protein LNQ37_010240 PF02107 Flagellar L-ring protein LNQ37_010245 PF00460 Flagella basal body rod protein LNQ37_010245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ37_010250 PF00460 Flagella basal body rod protein LNQ37_010250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ37_010255 PF07559 Flagellar basal body protein FlaE LNQ37_010255 PF00460 Flagella basal body rod protein LNQ37_010255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ37_010260 PF03963 Flagellar hook capping protein - N-terminal region LNQ37_010260 PF13860 FlgD Ig-like domain LNQ37_010260 PF13861 FlgD Tudor-like domain LNQ37_010265 PF00460 Flagella basal body rod protein LNQ37_010265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNQ37_010270 PF00460 Flagella basal body rod protein LNQ37_010275 PF17656 FlgA N-terminal domain LNQ37_010275 PF13144 Chaperone for flagella basal body P-ring formation LNQ37_010280 PF04316 Anti-sigma-28 factor, FlgM LNQ37_010285 PF05130 FlgN protein LNQ37_010290 PF06366 Flagellar protein FlhE LNQ37_010295 PF00771 FHIPEP family LNQ37_010300 PF01312 FlhB HrpN YscU SpaS Family LNQ37_010305 PF00082 Subtilase family LNQ37_010305 PF01483 Proprotein convertase P-domain LNQ37_010310 PF00196 Bacterial regulatory proteins, luxR family LNQ37_010320 PF00419 Fimbrial protein LNQ37_010330 PF13954 PapC N-terminal domain LNQ37_010330 PF13953 PapC C-terminal domain LNQ37_010330 PF00577 Outer membrane usher protein LNQ37_010335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_010335 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_010345 PF00419 Fimbrial protein LNQ37_010370 PF04344 Chemotaxis phosphatase, CheZ LNQ37_010375 PF00072 Response regulator receiver domain LNQ37_010380 PF00072 Response regulator receiver domain LNQ37_010380 PF01339 CheB methylesterase LNQ37_010385 PF03705 CheR methyltransferase, all-alpha domain LNQ37_010385 PF01739 CheR methyltransferase, SAM binding domain LNQ37_010390 PF00672 HAMP domain LNQ37_010390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_010390 PF02203 Tar ligand binding domain homologue LNQ37_010395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_010395 PF00672 HAMP domain LNQ37_010395 PF02203 Tar ligand binding domain homologue LNQ37_010400 PF01584 CheW-like domain LNQ37_010405 PF02895 Signal transducing histidine kinase, homodimeric domain LNQ37_010405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_010405 PF01627 Hpt domain LNQ37_010405 PF01584 CheW-like domain LNQ37_010405 PF09078 CheY binding LNQ37_010410 PF13677 Membrane MotB of proton-channel complex MotA/MotB LNQ37_010410 PF00691 OmpA family LNQ37_010415 PF01618 MotA/TolQ/ExbB proton channel family LNQ37_010420 PF05280 Flagellar transcriptional activator (FlhC) LNQ37_010425 PF05247 Flagellar transcriptional activator (FlhD) LNQ37_010430 PF00582 Universal stress protein family LNQ37_010440 PF02308 MgtC family LNQ37_010445 PF02203 Tar ligand binding domain homologue LNQ37_010445 PF00672 HAMP domain LNQ37_010445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_010450 PF10781 Dextransucrase DSRB LNQ37_010455 PF00313 'Cold-shock' DNA-binding domain LNQ37_010465 PF00356 Bacterial regulatory proteins, lacI family LNQ37_010470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LNQ37_010470 PF02929 Beta galactosidase small chain LNQ37_010470 PF00703 Glycosyl hydrolases family 2 LNQ37_010470 PF16353 Domain of unknown function(DUF4981) LNQ37_010470 PF02837 Glycosyl hydrolases family 2, sugar binding domain LNQ37_010475 PF00698 Acyl transferase domain LNQ37_010475 PF08240 Alcohol dehydrogenase GroES-like domain LNQ37_010475 PF00107 Zinc-binding dehydrogenase LNQ37_010475 PF16197 Ketoacyl-synthetase C-terminal extension LNQ37_010475 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ37_010475 PF08659 KR domain LNQ37_010475 PF00550 Phosphopantetheine attachment site LNQ37_010475 PF14765 Polyketide synthase dehydratase LNQ37_010475 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ37_010480 PF10777 Inner membrane protein YlaC LNQ37_010490 PF14001 YdfZ protein LNQ37_010500 PF06167 Glucose-regulated metallo-peptidase M90 LNQ37_010520 PF01648 4'-phosphopantetheinyl transferase superfamily LNQ37_010520 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LNQ37_010525 PF00939 Sodium:sulfate symporter transmembrane region LNQ37_010530 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LNQ37_010535 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LNQ37_010540 PF04223 Citrate lyase, alpha subunit (CitF) LNQ37_010545 PF03328 HpcH/HpaI aldolase/citrate lyase family LNQ37_010550 PF06857 Malonate decarboxylase delta subunit (MdcD) LNQ37_010555 PF08218 Citrate lyase ligase C-terminal domain LNQ37_010560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_010560 PF00989 PAS fold LNQ37_010560 PF17203 Single cache domain 3 LNQ37_010560 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LNQ37_010565 PF12431 Transcriptional regulator LNQ37_010565 PF00072 Response regulator receiver domain LNQ37_010570 PF00196 Bacterial regulatory proteins, luxR family LNQ37_010570 PF00072 Response regulator receiver domain LNQ37_010575 PF05231 MASE1 LNQ37_010575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_010575 PF07730 Histidine kinase LNQ37_010580 PF07690 Major Facilitator Superfamily LNQ37_010590 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_010595 PF00005 ABC transporter LNQ37_010595 PF08402 TOBE domain LNQ37_010610 PF04363 Protein of unknown function (DUF496) LNQ37_010615 PF04632 Fusaric acid resistance protein family LNQ37_010625 PF08411 Exonuclease C-terminal LNQ37_010625 PF00929 Exonuclease LNQ37_010630 PF13520 Amino acid permease LNQ37_010635 PF00593 TonB dependent receptor LNQ37_010635 PF07715 TonB-dependent Receptor Plug Domain LNQ37_010640 PF00005 ABC transporter LNQ37_010645 PF01032 FecCD transport family LNQ37_010655 PF00324 Amino acid permease LNQ37_010660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_010660 PF03466 LysR substrate binding domain LNQ37_010670 PF03601 Conserved hypothetical protein 698 LNQ37_010675 PF01261 Xylose isomerase-like TIM barrel LNQ37_010680 PF02378 Phosphotransferase system, EIIC LNQ37_010680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNQ37_010685 PF00294 pfkB family carbohydrate kinase LNQ37_010690 PF00381 PTS HPr component phosphorylation site LNQ37_010690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ37_010695 PF00293 NUDIX domain LNQ37_010700 PF03264 NapC/NirT cytochrome c family, N-terminal region LNQ37_010705 PF00384 Molybdopterin oxidoreductase LNQ37_010705 PF18364 Molybdopterin oxidoreductase N-terminal domain LNQ37_010705 PF01568 Molydopterin dinucleotide binding domain LNQ37_010710 PF03692 Putative zinc- or iron-chelating domain LNQ37_010715 PF03222 Tryptophan/tyrosine permease family LNQ37_010720 PF01132 Elongation factor P (EF-P) OB domain LNQ37_010720 PF08207 Elongation factor P (EF-P) KOW-like domain LNQ37_010720 PF09285 Elongation factor P, C-terminal LNQ37_010725 PF03786 D-mannonate dehydratase (UxuA) LNQ37_010730 PF01232 Mannitol dehydrogenase Rossmann domain LNQ37_010730 PF08125 Mannitol dehydrogenase C-terminal domain LNQ37_010740 PF02492 CobW/HypB/UreG, nucleotide-binding domain LNQ37_010740 PF07683 Cobalamin synthesis protein cobW C-terminal domain LNQ37_010745 PF01569 PAP2 superfamily LNQ37_010750 PF00877 NlpC/P60 family LNQ37_010755 PF12792 CSS motif domain associated with EAL LNQ37_010755 PF00563 EAL domain LNQ37_010760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LNQ37_010765 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_010770 PF12911 N-terminal TM domain of oligopeptide transport permease C LNQ37_010770 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_010775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LNQ37_010775 PF00005 ABC transporter LNQ37_010780 PF13989 YejG-like protein LNQ37_010785 PF07690 Major Facilitator Superfamily LNQ37_010790 PF01479 S4 domain LNQ37_010790 PF00849 RNA pseudouridylate synthase LNQ37_010795 PF00271 Helicase conserved C-terminal domain LNQ37_010795 PF04851 Type III restriction enzyme, res subunit LNQ37_010800 PF01386 Ribosomal L25p family LNQ37_010805 PF04245 37-kD nucleoid-associated bacterial protein LNQ37_010810 PF07208 Protein of unknown function (DUF1414) LNQ37_010815 PF00884 Sulfatase LNQ37_010815 PF11893 Domain of unknown function (DUF3413) LNQ37_010830 PF02796 Helix-turn-helix domain of resolvase LNQ37_010830 PF00239 Resolvase, N terminal domain LNQ37_010845 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_010860 PF04865 Baseplate J-like protein LNQ37_010900 PF04984 Phage tail sheath protein subtilisin-like domain LNQ37_010900 PF17482 Phage tail sheath C-terminal domain LNQ37_010940 PF01343 Peptidase family S49 LNQ37_010990 PF00182 Chitinase class I LNQ37_011020 PF06147 Protein of unknown function (DUF968) LNQ37_011040 PF05869 DNA N-6-adenine-methyltransferase (Dam) LNQ37_011045 PF03354 Phage Terminase LNQ37_011090 PF10065 Uncharacterized conserved protein (DUF2303) LNQ37_011115 PF08241 Methyltransferase domain LNQ37_011115 PF12697 Alpha/beta hydrolase family LNQ37_011150 PF06183 DinI-like family LNQ37_011155 PF12706 Beta-lactamase superfamily domain LNQ37_011160 PF00144 Beta-lactamase LNQ37_011165 PF13302 Acetyltransferase (GNAT) domain LNQ37_011180 PF00267 Gram-negative porin LNQ37_011185 PF07690 Major Facilitator Superfamily LNQ37_011190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_011190 PF01627 Hpt domain LNQ37_011190 PF16359 RcsD-ABL domain LNQ37_011195 PF00196 Bacterial regulatory proteins, luxR family LNQ37_011195 PF00072 Response regulator receiver domain LNQ37_011200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_011200 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_011200 PF09456 RcsC Alpha-Beta-Loop (ABL) LNQ37_011200 PF00072 Response regulator receiver domain LNQ37_011205 PF00521 DNA gyrase/topoisomerase IV, subunit A LNQ37_011205 PF03989 DNA gyrase C-terminal domain, beta-propeller LNQ37_011215 PF03477 ATP cone domain LNQ37_011215 PF02867 Ribonucleotide reductase, barrel domain LNQ37_011215 PF00317 Ribonucleotide reductase, all-alpha domain LNQ37_011220 PF00268 Ribonucleotide reductase, small chain LNQ37_011225 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ37_011235 PF03974 Ecotin LNQ37_011240 PF00994 Probable molybdopterin binding domain LNQ37_011245 PF04138 GtrA-like protein LNQ37_011250 PF00535 Glycosyl transferase family 2 LNQ37_011260 PF03222 Tryptophan/tyrosine permease family LNQ37_011265 PF07437 YfaZ precursor LNQ37_011270 PF00199 Catalase LNQ37_011270 PF06628 Catalase-related immune-responsive LNQ37_011275 PF13193 AMP-binding enzyme C-terminal domain LNQ37_011275 PF00501 AMP-binding enzyme LNQ37_011280 PF13378 Enolase C-terminal domain-like LNQ37_011285 PF00378 Enoyl-CoA hydratase/isomerase LNQ37_011290 PF12697 Alpha/beta hydrolase family LNQ37_011295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ37_011295 PF16582 Middle domain of thiamine pyrophosphate LNQ37_011295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ37_011300 PF00425 chorismate binding enzyme LNQ37_011305 PF05957 Bacterial protein of unknown function (DUF883) LNQ37_011310 PF06496 Protein of unknown function (DUF1097) LNQ37_011315 PF00361 Proton-conducting membrane transporter LNQ37_011320 PF00361 Proton-conducting membrane transporter LNQ37_011325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LNQ37_011325 PF00361 Proton-conducting membrane transporter LNQ37_011330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LNQ37_011335 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LNQ37_011340 PF12838 4Fe-4S dicluster domain LNQ37_011345 PF00146 NADH dehydrogenase LNQ37_011350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ37_011350 PF00384 Molybdopterin oxidoreductase LNQ37_011350 PF01568 Molydopterin dinucleotide binding domain LNQ37_011350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LNQ37_011355 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LNQ37_011355 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LNQ37_011355 PF10531 SLBB domain LNQ37_011365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LNQ37_011365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LNQ37_011370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LNQ37_011375 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LNQ37_011380 PF03466 LysR substrate binding domain LNQ37_011380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_011385 PF00155 Aminotransferase class I and II LNQ37_011395 PF03600 Citrate transporter LNQ37_011395 PF02080 TrkA-C domain LNQ37_011405 PF03887 YfbU domain LNQ37_011410 PF04217 Protein of unknown function, DUF412 LNQ37_011415 PF00871 Acetokinase family LNQ37_011420 PF07085 DRTGG domain LNQ37_011420 PF01515 Phosphate acetyl/butaryl transferase LNQ37_011425 PF00356 Bacterial regulatory proteins, lacI family LNQ37_011425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LNQ37_011430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ37_011440 PF03611 PTS system sugar-specific permease component LNQ37_011445 PF00293 NUDIX domain LNQ37_011450 PF12850 Calcineurin-like phosphoesterase superfamily domain LNQ37_011460 PF00043 Glutathione S-transferase, C-terminal domain LNQ37_011460 PF02798 Glutathione S-transferase, N-terminal domain LNQ37_011465 PF08338 Domain of unknown function (DUF1731) LNQ37_011465 PF01370 NAD dependent epimerase/dehydratase family LNQ37_011470 PF00005 ABC transporter LNQ37_011475 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_011480 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_011485 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_011495 PF02441 Flavoprotein LNQ37_011500 PF00156 Phosphoribosyl transferase domain LNQ37_011505 PF02674 Colicin V production protein LNQ37_011510 PF05036 Sporulation related domain LNQ37_011515 PF02875 Mur ligase family, glutamate ligase domain LNQ37_011515 PF08245 Mur ligase middle domain LNQ37_011520 PF01039 Carboxyl transferase domain LNQ37_011520 PF17848 Acetyl-coA carboxylase zinc finger domain LNQ37_011525 PF09335 SNARE associated Golgi protein LNQ37_011530 PF01416 tRNA pseudouridine synthase LNQ37_011535 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ37_011535 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ37_011540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ37_011540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ37_011540 PF11890 Domain of unknown function (DUF3410) LNQ37_011560 PF00155 Aminotransferase class I and II LNQ37_011565 PF00578 AhpC/TSA family LNQ37_011595 PF00109 Beta-ketoacyl synthase, N-terminal domain LNQ37_011595 PF02801 Beta-ketoacyl synthase, C-terminal domain LNQ37_011600 PF01266 FAD dependent oxidoreductase LNQ37_011600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LNQ37_011605 PF08891 YfcL protein LNQ37_011610 PF04315 Elongation factor P hydroxylase LNQ37_011615 PF01925 Sulfite exporter TauE/SafE LNQ37_011620 PF03411 Penicillin-insensitive murein endopeptidase LNQ37_011625 PF01264 Chorismate synthase LNQ37_011630 PF05175 Methyltransferase small domain LNQ37_011635 PF01713 Smr domain LNQ37_011640 PF00300 Histidine phosphatase superfamily (branch 1) LNQ37_011645 PF00378 Enoyl-CoA hydratase/isomerase LNQ37_011645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNQ37_011645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNQ37_011650 PF02803 Thiolase, C-terminal domain LNQ37_011650 PF00108 Thiolase, N-terminal domain LNQ37_011655 PF04175 Protein of unknown function (DUF406) LNQ37_011660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LNQ37_011665 PF04333 MlaA lipoprotein LNQ37_011670 PF03918 Cytochrome C biogenesis protein LNQ37_011675 PF03918 Cytochrome C biogenesis protein LNQ37_011680 PF08534 Redoxin LNQ37_011685 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LNQ37_011685 PF01578 Cytochrome C assembly protein LNQ37_011690 PF03100 CcmE LNQ37_011695 PF04995 Heme exporter protein D (CcmD) LNQ37_011700 PF01578 Cytochrome C assembly protein LNQ37_011705 PF03379 CcmB protein LNQ37_011710 PF00005 ABC transporter LNQ37_011725 PF03831 PhnA domain LNQ37_011725 PF08274 PhnA Zinc-Ribbon LNQ37_011730 PF13406 Transglycosylase SLT domain LNQ37_011745 PF01292 Prokaryotic cytochrome b561 LNQ37_011750 PF00155 Aminotransferase class I and II LNQ37_011755 PF07350 Protein of unknown function (DUF1479) LNQ37_011760 PF07694 5TMR of 5TMR-LYT LNQ37_011760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_011760 PF06580 Histidine kinase LNQ37_011765 PF04397 LytTr DNA-binding domain LNQ37_011765 PF00072 Response regulator receiver domain LNQ37_011770 PF07690 Major Facilitator Superfamily LNQ37_011775 PF02685 Glucokinase LNQ37_011785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_011785 PF03466 LysR substrate binding domain LNQ37_011795 PF01566 Natural resistance-associated macrophage protein LNQ37_011800 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ37_011800 PF07670 Nucleoside recognition LNQ37_011800 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ37_011845 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNQ37_011870 PF12843 Putative quorum-sensing-regulated virulence factor LNQ37_011875 PF00533 BRCA1 C Terminus (BRCT) domain LNQ37_011875 PF01653 NAD-dependent DNA ligase adenylation domain LNQ37_011875 PF03120 NAD-dependent DNA ligase OB-fold domain LNQ37_011875 PF12826 Helix-hairpin-helix motif LNQ37_011875 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LNQ37_011880 PF04354 ZipA, C-terminal FtsZ-binding domain LNQ37_011890 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_011895 PF00381 PTS HPr component phosphorylation site LNQ37_011900 PF00391 PEP-utilising enzyme, mobile domain LNQ37_011900 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ37_011900 PF05524 PEP-utilising enzyme, N-terminal LNQ37_011905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LNQ37_011910 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_011915 PF00005 ABC transporter LNQ37_011920 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_011925 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_011935 PF07690 Major Facilitator Superfamily LNQ37_011940 PF01380 SIS domain LNQ37_011940 PF01418 Helix-turn-helix domain, rpiR family LNQ37_011945 PF04074 YhcH/YjgK/YiaL LNQ37_011950 PF00480 ROK family LNQ37_011955 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LNQ37_011960 PF00701 Dihydrodipicolinate synthetase family LNQ37_011965 PF04261 Dyp-type peroxidase family LNQ37_011970 PF06572 Protein of unknown function (DUF1131) LNQ37_011975 PF04076 Bacterial OB fold (BOF) protein LNQ37_011980 PF00583 Acetyltransferase (GNAT) family LNQ37_011985 PF01218 Coproporphyrinogen III oxidase LNQ37_011990 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LNQ37_011995 PF00390 Malic enzyme, N-terminal domain LNQ37_011995 PF03949 Malic enzyme, NAD binding domain LNQ37_011995 PF01515 Phosphate acetyl/butaryl transferase LNQ37_012000 PF00293 NUDIX domain LNQ37_012005 PF03264 NapC/NirT cytochrome c family, N-terminal region LNQ37_012010 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LNQ37_012015 PF01568 Molydopterin dinucleotide binding domain LNQ37_012015 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNQ37_012015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LNQ37_012015 PF00384 Molybdopterin oxidoreductase LNQ37_012020 PF03927 NapD protein LNQ37_012025 PF00037 4Fe-4S binding domain LNQ37_012025 PF12800 4Fe-4S binding domain LNQ37_012025 PF13187 4Fe-4S dicluster domain LNQ37_012030 PF00196 Bacterial regulatory proteins, luxR family LNQ37_012030 PF00072 Response regulator receiver domain LNQ37_012040 PF00873 AcrB/AcrD/AcrF family LNQ37_012050 PF01817 Chorismate mutase type II LNQ37_012055 PF03960 ArsC family LNQ37_012060 PF01546 Peptidase family M20/M25/M40 LNQ37_012060 PF07687 Peptidase dimerisation domain LNQ37_012065 PF02557 D-alanyl-D-alanine carboxypeptidase LNQ37_012070 PF13980 Uncharacterised protein family (UPF0370) LNQ37_012075 PF02230 Phospholipase/Carboxylesterase LNQ37_012080 PF08351 Domain of unknown function (DUF1726) LNQ37_012080 PF13718 GNAT acetyltransferase 2 LNQ37_012080 PF05127 Helicase LNQ37_012080 PF17176 tRNA-binding domain LNQ37_012085 PF04284 Protein of unknown function (DUF441) LNQ37_012090 PF01259 SAICAR synthetase LNQ37_012095 PF06804 NlpB/DapX lipoprotein LNQ37_012100 PF00701 Dihydrodipicolinate synthetase family LNQ37_012105 PF01842 ACT domain LNQ37_012110 PF00578 AhpC/TSA family LNQ37_012115 PF01594 AI-2E family transporter LNQ37_012120 PF01435 Peptidase family M48 LNQ37_012120 PF07720 Tetratricopeptide repeat LNQ37_012125 PF03960 ArsC family LNQ37_012130 PF00308 Bacterial dnaA protein LNQ37_012135 PF00860 Permease family LNQ37_012145 PF02769 AIR synthase related protein, C-terminal domain LNQ37_012145 PF00586 AIR synthase related protein, N-terminal domain LNQ37_012150 PF00551 Formyl transferase LNQ37_012155 PF13302 Acetyltransferase (GNAT) domain LNQ37_012160 PF00005 ABC transporter LNQ37_012165 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_012170 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_012175 PF02503 Polyphosphate kinase middle domain LNQ37_012175 PF13090 Polyphosphate kinase C-terminal domain 2 LNQ37_012175 PF17941 Polyphosphate kinase C-terminal domain 1 LNQ37_012175 PF13089 Polyphosphate kinase N-terminal domain LNQ37_012180 PF02541 Ppx/GppA phosphatase family LNQ37_012190 PF00571 CBS domain LNQ37_012190 PF03448 MgtE intracellular N domain LNQ37_012190 PF01769 Divalent cation transporter LNQ37_012195 PF00012 Hsp70 protein LNQ37_012205 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_012205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_012210 PF13953 PapC C-terminal domain LNQ37_012210 PF13954 PapC N-terminal domain LNQ37_012210 PF00577 Outer membrane usher protein LNQ37_012225 PF13533 Biotin-lipoyl like LNQ37_012230 PF00873 AcrB/AcrD/AcrF family LNQ37_012235 PF00873 AcrB/AcrD/AcrF family LNQ37_012240 PF07690 Major Facilitator Superfamily LNQ37_012245 PF00672 HAMP domain LNQ37_012245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_012245 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_012250 PF00072 Response regulator receiver domain LNQ37_012250 PF00486 Transcriptional regulatory protein, C terminal LNQ37_012255 PF07411 Domain of unknown function (DUF1508) LNQ37_012260 PF16325 Peptidase family U32 C-terminal domain LNQ37_012260 PF01136 Peptidase family U32 LNQ37_012265 PF00781 Diacylglycerol kinase catalytic domain LNQ37_012280 PF08543 Phosphomethylpyrimidine kinase LNQ37_012290 PF00117 Glutamine amidotransferase class-I LNQ37_012290 PF00958 GMP synthase C terminal domain LNQ37_012290 PF02540 NAD synthase LNQ37_012295 PF00571 CBS domain LNQ37_012295 PF00478 IMP dehydrogenase / GMP reductase domain LNQ37_012300 PF13742 OB-fold nucleic acid binding domain LNQ37_012300 PF02601 Exonuclease VII, large subunit LNQ37_012305 PF07191 zinc-ribbons LNQ37_012310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LNQ37_012310 PF01926 50S ribosome-binding GTPase LNQ37_012315 PF13360 PQQ-like domain LNQ37_012320 PF09976 Tetratricopeptide repeat-like domain LNQ37_012325 PF03129 Anticodon binding domain LNQ37_012325 PF13393 Histidyl-tRNA synthetase LNQ37_012330 PF04551 GcpE protein LNQ37_012335 PF13464 Domain of unknown function (DUF4115) LNQ37_012345 PF04055 Radical SAM superfamily LNQ37_012350 PF00334 Nucleoside diphosphate kinase LNQ37_012360 PF00912 Transglycosylase LNQ37_012360 PF06832 Penicillin-Binding Protein C-terminus Family LNQ37_012360 PF00905 Penicillin binding protein transpeptidase domain LNQ37_012365 PF00207 Alpha-2-macroglobulin family LNQ37_012365 PF07703 Alpha-2-macroglobulin bait region domain LNQ37_012365 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LNQ37_012365 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LNQ37_012365 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LNQ37_012365 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LNQ37_012365 PF17962 Bacterial macroglobulin domain 6 LNQ37_012365 PF01835 MG2 domain LNQ37_012365 PF07678 A-macroglobulin TED domain LNQ37_012370 PF07179 SseB protein N-terminal domain LNQ37_012370 PF14581 SseB protein C-terminal domain LNQ37_012375 PF12404 Peptidase LNQ37_012375 PF00883 Cytosol aminopeptidase family, catalytic domain LNQ37_012380 PF04384 Iron-sulphur cluster assembly LNQ37_012385 PF00111 2Fe-2S iron-sulfur cluster binding domain LNQ37_012390 PF00012 Hsp70 protein LNQ37_012395 PF07743 HSCB C-terminal oligomerisation domain LNQ37_012395 PF00226 DnaJ domain LNQ37_012400 PF01521 Iron-sulphur cluster biosynthesis LNQ37_012405 PF01592 NifU-like N terminal domain LNQ37_012410 PF00266 Aminotransferase class-V LNQ37_012415 PF02082 Transcriptional regulator LNQ37_012420 PF00588 SpoU rRNA Methylase family LNQ37_012425 PF00459 Inositol monophosphatase family LNQ37_012430 PF03824 High-affinity nickel-transport protein LNQ37_012435 PF06226 Protein of unknown function (DUF1007) LNQ37_012440 PF00874 PRD domain LNQ37_012445 PF12832 MFS_1 like family LNQ37_012450 PF00464 Serine hydroxymethyltransferase LNQ37_012455 PF00175 Oxidoreductase NAD-binding domain LNQ37_012455 PF00042 Globin LNQ37_012455 PF00970 Oxidoreductase FAD-binding domain LNQ37_012460 PF14502 Helix-turn-helix domain LNQ37_012460 PF14503 YhfZ C-terminal domain LNQ37_012470 PF01168 Alanine racemase, N-terminal domain LNQ37_012475 PF02126 Phosphotriesterase family LNQ37_012480 PF10941 Protein of unknown function DUF2620 LNQ37_012485 PF10797 Protein of unknown function LNQ37_012490 PF00543 Nitrogen regulatory protein P-II LNQ37_012495 PF00795 Carbon-nitrogen hydrolase LNQ37_012495 PF02540 NAD synthase LNQ37_012500 PF00072 Response regulator receiver domain LNQ37_012500 PF00158 Sigma-54 interaction domain LNQ37_012505 PF13942 YfhG lipoprotein LNQ37_012510 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_012510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_012520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LNQ37_012520 PF02769 AIR synthase related protein, C-terminal domain LNQ37_012520 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LNQ37_012525 PF01464 Transglycosylase SLT domain LNQ37_012525 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_012530 PF14437 MafB19-like deaminase LNQ37_012540 PF00367 phosphotransferase system, EIIB LNQ37_012540 PF02378 Phosphotransferase system, EIIC LNQ37_012545 PF01380 SIS domain LNQ37_012550 PF01418 Helix-turn-helix domain, rpiR family LNQ37_012550 PF01380 SIS domain LNQ37_012555 PF12838 4Fe-4S dicluster domain LNQ37_012560 PF01648 4'-phosphopantetheinyl transferase superfamily LNQ37_012565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LNQ37_012570 PF02565 Recombination protein O C terminal LNQ37_012570 PF11967 Recombination protein O N terminal LNQ37_012575 PF07650 KH domain LNQ37_012575 PF01926 50S ribosome-binding GTPase LNQ37_012580 PF14622 Ribonuclease-III-like LNQ37_012580 PF00035 Double-stranded RNA binding motif LNQ37_012585 PF10502 Signal peptidase, peptidase S26 LNQ37_012590 PF03144 Elongation factor Tu domain 2 LNQ37_012590 PF06421 GTP-binding protein LepA C-terminus LNQ37_012590 PF00009 Elongation factor Tu GTP binding domain LNQ37_012590 PF00679 Elongation factor G C-terminus LNQ37_012600 PF03888 MucB/RseB N-terminal domain LNQ37_012600 PF17188 MucB/RseB C-terminal domain LNQ37_012605 PF03873 Anti sigma-E protein RseA, C-terminal domain LNQ37_012605 PF03872 Anti sigma-E protein RseA, N-terminal domain LNQ37_012610 PF04542 Sigma-70 region 2 LNQ37_012610 PF08281 Sigma-70, region 4 LNQ37_012615 PF00890 FAD binding domain LNQ37_012615 PF02910 Fumarate reductase flavoprotein C-term LNQ37_012620 PF05175 Methyltransferase small domain LNQ37_012625 PF00270 DEAD/DEAH box helicase LNQ37_012625 PF00271 Helicase conserved C-terminal domain LNQ37_012630 PF12796 Ankyrin repeats (3 copies) LNQ37_012640 PF01228 Glycine radical LNQ37_012645 PF03167 Uracil DNA glycosylase superfamily LNQ37_012650 PF01025 GrpE LNQ37_012655 PF01513 ATP-NAD kinase LNQ37_012660 PF02463 RecF/RecN/SMC N terminal domain LNQ37_012665 PF04355 SmpA / OmlA family LNQ37_012670 PF03658 RnfH family Ubiquitin LNQ37_012675 PF03364 Polyketide cyclase / dehydrase and lipid transport LNQ37_012680 PF01668 SmpB protein LNQ37_012710 PF00239 Resolvase, N terminal domain LNQ37_012710 PF02796 Helix-turn-helix domain of resolvase LNQ37_012720 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_012725 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LNQ37_012740 PF04865 Baseplate J-like protein LNQ37_012780 PF04984 Phage tail sheath protein subtilisin-like domain LNQ37_012780 PF17482 Phage tail sheath C-terminal domain LNQ37_012820 PF01343 Peptidase family S49 LNQ37_012865 PF13539 D-alanyl-D-alanine carboxypeptidase LNQ37_012915 PF03796 DnaB-like helicase C terminal domain LNQ37_012915 PF00772 DnaB-like helicase N terminal domain LNQ37_012920 PF01695 IstB-like ATP binding protein LNQ37_012935 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT LNQ37_012940 PF01381 Helix-turn-helix LNQ37_012940 PF00717 Peptidase S24-like LNQ37_013025 PF01726 LexA DNA binding domain LNQ37_013025 PF00717 Peptidase S24-like LNQ37_013035 PF12167 Arm DNA-binding domain LNQ37_013035 PF00589 Phage integrase family LNQ37_013040 PF13356 Arm DNA-binding domain LNQ37_013040 PF00589 Phage integrase family LNQ37_013050 PF13361 UvrD-like helicase C-terminal domain LNQ37_013050 PF00580 UvrD/REP helicase N-terminal domain LNQ37_013090 PF01420 Type I restriction modification DNA specificity domain LNQ37_013095 PF02384 N-6 DNA Methylase LNQ37_013105 PF13476 AAA domain LNQ37_013110 PF01926 50S ribosome-binding GTPase LNQ37_013115 PF06067 Domain of unknown function (DUF932) LNQ37_013120 PF08220 DeoR-like helix-turn-helix domain LNQ37_013120 PF13280 WYL domain LNQ37_013135 PF06006 Bacterial protein of unknown function (DUF905) LNQ37_013140 PF03230 Antirestriction protein LNQ37_013145 PF04002 RadC-like JAB domain LNQ37_013150 PF06174 Protein of unknown function (DUF987) LNQ37_013155 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LNQ37_013160 PF06755 CbtA_toxin of type IV toxin-antitoxin system LNQ37_013185 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_013185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_013190 PF13953 PapC C-terminal domain LNQ37_013190 PF13954 PapC N-terminal domain LNQ37_013190 PF00577 Outer membrane usher protein LNQ37_013215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_013215 PF03466 LysR substrate binding domain LNQ37_013230 PF01527 Transposase LNQ37_013240 PF18413 Neuraminidase-like domain LNQ37_013240 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LNQ37_013240 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LNQ37_013240 PF18413 Neuraminidase-like domain LNQ37_013250 PF12256 Insecticide toxin TcdB middle/N-terminal region LNQ37_013250 PF12255 Insecticide toxin TcdB middle/C-terminal region LNQ37_013250 PF03534 Salmonella virulence plasmid 65kDa B protein LNQ37_013255 PF14431 YwqJ-like deaminase LNQ37_013255 PF18807 Tripartite Tc toxins repeat LNQ37_013285 PF01380 SIS domain LNQ37_013285 PF00571 CBS domain LNQ37_013290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNQ37_013290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNQ37_013300 PF02653 Branched-chain amino acid transport system / permease component LNQ37_013305 PF00005 ABC transporter LNQ37_013315 PF00561 alpha/beta hydrolase fold LNQ37_013320 PF03466 LysR substrate binding domain LNQ37_013320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_013325 PF02652 L-lactate permease LNQ37_013330 PF01070 FMN-dependent dehydrogenase LNQ37_013335 PF06039 Malate:quinone oxidoreductase (Mqo) LNQ37_013340 PF00313 'Cold-shock' DNA-binding domain LNQ37_013350 PF06711 Protein of unknown function (DUF1198) LNQ37_013355 PF09400 Protein of unknown function (DUF2002) LNQ37_013370 PF07972 NrdI Flavodoxin like LNQ37_013375 PF02867 Ribonucleotide reductase, barrel domain LNQ37_013375 PF00317 Ribonucleotide reductase, all-alpha domain LNQ37_013375 PF08343 Ribonucleotide reductase N-terminal LNQ37_013380 PF00268 Ribonucleotide reductase, small chain LNQ37_013385 PF00571 CBS domain LNQ37_013385 PF00005 ABC transporter LNQ37_013390 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_013395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LNQ37_013405 PF07690 Major Facilitator Superfamily LNQ37_013410 PF01047 MarR family LNQ37_013420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNQ37_013420 PF00529 HlyD membrane-fusion protein of T1SS LNQ37_013425 PF07690 Major Facilitator Superfamily LNQ37_013430 PF00588 SpoU rRNA Methylase family LNQ37_013430 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNQ37_013435 PF00085 Thioredoxin LNQ37_013440 PF03942 DTW domain LNQ37_013445 PF13380 CoA binding domain LNQ37_013445 PF00583 Acetyltransferase (GNAT) family LNQ37_013445 PF13607 Succinyl-CoA ligase like flavodoxin domain LNQ37_013450 PF13091 PLD-like domain LNQ37_013455 PF10043 Predicted periplasmic lipoprotein (DUF2279) LNQ37_013485 PF00005 ABC transporter LNQ37_013485 PF09383 NIL domain LNQ37_013490 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_013495 PF03180 NLPA lipoprotein LNQ37_013500 PF16358 RcsF lipoprotein LNQ37_013505 PF01980 tRNA-methyltransferase O LNQ37_013505 PF18389 TrmO C-terminal domain LNQ37_013510 PF03129 Anticodon binding domain LNQ37_013510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNQ37_013510 PF04073 Aminoacyl-tRNA editing domain LNQ37_013515 PF04170 NlpE N-terminal domain LNQ37_013515 PF17185 NlpE C-terminal OB domain LNQ37_013520 PF00472 RF-1 domain LNQ37_013525 PF07152 YaeQ protein LNQ37_013530 PF06786 Uncharacterised protein family (UPF0253) LNQ37_013535 PF07073 Modulator of Rho-dependent transcription termination (ROF) LNQ37_013540 PF00034 Cytochrome c LNQ37_013545 PF01171 PP-loop family LNQ37_013545 PF09179 TilS substrate binding domain LNQ37_013545 PF11734 TilS substrate C-terminal domain LNQ37_013550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNQ37_013565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LNQ37_013570 PF07733 Bacterial DNA polymerase III alpha NTPase domain LNQ37_013570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LNQ37_013570 PF02811 PHP domain LNQ37_013570 PF01336 OB-fold nucleic acid binding domain LNQ37_013570 PF14579 Helix-hairpin-helix motif LNQ37_013575 PF01351 Ribonuclease HII LNQ37_013580 PF02684 Lipid-A-disaccharide synthetase LNQ37_013585 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_013585 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LNQ37_013590 PF07977 FabA-like domain LNQ37_013595 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LNQ37_013595 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_013600 PF03938 Outer membrane protein (OmpH-like) LNQ37_013605 PF01103 Surface antigen LNQ37_013605 PF07244 Surface antigen variable number repeat LNQ37_013610 PF17820 PDZ domain LNQ37_013610 PF02163 Peptidase family M50 LNQ37_013620 PF01255 Putative undecaprenyl diphosphate synthase LNQ37_013625 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LNQ37_013625 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LNQ37_013625 PF13288 DXP reductoisomerase C-terminal domain LNQ37_013630 PF01765 Ribosome recycling factor LNQ37_013635 PF00696 Amino acid kinase family LNQ37_013640 PF00889 Elongation factor TS LNQ37_013645 PF00318 Ribosomal protein S2 LNQ37_013650 PF00557 Metallopeptidase family M24 LNQ37_013655 PF01909 Nucleotidyltransferase domain LNQ37_013655 PF01842 ACT domain LNQ37_013655 PF08335 GlnD PII-uridylyltransferase LNQ37_013655 PF01966 HD domain LNQ37_013660 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_013660 PF14602 Hexapeptide repeat of succinyl-transferase LNQ37_013660 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LNQ37_013665 PF11944 Protein of unknown function (DUF3461) LNQ37_013670 PF00258 Flavodoxin LNQ37_013675 PF00849 RNA pseudouridylate synthase LNQ37_013680 PF04287 tRNA pseudouridine synthase C LNQ37_013685 PF07348 Syd protein (SUKH-2) LNQ37_013690 PF14489 QueF-like protein LNQ37_013690 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LNQ37_013695 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LNQ37_013695 PF03641 Possible lysine decarboxylase LNQ37_013695 PF11892 Domain of unknown function (DUF3412) LNQ37_013700 PF01367 5'-3' exonuclease, C-terminal SAM fold LNQ37_013700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNQ37_013705 PF01728 FtsJ-like methyltransferase LNQ37_013705 PF18125 RlmM ferredoxin-like domain LNQ37_013710 PF04241 Protein of unknown function (DUF423) LNQ37_013715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_013715 PF03466 LysR substrate binding domain LNQ37_013720 PF06004 Bacterial protein of unknown function (DUF903) LNQ37_013725 PF00266 Aminotransferase class-V LNQ37_013730 PF02657 Fe-S metabolism associated domain LNQ37_013735 PF00899 ThiF family LNQ37_013740 PF06725 3D domain LNQ37_013740 PF03562 MltA specific insert domain LNQ37_013760 PF01520 N-acetylmuramoyl-L-alanine amidase LNQ37_013760 PF11741 AMIN domain LNQ37_013765 PF00696 Amino acid kinase family LNQ37_013765 PF00583 Acetyltransferase (GNAT) family LNQ37_013770 PF13538 UvrD-like helicase C-terminal domain LNQ37_013775 PF12705 PD-(D/E)XK nuclease superfamily LNQ37_013775 PF00580 UvrD/REP helicase N-terminal domain LNQ37_013775 PF13361 UvrD-like helicase C-terminal domain LNQ37_013780 PF00675 Insulinase (Peptidase family M16) LNQ37_013780 PF05193 Peptidase M16 inactive domain LNQ37_013780 PF16187 Middle or third domain of peptidase_M16 LNQ37_013785 PF17946 RecC C-terminal domain LNQ37_013790 PF07963 Prokaryotic N-terminal methylation motif LNQ37_013790 PF12528 Type II secretion prepilin peptidase dependent protein C LNQ37_013805 PF07963 Prokaryotic N-terminal methylation motif LNQ37_013805 PF00114 Pilin (bacterial filament) LNQ37_013810 PF00303 Thymidylate synthase LNQ37_013815 PF01790 Prolipoprotein diacylglyceryl transferase LNQ37_013820 PF01590 GAF domain LNQ37_013820 PF00391 PEP-utilising enzyme, mobile domain LNQ37_013820 PF02896 PEP-utilising enzyme, TIM barrel domain LNQ37_013820 PF05524 PEP-utilising enzyme, N-terminal LNQ37_013825 PF00293 NUDIX domain LNQ37_013830 PF02976 DNA mismatch repair enzyme MutH LNQ37_013835 PF03741 Integral membrane protein TerC family LNQ37_013840 PF00248 Aldo/keto reductase family LNQ37_013845 PF07690 Major Facilitator Superfamily LNQ37_013850 PF00501 AMP-binding enzyme LNQ37_013850 PF01553 Acyltransferase LNQ37_013850 PF13193 AMP-binding enzyme C-terminal domain LNQ37_013855 PF00356 Bacterial regulatory proteins, lacI family LNQ37_013860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LNQ37_013860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LNQ37_013865 PF03466 LysR substrate binding domain LNQ37_013865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_013870 PF03466 LysR substrate binding domain LNQ37_013870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_013910 PF11612 Type II secretion system (T2SS), protein J LNQ37_013910 PF07963 Prokaryotic N-terminal methylation motif LNQ37_013915 PF02501 Type II secretion system (T2SS), protein I LNQ37_013915 PF07963 Prokaryotic N-terminal methylation motif LNQ37_013925 PF07963 Prokaryotic N-terminal methylation motif LNQ37_013925 PF08334 Type II secretion system (T2SS), protein G LNQ37_013930 PF00482 Type II secretion system (T2SS), protein F LNQ37_013935 PF00482 Type II secretion system (T2SS), protein F LNQ37_013940 PF00437 Type II/IV secretion system protein LNQ37_013945 PF03958 Bacterial type II/III secretion system short domain LNQ37_013945 PF00263 Bacterial type II and III secretion system protein LNQ37_013970 PF00005 ABC transporter LNQ37_013975 PF02405 Permease MlaE LNQ37_013985 PF01336 OB-fold nucleic acid binding domain LNQ37_013985 PF00152 tRNA synthetases class II (D, K and N) LNQ37_013995 PF02272 DHHA1 domain LNQ37_013995 PF17768 RecJ OB domain LNQ37_013995 PF01368 DHH family LNQ37_014000 PF10411 Disulfide bond isomerase protein N-terminus LNQ37_014000 PF13098 Thioredoxin-like domain LNQ37_014005 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_014005 PF00589 Phage integrase family LNQ37_014010 PF00258 Flavodoxin LNQ37_014015 PF07254 Membrane-bound toxin component of toxin-antitoxin system LNQ37_014020 PF03937 Flavinator of succinate dehydrogenase LNQ37_014025 PF01571 Aminomethyltransferase folate-binding domain LNQ37_014030 PF03006 Haemolysin-III related LNQ37_014040 PF02347 Glycine cleavage system P-protein LNQ37_014045 PF01597 Glycine cleavage H-protein LNQ37_014050 PF01571 Aminomethyltransferase folate-binding domain LNQ37_014050 PF08669 Glycine cleavage T-protein C-terminal barrel domain LNQ37_014055 PF01494 FAD binding domain LNQ37_014060 PF01494 FAD binding domain LNQ37_014065 PF05195 Aminopeptidase P, N-terminal domain LNQ37_014065 PF00557 Metallopeptidase family M24 LNQ37_014070 PF03695 Uncharacterised protein family (UPF0149) LNQ37_014075 PF05164 Cell division protein ZapA LNQ37_014085 PF01812 5-formyltetrahydrofolate cyclo-ligase family LNQ37_014090 PF01842 ACT domain LNQ37_014090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNQ37_014090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNQ37_014095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LNQ37_014100 PF03466 LysR substrate binding domain LNQ37_014100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_014105 PF04402 Protein of unknown function (DUF541) LNQ37_014110 PF01810 LysE type translocator LNQ37_014115 PF00924 Mechanosensitive ion channel LNQ37_014115 PF05552 Conserved TM helix LNQ37_014120 PF01116 Fructose-bisphosphate aldolase class-II LNQ37_014125 PF00162 Phosphoglycerate kinase LNQ37_014130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LNQ37_014130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LNQ37_014135 PF02779 Transketolase, pyrimidine binding domain LNQ37_014135 PF02780 Transketolase, C-terminal domain LNQ37_014135 PF00456 Transketolase, thiamine diphosphate binding domain LNQ37_014145 PF17810 Arginine decarboxylase helical bundle domain LNQ37_014145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LNQ37_014145 PF17944 Arginine decarboxylase C-terminal helical extension LNQ37_014150 PF02773 S-adenosylmethionine synthetase, C-terminal domain LNQ37_014150 PF02772 S-adenosylmethionine synthetase, central domain LNQ37_014150 PF00438 S-adenosylmethionine synthetase, N-terminal domain LNQ37_014160 PF04143 Sulphur transport LNQ37_014170 PF10263 SprT-like family LNQ37_014170 PF17283 SprT-like zinc ribbon domain LNQ37_014175 PF04231 Endonuclease I LNQ37_014180 PF04452 RNA methyltransferase LNQ37_014185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LNQ37_014185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LNQ37_014190 PF02622 Uncharacterized ACR, COG1678 LNQ37_014195 PF03652 Holliday junction resolvase LNQ37_014200 PF00795 Carbon-nitrogen hydrolase LNQ37_014205 PF04371 Porphyromonas-type peptidyl-arginine deiminase LNQ37_014210 PF00437 Type II/IV secretion system protein LNQ37_014215 PF01168 Alanine racemase, N-terminal domain LNQ37_014220 PF14748 Pyrroline-5-carboxylate reductase dimerisation LNQ37_014220 PF03807 NADP oxidoreductase coenzyme F420-dependent LNQ37_014225 PF02325 YGGT family LNQ37_014230 PF02594 Uncharacterised ACR, YggU family COG1872 LNQ37_014235 PF01725 Ham1 family LNQ37_014240 PF04055 Radical SAM superfamily LNQ37_014240 PF06969 HemN C-terminal domain LNQ37_014245 PF11101 Protein of unknown function (DUF2884) LNQ37_014250 PF04960 Glutaminase LNQ37_014255 PF04320 Protein with unknown function (DUF469) LNQ37_014260 PF02390 Putative methyltransferase LNQ37_014265 PF10576 Iron-sulfur binding domain of endonuclease III LNQ37_014265 PF00633 Helix-hairpin-helix motif LNQ37_014265 PF00730 HhH-GPD superfamily base excision DNA repair protein LNQ37_014265 PF14815 NUDIX domain LNQ37_014270 PF04362 Bacterial Fe(2+) trafficking LNQ37_014275 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LNQ37_014275 PF01464 Transglycosylase SLT domain LNQ37_014285 PF16456 YmgD protein LNQ37_014295 PF03608 PTS system enzyme II sorbitol-specific factor LNQ37_014300 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LNQ37_014300 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LNQ37_014305 PF03829 PTS system glucitol/sorbitol-specific IIA component LNQ37_014310 PF00106 short chain dehydrogenase LNQ37_014315 PF06923 Glucitol operon activator protein (GutM) LNQ37_014320 PF08220 DeoR-like helix-turn-helix domain LNQ37_014320 PF00455 DeoR C terminal sensor domain LNQ37_014325 PF00571 CBS domain LNQ37_014325 PF01380 SIS domain LNQ37_014330 PF00294 pfkB family carbohydrate kinase LNQ37_014335 PF01228 Glycine radical LNQ37_014335 PF02901 Pyruvate formate lyase-like LNQ37_014340 PF00871 Acetokinase family LNQ37_014345 PF01490 Transmembrane amino acid transporter protein LNQ37_014350 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_014355 PF00975 Thioesterase domain LNQ37_014355 PF00550 Phosphopantetheine attachment site LNQ37_014355 PF00668 Condensation domain LNQ37_014355 PF13193 AMP-binding enzyme C-terminal domain LNQ37_014355 PF00501 AMP-binding enzyme LNQ37_014365 PF00550 Phosphopantetheine attachment site LNQ37_014365 PF00857 Isochorismatase family LNQ37_014370 PF13193 AMP-binding enzyme C-terminal domain LNQ37_014370 PF00501 AMP-binding enzyme LNQ37_014375 PF00425 chorismate binding enzyme LNQ37_014380 PF01497 Periplasmic binding protein LNQ37_014385 PF05977 Transmembrane secretion effector LNQ37_014390 PF01032 FecCD transport family LNQ37_014395 PF01032 FecCD transport family LNQ37_014400 PF00005 ABC transporter LNQ37_014410 PF00501 AMP-binding enzyme LNQ37_014410 PF13193 AMP-binding enzyme C-terminal domain LNQ37_014410 PF00668 Condensation domain LNQ37_014410 PF00975 Thioesterase domain LNQ37_014410 PF00550 Phosphopantetheine attachment site LNQ37_014415 PF03621 MbtH-like protein LNQ37_014420 PF11806 Domain of unknown function (DUF3327) LNQ37_014420 PF00756 Putative esterase LNQ37_014425 PF07715 TonB-dependent Receptor Plug Domain LNQ37_014425 PF00593 TonB dependent receptor LNQ37_014430 PF08501 Shikimate dehydrogenase substrate binding domain LNQ37_014455 PF04972 BON domain LNQ37_014455 PF13629 Pilus formation protein N terminal region LNQ37_014455 PF00263 Bacterial type II and III secretion system protein LNQ37_014470 PF00437 Type II/IV secretion system protein LNQ37_014505 PF02472 Biopolymer transport protein ExbD/TolR LNQ37_014510 PF01618 MotA/TolQ/ExbB proton channel family LNQ37_014515 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ37_014520 PF09335 SNARE associated Golgi protein LNQ37_014525 PF06719 AraC-type transcriptional regulator N-terminus LNQ37_014525 PF12833 Helix-turn-helix domain LNQ37_014530 PF00465 Iron-containing alcohol dehydrogenase LNQ37_014535 PF00248 Aldo/keto reductase family LNQ37_014540 PF04055 Radical SAM superfamily LNQ37_014540 PF08497 Radical SAM N-terminal LNQ37_014540 PF11842 Domain of unknown function (DUF3362) LNQ37_014545 PF07731 Multicopper oxidase LNQ37_014545 PF07732 Multicopper oxidase LNQ37_014550 PF01553 Acyltransferase LNQ37_014555 PF03989 DNA gyrase C-terminal domain, beta-propeller LNQ37_014555 PF00521 DNA gyrase/topoisomerase IV, subunit A LNQ37_014560 PF02525 Flavodoxin-like fold LNQ37_014565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_014565 PF03466 LysR substrate binding domain LNQ37_014570 PF00204 DNA gyrase B LNQ37_014570 PF00986 DNA gyrase B subunit, carboxyl terminus LNQ37_014570 PF01751 Toprim domain LNQ37_014570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_014575 PF05728 Uncharacterised protein family (UPF0227) LNQ37_014580 PF00149 Calcineurin-like phosphoesterase LNQ37_014585 PF06853 Protein of unknown function (DUF1249) LNQ37_014590 PF00293 NUDIX domain LNQ37_014595 PF02321 Outer membrane efflux protein LNQ37_014600 PF06693 Protein of unknown function (DUF1190) LNQ37_014605 PF03738 Glutathionylspermidine synthase preATP-grasp LNQ37_014610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LNQ37_014615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LNQ37_014620 PF04380 Membrane fusogenic activity LNQ37_014625 PF01467 Cytidylyltransferase-like LNQ37_014625 PF00294 pfkB family carbohydrate kinase LNQ37_014630 PF08335 GlnD PII-uridylyltransferase LNQ37_014630 PF03710 Glutamate-ammonia ligase adenylyltransferase LNQ37_014635 PF01928 CYTH domain LNQ37_014640 PF08239 Bacterial SH3 domain LNQ37_014645 PF01966 HD domain LNQ37_014645 PF01743 Poly A polymerase head domain LNQ37_014645 PF12627 Probable RNA and SrmB- binding site of polymerase A LNQ37_014650 PF02673 Bacitracin resistance protein BacA LNQ37_014655 PF02152 Dihydroneopterin aldolase LNQ37_014660 PF02660 Glycerol-3-phosphate acyltransferase LNQ37_014665 PF00814 Glycoprotease family LNQ37_014670 PF01165 Ribosomal protein S21 LNQ37_014675 PF01807 CHC2 zinc finger LNQ37_014675 PF10410 DnaB-helicase binding domain of primase LNQ37_014675 PF08275 DNA primase catalytic core, N-terminal domain LNQ37_014675 PF08278 DNA primase DnaG DnaB-binding LNQ37_014680 PF04546 Sigma-70, non-essential region LNQ37_014680 PF03979 Sigma-70 factor, region 1.1 LNQ37_014680 PF00140 Sigma-70 factor, region 1.2 LNQ37_014680 PF04542 Sigma-70 region 2 LNQ37_014680 PF04539 Sigma-70 region 3 LNQ37_014680 PF04545 Sigma-70, region 4 LNQ37_014695 PF06755 CbtA_toxin of type IV toxin-antitoxin system LNQ37_014700 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LNQ37_014705 PF04002 RadC-like JAB domain LNQ37_014745 PF00106 short chain dehydrogenase LNQ37_014775 PF04829 Pre-toxin domain with VENN motif LNQ37_014775 PF13332 Hemagglutinin repeat LNQ37_014795 PF13332 Hemagglutinin repeat LNQ37_014795 PF05860 haemagglutination activity domain LNQ37_014795 PF13018 Extended Signal Peptide of Type V secretion system LNQ37_014795 PF04829 Pre-toxin domain with VENN motif LNQ37_014800 PF17287 POTRA domain LNQ37_014800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ37_014800 PF08479 POTRA domain, ShlB-type LNQ37_014805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNQ37_014805 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_014810 PF05175 Methyltransferase small domain LNQ37_014820 PF01863 Protein of unknown function DUF45 LNQ37_014825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNQ37_014830 PF03741 Integral membrane protein TerC family LNQ37_014835 PF00375 Sodium:dicarboxylate symporter family LNQ37_014840 PF10688 Bacterial inner membrane protein LNQ37_014845 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LNQ37_014845 PF08666 SAF domain LNQ37_014850 PF08125 Mannitol dehydrogenase C-terminal domain LNQ37_014850 PF01232 Mannitol dehydrogenase Rossmann domain LNQ37_014855 PF02614 Glucuronate isomerase LNQ37_014860 PF07690 Major Facilitator Superfamily LNQ37_014865 PF07729 FCD domain LNQ37_014865 PF00392 Bacterial regulatory proteins, gntR family LNQ37_014875 PF09335 SNARE associated Golgi protein LNQ37_014880 PF13721 SecD export protein N-terminal TM region LNQ37_014890 PF05957 Bacterial protein of unknown function (DUF883) LNQ37_014895 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LNQ37_014900 PF13997 YqjK-like protein LNQ37_014905 PF07681 DoxX LNQ37_014910 PF03466 LysR substrate binding domain LNQ37_014910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_014915 PF02678 Pirin LNQ37_014915 PF17954 Quercetinase C-terminal cupin domain LNQ37_014930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNQ37_014935 PF04348 LppC putative lipoprotein LNQ37_014940 PF02021 Uncharacterised protein family UPF0102 LNQ37_014945 PF13580 SIS domain LNQ37_014950 PF04972 BON domain LNQ37_014955 PF00912 Transglycosylase LNQ37_014965 PF00072 Response regulator receiver domain LNQ37_014965 PF00989 PAS fold LNQ37_014965 PF01627 Hpt domain LNQ37_014965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_014965 PF18415 Histidine kinase receptor ArcB trans-membrane domain LNQ37_014965 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_014970 PF04055 Radical SAM superfamily LNQ37_014970 PF16199 Radical_SAM C-terminal domain LNQ37_014975 PF00310 Glutamine amidotransferases class-II LNQ37_014975 PF04898 Glutamate synthase central domain LNQ37_014975 PF01645 Conserved region in glutamate synthase LNQ37_014975 PF01493 GXGXG motif LNQ37_014980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LNQ37_014980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_014990 PF04386 Stringent starvation protein B LNQ37_014995 PF02798 Glutathione S-transferase, N-terminal domain LNQ37_014995 PF00043 Glutathione S-transferase, C-terminal domain LNQ37_015000 PF00380 Ribosomal protein S9/S16 LNQ37_015005 PF00572 Ribosomal protein L13 LNQ37_015010 PF03969 AFG1-like ATPase LNQ37_015015 PF06295 Protein of unknown function (DUF1043) LNQ37_015020 PF13180 PDZ domain LNQ37_015020 PF00595 PDZ domain LNQ37_015025 PF13180 PDZ domain LNQ37_015030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNQ37_015035 PF01722 BolA-like protein LNQ37_015040 PF13466 STAS domain LNQ37_015045 PF05494 MlaC protein LNQ37_015050 PF02470 MlaD protein LNQ37_015055 PF02405 Permease MlaE LNQ37_015060 PF00005 ABC transporter LNQ37_015065 PF01699 Sodium/calcium exchanger protein LNQ37_015070 PF00571 CBS domain LNQ37_015070 PF01380 SIS domain LNQ37_015080 PF06835 Lipopolysaccharide-assembly, LptC-related LNQ37_015085 PF03968 OstA-like protein LNQ37_015090 PF12399 Branched-chain amino acid ATP-binding cassette transporter LNQ37_015090 PF00005 ABC transporter LNQ37_015095 PF00309 Sigma-54 factor, Activator interacting domain (AID) LNQ37_015095 PF04552 Sigma-54, DNA binding domain LNQ37_015095 PF04963 Sigma-54 factor, core binding domain LNQ37_015100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LNQ37_015105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNQ37_015110 PF03668 P-loop ATPase protein family LNQ37_015115 PF00381 PTS HPr component phosphorylation site LNQ37_015120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNQ37_015120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNQ37_015125 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LNQ37_015125 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LNQ37_015130 PF01042 Endoribonuclease L-PSP LNQ37_015135 PF11941 Domain of unknown function (DUF3459) LNQ37_015135 PF00128 Alpha amylase, catalytic domain LNQ37_015140 PF00367 phosphotransferase system, EIIB LNQ37_015140 PF02378 Phosphotransferase system, EIIC LNQ37_015145 PF00356 Bacterial regulatory proteins, lacI family LNQ37_015150 PF00690 Cation transporter/ATPase, N-terminus LNQ37_015150 PF00689 Cation transporting ATPase, C-terminus LNQ37_015160 PF14760 Rnk N-terminus LNQ37_015160 PF01272 Transcription elongation factor, GreA/GreB, C-term LNQ37_015165 PF07361 Cytochrome b562 LNQ37_015170 PF01523 Putative modulator of DNA gyrase LNQ37_015175 PF04751 Protein of unknown function (DUF615) LNQ37_015180 PF01337 Barstar (barnase inhibitor) LNQ37_015185 PF00545 ribonuclease LNQ37_015190 PF00171 Aldehyde dehydrogenase family LNQ37_015195 PF04632 Fusaric acid resistance protein family LNQ37_015200 PF13533 Biotin-lipoyl like LNQ37_015205 PF07869 Protein of unknown function (DUF1656) LNQ37_015210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_015210 PF03466 LysR substrate binding domain LNQ37_015215 PF01523 Putative modulator of DNA gyrase LNQ37_015220 PF00795 Carbon-nitrogen hydrolase LNQ37_015225 PF13502 AsmA-like C-terminal region LNQ37_015225 PF13116 Protein of unknown function LNQ37_015230 PF10150 Ribonuclease E/G family LNQ37_015230 PF00575 S1 RNA binding domain LNQ37_015235 PF02545 Maf-like protein LNQ37_015240 PF04093 rod shape-determining protein MreD LNQ37_015245 PF04085 rod shape-determining protein MreC LNQ37_015255 PF00563 EAL domain LNQ37_015255 PF17157 Gammaproteobacterial periplasmic sensor domain LNQ37_015255 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_015260 PF08240 Alcohol dehydrogenase GroES-like domain LNQ37_015260 PF00107 Zinc-binding dehydrogenase LNQ37_015265 PF00174 Oxidoreductase molybdopterin binding domain LNQ37_015270 PF01794 Ferric reductase like transmembrane component LNQ37_015275 PF01220 Dehydroquinase class II LNQ37_015280 PF00364 Biotin-requiring enzyme LNQ37_015285 PF00289 Biotin carboxylase, N-terminal domain LNQ37_015285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNQ37_015285 PF02785 Biotin carboxylase C-terminal domain LNQ37_015290 PF06196 Protein of unknown function (DUF997) LNQ37_015295 PF00474 Sodium:solute symporter family LNQ37_015305 PF01207 Dihydrouridine synthase (Dus) LNQ37_015310 PF02954 Bacterial regulatory protein, Fis family LNQ37_015320 PF03279 Bacterial lipid A biosynthesis acyltransferase LNQ37_015325 PF00484 Carbonic anhydrase LNQ37_015330 PF04172 LrgB-like family LNQ37_015335 PF03788 LrgA family LNQ37_015340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_015340 PF03466 LysR substrate binding domain LNQ37_015345 PF00999 Sodium/hydrogen exchanger family LNQ37_015350 PF00860 Permease family LNQ37_015360 PF00436 Single-strand binding protein family LNQ37_015365 PF17760 UvrA interaction domain LNQ37_015365 PF00005 ABC transporter LNQ37_015365 PF17755 UvrA DNA-binding domain LNQ37_015370 PF04237 YjbR LNQ37_015375 PF00155 Aminotransferase class I and II LNQ37_015380 PF00842 Alanine racemase, C-terminal domain LNQ37_015380 PF01168 Alanine racemase, N-terminal domain LNQ37_015385 PF00772 DnaB-like helicase N terminal domain LNQ37_015385 PF03796 DnaB-like helicase C terminal domain LNQ37_015390 PF00107 Zinc-binding dehydrogenase LNQ37_015390 PF08240 Alcohol dehydrogenase GroES-like domain LNQ37_015395 PF09583 Phage shock protein G (Phageshock_PspG) LNQ37_015400 PF01207 Dihydrouridine synthase (Dus) LNQ37_015405 PF01475 Ferric uptake regulator family LNQ37_015410 PF00717 Peptidase S24-like LNQ37_015410 PF01726 LexA DNA binding domain LNQ37_015415 PF01219 Prokaryotic diacylglycerol kinase LNQ37_015420 PF01553 Acyltransferase LNQ37_015425 PF01040 UbiA prenyltransferase family LNQ37_015430 PF04345 Chorismate lyase LNQ37_015435 PF07148 Maltose operon periplasmic protein precursor (MalM) LNQ37_015440 PF02264 LamB porin LNQ37_015445 PF00005 ABC transporter LNQ37_015445 PF17912 MalK OB fold domain LNQ37_015455 PF01547 Bacterial extracellular solute-binding protein LNQ37_015460 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_015460 PF14785 Maltose transport system permease protein MalF P2 domain LNQ37_015465 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_015470 PF06146 Phosphate-starvation-inducible E LNQ37_015475 PF00342 Phosphoglucose isomerase LNQ37_015480 PF00696 Amino acid kinase family LNQ37_015480 PF01842 ACT domain LNQ37_015485 PF08479 POTRA domain, ShlB-type LNQ37_015485 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LNQ37_015485 PF17287 POTRA domain LNQ37_015490 PF13332 Hemagglutinin repeat LNQ37_015490 PF05860 haemagglutination activity domain LNQ37_015495 PF00872 Transposase, Mutator family LNQ37_015500 PF09134 Invasin, domain 3 LNQ37_015500 PF07979 Intimin C-type lectin domain LNQ37_015500 PF11924 Inverse autotransporter, beta-domain LNQ37_015500 PF02369 Bacterial Ig-like domain (group 1) LNQ37_015510 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LNQ37_015520 PF16450 Proteasomal ATPase OB C-terminal domain LNQ37_015520 PF17758 Proteasomal ATPase OB N-terminal domain LNQ37_015520 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_015600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_015600 PF03466 LysR substrate binding domain LNQ37_015615 PF02310 B12 binding domain LNQ37_015615 PF02607 B12 binding domain LNQ37_015615 PF02965 Vitamin B12 dependent methionine synthase, activation domain LNQ37_015615 PF02574 Homocysteine S-methyltransferase LNQ37_015615 PF00809 Pterin binding enzyme LNQ37_015620 PF01614 Bacterial transcriptional regulator LNQ37_015620 PF09339 IclR helix-turn-helix domain LNQ37_015625 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LNQ37_015630 PF00463 Isocitrate lyase family LNQ37_015635 PF01274 Malate synthase LNQ37_015640 PF04204 Homoserine O-succinyltransferase LNQ37_015680 PF01808 AICARFT/IMPCHase bienzyme LNQ37_015680 PF02142 MGS-like domain LNQ37_015685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LNQ37_015685 PF02844 Phosphoribosylglycinamide synthetase, N domain LNQ37_015685 PF02843 Phosphoribosylglycinamide synthetase, C domain LNQ37_015690 PF07356 Protein of unknown function (DUF1481) LNQ37_015695 PF00216 Bacterial DNA-binding protein LNQ37_015700 PF04222 Protein of unknown function (DUF416) LNQ37_015705 PF04493 Endonuclease V LNQ37_015710 PF01208 Uroporphyrinogen decarboxylase (URO-D) LNQ37_015715 PF09297 NADH pyrophosphatase zinc ribbon domain LNQ37_015715 PF00293 NUDIX domain LNQ37_015720 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LNQ37_015725 PF13667 ThiC-associated domain LNQ37_015725 PF01964 Radical SAM ThiC family LNQ37_015730 PF02581 Thiamine monophosphate synthase LNQ37_015735 PF00899 ThiF family LNQ37_015740 PF02597 ThiS family LNQ37_015745 PF05690 Thiazole biosynthesis protein ThiG LNQ37_015750 PF06968 Biotin and Thiamin Synthesis associated domain LNQ37_015750 PF04055 Radical SAM superfamily LNQ37_015755 PF05000 RNA polymerase Rpb1, domain 4 LNQ37_015755 PF04997 RNA polymerase Rpb1, domain 1 LNQ37_015755 PF00623 RNA polymerase Rpb1, domain 2 LNQ37_015755 PF04998 RNA polymerase Rpb1, domain 5 LNQ37_015755 PF04983 RNA polymerase Rpb1, domain 3 LNQ37_015760 PF04563 RNA polymerase beta subunit LNQ37_015760 PF04561 RNA polymerase Rpb2, domain 2 LNQ37_015760 PF04560 RNA polymerase Rpb2, domain 7 LNQ37_015760 PF10385 RNA polymerase beta subunit external 1 domain LNQ37_015760 PF04565 RNA polymerase Rpb2, domain 3 LNQ37_015760 PF00562 RNA polymerase Rpb2, domain 6 LNQ37_015765 PF00542 Ribosomal protein L7/L12 C-terminal domain LNQ37_015765 PF16320 Ribosomal protein L7/L12 dimerisation domain LNQ37_015770 PF00466 Ribosomal protein L10 LNQ37_015775 PF00687 Ribosomal protein L1p/L10e family LNQ37_015780 PF00298 Ribosomal protein L11, RNA binding domain LNQ37_015780 PF03946 Ribosomal protein L11, N-terminal domain LNQ37_015785 PF00467 KOW motif LNQ37_015785 PF02357 Transcription termination factor nusG LNQ37_015790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LNQ37_015795 PF00009 Elongation factor Tu GTP binding domain LNQ37_015795 PF03144 Elongation factor Tu domain 2 LNQ37_015795 PF03143 Elongation factor Tu C-terminal domain LNQ37_015820 PF00485 Phosphoribulokinase / Uridine kinase family LNQ37_015825 PF02237 Biotin protein ligase C terminal domain LNQ37_015825 PF08279 HTH domain LNQ37_015825 PF03099 Biotin/lipoate A/B protein ligase family LNQ37_015830 PF01565 FAD binding domain LNQ37_015830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LNQ37_015855 PF12724 Flavodoxin domain LNQ37_015860 PF02386 Cation transport protein LNQ37_015865 PF09186 Domain of unknown function (DUF1949) LNQ37_015865 PF01205 Uncharacterized protein family UPF0029 LNQ37_015870 PF00557 Metallopeptidase family M24 LNQ37_015875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNQ37_015875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNQ37_015875 PF00378 Enoyl-CoA hydratase/isomerase LNQ37_015880 PF02803 Thiolase, C-terminal domain LNQ37_015880 PF00108 Thiolase, N-terminal domain LNQ37_015885 PF00970 Oxidoreductase FAD-binding domain LNQ37_015885 PF00175 Oxidoreductase NAD-binding domain LNQ37_015890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LNQ37_015900 PF02357 Transcription termination factor nusG LNQ37_015905 PF00490 Delta-aminolevulinic acid dehydratase LNQ37_015910 PF01026 TatD related DNase LNQ37_015915 PF00902 Sec-independent protein translocase protein (TatC) LNQ37_015925 PF02416 mttA/Hcf106 family LNQ37_015930 PF03109 ABC1 family LNQ37_015935 PF02036 SCP-2 sterol transfer family LNQ37_015940 PF01209 ubiE/COQ5 methyltransferase family LNQ37_015945 PF02646 RmuC family LNQ37_015950 PF09335 SNARE associated Golgi protein LNQ37_015955 PF13722 5TM C-terminal transporter carbon starvation CstA LNQ37_015955 PF02554 Carbon starvation protein CstA LNQ37_015965 PF01048 Phosphorylase superfamily LNQ37_015970 PF01738 Dienelactone hydrolase family LNQ37_015975 PF01717 Cobalamin-independent synthase, Catalytic domain LNQ37_015975 PF08267 Cobalamin-independent synthase, N-terminal domain LNQ37_015980 PF03466 LysR substrate binding domain LNQ37_015980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_015985 PF00892 EamA-like transporter family LNQ37_015995 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ37_016000 PF17912 MalK OB fold domain LNQ37_016000 PF00005 ABC transporter LNQ37_016005 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_016010 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_016015 PF13416 Bacterial extracellular solute-binding protein LNQ37_016055 PF00005 ABC transporter LNQ37_016060 PF00005 ABC transporter LNQ37_016060 PF12399 Branched-chain amino acid ATP-binding cassette transporter LNQ37_016065 PF02653 Branched-chain amino acid transport system / permease component LNQ37_016065 PF11862 Domain of unknown function (DUF3382) LNQ37_016070 PF02653 Branched-chain amino acid transport system / permease component LNQ37_016075 PF13458 Periplasmic binding protein LNQ37_016080 PF12568 Acetyltransferase (GNAT) domain, PanZ LNQ37_016085 PF02595 Glycerate kinase family LNQ37_016090 PF02447 GntP family permease LNQ37_016095 PF05651 Putative sugar diacid recognition LNQ37_016095 PF17853 GGDEF-like domain LNQ37_016095 PF13556 PucR C-terminal helix-turn-helix domain LNQ37_016100 PF00140 Sigma-70 factor, region 1.2 LNQ37_016100 PF04545 Sigma-70, region 4 LNQ37_016100 PF04542 Sigma-70 region 2 LNQ37_016105 PF18075 FtsX extracellular domain LNQ37_016105 PF02687 FtsX-like permease family LNQ37_016110 PF00005 ABC transporter LNQ37_016115 PF02881 SRP54-type protein, helical bundle domain LNQ37_016115 PF00448 SRP54-type protein, GTPase domain LNQ37_016115 PF02881 SRP54-type protein, helical bundle domain LNQ37_016115 PF00448 SRP54-type protein, GTPase domain LNQ37_016125 PF06611 Protein of unknown function (DUF1145) LNQ37_016140 PF07947 YhhN family LNQ37_016145 PF00403 Heavy-metal-associated domain LNQ37_016150 PF01206 Sulfurtransferase TusA LNQ37_016155 PF02592 Putative vitamin uptake transporter LNQ37_016160 PF08786 DcrB LNQ37_016165 PF02754 Cysteine-rich domain LNQ37_016165 PF13183 4Fe-4S dicluster domain LNQ37_016170 PF00890 FAD binding domain LNQ37_016175 PF04324 BFD-like [2Fe-2S] binding domain LNQ37_016175 PF01266 FAD dependent oxidoreductase LNQ37_016185 PF07690 Major Facilitator Superfamily LNQ37_016190 PF03009 Glycerophosphoryl diester phosphodiesterase family LNQ37_016200 PF12146 Serine aminopeptidase, S33 LNQ37_016205 PF01810 LysE type translocator LNQ37_016210 PF00271 Helicase conserved C-terminal domain LNQ37_016210 PF00570 HRDC domain LNQ37_016210 PF16124 RecQ zinc-binding LNQ37_016210 PF09382 RQC domain LNQ37_016210 PF00270 DEAD/DEAH box helicase LNQ37_016215 PF02253 Phospholipase A1 LNQ37_016220 PF03061 Thioesterase superfamily LNQ37_016225 PF00892 EamA-like transporter family LNQ37_016230 PF01544 CorA-like Mg2+ transporter protein LNQ37_016240 PF09370 Phosphoenolpyruvate hydrolase-like LNQ37_016255 PF00580 UvrD/REP helicase N-terminal domain LNQ37_016255 PF13361 UvrD-like helicase C-terminal domain LNQ37_016260 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_016265 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_016265 PF00589 Phage integrase family LNQ37_016270 PF04340 Protein of unknown function, DUF484 LNQ37_016275 PF01678 Diaminopimelate epimerase LNQ37_016280 PF13627 Prokaryotic lipoprotein-attachment site LNQ37_016285 PF01491 Frataxin-like domain LNQ37_016290 PF12633 Adenylate cyclase NT domain LNQ37_016290 PF01295 Adenylate cyclase, class-I LNQ37_016295 PF03900 Porphobilinogen deaminase, C-terminal domain LNQ37_016295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LNQ37_016300 PF02602 Uroporphyrinogen-III synthase HemD LNQ37_016305 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LNQ37_016310 PF07219 HemY protein N-terminus LNQ37_016310 PF07719 Tetratricopeptide repeat LNQ37_016335 PF00324 Amino acid permease LNQ37_016340 PF03808 Glycosyl transferase WecB/TagA/CpsF family LNQ37_016345 PF06899 WzyE protein, O-antigen assembly polymerase LNQ37_016350 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LNQ37_016355 PF01943 Polysaccharide biosynthesis protein LNQ37_016360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNQ37_016370 PF00483 Nucleotidyl transferase LNQ37_016375 PF16363 GDP-mannose 4,6 dehydratase LNQ37_016380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNQ37_016380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNQ37_016380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNQ37_016385 PF02350 UDP-N-acetylglucosamine 2-epimerase LNQ37_016390 PF02706 Chain length determinant protein LNQ37_016395 PF00953 Glycosyl transferase family 4 LNQ37_016400 PF07497 Rho termination factor, RNA-binding domain LNQ37_016400 PF07498 Rho termination factor, N-terminal domain LNQ37_016400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ37_016405 PF00085 Thioredoxin LNQ37_016410 PF00270 DEAD/DEAH box helicase LNQ37_016410 PF00271 Helicase conserved C-terminal domain LNQ37_016415 PF02541 Ppx/GppA phosphatase family LNQ37_016420 PF13361 UvrD-like helicase C-terminal domain LNQ37_016420 PF00580 UvrD/REP helicase N-terminal domain LNQ37_016430 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LNQ37_016430 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LNQ37_016435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_016435 PF03466 LysR substrate binding domain LNQ37_016440 PF18416 N-acetylglucosamine binding protein domain 2 LNQ37_016440 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNQ37_016445 PF00585 C-terminal regulatory domain of Threonine dehydratase LNQ37_016445 PF00291 Pyridoxal-phosphate dependent enzyme LNQ37_016450 PF00920 Dehydratase family LNQ37_016455 PF01063 Amino-transferase class IV LNQ37_016465 PF00205 Thiamine pyrophosphate enzyme, central domain LNQ37_016465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNQ37_016465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNQ37_016470 PF08046 IlvGEDA operon leader peptide LNQ37_016475 PF01078 Magnesium chelatase, subunit ChlI LNQ37_016475 PF13335 Magnesium chelatase, subunit ChlI C-terminal LNQ37_016480 PF04219 Protein of unknown function, DUF LNQ37_016485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_016485 PF03466 LysR substrate binding domain LNQ37_016530 PF01177 Asp/Glu/Hydantoin racemase LNQ37_016535 PF07715 TonB-dependent Receptor Plug Domain LNQ37_016535 PF00593 TonB dependent receptor LNQ37_016540 PF05958 tRNA (Uracil-5-)-methyltransferase LNQ37_016545 PF07226 Protein of unknown function (DUF1422) LNQ37_016550 PF00440 Bacterial regulatory proteins, tetR family LNQ37_016555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ37_016555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_016560 PF03466 LysR substrate binding domain LNQ37_016560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_016565 PF08534 Redoxin LNQ37_016565 PF00462 Glutaredoxin LNQ37_016570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNQ37_016570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNQ37_016590 PF00529 HlyD membrane-fusion protein of T1SS LNQ37_016595 PF00005 ABC transporter LNQ37_016595 PF00664 ABC transporter transmembrane region LNQ37_016605 PF00593 TonB dependent receptor LNQ37_016605 PF07715 TonB-dependent Receptor Plug Domain LNQ37_016610 PF00206 Lyase LNQ37_016610 PF14698 Argininosuccinate lyase C-terminal LNQ37_016615 PF00764 Arginosuccinate synthase LNQ37_016620 PF00696 Amino acid kinase family LNQ37_016625 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNQ37_016625 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNQ37_016630 PF07687 Peptidase dimerisation domain LNQ37_016630 PF01546 Peptidase family M20/M25/M40 LNQ37_016635 PF00311 Phosphoenolpyruvate carboxylase LNQ37_016645 PF02219 Methylenetetrahydrofolate reductase LNQ37_016665 PF00696 Amino acid kinase family LNQ37_016665 PF00742 Homoserine dehydrogenase LNQ37_016665 PF03447 Homoserine dehydrogenase, NAD binding domain LNQ37_016670 PF01053 Cys/Met metabolism PLP-dependent enzyme LNQ37_016675 PF01340 Met Apo-repressor, MetJ LNQ37_016680 PF01197 Ribosomal protein L31 LNQ37_016685 PF17764 3′ DNA-binding domain (3′BD) LNQ37_016685 PF00270 DEAD/DEAH box helicase LNQ37_016685 PF18074 Primosomal protein N C-terminal domain LNQ37_016685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LNQ37_016685 PF00271 Helicase conserved C-terminal domain LNQ37_016690 PF00356 Bacterial regulatory proteins, lacI family LNQ37_016695 PF05036 Sporulation related domain LNQ37_016700 PF00227 Proteasome subunit LNQ37_016705 PF10431 C-terminal, D2-small domain, of ClpB protein LNQ37_016705 PF00004 ATPase family associated with various cellular activities (AAA) LNQ37_016705 PF07724 AAA domain (Cdc48 subfamily) LNQ37_016710 PF01040 UbiA prenyltransferase family LNQ37_016715 PF03737 Aldolase/RraA LNQ37_016720 PF06005 Cell division protein ZapB LNQ37_016725 PF00230 Major intrinsic protein LNQ37_016730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNQ37_016730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNQ37_016735 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LNQ37_016740 PF07690 Major Facilitator Superfamily LNQ37_016745 PF00970 Oxidoreductase FAD-binding domain LNQ37_016745 PF00175 Oxidoreductase NAD-binding domain LNQ37_016750 PF05656 Protein of unknown function (DUF805) LNQ37_016755 PF07305 Protein of unknown function (DUF1454) LNQ37_016760 PF00121 Triosephosphate isomerase LNQ37_016770 PF00365 Phosphofructokinase LNQ37_016775 PF01545 Cation efflux family LNQ37_016775 PF16916 Dimerisation domain of Zinc Transporter LNQ37_016780 PF07813 LTXXQ motif family protein LNQ37_016785 PF00486 Transcriptional regulatory protein, C terminal LNQ37_016785 PF00072 Response regulator receiver domain LNQ37_016790 PF00672 HAMP domain LNQ37_016790 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_016790 PF16527 Two-component sensor protein CpxA, periplasmic domain LNQ37_016790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_016795 PF00588 SpoU rRNA Methylase family LNQ37_016800 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_016800 PF06426 Serine acetyltransferase, N-terminal LNQ37_016805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LNQ37_016805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LNQ37_016810 PF02556 Preprotein translocase subunit SecB LNQ37_016815 PF00462 Glutaredoxin LNQ37_016820 PF00581 Rhodanese-like domain LNQ37_016825 PF01676 Metalloenzyme superfamily LNQ37_016825 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LNQ37_016830 PF01551 Peptidase family M23 LNQ37_016835 PF04748 Divergent polysaccharide deacetylase LNQ37_016840 PF08240 Alcohol dehydrogenase GroES-like domain LNQ37_016840 PF00107 Zinc-binding dehydrogenase LNQ37_016845 PF00155 Aminotransferase class I and II LNQ37_016850 PF01370 NAD dependent epimerase/dehydratase family LNQ37_016855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ37_016860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNQ37_016865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LNQ37_016870 PF00535 Glycosyl transferase family 2 LNQ37_016875 PF01467 Cytidylyltransferase-like LNQ37_016880 PF06827 Zinc finger found in FPG and IleRS LNQ37_016880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LNQ37_016880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LNQ37_016885 PF00471 Ribosomal protein L33 LNQ37_016890 PF00830 Ribosomal L28 family LNQ37_016895 PF04002 RadC-like JAB domain LNQ37_016900 PF02441 Flavoprotein LNQ37_016900 PF04127 DNA / pantothenate metabolism flavoprotein LNQ37_016905 PF00692 dUTPase LNQ37_016910 PF00440 Bacterial regulatory proteins, tetR family LNQ37_016915 PF00156 Phosphoribosyl transferase domain LNQ37_016920 PF03725 3' exoribonuclease family, domain 2 LNQ37_016920 PF01138 3' exoribonuclease family, domain 1 LNQ37_016925 PF03755 YicC-like family, N-terminal region LNQ37_016925 PF08340 Domain of unknown function (DUF1732) LNQ37_016935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNQ37_016935 PF03466 LysR substrate binding domain LNQ37_016940 PF00990 Diguanylate cyclase, GGDEF domain LNQ37_016940 PF13426 PAS domain LNQ37_016940 PF00563 EAL domain LNQ37_016945 PF00378 Enoyl-CoA hydratase/isomerase LNQ37_016950 PF07662 Na+ dependent nucleoside transporter C-terminus LNQ37_016950 PF01773 Na+ dependent nucleoside transporter N-terminus LNQ37_016950 PF07670 Nucleoside recognition LNQ37_016965 PF03458 UPF0126 domain LNQ37_016970 PF03120 NAD-dependent DNA ligase OB-fold domain LNQ37_016970 PF01653 NAD-dependent DNA ligase adenylation domain LNQ37_016975 PF00625 Guanylate kinase LNQ37_016980 PF01192 RNA polymerase Rpb6 LNQ37_016985 PF13291 ACT domain LNQ37_016985 PF04607 Region found in RelA / SpoT proteins LNQ37_016985 PF02824 TGS domain LNQ37_016990 PF00588 SpoU rRNA Methylase family LNQ37_016990 PF12105 SpoU, rRNA methylase, C-terminal LNQ37_016995 PF17191 RecG wedge domain LNQ37_016995 PF00271 Helicase conserved C-terminal domain LNQ37_016995 PF00270 DEAD/DEAH box helicase LNQ37_017000 PF03616 Sodium/glutamate symporter LNQ37_017005 PF00860 Permease family LNQ37_017010 PF05170 AsmA family LNQ37_017015 PF09500 Putative thioesterase (yiiD_Cterm) LNQ37_017015 PF00583 Acetyltransferase (GNAT) family LNQ37_017020 PF02580 D-Tyr-tRNA(Tyr) deacylase LNQ37_017025 PF03631 Virulence factor BrkB LNQ37_017030 PF13419 Haloacid dehalogenase-like hydrolase LNQ37_017035 PF00679 Elongation factor G C-terminus LNQ37_017035 PF00009 Elongation factor Tu GTP binding domain LNQ37_017035 PF03144 Elongation factor Tu domain 2 LNQ37_017040 PF00120 Glutamine synthetase, catalytic domain LNQ37_017040 PF03951 Glutamine synthetase, beta-Grasp domain LNQ37_017045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNQ37_017045 PF00512 His Kinase A (phospho-acceptor) domain LNQ37_017045 PF00989 PAS fold LNQ37_017050 PF00072 Response regulator receiver domain LNQ37_017050 PF02954 Bacterial regulatory protein, Fis family LNQ37_017050 PF00158 Sigma-54 interaction domain LNQ37_017055 PF04055 Radical SAM superfamily LNQ37_017055 PF06969 HemN C-terminal domain LNQ37_017060 PF04220 Der GTPase activator (YihI) LNQ37_017065 PF01926 50S ribosome-binding GTPase LNQ37_017075 PF00476 DNA polymerase family A LNQ37_017075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNQ37_017075 PF01367 5'-3' exonuclease, C-terminal SAM fold LNQ37_017075 PF01612 3'-5' exonuclease LNQ37_017080 PF01323 DSBA-like thioredoxin domain LNQ37_017085 PF01636 Phosphotransferase enzyme family LNQ37_017090 PF06288 Protein of unknown function (DUF1040) LNQ37_017095 PF12804 MobA-like NTP transferase domain LNQ37_017100 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LNQ37_017125 PF07729 FCD domain LNQ37_017125 PF00392 Bacterial regulatory proteins, gntR family LNQ37_017130 PF00356 Bacterial regulatory proteins, lacI family LNQ37_017135 PF00294 pfkB family carbohydrate kinase LNQ37_017140 PF13407 Periplasmic binding protein domain LNQ37_017145 PF02653 Branched-chain amino acid transport system / permease component LNQ37_017150 PF00005 ABC transporter LNQ37_017155 PF05025 RbsD / FucU transport protein family LNQ37_017160 PF02705 K+ potassium transporter LNQ37_017165 PF12592 Protein of unknown function (DUF3763) LNQ37_017165 PF07728 AAA domain (dynein-related subfamily) LNQ37_017165 PF17868 AAA lid domain LNQ37_017170 PF05762 VWA domain containing CoxE-like protein LNQ37_017180 PF03590 Aspartate-ammonia ligase LNQ37_017185 PF01037 Lrp/AsnC ligand binding domain LNQ37_017190 PF00258 Flavodoxin LNQ37_017195 PF01134 Glucose inhibited division protein A LNQ37_017195 PF13932 GidA associated domain LNQ37_017200 PF02527 rRNA small subunit methyltransferase G LNQ37_017205 PF03899 ATP synthase I chain LNQ37_017210 PF00119 ATP synthase A chain LNQ37_017215 PF00137 ATP synthase subunit C LNQ37_017220 PF00430 ATP synthase B/B' CF(0) LNQ37_017225 PF00213 ATP synthase delta (OSCP) subunit LNQ37_017230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ37_017230 PF00306 ATP synthase alpha/beta chain, C terminal domain LNQ37_017230 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ37_017235 PF00231 ATP synthase LNQ37_017240 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNQ37_017240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNQ37_017245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LNQ37_017245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LNQ37_017250 PF12804 MobA-like NTP transferase domain LNQ37_017250 PF00132 Bacterial transferase hexapeptide (six repeats) LNQ37_017255 PF01380 SIS domain LNQ37_017260 PF12849 PBP superfamily domain LNQ37_017265 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_017270 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_017275 PF00005 ABC transporter LNQ37_017280 PF01895 PhoU domain LNQ37_017285 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNQ37_017290 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_017295 PF00528 Binding-protein-dependent transport system inner membrane component LNQ37_017300 PF00860 Permease family LNQ37_017305 PF00672 HAMP domain LNQ37_017305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNQ37_017305 PF02203 Tar ligand binding domain homologue LNQ37_017315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNQ37_017315 PF02753 Pili assembly chaperone PapD, C-terminal domain LNQ37_017320 PF00577 Outer membrane usher protein LNQ37_017320 PF13953 PapC C-terminal domain LNQ37_017320 PF13954 PapC N-terminal domain LNQ37_017330 PF01926 50S ribosome-binding GTPase LNQ37_017330 PF12631 MnmE helical domain LNQ37_017330 PF10396 GTP-binding protein TrmE N-terminus LNQ37_017335 PF14849 YidC periplasmic domain LNQ37_017335 PF02096 60Kd inner membrane protein LNQ37_017340 PF01809 Putative membrane protein insertion efficiency factor LNQ37_017345 PF00825 Ribonuclease P LNQ37_017350 PF00468 Ribosomal protein L34 LNQ37_017440 PF02899 Phage integrase, N-terminal SAM-like domain LNQ37_017440 PF00589 Phage integrase family LNQ37_017450 PF13614 AAA domain LNQ37_017590 PF05321 Haemolysin expression modulating protein LNQ37_017620 PF13438 Domain of unknown function (DUF4113) LNQ37_017620 PF00817 impB/mucB/samB family LNQ37_017620 PF11799 impB/mucB/samB family C-terminal domain LNQ37_017625 PF00717 Peptidase S24-like LNQ37_017650 PF05321 Haemolysin expression modulating protein LNQ37_017715 PF13362 Toprim domain LNQ37_017715 PF08401 Domain of unknown function (DUF1738) LNQ37_017715 PF18818 Metallopeptidase superfamily domain LNQ37_017725 PF01131 DNA topoisomerase LNQ37_017725 PF01751 Toprim domain LNQ37_017735 PF01396 Topoisomerase DNA binding C4 zinc finger LNQ37_017735 PF01131 DNA topoisomerase LNQ37_017735 PF01751 Toprim domain LNQ37_017765 PF08401 Domain of unknown function (DUF1738) LNQ37_017765 PF18818 Metallopeptidase superfamily domain LNQ37_017765 PF13362 Toprim domain LNQ37_017770 PF00589 Phage integrase family LNQ37_017775 PF04917 Bacterial shufflon protein, N-terminal constant region LNQ37_017780 PF00437 Type II/IV secretion system protein LNQ37_017795 PF00437 Type II/IV secretion system protein LNQ37_017810 PF00263 Bacterial type II and III secretion system protein LNQ37_017810 PF07655 Secretin N-terminal domain LNQ37_017885 PF01051 Initiator Replication protein LNQ37_017930 PF00816 H-NS histone family LNQ37_017935 PF01580 FtsK/SpoIIIE family LNQ37_018000 PF00437 Type II/IV secretion system protein